RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGSF6 (Homo sapiens)

Ensembl gene IDs: ENSG00000140749

Ensembl transcript IDs: ENST00000268389.6, ENST00000565499.1, ENST00000569602.1, ENST00000638543.2, ENST00000639480.2

Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCATGATTTCCACAAACCATAAAGGTGATTCTTCCACTCAAGACTaGGGCACATGGTTTGGCTTCAGATCTTCAGGATGGCAGTCATCA +
Preference number: 1 (lower is better)
Translates to: AMISTNHKGDSSTQD*GTWFGFRSSGWQSS
Trigger: TGATGACTGCCATCCTGAAGATCTGAAGCCAAACCATGTGCCTCAGTCTTGAGTGGAAGAATCACCTTTATGGTTTGTGGAAATCATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR GCA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTCCTGGCAGGCAAATGTaGGTTACCCCACTGCCCCAT +
Preference number: 2 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRPGRQM*VTPLPH
Trigger: ATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGG...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR CCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCACTGAGGCAGAAGAATaGCATGAACCCGGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: LWEAISGRSSEVLSLRPATEAEE*HEPGRW
Trigger: CCACCTCCCGGGTTCATGCCATTCTTCTGCCTCAGT...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR TCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATCTTCCACTCAAGACTaGGGCACATGGTTTGGCTTC +
Preference number: 2 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPSSTQD*GTWFGF
Trigger: GAAGCCAAACCATGTGCCTCAGTCTTGAGTGGAAGA...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR TCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCTCTTCCACTCAAGACTaGGGCACATGGTTTGGCTTC +
Preference number: 2 (lower is better)
Translates to: LWEAISGRSSEVLSLRPASSTQD*GTWFGF
Trigger: GAAGCCAAACCATGTGCCTCAGTCTTGAGTGGAAGA...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR GCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCTGTGCGTTACCCCACTaGCCCATTACAACATCAGAG +
Preference number: 2 (lower is better)
Translates to: LWEAISGRSSEVLSLRPACALPH*PITTSE
Trigger: CTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACA...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR CCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACACACTGCCATAGCTCCTaGAGTTGGATTTTCAGTGAC +
Preference number: 2 (lower is better)
Translates to: TLHTLAGKCALPHCPITTHCHSS*SWIFSD
Trigger: GTCACTGAAAATCCAACTCCAGGAGCTATGGCAGTG...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR CCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCACACTGCCATAGCTCCTaGAGTTGGATTTTCAGTGAC +
Preference number: 2 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPHCHSS*SWIFSD
Trigger: GTCACTGAAAATCCAACTCCAGGAGCTATGGCAGTG...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR CCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACACTGAGGCACATGGTTTaGCTTCAGATCTTCAGGATG +
Preference number: 2 (lower is better)
Translates to: TLHTLAGKCALPHCPITTLRHMV*LQIFRM
Trigger: CATCCTGAAGATCTGAAGCCAAACCATGTGCCTCAG...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR CCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCACTGAGGCACATGGTTTaGCTTCAGATCTTCAGGATG +
Preference number: 2 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPLRHMV*LQIFRM
Trigger: CATCCTGAAGATCTGAAGCCAAACCATGTGCCTCAG...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR CCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCCTGAGGCACATGGTTTaGCTTCAGATCTTCAGGATG +
Preference number: 2 (lower is better)
Translates to: LWEAISGRSSEVLSLRPALRHMV*LQIFRM
Trigger: CATCCTGAAGATCTGAAGCCAAACCATGTGCCTCAG...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR CCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCTGCCCACATCTTCCCTaGTGCTGTTATTTGGCACAA +
Preference number: 2 (lower is better)
Translates to: LWEAISGRSSEVLSLRPACPHLP*CCYLAQ
Trigger: TTGTGCCAAATAACAGCACCAGGGAAGATGTGGGCA...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR CCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCTTACTTTGCATACCCTaGCAGGCAAATGTGCGTTAC +
Preference number: 2 (lower is better)
Translates to: LWEAISGRSSEVLSLRPALLCIP*QANVRY
Trigger: GTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAA...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR TCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGTCACACATCTCATGTTaGATGAAACAGACTCAGGAT +
Preference number: 2 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRSHISC*MKQTQD
Trigger: ATCCTGAGTCTGTTTCATTCAACATGAGATGTGTGA...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR TCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCTCACACATCTCATGTTaGATGAAACAGACTCAGGAT +
Preference number: 2 (lower is better)
Translates to: LWEAISGRSSEVLSLRPASHISC*MKQTQD
Trigger: ATCCTGAGTCTGTTTCATTCAACATGAGATGTGTGA...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR TCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCGTGGCTTATTTGTTCTaGAGTTACCTCTGTTTAACC +
Preference number: 2 (lower is better)
Translates to: LWEAISGRSSEVLSLRPAVAYLF*SYLCLT
Trigger: GGTTAAACAGAGGTAACTTCAGAACAAATAAGCCAC...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR TCA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTTCACACATCTCATGTTaGATGAAACAGACTCAGGAT +
Preference number: 2 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRSHISC*MKQTQD
Trigger: ATCCTGAGTCTGTTTCATTCAACATGAGATGTGTGA...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR CAA 90 bp CAAACCATAAAGGTGATTCTTCCACTCAAGACTGAGGCACATGGTTaGGCTTCAGATCTTCAGGATGGCAGTCATCACACATCTCATGTT +
Preference number: 2 (lower is better)
Translates to: QTIKVILPLKTEAHG*ASDLQDGSHHTSHV
Trigger: AACATGAGATGTGTGATGACTGCCATCCTGAAGATCTGAAGCCAAACCATGTGCCTCAGTCTTGAGTGGAAGAATCACCTTTATGGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR CCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCGTATTTTGGCTTTTATaGTCTTACTCTAGCCACTAT +
Preference number: 2 (lower is better)
Translates to: LWEAISGRSSEVLSLRPAVFWLL*SYSSHY
Trigger: ATAGTGGCTAGAGTAAGACCATAAAAGCCAAAATAC...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR CAA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGACTGAGGCACATGGTTaGGCTTCAGATCTTCAGGAT +
Preference number: 3 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRTEAHG*ASDLQD
Trigger: ATCCTGAAGATCTGAAGCCAAACCATGTGCCTCAGT...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR CAA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCTGTAAAGTAGATGTGTaGCCCACATCTTCCCTGGTG +
Preference number: 3 (lower is better)
Translates to: LWEAISGRSSEVLSLRPACKVDV*PTSSLV
Trigger: CACCAGGGAAGATGTGGGCAACACATCTACTTTACA...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR CAA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTACTGAGGCACATGGTTaGGCTTCAGATCTTCAGGAT +
Preference number: 3 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRTEAHG*ASDLQD
Trigger: ATCCTGAAGATCTGAAGCCAAACCATGTGCCTCAGT...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR CAA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGTCTCTAACTCAAATTTaGTCACGTTGTCCCTCCCAA +
Preference number: 3 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRSLTQI*SRCPSQ
Trigger: TTGGGAGGGACAACGTGACAAAATTTGAGTTAGAGA...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR GCA 72 bp GATGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTaGGTTACCCCACTGCCCCATTACAACATCAGAGGA +
Preference number: 3 (lower is better)
Translates to: DVSYFAYPGRQM*VTPLPHYNIRG
Trigger: TCCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR CAA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGCTTCTTTGTAGCCAGTaGTCTTTTCAGTTTACCTTT +
Preference number: 3 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRLLCSQ*SFQFTF
Trigger: AAAGGTAAACTGAAAAGACAACTGGCTACAAAGAAG...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR CAA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGTCAAATTTTGTCACGTaGTCCCTCCCAACTTATTTT +
Preference number: 3 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRSNFVT*SLPTYF
Trigger: AAAATAAGTTGGGAGGGACAACGTGACAAAATTTGA...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR CAA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTTCTCTAACTCAAATTTaGTCACGTTGTCCCTCCCAA +
Preference number: 3 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRSLTQI*SRCPSQ
Trigger: TTGGGAGGGACAACGTGACAAAATTTGAGTTAGAGA...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR CAA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCACTTCTTTGTAGCCAGTaGTCTTTTCAGTTTACCTTT +
Preference number: 3 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPLLCSQ*SFQFTF
Trigger: AAAGGTAAACTGAAAAGACAACTGGCTACAAAGAAG...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR CAA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACACTTCTTTGTAGCCAGTaGTCTTTTCAGTTTACCTTT +
Preference number: 3 (lower is better)
Translates to: TLHTLAGKCALPHCPITTLLCSQ*SFQFTF
Trigger: AAAGGTAAACTGAAAAGACAACTGGCTACAAAGAAG...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR-3UTR CAA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAAATTTTGTCACGTaGTCCCTCCCAACTTATTTT +
Preference number: 3 (lower is better)
Translates to: TLHTLAGKCALPHCPITTSNFVT*SLPTYF
Trigger: AAAATAAGTTGGGAGGGACAACGTGACAAAATTTGA...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR TCA 72 bp TCCACAAACCATAAAGGTGATTCTTCCACTCAAGACTaGGGCACATGGTTTGGCTTCAGATCTTCAGGATGG +
Preference number: 3 (lower is better)
Translates to: STNHKGDSSTQD*GTWFGFRSSGW
Trigger: CCATCCTGAAGATCTGAAGCCAAACCATGTGCCTCAGTCTTGAGTGGAAGAATCACCTTTATGGTTTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGGGCAGAAGAATGGCATaGACCCGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRGRRMA*TREVEV
Trigger: AACCTCCACCTCCCGGGTTCATGCCATTCTTCTGCC...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGGATGGCGAGCGATGTTaGTTCTGCTCGCAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRDGERC*FCSQSP
Trigger: TGGGGACTGCGAGCAGAAGCAACATCGCTCGCCATC...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGTCACCTAGGCTGGGGTaGAGTGGCGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRSPRLG*SGVISA
Trigger: AGCTGAGATCACGCCACTGCACCCCAGCCTAGGTGA...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACAGGTACCACGGTTGTGTaGCAGAGAGAGTACAGGCGC +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTGTTVV*QREYRR
Trigger: GCGCCTGTACTCTCTCTGTCACACAACCGTGGTACC...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACAGGCAGAAGAATGGCATaGACCCGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTGRRMA*TREVEV
Trigger: AACCTCCACCTCCCGGGTTCATGCCATTCTTCTGCC...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCAGGCAGAAGAATGGCATaGACCCGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPGRRMA*TREVEV
Trigger: AACCTCCACCTCCCGGGTTCATGCCATTCTTCTGCC...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACAGATGGCGAGCGATGTTaGTTCTGCTCGCAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTDGERC*FCSQSP
Trigger: TGGGGACTGCGAGCAGAAGCAACATCGCTCGCCATC...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCCCTGGCAGGCAAATGTaGGTTACCCCACTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: LWEAISGRSSEVLSLRPAPGRQM*VTPLPH
Trigger: ATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGG...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCACCTGGCAGGCAAATGTaGGTTACCCCACTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPPGRQM*VTPLPH
Trigger: ATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGG...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCACCTAGGCTGGGGTaGAGTGGCGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTSPRLG*SGVISA
Trigger: AGCTGAGATCACGCCACTGCACCCCAGCCTAGGTGA...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGACTGAGGCAGAAGAATaGCATGAACCCGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRTEAEE*HEPGRW
Trigger: CCACCTCCCGGGTTCATGCCATTCTTCTGCCTCAGT...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGGCAACCTCCGCATCCTaGGTTCAAGTGATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRATSAS*VQVISC
Trigger: GCAGGAGATCACTTGAACCCAGGATGCGGAGGTTGC...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCATTTGGAGAGGAGTATaGAGGCCACGCACACACCGG +
Preference number: 4 (lower is better)
Translates to: LWEAISGRSSEVLSLRPAIWRGV*RPRTHR
Trigger: CCGGTGTGTGCGTGGCCTTCATACTCCTCTCCAAAT...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACAATTTGGAGAGGAGTATaGAGGCCACGCACACACCGG +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTIWRGV*RPRTHR
Trigger: CCGGTGTGTGCGTGGCCTTCATACTCCTCTCCAAAT...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGGAACTCCTGATCTCATaGTTCACCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRELLIS*FTCLSL
Trigger: GAGGCTGAGGCAGGTGAATCATGAGATCAGGAGTTC...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTGATGGCGAGCGATGTTaGTTCTGCTCGCAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRDGERC*FCSQSP
Trigger: TGGGGACTGCGAGCAGAAGCAACATCGCTCGCCATC...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGTCGCTTCCGGCACACTaGGGAATGCTATTCCACAGA +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRSLPAH*GMLFHR
Trigger: TCTGTGGAATAGCATTCCCCAGTGTGCCGGAAGCGA...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCAACTGAGGCAGAAGAATaGCATGAACCCGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPTEAEE*HEPGRW
Trigger: CCACCTCCCGGGTTCATGCCATTCTTCTGCCTCAGT...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCAGCAACCTCCGCATCCTaGGTTCAAGTGATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPATSAS*VQVISC
Trigger: GCAGGAGATCACTTGAACCCAGGATGCGGAGGTTGC...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCGCAACCTCCGCATCCTaGGTTCAAGTGATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LWEAISGRSSEVLSLRPAATSAS*VQVISC
Trigger: GCAGGAGATCACTTGAACCCAGGATGCGGAGGTTGC...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGTCTTCCACTCAAGACTaGGGCACATGGTTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRSSTQD*GTWFGF
Trigger: GAAGCCAAACCATGTGCCTCAGTCTTGAGTGGAAGA...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCGAACTCCTGATCTCATaGTTCACCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LWEAISGRSSEVLSLRPAELLIS*FTCLSL
Trigger: GAGGCTGAGGCAGGTGAATCATGAGATCAGGAGTTC...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACAGAACTCCTGATCTCATaGTTCACCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTELLIS*FTCLSL
Trigger: GAGGCTGAGGCAGGTGAATCATGAGATCAGGAGTTC...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCAGAGCGATGTTGCTTCTaGTCGCAGTCCCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPERCCF*SQSPFL
Trigger: CAGAAATGGGGACTGCGAGCAGAAGCAACATCGCTC...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATGTCTGCCTCACTTTTaGACCCGTCCAAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPCLPHF*TRPSTG
Trigger: ACCTGTGCTTGGACGGGTGCAAAAGTGAGGCAGACA...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGTGTGCGTTACCCCACTaGCCCATTACAACATCAGAG +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRCALPH*PITTSE
Trigger: CTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACA...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACACAGTATTATAGACTGTaGGCGGTGGCTCACGCCTGT +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTQYYRL*AVAHAC
Trigger: ACAGGCGTGAGCCACCGCGCACAGTCTATAATACTG...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCACAGTATTATAGACTGTaGGCGGTGGCTCACGCCTGT +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPQYYRL*AVAHAC
Trigger: ACAGGCGTGAGCCACCGCGCACAGTCTATAATACTG...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGGTTCAAGTGATCTCCTaGCTCAGCCTCCCAAATAGC +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRVQVIS*LSLPNS
Trigger: GCTATTTGGGAGGCTGAGGCAGGAGATCACTTGAAC...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCACTGCCTCCTTTCCCCTaGCCATTTTTCTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPLPPFP*PFFWAH
Trigger: ATGTGCCCAGAAAAATGGGCAGGGGAAAGGAGGCAG...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCCTGCCTCCTTTCCCCTaGCCATTTTTCTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: LWEAISGRSSEVLSLRPALPPFP*PFFWAH
Trigger: ATGTGCCCAGAAAAATGGGCAGGGGAAAGGAGGCAG...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCTCGCTTCCGGCACACTaGGGAATGCTATTCCACAGA +
Preference number: 4 (lower is better)
Translates to: LWEAISGRSSEVLSLRPASLPAH*GMLFHR
Trigger: TCTGTGGAATAGCATTCCCCAGTGTGCCGGAAGCGA...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGAGGTACACTTTATGGTaGCGGCCTCATGAGTGTAGT +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRRYTLW*RPHECS
Trigger: ACTACACTCATGAGGCCGTCACCATAAAGTGTACCT...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCTTCCACTCAAGACTaGGGCACATGGTTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTSSTQD*GTWFGF
Trigger: GAAGCCAAACCATGTGCCTCAGTCTTGAGTGGAAGA...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGTTCAGGCAGATCATCTaGGGTCTTGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRFRQII*GLEFET
Trigger: GGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAA...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTGAGCGATGTTGCTTCTaGTCGCAGTCCCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRERCCF*SQSPFL
Trigger: CAGAAATGGGGACTGCGAGCAGAAGCAACATCGCTC...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGAGAAGGGCATCCGGTTaGGGAGAAGGTACACTTTAT +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRRRASG*GEGTLY
Trigger: ATAAAGTGTACCTTCTCCGCAACCGGATGCCCTTCT...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTTGTCTGCCTCACTTTTaGACCCGTCCAAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRCLPHF*TRPSTG
Trigger: ACCTGTGCTTGGACGGGTGCAAAAGTGAGGCAGACA...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCCACTGTGAACTTGTCTaGCTCACTTTTGCACCCGTC +
Preference number: 4 (lower is better)
Translates to: LWEAISGRSSEVLSLRPAHCELV*LTFAPV
Trigger: GACGGGTGCAAAAGTGAGGCAGACAAGTTCACAGTG...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACACACTGTGAACTTGTCTaGCTCACTTTTGCACCCGTC +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTHCELV*LTFAPV
Trigger: GACGGGTGCAAAAGTGAGGCAGACAAGTTCACAGTG...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATGTGCGTTACCCCACTaGCCCATTACAACATCAGAG +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPCALPH*PITTSE
Trigger: CTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACA...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTCAGTATTATAGACTGTaGGCGGTGGCTCACGCCTGT +
Preference number: 4 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRQYYRL*AVAHAC
Trigger: ACAGGCGTGAGCCACCGCGCACAGTCTATAATACTG...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACAGTTCAAGTGATCTCCTaGCTCAGCCTCCCAAATAGC +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTVQVIS*LSLPNS
Trigger: GCTATTTGGGAGGCTGAGGCAGGAGATCACTTGAAC...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCGTTCAAGTGATCTCCTaGCTCAGCCTCCCAAATAGC +
Preference number: 4 (lower is better)
Translates to: LWEAISGRSSEVLSLRPAVQVIS*LSLPNS
Trigger: GCTATTTGGGAGGCTGAGGCAGGAGATCACTTGAAC...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCAAAAATGAGGTTCCATaGTGCCTCCTTTCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LWEAISGRSSEVLSLRPAKNEVP*CLLSPA
Trigger: GGCAGGGGAAAGGAGGCAGCATGGAACCTCATTTTT...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACAAAAAATGAGGTTCCATaGTGCCTCCTTTCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTKNEVP*CLLSPA
Trigger: GGCAGGGGAAAGGAGGCAGCATGGAACCTCATTTTT...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCAAAAAATGAGGTTCCATaGTGCCTCCTTTCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPKNEVP*CLLSPA
Trigger: GGCAGGGGAAAGGAGGCAGCATGGAACCTCATTTTT...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGAGATTGGTTTGCAGATaGCGAGCGATGTTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRRLVCR*RAMLLL
Trigger: CAGAAGCAACATCGCTCGCCATCTGCAAACCAATCT...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCAAAACCACAGGCATGTTaGTTGCTCAGAAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPKPQAC*LLRRAS
Trigger: GGATGCCCTTCTGAGCAACCAACATGCCTGTGGTTT...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCAAACCACAGGCATGTTaGTTGCTCAGAAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: LWEAISGRSSEVLSLRPAKPQAC*LLRRAS
Trigger: GGATGCCCTTCTGAGCAACCAACATGCCTGTGGTTT...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGTGCCCACATCTTCCCTaGTGCTGTTATTTGGCACAA +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRCPHLP*CCYLAQ
Trigger: TTGTGCCAAATAACAGCACCAGGGAAGATGTGGGCA...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGCCCTGCCCATTTTTCTaGGCACATAGGATCAGGAAA +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRPCPFF*AHRIRK
Trigger: TTTCCTGATCCTATGTGCCCAGAAAAATGGGCAGGG...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCAGGTACACTTTATGGTaGCGGCCTCATGAGTGTAGT +
Preference number: 4 (lower is better)
Translates to: LWEAISGRSSEVLSLRPARYTLW*RPHECS
Trigger: ACTACACTCATGAGGCCGTCACCATAAAGTGTACCT...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGATAGACAGAGAGCAGTaGTACAAGAGCTGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRIDREQ*YKSCQE
Trigger: TTCCTGACAGCTCTTGTATCACTGCTCTCTGTCTAT...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCTTCAGGCAGATCATCTaGGGTCTTGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: LWEAISGRSSEVLSLRPAFRQII*GLEFET
Trigger: GGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAA...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATTCAGGCAGATCATCTaGGGTCTTGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTFRQII*GLEFET
Trigger: GGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAA...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCAAGAAGGGCATCCGGTTaGGGAGAAGGTACACTTTAT +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPRRASG*GEGTLY
Trigger: ATAAAGTGTACCTTCTCCGCAACCGGATGCCCTTCT...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTCACTGTGAACTTGTCTaGCTCACTTTTGCACCCGTC +
Preference number: 4 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRHCELV*LTFAPV
Trigger: GACGGGTGCAAAAGTGAGGCAGACAAGTTCACAGTG...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGCGGCACACTGGGGAATaGTATTCCACAGATGTAAAT +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRRHTGE*YSTDVN
Trigger: ATTTACATCTGTGGAATAGCATTCCCCAGTGTGCCG...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTTGTGCGTTACCCCACTaGCCCATTACAACATCAGAG +
Preference number: 4 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRCALPH*PITTSE
Trigger: CTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACA...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACAAGATTGGTTTGCAGATaGCGAGCGATGTTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTRLVCR*RAMLLL
Trigger: CAGAAGCAACATCGCTCGCCATCTGCAAACCAATCT...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCAAGATTGGTTTGCAGATaGCGAGCGATGTTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPRLVCR*RAMLLL
Trigger: CAGAAGCAACATCGCTCGCCATCTGCAAACCAATCT...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACAACAGTGAGGGAAACTTaGTTTTCTTTGAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTTVRET*FSLRAS
Trigger: GGAGGCCCTCAAAGAAAACCAAGTTTCCCTCACTGT...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATGCCCACATCTTCCCTaGTGCTGTTATTTGGCACAA +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTCPHLP*CCYLAQ
Trigger: TTGTGCCAAATAACAGCACCAGGGAAGATGTGGGCA...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCACCCTGCCCATTTTTCTaGGCACATAGGATCAGGAAA +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPPCPFF*AHRIRK
Trigger: TTTCCTGATCCTATGTGCCCAGAAAAATGGGCAGGG...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCCCCTGCCCATTTTTCTaGGCACATAGGATCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LWEAISGRSSEVLSLRPAPCPFF*AHRIRK
Trigger: TTTCCTGATCCTATGTGCCCAGAAAAATGGGCAGGG...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGCGACACAAAATAGAATaGGATTGGTTTGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRRHKIE*DWFADG
Trigger: GCCATCTGCAAACCAATCTCATTCTATTTTGTGTCG...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACAATAGACAGAGAGCAGTaGTACAAGAGCTGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTIDREQ*YKSCQE
Trigger: TTCCTGACAGCTCTTGTATCACTGCTCTCTGTCTAT...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCATAGACAGAGAGCAGTaGTACAAGAGCTGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LWEAISGRSSEVLSLRPAIDREQ*YKSCQE
Trigger: TTCCTGACAGCTCTTGTATCACTGCTCTCTGTCTAT...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATATTTGGCACAACACTaGCATCTAGAGTCCGTTGTG +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPYLAQH*HLESVV
Trigger: CACAACGGACTCTAGATGTCAGTGTTGTGCCAAATA...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATATTTGGCACAACACTaGCATCTAGAGTCCGTTGTG +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTYLAQH*HLESVV
Trigger: CACAACGGACTCTAGATGTCAGTGTTGTGCCAAATA...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCACCATGCCTCCTATCTaGCATTTCCCTCCTAAATTG +
Preference number: 4 (lower is better)
Translates to: LWEAISGRSSEVLSLRPATMPPI*HFPPKL
Trigger: CAATTTAGGAGGGAAATGTCAGATAGGAGGCATGGT...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACAACCATGCCTCCTATCTaGCATTTCCCTCCTAAATTG +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTTMPPI*HFPPKL
Trigger: CAATTTAGGAGGGAAATGTCAGATAGGAGGCATGGT...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACAAGAATGAGATTGGTTTaGAGATGGCGAGCGATGTTG +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTRMRLV*RWRAML
Trigger: CAACATCGCTCGCCATCTGCAAACCAATCTCATTCT...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCAAGAATGAGATTGGTTTaGAGATGGCGAGCGATGTTG +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPRMRLV*RWRAML
Trigger: CAACATCGCTCGCCATCTGCAAACCAATCTCATTCT...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTAGAAGGGCATCCGGTTaGGGAGAAGGTACACTTTAT +
Preference number: 4 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRRRASG*GEGTLY
Trigger: ATAAAGTGTACCTTCTCCGCAACCGGATGCCCTTCT...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACACGGCACACTGGGGAATaGTATTCCACAGATGTAAAT +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTRHTGE*YSTDVN
Trigger: ATTTACATCTGTGGAATAGCATTCCCCAGTGTGCCG...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCACGGCACACTGGGGAATaGTATTCCACAGATGTAAAT +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPRHTGE*YSTDVN
Trigger: ATTTACATCTGTGGAATAGCATTCCCCAGTGTGCCG...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTACAGTGAGGGAAACTTaGTTTTCTTTGAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRTVRET*FSLRAS
Trigger: GGAGGCCCTCAAAGAAAACCAAGTTTCCCTCACTGT...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTCTGAGGCACATGGTTTaGCTTCAGATCTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRLRHMV*LQIFRM
Trigger: CATCCTGAAGATCTGAAGCCAAACCATGTGCCTCAG...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACTTTGCATACCCTaGCAGGCAAATGTGCGTTAC +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPLLCIP*QANVRY
Trigger: GTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAA...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATTACTTTGCATACCCTaGCAGGCAAATGTGCGTTAC +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTLLCIP*QANVRY
Trigger: GTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAA...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTTGCCCACATCTTCCCTaGTGCTGTTATTTGGCACAA +
Preference number: 4 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRCPHLP*CCYLAQ
Trigger: TTGTGCCAAATAACAGCACCAGGGAAGATGTGGGCA...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGTCACTCTGTTTACAGTaGGGGAAACTTGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRSLCLQ*GKLGFL
Trigger: AAGAAAACCAAGTTTCCCTCACTGTAAACAGAGTGA...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTCGACACAAAATAGAATaGGATTGGTTTGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRRHKIE*DWFADG
Trigger: GCCATCTGCAAACCAATCTCATTCTATTTTGTGTCG...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGAATTGCACTGTCATTTaGAGTCACTCTGTTTACAGT +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRNCTVI*SHSVYS
Trigger: ACTGTAAACAGAGTGACTTCAAATGACAGTGCAATT...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATCACACATCTCATGTTaGATGAAACAGACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPSHISC*MKQTQD
Trigger: ATCCTGAGTCTGTTTCATTCAACATGAGATGTGTGA...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCAGTGGCTTATTTGTTCTaGAGTTACCTCTGTTTAACC +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPVAYLF*SYLCLT
Trigger: GGTTAAACAGAGGTAACTTCAGAACAAATAAGCCAC...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACAAATATCCTTGTACCATaGCTCCTATCTGACATTTCC +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTNILVP*LLSDIS
Trigger: GGAAATGTCAGATAGGAGGCATGGTACAAGGATATT...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR GCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCAAATATCCTTGTACCATaGCTCCTATCTGACATTTCC +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPNILVP*LLSDIS
Trigger: GGAAATGTCAGATAGGAGGCATGGTACAAGGATATT...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR CAA 72 bp AAGGTGATTCTTCCACTCAAGACTGAGGCACATGGTTaGGCTTCAGATCTTCAGGATGGCAGTCATCACACA +
Preference number: 4 (lower is better)
Translates to: KVILPLKTEAHG*ASDLQDGSHHT
Trigger: TGTGTGATGACTGCCATCCTGAAGATCTGAAGCCAAACCATGTGCCTCAGTCTTGAGTGGAAGAATCACCTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTTCACTCTGTTTACAGTaGGGGAAACTTGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRSLCLQ*GKLGFL
Trigger: AAGAAAACCAAGTTTCCCTCACTGTAAACAGAGTGA...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACAAATTGCACTGTCATTTaGAGTCACTCTGTTTACAGT +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTNCTVI*SHSVYS
Trigger: ACTGTAAACAGAGTGACTTCAAATGACAGTGCAATT...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTGTGGCTTATTTGTTCTaGAGTTACCTCTGTTTAACC +
Preference number: 4 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRVAYLF*SYLCLT
Trigger: GGTTAAACAGAGGTAACTTCAGAACAAATAAGCCAC...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATGTTTCTTAGAGGGTTaGATTTTGATTTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTCFLEG*ILIWRG
Trigger: TCCTCTCCAAATCAAAATCCAACCCTCTAAGAAACA...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGATGGCCTTTCATAGTTaGAAAGTACTCTTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRMAFHS*KVLFCF
Trigger: AAAACAGAAGAGTACTTTCCAACTATGAAAGGCCAT...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR TCA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTAATTGCACTGTCATTTaGAGTCACTCTGTTTACAGT +
Preference number: 4 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRNCTVI*SHSVYS
Trigger: ACTGTAAACAGAGTGACTTCAAATGACAGTGCAATT...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTTGTTTCTTAGAGGGTTaGATTTTGATTTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRCFLEG*ILIWRG
Trigger: TCCTCTCCAAATCAAAATCCAACCCTCTAAGAAACA...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACAATGGCCTTTCATAGTTaGAAAGTACTCTTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: TLHTLAGKCALPHCPITTMAFHS*KVLFCF
Trigger: AAAACAGAAGAGTACTTTCCAACTATGAAAGGCCAT...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCATGGCCTTTCATAGTTaGAAAGTACTCTTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LWEAISGRSSEVLSLRPAMAFHS*KVLFCF
Trigger: AAAACAGAAGAGTACTTTCCAACTATGAAAGGCCAT...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCAGTATTTTGGCTTTTATaGTCTTACTCTAGCCACTAT +
Preference number: 4 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPVFWLL*SYSSHY
Trigger: ATAGTGGCTAGAGTAAGACCATAAAAGCCAAAATAC...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CCA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTGTATTTTGGCTTTTATaGTCTTACTCTAGCCACTAT +
Preference number: 4 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRVFWLL*SYSSHY
Trigger: ATAGTGGCTAGAGTAAGACCATAAAAGCCAAAATAC...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
3UTR CAA 72 bp AATCAGTATTACAAACGTGCTTGTAAAGTAGATGTGTaGCCCACATCTTCCCTGGTGCTGTTATTTGGCACA +
Preference number: 4 (lower is better)
Translates to: NQYYKRACKVDV*PTSSLVLLFGT
Trigger: TGTGCCAAATAACAGCACCAGGGAAGATGTGGGCAACACATCTACTTTACAAGCACGTTTGTAATACTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGAGATGGCGAGCGATGTaGCTTCTGCTCGCAGTCCCC +
Preference number: 5 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRRWRAM*LLLAVP
Trigger: GGGGACTGCGAGCAGAAGCAACATCGCTCGCCATCT...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACAAGATGGCGAGCGATGTaGCTTCTGCTCGCAGTCCCC +
Preference number: 5 (lower is better)
Translates to: TLHTLAGKCALPHCPITTRWRAM*LLLAVP
Trigger: GGGGACTGCGAGCAGAAGCAACATCGCTCGCCATCT...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS TCA 90 bp GAGTATGAAGGCCACGCACACACCGGTCACATAGACAGAGAGCAGTaGTACAAGAGCTGTCAGGAAGCTCCGCAGTTCCTTGCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: EYEGHAHTGHIDREQ*YKSCQEAPQFLAEQ
Trigger: CTGCTCAGCAAGGAACTGCGGAGCTTCCTGACAGCTCTTGTATCACTGCTCTCTGTCTATGTGACCGGTGTGTGCGTGGCCTTCATACTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268389.6
ENST00000569602.1
ENST00000638543.2
ENST00000639480.2
CDS CCA 90 bp CAGGTTCTCAGGCTGGTGAGCACCGTAGCGAAACCACAGGCATGTTaGTTGCTCAGAAGGGCATCCGGTTGCGGAGAAGGTACACTTTAT +
Preference number: 5 (lower is better)
Translates to: QVLRLVSTVAKPQAC*LLRRASGCGEGTLY
Trigger: ATAAAGTGTACCTTCTCCGCAACCGGATGCCCTTCTGAGCAACCAACATGCCTGTGGTTTCGCTACGGTGCTCACCAGCCTGAGAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268389.6
ENST00000565499.1
ENST00000569602.1
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACACCACAGGCATGTTGGTaGCTCAGAAGGGCATCCGGT +
Preference number: 5 (lower is better)
Translates to: TLHTLAGKCALPHCPITTPQACW*LRRASG
Trigger: ACCGGATGCCCTTCTGAGCAACCAACATGCCTGTGG...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS TCA 90 bp GTTGCTCAGAAGGGCATCCGGTTGCGGAGAAGGTACACTTTATGGTaGCGGCCTCATGAGTGTAGTCCACTTCTAGGTACCACGGTTGTG +
Preference number: 5 (lower is better)
Translates to: VAQKGIRLRRRYTLW*RPHECSPLLGTTVV
Trigger: CACAACCGTGGTACCTAGAAGTGGACTACACTCATGAGGCCGTCACCATAAAGTGTACCTTCTCCGCAACCGGATGCCCTTCTGAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268389.6
ENST00000565499.1
ENST00000569602.1
ENST00000638543.2
ENST00000639480.2
CDS GCA 90 bp GGAAACTTGGTTTTCTTTGAGGGCCTCCCTCACTGTGAACTTGTCTaGCTCACTTTTGCACCCGTCCAAGCACAGGTTCTCAGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GNLVFFEGLPHCELV*LTFAPVQAQVLRLV
Trigger: CACCAGCCTGAGAACCTGTGCTTGGACGGGTGCAAAAGTGAGGCAGACAAGTTCACAGTGAGGGAGGCCCTCAAAGAAAACCAAGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268389.6
ENST00000565499.1
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGCAGAAGGGCATCCGGTaGCGGAGAAGGTACACTTTA +
Preference number: 5 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRQKGIR*RRRYTL
Trigger: TAAAGTGTACCTTCTCCGCAACCGGATGCCCTTCTG...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTCCACAGGCATGTTGGTaGCTCAGAAGGGCATCCGGT +
Preference number: 5 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRPQACW*LRRASG
Trigger: ACCGGATGCCCTTCTGAGCAACCAACATGCCTGTGG...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTGTCTGCCTCACTTTaGCACCCGTCCAAGCACAGG +
Preference number: 5 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPLSASL*HPSKHR
Trigger: CCTGTGCTTGGACGGGTGCAAAAGTGAGGCAGACAA...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS GCA 90 bp GTACAGGCGCCCACAGCACCGACACAAAATAGAATGAGATTGGTTTaGAGATGGCGAGCGATGTTGCTTCTGCTCGCAGTCCCCATTTCT +
Preference number: 5 (lower is better)
Translates to: VQAPTAPTQNRMRLV*RWRAMLLLLAVPIS
Trigger: AGAAATGGGGACTGCGAGCAGAAGCAACATCGCTCGCCATCTGCAAACCAATCTCATTCTATTTTGTGTCGGTGCTGTGGGCGCCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268389.6
ENST00000565499.1
ENST00000569602.1
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCACAGAAGGGCATCCGGTaGCGGAGAAGGTACACTTTA +
Preference number: 5 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPQKGIR*RRRYTL
Trigger: TAAAGTGTACCTTCTCCGCAACCGGATGCCCTTCTG...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCAGAAACCACAGGCATGTaGGTTGCTCAGAAGGGCATC +
Preference number: 5 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPETTGM*VAQKGI
Trigger: GATGCCCTTCTGAGCAACCAACATGCCTGTGGTTTC...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTTTGTCTGCCTCACTTTaGCACCCGTCCAAGCACAGG +
Preference number: 5 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRLSASL*HPSKHR
Trigger: CCTGTGCTTGGACGGGTGCAAAAGTGAGGCAGACAA...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCTCCCTCACTGTGAACTaGTCTGCCTCACTTTTGCAC +
Preference number: 5 (lower is better)
Translates to: LWEAISGRSSEVLSLRPASLTVN*SASLLH
Trigger: GTGCAAAAGTGAGGCAGACAAGTTCACAGTGAGGGA...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATCCCTCACTGTGAACTaGTCTGCCTCACTTTTGCAC +
Preference number: 5 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPSLTVN*SASLLH
Trigger: GTGCAAAAGTGAGGCAGACAAGTTCACAGTGAGGGA...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCGAAACTTGGTTTTCTTaGAGGGCCTCCCTCACTGTG +
Preference number: 5 (lower is better)
Translates to: LWEAISGRSSEVLSLRPAETWFS*RASLTV
Trigger: CACAGTGAGGGAGGCCCTCAAAGAAAACCAAGTTTC...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCAGAAACTTGGTTTTCTTaGAGGGCCTCCCTCACTGTG +
Preference number: 5 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPETWFS*RASLTV
Trigger: CACAGTGAGGGAGGCCCTCAAAGAAAACCAAGTTTC...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGTACAGTGAGGGAAACTaGGTTTTCTTTGAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRYSEGN*VFFEGL
Trigger: GAGGCCCTCAAAGAAAACCAAGTTTCCCTCACTGTA...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTTCTGAGGTCTTGAGTTaGAGACCAGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRSEVLS*RPAWPT
Trigger: TGTTGGCCAGGCTGGTCTCAAACTCAAGACCTCAGA...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCAAGATCATCTGAGGTCTaGAGTTTGAGACCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPRSSEV*SLRPAW
Trigger: CCAGGCTGGTCTCAAACTCAAGACCTCAGATGATCT...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGCAAAATAGAATGAGATaGGTTTGCAGATGGCGAGCG +
Preference number: 5 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRQNRMR*VCRWRA
Trigger: CGCTCGCCATCTGCAAACCAATCTCATTCTATTTTG...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTTCCCTCACTGTGAACTaGTCTGCCTCACTTTTGCAC +
Preference number: 5 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRSLTVN*SASLLH
Trigger: GTGCAAAAGTGAGGCAGACAAGTTCACAGTGAGGGA...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCTACAGTGAGGGAAACTaGGTTTTCTTTGAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: LWEAISGRSSEVLSLRPAYSEGN*VFFEGL
Trigger: GAGGCCCTCAAAGAAAACCAAGTTTCCCTCACTGTA...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATACAGTGAGGGAAACTaGGTTTTCTTTGAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPYSEGN*VFFEGL
Trigger: GAGGCCCTCAAAGAAAACCAAGTTTCCCTCACTGTA...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCAAAGCTCCGCAGTTCCTaGCTGAGCAGCTTAATTTCT +
Preference number: 5 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPKLRSS*LSSLIS
Trigger: AGAAATTAAGCTGCTCAGCAAGGAACTGCGGAGCTT...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCAACTGAGGCACATGGTTaGGCTTCAGATCTTCAGGAT +
Preference number: 5 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPTEAHG*ASDLQD
Trigger: ATCCTGAAGATCTGAAGCCAAACCATGTGCCTCAGT...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCACTGAGGCACATGGTTaGGCTTCAGATCTTCAGGAT +
Preference number: 5 (lower is better)
Translates to: LWEAISGRSSEVLSLRPATEAHG*ASDLQD
Trigger: ATCCTGAAGATCTGAAGCCAAACCATGTGCCTCAGT...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATGTAAAGTAGATGTGTaGCCCACATCTTCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: TLHTLAGKCALPHCPITTCKVDV*PTSSLV
Trigger: CACCAGGGAAGATGTGGGCAACACATCTACTTTACA...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTAGATCATCTGAGGTCTaGAGTTTGAGACCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRRSSEV*SLRPAW
Trigger: CCAGGCTGGTCTCAAACTCAAGACCTCAGATGATCT...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS TCA 90 bp CCACGCCCAGCCAGTTGGAGTAGTTCTTTAGTCCAAACCTCATGGTaGCTTGTGTTCAGATCACACCCATCACTGGCTAGGGTATTAACT +
Preference number: 5 (lower is better)
Translates to: PRPASWSSSLVQTSW*LVFRSHPSLARVLT
Trigger: AGTTAATACCCTAGCCAGTGATGGGTGTGATCTGAACACAAGTCACCATGAGGTTTGGACTAAAGAACTACTCCAACTGGCTGGGCGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565499.1
CDS-3UTR CAA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCCAAAATAGAATGAGATaGGTTTGCAGATGGCGAGCG +
Preference number: 5 (lower is better)
Translates to: LWEAISGRSSEVLSLRPAQNRMR*VCRWRA
Trigger: CGCTCGCCATCTGCAAACCAATCTCATTCTATTTTG...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCACAAAATAGAATGAGATaGGTTTGCAGATGGCGAGCG +
Preference number: 5 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPQNRMR*VCRWRA
Trigger: CGCTCGCCATCTGCAAACCAATCTCATTCTATTTTG...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTAAGCTCCGCAGTTCCTaGCTGAGCAGCTTAATTTCT +
Preference number: 5 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRKLRSS*LSSLIS
Trigger: AGAAATTAAGCTGCTCAGCAAGGAACTGCGGAGCTT...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTTGTAAAGTAGATGTGTaGCCCACATCTTCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRCKVDV*PTSSLV
Trigger: CACCAGGGAAGATGTGGGCAACACATCTACTTTACA...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATCTCTAACTCAAATTTaGTCACGTTGTCCCTCCCAA +
Preference number: 5 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPSLTQI*SRCPSQ
Trigger: TTGGGAGGGACAACGTGACAAAATTTGAGTTAGAGA...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCTCTAACTCAAATTTaGTCACGTTGTCCCTCCCAA +
Preference number: 5 (lower is better)
Translates to: TLHTLAGKCALPHCPITTSLTQI*SRCPSQ
Trigger: TTGGGAGGGACAACGTGACAAAATTTGAGTTAGAGA...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGAAATTGCACTGTCATTaGAAGTCACTCTGTTTACAG +
Preference number: 5 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRKLHCH*KSLCLQ
Trigger: CTGTAAACAGAGTGACTTCAAATGACAGTGCAATTT...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp ATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACATCAGAGGTTCCACAGATGTAAATaGCACTGTCATTTGAAGTCA +
Preference number: 5 (lower is better)
Translates to: IPWQANVRYPTAPLQHQRFHRCK*HCHLKS
Trigger: TGACTTCAAATGACAGTGCAATTTACATCTGTGGAA...CCTCTGATGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp ACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTACAACAAAATTGCACTGTCATTaGAAGTCACTCTGTTTACAG +
Preference number: 5 (lower is better)
Translates to: TLHTLAGKCALPHCPITTKLHCH*KSLCLQ
Trigger: CTGTAAACAGAGTGACTTCAAATGACAGTGCAATTT...TGTTGTAATGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp TGTAAGTTACTTTGCATACCCTGGCAGGCAAATGTGCGTTACCCCACTGCCCCATTCCACAGATGTAAATaGCACTGTCATTTGAAGTCA +
Preference number: 5 (lower is better)
Translates to: CKLLCIPWQANVRYPTAPFHRCK*HCHLKS
Trigger: TGACTTCAAATGACAGTGCAATTTACATCTGTGGAA...TGGGGCAGTGGGGTAACGCACATTTGCCTGCCAGGGTATGCAAAGTAACTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCCTTCTTTGTAGCCAGTaGTCTTTTCAGTTTACCTTT +
Preference number: 5 (lower is better)
Translates to: LWEAISGRSSEVLSLRPALLCSQ*SFQFTF
Trigger: AAAGGTAAACTGAAAAGACAACTGGCTACAAAGAAG...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp CTTTGGGAGGCCATTTCAGGCAGATCATCTGAGGTCTTGAGTTTGAGACCAGCCTCAAATTTTGTCACGTaGTCCCTCCCAACTTATTTT +
Preference number: 5 (lower is better)
Translates to: LWEAISGRSSEVLSLRPASNFVT*SLPTYF
Trigger: AAAATAAGTTGGGAGGGACAACGTGACAAAATTTGA...GGCTGGTCTCAAACTCAAGACCTCAGATGATCTGCCTGAAATGGCCTCCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTAAATTGCACTGTCATTaGAAGTCACTCTGTTTACAG +
Preference number: 5 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRKLHCH*KSLCLQ
Trigger: CTGTAAACAGAGTGACTTCAAATGACAGTGCAATTT...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTGTTATCTTTCTCAGATaGCTGATTTGTTTCCACATG +
Preference number: 5 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRVIFLR*LICFHM
Trigger: CATGTGGAAACAAATCAGCAATCTGAGAAAGATAAC...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS-3UTR CAA 90 bp CCCACATCTTCCCTGGTGCTGTTATTTGGCACAACACTGACATCTAGAGTCCGTTCAAATTTTGTCACGTaGTCCCTCCCAACTTATTTT +
Preference number: 5 (lower is better)
Translates to: PTSSLVLLFGTTLTSRVRSNFVT*SLPTYF
Trigger: AAAATAAGTTGGGAGGGACAACGTGACAAAATTTGA...ACGGACTCTAGATGTCAGTGTTGTGCCAAATAACAGCACCAGGGAAGATGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS TCA 90 bp CACACTGGGGAATGCTATTCCACAGATGTAAATTGCACTGTCATTTaGAGTCACTCTGTTTACAGTGAGGGAAACTTGGTTTTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: HTGECYSTDVNCTVI*SHSVYSEGNLVFFE
Trigger: CTCAAAGAAAACCAAGTTTCCCTCACTGTAAACAGAGTGACTTCAAATGACAGTGCAATTTACATCTGTGGAATAGCATTCCCCAGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268389.6
ENST00000565499.1
ENST00000638543.2
ENST00000639480.2
CDS CCA 90 bp CTAGTTCCTGAGAAAGCTGATAGTTACTCACCACAAGGTTCCCTTTaGACATGGTACTTTACACTAAATCACTGTAATATACAAAAGAGG +
Preference number: 5 (lower is better)
Translates to: LVPEKADSYSPQGSL*TWYFTLNHCNIQKR
Trigger: CCTCTTTTGTATATTACAGTGATTTAGTGTAAAGTACCATGTCCAAAGGGAACCTTGTGGTGAGTAACTATCAGCTTTCTCAGGAACTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565499.1
CDS TCA 90 bp TGGACATGGTACTTTACACTAAATCACTGTAATATACAAAAGAGGTaGACATGGTTGGTTAAACATCACCATGTAGGGAGAATAGAGCAC +
Preference number: 5 (lower is better)
Translates to: WTWYFTLNHCNIQKR*TWLVKHHHVGRIEH
Trigger: GTGCTCTATTCTCCCTACATGGTGATGTTTAACCAACCATGTTCACCTCTTTTGTATATTACAGTGATTTAGTGTAAAGTACCATGTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565499.1
CDS TCA 72 bp CATGAGTGTAGTCCACTTCTAGGTACCACGGTTGTGTaGCAGAGAGAGTACAGGCGCCCACAGCACCGACAC +
Preference number: 6 (lower is better)
Translates to: HECSPLLGTTVV*QREYRRPQHRH
Trigger: GTGTCGGTGCTGTGGGCGCCTGTACTCTCTCTGTCACACAACCGTGGTACCTAGAAGTGGACTACACTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268389.6
ENST00000565499.1
ENST00000569602.1
ENST00000638543.2
ENST00000639480.2
CDS TCA 72 bp GGCCACGCACACACCGGTCACATAGACAGAGAGCAGTaGTACAAGAGCTGTCAGGAAGCTCCGCAGTTCCTT +
Preference number: 6 (lower is better)
Translates to: GHAHTGHIDREQ*YKSCQEAPQFL
Trigger: AAGGAACTGCGGAGCTTCCTGACAGCTCTTGTATCACTGCTCTCTGTCTATGTGACCGGTGTGTGCGTGGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268389.6
ENST00000569602.1
ENST00000638543.2
ENST00000639480.2
CDS CAA 90 bp GTTCTCAGGCTGGTGAGCACCGTAGCGAAACCACAGGCATGTTGGTaGCTCAGAAGGGCATCCGGTTGCGGAGAAGGTACACTTTATGGT +
Preference number: 6 (lower is better)
Translates to: VLRLVSTVAKPQACW*LRRASGCGEGTLYG
Trigger: ACCATAAAGTGTACCTTCTCCGCAACCGGATGCCCTTCTGAGCAACCAACATGCCTGTGGTTTCGCTACGGTGCTCACCAGCCTGAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268389.6
ENST00000565499.1
ENST00000569602.1
ENST00000638543.2
ENST00000639480.2
CDS CAA 90 bp ACAGGTTCTCAGGCTGGTGAGCACCGTAGCGAAACCACAGGCATGTaGGTTGCTCAGAAGGGCATCCGGTTGCGGAGAAGGTACACTTTA +
Preference number: 6 (lower is better)
Translates to: TGSQAGEHRSETTGM*VAQKGIRLRRRYTL
Trigger: TAAAGTGTACCTTCTCCGCAACCGGATGCCCTTCTGAGCAACCAACATGCCTGTGGTTTCGCTACGGTGCTCACCAGCCTGAGAACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268389.6
ENST00000565499.1
ENST00000569602.1
ENST00000638543.2
ENST00000639480.2
CDS CAA 90 bp GTGAGGGAAACTTGGTTTTCTTTGAGGGCCTCCCTCACTGTGAACTaGTCTGCCTCACTTTTGCACCCGTCCAAGCACAGGTTCTCAGGC +
Preference number: 6 (lower is better)
Translates to: VRETWFSLRASLTVN*SASLLHPSKHRFSG
Trigger: GCCTGAGAACCTGTGCTTGGACGGGTGCAAAAGTGAGGCAGACAAGTTCACAGTGAGGGAGGCCCTCAAAGAAAACCAAGTTTCCCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268389.6
ENST00000565499.1
ENST00000638543.2
ENST00000639480.2
CDS TCA 72 bp AAGGGCATCCGGTTGCGGAGAAGGTACACTTTATGGTaGCGGCCTCATGAGTGTAGTCCACTTCTAGGTACC +
Preference number: 6 (lower is better)
Translates to: KGIRLRRRYTLW*RPHECSPLLGT
Trigger: GGTACCTAGAAGTGGACTACACTCATGAGGCCGTCACCATAAAGTGTACCTTCTCCGCAACCGGATGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268389.6
ENST00000565499.1
ENST00000569602.1
ENST00000638543.2
ENST00000639480.2
CDS CAA 72 bp CAGGCGCCCACAGCACCGACACAAAATAGAATGAGATaGGTTTGCAGATGGCGAGCGATGTTGCTTCTGCTC +
Preference number: 6 (lower is better)
Translates to: QAPTAPTQNRMR*VCRWRAMLLLL
Trigger: GAGCAGAAGCAACATCGCTCGCCATCTGCAAACCAATCTCATTCTATTTTGTGTCGGTGCTGTGGGCGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268389.6
ENST00000565499.1
ENST00000569602.1
ENST00000638543.2
ENST00000639480.2
CDS CAA 72 bp ACTTGGTTTTCTTTGAGGGCCTCCCTCACTGTGAACTaGTCTGCCTCACTTTTGCACCCGTCCAAGCACAGG +
Preference number: 6 (lower is better)
Translates to: TWFSLRASLTVN*SASLLHPSKHR
Trigger: CCTGTGCTTGGACGGGTGCAAAAGTGAGGCAGACAAGTTCACAGTGAGGGAGGCCCTCAAAGAAAACCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268389.6
ENST00000565499.1
ENST00000638543.2
ENST00000639480.2
CDS TCA 72 bp GAGTACAGGCGCCCACAGCACCGACACAAAATAGAATaGGATTGGTTTGCAGATGGCGAGCGATGTTGCTTC +
Preference number: 6 (lower is better)
Translates to: EYRRPQHRHKIE*DWFADGERCCF
Trigger: GAAGCAACATCGCTCGCCATCTGCAAACCAATCTCATTCTATTTTGTGTCGGTGCTGTGGGCGCCTGTACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268389.6
ENST00000565499.1
ENST00000569602.1
ENST00000638543.2
ENST00000639480.2
CDS GCA 72 bp CCCACAGCACCGACACAAAATAGAATGAGATTGGTTTaGAGATGGCGAGCGATGTTGCTTCTGCTCGCAGTC +
Preference number: 6 (lower is better)
Translates to: PTAPTQNRMRLV*RWRAMLLLLAV
Trigger: GACTGCGAGCAGAAGCAACATCGCTCGCCATCTGCAAACCAATCTCATTCTATTTTGTGTCGGTGCTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268389.6
ENST00000565499.1
ENST00000569602.1
ENST00000638543.2
ENST00000639480.2
CDS TCA 72 bp GCCAGTTGGAGTAGTTCTTTAGTCCAAACCTCATGGTaGCTTGTGTTCAGATCACACCCATCACTGGCTAGG +
Preference number: 6 (lower is better)
Translates to: ASWSSSLVQTSW*LVFRSHPSLAR
Trigger: CCTAGCCAGTGATGGGTGTGATCTGAACACAAGTCACCATGAGGTTTGGACTAAAGAACTACTCCAACTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565499.1
CDS CAA 72 bp AGTGATACAAGAGCTGTCAGGAAGCTCCGCAGTTCCTaGCTGAGCAGCTTAATTTCTCTTACCACCAGTGTG +
Preference number: 6 (lower is better)
Translates to: SDTRAVRKLRSS*LSSLISLTTSV
Trigger: CACACTGGTGGTAAGAGAAATTAAGCTGCTCAGCAAGGAACTGCGGAGCTTCCTGACAGCTCTTGTATCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268389.6
ENST00000638543.2
ENST00000639480.2
CDS CCA 72 bp TCATTTGAAGTCACTCTGTTTACAGTGAGGGAAACTTaGTTTTCTTTGAGGGCCTCCCTCACTGTGAACTTG +
Preference number: 6 (lower is better)
Translates to: SFEVTLFTVRET*FSLRASLTVNL
Trigger: CAAGTTCACAGTGAGGGAGGCCCTCAAAGAAAACCAAGTTTCCCTCACTGTAAACAGAGTGACTTCAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268389.6
ENST00000565499.1
ENST00000638543.2
ENST00000639480.2
CDS TCA 72 bp GAATGCTATTCCACAGATGTAAATTGCACTGTCATTTaGAGTCACTCTGTTTACAGTGAGGGAAACTTGGTT +
Preference number: 6 (lower is better)
Translates to: ECYSTDVNCTVI*SHSVYSEGNLV
Trigger: AACCAAGTTTCCCTCACTGTAAACAGAGTGACTTCAAATGACAGTGCAATTTACATCTGTGGAATAGCATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268389.6
ENST00000565499.1
ENST00000638543.2
ENST00000639480.2
CDS CCA 72 bp GCTGATAGTTACTCACCACAAGGTTCCCTTTGGACATaGTACTTTACACTAAATCACTGTAATATACAAAAG +
Preference number: 6 (lower is better)
Translates to: ADSYSPQGSLWT*YFTLNHCNIQK
Trigger: CTTTTGTATATTACAGTGATTTAGTGTAAAGTACCATGTCCAAAGGGAACCTTGTGGTGAGTAACTATCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565499.1
CDS CCA 72 bp GAGAAAGCTGATAGTTACTCACCACAAGGTTCCCTTTaGACATGGTACTTTACACTAAATCACTGTAATATA +
Preference number: 6 (lower is better)
Translates to: EKADSYSPQGSL*TWYFTLNHCNI
Trigger: TATATTACAGTGATTTAGTGTAAAGTACCATGTCCAAAGGGAACCTTGTGGTGAGTAACTATCAGCTTTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565499.1
CDS TCA 72 bp TACTTTACACTAAATCACTGTAATATACAAAAGAGGTaGACATGGTTGGTTAAACATCACCATGTAGGGAGA +
Preference number: 6 (lower is better)
Translates to: YFTLNHCNIQKR*TWLVKHHHVGR
Trigger: TCTCCCTACATGGTGATGTTTAACCAACCATGTTCACCTCTTTTGTATATTACAGTGATTTAGTGTAAAGTA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565499.1