RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGSF8 (Homo sapiens)

Ensembl gene IDs: ENSG00000162729

Ensembl transcript IDs: ENST00000314485.12, ENST00000368086.5, ENST00000448417.1, ENST00000460351.1, ENST00000614243.4

Found 299 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGTGGACAGAGGGAGAGGGTGTCCAGGCAACCAGAGGAGGGCTTaGAGCTGGGCCGGAAGACAGTCGACACCTGCAAGACCTGGGGAG +
Preference number: 1 (lower is better)
Translates to: RVDRGRGCPGNQRRA*SWAGRQSTPARPGE
Trigger: CTCCCCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCCAAGCCCTCCTCTGGTTGCCTGGACACCCTCTCCCTCTGTCCACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314485.12
ENST00000614243.4
3UTR CCA 90 bp GACAGAGGGAGAGGGTGTCCAGGCAACCAGAGGAGGGCTTGGAGCTaGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCC +
Preference number: 1 (lower is better)
Translates to: DRGRGCPGNQRRAWS*AGRQSTPARPEKGA
Trigger: GGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCCAAGCCCTCCTCTGGTTGCCTGGACACCCTCTCCCTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368086.5
3UTR CCA 90 bp AGAGTGGACAGAGGGAGAGGGTGTCCAGGCAACCAGAGGAGGGCTTaGAGCTGGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAG +
Preference number: 1 (lower is better)
Translates to: RVDRGRGCPGNQRRA*SWAGRQSTPARPEK
Trigger: CTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCCAAGCCCTCCTCTGGTTGCCTGGACACCCTCTCCCTCTGTCCACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368086.5
3UTR CCA 90 bp TCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTaGACAGAGGGAGAGGGTGTCCAGGCAACCAGAGGAGGGCTTGGA +
Preference number: 1 (lower is better)
Translates to: SPILGSGRSNKLKEE*TEGEGVQATRGGLG
Trigger: TCCAAGCCCTCCTCTGGTTGCCTGGACACCCTCTCCCTCTGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
3UTR CAA 90 bp AAGAGTGGACAGAGGGAGAGGGTGTCCAGGCAACCAGAGGAGGGCTaGGAGCTGGGCCGGAAGACAGTCGACACCTGCAAGACCTGGGGA +
Preference number: 2 (lower is better)
Translates to: KSGQRERVSRQPEEG*ELGRKTVDTCKTWG
Trigger: TCCCCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCCAAGCCCTCCTCTGGTTGCCTGGACACCCTCTCCCTCTGTCCACTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314485.12
ENST00000614243.4
3UTR-3UTR CCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGAGGAGGGCTTGGAGCTaGGCCGGAAGACAGTCGACA +
Preference number: 2 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKRRAWS*AGRQST
Trigger: TGTCGACTGTCTTCCGGCCCAGCTCCAAGCCCTCCT...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
3UTR-3UTR CCA 90 bp TTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAAGGAGGGCTTGGAGCTaGGCCGGAAGACAGTCGACA +
Preference number: 2 (lower is better)
Translates to: FQDRKWPPYRIPKRSRTERRAWS*AGRQST
Trigger: TGTCGACTGTCTTCCGGCCCAGCTCCAAGCCCTCCT...TTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
3UTR-3UTR GCA 90 bp CAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGCAAGACAGTCGACACCTaGAAGACCTGGGGAGTAAGG +
Preference number: 2 (lower is better)
Translates to: QDRKWPPYRIPKRSRTEGKTVDT*KTWGVR
Trigger: CCTTACTCCCCAGGTCTTGCAGGTGTCGACTGTCTT...GCCTTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314485.12
ENST00000614243.4
3UTR-3UTR TCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCGACACCTGCAAGACCTaGAAAGGGTGCCCGGTGTGG +
Preference number: 2 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSDTCKT*KGCPVW
Trigger: CCACACCGGGCACCCTTTTCAGGTCTTGCAGGTGTC...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368086.5
3UTR-3UTR CCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAAGGAGGGCTTGGAGCTaGGCCGGAAGACAGTCGACA +
Preference number: 2 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRRRAWS*AGRQST
Trigger: TGTCGACTGTCTTCCGGCCCAGCTCCAAGCCCTCCT...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
3UTR-3UTR GCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCAAGACAGTCGACACCTaGAAGACCTGGGGAGTAAGG +
Preference number: 2 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSKTVDT*KTWGVR
Trigger: CCTTACTCCCCAGGTCTTGCAGGTGTCGACTGTCTT...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314485.12
ENST00000614243.4
3UTR-3UTR CCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCGCACGTCTCCCATTCTaGGTAGTGGGAGGTCAAATA +
Preference number: 2 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSARLPF*VVGGQI
Trigger: TATTTGACCTCCCACTACCCAGAATGGGAGACGTGC...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
3UTR-3UTR CCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGCACGTCTCCCATTCTaGGTAGTGGGAGGTCAAATA +
Preference number: 2 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRARLPF*VVGGQI
Trigger: TATTTGACCTCCCACTACCCAGAATGGGAGACGTGC...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
3UTR CCA 72 bp CAGAAGGCCAGAGGGAGGGGCTTGGGAGGGAAGGAGTaGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGT +
Preference number: 3 (lower is better)
Translates to: QKARGRGLGGKE*GRGGTSPILGS
Trigger: ACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCACTCCTTCCCTCCCAAGCCCCTCCCTCTGGCCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp GGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGTGTGGGCGCCCTGAGCGGGCACTaGCCGCCTGGTACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GPEDSRHLQDLKRVPGVGALSGH*PPGTSC
Trigger: ACAGCTGGTACCAGGCGGGCAGTGCCCGCTCAGGGC...GCCCACACCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR TCA 90 bp GGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGTGTGGGCGGGCAGGGACAGAGCTaGGCTCTCCGTCCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GPEDSRHLQDLKRVPGVGGQGQS*ALRPLV
Trigger: GACCAGAGGACGGAGAGCTCAGCTCTGTCCCTGCCC...GCCCACACCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR TCA 90 bp GGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGTGTGGGCGTGCGCCGAGCGAGCTaGACTGGAGCTGCCGAATCC +
Preference number: 4 (lower is better)
Translates to: GPEDSRHLQDLKRVPGVGVRRAS*TGAAES
Trigger: GGATTCGGCAGCTCCAGTTCAGCTCGCTCGGCGCAC...GCCCACACCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR GCA 90 bp GGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGTGTGGGCCCGGCATCCTGGGCCTaGAGGCGGGCAATCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GPEDSRHLQDLKRVPGVGPASWA*RRAILS
Trigger: GCTCAAGATTGCCCGCCTGCAGGCCCAGGATGCCGG...GCCCACACCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR CCA 90 bp AGGGCTTGGAGCTGGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGGATGGCGCGGGTTCTaGGGGGCCGGAAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RAWSWAGRQSTPARPEKGGWRGF*GAGRVG
Trigger: CCCCACCCTTCCGGCCCCCCAGAACCCGCGCCATCC...ACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCCAAGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR GCA 90 bp TGGAGCTGGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGAGCCAGGGCCCAGGCTaGCCACACCCTCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: WSWAGRQSTPARPEKGARSQGPG*PHPLCP
Trigger: TGGACACAGAGGGTGTGGGCAGCCTGGGCCCTGGCT...CCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR GCA 90 bp GGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGTGTGGGCCCCCGCGGTACACTGTaGCTCCTGCTAGCCATGCCA +
Preference number: 4 (lower is better)
Translates to: GPEDSRHLQDLKRVPGVGPRGTL*LLLAMP
Trigger: TGGCATGGCTAGCAGGAGGCACAGTGTACCGCGGGG...GCCCACACCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR CCA 90 bp GAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGTGTGGGCTGGGGAGCCGGGAACGGGCACTaGCTGCTTCACGAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: EDSRHLQDLKRVPGVGWGAGNGH*LLHEAG
Trigger: CCCGGCTTCGTGAAGCAGCCAGTGCCCGTTCCCGGC...TCCCCAGCCCACACCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR CCA 90 bp GGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGTGTGGGCCCGAGCGAGCTGAACTaGAGCTGCCGAATCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GPEDSRHLQDLKRVPGVGPSELN*SCRIPS
Trigger: GGAGGGGATTCGGCAGCTCCAGTTCAGCTCGCTCGG...GCCCACACCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR CCA 90 bp GGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGTGTGGGCGTGCCCGGTGTGGGCTaGGGAGTAAGGGATCACCGT +
Preference number: 4 (lower is better)
Translates to: GPEDSRHLQDLKRVPGVGVPGVG*GVRDHR
Trigger: ACGGTGATCCCTTACTCCCCAGCCCACACCGGGCAC...GCCCACACCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR TCA 90 bp AGGGCTTGGAGCTGGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTCCACCAGCTCTACGCTaGCAGGGCCTCCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RAWSWAGRQSTPARPEKGPPALR*QGLLQA
Trigger: GGCCTGGAGGAGGCCCTGTCAGCGTAGAGCTGGTGG...ACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCCAAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR GCA 90 bp TGGAGCTGGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGTGTAGGCGCTGCACCTaGACCTCACCCGCCACCACT +
Preference number: 4 (lower is better)
Translates to: WSWAGRQSTPARPEKGARCRRCT*TSPATT
Trigger: AGTGGTGGCGGGTGAGGTGCAGGTGCAGCGCCTACA...CCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR GCA 90 bp GGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGTGTGGGCGATCGGTCCCTTCCTTaGCCAGACGAAGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: GPEDSRHLQDLKRVPGVGDRSLP*PDEAPL
Trigger: CAGGGGAGCTTCGTCTGGGCAAGGAAGGGACCGATC...GCCCACACCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR CCA 90 bp GGAGCTGGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGTTTCCAAGGGCTCCCCTaGGCCGATCCGACGTTCACC +
Preference number: 4 (lower is better)
Translates to: GAGPEDSRHLQDLKRVPGFQGLP*ADPTFT
Trigger: GGTGAACGTCGGATCGGCCCAGGGGAGCCCTTGGAA...ACCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR TCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAGCAGCAGCGTGGGCCTaGGGGCGCCCATCCTGCGCG +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLAAAWA*GRPSCA
Trigger: CGCGCAGGATGGGCGCCCTCAGGCCCACGCTGCTGC...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp TGGAGCTGGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGGACACCTGCAAGACCTaGAAAGGGTGCCCGGTGTGG +
Preference number: 4 (lower is better)
Translates to: WSWAGRQSTPARPEKGARDTCKT*KGCPVW
Trigger: CCACACCGGGCACCCTTTTCAGGTCTTGCAGGTGTC...CCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR GCA 90 bp GAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGTGTGGGCTGGGGAAGGCCCCACTGTCACTaGCAGCTGGCTGGACAGCGT +
Preference number: 4 (lower is better)
Translates to: EDSRHLQDLKRVPGVGWGRPHCH*QLAGQR
Trigger: ACGCTGTCCAGCCAGCTGGCAGTGACAGTGGGGCCT...TCCCCAGCCCACACCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR CCA 90 bp GGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGTGTGGGCCTCGAACATAGGCTTTaGCGAGGCAGCGGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: GPEDSRHLQDLKRVPGVGLEHRL*RGSGRC
Trigger: GCACCTACCGCTGCCTCGCCAAAGCCTATGTTCGAG...GCCCACACCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR TCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGCAGCAGCGTGGGCCTaGGGGCGCCCATCCTGCGCG +
Preference number: 4 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKAAAWA*GRPSCA
Trigger: CGCGCAGGATGGGCGCCCTCAGGCCCACGCTGCTGC...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp AGGGCTTGGAGCTGGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTAGCTCCTGCCCCTCATaGACCGTCATGCGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RAWSWAGRQSTPARPEKGSSCPS*TVMRGG
Trigger: ACCCCCACGCATGACGGTGCATGAGGGGCAGGAGCT...ACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCCAAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR GCA 90 bp TGGAGCTGGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGCCCGCACAGAGATGTTaGACAGCAGGGAGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: WSWAGRQSTPARPEKGARPAQRC*TAGRQS
Trigger: AGACTGCCTCCCTGCTGTGCAACATCTCTGTGCGGG...CCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR TCA 90 bp GGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGTGTGGGCCCACCACTCGGGACTTaGAGACAGCATAGGAGAACT +
Preference number: 4 (lower is better)
Translates to: GPEDSRHLQDLKRVPGVGPPLGT*RQHRRT
Trigger: AGTTCTCCTATGCTGTCTTCAAGTCCCGAGTGGTGG...GCCCACACCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR GCA 90 bp GGAGCTGGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGTTGTGGCACTCATAAATaGCGGCATCCTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GAGPEDSRHLQDLKRVPGCGTHK*RHPGPA
Trigger: TGCAGGCCCAGGATGCCGGCATTTATGAGTGCCACA...ACCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR CCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTACCCTCTGTGTCCAGCTaGGCTACCAGGCGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLPSVSS*ATRRPG
Trigger: GCCCGGCCGCCTGGTAGCCCAGCTGGACACAGAGGG...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp TTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGCAGCAGCGTGGGCCTaGGGGCGCCCATCCTGCGCG +
Preference number: 4 (lower is better)
Translates to: FQDRKWPPYRIPKRSRTEAAAWA*GRPSCA
Trigger: CGCGCAGGATGGGCGCCCTCAGGCCCACGCTGCTGC...TTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp AGGGCTTGGAGCTGGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTTGGGGGAAGTGCCCCTaGCACATTGCACAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: RAWSWAGRQSTPARPEKGWGKCP*HIAQQF
Trigger: GAACTGCTGTGCAATGTGTCAGGGGCACTTCCCCCA...ACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCCAAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR TCA 90 bp AGGGCTTGGAGCTGGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTACAGAGTATGCAGCATaGCGGCCTGCTGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RAWSWAGRQSTPARPEKGTEYAA*RPAGGS
Trigger: ACTTCCCCCAGCAGGCCGTCATGCTGCATACTCTGT...ACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCCAAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR CCA 90 bp AGGGCTTGGAGCTGGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGGTAGCGGGTATCAGTaGAGGGGGTGTGGCACTCAT +
Preference number: 4 (lower is better)
Translates to: RAWSWAGRQSTPARPEKGGSGYQ*RGCGTH
Trigger: ATGAGTGCCACACCCCCTCCACTGATACCCGCTACC...ACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCCAAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR CCA 90 bp GGAGCTGGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGTCACCTGGAGGACATCTaGAAGAACTCTCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GAGPEDSRHLQDLKRVPGHLEDI*KNSQLH
Trigger: GTGGAGCTGAGAGTTCTTCCAGATGTCCTCCAGGTG...ACCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR CCA 90 bp AGGGCTTGGAGCTGGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTACTGTCACTGCCAGCTaGCTGGACAGCGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: RAWSWAGRQSTPARPEKGTVTAS*LDSVCT
Trigger: TGTGCAGACGCTGTCCAGCCAGCTGGCAGTGACAGT...ACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCCAAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR CCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAGCTGCACCCAGGCGCTaGGGGCACAGTGGTACACGC +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLAAPRR*GHSGTR
Trigger: GCGTGTACCACTGTGCCCCCAGCGCCTGGGTGCAGC...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAGGGCAGGGACAGAGCTaGGCTCTCCGTCCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLGQGQS*ALRPLV
Trigger: GACCAGAGGACGGAGAGCTCAGCTCTGTCCCTGCCC...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTACCGGCATCCTGGGCCTaGAGGCGGGCAATCTTGAGC +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLPASWA*RRAILS
Trigger: GCTCAAGATTGCCCGCCTGCAGGCCCAGGATGCCGG...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp CAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGCGCCCTGAGCGGGCACTaGCCGCCTGGTACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: QDRKWPPYRIPKRSRTEGALSGH*PPGTSC
Trigger: ACAGCTGGTACCAGGCGGGCAGTGCCCGCTCAGGGC...GCCTTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGCCAGCCGCAGTCCTaGGGGGCCACCCCGCACAGA +
Preference number: 4 (lower is better)
Translates to: FQDRKWPPYRIPKRSRTEGQPQS*GATPHR
Trigger: TCTGTGCGGGGTGGCCCCCCAGGACTGCGGCTGGCC...TTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGGGCCAGCCGCAGTCCTaGGGGGCCACCCCGCACAGA +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQGQPQS*GATPHR
Trigger: TCTGTGCGGGGTGGCCCCCCAGGACTGCGGCTGGCC...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp CAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGCGCTGCACCCAGGCGCTaGGGGCACAGTGGTACACGC +
Preference number: 4 (lower is better)
Translates to: QDRKWPPYRIPKRSRTEGAAPRR*GHSGTR
Trigger: GCGTGTACCACTGTGCCCCCAGCGCCTGGGTGCAGC...GCCTTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TGGAGCTGGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGGCACGTCTCCCATTCTaGGTAGTGGGAGGTCAAATA +
Preference number: 4 (lower is better)
Translates to: WSWAGRQSTPARPEKGARARLPF*VVGGQI
Trigger: TATTTGACCTCCCACTACCCAGAATGGGAGACGTGC...CCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR TCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAGCCCTCGGCAGTTCTaGAACCATTCTCGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLSPRQF*NHSRPG
Trigger: GCCGGGGCGAGAATGGTTTCAGAACTGCCGAGGGCT...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR GCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTATCACCTTGTAGGCGCTaGACCTGCACCTCACCCGCC +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLSPCRR*TCTSPA
Trigger: GGCGGGTGAGGTGCAGGTGCAGCGCCTACAAGGTGA...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGGAACGGGCACTGGCTaGTTCACGAAGCCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKGTGTG*FTKPGP
Trigger: GGGACCCGGCTTCGTGAAGCAGCCAGTGCCCGTTCC...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTACCGGACTCCCAGCTCTaGCACACCATCCTGGCCTAC +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLPDSQL*HTILAY
Trigger: GTAGGCCAGGATGGTGTGGCAGAGCTGGGAGTCCGG...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAAGGATGGCGCGGGTTCTaGGGGGCCGGAAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQEGWRGF*GAGRVG
Trigger: CCCCACCCTTCCGGCCCCCCAGAACCCGCGCCATCC...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314485.12
ENST00000368086.5
CDS-3UTR CCA 90 bp CAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGCCCTGCGTCCCCTGCCTaGGCACCCCCTACTACCATG +
Preference number: 4 (lower is better)
Translates to: QDRKWPPYRIPKRSRTEGPASPA*APPTTM
Trigger: CATGGTAGTAGGGGGTGCCCAGGCAGGGGACGCAGG...GCCTTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp AGGGCTTGGAGCTGGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTCTTTTCTCTGCAATCTaGGCCCAGCTGCCATCAGGA +
Preference number: 4 (lower is better)
Translates to: RAWSWAGRQSTPARPEKGLFSAI*AQLPSG
Trigger: TCCTGATGGCAGCTGGGCCCAGATTGCAGAGAAAAG...ACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCCAAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR CCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGCCGCATCACCAGGCCTaGCAGCCTCTAGCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKPHHQA*QPLAVA
Trigger: GGCTACGGCTAGAGGCTGCCAGGCCTGGTGATGCGG...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGGCTCCACCCACCAGCTaGCGGCCAGCCGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQAPPTS*RPAAVL
Trigger: CAGGACTGCGGCTGGCCGCCAGCTGGTGGGTGGAGC...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAGAGCTCTCCGTCCTCTaGTCGCTCCACCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLELSVL*SLHPPA
Trigger: AGCTGGTGGGTGGAGCGACCAGAGGACGGAGAGCTC...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp GAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGCCCGGTGTGGGCTGGGGATTCCAGGACAGGAAATaGCCTCCCTATAGGATCCCT +
Preference number: 4 (lower is better)
Translates to: EDSRHLQDLKRVPGVGWGFQDRK*PPYRIP
Trigger: AGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA...TCCCCAGCCCACACCGGGCACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR GCA 90 bp TTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGCAGCGAGGCGTGGGTaGGCCGAGCGAGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: FQDRKWPPYRIPKRSRTEAARRG*AERAEL
Trigger: CAGTTCAGCTCGCTCGGCGCACCCACGCCTCGCTGC...TTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314485.12
ENST00000368086.5
CDS-3UTR GCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTACTCTCAGCTCCACCTTaGCGCTGTAGCTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLLSAPP*RCSCPG
Trigger: ACCTGGGCAGCTACAGCGGCAAGGTGGAGCTGAGAG...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGAGCTCCTGCCCCTCATaGACCGTCATGCGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKSSCPS*TVMRGG
Trigger: ACCCCCACGCATGACGGTGCATGAGGGGCAGGAGCT...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGCGAGGCAGCGGTAGGTaGCCGCATCACCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQRGSGR*PHHQAW
Trigger: CCAGGCCTGGTGATGCGGGCACCTACCGCTGCCTCG...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp CAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGCCCGGACTCCCAGCTCTaGCACACCATCCTGGCCTAC +
Preference number: 4 (lower is better)
Translates to: QDRKWPPYRIPKRSRTEGPDSQL*HTILAY
Trigger: GTAGGCCAGGATGGTGTGGCAGAGCTGGGAGTCCGG...GCCTTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAGCTGAACTGGAGCTaGCGAATCCCCTCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKELNWS*RIPSLR
Trigger: GCGGAGGGAGGGGATTCGGCAGCTCCAGTTCAGCTC...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS-3UTR CCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAGCCCAGTGCAGTATCTaGGGCCTCGGGCCTATACAG +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLAQCSI*GLGPIQ
Trigger: CTGTATAGGCCCGAGGCCCCAGATACTGCACTGGGC...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACACCCTCTGTGTCCAGCTaGGCTACCAGGCGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTPSVSS*ATRRPG
Trigger: GCCCGGCCGCCTGGTAGCCCAGCTGGACACAGAGGG...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGCCGGGAACGGGCACTaGCTGCTTCACGAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: FQDRKWPPYRIPKRSRTEAGNGH*LLHEAG
Trigger: CCCGGCTTCGTGAAGCAGCCAGTGCCCGTTCCCGGC...TTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGTCTGCCACACCATCCTaGCCTACGCCACCCACCAGC +
Preference number: 4 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKSATPS*PTPPTS
Trigger: GCTGGTGGGTGGCGTAGGCCAGGATGGTGTGGCAGA...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGCTGCACCCAGGCGCTaGGGGCACAGTGGTACACGC +
Preference number: 4 (lower is better)
Translates to: FQDRKWPPYRIPKRSRTEAAPRR*GHSGTR
Trigger: GCGTGTACCACTGTGCCCCCAGCGCCTGGGTGCAGC...TTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAGGAGGGCTTGGAGCTaGGCCGGAAGACAGTCGACA +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLRRAWS*AGRQST
Trigger: TGTCGACTGTCTTCCGGCCCAGCTCCAAGCCCTCCT...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp CAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGCGCAGGCGGGCAATCTTaGGCACCACGGCATCACCTT +
Preference number: 4 (lower is better)
Translates to: QDRKWPPYRIPKRSRTEGAGGQS*APRHHL
Trigger: AAGGTGATGCCGTGGTGCTCAAGATTGCCCGCCTGC...GCCTTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp CAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGCCACTTCCTGCAGAGTTaGCCGCCCAACTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: QDRKWPPYRIPKRSRTEGHFLQS*PPNWCL
Trigger: GAGGCACCAGTTGGGCGGTCAACTCTGCAGGAAGTG...GCCTTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGCTCCACGGCCAAGTCTaGCCGGATTCCCACCACTTC +
Preference number: 4 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKLHGQV*PDSHHF
Trigger: GAAGTGGTGGGAATCCGGTCAGACTTGGCCGTGGAG...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp TTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGGCAGGGACAGAGCTaGGCTCTCCGTCCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: FQDRKWPPYRIPKRSRTEGQGQS*ALRPLV
Trigger: GACCAGAGGACGGAGAGCTCAGCTCTGTCCCTGCCC...TTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACAGACTGTAACAGGCCCTaGGCGGGCACTGCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTDCNRP*AGTARL
Trigger: CAGGCGGGCAGTGCCCGCTCAGGGCCTGTTACAGTC...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACAGCAGCGAGGCGTGGGTaGGCCGAGCGAGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTAARRG*AERAEL
Trigger: CAGTTCAGCTCGCTCGGCGCACCCACGCCTCGCTGC...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314485.12
ENST00000368086.5
CDS-3UTR GCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAACTGACAATGCCCAGTaGAGTATCTGGGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLTDNAQ*SIWGLG
Trigger: CCCGAGGCCCCAGATACTGCACTGGGCATTGTCAGT...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGTCCACTCAGCGGCAGTaGAGTGGTAGGTGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKSTQRQ*SGRCLR
Trigger: ACGCAGGCACCTACCACTGCACTGCCGCTGAGTGGA...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAAGCCCTGAGCGGGCACTaGCCGCCTGGTACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQEALSGH*PPGTSC
Trigger: ACAGCTGGTACCAGGCGGGCAGTGCCCGCTCAGGGC...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAACCTGCGTCCCCTGCCTaGGCACCCCCTACTACCATG +
Preference number: 4 (lower is better)
Translates to: FQDRKWPPYRIPKRSRTEPASPA*APPTTM
Trigger: CATGGTAGTAGGGGGTGCCCAGGCAGGGGACGCAGG...TTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTACTCGAACATAGGCTTTaGCGAGGCAGCGGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLLEHRL*RGSGRC
Trigger: GCACCTACCGCTGCCTCGCCAAAGCCTATGTTCGAG...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCGGCCAGCCGCAGTCCTaGGGGGCCACCCCGCACAGA +
Preference number: 4 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSGQPQS*GATPHR
Trigger: TCTGTGCGGGGTGGCCCCCCAGGACTGCGGCTGGCC...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGACAGAGTATGCAGCATaGCGGCCTGCTGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKTEYAA*RPAGGS
Trigger: ACTTCCCCCAGCAGGCCGTCATGCTGCATACTCTGT...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp TTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGACAGTGGCACCAGTaGCTAGGGCCACCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: FQDRKWPPYRIPKRSRTEGQWHQ*LGPPLY
Trigger: GTACAGGGGTGGCCCTAGTCACTGGTGCCACTGTCC...TTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp CAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGCAGATGGAGACAGCTGTaGCAGCCACGCGGTACAAGG +
Preference number: 4 (lower is better)
Translates to: QDRKWPPYRIPKRSRTEGRWRQL*QPRGTR
Trigger: CCTTGTACCGCGTGGCTGGCACAGCTGTCTCCATCT...GCCTTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGAGATGGAGACAGCTGTaGCAGCCACGCGGTACAAGG +
Preference number: 4 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKRWRQL*QPRGTR
Trigger: CCTTGTACCGCGTGGCTGGCACAGCTGTCTCCATCT...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp CAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGCACTGACAATGCCCAGTaGAGTATCTGGGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: QDRKWPPYRIPKRSRTEGTDNAQ*SIWGLG
Trigger: CCCGAGGCCCCAGATACTGCACTGGGCATTGTCAGT...GCCTTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGTGTAGGCGCTGCACCTaGACCTCACCCGCCACCACT +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQCRRCT*TSPATT
Trigger: AGTGGTGGCGGGTGAGGTGCAGGTGCAGCGCCTACA...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGTCACCTTGTAGGCGCTaGACCTGCACCTCACCCGCC +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQSPCRR*TCTSPA
Trigger: GGCGGGTGAGGTGCAGGTGCAGCGCCTACAAGGTGA...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACCGGCATCCTGGGCCTaGAGGCGGGCAATCTTGAGC +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQEPASWA*RRAILS
Trigger: GCTCAAGATTGCCCGCCTGCAGGCCCAGGATGCCGG...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGCCTCATGCACCGTCATaGGTGGGGGTGAGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQPHAPS*VGVRLG
Trigger: CCCCAACCTCACCCCCACGCATGACGGTGCATGAGG...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp CAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGCGTGTGTGCTTCTGTGTaGTTGTCCTCGCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: QDRKWPPYRIPKRSRTEGVCASV*LSSPGS
Trigger: GCTGCCTGGCGAGGACAAGCACACAGAAGCACACAC...GCCTTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGCACCCCCTACTACCATaGGGTACCGATCGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKHPLLP*GTDRSL
Trigger: AAGGGACCGATCGGTACCGCATGGTAGTAGGGGGTG...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTACAATCTGGGCCCAGCTaGCATCAGGATCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLQSGPS*HQDPES
Trigger: GGATTCAGGATCCTGATGGCAGCTGGGCCCAGATTG...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAAAGCCAGGGCCCAGGCTaGCCACACCCTCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQESQGPG*PHPLCP
Trigger: TGGACACAGAGGGTGTGGGCAGCCTGGGCCCTGGCT...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAAGGAACGGGCACTGGCTaGTTCACGAAGCCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQEGTGTG*FTKPGP
Trigger: GGGACCCGGCTTCGTGAAGCAGCCAGTGCCCGTTCC...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACACCTGCGTCCCCTGCCTaGGCACCCCCTACTACCATG +
Preference number: 4 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTPASPA*APPTTM
Trigger: CATGGTAGTAGGGGGTGCCCAGGCAGGGGACGCAGG...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp CAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGCACTGTCACTGCCAGCTaGCTGGACAGCGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: QDRKWPPYRIPKRSRTEGTVTAS*LDSVCT
Trigger: TGTGCAGACGCTGTCCAGCCAGCTGGCAGTGACAGT...GCCTTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGTTCCAAGGGCTCCCCTaGGCCGATCCGACGTTCACC +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQFQGLP*ADPTFT
Trigger: GGTGAACGTCGGATCGGCCCAGGGGAGCCCTTGGAA...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGACCCTCTGTGTCCAGCTaGGCTACCAGGCGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRPSVSS*ATRRPG
Trigger: GCCCGGCCGCCTGGTAGCCCAGCTGGACACAGAGGG...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACACCGCATCACCAGGCCTaGCAGCCTCTAGCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTPHHQA*QPLAVA
Trigger: GGCTACGGCTAGAGGCTGCCAGGCCTGGTGATGCGG...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGCTCGAACATAGGCTTTaGCGAGGCAGCGGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKLEHRL*RGSGRC
Trigger: GCACCTACCGCTGCCTCGCCAAAGCCTATGTTCGAG...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGCTCCACCCACCAGCTaGCGGCCAGCCGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRAPPTS*RPAAVL
Trigger: CAGGACTGCGGCTGGCCGCCAGCTGGTGGGTGGAGC...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGTGTAGTCTCAGCCGATaGCTTCGGGGCCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQCSLSR*LRGPTS
Trigger: GCTGGTGGGGCCCCGAAGCCATCGGCTGAGACTACA...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGCGCTGGGGGCACAGTaGTACACGCCTTCATCCTCG +
Preference number: 4 (lower is better)
Translates to: FQDRKWPPYRIPKRSRTEALGAQ*YTPSSS
Trigger: CGAGGATGAAGGCGTGTACCACTGTGCCCCCAGCGC...TTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGCACTTCCTGCAGAGTTaGCCGCCCAACTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQHFLQS*PPNWCL
Trigger: GAGGCACCAGTTGGGCGGTCAACTCTGCAGGAAGTG...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp TTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAACTCCACGGCCAAGTCTaGCCGGATTCCCACCACTTC +
Preference number: 4 (lower is better)
Translates to: FQDRKWPPYRIPKRSRTELHGQV*PDSHHF
Trigger: GAAGTGGTGGGAATCCGGTCAGACTTGGCCGTGGAG...TTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCCACCAGCTCTACGCTaGCAGGGCCTCCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSPPALR*QGLLQA
Trigger: GGCCTGGAGGAGGCCCTGTCAGCGTAGAGCTGGTGG...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGACCACCAGCTCTACGCTaGCAGGGCCTCCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRPPALR*QGLLQA
Trigger: GGCCTGGAGGAGGCCCTGTCAGCGTAGAGCTGGTGG...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCGACTGTAACAGGCCCTaGGCGGGCACTGCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSDCNRP*AGTARL
Trigger: CAGGCGGGCAGTGCCCGCTCAGGGCCTGTTACAGTC...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACAGGACAGTGGCACCAGTaGCTAGGGCCACCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTGQWHQ*LGPPLY
Trigger: GTACAGGGGTGGCCCTAGTCACTGGTGCCACTGTCC...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAAGGACAGTGGCACCAGTaGCTAGGGCCACCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQEGQWHQ*LGPPLY
Trigger: GTACAGGGGTGGCCCTAGTCACTGGTGCCACTGTCC...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGTGTGGCACTCATAAATaGCGGCATCCTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKCGTHK*RHPGPA
Trigger: TGCAGGCCCAGGATGCCGGCATTTATGAGTGCCACA...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp CAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGCTGTGGCACTCATAAATaGCGGCATCCTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: QDRKWPPYRIPKRSRTEGCGTHK*RHPGPA
Trigger: TGCAGGCCCAGGATGCCGGCATTTATGAGTGCCACA...GCCTTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGCCTTGCCGCTGTAGCTaGCCAGGTAGCGGGTATCAG +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQPCRCS*PGSGYQ
Trigger: CTGATACCCGCTACCTGGGCAGCTACAGCGGCAAGG...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGCTCTCAGCTCCACCTTaGCGCTGTAGCTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQLSAPP*RCSCPG
Trigger: ACCTGGGCAGCTACAGCGGCAAGGTGGAGCTGAGAG...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACCTCATGCACCGTCATaGGTGGGGGTGAGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQEPHAPS*VGVRLG
Trigger: CCCCAACCTCACCCCCACGCATGACGGTGCATGAGG...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACACCCAGTGCCAGCTCCTaGCCCTCATGCACCGTCATG +
Preference number: 4 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTPSASS*PSCTVM
Trigger: CATGACGGTGCATGAGGGGCAGGAGCTGGCACTGGG...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGCAGACGAAGCTCCCCTaGAGCCAATCGCTCAGCATA +
Preference number: 4 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKQTKLP*SQSLSI
Trigger: TATGCTGAGCGATTGGCTGCAGGGGAGCTTCGTCTG...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGGATCGGTCCCTTCCTTaGCCAGACGAAGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQDRSLP*PDEAPL
Trigger: CAGGGGAGCTTCGTCTGGGCAAGGAAGGGACCGATC...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGTCCACTCAGCGGCAGTaGAGTGGTAGGTGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQSTQRQ*SGRCLR
Trigger: ACGCAGGCACCTACCACTGCACTGCCGCTGAGTGGA...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGGACGGCCCTTTTCTCTaGAATCTGGGCCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQDGPFL*NLGPAA
Trigger: GGCAGCTGGGCCCAGATTGCAGAGAAAAGGGCCGTC...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACATGGCTGGACAGCGTCTaGACATCCACGTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTWLDSV*TSTWAR
Trigger: CCTGGCCCACGTGGATGTGCAGACGCTGTCCAGCCA...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAAGGTGCCCCCGCAGGTaGCATCTCCCAACCTACAGA +
Preference number: 4 (lower is better)
Translates to: FQDRKWPPYRIPKRSRTERCPRR*HLPTYR
Trigger: TCTGTAGGTTGGGAGATGGCACCTGCGGGGGCACCT...TTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAGGTGCCCCCGCAGGTaGCATCTCCCAACCTACAGA +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQRCPRR*HLPTYR
Trigger: TCTGTAGGTTGGGAGATGGCACCTGCGGGGGCACCT...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGACGAGGCAGCGGTAGGTaGCCGCATCACCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRRGSGR*PHHQAW
Trigger: CCAGGCCTGGTGATGCGGGCACCTACCGCTGCCTCG...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCGAGGCAGCGGTAGGTaGCCGCATCACCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSRGSGR*PHHQAW
Trigger: CCAGGCCTGGTGATGCGGGCACCTACCGCTGCCTCG...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACACCCCGCGGTACACTGTaGCTCCTGCTAGCCATGCCA +
Preference number: 4 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTPRGTL*LLLAMP
Trigger: TGGCATGGCTAGCAGGAGGCACAGTGTACCGCGGGG...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACACCGGACTCCCAGCTCTaGCACACCATCCTGGCCTAC +
Preference number: 4 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTPDSQL*HTILAY
Trigger: GTAGGCCAGGATGGTGTGGCAGAGCTGGGAGTCCGG...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGGCCCAGTGCAGTATCTaGGGCCTCGGGCCTATACAG +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQAQCSI*GLGPIQ
Trigger: CTGTATAGGCCCGAGGCCCCAGATACTGCACTGGGC...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTACACCTGGAGGACATCTaGAAGAACTCTCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLHLEDI*KNSQLH
Trigger: GTGGAGCTGAGAGTTCTTCCAGATGTCCTCCAGGTG...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp CAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGCGGGGCAGCAGACACCTaGAGGACATCTGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: QDRKWPPYRIPKRSRTEGGAADT*RTSGRT
Trigger: AGTTCTTCCAGATGTCCTCCAGGTGTCTGCTGCCCC...GCCTTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGTCTGCACATCCACGTaGGCCAGGACGGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: FQDRKWPPYRIPKRSRTEVCTST*ARTALF
Trigger: GAAAAGGGCCGTCCTGGCCCACGTGGATGTGCAGAC...TTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACATTCCAAGGGCTCCCCTaGGCCGATCCGACGTTCACC +
Preference number: 4 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTFQGLP*ADPTFT
Trigger: GGTGAACGTCGGATCGGCCCAGGGGAGCCCTTGGAA...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAATGCCACCTTCTCCATaGCAATGTGTCGGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLMPPSP*QCVGPH
Trigger: ATGAGGGCCGACACATTGCCATGGAGAAGGTGGCAT...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAGTAGCCGGTATGTTCTaGATGCCACCTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLVAGMF*MPPSPW
Trigger: CCATGGAGAAGGTGGCATCCAGAACATACCGGCTAC...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCGCCGGGAACGGGCACTaGCTGCTTCACGAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSAGNGH*LLHEAG
Trigger: CCCGGCTTCGTGAAGCAGCCAGTGCCCGTTCCCGGC...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAATGTAGTCTCAGCCGATaGCTTCGGGGCCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQECSLSR*LRGPTS
Trigger: GCTGGTGGGGCCCCGAAGCCATCGGCTGAGACTACA...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAAGCGCTGGGGGCACAGTaGTACACGCCTTCATCCTCG +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQEALGAQ*YTPSSS
Trigger: CGAGGATGAAGGCGTGTACCACTGTGCCCCCAGCGC...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp CAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGCGACACCTGCAAGACCTaGGGAGTAAGGGATCACCGT +
Preference number: 4 (lower is better)
Translates to: QDRKWPPYRIPKRSRTEGDTCKT*GVRDHR
Trigger: ACGGTGATCCCTTACTCCCCAGGTCTTGCAGGTGTC...GCCTTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314485.12
ENST00000614243.4
CDS-3UTR CCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAGGAGGGCTTGGAGCTaGGCCGGAAGACAGTCGACA +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQRRAWS*AGRQST
Trigger: TGTCGACTGTCTTCCGGCCCAGCTCCAAGCCCTCCT...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGCCACCACTCGGGACTTaGAGACAGCATAGGAGAACT +
Preference number: 4 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKPPLGT*RQHRRT
Trigger: AGTTCTCCTATGCTGTCTTCAAGTCCCGAGTGGTGG...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAAGCAGGCGGGCAATCTTaGGCACCACGGCATCACCTT +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQEAGGQS*APRHHL
Trigger: AAGGTGATGCCGTGGTGCTCAAGATTGCCCGCCTGC...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACTCCACGGCCAAGTCTaGCCGGATTCCCACCACTTC +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQELHGQV*PDSHHF
Trigger: GAAGTGGTGGGAATCCGGTCAGACTTGGCCGTGGAG...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp TTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAATGGGGGAAGTGCCCCTaGCACATTGCACAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: FQDRKWPPYRIPKRSRTEWGKCP*HIAQQF
Trigger: GAACTGCTGTGCAATGTGTCAGGGGCACTTCCCCCA...TTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp CAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGCCATAGCCGGTCACATTaGAGGAGATGGAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: QDRKWPPYRIPKRSRTEGHSRSH*RRWRQL
Trigger: CAGCTGTCTCCATCTCCTGCAATGTGACCGGCTATG...GCCTTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACACTCTCAGCTCCACCTTaGCGCTGTAGCTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTLSAPP*RCSCPG
Trigger: ACCTGGGCAGCTACAGCGGCAAGGTGGAGCTGAGAG...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGATTCCCACCACTTCCTaGAGAGTTGACCGCCCAACT +
Preference number: 4 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKIPTTS*RVDRPT
Trigger: AGTTGGGCGGTCAACTCTGCAGGAAGTGGTGGGAAT...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCAGCCAGGGCCCAGGCTaGCCACACCCTCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSSQGPG*PHPLCP
Trigger: TGGACACAGAGGGTGTGGGCAGCCTGGGCCCTGGCT...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTACCGGTATGTTCTGGATaGCACCTTCTCCATGGCAAT +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLPVCSG*HLLHGN
Trigger: ATTGCCATGGAGAAGGTGGCATCCAGAACATACCGG...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGCCCGCACAGAGATGTTaGACAGCAGGGAGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQPAQRC*TAGRQS
Trigger: AGACTGCCTCCCTGCTGTGCAACATCTCTGTGCGGG...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGAAGACAGTCGACACCTaGAAGACCTGGGGAGTAAGG +
Preference number: 4 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKKTVDT*KTWGVR
Trigger: CCTTACTCCCCAGGTCTTGCAGGTGTCGACTGTCTT...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314485.12
ENST00000614243.4
CDS-3UTR CCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGTCACATTGCAGGAGATaGAGACAGCTGTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKSHCRR*RQLCQP
Trigger: TGGCTGGCACAGCTGTCTCCATCTCCTGCAATGTGA...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACAGTCTGCACATCCACGTaGGCCAGGACGGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTVCTST*ARTALF
Trigger: GAAAAGGGCCGTCCTGGCCCACGTGGATGTGCAGAC...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGATGCCACCTTCTCCATaGCAATGTGTCGGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKMPPSP*QCVGPH
Trigger: ATGAGGGCCGACACATTGCCATGGAGAAGGTGGCAT...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAGCACGTCTCCCATTCTaGGTAGTGGGAGGTCAAATA +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLARLPF*VVGGQI
Trigger: TATTTGACCTCCCACTACCCAGAATGGGAGACGTGC...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTATTCCAGGACAGGAAATaGCCTCCCTATAGGATCCCT +
Preference number: 4 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLFQDRK*PPYRIP
Trigger: AGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp CAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGCGGGTATCCTTGGTACTaGCAATGCCCAGTGCAGTAT +
Preference number: 4 (lower is better)
Translates to: QDRKWPPYRIPKRSRTEGGYPWY*QCPVQY
Trigger: ATACTGCACTGGGCATTGTCAGTACCAAGGATACCC...GCCTTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAAACAGAGTATGCAGCATaGCGGCCTGCTGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQETEYAA*RPAGGS
Trigger: ACTTCCCCCAGCAGGCCGTCATGCTGCATACTCTGT...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACAAGATGGAGACAGCTGTaGCAGCCACGCGGTACAAGG +
Preference number: 4 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTRWRQL*QPRGTR
Trigger: CCTTGTACCGCGTGGCTGGCACAGCTGTCTCCATCT...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAAACTGACAATGCCCAGTaGAGTATCTGGGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQETDNAQ*SIWGLG
Trigger: CCCGAGGCCCCAGATACTGCACTGGGCATTGTCAGT...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGATCACCTTGTAGGCGCTaGACCTGCACCTCACCCGCC +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRSPCRR*TCTSPA
Trigger: GGCGGGTGAGGTGCAGGTGCAGCGCCTACAAGGTGA...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGACCTCATGCACCGTCATaGGTGGGGGTGAGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRPHAPS*VGVRLG
Trigger: CCCCAACCTCACCCCCACGCATGACGGTGCATGAGG...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAAGCTCCTGCCCCTCATaGACCGTCATGCGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRSSCPS*TVMRGG
Trigger: ACCCCCACGCATGACGGTGCATGAGGGGCAGGAGCT...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCCCAGTGCCAGCTCCTaGCCCTCATGCACCGTCATG +
Preference number: 4 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSPSASS*PSCTVM
Trigger: CATGACGGTGCATGAGGGGCAGGAGCTGGCACTGGG...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGACCCAGTGCCAGCTCCTaGCCCTCATGCACCGTCATG +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRPSASS*PSCTVM
Trigger: CATGACGGTGCATGAGGGGCAGGAGCTGGCACTGGG...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAAGTGTGTGCTTCTGTGTaGTTGTCCTCGCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQEVCASV*LSSPGS
Trigger: GCTGCCTGGCGAGGACAAGCACACAGAAGCACACAC...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGTCGCCCAAAGGACACTaGCAGGTGTGTGTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQSPKGH*QVCVLL
Trigger: CAGAAGCACACACACCTGGCAGTGTCCTTTGGGCGA...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACACCCCCTACTACCATaGGGTACCGATCGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQEHPLLP*GTDRSL
Trigger: AAGGGACCGATCGGTACCGCATGGTAGTAGGGGGTG...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCTGGCTGGACAGCGTCTaGACATCCACGTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSWLDSV*TSTWAR
Trigger: CCTGGCCCACGTGGATGTGCAGACGCTGTCCAGCCA...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGATGGCTGGACAGCGTCTaGACATCCACGTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRWLDSV*TSTWAR
Trigger: CCTGGCCCACGTGGATGTGCAGACGCTGTCCAGCCA...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAAGGCCCCACTGTCACTaGCAGCTGGCTGGACAGCGT +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRRPHCH*QLAGQR
Trigger: ACGCTGTCCAGCCAGCTGGCAGTGACAGTGGGGCCT...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAACCAACCTACAGAGTATaGAGCATGACGGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FQDRKWPPYRIPKRSRTEPTYRV*SMTACW
Trigger: CCAGCAGGCCGTCATGCTGCATACTCTGTAGGTTGG...TTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp CAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGCCCGGTATGTTCTGGATaGCACCTTCTCCATGGCAAT +
Preference number: 4 (lower is better)
Translates to: QDRKWPPYRIPKRSRTEGPVCSG*HLLHGN
Trigger: ATTGCCATGGAGAAGGTGGCATCCAGAACATACCGG...GCCTTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAAGGTAGCGGGTATCAGTaGAGGGGGTGTGGCACTCAT +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQEGSGYQ*RGCGTH
Trigger: ATGAGTGCCACACCCCCTCCACTGATACCCGCTACC...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAAACTGTCACTGCCAGCTaGCTGGACAGCGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQETVTAS*LDSVCT
Trigger: TGTGCAGACGCTGTCCAGCCAGCTGGCAGTGACAGT...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCGAGCTCTCCGTCCTCTaGTCGCTCCACCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSELSVL*SLHPPA
Trigger: AGCTGGTGGGTGGAGCGACCAGAGGACGGAGAGCTC...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGAGCTCTCCGTCCTCTaGTCGCTCCACCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRELSVL*SLHPPA
Trigger: AGCTGGTGGGTGGAGCGACCAGAGGACGGAGAGCTC...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGATCTGCCACACCATCCTaGCCTACGCCACCCACCAGC +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRSATPS*PTPPTS
Trigger: GCTGGTGGGTGGCGTAGGCCAGGATGGTGTGGCAGA...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGACACCTGCAAGACCTaGGGAGTAAGGGATCACCGT +
Preference number: 4 (lower is better)
Translates to: FQDRKWPPYRIPKRSRTEDTCKT*GVRDHR
Trigger: ACGGTGATCCCTTACTCCCCAGGTCTTGCAGGTGTC...TTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314485.12
ENST00000614243.4
CDS-3UTR CCA 90 bp GGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGCACGTCTCCCATTCTaGGTAGTGGGAGGTCAAATA +
Preference number: 4 (lower is better)
Translates to: GRGGTSPILGSGRSNKLKARLPF*VVGGQI
Trigger: TATTTGACCTCCCACTACCCAGAATGGGAGACGTGC...CTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCGCAGGCGGGCAATCTTaGGCACCACGGCATCACCTT +
Preference number: 4 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSAGGQS*APRHHL
Trigger: AAGGTGATGCCGTGGTGCTCAAGATTGCCCGCCTGC...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCACTTCCTGCAGAGTTaGCCGCCCAACTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSHFLQS*PPNWCL
Trigger: GAGGCACCAGTTGGGCGGTCAACTCTGCAGGAAGTG...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCCTTGCCGCTGTAGCTaGCCAGGTAGCGGGTATCAG +
Preference number: 4 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSPCRCS*PGSGYQ
Trigger: CTGATACCCGCTACCTGGGCAGCTACAGCGGCAAGG...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGACCTTGCCGCTGTAGCTaGCCAGGTAGCGGGTATCAG +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRPCRCS*PGSGYQ
Trigger: CTGATACCCGCTACCTGGGCAGCTACAGCGGCAAGG...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAATCGCCCAAAGGACACTaGCAGGTGTGTGTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQESPKGH*QVCVLL
Trigger: CAGAAGCACACACACCTGGCAGTGTCCTTTGGGCGA...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGATTCCCACCACTTCCTaGAGAGTTGACCGCCCAACT +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQIPTTS*RVDRPT
Trigger: AGTTGGGCGGTCAACTCTGCAGGAAGTGGTGGGAAT...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGACGAAGCTCCCCTaGAGCCAATCGCTCAGCATA +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQEQTKLP*SQSLSI
Trigger: TATGCTGAGCGATTGGCTGCAGGGGAGCTTCGTCTG...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCGGTCCCTTCCTTaGCCAGACGAAGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRDRSLP*PDEAPL
Trigger: CAGGGGAGCTTCGTCTGGGCAAGGAAGGGACCGATC...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGATCCACTCAGCGGCAGTaGAGTGGTAGGTGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRSTQRQ*SGRCLR
Trigger: ACGCAGGCACCTACCACTGCACTGCCGCTGAGTGGA...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACACAATCTGGGCCCAGCTaGCATCAGGATCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTQSGPS*HQDPES
Trigger: GGATTCAGGATCCTGATGGCAGCTGGGCCCAGATTG...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGACGGCCCTTTTCTCTaGAATCTGGGCCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRDGPFL*NLGPAA
Trigger: GGCAGCTGGGCCCAGATTGCAGAGAAAAGGGCCGTC...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCGACGGCCCTTTTCTCTaGAATCTGGGCCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSDGPFL*NLGPAA
Trigger: GGCAGCTGGGCCCAGATTGCAGAGAAAAGGGCCGTC...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACACCAACCTACAGAGTATaGAGCATGACGGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTPTYRV*SMTACW
Trigger: CCAGCAGGCCGTCATGCTGCATACTCTGTAGGTTGG...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGACAGTCGACACCTaGAAGACCTGGGGAGTAAGG +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQKTVDT*KTWGVR
Trigger: CCTTACTCCCCAGGTCTTGCAGGTGTCGACTGTCTT...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314485.12
ENST00000614243.4
CDS-3UTR CCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCGCCCAGTGCAGTATCTaGGGCCTCGGGCCTATACAG +
Preference number: 4 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSAQCSI*GLGPIQ
Trigger: CTGTATAGGCCCGAGGCCCCAGATACTGCACTGGGC...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACAGGGGCAGCAGACACCTaGAGGACATCTGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTGAADT*RTSGRT
Trigger: AGTTCTTCCAGATGTCCTCCAGGTGTCTGCTGCCCC...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGCTTTTCTCTGCAATCTaGGCCCAGCTGCCATCAGGA +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQLFSAI*AQLPSG
Trigger: TCCTGATGGCAGCTGGGCCCAGATTGCAGAGAAAAG...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGTCTGCACATCCACGTaGGCCAGGACGGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRVCTST*ARTALF
Trigger: GAAAAGGGCCGTCCTGGCCCACGTGGATGTGCAGAC...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGTAGCCGGTATGTTCTaGATGCCACCTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: FQDRKWPPYRIPKRSRTEVAGMF*MPPSPW
Trigger: CCATGGAGAAGGTGGCATCCAGAACATACCGGCTAC...TTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGATGGGGGAAGTGCCCCTaGCACATTGCACAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRWGKCP*HIAQQF
Trigger: GAACTGCTGTGCAATGTGTCAGGGGCACTTCCCCCA...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACATAGCCGGTCACATTaGAGGAGATGGAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQEHSRSH*RRWRQL
Trigger: CAGCTGTCTCCATCTCCTGCAATGTGACCGGCTATG...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGTGTGTGCTTCTGTGTaGTTGTCCTCGCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRVCASV*LSSPGS
Trigger: GCTGCCTGGCGAGGACAAGCACACAGAAGCACACAC...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACAACTGCCAGGTGTGTGTaGTTCTGTGTGCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTTARCV*FCVLVL
Trigger: GAGGACAAGCACACAGAAGCACACACACCTGGCAGT...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGACACCCCCTACTACCATaGGGTACCGATCGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRHPLLP*GTDRSL
Trigger: AAGGGACCGATCGGTACCGCATGGTAGTAGGGGGTG...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGACCCGCACAGAGATGTTaGACAGCAGGGAGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRPAQRC*TAGRQS
Trigger: AGACTGCCTCCCTGCTGTGCAACATCTCTGTGCGGG...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAATCACATTGCAGGAGATaGAGACAGCTGTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQESHCRR*RQLCQP
Trigger: TGGCTGGCACAGCTGTCTCCATCTCCTGCAATGTGA...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGGTAGCGGGTATCAGTaGAGGGGGTGTGGCACTCAT +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRGSGYQ*RGCGTH
Trigger: ATGAGTGCCACACCCCCTCCACTGATACCCGCTACC...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACACCTGGAGGACATCTaGAAGAACTCTCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQEHLEDI*KNSQLH
Trigger: GTGGAGCTGAGAGTTCTTCCAGATGTCCTCCAGGTG...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGTTCCAGGACAGGAAATaGCCTCCCTATAGGATCCCT +
Preference number: 4 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQFQDRK*PPYRIP
Trigger: AGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCAATCTGGGCCCAGCTaGCATCAGGATCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSQSGPS*HQDPES
Trigger: GGATTCAGGATCCTGATGGCAGCTGGGCCCAGATTG...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACCGGTATGTTCTGGATaGCACCTTCTCCATGGCAAT +
Preference number: 4 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQEPVCSG*HLLHGN
Trigger: ATTGCCATGGAGAAGGTGGCATCCAGAACATACCGG...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGGGGCAGCAGACACCTaGAGGACATCTGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRGAADT*RTSGRT
Trigger: AGTTCTTCCAGATGTCCTCCAGGTGTCTGCTGCCCC...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCCACCACTCGGGACTTaGAGACAGCATAGGAGAACT +
Preference number: 4 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSPPLGT*RQHRRT
Trigger: AGTTCTCCTATGCTGTCTTCAAGTCCCGAGTGGTGG...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGACATAGCCGGTCACATTaGAGGAGATGGAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRHSRSH*RRWRQL
Trigger: CAGCTGTCTCCATCTCCTGCAATGTGACCGGCTATG...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAACTGCCAGGTGTGTGTaGTTCTGTGTGCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRTARCV*FCVLVL
Trigger: GAGGACAAGCACACAGAAGCACACACACCTGGCAGT...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCACTGCCAGGTGTGTGTaGTTCTGTGTGCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSTARCV*FCVLVL
Trigger: GAGGACAAGCACACAGAAGCACACACACCTGGCAGT...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR GCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAATTCCCACCACTTCCTaGAGAGTTGACCGCCCAACT +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRIPTTS*RVDRPT
Trigger: AGTTGGGCGGTCAACTCTGCAGGAAGTGGTGGGAAT...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCTCACATTGCAGGAGATaGAGACAGCTGTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSSHCRR*RQLCQP
Trigger: TGGCTGGCACAGCTGTCTCCATCTCCTGCAATGTGA...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCATGCCACCTTCTCCATaGCAATGTGTCGGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSMPPSP*QCVGPH
Trigger: ATGAGGGCCGACACATTGCCATGGAGAAGGTGGCAT...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CCA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCGTAGCCGGTATGTTCTaGATGCCACCTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSVAGMF*MPPSPW
Trigger: CCATGGAGAAGGTGGCATCCAGAACATACCGGCTAC...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR TCA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGGGTATCCTTGGTACTaGCAATGCCCAGTGCAGTAT +
Preference number: 4 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRGYPWY*QCPVQY
Trigger: ATACTGCACTGGGCATTGTCAGTACCAAGGATACCC...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS TCA 90 bp TTAGCAGCAGCAGCAGCGGCAGCGAAGGCGGCAGCAGCGTGGGCCTaGGGGCGCCCATCCTGCGCGGCCAGCTCTGGGGAGGCTCCGGGG +
Preference number: 5 (lower is better)
Translates to: LAAAAAAAKAAAAWA*GRPSCAASSGEAPG
Trigger: CCCCGGAGCCTCCCCAGAGCTGGCCGCGCAGGATGGGCGCCCTCAGGCCCACGCTGCTGCCGCCTTCGCTGCCGCTGCTGCTGCTGCTAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000614243.4
CDS CCA 90 bp GGCAGCAGCGTGGGCCTGAGGGCGCCCATCCTGCGCGGCCAGCTCTaGGGAGGCTCCGGGGGATGGCGCGGGTTCTTTGAGTCGCATCGA +
Preference number: 5 (lower is better)
Translates to: GSSVGLRAPILRGQL*GGSGGWRGFFESHR
Trigger: TCGATGCGACTCAAAGAACCCGCGCCATCCCCCGGAGCCTCCCCAGAGCTGGCCGCGCAGGATGGGCGCCCTCAGGCCCACGCTGCTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448417.1
CDS GCA 90 bp CGCATGCCCAGGTTGAGGGCAGGAAGCGGGGCAGCGAGGCGTGGGTaGGCCGAGCGAGCTGAACTGGAGCTGCCGAATCCCCTCCCTCCG +
Preference number: 5 (lower is better)
Translates to: RMPRLRAGSGAARRG*AERAELELPNPLPP
Trigger: CGGAGGGAGGGGATTCGGCAGCTCCAGTTCAGCTCGCTCGGCGCACCCACGCCTCGCTGCCCCGCTTCCTGCCCTCAACCTGGGCATGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS CCA 90 bp GTCCTCTGGTCGCTCCACCCACCAGCTGGCGGCCAGCCGCAGTCCTaGGGGGCCACCCCGCACAGAGATGTTGCACAGCAGGGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: VLWSLHPPAGGQPQS*GATPHRDVAQQGGS
Trigger: ACTGCCTCCCTGCTGTGCAACATCTCTGTGCGGGGTGGCCCCCCAGGACTGCGGCTGGCCGCCAGCTGGTGGGTGGAGCGACCAGAGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS GCA 90 bp CAGGGCCCTCATAGCCGGTCACATTGCAGGAGATGGAGACAGCTGTaGCAGCCACGCGGTACAAGGGCCCCTCGGGGACCAGCACCTCCC +
Preference number: 5 (lower is better)
Translates to: QGPHSRSHCRRWRQL*QPRGTRAPRGPAPP
Trigger: GGGAGGTGCTGGTCCCCGAGGGGCCCTTGTACCGCGTGGCTGGCACAGCTGTCTCCATCTCCTGCAATGTGACCGGCTATGAGGGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS CCA 90 bp TGCCCGCCTGGTACCAGCTGTAGTCGGCATGCTGCACCCAGGCGCTaGGGGCACAGTGGTACACGCCTTCATCCTCGGGCCCCAAGCTGT +
Preference number: 5 (lower is better)
Translates to: CPPGTSCSRHAAPRR*GHSGTRLHPRAPSC
Trigger: ACAGCTTGGGGCCCGAGGATGAAGGCGTGTACCACTGTGCCCCCAGCGCCTGGGTGCAGCATGCCGACTACAGCTGGTACCAGGCGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS GCA 90 bp GGGTCCCAGACCCTCGAACATAGGCTTTGGCGAGGCAGCGGTAGGTaGCCGCATCACCAGGCCTGGCAGCCTCTAGCCGTAGCCGGTATG +
Preference number: 5 (lower is better)
Translates to: GSQTLEHRLWRGSGR*PHHQAWQPLAVAGM
Trigger: CATACCGGCTACGGCTAGAGGCTGCCAGGCCTGGTGATGCGGGCACCTACCGCTGCCTCGCCAAAGCCTATGTTCGAGGGTCTGGGACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS CCA 90 bp TGGCTGCTTCACGAAGCCGGGTCCCAGACCCTCGAACATAGGCTTTaGCGAGGCAGCGGTAGGTGCCCGCATCACCAGGCCTGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: WLLHEAGSQTLEHRL*RGSGRCPHHQAWQP
Trigger: AGGCTGCCAGGCCTGGTGATGCGGGCACCTACCGCTGCCTCGCCAAAGCCTATGTTCGAGGGTCTGGGACCCGGCTTCGTGAAGCAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS GCA 90 bp GCTCCAGCCTCCACGGCCAAGTCTGACCGGATTCCCACCACTTCCTaGAGAGTTGACCGCCCAACTGGTGCCTCGGGCACAGATCGCCCA +
Preference number: 5 (lower is better)
Translates to: APASTAKSDRIPTTS*RVDRPTGASGTDRP
Trigger: TGGGCGATCTGTGCCCGAGGCACCAGTTGGGCGGTCAACTCTGCAGGAAGTGGTGGGAATCCGGTCAGACTTGGCCGTGGAGGCTGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS-3UTR CAA 90 bp AGGGCTTGGAGCTGGGCCGGAAGACAGTCGACACCTGCAAGACCTGAAAAGGGTGGGCGCATGCCCAGGTaGAGGGCAGGAAGCGGGGCA +
Preference number: 5 (lower is better)
Translates to: RAWSWAGRQSTPARPEKGGRMPR*RAGSGA
Trigger: TGCCCCGCTTCCTGCCCTCAACCTGGGCATGCGCCC...ACCCTTTTCAGGTCTTGCAGGTGTCGACTGTCTTCCGGCCCAGCTCCAAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS GCA 90 bp CATGCGGTACCGATCGGTCCCTTCCTTGCCCAGACGAAGCTCCCCTaGAGCCAATCGCTCAGCATAGGGAGCTCCAGCCTCCACGGCCAA +
Preference number: 5 (lower is better)
Translates to: HAVPIGPFLAQTKLP*SQSLSIGSSSLHGQ
Trigger: TTGGCCGTGGAGGCTGGAGCTCCCTATGCTGAGCGATTGGCTGCAGGGGAGCTTCGTCTGGGCAAGGAAGGGACCGATCGGTACCGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS GCA 90 bp CCTGGGCACCCCCTACTACCATGCGGTACCGATCGGTCCCTTCCTTaGCCAGACGAAGCTCCCCTGCAGCCAATCGCTCAGCATAGGGAG +
Preference number: 5 (lower is better)
Translates to: PGHPLLPCGTDRSLP*PDEAPLQPIAQHRE
Trigger: CTCCCTATGCTGAGCGATTGGCTGCAGGGGAGCTTCGTCTGGGCAAGGAAGGGACCGATCGGTACCGCATGGTAGTAGGGGGTGCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS GCA 90 bp TTCCTCCCGCACATGTACAGGGAGAGGCCGGGAACGGGCACTGGCTaGTTCACGAAGCCGGGTCCCAGACCCTCGAACATAGGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: FLPHMYRERPGTGTG*FTKPGPRPSNIGFG
Trigger: GCCAAAGCCTATGTTCGAGGGTCTGGGACCCGGCTTCGTGAAGCAGCCAGTGCCCGTTCCCGGCCTCTCCCTGTACATGTGCGGGAGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS CCA 90 bp CACCTTCCTCCCGCACATGTACAGGGAGAGGCCGGGAACGGGCACTaGCTGCTTCACGAAGCCGGGTCCCAGACCCTCGAACATAGGCTT +
Preference number: 5 (lower is better)
Translates to: HLPPAHVQGEAGNGH*LLHEAGSQTLEHRL
Trigger: AAGCCTATGTTCGAGGGTCTGGGACCCGGCTTCGTGAAGCAGCCAGTGCCCGTTCCCGGCCTCTCCCTGTACATGTGCGGGAGGAAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS TCA 90 bp GGCACTCATAAATGCCGGCATCCTGGGCCTGCAGGCGGGCAATCTTaGGCACCACGGCATCACCTTGTAGGCGCTGCACCTGCACCTCAC +
Preference number: 5 (lower is better)
Translates to: GTHKCRHPGPAGGQS*APRHHLVGAAPAPH
Trigger: GTGAGGTGCAGGTGCAGCGCCTACAAGGTGATGCCGTGGTGCTCAAGATTGCCCGCCTGCAGGCCCAGGATGCCGGCATTTATGAGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS GCA 90 bp TGCAGGCGGGCAATCTTGAGCACCACGGCATCACCTTGTAGGCGCTaGACCTGCACCTCACCCGCCACCACTCGGGACTTGAAGACAGCA +
Preference number: 5 (lower is better)
Translates to: CRRAILSTTASPCRR*TCTSPATTRDLKTA
Trigger: TGCTGTCTTCAAGTCCCGAGTGGTGGCGGGTGAGGTGCAGGTGCAGCGCCTACAAGGTGATGCCGTGGTGCTCAAGATTGCCCGCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS CCA 90 bp TCAGCTCCACCTTGCCGCTGTAGCTGCCCAGGTAGCGGGTATCAGTaGAGGGGGTGTGGCACTCATAAATGCCGGCATCCTGGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: SAPPCRCSCPGSGYQ*RGCGTHKCRHPGPA
Trigger: TGCAGGCCCAGGATGCCGGCATTTATGAGTGCCACACCCCCTCCACTGATACCCGCTACCTGGGCAGCTACAGCGGCAAGGTGGAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS CCA 90 bp CAGCCTCTAGCCGTAGCCGGTATGTTCTGGATGCCACCTTCTCCATaGCAATGTGTCGGCCCTCATAGCCAGGGCCCAGGCTGCCCACAC +
Preference number: 5 (lower is better)
Translates to: QPLAVAGMFWMPPSP*QCVGPHSQGPGCPH
Trigger: GTGTGGGCAGCCTGGGCCCTGGCTATGAGGGCCGACACATTGCCATGGAGAAGGTGGCATCCAGAACATACCGGCTACGGCTAGAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS CCA 90 bp CATAGGCTTTGGCGAGGCAGCGGTAGGTGCCCGCATCACCAGGCCTaGCAGCCTCTAGCCGTAGCCGGTATGTTCTGGATGCCACCTTCT +
Preference number: 5 (lower is better)
Translates to: HRLWRGSGRCPHHQA*QPLAVAGMFWMPPS
Trigger: AGAAGGTGGCATCCAGAACATACCGGCTACGGCTAGAGGCTGCCAGGCCTGGTGATGCGGGCACCTACCGCTGCCTCGCCAAAGCCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CAA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTATGCGTGGGGGTGAGGTaGGGGCCTGGCGGCCTCGGG +
Preference number: 5 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLCVGVR*GPGGLG
Trigger: CCCGAGGCCGCCAGGCCCCAACCTCACCCCCACGCA...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS GCA 90 bp GGACAGCGTCTGCACATCCACGTGGGCCAGGACGGCCCTTTTCTCTaGAATCTGGGCCCAGCTGCCATCAGGATCCTGAATCCACTCAGC +
Preference number: 5 (lower is better)
Translates to: GQRLHIHVGQDGPFL*NLGPAAIRILNPLS
Trigger: GCTGAGTGGATTCAGGATCCTGATGGCAGCTGGGCCCAGATTGCAGAGAAAAGGGCCGTCCTGGCCCACGTGGATGTGCAGACGCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS CCA 90 bp CCGCATCACCAGGCCTGGCAGCCTCTAGCCGTAGCCGGTATGTTCTaGATGCCACCTTCTCCATGGCAATGTGTCGGCCCTCATAGCCAG +
Preference number: 5 (lower is better)
Translates to: PHHQAWQPLAVAGMF*MPPSPWQCVGPHSQ
Trigger: CTGGCTATGAGGGCCGACACATTGCCATGGAGAAGGTGGCATCCAGAACATACCGGCTACGGCTAGAGGCTGCCAGGCCTGGTGATGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS CCA 90 bp TCCCGGGCCCAGCATCCCATTCCTGTAGGGAAAGGCAGAAGGAGTTaGAGATGCCTGGTTCCTCATTCCATGCCCTCTGCCGCCACAAGC +
Preference number: 5 (lower is better)
Translates to: SRAQHPIPVGKGRRS*RCLVPHSMPSAATS
Trigger: GCTTGTGGCGGCAGAGGGCATGGAATGAGGAACCAGGCATCTCCAACTCCTTCTGCCTTTCCCTACAGGAATGGGATGCTGGGCCCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460351.1
CDS CCA 90 bp GGAGAACTGGGTATCCTTGGTACTGACAATGCCCAGTGCAGTATCTaGGGCCTCGGGCCTATACAGGAACCACTCGAAGTTCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GELGILGTDNAQCSI*GLGPIQEPLEVLLG
Trigger: GCCCAGCAGAACTTCGAGTGGTTCCTGTATAGGCCCGAGGCCCCAGATACTGCACTGGGCATTGTCAGTACCAAGGATACCCAGTTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS-3UTR CAA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGGGGCGCATGCCCAGGTaGAGGGCAGGAAGCGGGGCA +
Preference number: 5 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQGRMPR*RAGSGA
Trigger: TGCCCCGCTTCCTGCCCTCAACCTGGGCATGCGCCC...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314485.12
ENST00000368086.5
CDS-3UTR CAA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCTGCGTGGGGGTGAGGTaGGGGCCTGGCGGCCTCGGG +
Preference number: 5 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSCVGVR*GPGGLG
Trigger: CCCGAGGCCGCCAGGCCCCAACCTCACCCCCACGCA...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CAA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGATGCGTGGGGGTGAGGTaGGGGCCTGGCGGCCTCGGG +
Preference number: 5 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRCVGVR*GPGGLG
Trigger: CCCGAGGCCGCCAGGCCCCAACCTCACCCCCACGCA...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CAA 90 bp CAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGCCGATCGGTCCCTTCCTaGCCCAGACGAAGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: QDRKWPPYRIPKRSRTEGRSVPS*PRRSSP
Trigger: AGGGGAGCTTCGTCTGGGCAAGGAAGGGACCGATCG...GCCTTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CAA 90 bp CAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAAGGCTGCAGGCGGGCAATCTaGAGCACCACGGCATCACCT +
Preference number: 5 (lower is better)
Translates to: QDRKWPPYRIPKRSRTEGCRRAI*STTASP
Trigger: AGGTGATGCCGTGGTGCTCAAGATTGCCCGCCTGCA...GCCTTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS GCA 90 bp GACAGCATAGGAGAACTGGGTATCCTTGGTACTGACAATGCCCAGTaGAGTATCTGGGGCCTCGGGCCTATACAGGAACCACTCGAAGTT +
Preference number: 5 (lower is better)
Translates to: DSIGELGILGTDNAQ*SIWGLGPIQEPLEV
Trigger: AACTTCGAGTGGTTCCTGTATAGGCCCGAGGCCCCAGATACTGCACTGGGCATTGTCAGTACCAAGGATACCCAGTTCTCCTATGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS-3UTR CAA 90 bp TTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAACGATCGGTCCCTTCCTaGCCCAGACGAAGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: FQDRKWPPYRIPKRSRTERSVPS*PRRSSP
Trigger: AGGGGAGCTTCGTCTGGGCAAGGAAGGGACCGATCG...TTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CAA 90 bp TTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGAATGCAGGCGGGCAATCTaGAGCACCACGGCATCACCT +
Preference number: 5 (lower is better)
Translates to: FQDRKWPPYRIPKRSRTECRRAI*STTASP
Trigger: AGGTGATGCCGTGGTGCTCAAGATTGCCCGCCTGCA...TTCTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CAA 90 bp AATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAACAGCCACTTCCTGCAGAGTaGACCGCCCAACTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: NSRTGNGLPIGSLRDQEQPLPAE*TAQLVP
Trigger: AGGCACCAGTTGGGCGGTCAACTCTGCAGGAAGTGG...CTGTTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CAA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACACGATCGGTCCCTTCCTaGCCCAGACGAAGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTRSVPS*PRRSSP
Trigger: AGGGGAGCTTCGTCTGGGCAAGGAAGGGACCGATCG...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CAA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACACCCCGCACAGAGATGTaGCACAGCAGGGAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTPRTEM*HSREAV
Trigger: GACTGCCTCCCTGCTGTGCAACATCTCTGTGCGGGG...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CAA 90 bp TGGGGAAGGGGAGGCACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAGAGAACTGGGTATCCTaGGTACTGACAATGCCCAGT +
Preference number: 5 (lower is better)
Translates to: WGRGGTSPILGSGRSNKLENWVS*VLTMPS
Trigger: ACTGGGCATTGTCAGTACCAAGGATACCCAGTTCTC...TAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCCCTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CAA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAATGTGCTTCTGTGTGCTaGTCCTCGCCAGGCAGCCCA +
Preference number: 5 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQECASVC*SSPGSP
Trigger: TGGGCTGCCTGGCGAGGACAAGCACACAGAAGCACA...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CAA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACACCACTTCCTGCAGAGTaGACCGCCCAACTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTPLPAE*TAQLVP
Trigger: AGGCACCAGTTGGGCGGTCAACTCTGCAGGAAGTGG...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CAA 90 bp ACGTCTCCCATTCTGGGTAGTGGGAGGTCAAATAAATTAAAGGAAGAGTGGACAAGTGCCCCTGACACATaGCACAGCAGTTCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: TSPILGSGRSNKLKEEWTSAPDT*HSSSKG
Trigger: GCCCTTGGAACTGCTGTGCAATGTGTCAGGGGCACT...TGTCCACTCTTCCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CAA 90 bp ACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGATCAAGAAAGTGCCCCTGACACATaGCACAGCAGTTCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: TNSRTGNGLPIGSLRDQESAPDT*HSSSKG
Trigger: GCCCTTGGAACTGCTGTGCAATGTGTCAGGGGCACT...TTCTTGATCTCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CAA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGACCCCGCACAGAGATGTaGCACAGCAGGGAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRPRTEM*HSREAV
Trigger: GACTGCCTCCCTGCTGTGCAACATCTCTGTGCGGGG...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CAA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCCCCGCACAGAGATGTaGCACAGCAGGGAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSPRTEM*HSREAV
Trigger: GACTGCCTCCCTGCTGTGCAACATCTCTGTGCGGGG...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CAA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGATGCAGGCGGGCAATCTaGAGCACCACGGCATCACCT +
Preference number: 5 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRCRRAI*STTASP
Trigger: AGGTGATGCCGTGGTGCTCAAGATTGCCCGCCTGCA...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CAA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGATGTGCTTCTGTGTGCTaGTCCTCGCCAGGCAGCCCA +
Preference number: 5 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRCASVC*SSPGSP
Trigger: TGGGCTGCCTGGCGAGGACAAGCACACAGAAGCACA...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CAA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCCACTTCCTGCAGAGTaGACCGCCCAACTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSPLPAE*TAQLVP
Trigger: AGGCACCAGTTGGGCGGTCAACTCTGCAGGAAGTGG...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CAA 90 bp TTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCCTAAGAGAGAACTGGGTATCCTaGGTACTGACAATGCCCAGT +
Preference number: 5 (lower is better)
Translates to: FRKTNSRTGNGLPIGSLRENWVS*VLTMPS
Trigger: ACTGGGCATTGTCAGTACCAAGGATACCCAGTTCTC...TCTTAGGGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS-3UTR CAA 90 bp TCACATTTTAGAAAAACTAATTCCAGGACAGGAAATGGCCTCCCTATAGGATCCGAGAACTGGGTATCCTaGGTACTGACAATGCCCAGT +
Preference number: 5 (lower is better)
Translates to: SHFRKTNSRTGNGLPIGSENWVS*VLTMPS
Trigger: ACTGGGCATTGTCAGTACCAAGGATACCCAGTTCTC...GGATCCTATAGGGAGGCCATTTCCTGTCCTGGAATTAGTTTTTCTAAAATGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS CCA 72 bp TCGCTCCACCCACCAGCTGGCGGCCAGCCGCAGTCCTaGGGGGCCACCCCGCACAGAGATGTTGCACAGCAG +
Preference number: 6 (lower is better)
Translates to: SLHPPAGGQPQS*GATPHRDVAQQ
Trigger: CTGCTGTGCAACATCTCTGTGCGGGGTGGCCCCCCAGGACTGCGGCTGGCCGCCAGCTGGTGGGTGGAGCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS GCA 72 bp AGGTTGAGGGCAGGAAGCGGGGCAGCGAGGCGTGGGTaGGCCGAGCGAGCTGAACTGGAGCTGCCGAATCCC +
Preference number: 6 (lower is better)
Translates to: RLRAGSGAARRG*AERAELELPNP
Trigger: GGGATTCGGCAGCTCCAGTTCAGCTCGCTCGGCGCACCCACGCCTCGCTGCCCCGCTTCCTGCCCTCAACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368086.5
CDS CCA 72 bp CACGAAGCCGGGTCCCAGACCCTCGAACATAGGCTTTaGCGAGGCAGCGGTAGGTGCCCGCATCACCAGGCC +
Preference number: 6 (lower is better)
Translates to: HEAGSQTLEHRL*RGSGRCPHHQA
Trigger: GGCCTGGTGATGCGGGCACCTACCGCTGCCTCGCCAAAGCCTATGTTCGAGGGTCTGGGACCCGGCTTCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS CCA 72 bp CCCGCACATGTACAGGGAGAGGCCGGGAACGGGCACTaGCTGCTTCACGAAGCCGGGTCCCAGACCCTCGAA +
Preference number: 6 (lower is better)
Translates to: PAHVQGEAGNGH*LLHEAGSQTLE
Trigger: TTCGAGGGTCTGGGACCCGGCTTCGTGAAGCAGCCAGTGCCCGTTCCCGGCCTCTCCCTGTACATGTGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS CCA 72 bp GGTACCAGCTGTAGTCGGCATGCTGCACCCAGGCGCTaGGGGCACAGTGGTACACGCCTTCATCCTCGGGCC +
Preference number: 6 (lower is better)
Translates to: GTSCSRHAAPRR*GHSGTRLHPRA
Trigger: GGCCCGAGGATGAAGGCGTGTACCACTGTGCCCCCAGCGCCTGGGTGCAGCATGCCGACTACAGCTGGTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS GCA 72 bp CATAGCCGGTCACATTGCAGGAGATGGAGACAGCTGTaGCAGCCACGCGGTACAAGGGCCCCTCGGGGACCA +
Preference number: 6 (lower is better)
Translates to: HSRSHCRRWRQL*QPRGTRAPRGP
Trigger: TGGTCCCCGAGGGGCCCTTGTACCGCGTGGCTGGCACAGCTGTCTCCATCTCCTGCAATGTGACCGGCTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS GCA 72 bp CCGATCGGTCCCTTCCTTGCCCAGACGAAGCTCCCCTaGAGCCAATCGCTCAGCATAGGGAGCTCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: PIGPFLAQTKLP*SQSLSIGSSSL
Trigger: GAGGCTGGAGCTCCCTATGCTGAGCGATTGGCTGCAGGGGAGCTTCGTCTGGGCAAGGAAGGGACCGATCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS GCA 72 bp ACCCTCGAACATAGGCTTTGGCGAGGCAGCGGTAGGTaGCCGCATCACCAGGCCTGGCAGCCTCTAGCCGTA +
Preference number: 6 (lower is better)
Translates to: TLEHRLWRGSGR*PHHQAWQPLAV
Trigger: TACGGCTAGAGGCTGCCAGGCCTGGTGATGCGGGCACCTACCGCTGCCTCGCCAAAGCCTATGTTCGAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS CAA 90 bp CCTCCACGGCCAAGTCTGACCGGATTCCCACCACTTCCTGCAGAGTaGACCGCCCAACTGGTGCCTCGGGCACAGATCGCCCAAAGGACA +
Preference number: 6 (lower is better)
Translates to: PPRPSLTGFPPLPAE*TAQLVPRAQIAQRT
Trigger: TGTCCTTTGGGCGATCTGTGCCCGAGGCACCAGTTGGGCGGTCAACTCTGCAGGAAGTGGTGGGAATCCGGTCAGACTTGGCCGTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS GCA 72 bp AGTTCTGCTGGGCAGGGCCCTCATAGCCGGTCACATTaGAGGAGATGGAGACAGCTGTGCCAGCCACGCGGT +
Preference number: 6 (lower is better)
Translates to: SSAGQGPHSRSH*RRWRQLCQPRG
Trigger: ACCGCGTGGCTGGCACAGCTGTCTCCATCTCCTGCAATGTGACCGGCTATGAGGGCCCTGCCCAGCAGAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS GCA 72 bp GCAATCTTGAGCACCACGGCATCACCTTGTAGGCGCTaGACCTGCACCTCACCCGCCACCACTCGGGACTTG +
Preference number: 6 (lower is better)
Translates to: AILSTTASPCRR*TCTSPATTRDL
Trigger: CAAGTCCCGAGTGGTGGCGGGTGAGGTGCAGGTGCAGCGCCTACAAGGTGATGCCGTGGTGCTCAAGATTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS GCA 72 bp TCCACGGCCAAGTCTGACCGGATTCCCACCACTTCCTaGAGAGTTGACCGCCCAACTGGTGCCTCGGGCACA +
Preference number: 6 (lower is better)
Translates to: STAKSDRIPTTS*RVDRPTGASGT
Trigger: TGTGCCCGAGGCACCAGTTGGGCGGTCAACTCTGCAGGAAGTGGTGGGAATCCGGTCAGACTTGGCCGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS GCA 72 bp CCCCTACTACCATGCGGTACCGATCGGTCCCTTCCTTaGCCAGACGAAGCTCCCCTGCAGCCAATCGCTCAG +
Preference number: 6 (lower is better)
Translates to: PLLPCGTDRSLP*PDEAPLQPIAQ
Trigger: CTGAGCGATTGGCTGCAGGGGAGCTTCGTCTGGGCAAGGAAGGGACCGATCGGTACCGCATGGTAGTAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS CCA 72 bp GCCGTAGCCGGTATGTTCTGGATGCCACCTTCTCCATaGCAATGTGTCGGCCCTCATAGCCAGGGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: AVAGMFWMPPSP*QCVGPHSQGPG
Trigger: GCCTGGGCCCTGGCTATGAGGGCCGACACATTGCCATGGAGAAGGTGGCATCCAGAACATACCGGCTACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS GCA 72 bp TTGAGCACCACGGCATCACCTTGTAGGCGCTGCACCTaGACCTCACCCGCCACCACTCGGGACTTGAAGACA +
Preference number: 6 (lower is better)
Translates to: LSTTASPCRRCT*TSPATTRDLKT
Trigger: TGTCTTCAAGTCCCGAGTGGTGGCGGGTGAGGTGCAGGTGCAGCGCCTACAAGGTGATGCCGTGGTGCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS GCA 72 bp GGCACAGATCGCCCAAAGGACACTGCCAGGTGTGTGTaGTTCTGTGTGCTTGTCCTCGCCAGGCAGCCCAGT +
Preference number: 6 (lower is better)
Translates to: GTDRPKDTARCV*FCVLVLARQPS
Trigger: ACTGGGCTGCCTGGCGAGGACAAGCACACAGAAGCACACACACCTGGCAGTGTCCTTTGGGCGATCTGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS CCA 72 bp CCTTGCCGCTGTAGCTGCCCAGGTAGCGGGTATCAGTaGAGGGGGTGTGGCACTCATAAATGCCGGCATCCT +
Preference number: 6 (lower is better)
Translates to: PCRCSCPGSGYQ*RGCGTHKCRHP
Trigger: AGGATGCCGGCATTTATGAGTGCCACACCCCCTCCACTGATACCCGCTACCTGGGCAGCTACAGCGGCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS CCA 72 bp CAGGCCTGGCAGCCTCTAGCCGTAGCCGGTATGTTCTaGATGCCACCTTCTCCATGGCAATGTGTCGGCCCT +
Preference number: 6 (lower is better)
Translates to: QAWQPLAVAGMF*MPPSPWQCVGP
Trigger: AGGGCCGACACATTGCCATGGAGAAGGTGGCATCCAGAACATACCGGCTACGGCTAGAGGCTGCCAGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS CAA 90 bp CTCCCGGGCCCAGCATCCCATTCCTGTAGGGAAAGGCAGAAGGAGTaGGAGATGCCTGGTTCCTCATTCCATGCCCTCTGCCGCCACAAG +
Preference number: 6 (lower is better)
Translates to: LPGPASHSCRERQKE*EMPGSSFHALCRHK
Trigger: CTTGTGGCGGCAGAGGGCATGGAATGAGGAACCAGGCATCTCCAACTCCTTCTGCCTTTCCCTACAGGAATGGGATGCTGGGCCCGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460351.1
CDS TCA 72 bp GCAGGTGCCATCTCCCAACCTACAGAGTATGCAGCATaGCGGCCTGCTGGGGGAAGTGCCCCTGACACATTG +
Preference number: 6 (lower is better)
Translates to: AGAISQPTEYAA*RPAGGSAPDTL
Trigger: CAATGTGTCAGGGGCACTTCCCCCAGCAGGCCGTCATGCTGCATACTCTGTAGGTTGGGAGATGGCACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000614243.4
CDS GCA 72 bp CCTGGAGGACATCTGGAAGAACTCTCAGCTCCACCTTaGCGCTGTAGCTGCCCAGGTAGCGGGTATCAGTGG +
Preference number: 6 (lower is better)
Translates to: PGGHLEELSAPP*RCSCPGSGYQW
Trigger: CCACTGATACCCGCTACCTGGGCAGCTACAGCGGCAAGGTGGAGCTGAGAGTTCTTCCAGATGTCCTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS GCA 72 bp CTGCACATCCACGTGGGCCAGGACGGCCCTTTTCTCTaGAATCTGGGCCCAGCTGCCATCAGGATCCTGAAT +
Preference number: 6 (lower is better)
Translates to: LHIHVGQDGPFL*NLGPAAIRILN
Trigger: ATTCAGGATCCTGATGGCAGCTGGGCCCAGATTGCAGAGAAAAGGGCCGTCCTGGCCCACGTGGATGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000614243.4
CDS TCA 72 bp GCTGCACCTGCACCTCACCCGCCACCACTCGGGACTTaGAGACAGCATAGGAGAACTGGGTATCCTTGGTAC +
Preference number: 6 (lower is better)
Translates to: AAPAPHPPPLGT*RQHRRTGYPWY
Trigger: GTACCAAGGATACCCAGTTCTCCTATGCTGTCTTCAAGTCCCGAGTGGTGGCGGGTGAGGTGCAGGTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4
CDS GCA 72 bp GCAGAAGGAGTTGGAGATGCCTGGTTCCTCATTCCATaGCCTCTGCCGCCACAAGCACCATTCTTGATCTCT +
Preference number: 6 (lower is better)
Translates to: AEGVGDAWFLIP*PLPPQAPFLIS
Trigger: AGAGATCAAGAATGGTGCTTGTGGCGGCAGAGGGCATGGAATGAGGAACCAGGCATCTCCAACTCCTTCTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460351.1
CDS CCA 72 bp GGTATCCTTGGTACTGACAATGCCCAGTGCAGTATCTaGGGCCTCGGGCCTATACAGGAACCACTCGAAGTT +
Preference number: 6 (lower is better)
Translates to: GILGTDNAQCSI*GLGPIQEPLEV
Trigger: AACTTCGAGTGGTTCCTGTATAGGCCCGAGGCCCCAGATACTGCACTGGGCATTGTCAGTACCAAGGATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314485.12
ENST00000368086.5
ENST00000448417.1
ENST00000460351.1
ENST00000614243.4