RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGSF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000143061

Ensembl transcript IDs: ENST00000318837.6, ENST00000369483.5, ENST00000369486.8

Found 520 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTATCTGCCGAGCAGCCCAGGCCACCTGCATACCTGCAGACCCTTaGAGGATCAGCACAGACACTGGCCTGGGGAATCCCATGGCCTCC +
Preference number: 1 (lower is better)
Translates to: SICRAAQATCIPADP*RISTDTGLGNPMAS
Trigger: GGAGGCCATGGGATTCCCCAGGCCAGTGTCTGTGCTGATCCTTCAAGGGTCTGCAGGTATGCAGGTGGCCTGGGCTGCTCGGCAGATACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR GCA 90 bp CCCCGTGCCCTCCGTCAGGTGTCTGCCATGGCTGCTTTGGCCCTGTaGTCAGCTCAGGGGCCCACTTCCAAGTTCACTGGACACTTTCTT +
Preference number: 1 (lower is better)
Translates to: PRALRQVSAMAALAL*SAQGPTSKFTGHFL
Trigger: AAGAAAGTGTCCAGTGAACTTGGAAGTGGGCCCCTGAGCTGAGCACAGGGCCAAAGCAGCCATGGCAGACACCTGACGGAGGGCACGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR GCA 90 bp GAATCAGCAAAGTATCTGCCGAGCAGCCCAGGCCACCTGCATACCTaGAGACCCTTGAAGGATCAGCACAGACACTGGCCTGGGGAATCC +
Preference number: 1 (lower is better)
Translates to: ESAKYLPSSPGHLHT*RPLKDQHRHWPGES
Trigger: GGATTCCCCAGGCCAGTGTCTGTGCTGATCCTTCAAGGGTCTGCAGGTATGCAGGTGGCCTGGGCTGCTCGGCAGATACTTTGCTGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR CCA 90 bp TCTGTCAGAAAATGGCTGAGCAATCGCCACCATGCTCCCCTCAGCTaGGAATCAGCAAAGTATCTGCCGAGCAGCCCAGGCCACCTGCAT +
Preference number: 1 (lower is better)
Translates to: SVRKWLSNRHHAPLS*ESAKYLPSSPGHLH
Trigger: ATGCAGGTGGCCTGGGCTGCTCGGCAGATACTTTGCTGATTCCCAGCTGAGGGGAGCATGGTGGCGATTGCTCAGCCATTTTCTGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR TCA 90 bp TTTCCTCCGTCTCAGAAGACTAAAGCTCCAGTAGACAATGCGCAATaGGGTCTCACAGCCACTGGAGGGCACCATTACCATCCATCTGAC +
Preference number: 1 (lower is better)
Translates to: FPPSQKTKAPVDNAQ*GLTATGGHHYHPSD
Trigger: GTCAGATGGATGGTAATGGTGCCCTCCAGTGGCTGTGAGACCTCATTGCGCATTGTCTACTGGAGCTTTAGTCTTCTGAGACGGAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR GCA 90 bp TTCAAGTCTGACAACTTTCCACACACATGCACCCCAGAGTTTGGGTaGTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCC +
Preference number: 1 (lower is better)
Translates to: FKSDNFPHTCTPEFG*CQLSNHRERESLSS
Trigger: GGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCACCCAAACTCTGGGGTGCATGTGTGTGGAAAGTTGTCAGACTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR TCA 90 bp GCAATGAGGTCTCACAGCCACTGGAGGGCACCATTACCATCCATCTaGCATCGCATTTCCATAGAAATGGCCAAAGAAAGAAGGTCCTGG +
Preference number: 1 (lower is better)
Translates to: AMRSHSHWRAPLPSI*HRISIEMAKERRSW
Trigger: CCAGGACCTTCTTTCTTTGGCCATTTCTATGGAAATGCGATGTCAGATGGATGGTAATGGTGCCCTCCAGTGGCTGTGAGACCTCATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR TCA 90 bp CTGAGCCGCTCCTGTACCTCTAATGTGTTGATGCAGCATAATAAATaGGAATCAGCATGTCAGGCAACAGCAGGATTAAGGTGGTGGTGC +
Preference number: 1 (lower is better)
Translates to: LSRSCTSNVLMQHNK*ESACQATAGLRWWC
Trigger: GCACCACCACCTTAATCCTGCTGTTGCCTGACATGCTGATTCTCATTTATTATGCTGCATCAACACATTAGAGGTACAGGAGCGGCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR CCA 90 bp GAAATATTTGCAATTGATGATGCCCTAAGAAGGACAAGCAGCACCTaGCCCAACAGTGTAAAAGAACAGGGTGACACCAGCCATCATGGG +
Preference number: 1 (lower is better)
Translates to: EIFAIDDALRRTSST*PNSVKEQGDTSHHG
Trigger: CCCATGATGGCTGGTGTCACCCTGTTCTTTTACACTGTTGGGCCAGGTGCTGCTTGTCCTTCTTAGGGCATCATCAATTGCAAATATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR CCA 90 bp CATGGCCTCCCCTGCAGTCTGCTCGTTCTCAGAACAGGGCTTCACTaGAATCTTTTATCAGACTTAGTTCCAGAATCCCTGATGACTTTT +
Preference number: 1 (lower is better)
Translates to: HGLPCSLLVLRTGLH*NLLSDLVPESLMTF
Trigger: AAAAGTCATCAGGGATTCTGGAACTAAGTCTGATAAAAGATTCCAGTGAAGCCCTGTTCTGAGAACGAGCAGACTGCAGGGGAGGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR TCA 90 bp AGAGATCAAGAAAGGGAAAGGAAAAATCCCACAGACAATGCCTTGTaGTCACAGTCTGCTGAGACTAGGCAAACAGAAAGGATGACAAAG +
Preference number: 1 (lower is better)
Translates to: RDQERERKNPTDNAL*SQSAETRQTERMTK
Trigger: CTTTGTCATCCTTTCTGTTTGCCTAGTCTCAGCAGACTGTGATCACAAGGCATTGTCTGTGGGATTTTTCCTTTCCCTTTCTTGATCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR TCA 90 bp TTATCAGACTTAGTTCCAGAATCCCTGATGACTTTTTCCAAACTGTaGCCCCCTCTTGGGATTCAGGATGTAAGTTCCCAGAGTAAAGGA +
Preference number: 1 (lower is better)
Translates to: LSDLVPESLMTFSKL*PPLGIQDVSSQSKG
Trigger: TCCTTTACTCTGGGAACTTACATCCTGAATCCCAAGAGGGGGTCACAGTTTGGAAAAAGTCATCAGGGATTCTGGAACTAAGTCTGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR TCA 90 bp CCTAATGGGGTTATGCAGGATTTCTCTTGTACATACACAGTTCTTTaGAGCAAAATTCAGTGCTTTCGTCTTGACTACAAAGTGGTTCCA +
Preference number: 1 (lower is better)
Translates to: PNGVMQDFSCTYTVL*SKIQCFRLDYKVVP
Trigger: TGGAACCACTTTGTAGTCAAGACGAAAGCACTGAATTTTGCTTCAAAGAACTGTGTATGTACAAGAGAAATCCTGCATAACCCCATTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR CAA 90 bp AAGTATCTGCCGAGCAGCCCAGGCCACCTGCATACCTGCAGACCCTaGAAGGATCAGCACAGACACTGGCCTGGGGAATCCCATGGCCTC +
Preference number: 2 (lower is better)
Translates to: KYLPSSPGHLHTCRP*KDQHRHWPGESHGL
Trigger: GAGGCCATGGGATTCCCCAGGCCAGTGTCTGTGCTGATCCTTCAAGGGTCTGCAGGTATGCAGGTGGCCTGGGCTGCTCGGCAGATACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR GCA 90 bp GCTGAGACTAGGCAAACAGAAAGGATGACAAAGGGCTGCGTCTGGACTGCCCCCCCTCCGTCAGGTGTCTaGCATGGCTGCTTTGGCCCT +
Preference number: 2 (lower is better)
Translates to: AETRQTERMTKGCVWTAPPPSGV*HGCFGP
Trigger: AGGGCCAAAGCAGCCATGGCAGACACCTGACGGAGG...GGGGGCAGTCCAGACGCAGCCCTTTGTCATCCTTTCTGTTTGCCTAGTCTCAGC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR GCA 90 bp AAAGTATCTGCCGAGCAGCCCAGGCCACCTGCATACCTGCAGACCCTTGAAGGAAGGATGACAAAGGGCTaGGTCTGGACTGCCCCCAGG +
Preference number: 2 (lower is better)
Translates to: KVSAEQPRPPAYLQTLEGRMTKG*VWTAPR
Trigger: CCTGGGGGCAGTCCAGACGCAGCCCTTTGTCATCCT...TCCTTCAAGGGTCTGCAGGTATGCAGGTGGCCTGGGCTGCTCGGCAGATACTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR TCA 90 bp CTCCAGGGAGGTAGATATTTCTCTGCACTCTCCAACACCAGGCCCTGGAAACCCGGCAGTCTGTCTCTGTaGCTGACTGGGAACTTGGAA +
Preference number: 2 (lower is better)
Translates to: LQGGRYFSALSNTRPWKPGSLSL*LTGNLE
Trigger: TTCCAAGTTCCCAGTCAGTCACAGAGACAGACTGCC...GGGTTTCCAGGGCCTGGTGTTGGAGAGTGCAGAGAAATATCTACCTCCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR CCA 90 bp AGGAAACGCCAGTCATCTTCCCTCATTGACTCAGCCTATAAAGTAGGAGTCAGCGCACAGACACTGGCCTaGGGAATCCCATGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: RKRQSSSLIDSAYKVGVSAQTLA*GIPWPP
Trigger: GGGAGGCCATGGGATTCCCCAGGCCAGTGTCTGTGC...GCTGACTCCTACTTTATAGGCTGAGTCAATGAGGGAAGATGACTGGCGTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR TCA 90 bp AAAGTATCTGCCGAGCAGCCCAGGCCACCTGCATACCTGCAGACCCTTGAAGGAACTTTTTCCAAACTGTaGCCCCCTCTTGGGATTCAG +
Preference number: 2 (lower is better)
Translates to: KVSAEQPRPPAYLQTLEGTFSKL*PPLGIQ
Trigger: CTGAATCCCAAGAGGGGGTCACAGTTTGGAAAAAGT...TCCTTCAAGGGTCTGCAGGTATGCAGGTGGCCTGGGCTGCTCGGCAGATACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR GCA 90 bp AAAGTATCTGCCGAGCAGCCCAGGCCACCTGCATACCTGCAGACCCTTGAAGGAAATTTGGAAAGTGTGTaGCGTTTGGGGCTTCTGACC +
Preference number: 2 (lower is better)
Translates to: KVSAEQPRPPAYLQTLEGNLESV*RLGLLT
Trigger: GGTCAGAAGCCCCAAACGGCACACACTTTCCAAATT...TCCTTCAAGGGTCTGCAGGTATGCAGGTGGCCTGGGCTGCTCGGCAGATACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR CCA 90 bp TCAGGCAACAGCAGGATTAAGGTGGTGGTGCCTGCACACACTGTCTCACAGGAGATGCACCCCAGAGTTTaGGTGCTGTCAACTGTCCAA +
Preference number: 2 (lower is better)
Translates to: SGNSRIKVVVPAHTVSQEMHPRV*VLSTVQ
Trigger: TTGGACAGTTGACAGCACCCAAACTCTGGGGTGCAT...CTCCTGTGAGACAGTGTGTGCAGGCACCACCACCTTAATCCTGCTGTTGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR CCA 90 bp AAAGTATCTGCCGAGCAGCCCAGGCCACCTGCATACCTGCAGACCCTTGAAGGAAGTAGATGTGGCACCTaGAGCTACTCACTACATTAC +
Preference number: 2 (lower is better)
Translates to: KVSAEQPRPPAYLQTLEGSRCGT*SYSLHY
Trigger: GTAATGTAGTGAGTAGCTCCAGGTGCCACATCTACT...TCCTTCAAGGGTCTGCAGGTATGCAGGTGGCCTGGGCTGCTCGGCAGATACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR CCA 90 bp AAAGTATCTGCCGAGCAGCCCAGGCCACCTGCATACCTGCAGACCCTTGAAGGACTGCCCACTTTAATTTaGAAAGTGTGTGCCGTTTGG +
Preference number: 2 (lower is better)
Translates to: KVSAEQPRPPAYLQTLEGLPTLI*KVCAVW
Trigger: CCAAACGGCACACACTTTCCAAATTAAAGTGGGCAG...TCCTTCAAGGGTCTGCAGGTATGCAGGTGGCCTGGGCTGCTCGGCAGATACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR TCA 90 bp GATGATGCCCTAAGAAGGACAAGCAGCACCTGGCCCAACAGTGTAAAAGAACAGGGCAAACAGAAAGGATaGCAAAGGGCTGCGTCTGGA +
Preference number: 2 (lower is better)
Translates to: DDALRRTSSTWPNSVKEQGKQKG*QRAASG
Trigger: TCCAGACGCAGCCCTTTGTCATCCTTTCTGTTTGCC...CTGTTCTTTTACACTGTTGGGCCAGGTGCTGCTTGTCCTTCTTAGGGCATCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR CCA 90 bp GATCACAACATTTGCGCGCAAATAGCTAACCAACCAAGACTGCCACCGAGAGGCATGCACCCCAGAGTTTaGGTGCTGTCAACTGTCCAA +
Preference number: 2 (lower is better)
Translates to: DHNICAQIANQPRLPPRGMHPRV*VLSTVQ
Trigger: TTGGACAGTTGACAGCACCCAAACTCTGGGGTGCAT...GCCTCTCGGTGGCAGTCTTGGTTGGTTAGCTATTTGCGCGCAAATGTTGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR GCA 90 bp ATTTGTGTGCAGCACCTACTTCTTTATCGCCGTGAACTGAAATCTAAGATTTCATGTCAGCCAGCCCCGTaGCCTCCGTCAGGTGTCTGC +
Preference number: 2 (lower is better)
Translates to: ICVQHLLLYRRELKSKISCQPAP*PPSGVC
Trigger: GCAGACACCTGACGGAGGGCACGGGGCTGGCTGACA...TGAAATCTTAGATTTCAGTTCACGGCGATAAAGAAGTAGGTGCTGCACACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR CCA 90 bp GAAGAAAAACCTAGTCTTCACACCTCCAGGGAGGTAGATATTTCTCTGCACTCTGTCAGGTGTCTGCCATaGCTGCTTTGGCCCTGTGCT +
Preference number: 2 (lower is better)
Translates to: EEKPSLHTSREVDISLHSVRCLP*LLWPCA
Trigger: AGCACAGGGCCAAAGCAGCCATGGCAGACACCTGAC...AGAGTGCAGAGAAATATCTACCTCCCTGGAGGTGTGAAGACTAGGTTTTTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR CAA 90 bp CACTTTTCAAGTCTGACAACTTTCCACACACATGCACCCCAGAGTTaGGGTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCA +
Preference number: 2 (lower is better)
Translates to: HFSSLTTFHTHAPQS*GAVNCPITEKGRAS
Trigger: TGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCACCCAAACTCTGGGGTGCATGTGTGTGGAAAGTTGTCAGACTTGAAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR CAA 90 bp TCAGGGGCCCACTTCCAAGTTCACTGGACACTTTCTTTTAAGAGTTaGGCAAAGCACCTGAAGACACAGGCCCACCTGCTCACAGTTAAT +
Preference number: 2 (lower is better)
Translates to: SGAHFQVHWTLSFKS*AKHLKTQAHLLTVN
Trigger: ATTAACTGTGAGCAGGTGGGCCTGTGTCTTCAGGTGCTTTGCCAAACTCTTAAAAGAAAGTGTCCAGTGAACTTGGAAGTGGGCCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR CCA 90 bp GCTGAGACTAGGCAAACAGAAAGGATGACAAAGGGCTGCGTCTGGACTGCCCCCGCAAAAACAAAGTCTTaGAAGAGATTCCTTGTCACT +
Preference number: 2 (lower is better)
Translates to: AETRQTERMTKGCVWTAPAKTKS*KRFLVT
Trigger: AGTGACAAGGAATCTCTTCCAAGACTTTGTTTTTGC...GGGGGCAGTCCAGACGCAGCCCTTTGTCATCCTTTCTGTTTGCCTAGTCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR TCA 90 bp GGGCCCACTTCCAAGTTCACTGGACACTTTCTTTTAAGAGTTTGGCAAAGCACCTCTAGTCACTGGCTTTaGCAAATCTGCAGGTCAGCA +
Preference number: 2 (lower is better)
Translates to: GPTSKFTGHFLLRVWQSTSSHWL*QICRSA
Trigger: TGCTGACCTGCAGATTTGTCAAAGCCAGTGACTAGA...GGTGCTTTGCCAAACTCTTAAAAGAAAGTGTCCAGTGAACTTGGAAGTGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR TCA 90 bp AGGAAACGCCAGTCATCTTCCCTCATTGACTCAGCCTATAAAGTAGGAGTCAGCACTTTTTCCAAACTGTaGCCCCCTCTTGGGATTCAG +
Preference number: 2 (lower is better)
Translates to: RKRQSSSLIDSAYKVGVSTFSKL*PPLGIQ
Trigger: CTGAATCCCAAGAGGGGGTCACAGTTTGGAAAAAGT...GCTGACTCCTACTTTATAGGCTGAGTCAATGAGGGAAGATGACTGGCGTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR TCA 90 bp AGGAAACGCCAGTCATCTTCCCTCATTGACTCAGCCTATAAAGTAGGAGTCAGCCGTTTGGGTATATTTTaGTCCATGGGTGGCATTTTC +
Preference number: 2 (lower is better)
Translates to: RKRQSSSLIDSAYKVGVSRLGIF*SMGGIF
Trigger: GAAAATGCCACCCATGGATCAAAATATACCCAAACG...GCTGACTCCTACTTTATAGGCTGAGTCAATGAGGGAAGATGACTGGCGTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR TCA 90 bp AGGAAACGCCAGTCATCTTCCCTCATTGACTCAGCCTATAAAGTAGGAGTCAGCAACACTTTTCAAGTCTaGCAACTTTCCACACACATG +
Preference number: 2 (lower is better)
Translates to: RKRQSSSLIDSAYKVGVSNTFQV*QLSTHM
Trigger: CATGTGTGTGGAAAGTTGTCAGACTTGAAAAGTGTT...GCTGACTCCTACTTTATAGGCTGAGTCAATGAGGGAAGATGACTGGCGTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR TCA 90 bp ATTTGTGTGCAGCACCTACTTCTTTATCGCCGTGAACTGAAATCTAAGATTTCAATACCTGCAGACCCTTaGAGGATCAGCACAGACACT +
Preference number: 2 (lower is better)
Translates to: ICVQHLLLYRRELKSKISIPADP*RISTDT
Trigger: AGTGTCTGTGCTGATCCTTCAAGGGTCTGCAGGTAT...TGAAATCTTAGATTTCAGTTCACGGCGATAAAGAAGTAGGTGCTGCACACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR CCA 90 bp AGGAAACGCCAGTCATCTTCCCTCATTGACTCAGCCTATAAAGTAGGAGTCAGCGCAAAAACAAAGTCTTaGAAGAGATTCCTTGTCACT +
Preference number: 2 (lower is better)
Translates to: RKRQSSSLIDSAYKVGVSAKTKS*KRFLVT
Trigger: AGTGACAAGGAATCTCTTCCAAGACTTTGTTTTTGC...GCTGACTCCTACTTTATAGGCTGAGTCAATGAGGGAAGATGACTGGCGTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR CCA 90 bp AGGAAACGCCAGTCATCTTCCCTCATTGACTCAGCCTATAAAGTAGGAGTCAGCCACTTCCAAGTTCACTaGACACTTTCTTTTAAGAGT +
Preference number: 2 (lower is better)
Translates to: RKRQSSSLIDSAYKVGVSHFQVH*TLSFKS
Trigger: ACTCTTAAAAGAAAGTGTCCAGTGAACTTGGAAGTG...GCTGACTCCTACTTTATAGGCTGAGTCAATGAGGGAAGATGACTGGCGTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR TCA 90 bp TCGCATTTCCATAGAAATGGCCAAAGAAAGAAGGTCCTGGGGTTTTTCATAGAAAAAAAGTTCAACCTTTaGTGCTATCCCCCAGCCCAA +
Preference number: 2 (lower is better)
Translates to: SHFHRNGQRKKVLGFFIEKKFNL*CYPPAQ
Trigger: TTGGGCTGGGGGATAGCATCAAAGGTTGAACTTTTT...TTCTATGAAAAACCCCAGGACCTTCTTTCTTTGGCCATTTCTATGGAAATGCGA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR CAA 90 bp AGTCTTGGAAGAGATTCCTTGTCACTAGAAAGTTCGCCCTTCCTTTaGCTGTCAGTTGTACGTAAGAGAAATTCGTCCACATTAAGGAAT +
Preference number: 2 (lower is better)
Translates to: SLGRDSLSLESSPFL*LSVVRKRNSSTLRN
Trigger: ATTCCTTAATGTGGACGAATTTCTCTTACGTACAACTGACAGCAAAAGGAAGGGCGAACTTTCTAGTGACAAGGAATCTCTTCCAAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR CCA 90 bp ATTTGTGTGCAGCACCTACTTCTTTATCGCCGTGAACTGAAATCTAAGATTTCAGTATATTTTGATCCATaGGTGGCATTTTCAAATGTG +
Preference number: 2 (lower is better)
Translates to: ICVQHLLLYRRELKSKISVYFDP*VAFSNV
Trigger: CACATTTGAAAATGCCACCCATGGATCAAAATATAC...TGAAATCTTAGATTTCAGTTCACGGCGATAAAGAAGTAGGTGCTGCACACAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR CCA 72 bp TCAGCCAGCCCCGTGCCCTCCGTCAGGTGTCTGCCATaGCTGCTTTGGCCCTGTGCTCAGCTCAGGGGCCCA +
Preference number: 3 (lower is better)
Translates to: SASPVPSVRCLP*LLWPCAQLRGP
Trigger: TGGGCCCCTGAGCTGAGCACAGGGCCAAAGCAGCCATGGCAGACACCTGACGGAGGGCACGGGGCTGGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR TCA 72 bp CGAGCAGCCCAGGCCACCTGCATACCTGCAGACCCTTaGAGGATCAGCACAGACACTGGCCTGGGGAATCCC +
Preference number: 3 (lower is better)
Translates to: RAAQATCIPADP*RISTDTGLGNP
Trigger: GGGATTCCCCAGGCCAGTGTCTGTGCTGATCCTTCAAGGGTCTGCAGGTATGCAGGTGGCCTGGGCTGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR GCA 72 bp CTCCGTCAGGTGTCTGCCATGGCTGCTTTGGCCCTGTaGTCAGCTCAGGGGCCCACTTCCAAGTTCACTGGA +
Preference number: 3 (lower is better)
Translates to: LRQVSAMAALAL*SAQGPTSKFTG
Trigger: TCCAGTGAACTTGGAAGTGGGCCCCTGAGCTGAGCACAGGGCCAAAGCAGCCATGGCAGACACCTGACGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR CAA 90 bp GCTGAGACTAGGCAAACAGAAAGGATGACAAAGGGCTGCGTCTGGACTGCCCCCGAAAGTGTGTGCCGTTaGGGGCTTCTGACCCATTCT +
Preference number: 3 (lower is better)
Translates to: AETRQTERMTKGCVWTAPESVCR*GLLTHS
Trigger: AGAATGGGTCAGAAGCCCCAAACGGCACACACTTTC...GGGGGCAGTCCAGACGCAGCCCTTTGTCATCCTTTCTGTTTGCCTAGTCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR CCA 72 bp GAATCAGCATGTCAGGCAACAGCAGGATTAAGGTGGTaGTGCCTGCACACACTGTCTCACAGGAGGGTACGG +
Preference number: 3 (lower is better)
Translates to: ESACQATAGLRW*CLHTLSHRRVR
Trigger: CCGTACCCTCCTGTGAGACAGTGTGTGCAGGCACCACCACCTTAATCCTGCTGTTGCCTGACATGCTGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR GCA 72 bp GCAAACAGAAAGGATGACAAAGGGCTGCGTCTGGACTaGCCCCAGGCTGATATTCTTATGGCAGTGAGAGGC +
Preference number: 3 (lower is better)
Translates to: ANRKDDKGLRLD*PQADILMAVRG
Trigger: GCCTCTCACTGCCATAAGAATATCAGCCTGGGGGCAGTCCAGACGCAGCCCTTTGTCATCCTTTCTGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR GCA 72 bp TCAGCATGTCAGGCAACAGCAGGATTAAGGTGGTGGTaGCTGCACACACTGTCTCACAGGAGGGTACGGTAT +
Preference number: 3 (lower is better)
Translates to: SACQATAGLRWW*LHTLSHRRVRY
Trigger: ATACCGTACCCTCCTGTGAGACAGTGTGTGCAGGCACCACCACCTTAATCCTGCTGTTGCCTGACATGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR CAA 90 bp AAAGTATCTGCCGAGCAGCCCAGGCCACCTGCATACCTGCAGACCCTTGAAGGACCTGCCCACTTTAATTaGGAAAGTGTGTGCCGTTTG +
Preference number: 3 (lower is better)
Translates to: KVSAEQPRPPAYLQTLEGPAHFN*ESVCRL
Trigger: CAAACGGCACACACTTTCCAAATTAAAGTGGGCAGG...TCCTTCAAGGGTCTGCAGGTATGCAGGTGGCCTGGGCTGCTCGGCAGATACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR GCA 72 bp GCTGAGACTAGGCAAACAGAAAGGATGACAAAGGGCTaGGTCTGGACTGCCCCCAGGCTGATATTCTTATGG +
Preference number: 3 (lower is better)
Translates to: AETRQTERMTKG*VWTAPRLIFLW
Trigger: CCATAAGAATATCAGCCTGGGGGCAGTCCAGACGCAGCCCTTTGTCATCCTTTCTGTTTGCCTAGTCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR GCA 72 bp TGTGTCTGTCAGAAAATGGCTGAGCAATCGCCACCATaGTCCCCTCAGCTGGGAATCAGCAAAGTATCTGCC +
Preference number: 3 (lower is better)
Translates to: CVCQKMAEQSPP*SPQLGISKVSA
Trigger: GGCAGATACTTTGCTGATTCCCAGCTGAGGGGAGCATGGTGGCGATTGCTCAGCCATTTTCTGACAGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR CAA 90 bp AGGAAACGCCAGTCATCTTCCCTCATTGACTCAGCCTATAAAGTAGGAGTCAGCGAGGGTACGGTATACTaGGGGGAGAAAAGGCAGGTC +
Preference number: 3 (lower is better)
Translates to: RKRQSSSLIDSAYKVGVSEGTVY*GEKRQV
Trigger: GACCTGCCTTTTCTCCCCCAAGTATACCGTACCCTC...GCTGACTCCTACTTTATAGGCTGAGTCAATGAGGGAAGATGACTGGCGTTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR GCA 72 bp GACAACTTTCCACACACATGCACCCCAGAGTTTGGGTaGTGTCAACTGTCCAATCACAGAGAAAGGGAGAGC +
Preference number: 3 (lower is better)
Translates to: DNFPHTCTPEFG*CQLSNHRERES
Trigger: GCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCACCCAAACTCTGGGGTGCATGTGTGTGGAAAGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR GCA 72 bp AAAGCAGCCCCTGCCCACTTTAATTTGGAAAGTGTGTaGCGTTTGGGGCTTCTGACCCATTCTCCAAGACAG +
Preference number: 3 (lower is better)
Translates to: KAAPAHFNLESV*RLGLLTHSPRQ
Trigger: CTGTCTTGGAGAATGGGTCAGAAGCCCCAAACGGCACACACTTTCCAAATTAAAGTGGGCAGGGGCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR CCA 72 bp GCAATTGATGATGCCCTAAGAAGGACAAGCAGCACCTaGCCCAACAGTGTAAAAGAACAGGGTGACACCAGC +
Preference number: 3 (lower is better)
Translates to: AIDDALRRTSST*PNSVKEQGDTS
Trigger: GCTGGTGTCACCCTGTTCTTTTACACTGTTGGGCCAGGTGCTGCTTGTCCTTCTTAGGGCATCATCAATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR CAA 90 bp GCTGAGACTAGGCAAACAGAAAGGATGACAAAGGGCTGCGTCTGGACTGCCCCCTGCAAAAACAAAGTCTaGGAAGAGATTCCTTGTCAC +
Preference number: 3 (lower is better)
Translates to: AETRQTERMTKGCVWTAPCKNKV*EEIPCH
Trigger: GTGACAAGGAATCTCTTCCAAGACTTTGTTTTTGCA...GGGGGCAGTCCAGACGCAGCCCTTTGTCATCCTTTCTGTTTGCCTAGTCTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR TCA 72 bp TCTCAGAAGACTAAAGCTCCAGTAGACAATGCGCAATaGGGTCTCACAGCCACTGGAGGGCACCATTACCAT +
Preference number: 3 (lower is better)
Translates to: SQKTKAPVDNAQ*GLTATGGHHYH
Trigger: ATGGTAATGGTGCCCTCCAGTGGCTGTGAGACCTCATTGCGCATTGTCTACTGGAGCTTTAGTCTTCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR CCA 72 bp CCCTGCAGTCTGCTCGTTCTCAGAACAGGGCTTCACTaGAATCTTTTATCAGACTTAGTTCCAGAATCCCTG +
Preference number: 3 (lower is better)
Translates to: PCSLLVLRTGLH*NLLSDLVPESL
Trigger: CAGGGATTCTGGAACTAAGTCTGATAAAAGATTCCAGTGAAGCCCTGTTCTGAGAACGAGCAGACTGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR CAA 90 bp CTCCAGGGAGGTAGATATTTCTCTGCACTCTCCAACACCAGGCCCTGGAAACCCTATGCAGGATTTCTCTaGTACATACACAGTTCTTTG +
Preference number: 3 (lower is better)
Translates to: LQGGRYFSALSNTRPWKPYAGFL*YIHSSL
Trigger: CAAAGAACTGTGTATGTACAAGAGAAATCCTGCATA...GGGTTTCCAGGGCCTGGTGTTGGAGAGTGCAGAGAAATATCTACCTCCCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR CAA 90 bp AGGAAACGCCAGTCATCTTCCCTCATTGACTCAGCCTATAAAGTAGGAGTCAGCAAGGAGATGGCATGCTaGGCCAGAAAAATATGGGAA +
Preference number: 3 (lower is better)
Translates to: RKRQSSSLIDSAYKVGVSKEMAC*ARKIWE
Trigger: TTCCCATATTTTTCTGGCCAAGCATGCCATCTCCTT...GCTGACTCCTACTTTATAGGCTGAGTCAATGAGGGAAGATGACTGGCGTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR TCA 72 bp TCTCACAGCCACTGGAGGGCACCATTACCATCCATCTaGCATCGCATTTCCATAGAAATGGCCAAAGAAAGA +
Preference number: 3 (lower is better)
Translates to: SHSHWRAPLPSI*HRISIEMAKER
Trigger: TCTTTCTTTGGCCATTTCTATGGAAATGCGATGTCAGATGGATGGTAATGGTGCCCTCCAGTGGCTGTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR TCA 72 bp ACTGGACACTTTCTTTTAAGAGTTTGGCAAAGCACCTaGAGACACAGGCCCACCTGCTCACAGTTAATCAGT +
Preference number: 3 (lower is better)
Translates to: TGHFLLRVWQST*RHRPTCSQLIS
Trigger: ACTGATTAACTGTGAGCAGGTGGGCCTGTGTCTTCAGGTGCTTTGCCAAACTCTTAAAAGAAAGTGTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR TCA 72 bp TTAGTTCCAGAATCCCTGATGACTTTTTCCAAACTGTaGCCCCCTCTTGGGATTCAGGATGTAAGTTCCCAG +
Preference number: 3 (lower is better)
Translates to: LVPESLMTFSKL*PPLGIQDVSSQ
Trigger: CTGGGAACTTACATCCTGAATCCCAAGAGGGGGTCACAGTTTGGAAAAAGTCATCAGGGATTCTGGAACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR-3UTR CAA 90 bp TCGCATTTCCATAGAAATGGCCAAAGAAAGAAGGTCCTGGGGTTTTTCATAGAAAGTTCGCCCTTCCTTTaGCTGTCAGTTGTACGTAAG +
Preference number: 3 (lower is better)
Translates to: SHFHRNGQRKKVLGFFIESSPFL*LSVVRK
Trigger: CTTACGTACAACTGACAGCAAAAGGAAGGGCGAACT...TTCTATGAAAAACCCCAGGACCTTCTTTCTTTGGCCATTTCTATGGAAATGCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR TCA 72 bp TCCTGTACCTCTAATGTGTTGATGCAGCATAATAAATaGGAATCAGCATGTCAGGCAACAGCAGGATTAAGG +
Preference number: 3 (lower is better)
Translates to: SCTSNVLMQHNK*ESACQATAGLR
Trigger: CCTTAATCCTGCTGTTGCCTGACATGCTGATTCTCATTTATTATGCTGCATCAACACATTAGAGGTACAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCGCCCCCTGGATGGATACTaGGAACAGGGGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: ERESLSSSVANIRWGITRPLDGY*EQGAPG
Trigger: GCCTGGAGCCCCCTGTTCTCAGTATCCATCCAGGGG...GCGGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp AGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCTTGCCTGCAGCACTGTaGGCCGGTAGAGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: RERESLSSSVANIRWGITLPAAL*AGRAPG
Trigger: CCCCGGTGCTCTACCGGCTCACAGTGCTGCAGGCAA...GGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCGCTGCCCTCCCAAGGACTaGCCTCTGGGCCAAAGACAG +
Preference number: 4 (lower is better)
Translates to: ERESLSSSVANIRWGITRCPPKD*PLGQRQ
Trigger: CTGTCTTTGGCCCAGAGGGCAGTCCTTGGGAGGGCA...GCGGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp ATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATTGCCTGCAGCACTGTaGGCCGGTAGAGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: ITEKGRASAPPWPTSAGALPAAL*AGRAPG
Trigger: CCCCGGTGCTCTACCGGCTCACAGTGCTGCAGGCAA...TGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGATGCCGATGGGGGCTaGCTCCTCCTCCGTCAGCCG +
Preference number: 4 (lower is better)
Translates to: VQSQRKGEPQLLRGQHPLDADGG*LLLRQP
Trigger: CGGCTGACGGAGGAGGAGTCAGCCCCCATCGGCATC...CAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp CAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCCCTGGATGGATACTaGGAACAGGGGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: QRKGEPQLLRGQHPLGHHPLDGY*EQGAPG
Trigger: GCCTGGAGCCCCCTGTTCTCAGTATCCATCCAGGGG...GTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp AGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCCCGCTTATACCACATaGCACTGGGGCTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RERESLSSSVANIRWGITPAYTT*HWGWAA
Trigger: GGCTGCCCAGCCCCAGTGGCATGTGGTATAAGCGGG...GGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCCGCTTATACCACATaGCACTGGGGCTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QRKGEPQLLRGQHPLGHHPAYTT*HWGWAA
Trigger: GGCTGCCCAGCCCCAGTGGCATGTGGTATAAGCGGG...GTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCGCGTCCAGCTGGAAAGCTaGCTTCTCAGAGACCGTGGC +
Preference number: 4 (lower is better)
Translates to: ERESLSSSVANIRWGITRVQLES*LLRDRG
Trigger: GCCACGGTCTCTGAGAAGGCAGCTTTCCAGCTGGAC...GCGGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCCACCTGCCCCACGCCTaGCTAGGGCACACGAAGCAA +
Preference number: 4 (lower is better)
Translates to: HRERESLSSSVANIRWGIHLPHA*LGHTKQ
Trigger: TTGCTTCGTGTGCCCTAGGCAGGCGTGGGGCAGGTG...GATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGAGGTTCCCCTGGGCTTaGCTGAGCCTCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: PITEKGRASAPPWPTSAGRFPWA*LSLRRL
Trigger: CAGCCGCCTGAGGCTCAGCCAAGCCCAGGGGAACCT...CCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCGCGCACACGAAGCAAGTTaGCGTTCGGCAGCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: ERESLSSSVANIRWGITRAHEAS*RSAALK
Trigger: CTTCAGGGCTGCCGAACGCCAACTTGCTTCGTGTGC...GCGGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp CAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGGCAGGTGGAAGATGGTaGGGCGGAAGGTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QSQRKGEPQLLRGQHPLGAGGRW*GGRWSS
Trigger: GGAGGACCACCTTCCGCCTCACCATCTTCCACCTGC...CCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp AATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCCGGTACCATTCCTTCTaGGGGCTGGGCAGCCACTCC +
Preference number: 4 (lower is better)
Translates to: NHRERESLSSSVANIRWGRYHSF*GLGSHS
Trigger: GGAGTGGCTGCCCAGCCCTCAGAAGGAATGGTACCG...GCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp TCAGGCAACAGCAGGATTAAGGTGGTGGTGCCTGCACACACTGTCTCACAGGAGGGCGTTCGGCAGCCCTaGAGCGGTACCCCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: SGNSRIKVVVPAHTVSQEGVRQP*SGTPAR
Trigger: TCGCGCTGGGGTACCGCTTCAGGGCTGCCGAACGCC...CTCCTGTGAGACAGTGTGTGCAGGCACCACCACCTTAATCCTGCTGTTGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACTGTCAGAGCTGTCTaGCCAGCGGTGTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: HRERESLSSSVANIRWGITVRAV*PAVSSA
Trigger: GGCAGAGGACACCGCTGGGCAGACAGCTCTGACAGT...GATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGCACCTGCCCCACGCCTaGCTAGGGCACACGAAGCAA +
Preference number: 4 (lower is better)
Translates to: PITEKGRASAPPWPTSAGHLPHA*LGHTKQ
Trigger: TTGCTTCGTGTGCCCTAGGCAGGCGTGGGGCAGGTG...CCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCGCTGGGACAGGAGCTGGTaGTGCTGGGGGACTTTAACT +
Preference number: 4 (lower is better)
Translates to: ERESLSSSVANIRWGITRWDRSW*CWGTLT
Trigger: AGTTAAAGTCCCCCAGCACCACCAGCTCCTGTCCCA...GCGGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318837.6
ENST00000369483.5
CDS-3UTR CCA 90 bp GAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCGCGTCTCCCGCTCAGGGTaGTTGGGCTTCCATACAAAC +
Preference number: 4 (lower is better)
Translates to: ERESLSSSVANIRWGITRVSRSG*LGFHTN
Trigger: GTTTGTATGGAAGCCCAACCACCCTGAGCGGGAGAC...GCGGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGAGCGGGAGTCCTGGCTaGAGCGGGACACGATGCTAC +
Preference number: 4 (lower is better)
Translates to: PITEKGRASAPPWPTSAGSGSPG*SGTRCY
Trigger: GTAGCATCGTGTCCCGCTCCAGCCAGGACTCCCGCT...CCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCGCATTCCTTCTGAGGGCTaGGCAGCCACTCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: ERESLSSSVANIRWGITRIPSEG*AATPPH
Trigger: ATGTGGAGGAGTGGCTGCCCAGCCCTCAGAAGGAAT...GCGGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTCAGATTTCTCGCCCCTaGCCCTCTCCCTCCGCGCGC +
Preference number: 4 (lower is better)
Translates to: CPITEKGRASAPPWPTSAQISRP*PSPSAR
Trigger: GCGCGCGGAGGGAGAGGGCCAGGGGCGAGAAATCTG...AGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GGGTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGCAGATTTCTCGCCCCTaGCCCTCTCCCTCCGCGCGC +
Preference number: 4 (lower is better)
Translates to: GCCQLSNHRERESLSSSVQISRP*PSPSAR
Trigger: GCGCGCGGAGGGAGAGGGCCAGGGGCGAGAAATCTG...CACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCTTGCCTGCAGCACTGTaGGCCGGTAGAGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: VLSTVQSQRKGEPQLLRGLPAAL*AGRAPG
Trigger: CCCCGGTGCTCTACCGGCTCACAGTGCTGCAGGCAA...GCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp CAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCGTCGTTGGAGCAGATaGTGGACTGGAGGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: QSQRKGEPQLLRGQHPLGRRWSR*WTGGWD
Trigger: GTCCCACCCTCCAGTCCATCATCTGCTCCAACGACG...CCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp ATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCACGTCGTTGGAGCAGATaGTGGACTGGAGGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: ITEKGRASAPPWPTSAGARRWSR*WTGGWD
Trigger: GTCCCACCCTCCAGTCCATCATCTGCTCCAACGACG...TGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp TCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATGGCGTTCGGCAGCCCTaGAGCGGTACCCCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: STVQSQRKGEPQLLRGQHGVRQP*SGTPAR
Trigger: TCGCGCTGGGGTACCGCTTCAGGGCTGCCGAACGCC...ATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp CAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACGTTTGGCAAAGCACCTaGAGACACAGGCCCACCTGC +
Preference number: 4 (lower is better)
Translates to: QRKGEPQLLRGQHPLGHHVWQST*RHRPTC
Trigger: GCAGGTGGGCCTGTGTCTTCAGGTGCTTTGCCAAAC...GTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCGCCTGTCAGAAAATGGCTaGGCAATCGCCACCATGCTC +
Preference number: 4 (lower is better)
Translates to: ERESLSSSVANIRWGITRLSENG*AIATML
Trigger: GAGCATGGTGGCGATTGCTCAGCCATTTTCTGACAG...GCGGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp AGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCGGACAGGAGCTGGTGGTaGTGGGGGACTTTAACTACC +
Preference number: 4 (lower is better)
Translates to: RKGEPQLLRGQHPLGHHPDRSWW*WGTLTT
Trigger: GGTAGTTAAAGTCCCCCAGCACCACCAGCTCCTGTC...CGGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318837.6
ENST00000369483.5
CDS-3UTR GCA 90 bp CAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCACTCCAGCTGTACCTaGCGGGTCTCCAGAACCGAC +
Preference number: 4 (lower is better)
Translates to: QSQRKGEPQLLRGQHPLGHSSCT*RVSRTD
Trigger: GTCGGTTCTGGAGACCCGGCAGGTACAGCTGGAGTG...CCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp ATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCAACTGTCAGAGCTGTCTaGCCAGCGGTGTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ITEKGRASAPPWPTSAGATVRAV*PAVSSA
Trigger: GGCAGAGGACACCGCTGGGCAGACAGCTCTGACAGT...TGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp ACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCATGCCCTCCCAAGGACTaGCCTCTGGGCCAAAGACAG +
Preference number: 4 (lower is better)
Translates to: TEKGRASAPPWPTSAGASCPPKD*PLGQRQ
Trigger: CTGTCTTTGGCCCAGAGGGCAGTCCTTGGGAGGGCA...TGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCTGTATCTTGGGGGCTTaGCTGCAGCACTGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: HRERESLSSSVANIRWGICILGA*LQHCEP
Trigger: CGGCTCACAGTGCTGCAGGCAAGCCCCCAAGATACA...GATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCGTCGCTCCCGGCTCCTaGCACATCGTGTGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: LSNHRERESLSSSVANIRVAPGS*HIVCLA
Trigger: TGCAAGGCACACGATGTGGCAGGAGCCGGGAGCGAC...GCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp TCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGCTGCTTTGGCCCTGTaGTCAGCTCAGGGGCCCACT +
Preference number: 4 (lower is better)
Translates to: SNHRERESLSSSVANIRWAALAL*SAQGPT
Trigger: AGTGGGCCCCTGAGCTGAGCACAGGGCCAAAGCAGC...CCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCAGGTTCCCCTGGGCTTaGCTGAGCCTCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: VLSTVQSQRKGEPQLLRGRFPWA*LSLRRL
Trigger: CAGCCGCCTGAGGCTCAGCCAAGCCCAGGGGAACCT...GCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGCTCCATAGTGGAAGGTaGCGTCACGGCTCAAGCGGG +
Preference number: 4 (lower is better)
Translates to: PITEKGRASAPPWPTSAGLHSGR*RHGSSG
Trigger: CCCGCTTGAGCCGTGACGCCACCTTCCACTATGGAG...CCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCCTGCAGGGAAGCATCTaGTCGCATGACTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: EKGRASAPPWPTSAGASPLQGSI*SHDCQS
Trigger: GCTCTGACAGTCATGCGACCAGATGCTTCCCTGCAG...GGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATGTGGCCAACATCCGCTaGGGCATCACCCGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: SQRKGEPQLLRGQHPLGHVANIR*GITRLV
Trigger: GACTAAGCGGGTGATGCCCCAGCGGATGTTGGCCAC...ATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp ATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCAGTGGCCAACATCCGCTaGGGCATCACCCGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: ITEKGRASAPPWPTSAGAVANIR*GITRLV
Trigger: GACTAAGCGGGTGATGCCCCAGCGGATGTTGGCCAC...TGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GCTGAGACTAGGCAAACAGAAAGGATGACAAAGGGCTGCGTCTGGACTGCCCCCGCAGGTGGAAGATGGTaGGGCGGAAGGTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: AETRQTERMTKGCVWTAPAGGRW*GGRWSS
Trigger: GGAGGACCACCTTCCGCCTCACCATCTTCCACCTGC...GGGGGCAGTCCAGACGCAGCCCTTTGTCATCCTTTCTGTTTGCCTAGTCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp TCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGCAGCCACGTTCTGGATaGAGAGACGGTACACGCCGG +
Preference number: 4 (lower is better)
Translates to: SNHRERESLSSSVANIRWQPRSG*RDGTRR
Trigger: CCGGCGTGTACCGTCTCTTCATCCAGAACGTGGCTG...CCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp TGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCCGGTACCATTCCTTCTaGGGGCTGGGCAGCCACTCC +
Preference number: 4 (lower is better)
Translates to: CCQLSNHRERESLSSSVARYHSF*GLGSHS
Trigger: GGAGTGGCTGCCCAGCCCTCAGAAGGAATGGTACCG...GGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GCTGAGACTAGGCAAACAGAAAGGATGACAAAGGGCTGCGTCTGGACTGCCCCCCGGTACCATTCCTTCTaGGGGCTGGGCAGCCACTCC +
Preference number: 4 (lower is better)
Translates to: AETRQTERMTKGCVWTAPRYHSF*GLGSHS
Trigger: GGAGTGGCTGCCCAGCCCTCAGAAGGAATGGTACCG...GGGGGCAGTCCAGACGCAGCCCTTTGTCATCCTTTCTGTTTGCCTAGTCTCAGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp ACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCCCCTGGATGGATACTaGGAACAGGGGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TVQSQRKGEPQLLRGQHPPLDGY*EQGAPG
Trigger: GCCTGGAGCCCCCTGTTCTCAGTATCCATCCAGGGG...CGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp TCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCCCTGGTCAGAAGGCTaGAGGTGGAAGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SQRKGEPQLLRGQHPLGHPWSEG*RWKMVR
Trigger: CCTCACCATCTTCCACCTGCAGCCTTCTGACCAGGG...ATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp ATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCACCACCTCCACGGAGATaGTGCTCTCCAAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: ITEKGRASAPPWPTSAGAPPPRR*CSPSGL
Trigger: AAGGCCACTTGGAGAGCAGCATCTCCGTGGAGGTGG...TGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318837.6
ENST00000369483.5
CDS-3UTR GCA 90 bp ACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCAGTCCAGCTGGAAAGCTaGCTTCTCAGAGACCGTGGC +
Preference number: 4 (lower is better)
Translates to: TEKGRASAPPWPTSAGASVQLES*LLRDRG
Trigger: GCCACGGTCTCTGAGAAGGCAGCTTTCCAGCTGGAC...TGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp AATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCGTCCAGCTGGAAAGCTaGCTTCTCAGAGACCGTGGC +
Preference number: 4 (lower is better)
Translates to: NHRERESLSSSVANIRWGVQLES*LLRDRG
Trigger: GCCACGGTCTCTGAGAAGGCAGCTTTCCAGCTGGAC...GCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTCTGGAAGCGAAGCCTaGCCTCCCAAGGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: LSNHRERESLSSSVANIRSGSEA*PPKDCP
Trigger: AGGGCAGTCCTTGGGAGGGCAGGCTTCGCTTCCAGA...GCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp TGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGCTGCTTTGGCCCTGTaGTCAGCTCAGGGGCCCACT +
Preference number: 4 (lower is better)
Translates to: CPITEKGRASAPPWPTSAAALAL*SAQGPT
Trigger: AGTGGGCCCCTGAGCTGAGCACAGGGCCAAAGCAGC...AGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGCCTCCGTCAGGTGTCTaGCATGGCTGCTTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VQSQRKGEPQLLRGQHPLPPSGV*HGCFGP
Trigger: AGGGCCAAAGCAGCCATGGCAGACACCTGACGGAGG...CAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATGTCAGCCAGCCCCGTaGCCTCCGTCAGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: VNCPITEKGRASAPPWPTCQPAP*PPSGVC
Trigger: GCAGACACCTGACGGAGGGCACGGGGCTGGCTGACA...TGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CTCCAGGGAGGTAGATATTTCTCTGCACTCTCCAACACCAGGCCCTGGAAACCCTGTCAGCCAGCCCCGTaGCCTCCGTCAGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LQGGRYFSALSNTRPWKPCQPAP*PPSGVC
Trigger: GCAGACACCTGACGGAGGGCACGGGGCTGGCTGACA...GGGTTTCCAGGGCCTGGTGTTGGAGAGTGCAGAGAAATATCTACCTCCCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp ACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCAGAGCAATCGCCACCATaGTCCCCTCAGCTGGGAATC +
Preference number: 4 (lower is better)
Translates to: TEKGRASAPPWPTSAGASEQSPP*SPQLGI
Trigger: GATTCCCAGCTGAGGGGAGCATGGTGGCGATTGCTC...TGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGCTCTCCAAGTGGCCTTaGGACAGGAGCTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SNHRERESLSSSVANIRWLSKWP*DRSWWC
Trigger: GCACCACCAGCTCCTGTCCCAAGGCCACTTGGAGAG...CCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318837.6
ENST00000369483.5
CDS-3UTR CCA 90 bp TGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACAGGTTCCCCTGGGCTTaGCTGAGCCTCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: CQLSNHRERESLSSSVANRFPWA*LSLRRL
Trigger: CAGCCGCCTGAGGCTCAGCCAAGCCCAGGGGAACCT...GTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTAGCGGGAGTCCTGGCTaGAGCGGGACACGATGCTAC +
Preference number: 4 (lower is better)
Translates to: CPITEKGRASAPPWPTSASGSPG*SGTRCY
Trigger: GTAGCATCGTGTCCCGCTCCAGCCAGGACTCCCGCT...AGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACGCGAAGCGGGAGTCCTaGCTGGAGCGGGACACGATG +
Preference number: 4 (lower is better)
Translates to: CQLSNHRERESLSSSVANAKRES*LERDTM
Trigger: CATCGTGTCCCGCTCCAGCCAGGACTCCCGCTTCGC...GTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GGTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGGCCAAAGACAGCATCTaGGCCCACGCTCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GAVNCPITEKGRASAPPWAKDSI*AHAQQG
Trigger: GCCCTGCTGAGCGTGGGCCCAGATGCTGTCTTTGGC...CCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCCAAGGACTGCCCTCTaGGCCAAAGACAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: QSQRKGEPQLLRGQHPLGPRTAL*AKDSIW
Trigger: CCAGATGCTGTCTTTGGCCCAGAGGGCAGTCCTTGG...CCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp AGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCATTCCTTCTGAGGGCTaGGCAGCCACTCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: RERESLSSSVANIRWGITIPSEG*AATPPH
Trigger: ATGTGGAGGAGTGGCTGCCCAGCCCTCAGAAGGAAT...GGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp ACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGGAACACGGATGCCGATaGGGGCTGACTCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: TVQSQRKGEPQLLRGQHPEHGCR*GLTPPP
Trigger: CGGAGGAGGAGTCAGCCCCCATCGGCATCCGTGTTC...CGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATACAAAGGGCTGCGTCTaGACTGCCCCCAGGCTGATA +
Preference number: 4 (lower is better)
Translates to: SQRKGEPQLLRGQHPLGHTKGCV*TAPRLI
Trigger: TATCAGCCTGGGGGCAGTCCAGACGCAGCCCTTTGT...ATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCACAGCAGGATTAAGGTaGTGGTGCCTGCACACACTG +
Preference number: 4 (lower is better)
Translates to: EKGRASAPPWPTSAGASPTAGLR*WCLHTL
Trigger: CAGTGTGTGCAGGCACCACCACCTTAATCCTGCTGT...GGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp CTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAAGCAGGTGGAAGATGGTaGGGCGGAAGGTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSTVQSQRKGEPQLLRGQAGGRW*GGRWSS
Trigger: GGAGGACCACCTTCCGCCTCACCATCTTCCACCTGC...TTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp AGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCTTATGCTGGTGCGGTTaGGAACCACACACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RERESLSSSVANIRWGITLCWCG*EPHTPA
Trigger: AGCTGGAGTGTGTGGTTCTCAACCGCACCAGCATAA...GGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GGGTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGCAGCCACGTTCTGGATaGAGAGACGGTACACGCCGG +
Preference number: 4 (lower is better)
Translates to: GCCQLSNHRERESLSSSVQPRSG*RDGTRR
Trigger: CCGGCGTGTACCGTCTCTTCATCCAGAACGTGGCTG...CACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp ATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCAGGACTGCCCCCAGGCTaGTATTCTTATGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: ITEKGRASAPPWPTSAGAGLPPG*YSYGSE
Trigger: CTCACTGCCATAAGAATATCAGCCTGGGGGCAGTCC...TGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp ATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCAGACAGGAGCTGGTGGTaGTGGGGGACTTTAACTACC +
Preference number: 4 (lower is better)
Translates to: ITEKGRASAPPWPTSAGADRSWW*WGTLTT
Trigger: GGTAGTTAAAGTCCCCCAGCACCACCAGCTCCTGTC...TGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318837.6
ENST00000369483.5
CDS-3UTR GCA 90 bp CCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGAGCTTTGTCACTGGCTaGAGCACCCTGATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PITEKGRASAPPWPTSAGSFVTG*STLISS
Trigger: GCTGGAGATCAGGGTGCTGCAGCCAGTGACAAAGCT...CCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp ACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCAAGCTTTGTCACTGGCTaGAGCACCCTGATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TEKGRASAPPWPTSAGASSFVTG*STLISS
Trigger: GCTGGAGATCAGGGTGCTGCAGCCAGTGACAAAGCT...TGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGAGCTTTGTCACTGGCTaGAGCACCCTGATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QSQRKGEPQLLRGQHPLGSFVTG*STLISS
Trigger: GCTGGAGATCAGGGTGCTGCAGCCAGTGACAAAGCT...CCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp ACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCACTCCAGCTGTACCTaGCGGGTCTCCAGAACCGAC +
Preference number: 4 (lower is better)
Translates to: TVQSQRKGEPQLLRGQHPHSSCT*RVSRTD
Trigger: GTCGGTTCTGGAGACCCGGCAGGTACAGCTGGAGTG...CGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACCCGCTTATACCACATaGCACTGGGGCTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LSTVQSQRKGEPQLLRGQPAYTT*HWGWAA
Trigger: GGCTGCCCAGCCCCAGTGGCATGTGGTATAAGCGGG...TTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GGTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCCAGCGGTGTCCTCTaGCCGCTTATACCACATGCC +
Preference number: 4 (lower is better)
Translates to: GAVNCPITEKGRASAPPWPSGVL*PLIPHA
Trigger: GGCATGTGGTATAAGCGGGCAGAGGACACCGCTGGG...CCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GCTGAGACTAGGCAAACAGAAAGGATGACAAAGGGCTGCGTCTGGACTGCCCCCCCCAGCGGTGTCCTCTaGCCGCTTATACCACATGCC +
Preference number: 4 (lower is better)
Translates to: AETRQTERMTKGCVWTAPPSGVL*PLIPHA
Trigger: GGCATGTGGTATAAGCGGGCAGAGGACACCGCTGGG...GGGGGCAGTCCAGACGCAGCCCTTTGTCATCCTTTCTGTTTGCCTAGTCTCAGC
59% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp ACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGTGCCCTCCCAAGGACTaGCCTCTGGGCCAAAGACAG +
Preference number: 4 (lower is better)
Translates to: TVQSQRKGEPQLLRGQHPCPPKD*PLGQRQ
Trigger: CTGTCTTTGGCCCAGAGGGCAGTCCTTGGGAGGGCA...CGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GGGTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGTCTGGAAGCGAAGCCTaGCCTCCCAAGGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: GCCQLSNHRERESLSSSVSGSEA*PPKDCP
Trigger: AGGGCAGTCCTTGGGAGGGCAGGCTTCGCTTCCAGA...CACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp AGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCTATCTAGAACACGGATaGCGATGGGGGCTGACTCCT +
Preference number: 4 (lower is better)
Translates to: RERESLSSSVANIRWGITYLEHG*RWGLTP
Trigger: AGGAGTCAGCCCCCATCGGCATCCGTGTTCTAGATA...GGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp TCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATACGGCCAAATCACCCTaGCTGGCATCAACCGTTTGG +
Preference number: 4 (lower is better)
Translates to: SQRKGEPQLLRGQHPLGHTAKSP*LASTVW
Trigger: CCAAACGGTTGATGCCAGGCAGGGTGATTTGGCCGT...ATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp AACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGTCGCTCCCGGCTCCTaGCACATCGTGTGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: NCPITEKGRASAPPWPTSVAPGS*HIVCLA
Trigger: TGCAAGGCACACGATGTGGCAGGAGCCGGGAGCGAC...GGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp ACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGAGGATGACAAAGGGCTaGGTCTGGACTGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: TVQSQRKGEPQLLRGQHPRMTKG*VWTAPR
Trigger: CCTGGGGGCAGTCCAGACGCAGCCCTTTGTCATCCT...CGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp AATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCCATTCCACCATGAGCTaGGAGGTTATGCTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: NHRERESLSSSVANIRWGHSTMS*EVMLVR
Trigger: CCGCACCAGCATAACCTCCCAGCTCATGGTGGAATG...GCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp ACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCTTCTCAGAGACCGTaGCATTGGGGACCACTGTGT +
Preference number: 4 (lower is better)
Translates to: TEKGRASAPPWPTSAGASPSQRP*HWGPLC
Trigger: ACACAGTGGTCCCCAATGCCACGGTCTCTGAGAAGG...TGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCATGCTACAGTCCAGCTaGAAAGCTGCCTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: EKGRASAPPWPTSAGASPMLQSS*KAAFSE
Trigger: CTCTGAGAAGGCAGCTTTCCAGCTGGACTGTAGCAT...GGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CTCCAGGGAGGTAGATATTTCTCTGCACTCTCCAACACCAGGCCCTGGAAACCCAGCGGGAGTCCTGGCTaGAGCGGGACACGATGCTAC +
Preference number: 4 (lower is better)
Translates to: LQGGRYFSALSNTRPWKPSGSPG*SGTRCY
Trigger: GTAGCATCGTGTCCCGCTCCAGCCAGGACTCCCGCT...GGGTTTCCAGGGCCTGGTGTTGGAGAGTGCAGAGAAATATCTACCTCCCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp AACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCCAAAGACAGCATCTaGGCCCACGCTCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: NCPITEKGRASAPPWPTSAKDSI*AHAQQG
Trigger: GCCCTGCTGAGCGTGGGCCCAGATGCTGTCTTTGGC...GGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACAGCCAAAGACAGCATCTaGGCCCACGCTCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VNCPITEKGRASAPPWPTAKDSI*AHAQQG
Trigger: GCCCTGCTGAGCGTGGGCCCAGATGCTGTCTTTGGC...TGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGCCAAGGACTGCCCTCTaGGCCAAAGACAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: SNHRERESLSSSVANIRWPRTAL*AKDSIW
Trigger: CCAGATGCTGTCTTTGGCCCAGAGGGCAGTCCTTGG...CCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATACCGGGGAGAGCCTCTaGAAGCGAAGCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: STVQSQRKGEPQLLRGQHTGESL*KRSLPS
Trigger: GGAGGGCAGGCTTCGCTTCCAGAGGCTCTCCCCGGT...ATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp ATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCAATTCCTTCTGAGGGCTaGGCAGCCACTCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: ITEKGRASAPPWPTSAGAIPSEG*AATPPH
Trigger: ATGTGGAGGAGTGGCTGCCCAGCCCTCAGAAGGAAT...TGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCGAACACGGATGCCGATaGGGGCTGACTCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: QLSNHRERESLSSSVANIEHGCR*GLTPPP
Trigger: CGGAGGAGGAGTCAGCCCCCATCGGCATCCGTGTTC...GATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp AGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCGGAGCAGATGATGGACTaGAGGGTGGGACTTGTATCT +
Preference number: 4 (lower is better)
Translates to: RKGEPQLLRGQHPLGHHPEQMMD*RVGLVS
Trigger: AGATACAAGTCCCACCCTCCAGTCCATCATCTGCTC...CGGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATTCTATGGCCCCTGGATaGATACTGAGAACAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SQRKGEPQLLRGQHPLGHSMAPG*ILRTGG
Trigger: GCCCCCTGTTCTCAGTATCCATCCAGGGGCCATAGA...ATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp ACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGGTGGCCAACATCCGCTaGGGCATCACCCGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: TVQSQRKGEPQLLRGQHPVANIR*GITRLV
Trigger: GACTAAGCGGGTGATGCCCCAGCGGATGTTGGCCAC...CGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TCAGGCAACAGCAGGATTAAGGTGGTGGTGCCTGCACACACTGTCTCACAGGAGGCACAGACACTGGCCTaGGGAATCCCATGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SGNSRIKVVVPAHTVSQEAQTLA*GIPWPP
Trigger: GGGAGGCCATGGGATTCCCCAGGCCAGTGTCTGTGC...CTCCTGTGAGACAGTGTGTGCAGGCACCACCACCTTAATCCTGCTGTTGCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp CAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGTTATGCTGGTGCGGTTaGGAACCACACACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QSQRKGEPQLLRGQHPLGLCWCG*EPHTPA
Trigger: AGCTGGAGTGTGTGGTTCTCAACCGCACCAGCATAA...CCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp TCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCAAACCATTCCACCATaGGCTGGGAGGTTATGCTGG +
Preference number: 4 (lower is better)
Translates to: SQRKGEPQLLRGQHPLGHQTIPP*AGRLCW
Trigger: CCAGCATAACCTCCCAGCTCATGGTGGAATGGTTTG...ATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp AATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCCAAACCATTCCACCATaGGCTGGGAGGTTATGCTGG +
Preference number: 4 (lower is better)
Translates to: NHRERESLSSSVANIRWGQTIPP*AGRLCW
Trigger: CCAGCATAACCTCCCAGCTCATGGTGGAATGGTTTG...GCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp CAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACGAGTGGAGGCAAGTGTaGAAACTCCCCTATGCTACA +
Preference number: 4 (lower is better)
Translates to: QRKGEPQLLRGQHPLGHHEWRQV*KLPYAT
Trigger: TGTAGCATAGGGGAGTTTTCACACTTGCCTCCACTC...GTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp CAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGGGCAGTCTGTCTCTGTaGCTGACTGGGAACTTGGAA +
Preference number: 4 (lower is better)
Translates to: QSQRKGEPQLLRGQHPLGGSLSL*LTGNLE
Trigger: TTCCAAGTTCCCAGTCAGTCACAGAGACAGACTGCC...CCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp TCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATGGCAAACAGAAAGGATaGCAAAGGGCTGCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SQRKGEPQLLRGQHPLGHGKQKG*QRAASG
Trigger: TCCAGACGCAGCCCTTTGTCATCCTTTCTGTTTGCC...ATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp TCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCTGTCAGAAAATGGCTaGGCAATCGCCACCATGCTC +
Preference number: 4 (lower is better)
Translates to: SQRKGEPQLLRGQHPLGHLSENG*AIATML
Trigger: GAGCATGGTGGCGATTGCTCAGCCATTTTCTGACAG...ATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GGTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCCTGGTCAGAAGGCTaGAGGTGGAAGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GAVNCPITEKGRASAPPWPWSEG*RWKMVR
Trigger: CCTCACCATCTTCCACCTGCAGCCTTCTGACCAGGG...CCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGTGGAGCGGGACACGATaGTACAGTCCAGCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: VQSQRKGEPQLLRGQHPLWSGTR*YSPAGK
Trigger: CTTTCCAGCTGGACTGTAGCATCGTGTCCCGCTCCA...CAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGTATCTAGAACACGGATaGCGATGGGGGCTGACTCCT +
Preference number: 4 (lower is better)
Translates to: PITEKGRASAPPWPTSAGYLEHG*RWGLTP
Trigger: AGGAGTCAGCCCCCATCGGCATCCGTGTTCTAGATA...CCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACTCCTGCCACATCGTGTaGCTTGCAGTTTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: QRKGEPQLLRGQHPLGHHSCHIV*LAVSTE
Trigger: TTCAGTGGAAACTGCAAGGCACACGATGTGGCAGGA...GTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCCAGAGTTTGGGTaGTGTCAACTGTCCAATCAC +
Preference number: 4 (lower is better)
Translates to: HRERESLSSSVANIRWGITPEFG*CQLSNH
Trigger: GTGATTGGACAGTTGACAGCACCCAAACTCTGGGGT...GATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp ACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACTAACCAACCAAGACTaGCACCGAGAGGCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: TEKGRASAPPWPTSAGASLTNQD*HREAVC
Trigger: ACAGACTGCCTCTCGGTGGCAGTCTTGGTTGGTTAG...TGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp TCAGGCAACAGCAGGATTAAGGTGGTGGTGCCTGCACACACTGTCTCACAGGAGCCTCCGTCAGGTGTCTaGCATGGCTGCTTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SGNSRIKVVVPAHTVSQEPPSGV*HGCFGP
Trigger: AGGGCCAAAGCAGCCATGGCAGACACCTGACGGAGG...CTCCTGTGAGACAGTGTGTGCAGGCACCACCACCTTAATCCTGCTGTTGCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp AAAGTATCTGCCGAGCAGCCCAGGCCACCTGCATACCTGCAGACCCTTGAAGGAGGGCTGCGTCTGGACTaGCCCCAGGCTGATATTCTT +
Preference number: 4 (lower is better)
Translates to: KVSAEQPRPPAYLQTLEGGLRLD*PQADIL
Trigger: AAGAATATCAGCCTGGGGGCAGTCCAGACGCAGCCC...TCCTTCAAGGGTCTGCAGGTATGCAGGTGGCCTGGGCTGCTCGGCAGATACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGAATCAGCAAAGTATCTaGCGAGCAGCCCAGGCCACC +
Preference number: 4 (lower is better)
Translates to: VQSQRKGEPQLLRGQHPLNQQSI*RAAQAT
Trigger: GGTGGCCTGGGCTGCTCGGCAGATACTTTGCTGATT...CAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GCTGAGACTAGGCAAACAGAAAGGATGACAAAGGGCTGCGTCTGGACTGCCCCCGAGCAATCGCCACCATaGTCCCCTCAGCTGGGAATC +
Preference number: 4 (lower is better)
Translates to: AETRQTERMTKGCVWTAPEQSPP*SPQLGI
Trigger: GATTCCCAGCTGAGGGGAGCATGGTGGCGATTGCTC...GGGGGCAGTCCAGACGCAGCCCTTTGTCATCCTTTCTGTTTGCCTAGTCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp TCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATGGATTAAGGTGGTGGTaGCTGCACACACTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: SQRKGEPQLLRGQHPLGHGLRWW*LHTLSH
Trigger: GTGAGACAGTGTGTGCAGGCACCACCACCTTAATCC...ATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp AGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCGAATTCTTTGTCAGTTaGCTGGACGTTGACCACGGC +
Preference number: 4 (lower is better)
Translates to: RERESLSSSVANIRWGITEFFVS*LDVDHG
Trigger: GCCGTGGTCAACGTCCAGCCAACTGACAAAGAATTC...GGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCTCTCCAAGTGGCCTTaGGACAGGAGCTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: QLSNHRERESLSSSVANILSKWP*DRSWWC
Trigger: GCACCACCAGCTCCTGTCCCAAGGCCACTTGGAGAG...GATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318837.6
ENST00000369483.5
CDS-3UTR CCA 90 bp CTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCCTGCAGCTTTGTCACTaGCTGCAGCACCCTGATCTC +
Preference number: 4 (lower is better)
Translates to: LSNHRERESLSSSVANIRLQLCH*LQHPDL
Trigger: GAGATCAGGGTGCTGCAGCCAGTGACAAAGCTGCAG...GCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCCATTCCACCATGAGCTaGGAGGTTATGCTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: LSNHRERESLSSSVANIRHSTMS*EVMLVR
Trigger: CCGCACCAGCATAACCTCCCAGCTCATGGTGGAATG...GCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GGTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAAGGACTGCCCTCTaGGCCAAAGACAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: GAVNCPITEKGRASAPPWPRTAL*AKDSIW
Trigger: CCAGATGCTGTCTTTGGCCCAGAGGGCAGTCCTTGG...CCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGTCTATGGCCCCTGGATaGATACTGAGAACAGGGGGC +
Preference number: 4 (lower is better)
Translates to: VQSQRKGEPQLLRGQHPLSMAPG*ILRTGG
Trigger: GCCCCCTGTTCTCAGTATCCATCCAGGGGCCATAGA...CAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp ACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGGTCAGGTGTCTGCCATaGCTGCTTTGGCCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: TVQSQRKGEPQLLRGQHPVRCLP*LLWPCA
Trigger: AGCACAGGGCCAAAGCAGCCATGGCAGACACCTGAC...CGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp AGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCGACTGTGACCCCCTCTTaGGATTCAGGATGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: RKGEPQLLRGQHPLGHHPTVTPS*DSGCKF
Trigger: GAACTTACATCCTGAATCCCAAGAGGGGGTCACAGT...CGGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCGATCAGCACAGACACTaGCCTGGGGAATCCCATGGC +
Preference number: 4 (lower is better)
Translates to: CCQLSNHRERESLSSSVADQHRH*PGESHG
Trigger: GCCATGGGATTCCCCAGGCCAGTGTCTGTGCTGATC...GGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCGTGTCTGTCAGAAAATaGCTGAGCAATCGCCACCAT +
Preference number: 4 (lower is better)
Translates to: EKGRASAPPWPTSAGASPVSVRK*LSNRHH
Trigger: ATGGTGGCGATTGCTCAGCCATTTTCTGACAGACAC...GGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp AATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCACAGCAGGATTAAGGTaGTGGTGCCTGCACACACTG +
Preference number: 4 (lower is better)
Translates to: NHRERESLSSSVANIRWGTAGLR*WCLHTL
Trigger: CAGTGTGTGCAGGCACCACCACCTTAATCCTGCTGT...GCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp TCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCAGCCACGTTCTGGATaGAGAGACGGTACACGCCGG +
Preference number: 4 (lower is better)
Translates to: STVQSQRKGEPQLLRGQHQPRSG*RDGTRR
Trigger: CCGGCGTGTACCGTCTCTTCATCCAGAACGTGGCTG...ATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GGGCCCACTTCCAAGTTCACTGGACACTTTCTTTTAAGAGTTTGGCAAAGCACCGATGCCGATGGGGGCTaGCTCCTCCTCCGTCAGCCG +
Preference number: 4 (lower is better)
Translates to: GPTSKFTGHFLLRVWQSTDADGG*LLLRQP
Trigger: CGGCTGACGGAGGAGGAGTCAGCCCCCATCGGCATC...GGTGCTTTGCCAAACTCTTAAAAGAAAGTGTCCAGTGAACTTGGAAGTGGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp TCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCGTCGTTGGAGCAGATaGTGGACTGGAGGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: STVQSQRKGEPQLLRGQHRRWSR*WTGGWD
Trigger: GTCCCACCCTCCAGTCCATCATCTGCTCCAACGACG...ATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp ATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCAGTCTGTCTCTGTGACTaGCTGGGAACTTGGAACACT +
Preference number: 4 (lower is better)
Translates to: ITEKGRASAPPWPTSAGAVCLCD*LGTWNT
Trigger: AGTGTTCCAAGTTCCCAGTCAGTCACAGAGACAGAC...TGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp AATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCGTCTGTCTCTGTGACTaGCTGGGAACTTGGAACACT +
Preference number: 4 (lower is better)
Translates to: NHRERESLSSSVANIRWGVCLCD*LGTWNT
Trigger: AGTGTTCCAAGTTCCCAGTCAGTCACAGAGACAGAC...GCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCGCCGTTTGGGGCTTCTaGCCCATTCTCCAAGACAGT +
Preference number: 4 (lower is better)
Translates to: VLSTVQSQRKGEPQLLRGAVWGF*PILQDS
Trigger: ACTGTCTTGGAGAATGGGTCAGAAGCCCCAAACGGC...GCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp CTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAAGTTTGGCAAAGCACCTaGAGACACAGGCCCACCTGC +
Preference number: 4 (lower is better)
Translates to: LSTVQSQRKGEPQLLRGQVWQST*RHRPTC
Trigger: GCAGGTGGGCCTGTGTCTTCAGGTGCTTTGCCAAAC...TTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCGGACTGCCCCCAGGCTaGTATTCTTATGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: VLSTVQSQRKGEPQLLRGGLPPG*YSYGSE
Trigger: CTCACTGCCATAAGAATATCAGCCTGGGGGCAGTCC...GCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp CAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACTACAGAAACACCCGGTaGAAGAGGGTGTGGTCATAT +
Preference number: 4 (lower is better)
Translates to: QRKGEPQLLRGQHPLGHHYRNTR*KRVWSY
Trigger: ATATGACCACACCCTCTTTCACCGGGTGTTTCTGTA...GTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACACCACCTCCACGGAGATaGTGCTCTCCAAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: VNCPITEKGRASAPPWPTPPPRR*CSPSGL
Trigger: AAGGCCACTTGGAGAGCAGCATCTCCGTGGAGGTGG...TGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318837.6
ENST00000369483.5
CDS-3UTR GCA 90 bp CAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCAGATTGTTCTTGGCTaGCTGCTCTCCATAGTGGAA +
Preference number: 4 (lower is better)
Translates to: QRKGEPQLLRGQHPLGHHQIVLG*LLSIVE
Trigger: TTCCACTATGGAGAGCAGGCAGCCAAGAACAATCTG...GTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp TCAGGCAACAGCAGGATTAAGGTGGTGGTGCCTGCACACACTGTCTCACAGGAGACCACTGTGTCCACCTaGAGGGAAGCATCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: SGNSRIKVVVPAHTVSQETTVST*REASGR
Trigger: GCGACCAGATGCTTCCCTGCAGGTGGACACAGTGGT...CTCCTGTGAGACAGTGTGTGCAGGCACCACCACCTTAATCCTGCTGTTGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GGGTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGTGGAGCGGGACACGATaGTACAGTCCAGCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: GCCQLSNHRERESLSSSVWSGTR*YSPAGK
Trigger: CTTTCCAGCTGGACTGTAGCATCGTGTCCCGCTCCA...CACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp TGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTTGGAGCGGGACACGATaGTACAGTCCAGCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: CPITEKGRASAPPWPTSAWSGTR*YSPAGK
Trigger: CTTTCCAGCTGGACTGTAGCATCGTGTCCCGCTCCA...AGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp TCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATTCTGGAAGCGAAGCCTaGCCTCCCAAGGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: STVQSQRKGEPQLLRGQHSGSEA*PPKDCP
Trigger: AGGGCAGTCCTTGGGAGGGCAGGCTTCGCTTCCAGA...ATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp TGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACTGTATCTTGGGGGCTTaGCTGCAGCACTGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: CQLSNHRERESLSSSVANCILGA*LQHCEP
Trigger: CGGCTCACAGTGCTGCAGGCAAGCCCCCAAGATACA...GTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATGGCAGGAGTAATTaGCTGTATCTTGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: QSQRKGEPQLLRGQHPLGHGRSN*LYLGGL
Trigger: CAAGCCCCCAAGATACAGGCAATTACTCCTGCCATG...CCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGTCCTGCCACATCGTGTaGCTTGCAGTTTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: QSQRKGEPQLLRGQHPLGSCHIV*LAVSTE
Trigger: TTCAGTGGAAACTGCAAGGCACACGATGTGGCAGGA...CCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCAATTTGGAAAGTGTGTaGCGTTTGGGGCTTCTGACC +
Preference number: 4 (lower is better)
Translates to: HRERESLSSSVANIRWGINLESV*RLGLLT
Trigger: GGTCAGAAGCCCCAAACGGCACACACTTTCCAAATT...GATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGTTAGAGACCATCCTTaGAGCTCAGAGCAAGCCAAC +
Preference number: 4 (lower is better)
Translates to: PITEKGRASAPPWPTSAGVRDHP*SSEQAN
Trigger: GTTGGCTTGCTCTGAGCTGCAAGGATGGTCTCTAAC...CCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp TCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATGCCTCCCCTGCAGTCTaGTCGTTCTCAGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: STVQSQRKGEPQLLRGQHASPAV*SFSEQG
Trigger: GCCCTGTTCTGAGAACGAGCAGACTGCAGGGGAGGC...ATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GGTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGGGCCACCTGCATACCTaGAGACCCTTGAAGGATCAG +
Preference number: 4 (lower is better)
Translates to: GAVNCPITEKGRASAPPWGHLHT*RPLKDQ
Trigger: CTGATCCTTCAAGGGTCTGCAGGTATGCAGGTGGCC...CCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp TGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCGGCCACCTGCATACCTaGAGACCCTTGAAGGATCAG +
Preference number: 4 (lower is better)
Translates to: CCQLSNHRERESLSSSVAGHLHT*RPLKDQ
Trigger: CTGATCCTTCAAGGGTCTGCAGGTATGCAGGTGGCC...GGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp AATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCGAATTCTTTGTCAGTTaGCTGGACGTTGACCACGGC +
Preference number: 4 (lower is better)
Translates to: NHRERESLSSSVANIRWGEFFVS*LDVDHG
Trigger: GCCGTGGTCAACGTCCAGCCAACTGACAAAGAATTC...GCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp ACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGTGGGACAGGAGCTGGTaGTGCTGGGGGACTTTAACT +
Preference number: 4 (lower is better)
Translates to: TVQSQRKGEPQLLRGQHPWDRSW*CWGTLT
Trigger: AGTTAAAGTCCCCCAGCACCACCAGCTCCTGTCCCA...CGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318837.6
ENST00000369483.5
CDS-3UTR CCA 90 bp GCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCACATTCCACCATGAGCTaGGAGGTTATGCTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: AVNCPITEKGRASAPPWPHSTMS*EVMLVR
Trigger: CCGCACCAGCATAACCTCCCAGCTCATGGTGGAATG...TGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCTCCATAGTGGAAGGTaGCGTCACGGCTCAAGCGGG +
Preference number: 4 (lower is better)
Translates to: STVQSQRKGEPQLLRGQHLHSGR*RHGSSG
Trigger: CCCGCTTGAGCCGTGACGCCACCTTCCACTATGGAG...ATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGGAGCAGATGATGGACTaGAGGGTGGGACTTGTATCT +
Preference number: 4 (lower is better)
Translates to: QSQRKGEPQLLRGQHPLGEQMMD*RVGLVS
Trigger: AGATACAAGTCCCACCCTCCAGTCCATCATCTGCTC...CCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGGGAGTAGTTGAGGTGTaGCTCTTTGATCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: QSQRKGEPQLLRGQHPLGGVVEV*LFDPQQ
Trigger: CTGCTGTGGATCAAAGAGCCACACCTCAACTACTCC...CCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GGGTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGTCTATGGCCCCTGGATaGATACTGAGAACAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GCCQLSNHRERESLSSSVSMAPG*ILRTGG
Trigger: GCCCCCTGTTCTCAGTATCCATCCAGGGGCCATAGA...CACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACAGCACACGAAGCAAGTTaGCGTTCGGCAGCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: VNCPITEKGRASAPPWPTAHEAS*RSAALK
Trigger: CTTCAGGGCTGCCGAACGCCAACTTGCTTCGTGTGC...TGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCCAAATCACCCTGCCTaGCATCAACCGTTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: QSQRKGEPQLLRGQHPLGPNHPA*HQPFGF
Trigger: AAACCCAAACGGTTGATGCCAGGCAGGGTGATTTGG...CCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp AACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGATCAGCACAGACACTaGCCTGGGGAATCCCATGGC +
Preference number: 4 (lower is better)
Translates to: NCPITEKGRASAPPWPTSDQHRH*PGESHG
Trigger: GCCATGGGATTCCCCAGGCCAGTGTCTGTGCTGATC...GGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp AATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCCATGCTCCCCTCAGCTaGGAATCAGCAAAGTATCTG +
Preference number: 4 (lower is better)
Translates to: NHRERESLSSSVANIRWGHAPLS*ESAKYL
Trigger: CAGATACTTTGCTGATTCCCAGCTGAGGGGAGCATG...GCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp CCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGTCTCCAGCCGAACAGTaGATTCTTTGTCAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: PITEKGRASAPPWPTSAGSPAEQ*ILCQLA
Trigger: AGCCAACTGACAAAGAATTCACTGTTCGGCTGGAGA...CCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp CAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGTCTCCAGCCGAACAGTaGATTCTTTGTCAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: QSQRKGEPQLLRGQHPLGSPAEQ*ILCQLA
Trigger: AGCCAACTGACAAAGAATTCACTGTTCGGCTGGAGA...CCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGTTTCGTCAAAACCTTTaGCGGCCAAATCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: VQSQRKGEPQLLRGQHPLFRQNL*RPNHPA
Trigger: GGCAGGGTGATTTGGCCGTCAAAGGTTTTGACGAAA...CAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp AATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCACAGACAATGCCTTGTaGTCACAGTCTGCTGAGACT +
Preference number: 4 (lower is better)
Translates to: NHRERESLSSSVANIRWGTDNAL*SQSAET
Trigger: AGTCTCAGCAGACTGTGATCACAAGGCATTGTCTGT...GCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp AATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCACTTTTTCCAAACTGTaGCCCCCTCTTGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: NHRERESLSSSVANIRWGTFSKL*PPLGIQ
Trigger: CTGAATCCCAAGAGGGGGTCACAGTTTGGAAAAAGT...GCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GGTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGGAAGGACTCTCCAAATaGAGCCGCCCCTTCAGATTG +
Preference number: 4 (lower is better)
Translates to: GAVNCPITEKGRASAPPWEGLSK*SRPFRL
Trigger: CAATCTGAAGGGGCGGCTGCATTTGGAGAGTCCTTC...CCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCGAAGGACTCTCCAAATaGAGCCGCCCCTTCAGATTG +
Preference number: 4 (lower is better)
Translates to: VLSTVQSQRKGEPQLLRGEGLSK*SRPFRL
Trigger: CAATCTGAAGGGGCGGCTGCATTTGGAGAGTCCTTC...GCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp TCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATACCACTGTGTCCACCTaGAGGGAAGCATCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: STVQSQRKGEPQLLRGQHTTVST*REASGR
Trigger: GCGACCAGATGCTTCCCTGCAGGTGGACACAGTGGT...ATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCCATGGCAGGAGTAATTaGCTGTATCTTGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LSNHRERESLSSSVANIRHGRSN*LYLGGL
Trigger: CAAGCCCCCAAGATACAGGCAATTACTCCTGCCATG...GCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCACGGCCAAATCACCCTaGCTGGCATCAACCGTTTGG +
Preference number: 4 (lower is better)
Translates to: QLSNHRERESLSSSVANITAKSP*LASTVW
Trigger: CCAAACGGTTGATGCCAGGCAGGGTGATTTGGCCGT...GATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GATCACAACATTTGCGCGCAAATAGCTAACCAACCAAGACTGCCACCGAGAGGCAGGATGACAAAGGGCTaGGTCTGGACTGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: DHNICAQIANQPRLPPRGRMTKG*VWTAPR
Trigger: CCTGGGGGCAGTCCAGACGCAGCCCTTTGTCATCCT...GCCTCTCGGTGGCAGTCTTGGTTGGTTAGCTATTTGCGCGCAAATGTTGTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCAATCAGCAAAGTATCTaGCGAGCAGCCCAGGCCACC +
Preference number: 4 (lower is better)
Translates to: QLSNHRERESLSSSVANINQQSI*RAAQAT
Trigger: GGTGGCCTGGGCTGCTCGGCAGATACTTTGCTGATT...GATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAGGATTAAGGTGGTGGTaGCTGCACACACTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: AVNCPITEKGRASAPPWPGLRWW*LHTLSH
Trigger: GTGAGACAGTGTGTGCAGGCACCACCACCTTAATCC...TGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACTGCAGCTTTGTCACTaGCTGCAGCACCCTGATCTC +
Preference number: 4 (lower is better)
Translates to: LSTVQSQRKGEPQLLRGQLQLCH*LQHPDL
Trigger: GAGATCAGGGTGCTGCAGCCAGTGACAAAGCTGCAG...TTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp AACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCCCTCAGGCGGCTGTCTaGCTGTTTCACAGTGACTTC +
Preference number: 4 (lower is better)
Translates to: NCPITEKGRASAPPWPTSPQAAV*LFHSDF
Trigger: GAAGTCACTGTGAAACAGCCAGACAGCCGCCTGAGG...GGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACCTCAGGCGGCTGTCTaGCTGTTTCACAGTGACTTC +
Preference number: 4 (lower is better)
Translates to: LSTVQSQRKGEPQLLRGQPQAAV*LFHSDF
Trigger: GAAGTCACTGTGAAACAGCCAGACAGCCGCCTGAGG...TTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACGTCTCCCGCTCAGGGTaGTTGGGCTTCCATACAAAC +
Preference number: 4 (lower is better)
Translates to: CQLSNHRERESLSSSVANVSRSG*LGFHTN
Trigger: GTTTGTATGGAAGCCCAACCACCCTGAGCGGGAGAC...GTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGCCTTCAGATTGTTCTTaGCTGCCTGCTCTCCATAGT +
Preference number: 4 (lower is better)
Translates to: PITEKGRASAPPWPTSAGPSDCS*LPALHS
Trigger: ACTATGGAGAGCAGGCAGCCAAGAACAATCTGAAGG...CCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp ATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCACCTTCAGATTGTTCTTaGCTGCCTGCTCTCCATAGT +
Preference number: 4 (lower is better)
Translates to: ITEKGRASAPPWPTSAGAPSDCS*LPALHS
Trigger: ACTATGGAGAGCAGGCAGCCAAGAACAATCTGAAGG...TGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACTGCAGGGAAGCATCTaGTCGCATGACTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LSTVQSQRKGEPQLLRGQLQGSI*SHDCQS
Trigger: GCTCTGACAGTCATGCGACCAGATGCTTCCCTGCAG...TTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CTCCAGGGAGGTAGATATTTCTCTGCACTCTCCAACACCAGGCCCTGGAAACCCCCTTCTCAGAGACCGTaGCATTGGGGACCACTGTGT +
Preference number: 4 (lower is better)
Translates to: LQGGRYFSALSNTRPWKPPSQRP*HWGPLC
Trigger: ACACAGTGGTCCCCAATGCCACGGTCTCTGAGAAGG...GGGTTTCCAGGGCCTGGTGTTGGAGAGTGCAGAGAAATATCTACCTCCCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TCAGGCAACAGCAGGATTAAGGTGGTGGTGCCTGCACACACTGTCTCACAGGAGCCTTCTCAGAGACCGTaGCATTGGGGACCACTGTGT +
Preference number: 4 (lower is better)
Translates to: SGNSRIKVVVPAHTVSQEPSQRP*HWGPLC
Trigger: ACACAGTGGTCCCCAATGCCACGGTCTCTGAGAAGG...CTCCTGTGAGACAGTGTGTGCAGGCACCACCACCTTAATCCTGCTGTTGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGAGCAGATGATGGACTaGAGGGTGGGACTTGTATCT +
Preference number: 4 (lower is better)
Translates to: VQSQRKGEPQLLRGQHPLEQMMD*RVGLVS
Trigger: AGATACAAGTCCCACCCTCCAGTCCATCATCTGCTC...CAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGAGTAGTTGAGGTGTaGCTCTTTGATCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: VQSQRKGEPQLLRGQHPLGVVEV*LFDPQQ
Trigger: CTGCTGTGGATCAAAGAGCCACACCTCAACTACTCC...CAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGATGCACCCCAGAGTTTaGGTGCTGTCAACTGTCCAA +
Preference number: 4 (lower is better)
Translates to: SNHRERESLSSSVANIRWMHPRV*VLSTVQ
Trigger: TTGGACAGTTGACAGCACCCAAACTCTGGGGTGCAT...CCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp ACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGGCAGGATTAAGGTGGTaGTGCCTGCACACACTGTCT +
Preference number: 4 (lower is better)
Translates to: TVQSQRKGEPQLLRGQHPAGLRW*CLHTLS
Trigger: AGACAGTGTGTGCAGGCACCACCACCTTAATCCTGC...CGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp TCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGTCTAGTCACTGGCTTTaGCAAATCTGCAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SNHRERESLSSSVANIRWSSHWL*QICRSA
Trigger: TGCTGACCTGCAGATTTGTCAAAGCCAGTGACTAGA...CCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp CTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTCTAGTCACTGGCTTTaGCAAATCTGCAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LSNHRERESLSSSVANIRSSHWL*QICRSA
Trigger: TGCTGACCTGCAGATTTGTCAAAGCCAGTGACTAGA...GCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGACAGACAATGCCTTGTaGTCACAGTCTGCTGAGACT +
Preference number: 4 (lower is better)
Translates to: VQSQRKGEPQLLRGQHPLTDNAL*SQSAET
Trigger: AGTCTCAGCAGACTGTGATCACAAGGCATTGTCTGT...CAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAAGAAGGACTCTCCAAATaGAGCCGCCCCTTCAGATTG +
Preference number: 4 (lower is better)
Translates to: LSTVQSQRKGEPQLLRGQEGLSK*SRPFRL
Trigger: CAATCTGAAGGGGCGGCTGCATTTGGAGAGTCCTTC...TTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp AACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCTATCTAGAACACGGATaGCGATGGGGGCTGACTCCT +
Preference number: 4 (lower is better)
Translates to: NCPITEKGRASAPPWPTSYLEHG*RWGLTP
Trigger: AGGAGTCAGCCCCCATCGGCATCCGTGTTCTAGATA...GGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp TCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGTGAAAACTCCCCTATaGTACAGGAAGGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: SNHRERESLSSSVANIRWVKTPL*YRKGPQ
Trigger: TTGTGGACCCTTCCTGTAGCATAGGGGAGTTTTCAC...CCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCGTGAAAACTCCCCTATaGTACAGGAAGGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: LSNHRERESLSSSVANIRVKTPL*YRKGPQ
Trigger: TTGTGGACCCTTCCTGTAGCATAGGGGAGTTTTCAC...GCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp AACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCCTAACCAACCAAGACTaGCACCGAGAGGCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: NCPITEKGRASAPPWPTSLTNQD*HREAVC
Trigger: ACAGACTGCCTCTCGGTGGCAGTCTTGGTTGGTTAG...GGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGGTTCGCCCTTCCTTTTaGTGTCAGTTGTACGTAAGA +
Preference number: 4 (lower is better)
Translates to: QSQRKGEPQLLRGQHPLGVRPSF*CQLYVR
Trigger: TCTTACGTACAACTGACAGCAAAAGGAAGGGCGAAC...CCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp AGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCGTAAAGGAGATGGCATaGTTGGCCAGAAAAATATGG +
Preference number: 4 (lower is better)
Translates to: RERESLSSSVANIRWGITVKEMA*LARKIW
Trigger: CCATATTTTTCTGGCCAAGCATGCCATCTCCTTTAC...GGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCTCAGGCGGCTGTCTaGCTGTTTCACAGTGACTTC +
Preference number: 4 (lower is better)
Translates to: STVQSQRKGEPQLLRGQHPQAAV*LFHSDF
Trigger: GAAGTCACTGTGAAACAGCCAGACAGCCGCCTGAGG...ATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCATGCTACAGTCCAGCTaGAAAGCTGCCTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: VLSTVQSQRKGEPQLLRGMLQSS*KAAFSE
Trigger: CTCTGAGAAGGCAGCTTTCCAGCTGGACTGTAGCAT...GCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGTTAGTCTATGGCCCCTaGATGGATACTGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: VQSQRKGEPQLLRGQHPLLVYGP*MDTENR
Trigger: CCTGTTCTCAGTATCCATCCAGGGGCCATAGACTAA...CAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp AGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCTGGCATCAACCGTTTaGGTTTCTTCACCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: RERESLSSSVANIRWGITLASTV*VSSPKS
Trigger: ACTTTTTGGTGAAGAAACCCAAACGGTTGATGCCAG...GGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGGTCTCTGTGACTGACTaGGAACTTGGAACACTTTTC +
Preference number: 4 (lower is better)
Translates to: QSQRKGEPQLLRGQHPLGVSVTD*ELGTLF
Trigger: GAAAAGTGTTCCAAGTTCCCAGTCAGTCACAGAGAC...CCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp ATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCAGTCTCTGTGACTGACTaGGAACTTGGAACACTTTTC +
Preference number: 4 (lower is better)
Translates to: ITEKGRASAPPWPTSAGAVSVTD*ELGTLF
Trigger: GAAAAGTGTTCCAAGTTCCCAGTCAGTCACAGAGAC...TGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATAGTAGATGTGGCACCTaGAGCTACTCACTACATTAC +
Preference number: 4 (lower is better)
Translates to: SQRKGEPQLLRGQHPLGHSRCGT*SYSLHY
Trigger: GTAATGTAGTGAGTAGCTCCAGGTGCCACATCTACT...ATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GATCACAACATTTGCGCGCAAATAGCTAACCAACCAAGACTGCCACCGAGAGGCACAAAGGGCTGCGTCTaGACTGCCCCCAGGCTGATA +
Preference number: 4 (lower is better)
Translates to: DHNICAQIANQPRLPPRGTKGCV*TAPRLI
Trigger: TATCAGCCTGGGGGCAGTCCAGACGCAGCCCTTTGT...GCCTCTCGGTGGCAGTCTTGGTTGGTTAGCTATTTGCGCGCAAATGTTGTGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp AAAGTATCTGCCGAGCAGCCCAGGCCACCTGCATACCTGCAGACCCTTGAAGGACATGCTCCCCTCAGCTaGGAATCAGCAAAGTATCTG +
Preference number: 4 (lower is better)
Translates to: KVSAEQPRPPAYLQTLEGHAPLS*ESAKYL
Trigger: CAGATACTTTGCTGATTCCCAGCTGAGGGGAGCATG...TCCTTCAAGGGTCTGCAGGTATGCAGGTGGCCTGGGCTGCTCGGCAGATACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAAGGGTACGGTATACTTaGGGGAGAAAAGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: AVNCPITEKGRASAPPWPRVRYT*GRKGRS
Trigger: AGACCTGCCTTTTCTCCCCCAAGTATACCGTACCCT...TGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp AGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCAACACTTTTCAAGTCTaGCAACTTTCCACACACATG +
Preference number: 4 (lower is better)
Translates to: RERESLSSSVANIRWGITNTFQV*QLSTHM
Trigger: CATGTGTGTGGAAAGTTGTCAGACTTGAAAAGTGTT...GGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp CAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGTCAGTGCTTTCGTCTTaGCTACAAAGTGGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: QSQRKGEPQLLRGQHPLGSVLSS*LQSGSN
Trigger: ATTGGAACCACTTTGTAGTCAAGACGAAAGCACTGA...CCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GATCACAACATTTGCGCGCAAATAGCTAACCAACCAAGACTGCCACCGAGAGGCGCCGTTTGGGGCTTCTaGCCCATTCTCCAAGACAGT +
Preference number: 4 (lower is better)
Translates to: DHNICAQIANQPRLPPRGAVWGF*PILQDS
Trigger: ACTGTCTTGGAGAATGGGTCAGAAGCCCCAAACGGC...GCCTCTCGGTGGCAGTCTTGGTTGGTTAGCTATTTGCGCGCAAATGTTGTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp AACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCATACCTGCAGACCCTTaGAGGATCAGCACAGACACT +
Preference number: 4 (lower is better)
Translates to: NCPITEKGRASAPPWPTSIPADP*RISTDT
Trigger: AGTGTCTGTGCTGATCCTTCAAGGGTCTGCAGGTAT...GGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACAATACCTGCAGACCCTTaGAGGATCAGCACAGACACT +
Preference number: 4 (lower is better)
Translates to: VNCPITEKGRASAPPWPTIPADP*RISTDT
Trigger: AGTGTCTGTGCTGATCCTTCAAGGGTCTGCAGGTAT...TGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp TCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCCATTACCATCCATCTaGCATCGCATTTCCATAGAA +
Preference number: 4 (lower is better)
Translates to: SQRKGEPQLLRGQHPLGHPLPSI*HRISIE
Trigger: TTCTATGGAAATGCGATGTCAGATGGATGGTAATGG...ATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp AAAGTATCTGCCGAGCAGCCCAGGCCACCTGCATACCTGCAGACCCTTGAAGGACAGATTGTTCTTGGCTaGCTGCTCTCCATAGTGGAA +
Preference number: 4 (lower is better)
Translates to: KVSAEQPRPPAYLQTLEGQIVLG*LLSIVE
Trigger: TTCCACTATGGAGAGCAGGCAGCCAAGAACAATCTG...TCCTTCAAGGGTCTGCAGGTATGCAGGTGGCCTGGGCTGCTCGGCAGATACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATGGCAGGAGTAATTaGCTGTATCTTGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LSTVQSQRKGEPQLLRGQHGRSN*LYLGGL
Trigger: CAAGCCCCCAAGATACAGGCAATTACTCCTGCCATG...TTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GGGTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGACGAAGTAGAAGAGTaGGTCGTTGGAGCAGATGAT +
Preference number: 4 (lower is better)
Translates to: GCCQLSNHRERESLSSSVDEVEE*VVGADD
Trigger: ATCATCTGCTCCAACGACGCACTCTTCTACTTCGTC...CACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAGACGAAGTAGAAGAGTaGGTCGTTGGAGCAGATGAT +
Preference number: 4 (lower is better)
Translates to: AVNCPITEKGRASAPPWPDEVEE*VVGADD
Trigger: ATCATCTGCTCCAACGACGCACTCTTCTACTTCGTC...TGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp ATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCACAGGATCACAACATTTaGGCGCAAATAGCTAACCAA +
Preference number: 4 (lower is better)
Translates to: ITEKGRASAPPWPTSAGAQDHNI*AQIANQ
Trigger: TTGGTTAGCTATTTGCGCGCAAATGTTGTGATCCTG...TGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp AACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGTTAGAGACCATCCTTaGAGCTCAGAGCAAGCCAAC +
Preference number: 4 (lower is better)
Translates to: NCPITEKGRASAPPWPTSVRDHP*SSEQAN
Trigger: GTTGGCTTGCTCTGAGCTGCAAGGATGGTCTCTAAC...GGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp AGGAAACGCCAGTCATCTTCCCTCATTGACTCAGCCTATAAAGTAGGAGTCAGCGCCTCCCCTGCAGTCTaGTCGTTCTCAGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: RKRQSSSLIDSAYKVGVSASPAV*SFSEQG
Trigger: GCCCTGTTCTGAGAACGAGCAGACTGCAGGGGAGGC...GCTGACTCCTACTTTATAGGCTGAGTCAATGAGGGAAGATGACTGGCGTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp CAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCAGCTCCAGTAGACAATaGGCAATGAGGTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: QLSNHRERESLSSSVANISSSRQ*AMRSHS
Trigger: GCTGTGAGACCTCATTGCGCATTGTCTACTGGAGCT...GATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GGGCCCACTTCCAAGTTCACTGGACACTTTCTTTTAAGAGTTTGGCAAAGCACCCTCCATAGTGGAAGGTaGCGTCACGGCTCAAGCGGG +
Preference number: 4 (lower is better)
Translates to: GPTSKFTGHFLLRVWQSTLHSGR*RHGSSG
Trigger: CCCGCTTGAGCCGTGACGCCACCTTCCACTATGGAG...GGTGCTTTGCCAAACTCTTAAAAGAAAGTGTCCAGTGAACTTGGAAGTGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATGCTACAGTCCAGCTaGAAAGCTGCCTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: CQLSNHRERESLSSSVANMLQSS*KAAFSE
Trigger: CTCTGAGAAGGCAGCTTTCCAGCTGGACTGTAGCAT...GTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GAAGAAAAACCTAGTCTTCACACCTCCAGGGAGGTAGATATTTCTCTGCACTCTGCGAAGCGGGAGTCCTaGCTGGAGCGGGACACGATG +
Preference number: 4 (lower is better)
Translates to: EEKPSLHTSREVDISLHSAKRES*LERDTM
Trigger: CATCGTGTCCCGCTCCAGCCAGGACTCCCGCTTCGC...AGAGTGCAGAGAAATATCTACCTCCCTGGAGGTGTGAAGACTAGGTTTTTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GAAGAAAAACCTAGTCTTCACACCTCCAGGGAGGTAGATATTTCTCTGCACTCTACCGGGGAGAGCCTCTaGAAGCGAAGCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: EEKPSLHTSREVDISLHSTGESL*KRSLPS
Trigger: GGAGGGCAGGCTTCGCTTCCAGAGGCTCTCCCCGGT...AGAGTGCAGAGAAATATCTACCTCCCTGGAGGTGTGAAGACTAGGTTTTTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp AACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGGAGTAGTTGAGGTGTaGCTCTTTGATCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: NCPITEKGRASAPPWPTSGVVEV*LFDPQQ
Trigger: CTGCTGTGGATCAAAGAGCCACACCTCAACTACTCC...GGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCTTAGTCTATGGCCCCTaGATGGATACTGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: VLSTVQSQRKGEPQLLRGLVYGP*MDTENR
Trigger: CCTGTTCTCAGTATCCATCCAGGGGCCATAGACTAA...GCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCCTGCCCACTTTAATTTaGAAAGTGTGTGCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: LSNHRERESLSSSVANIRLPTLI*KVCAVW
Trigger: CCAAACGGCACACACTTTCCAAATTAAAGTGGGCAG...GCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TCAGGCAACAGCAGGATTAAGGTGGTGGTGCCTGCACACACTGTCTCACAGGAGAGGGTACGGTATACTTaGGGGAGAAAAGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: SGNSRIKVVVPAHTVSQERVRYT*GRKGRS
Trigger: AGACCTGCCTTTTCTCCCCCAAGTATACCGTACCCT...CTCCTGTGAGACAGTGTGTGCAGGCACCACCACCTTAATCCTGCTGTTGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATGCAGGATTAAGGTGGTaGTGCCTGCACACACTGTCT +
Preference number: 4 (lower is better)
Translates to: STVQSQRKGEPQLLRGQHAGLRW*CLHTLS
Trigger: AGACAGTGTGTGCAGGCACCACCACCTTAATCCTGC...ATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp TCGCATTTCCATAGAAATGGCCAAAGAAAGAAGGTCCTGGGGTTTTTCATAGAAGATGCCGATGGGGGCTaGCTCCTCCTCCGTCAGCCG +
Preference number: 4 (lower is better)
Translates to: SHFHRNGQRKKVLGFFIEDADGG*LLLRQP
Trigger: CGGCTGACGGAGGAGGAGTCAGCCCCCATCGGCATC...TTCTATGAAAAACCCCAGGACCTTCTTTCTTTGGCCATTTCTATGGAAATGCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp CTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCCGTTTGGGTATATTTTaGTCCATGGGTGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: LSNHRERESLSSSVANIRRLGIF*SMGGIF
Trigger: GAAAATGCCACCCATGGATCAAAATATACCCAAACG...GCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GATCACAACATTTGCGCGCAAATAGCTAACCAACCAAGACTGCCACCGAGAGGCGGCAAACAGAAAGGATaGCAAAGGGCTGCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: DHNICAQIANQPRLPPRGGKQKG*QRAASG
Trigger: TCCAGACGCAGCCCTTTGTCATCCTTTCTGTTTGCC...GCCTCTCGGTGGCAGTCTTGGTTGGTTAGCTATTTGCGCGCAAATGTTGTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp CACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCGTACCTCTAATGTGTTaGTGCAGCATAATAAATGAG +
Preference number: 4 (lower is better)
Translates to: HRERESLSSSVANIRWGIVPLMC*CSIINE
Trigger: CTCATTTATTATGCTGCATCAACACATTAGAGGTAC...GATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp TGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTAAAAAGTTCAACCTTTaGTGCTATCCCCCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: CPITEKGRASAPPWPTSAKKFNL*CYPPAQ
Trigger: TTGGGCTGGGGGATAGCATCAAAGGTTGAACTTTTT...AGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp AATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCCATTGTAGACATAGATaGATCCAGAGTATTCAGCAG +
Preference number: 4 (lower is better)
Translates to: NHRERESLSSSVANIRWGHCRHR*IQSIQQ
Trigger: CTGCTGAATACTCTGGATTCATCTATGTCTACAATG...GCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp TGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACTACAGAAACACCCGGTaGAAGAGGGTGTGGTCATAT +
Preference number: 4 (lower is better)
Translates to: CQLSNHRERESLSSSVANYRNTR*KRVWSY
Trigger: ATATGACCACACCCTCTTTCACCGGGTGTTTCTGTA...GTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp AACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGACGAAGTAGAAGAGTaGGTCGTTGGAGCAGATGAT +
Preference number: 4 (lower is better)
Translates to: NCPITEKGRASAPPWPTSDEVEE*VVGADD
Trigger: ATCATCTGCTCCAACGACGCACTCTTCTACTTCGTC...GGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp AATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCCTCCTAATGGGGTTATaGAGGATTTCTCTTGTACAT +
Preference number: 4 (lower is better)
Translates to: NHRERESLSSSVANIRWGLLMGL*RISLVH
Trigger: ATGTACAAGAGAAATCCTGCATAACCCCATTAGGAG...GCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp TGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACAATTTGGAAAGTGTGTaGCGTTTGGGGCTTCTGACC +
Preference number: 4 (lower is better)
Translates to: CQLSNHRERESLSSSVANNLESV*RLGLLT
Trigger: GGTCAGAAGCCCCAAACGGCACACACTTTCCAAATT...GTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GGGCCCACTTCCAAGTTCACTGGACACTTTCTTTTAAGAGTTTGGCAAAGCACCGGGCTGCGTCTGGACTaGCCCCAGGCTGATATTCTT +
Preference number: 4 (lower is better)
Translates to: GPTSKFTGHFLLRVWQSTGLRLD*PQADIL
Trigger: AAGAATATCAGCCTGGGGGCAGTCCAGACGCAGCCC...GGTGCTTTGCCAAACTCTTAAAAGAAAGTGTCCAGTGAACTTGGAAGTGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp TCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATAGCTCCAGTAGACAATaGGCAATGAGGTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: STVQSQRKGEPQLLRGQHSSSRQ*AMRSHS
Trigger: GCTGTGAGACCTCATTGCGCATTGTCTACTGGAGCT...ATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GATGATGCCCTAAGAAGGACAAGCAGCACCTGGCCCAACAGTGTAAAAGAACAGGTCTCCCGCTCAGGGTaGTTGGGCTTCCATACAAAC +
Preference number: 4 (lower is better)
Translates to: DDALRRTSSTWPNSVKEQVSRSG*LGFHTN
Trigger: GTTTGTATGGAAGCCCAACCACCCTGAGCGGGAGAC...CTGTTCTTTTACACTGTTGGGCCAGGTGCTGCTTGTCCTTCTTAGGGCATCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAATTAGTCTATGGCCCCTaGATGGATACTGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: LSTVQSQRKGEPQLLRGQLVYGP*MDTENR
Trigger: CCTGTTCTCAGTATCCATCCAGGGGCCATAGACTAA...TTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp ACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGAGTAGATGTGGCACCTaGAGCTACTCACTACATTAC +
Preference number: 4 (lower is better)
Translates to: TVQSQRKGEPQLLRGQHPSRCGT*SYSLHY
Trigger: GTAATGTAGTGAGTAGCTCCAGGTGCCACATCTACT...CGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACGCAAAAACAAAGTCTTaGAAGAGATTCCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: QRKGEPQLLRGQHPLGHHAKTKS*KRFLVT
Trigger: AGTGACAAGGAATCTCTTCCAAGACTTTGTTTTTGC...GTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GGGTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGCTGCCCACTTTAATTTaGAAAGTGTGTGCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: GCCQLSNHRERESLSSSVLPTLI*KVCAVW
Trigger: CCAAACGGCACACACTTTCCAAATTAAAGTGGGCAG...CACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GGGCCCACTTCCAAGTTCACTGGACACTTTCTTTTAAGAGTTTGGCAAAGCACCGTCAGGTGTCTGCCATaGCTGCTTTGGCCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GPTSKFTGHFLLRVWQSTVRCLP*LLWPCA
Trigger: AGCACAGGGCCAAAGCAGCCATGGCAGACACCTGAC...GGTGCTTTGCCAAACTCTTAAAAGAAAGTGTCCAGTGAACTTGGAAGTGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TCAGGCAACAGCAGGATTAAGGTGGTGGTGCCTGCACACACTGTCTCACAGGAGAGGACAAGCAGCACCTaGCCCAACAGTGTAAAAGAA +
Preference number: 4 (lower is better)
Translates to: SGNSRIKVVVPAHTVSQERTSST*PNSVKE
Trigger: TTCTTTTACACTGTTGGGCCAGGTGCTGCTTGTCCT...CTCCTGTGAGACAGTGTGTGCAGGCACCACCACCTTAATCCTGCTGTTGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGTCTCTACATCATGCATaGGTAGTTTTCTTACCCCAT +
Preference number: 4 (lower is better)
Translates to: QSQRKGEPQLLRGQHPLGSLHHA*VVFLPH
Trigger: ATGGGGTAAGAAAACTACCCATGCATGATGTAGAGA...CCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GATGATGCCCTAAGAAGGACAAGCAGCACCTGGCCCAACAGTGTAAAAGAACAGTTATGCTGGTGCGGTTaGGAACCACACACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: DDALRRTSSTWPNSVKEQLCWCG*EPHTPA
Trigger: AGCTGGAGTGTGTGGTTCTCAACCGCACCAGCATAA...CTGTTCTTTTACACTGTTGGGCCAGGTGCTGCTTGTCCTTCTTAGGGCATCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCGTTTGGGTATATTTTaGTCCATGGGTGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: VLSTVQSQRKGEPQLLRGRLGIF*SMGGIF
Trigger: GAAAATGCCACCCATGGATCAAAATATACCCAAACG...GCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GGTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGTCAGTGCTTTCGTCTTaGCTACAAAGTGGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: GAVNCPITEKGRASAPPWSVLSS*LQSGSN
Trigger: ATTGGAACCACTTTGTAGTCAAGACGAAAGCACTGA...CCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp TGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTATATTCTTATGGCAGTaGGAGGCAGGGAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: CPITEKGRASAPPWPTSAIFLWQ*EAGREK
Trigger: TTTTTCTCTCCCTGCCTCTCACTGCCATAAGAATAT...AGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GATGATGCCCTAAGAAGGACAAGCAGCACCTGGCCCAACAGTGTAAAAGAACAGGTAGACAATGCGCAATaGGGTCTCACAGCCACTGGA +
Preference number: 4 (lower is better)
Translates to: DDALRRTSSTWPNSVKEQVDNAQ*GLTATG
Trigger: TCCAGTGGCTGTGAGACCTCATTGCGCATTGTCTAC...CTGTTCTTTTACACTGTTGGGCCAGGTGCTGCTTGTCCTTCTTAGGGCATCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp ACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGGTAAAGGAGATGGCATaGTTGGCCAGAAAAATATGG +
Preference number: 4 (lower is better)
Translates to: TVQSQRKGEPQLLRGQHPVKEMA*LARKIW
Trigger: CCATATTTTTCTGGCCAAGCATGCCATCTCCTTTAC...CGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp AAAGTATCTGCCGAGCAGCCCAGGCCACCTGCATACCTGCAGACCCTTGAAGGACAGCTCTCTACATCATaGATGGGTAGTTTTCTTACC +
Preference number: 4 (lower is better)
Translates to: KVSAEQPRPPAYLQTLEGQLSTS*MGSFLT
Trigger: GGTAAGAAAACTACCCATGCATGATGTAGAGAGCTG...TCCTTCAAGGGTCTGCAGGTATGCAGGTGGCCTGGGCTGCTCGGCAGATACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp ATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCACACTTCCAAGTTCACTaGACACTTTCTTTTAAGAGT +
Preference number: 4 (lower is better)
Translates to: ITEKGRASAPPWPTSAGAHFQVH*TLSFKS
Trigger: ACTCTTAAAAGAAAGTGTCCAGTGAACTTGGAAGTG...TGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp ACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACACTTCCAAGTTCACTaGACACTTTCTTTTAAGAGT +
Preference number: 4 (lower is better)
Translates to: TEKGRASAPPWPTSAGASHFQVH*TLSFKS
Trigger: ACTCTTAAAAGAAAGTGTCCAGTGAACTTGGAAGTG...TGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GATGATGCCCTAAGAAGGACAAGCAGCACCTGGCCCAACAGTGTAAAAGAACAGTTTCGTCAAAACCTTTaGCGGCCAAATCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: DDALRRTSSTWPNSVKEQFRQNL*RPNHPA
Trigger: GGCAGGGTGATTTGGCCGTCAAAGGTTTTGACGAAA...CTGTTCTTTTACACTGTTGGGCCAGGTGCTGCTTGTCCTTCTTAGGGCATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GGTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGAACACTTTTCAAGTCTaGCAACTTTCCACACACATG +
Preference number: 4 (lower is better)
Translates to: GAVNCPITEKGRASAPPWNTFQV*QLSTHM
Trigger: CATGTGTGTGGAAAGTTGTCAGACTTGAAAAGTGTT...CCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GGGCCCACTTCCAAGTTCACTGGACACTTTCTTTTAAGAGTTTGGCAAAGCACCGGCAGTCTGTCTCTGTaGCTGACTGGGAACTTGGAA +
Preference number: 4 (lower is better)
Translates to: GPTSKFTGHFLLRVWQSTGSLSL*LTGNLE
Trigger: TTCCAAGTTCCCAGTCAGTCACAGAGACAGACTGCC...GGTGCTTTGCCAAACTCTTAAAAGAAAGTGTCCAGTGAACTTGGAAGTGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp AACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCATATTCTTATGGCAGTaGGAGGCAGGGAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: NCPITEKGRASAPPWPTSIFLWQ*EAGREK
Trigger: TTTTTCTCTCCCTGCCTCTCACTGCCATAAGAATAT...GGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GCTGAGACTAGGCAAACAGAAAGGATGACAAAGGGCTGCGTCTGGACTGCCCCCATGCAGCATAATAAATaGGAATCAGCATGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: AETRQTERMTKGCVWTAPMQHNK*ESACQA
Trigger: TGCCTGACATGCTGATTCTCATTTATTATGCTGCAT...GGGGGCAGTCCAGACGCAGCCCTTTGTCATCCTTTCTGTTTGCCTAGTCTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp TCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCTTTACATATTTGTGTaGAGCACCTACTTCTTTATC +
Preference number: 4 (lower is better)
Translates to: SQRKGEPQLLRGQHPLGHLYIFV*STYFFI
Trigger: GATAAAGAAGTAGGTGCTGCACACAAATATGTAAAG...ATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp TGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACCAGCTCTCTACATCATaGATGGGTAGTTTTCTTACC +
Preference number: 4 (lower is better)
Translates to: CQLSNHRERESLSSSVANQLSTS*MGSFLT
Trigger: GGTAAGAAAACTACCCATGCATGATGTAGAGAGCTG...GTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GGTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCTAATCTCTCATTTCTaGCAATCCACTTATAGCTCC +
Preference number: 4 (lower is better)
Translates to: GAVNCPITEKGRASAPPWLISHF*QSTYSS
Trigger: GGAGCTATAAGTGGATTGCCAGAAATGAGAGATTAG...CCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp ATTTGTGTGCAGCACCTACTTCTTTATCGCCGTGAACTGAAATCTAAGATTTCAGCGAAGCGGGAGTCCTaGCTGGAGCGGGACACGATG +
Preference number: 4 (lower is better)
Translates to: ICVQHLLLYRRELKSKISAKRES*LERDTM
Trigger: CATCGTGTCCCGCTCCAGCCAGGACTCCCGCTTCGC...TGAAATCTTAGATTTCAGTTCACGGCGATAAAGAAGTAGGTGCTGCACACAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp AACAGAAACAAGAAATCTATAATGGCAGGATCACAACATTTGCGCGCAAATAGCACCGGGGAGAGCCTCTaGAAGCGAAGCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: NRNKKSIMAGSQHLRANSTGESL*KRSLPS
Trigger: GGAGGGCAGGCTTCGCTTCCAGAGGCTCTCCCCGGT...GCTATTTGCGCGCAAATGTTGTGATCCTGCCATTATAGATTTCTTGTTTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp CTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACTGGCATCAACCGTTTaGGTTTCTTCACCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: LSTVQSQRKGEPQLLRGQLASTV*VSSPKS
Trigger: ACTTTTTGGTGAAGAAACCCAAACGGTTGATGCCAG...TTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GATGATGCCCTAAGAAGGACAAGCAGCACCTGGCCCAACAGTGTAAAAGAACAGCCAAATCACCCTGCCTaGCATCAACCGTTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: DDALRRTSSTWPNSVKEQPNHPA*HQPFGF
Trigger: AAACCCAAACGGTTGATGCCAGGCAGGGTGATTTGG...CTGTTCTTTTACACTGTTGGGCCAGGTGCTGCTTGTCCTTCTTAGGGCATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TCAGGCAACAGCAGGATTAAGGTGGTGGTGCCTGCACACACTGTCTCACAGGAGATACAGAAATGTCCTTaGCTTCTCAGTGAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: SGNSRIKVVVPAHTVSQEIQKCP*LLSEGV
Trigger: GACACCTTCACTGAGAAGCCAAGGACATTTCTGTAT...CTCCTGTGAGACAGTGTGTGCAGGCACCACCACCTTAATCCTGCTGTTGCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GATCACAACATTTGCGCGCAAATAGCTAACCAACCAAGACTGCCACCGAGAGGCAGGACAAGCAGCACCTaGCCCAACAGTGTAAAAGAA +
Preference number: 4 (lower is better)
Translates to: DHNICAQIANQPRLPPRGRTSST*PNSVKE
Trigger: TTCTTTTACACTGTTGGGCCAGGTGCTGCTTGTCCT...GCCTCTCGGTGGCAGTCTTGGTTGGTTAGCTATTTGCGCGCAAATGTTGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR CAA 72 bp AGTCTGACAACTTTCCACACACATGCACCCCAGAGTTaGGGTGCTGTCAACTGTCCAATCACAGAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SLTTFHTHAPQS*GAVNCPITEKG
Trigger: CCCTTTCTCTGTGATTGGACAGTTGACAGCACCCAAACTCTGGGGTGCATGTGTGTGGAAAGTTGTCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GCTGAGACTAGGCAAACAGAAAGGATGACAAAGGGCTGCGTCTGGACTGCCCCCGTACCTCTAATGTGTTaGTGCAGCATAATAAATGAG +
Preference number: 4 (lower is better)
Translates to: AETRQTERMTKGCVWTAPVPLMC*CSIINE
Trigger: CTCATTTATTATGCTGCATCAACACATTAGAGGTAC...GGGGGCAGTCCAGACGCAGCCCTTTGTCATCCTTTCTGTTTGCCTAGTCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp TCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCATTACCATCCATCTaGCATCGCATTTCCATAGAA +
Preference number: 4 (lower is better)
Translates to: STVQSQRKGEPQLLRGQHPLPSI*HRISIE
Trigger: TTCTATGGAAATGCGATGTCAGATGGATGGTAATGG...ATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp AACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCCTCCTAATGGGGTTATaGAGGATTTCTCTTGTACAT +
Preference number: 4 (lower is better)
Translates to: NCPITEKGRASAPPWPTSLLMGL*RISLVH
Trigger: ATGTACAAGAGAAATCCTGCATAACCCCATTAGGAG...GGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACACTAATCTCTCATTTCTaGCAATCCACTTATAGCTCC +
Preference number: 4 (lower is better)
Translates to: VNCPITEKGRASAPPWPTLISHF*QSTYSS
Trigger: GGAGCTATAAGTGGATTGCCAGAAATGAGAGATTAG...TGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GAAGAAAAACCTAGTCTTCACACCTCCAGGGAGGTAGATATTTCTCTGCACTCTCTGCAGGGAAGCATCTaGTCGCATGACTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: EEKPSLHTSREVDISLHSLQGSI*SHDCQS
Trigger: GCTCTGACAGTCATGCGACCAGATGCTTCCCTGCAG...AGAGTGCAGAGAAATATCTACCTCCCTGGAGGTGTGAAGACTAGGTTTTTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp AAAGTATCTGCCGAGCAGCCCAGGCCACCTGCATACCTGCAGACCCTTGAAGGAGCAAAAACAAAGTCTTaGAAGAGATTCCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: KVSAEQPRPPAYLQTLEGAKTKS*KRFLVT
Trigger: AGTGACAAGGAATCTCTTCCAAGACTTTGTTTTTGC...TCCTTCAAGGGTCTGCAGGTATGCAGGTGGCCTGGGCTGCTCGGCAGATACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATAGGAGATGGCATGCTTaGCCAGAAAAATATGGGAAA +
Preference number: 4 (lower is better)
Translates to: STVQSQRKGEPQLLRGQHRRWHA*PEKYGK
Trigger: TTTCCCATATTTTTCTGGCCAAGCATGCCATCTCCT...ATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp AAAGTATCTGCCGAGCAGCCCAGGCCACCTGCATACCTGCAGACCCTTGAAGGAAGAACAGGGCTTCACTaGAATCTTTTATCAGACTTA +
Preference number: 4 (lower is better)
Translates to: KVSAEQPRPPAYLQTLEGRTGLH*NLLSDL
Trigger: TAAGTCTGATAAAAGATTCCAGTGAAGCCCTGTTCT...TCCTTCAAGGGTCTGCAGGTATGCAGGTGGCCTGGGCTGCTCGGCAGATACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GATGATGCCCTAAGAAGGACAAGCAGCACCTGGCCCAACAGTGTAAAAGAACAGGTGTCTGTCAGAAAATaGCTGAGCAATCGCCACCAT +
Preference number: 4 (lower is better)
Translates to: DDALRRTSSTWPNSVKEQVSVRK*LSNRHH
Trigger: ATGGTGGCGATTGCTCAGCCATTTTCTGACAGACAC...CTGTTCTTTTACACTGTTGGGCCAGGTGCTGCTTGTCCTTCTTAGGGCATCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR CAA 72 bp CACTTCCAAGTTCACTGGACACTTTCTTTTAAGAGTTaGGCAAAGCACCTGAAGACACAGGCCCACCTGCTC +
Preference number: 4 (lower is better)
Translates to: HFQVHWTLSFKS*AKHLKTQAHLL
Trigger: GAGCAGGTGGGCCTGTGTCTTCAGGTGCTTTGCCAAACTCTTAAAAGAAAGTGTCCAGTGAACTTGGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp TCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATATGCAGCATAATAAATaGGAATCAGCATGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: STVQSQRKGEPQLLRGQHMQHNK*ESACQA
Trigger: TGCCTGACATGCTGATTCTCATTTATTATGCTGCAT...ATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp TCGCATTTCCATAGAAATGGCCAAAGAAAGAAGGTCCTGGGGTTTTTCATAGAACCCTGGTCAGAAGGCTaGAGGTGGAAGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SHFHRNGQRKKVLGFFIEPWSEG*RWKMVR
Trigger: CCTCACCATCTTCCACCTGCAGCCTTCTGACCAGGG...TTCTATGAAAAACCCCAGGACCTTCTTTCTTTGGCCATTTCTATGGAAATGCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp AACAGAAACAAGAAATCTATAATGGCAGGATCACAACATTTGCGCGCAAATAGCCACTCCAGCTGTACCTaGCGGGTCTCCAGAACCGAC +
Preference number: 4 (lower is better)
Translates to: NRNKKSIMAGSQHLRANSHSSCT*RVSRTD
Trigger: GTCGGTTCTGGAGACCCGGCAGGTACAGCTGGAGTG...GCTATTTGCGCGCAAATGTTGTGATCCTGCCATTATAGATTTCTTGTTTCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GGGCCCACTTCCAAGTTCACTGGACACTTTCTTTTAAGAGTTTGGCAAAGCACCCAGATTGTTCTTGGCTaGCTGCTCTCCATAGTGGAA +
Preference number: 4 (lower is better)
Translates to: GPTSKFTGHFLLRVWQSTQIVLG*LLSIVE
Trigger: TTCCACTATGGAGAGCAGGCAGCCAAGAACAATCTG...GGTGCTTTGCCAAACTCTTAAAAGAAAGTGTCCAGTGAACTTGGAAGTGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp AACAGAAACAAGAAATCTATAATGGCAGGATCACAACATTTGCGCGCAAATAGCCCCAGCGGTGTCCTCTaGCCGCTTATACCACATGCC +
Preference number: 4 (lower is better)
Translates to: NRNKKSIMAGSQHLRANSPSGVL*PLIPHA
Trigger: GGCATGTGGTATAAGCGGGCAGAGGACACCGCTGGG...GCTATTTGCGCGCAAATGTTGTGATCCTGCCATTATAGATTTCTTGTTTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp GATCACAACATTTGCGCGCAAATAGCTAACCAACCAAGACTGCCACCGAGAGGCCAGGATCACAACATTTaGGCGCAAATAGCTAACCAA +
Preference number: 4 (lower is better)
Translates to: DHNICAQIANQPRLPPRGQDHNI*AQIANQ
Trigger: TTGGTTAGCTATTTGCGCGCAAATGTTGTGATCCTG...GCCTCTCGGTGGCAGTCTTGGTTGGTTAGCTATTTGCGCGCAAATGTTGTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GATCACAACATTTGCGCGCAAATAGCTAACCAACCAAGACTGCCACCGAGAGGCAGGAGATGGCATGCTTaGCCAGAAAAATATGGGAAA +
Preference number: 4 (lower is better)
Translates to: DHNICAQIANQPRLPPRGRRWHA*PEKYGK
Trigger: TTTCCCATATTTTTCTGGCCAAGCATGCCATCTCCT...GCCTCTCGGTGGCAGTCTTGGTTGGTTAGCTATTTGCGCGCAAATGTTGTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GAAGAAAAACCTAGTCTTCACACCTCCAGGGAGGTAGATATTTCTCTGCACTCTGAGTGGAGGCAAGTGTaGAAACTCCCCTATGCTACA +
Preference number: 4 (lower is better)
Translates to: EEKPSLHTSREVDISLHSEWRQV*KLPYAT
Trigger: TGTAGCATAGGGGAGTTTTCACACTTGCCTCCACTC...AGAGTGCAGAGAAATATCTACCTCCCTGGAGGTGTGAAGACTAGGTTTTTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp AGGAAACGCCAGTCATCTTCCCTCATTGACTCAGCCTATAAAGTAGGAGTCAGCAAAAAGTTCAACCTTTaGTGCTATCCCCCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: RKRQSSSLIDSAYKVGVSKKFNL*CYPPAQ
Trigger: TTGGGCTGGGGGATAGCATCAAAGGTTGAACTTTTT...GCTGACTCCTACTTTATAGGCTGAGTCAATGAGGGAAGATGACTGGCGTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp AACAGAAACAAGAAATCTATAATGGCAGGATCACAACATTTGCGCGCAAATAGCACCACTGTGTCCACCTaGAGGGAAGCATCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: NRNKKSIMAGSQHLRANSTTVST*REASGR
Trigger: GCGACCAGATGCTTCCCTGCAGGTGGACACAGTGGT...GCTATTTGCGCGCAAATGTTGTGATCCTGCCATTATAGATTTCTTGTTTCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp ATTTGTGTGCAGCACCTACTTCTTTATCGCCGTGAACTGAAATCTAAGATTTCATGTATCTTGGGGGCTTaGCTGCAGCACTGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: ICVQHLLLYRRELKSKISCILGA*LQHCEP
Trigger: CGGCTCACAGTGCTGCAGGCAAGCCCCCAAGATACA...TGAAATCTTAGATTTCAGTTCACGGCGATAAAGAAGTAGGTGCTGCACACAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TCGCATTTCCATAGAAATGGCCAAAGAAAGAAGGTCCTGGGGTTTTTCATAGAACTGCAGCTTTGTCACTaGCTGCAGCACCCTGATCTC +
Preference number: 4 (lower is better)
Translates to: SHFHRNGQRKKVLGFFIELQLCH*LQHPDL
Trigger: GAGATCAGGGTGCTGCAGCCAGTGACAAAGCTGCAG...TTCTATGAAAAACCCCAGGACCTTCTTTCTTTGGCCATTTCTATGGAAATGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp AACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGTATATTTTGATCCATaGGTGGCATTTTCAAATGTG +
Preference number: 4 (lower is better)
Translates to: NCPITEKGRASAPPWPTSVYFDP*VAFSNV
Trigger: CACATTTGAAAATGCCACCCATGGATCAAAATATAC...GGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GGGCCCACTTCCAAGTTCACTGGACACTTTCTTTTAAGAGTTTGGCAAAGCACCGAAAGCCCACATCTCTaGAATAAAGAAATGGGGCAA +
Preference number: 4 (lower is better)
Translates to: GPTSKFTGHFLLRVWQSTESPHL*NKEMGQ
Trigger: TTGCCCCATTTCTTTATTTCAGAGATGTGGGCTTTC...GGTGCTTTGCCAAACTCTTAAAAGAAAGTGTCCAGTGAACTTGGAAGTGGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp ATTTGTGTGCAGCACCTACTTCTTTATCGCCGTGAACTGAAATCTAAGATTTCACAAACCATTCCACCATaGGCTGGGAGGTTATGCTGG +
Preference number: 4 (lower is better)
Translates to: ICVQHLLLYRRELKSKISQTIPP*AGRLCW
Trigger: CCAGCATAACCTCCCAGCTCATGGTGGAATGGTTTG...TGAAATCTTAGATTTCAGTTCACGGCGATAAAGAAGTAGGTGCTGCACACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp ATTTGTGTGCAGCACCTACTTCTTTATCGCCGTGAACTGAAATCTAAGATTTCAGTAGACAATGCGCAATaGGGTCTCACAGCCACTGGA +
Preference number: 4 (lower is better)
Translates to: ICVQHLLLYRRELKSKISVDNAQ*GLTATG
Trigger: TCCAGTGGCTGTGAGACCTCATTGCGCATTGTCTAC...TGAAATCTTAGATTTCAGTTCACGGCGATAAAGAAGTAGGTGCTGCACACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp AGGAAACGCCAGTCATCTTCCCTCATTGACTCAGCCTATAAAGTAGGAGTCAGCCTAATCTCTCATTTCTaGCAATCCACTTATAGCTCC +
Preference number: 4 (lower is better)
Translates to: RKRQSSSLIDSAYKVGVSLISHF*QSTYSS
Trigger: GGAGCTATAAGTGGATTGCCAGAAATGAGAGATTAG...GCTGACTCCTACTTTATAGGCTGAGTCAATGAGGGAAGATGACTGGCGTTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GATGATGCCCTAAGAAGGACAAGCAGCACCTGGCCCAACAGTGTAAAAGAACAGAGAACAGGGCTTCACTaGAATCTTTTATCAGACTTA +
Preference number: 4 (lower is better)
Translates to: DDALRRTSSTWPNSVKEQRTGLH*NLLSDL
Trigger: TAAGTCTGATAAAAGATTCCAGTGAAGCCCTGTTCT...CTGTTCTTTTACACTGTTGGGCCAGGTGCTGCTTGTCCTTCTTAGGGCATCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp GAAGAAAAACCTAGTCTTCACACCTCCAGGGAGGTAGATATTTCTCTGCACTCTGAAAGCCCACATCTCTaGAATAAAGAAATGGGGCAA +
Preference number: 4 (lower is better)
Translates to: EEKPSLHTSREVDISLHSESPHL*NKEMGQ
Trigger: TTGCCCCATTTCTTTATTTCAGAGATGTGGGCTTTC...AGAGTGCAGAGAAATATCTACCTCCCTGGAGGTGTGAAGACTAGGTTTTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TCGCATTTCCATAGAAATGGCCAAAGAAAGAAGGTCCTGGGGTTTTTCATAGAAACTGTGACCCCCTCTTaGGATTCAGGATGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: SHFHRNGQRKKVLGFFIETVTPS*DSGCKF
Trigger: GAACTTACATCCTGAATCCCAAGAGGGGGTCACAGT...TTCTATGAAAAACCCCAGGACCTTCTTTCTTTGGCCATTTCTATGGAAATGCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
3UTR CAA 72 bp AGAGATTCCTTGTCACTAGAAAGTTCGCCCTTCCTTTaGCTGTCAGTTGTACGTAAGAGAAATTCGTCCACA +
Preference number: 4 (lower is better)
Translates to: RDSLSLESSPFL*LSVVRKRNSST
Trigger: TGTGGACGAATTTCTCTTACGTACAACTGACAGCAAAAGGAAGGGCGAACTTTCTAGTGACAAGGAATCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GAAGAAAAACCTAGTCTTCACACCTCCAGGGAGGTAGATATTTCTCTGCACTCTTCTCTACATCATGCATaGGTAGTTTTCTTACCCCAT +
Preference number: 4 (lower is better)
Translates to: EEKPSLHTSREVDISLHSSLHHA*VVFLPH
Trigger: ATGGGGTAAGAAAACTACCCATGCATGATGTAGAGA...AGAGTGCAGAGAAATATCTACCTCCCTGGAGGTGTGAAGACTAGGTTTTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp ATTTGTGTGCAGCACCTACTTCTTTATCGCCGTGAACTGAAATCTAAGATTTCAGTTCGCCCTTCCTTTTaGTGTCAGTTGTACGTAAGA +
Preference number: 4 (lower is better)
Translates to: ICVQHLLLYRRELKSKISVRPSF*CQLYVR
Trigger: TCTTACGTACAACTGACAGCAAAAGGAAGGGCGAAC...TGAAATCTTAGATTTCAGTTCACGGCGATAAAGAAGTAGGTGCTGCACACAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp TCGCATTTCCATAGAAATGGCCAAAGAAAGAAGGTCCTGGGGTTTTTCATAGAAATACAGAAATGTCCTTaGCTTCTCAGTGAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: SHFHRNGQRKKVLGFFIEIQKCP*LLSEGV
Trigger: GACACCTTCACTGAGAAGCCAAGGACATTTCTGTAT...TTCTATGAAAAACCCCAGGACCTTCTTTCTTTGGCCATTTCTATGGAAATGCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR TCA 90 bp TCGCATTTCCATAGAAATGGCCAAAGAAAGAAGGTCCTGGGGTTTTTCATAGAACATTGTAGACATAGATaGATCCAGAGTATTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SHFHRNGQRKKVLGFFIEHCRHR*IQSIQQ
Trigger: CTGCTGAATACTCTGGATTCATCTATGTCTACAATG...TTCTATGAAAAACCCCAGGACCTTCTTTCTTTGGCCATTTCTATGGAAATGCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CCA 90 bp GAAGAAAAACCTAGTCTTCACACCTCCAGGGAGGTAGATATTTCTCTGCACTCTGTATATTTTGATCCATaGGTGGCATTTTCAAATGTG +
Preference number: 4 (lower is better)
Translates to: EEKPSLHTSREVDISLHSVYFDP*VAFSNV
Trigger: CACATTTGAAAATGCCACCCATGGATCAAAATATAC...AGAGTGCAGAGAAATATCTACCTCCCTGGAGGTGTGAAGACTAGGTTTTTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR GCA 90 bp AACAGAAACAAGAAATCTATAATGGCAGGATCACAACATTTGCGCGCAAATAGCCTTTACATATTTGTGTaGAGCACCTACTTCTTTATC +
Preference number: 4 (lower is better)
Translates to: NRNKKSIMAGSQHLRANSLYIFV*STYFFI
Trigger: GATAAAGAAGTAGGTGCTGCACACAAATATGTAAAG...GCTATTTGCGCGCAAATGTTGTGATCCTGCCATTATAGATTTCTTGTTTCTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS GCA 90 bp GCACCGGGGAGAGCCTCTGGAAGCGAAGCCTGCCCTCCCAAGGACTaGCCTCTGGGCCAAAGACAGCATCTGGGCCCACGCTCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: APGRASGSEACPPKD*PLGQRQHLGPRSAG
Trigger: CCCTGCTGAGCGTGGGCCCAGATGCTGTCTTTGGCCCAGAGGGCAGTCCTTGGGAGGGCAGGCTTCGCTTCCAGAGGCTCTCCCCGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 90 bp GGAGAGCCTCTGGAAGCGAAGCCTGCCCTCCCAAGGACTGCCCTCTaGGCCAAAGACAGCATCTGGGCCCACGCTCAGCAGGGCCGTCCG +
Preference number: 5 (lower is better)
Translates to: GEPLEAKPALPRTAL*AKDSIWAHAQQGRP
Trigger: CGGACGGCCCTGCTGAGCGTGGGCCCAGATGCTGTCTTTGGCCCAGAGGGCAGTCCTTGGGAGGGCAGGCTTCGCTTCCAGAGGCTCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS TCA 90 bp CACGCCTGCCTAGGGCACACGAAGCAAGTTGGCGTTCGGCAGCCCTaGAGCGGTACCCCAGCGCGAGCAGATTTCTCGCCCCTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: HACLGHTKQVGVRQP*SGTPARADFSPLAL
Trigger: GAGGGCCAGGGGCGAGAAATCTGCTCGCGCTGGGGTACCGCTTCAGGGCTGCCGAACGCCAACTTGCTTCGTGTGCCCTAGGCAGGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS CCA 90 bp AAGCCTGCCCTCCCAAGGACTGCCCTCTGGGCCAAAGACAGCATCTaGGCCCACGCTCAGCAGGGCCGTCCGCTCTGTTGGGTCGTCGTC +
Preference number: 5 (lower is better)
Translates to: KPALPRTALWAKDSI*AHAQQGRPLCWVVV
Trigger: GACGACGACCCAACAGAGCGGACGGCCCTGCTGAGCGTGGGCCCAGATGCTGTCTTTGGCCCAGAGGGCAGTCCTTGGGAGGGCAGGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 90 bp GAGGCGCCACCTGCCCCACGCCTGCCTAGGGCACACGAAGCAAGTTaGCGTTCGGCAGCCCTGAAGCGGTACCCCAGCGCGAGCAGATTT +
Preference number: 5 (lower is better)
Translates to: EAPPAPRLPRAHEAS*RSAALKRYPSASRF
Trigger: AAATCTGCTCGCGCTGGGGTACCGCTTCAGGGCTGCCGAACGCCAACTTGCTTCGTGTGCCCTAGGCAGGCGTGGGGCAGGTGGCGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS CCA 90 bp AAAGACAGCATCTGGGCCCACGCTCAGCAGGGCCGTCCGCTCTGTTaGGTCGTCGTCGTCGTCGTCGTCCTCCTCCTCCTCCTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: KDSIWAHAQQGRPLC*VVVVVVVLLLLLLP
Trigger: AGGGAGGAGGAGGAGGAGGAGGACGACGACGACGACGACGACCCAACAGAGCGGACGGCCCTGCTGAGCGTGGGCCCAGATGCTGTCTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp CACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCGCTCTCCAAGTGGCCTaGGGACAGGAGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: HRERESLSSSVANIRWGIALQVA*GQELVV
Trigger: CACCACCAGCTCCTGTCCCAAGGCCACTTGGAGAGC...GATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318837.6
ENST00000369483.5
CDS TCA 90 bp GGCAGGAGTAATTGCCTGTATCTTGGGGGCTTGCCTGCAGCACTGTaGGCCGGTAGAGCACCGGGGAGAGCCTCTGGAAGCGAAGCCTGC +
Preference number: 5 (lower is better)
Translates to: GRSNCLYLGGLPAAL*AGRAPGRASGSEAC
Trigger: GCAGGCTTCGCTTCCAGAGGCTCTCCCCGGTGCTCTACCGGCTCACAGTGCTGCAGGCAAGCCCCCAAGATACAGGCAATTACTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS GCA 90 bp ATCTGGTCGCATGACTGTCAGAGCTGTCTGCCCAGCGGTGTCCTCTaGCCGCTTATACCACATGCCACTGGGGCTGGGCAGCCACTCCTC +
Preference number: 5 (lower is better)
Translates to: IWSHDCQSCLPSGVL*PLIPHATGAGQPLL
Trigger: GAGGAGTGGCTGCCCAGCCCCAGTGGCATGTGGTATAAGCGGGCAGAGGACACCGCTGGGCAGACAGCTCTGACAGTCATGCGACCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS GCA 90 bp ACCAGGCCACAGCGAAGCGGGAGTCCTGGCTGGAGCGGGACACGATaGTACAGTCCAGCTGGAAAGCTGCCTTCTCAGAGACCGTGGCAT +
Preference number: 5 (lower is better)
Translates to: TRPQRSGSPGWSGTR*YSPAGKLPSQRPWH
Trigger: ATGCCACGGTCTCTGAGAAGGCAGCTTTCCAGCTGGACTGTAGCATCGTGTCCCGCTCCAGCCAGGACTCCCGCTTCGCTGTGGCCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 90 bp GCCCCTTCAGATTGTTCTTGGCTGCCTGCTCTCCATAGTGGAAGGTaGCGTCACGGCTCAAGCGGGCCACAGTCTCCCGCTCAGGGTGGT +
Preference number: 5 (lower is better)
Translates to: APSDCSWLPALHSGR*RHGSSGPQSPAQGG
Trigger: ACCACCCTGAGCGGGAGACTGTGGCCCGCTTGAGCCGTGACGCCACCTTCCACTATGGAGAGCAGGCAGCCAAGAACAATCTGAAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp GAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCGCCTGGAGTTCCGGCTCTaGAAACGCACCAGAAGGATG +
Preference number: 5 (lower is better)
Translates to: ERESLSSSVANIRWGITRLEFRL*KRTRRM
Trigger: CATCCTTCTGGTGCGTTTCAAGAGCCGGAACTCCAG...GCGGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS TCA 90 bp CATGGCAGCTGTAGGTCCCGCTGTCCTGCACAGCCACGTTCTGGATaGAGAGACGGTACACGCCGGGGGAAGGACTCTCCAAATGCAGCC +
Preference number: 5 (lower is better)
Translates to: HGSCRSRCPAQPRSG*RDGTRRGKDSPNAA
Trigger: GGCTGCATTTGGAGAGTCCTTCCCCCGGCGTGTACCGTCTCTTCATCCAGAACGTGGCTGTGCAGGACAGCGGGACCTACAGCTGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS GCA 90 bp GAGGTTATGCTGGTGCGGTTGAGAACCACACACTCCAGCTGTACCTaGCGGGTCTCCAGAACCGACAGGTTCCCCTGGGCTTGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: EVMLVRLRTTHSSCT*RVSRTDRFPWAWLS
Trigger: GCTCAGCCAAGCCCAGGGGAACCTGTCGGTTCTGGAGACCCGGCAGGTACAGCTGGAGTGTGTGGTTCTCAACCGCACCAGCATAACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS GCA 90 bp GTCCTGGCTGGAGCGGGACACGATGCTACAGTCCAGCTGGAAAGCTaGCTTCTCAGAGACCGTGGCATTGGGGACCACTGTGTCCACCTG +
Preference number: 5 (lower is better)
Translates to: VLAGAGHDATVQLES*LLRDRGIGDHCVHL
Trigger: CAGGTGGACACAGTGGTCCCCAATGCCACGGTCTCTGAGAAGGCAGCTTTCCAGCTGGACTGTAGCATCGTGTCCCGCTCCAGCCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS GCA 90 bp CCACTCCTCCACATGGCAGGAGTAATTGCCTGTATCTTGGGGGCTTaGCTGCAGCACTGTGAGCCGGTAGAGCACCGGGGAGAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: PLLHMAGVIACILGA*LQHCEPVEHRGEPL
Trigger: CAGAGGCTCTCCCCGGTGCTCTACCGGCTCACAGTGCTGCAGGCAAGCCCCCAAGATACAGGCAATTACTCCTGCCATGTGGAGGAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 90 bp AGCTGTACCTGCCGGGTCTCCAGAACCGACAGGTTCCCCTGGGCTTaGCTGAGCCTCAGGCGGCTGTCTGGCTGTTTCACAGTGACTTCT +
Preference number: 5 (lower is better)
Translates to: SCTCRVSRTDRFPWA*LSLRRLSGCFTVTS
Trigger: AGAAGTCACTGTGAAACAGCCAGACAGCCGCCTGAGGCTCAGCCAAGCCCAGGGGAACCTGTCGGTTCTGGAGACCCGGCAGGTACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 90 bp AAGCGGGAGTCCTGGCTGGAGCGGGACACGATGCTACAGTCCAGCTaGAAAGCTGCCTTCTCAGAGACCGTGGCATTGGGGACCACTGTG +
Preference number: 5 (lower is better)
Translates to: KRESWLERDTMLQSS*KAAFSETVALGTTV
Trigger: CACAGTGGTCCCCAATGCCACGGTCTCTGAGAAGGCAGCTTTCCAGCTGGACTGTAGCATCGTGTCCCGCTCCAGCCAGGACTCCCGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 90 bp GCTTTAGTCCTCAGGGAATACCAGGCCACAGCGAAGCGGGAGTCCTaGCTGGAGCGGGACACGATGCTACAGTCCAGCTGGAAAGCTGCC +
Preference number: 5 (lower is better)
Translates to: ALVLREYQATAKRES*LERDTMLQSSWKAA
Trigger: GGCAGCTTTCCAGCTGGACTGTAGCATCGTGTCCCGCTCCAGCCAGGACTCCCGCTTCGCTGTGGCCTGGTATTCCCTGAGGACTAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp GTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGCTCTCCAAGTGGCCTaGGGACAGGAGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: VQSQRKGEPQLLRGQHPLALQVA*GQELVV
Trigger: CACCACCAGCTCCTGTCCCAAGGCCACTTGGAGAGC...CAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318837.6
ENST00000369483.5
CDS-3UTR CAA 90 bp ACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCATGCTCACCTGCAGCTTaGTCACTGGCTGCAGCACCC +
Preference number: 5 (lower is better)
Translates to: TEKGRASAPPWPTSAGASCSPAA*SLAAAP
Trigger: GGGTGCTGCAGCCAGTGACAAAGCTGCAGGTGAGCA...TGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp AGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCGCTGGAGTTCCGGCTCTaGAAACGCACCAGAAGGATG +
Preference number: 5 (lower is better)
Translates to: RKGEPQLLRGQHPLGHHPLEFRL*KRTRRM
Trigger: CATCCTTCTGGTGCGTTTCAAGAGCCGGAACTCCAG...CGGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS GCA 90 bp GGAAGGACTCTCCAAATGCAGCCGCCCCTTCAGATTGTTCTTGGCTaGCTGCTCTCCATAGTGGAAGGTGGCGTCACGGCTCAAGCGGGC +
Preference number: 5 (lower is better)
Translates to: GRTLQMQPPLQIVLG*LLSIVEGGVTAQAG
Trigger: GCCCGCTTGAGCCGTGACGCCACCTTCCACTATGGAGAGCAGGCAGCCAAGAACAATCTGAAGGGGCGGCTGCATTTGGAGAGTCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 90 bp AAGGTGGCGTCACGGCTCAAGCGGGCCACAGTCTCCCGCTCAGGGTaGTTGGGCTTCCATACAAACCATTCCACCATGAGCTGGGAGGTT +
Preference number: 5 (lower is better)
Translates to: KVASRLKRATVSRSG*LGFHTNHSTMSWEV
Trigger: AACCTCCCAGCTCATGGTGGAATGGTTTGTATGGAAGCCCAACCACCCTGAGCGGGAGACTGTGGCCCGCTTGAGCCGTGACGCCACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 90 bp CGGGGGAAGGACTCTCCAAATGCAGCCGCCCCTTCAGATTGTTCTTaGCTGCCTGCTCTCCATAGTGGAAGGTGGCGTCACGGCTCAAGC +
Preference number: 5 (lower is better)
Translates to: RGKDSPNAAAPSDCS*LPALHSGRWRHGSS
Trigger: GCTTGAGCCGTGACGCCACCTTCCACTATGGAGAGCAGGCAGCCAAGAACAATCTGAAGGGGCGGCTGCATTTGGAGAGTCCTTCCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 90 bp CACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTaGGGCATCACCCGCTTAGTCTATGGCCCCTGGATGGATACTGAG +
Preference number: 5 (lower is better)
Translates to: HRERESLSSSVANIR*GITRLVYGPWMDTE
Trigger: CTCAGTATCCATCCAGGGGCCATAGACTAAGCGGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp TCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATAGCCGCCCCTTCAGATaGTTCTTGGCTGCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SQRKGEPQLLRGQHPLGHSRPFR*FLAACS
Trigger: AGAGCAGGCAGCCAAGAACAATCTGAAGGGGCGGCT...ATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp CACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCGTAATTGCCTGTATCTaGGGGGCTTGCCTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: HRERESLSSSVANIRWGIVIACI*GACLQH
Trigger: GTGCTGCAGGCAAGCCCCCAAGATACAGGCAATTAC...GATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp GAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCTTCCCATCAGAGTTCTaGCTGGAGTTCCGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: EKGRASAPPWPTSAGASPFPSEF*LEFRLL
Trigger: CAAGAGCCGGAACTCCAGCAAGAACTCTGATGGGAA...GGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 90 bp ACCTCCACGGAGATGCTGCTCTCCAAGTGGCCTTGGGACAGGAGCTaGTGGTGCTGGGGGACTTTAACTACCCAGTTATCTGTGAGGGGG +
Preference number: 5 (lower is better)
Translates to: TSTEMLLSKWPWDRS*WCWGTLTTQLSVRG
Trigger: CCCCCTCACAGATAACTGGGTAGTTAAAGTCCCCCAGCACCACCAGCTCCTGTCCCAAGGCCACTTGGAGAGCAGCATCTCCGTGGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318837.6
ENST00000369483.5
CDS-3UTR CAA 90 bp GGTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGTGCTCACCTGCAGCTTaGTCACTGGCTGCAGCACCC +
Preference number: 5 (lower is better)
Translates to: GAVNCPITEKGRASAPPWCSPAA*SLAAAP
Trigger: GGGTGCTGCAGCCAGTGACAAAGCTGCAGGTGAGCA...CCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp TGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCTCAGAGACCGTGGCATaGGGGACCACTGTGTCCACC +
Preference number: 5 (lower is better)
Translates to: CCQLSNHRERESLSSSVASETVA*GTTVST
Trigger: GGTGGACACAGTGGTCCCCAATGCCACGGTCTCTGA...GGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp ACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCAGTAATTGCCTGTATCTaGGGGGCTTGCCTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: TEKGRASAPPWPTSAGASVIACI*GACLQH
Trigger: GTGCTGCAGGCAAGCCCCCAAGATACAGGCAATTAC...TGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp TGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGCACACGAAGCAAGTaGGCGTTCGGCAGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: CPITEKGRASAPPWPTSAGTRSK*AFGSPE
Trigger: TTCAGGGCTGCCGAACGCCAACTTGCTTCGTGTGCC...AGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp ACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACATGCACCCCAGAGTTaGGGTGCTGTCAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: TEKGRASAPPWPTSAGASHAPQS*GAVNCP
Trigger: TGGACAGTTGACAGCACCCAAACTCTGGGGTGCATG...TGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp CACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCGAAAGTGTGTGCCGTTaGGGGCTTCTGACCCATTCT +
Preference number: 5 (lower is better)
Translates to: HRERESLSSSVANIRWGIESVCR*GLLTHS
Trigger: AGAATGGGTCAGAAGCCCCAAACGGCACACACTTTC...GATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp AGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCATACCTGCAGACCCTaGAAGGATCAGCACAGACAC +
Preference number: 5 (lower is better)
Translates to: RERESLSSSVANIRWGITHTCRP*KDQHRH
Trigger: GTGTCTGTGCTGATCCTTCAAGGGTCTGCAGGTATG...GGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp AATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCGAGGGTACGGTATACTaGGGGGAGAAAAGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: NHRERESLSSSVANIRWGEGTVY*GEKRQV
Trigger: GACCTGCCTTTTCTCCCCCAAGTATACCGTACCCTC...GCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp CAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGACGGAGATGCTGCTCTaGAGGGGGAGGACTATGATG +
Preference number: 5 (lower is better)
Translates to: QSQRKGEPQLLRGQHPLGTEMLL*RGRTMM
Trigger: CATCATAGTCCTCCCCCTCAAGAGCAGCATCTCCGT...CCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369486.8
CDS-3UTR CAA 90 bp CTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCGTTATGCTGGTGCGGTaGAGAACCACACACTCCAGC +
Preference number: 5 (lower is better)
Translates to: LSNHRERESLSSSVANIRVMLVR*RTTHSS
Trigger: GCTGGAGTGTGTGGTTCTCAACCGCACCAGCATAAC...GCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp TCAGGCAACAGCAGGATTAAGGTGGTGGTGCCTGCACACACTGTCTCACAGGAGTCAGAGACCGTGGCATaGGGGACCACTGTGTCCACC +
Preference number: 5 (lower is better)
Translates to: SGNSRIKVVVPAHTVSQESETVA*GTTVST
Trigger: GGTGGACACAGTGGTCCCCAATGCCACGGTCTCTGA...CTCCTGTGAGACAGTGTGTGCAGGCACCACCACCTTAATCCTGCTGTTGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp CCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGACTGGAGGGTGGGACTaGTATCTAGAACACGGATGC +
Preference number: 5 (lower is better)
Translates to: PITEKGRASAPPWPTSAGTGGWD*YLEHGC
Trigger: GCATCCGTGTTCTAGATACAAGTCCCACCCTCCAGT...CCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp CACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCGTTTCGTCAAAACCTTaGACGGCCAAATCACCCTGC +
Preference number: 5 (lower is better)
Translates to: HRERESLSSSVANIRWGIVSSKP*TAKSPC
Trigger: GCAGGGTGATTTGGCCGTCAAAGGTTTTGACGAAAC...GATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp GAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCAGTTCGCCCTTCCTTTaGCTGTCAGTTGTACGTAAG +
Preference number: 5 (lower is better)
Translates to: EKGRASAPPWPTSAGASPSSPFL*LSVVRK
Trigger: CTTACGTACAACTGACAGCAAAAGGAAGGGCGAACT...GGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp TCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGAGGGTACGGTATACTaGGGGGAGAAAAGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: SNHRERESLSSSVANIRWEGTVY*GEKRQV
Trigger: GACCTGCCTTTTCTCCCCCAAGTATACCGTACCCTC...CCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS CCA 90 bp GAGATGCTGCTCTCCAAGTGGCCTTGGGACAGGAGCTGGTGGTGCTaGGGGACTTTAACTACCCAGTTATCTGTGAGGGGGAGGACTATG +
Preference number: 5 (lower is better)
Translates to: EMLLSKWPWDRSWWC*GTLTTQLSVRGRTM
Trigger: CATAGTCCTCCCCCTCACAGATAACTGGGTAGTTAAAGTCCCCCAGCACCACCAGCTCCTGTCCCAAGGCCACTTGGAGAGCAGCATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318837.6
ENST00000369483.5
CDS-3UTR CAA 90 bp TGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCTCCCGCTCAGGGTGGTaGGGCTTCCATACAAACCAT +
Preference number: 5 (lower is better)
Translates to: CCQLSNHRERESLSSSVASRSGW*GFHTNH
Trigger: ATGGTTTGTATGGAAGCCCAACCACCCTGAGCGGGA...GGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp GCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCATCCCGCTCAGGGTGGTaGGGCTTCCATACAAACCAT +
Preference number: 5 (lower is better)
Translates to: AVNCPITEKGRASAPPWPSRSGW*GFHTNH
Trigger: ATGGTTTGTATGGAAGCCCAACCACCCTGAGCGGGA...TGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp TGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACAGCCGCCCCTTCAGATaGTTCTTGGCTGCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: CQLSNHRERESLSSSVANSRPFR*FLAACS
Trigger: AGAGCAGGCAGCCAAGAACAATCTGAAGGGGCGGCT...GTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp GCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAGTAATTGCCTGTATCTaGGGGGCTTGCCTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: AVNCPITEKGRASAPPWPVIACI*GACLQH
Trigger: GTGCTGCAGGCAAGCCCCCAAGATACAGGCAATTAC...TGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp TGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCTTGAGGTGTGGCTCTTaGATCCACAGCAGAGGCACC +
Preference number: 5 (lower is better)
Translates to: CCQLSNHRERESLSSSVALRCGS*IHSRGT
Trigger: GGTGCCTCTGCTGTGGATCAAAGAGCCACACCTCAA...GGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp TGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCCATGCACCCCAGAGTTaGGGTGCTGTCAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: CCQLSNHRERESLSSSVAHAPQS*GAVNCP
Trigger: TGGACAGTTGACAGCACCCAAACTCTGGGGTGCATG...GGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp TCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGAAAGTGTGTGCCGTTaGGGGCTTCTGACCCATTCT +
Preference number: 5 (lower is better)
Translates to: SNHRERESLSSSVANIRWESVCR*GLLTHS
Trigger: AGAATGGGTCAGAAGCCCCAAACGGCACACACTTTC...CCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp CAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCACCCTGCCCACTTTAATTaGGAAAGTGTGTGCCGTTTG +
Preference number: 5 (lower is better)
Translates to: QRKGEPQLLRGQHPLGHHPAHFN*ESVCRL
Trigger: CAAACGGCACACACTTTCCAAATTAAAGTGGGCAGG...GTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp ATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCACGAACAGTGAATTCTTaGTCAGTTGGCTGGACGTTG +
Preference number: 5 (lower is better)
Translates to: ITEKGRASAPPWPTSAGARTVNS*SVGWTL
Trigger: CAACGTCCAGCCAACTGACAAAGAATTCACTGTTCG...TGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp AATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCCGAACAGTGAATTCTTaGTCAGTTGGCTGGACGTTG +
Preference number: 5 (lower is better)
Translates to: NHRERESLSSSVANIRWGRTVNS*SVGWTL
Trigger: CAACGTCCAGCCAACTGACAAAGAATTCACTGTTCG...GCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp TGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCACTGGAGGGTGGGACTaGTATCTAGAACACGGATGC +
Preference number: 5 (lower is better)
Translates to: CCQLSNHRERESLSSSVATGGWD*YLEHGC
Trigger: GCATCCGTGTTCTAGATACAAGTCCCACCCTCCAGT...GGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp TGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACCTGGAGTTCCGGCTCTaGAAACGCACCAGAAGGATG +
Preference number: 5 (lower is better)
Translates to: CQLSNHRERESLSSSVANLEFRL*KRTRRM
Trigger: CATCCTTCTGGTGCGTTTCAAGAGCCGGAACTCCAG...GTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp CAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCTTGAGGTGTGGCTCTTaGATCCACAGCAGAGGCACC +
Preference number: 5 (lower is better)
Translates to: QLSNHRERESLSSSVANILRCGS*IHSRGT
Trigger: GGTGCCTCTGCTGTGGATCAAAGAGCCACACCTCAA...GATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp AATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCCCTGGCATCAACCGTTaGGGTTTCTTCACCAAAAAG +
Preference number: 5 (lower is better)
Translates to: NHRERESLSSSVANIRWGPGINR*GFFTKK
Trigger: CTTTTTGGTGAAGAAACCCAAACGGTTGATGCCAGG...GCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS GCA 90 bp GCTACAGGAAGGGTCCACAACAATTCGGAAGTCGCTCCCGGCTCCTaGCACATCGTGTGCCTTGCAGTTTCCACTGAAATTGCAGACTGT +
Preference number: 5 (lower is better)
Translates to: ATGRVHNNSEVAPGS*HIVCLAVSTEIADC
Trigger: ACAGTCTGCAATTTCAGTGGAAACTGCAAGGCACACGATGTGGCAGGAGCCGGGAGCGACTTCCGAATTGTTGTGGACCCTTCCTGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp CTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAAACTGGAGGGTGGGACTaGTATCTAGAACACGGATGC +
Preference number: 5 (lower is better)
Translates to: LSTVQSQRKGEPQLLRGQTGGWD*YLEHGC
Trigger: GCATCCGTGTTCTAGATACAAGTCCCACCCTCCAGT...TTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp GTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATTCCCATCAGAGTTCTaGCTGGAGTTCCGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: VNCPITEKGRASAPPWPTFPSEF*LEFRLL
Trigger: CAAGAGCCGGAACTCCAGCAAGAACTCTGATGGGAA...TGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp GTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCGTTTCGTCAAAACCTTaGACGGCCAAATCACCCTGC +
Preference number: 5 (lower is better)
Translates to: VLSTVQSQRKGEPQLLRGVSSKP*TAKSPC
Trigger: GCAGGGTGATTTGGCCGTCAAAGGTTTTGACGAAAC...GCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp ACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATCAAAGGAGATGGCATGCTaGGCCAGAAAAATATGGGAA +
Preference number: 5 (lower is better)
Translates to: TEKGRASAPPWPTSAGASKEMAC*ARKIWE
Trigger: TTCCCATATTTTTCTGGCCAAGCATGCCATCTCCTT...TGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp TCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGCATAAGGAGATGGCATGCTaGGCCAGAAAAATATGGGAA +
Preference number: 5 (lower is better)
Translates to: SQRKGEPQLLRGQHPLGHKEMAC*ARKIWE
Trigger: TTCCCATATTTTTCTGGCCAAGCATGCCATCTCCTT...ATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp GTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGCAAAAAGTTCAACCTTaGATGCTATCCCCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: VQSQRKGEPQLLRGQHPLQKVQP*MLSPSP
Trigger: TGGGCTGGGGGATAGCATCAAAGGTTGAACTTTTTG...CAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp AGGAAACGCCAGTCATCTTCCCTCATTGACTCAGCCTATAAAGTAGGAGTCAGCTCAGAGACCGTGGCATaGGGGACCACTGTGTCCACC +
Preference number: 5 (lower is better)
Translates to: RKRQSSSLIDSAYKVGVSSETVA*GTTVST
Trigger: GGTGGACACAGTGGTCCCCAATGCCACGGTCTCTGA...GCTGACTCCTACTTTATAGGCTGAGTCAATGAGGGAAGATGACTGGCGTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp AAAGTATCTGCCGAGCAGCCCAGGCCACCTGCATACCTGCAGACCCTTGAAGGAAGTTCGCCCTTCCTTTaGCTGTCAGTTGTACGTAAG +
Preference number: 5 (lower is better)
Translates to: KVSAEQPRPPAYLQTLEGSSPFL*LSVVRK
Trigger: CTTACGTACAACTGACAGCAAAAGGAAGGGCGAACT...TCCTTCAAGGGTCTGCAGGTATGCAGGTGGCCTGGGCTGCTCGGCAGATACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp GGGCCCACTTCCAAGTTCACTGGACACTTTCTTTTAAGAGTTTGGCAAAGCACCAGCCGCCCCTTCAGATaGTTCTTGGCTGCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GPTSKFTGHFLLRVWQSTSRPFR*FLAACS
Trigger: AGAGCAGGCAGCCAAGAACAATCTGAAGGGGCGGCT...GGTGCTTTGCCAAACTCTTAAAAGAAAGTGTCCAGTGAACTTGGAAGTGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp TGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACCCTGGCATCAACCGTTaGGGTTTCTTCACCAAAAAG +
Preference number: 5 (lower is better)
Translates to: CQLSNHRERESLSSSVANPGINR*GFFTKK
Trigger: CTTTTTGGTGAAGAAACCCAAACGGTTGATGCCAGG...GTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp TCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATGCCACATCGTGTGCCTaGCAGTTTCCACTGAAATTG +
Preference number: 5 (lower is better)
Translates to: STVQSQRKGEPQLLRGQHATSCA*QFPLKL
Trigger: CAATTTCAGTGGAAACTGCAAGGCACACGATGTGGC...ATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp CAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTGGGGTGCAAAAACAAAGTCTaGGAAGAGATTCCTTGTCAC +
Preference number: 5 (lower is better)
Translates to: QSQRKGEPQLLRGQHPLGCKNKV*EEIPCH
Trigger: GTGACAAGGAATCTCTTCCAAGACTTTGTTTTTGCA...CCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS TCA 90 bp ATTCGGATTCCCCAGAGAGAACAGGGCAGGTTTCGTCAAAACCTTTaGCGGCCAAATCACCCTGCCTGGCATCAACCGTTTGGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: IRIPQREQGRFRQNL*RPNHPAWHQPFGFL
Trigger: AAGAAACCCAAACGGTTGATGCCAGGCAGGGTGATTTGGCCGTCAAAGGTTTTGACGAAACCTGCCCTGTTCTCTCTGGGGAATCCGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS GCA 90 bp GTCCACAACAATTCGGAAGTCGCTCCCGGCTCCTGCCACATCGTGTaGCTTGCAGTTTCCACTGAAATTGCAGACTGTAGTGGATTAATC +
Preference number: 5 (lower is better)
Translates to: VHNNSEVAPGSCHIV*LAVSTEIADCSGLI
Trigger: GATTAATCCACTACAGTCTGCAATTTCAGTGGAAACTGCAAGGCACACGATGTGGCAGGAGCCGGGAGCGACTTCCGAATTGTTGTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp GAAGAAAAACCTAGTCTTCACACCTCCAGGGAGGTAGATATTTCTCTGCACTCTTGCTCACCTGCAGCTTaGTCACTGGCTGCAGCACCC +
Preference number: 5 (lower is better)
Translates to: EEKPSLHTSREVDISLHSCSPAA*SLAAAP
Trigger: GGGTGCTGCAGCCAGTGACAAAGCTGCAGGTGAGCA...AGAGTGCAGAGAAATATCTACCTCCCTGGAGGTGTGAAGACTAGGTTTTTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp AGGAAACGCCAGTCATCTTCCCTCATTGACTCAGCCTATAAAGTAGGAGTCAGCGTTATGCTGGTGCGGTaGAGAACCACACACTCCAGC +
Preference number: 5 (lower is better)
Translates to: RKRQSSSLIDSAYKVGVSVMLVR*RTTHSS
Trigger: GCTGGAGTGTGTGGTTCTCAACCGCACCAGCATAAC...GCTGACTCCTACTTTATAGGCTGAGTCAATGAGGGAAGATGACTGGCGTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp GGGCCCACTTCCAAGTTCACTGGACACTTTCTTTTAAGAGTTTGGCAAAGCACCTCCCGCTCAGGGTGGTaGGGCTTCCATACAAACCAT +
Preference number: 5 (lower is better)
Translates to: GPTSKFTGHFLLRVWQSTSRSGW*GFHTNH
Trigger: ATGGTTTGTATGGAAGCCCAACCACCCTGAGCGGGA...GGTGCTTTGCCAAACTCTTAAAAGAAAGTGTCCAGTGAACTTGGAAGTGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp GATGATGCCCTAAGAAGGACAAGCAGCACCTGGCCCAACAGTGTAAAAGAACAGCATACCTGCAGACCCTaGAAGGATCAGCACAGACAC +
Preference number: 5 (lower is better)
Translates to: DDALRRTSSTWPNSVKEQHTCRP*KDQHRH
Trigger: GTGTCTGTGCTGATCCTTCAAGGGTCTGCAGGTATG...CTGTTCTTTTACACTGTTGGGCCAGGTGCTGCTTGTCCTTCTTAGGGCATCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp GATCACAACATTTGCGCGCAAATAGCTAACCAACCAAGACTGCCACCGAGAGGCCGAACAGTGAATTCTTaGTCAGTTGGCTGGACGTTG +
Preference number: 5 (lower is better)
Translates to: DHNICAQIANQPRLPPRGRTVNS*SVGWTL
Trigger: CAACGTCCAGCCAACTGACAAAGAATTCACTGTTCG...GCCTCTCGGTGGCAGTCTTGGTTGGTTAGCTATTTGCGCGCAAATGTTGTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp GCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCATCCTTTTGCTGTCAGTaGTACGTAAGAGAAATTCGT +
Preference number: 5 (lower is better)
Translates to: AVNCPITEKGRASAPPWPSFCCQ*YVREIR
Trigger: ACGAATTTCTCTTACGTACAACTGACAGCAAAAGGA...TGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS GCA 90 bp AGAACAGGGCAGGTTTCGTCAAAACCTTTGACGGCCAAATCACCCTaGCTGGCATCAACCGTTTGGGTTTCTTCACCAAAAAGTCCGTTT +
Preference number: 5 (lower is better)
Translates to: RTGQVSSKPLTAKSP*LASTVWVSSPKSPF
Trigger: AAACGGACTTTTTGGTGAAGAAACCCAAACGGTTGATGCCAGGCAGGGTGATTTGGCCGTCAAAGGTTTTGACGAAACCTGCCCTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS CCA 90 bp TCAAAACCTTTGACGGCCAAATCACCCTGCCTGGCATCAACCGTTTaGGTTTCTTCACCAAAAAGTCCGTTTCCATCCATGGTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: SKPLTAKSPCLASTV*VSSPKSPFPSMVVG
Trigger: ACCTACCACCATGGATGGAAACGGACTTTTTGGTGAAGAAACCCAAACGGTTGATGCCAGGCAGGGTGATTTGGCCGTCAAAGGTTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp AACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCCTCCAGAGAACAGTTTaGGAAATAGAACTTAACTCG +
Preference number: 5 (lower is better)
Translates to: NCPITEKGRASAPPWPTSLQRTV*EIELNS
Trigger: CGAGTTAAGTTCTATTTCCAAAACTGTTCTCTGGAG...GGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp TCAGGCAACAGCAGGATTAAGGTGGTGGTGCCTGCACACACTGTCTCACAGGAGTCCTTTTGCTGTCAGTaGTACGTAAGAGAAATTCGT +
Preference number: 5 (lower is better)
Translates to: SGNSRIKVVVPAHTVSQESFCCQ*YVREIR
Trigger: ACGAATTTCTCTTACGTACAACTGACAGCAAAAGGA...CTCCTGTGAGACAGTGTGTGCAGGCACCACCACCTTAATCCTGCTGTTGCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp CTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAATGCAAAAACAAAGTCTaGGAAGAGATTCCTTGTCAC +
Preference number: 5 (lower is better)
Translates to: LSTVQSQRKGEPQLLRGQCKNKV*EEIPCH
Trigger: GTGACAAGGAATCTCTTCCAAGACTTTGTTTTTGCA...TTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp CTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAAACGTTTGGGTATATTTaGATCCATGGGTGGCATTTT +
Preference number: 5 (lower is better)
Translates to: LSTVQSQRKGEPQLLRGQTFGYI*IHGWHF
Trigger: AAAATGCCACCCATGGATCAAAATATACCCAAACGT...TTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp TGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTTATGCAGGATTTCTCTaGTACATACACAGTTCTTTG +
Preference number: 5 (lower is better)
Translates to: CPITEKGRASAPPWPTSAYAGFL*YIHSSL
Trigger: CAAAGAACTGTGTATGTACAAGAGAAATCCTGCATA...AGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp GTGCTGTCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCTATGCAGGATTTCTCTaGTACATACACAGTTCTTTG +
Preference number: 5 (lower is better)
Translates to: VLSTVQSQRKGEPQLLRGYAGFL*YIHSSL
Trigger: CAAAGAACTGTGTATGTACAAGAGAAATCCTGCATA...GCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGACAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp GATGATGCCCTAAGAAGGACAAGCAGCACCTGGCCCAACAGTGTAAAAGAACAGCCTGCCCACTTTAATTaGGAAAGTGTGTGCCGTTTG +
Preference number: 5 (lower is better)
Translates to: DDALRRTSSTWPNSVKEQPAHFN*ESVCRL
Trigger: CAAACGGCACACACTTTCCAAATTAAAGTGGGCAGG...CTGTTCTTTTACACTGTTGGGCCAGGTGCTGCTTGTCCTTCTTAGGGCATCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp ACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGAATTGCTTTACATATTaGTGTGCAGCACCTACTTCT +
Preference number: 5 (lower is better)
Translates to: TVQSQRKGEPQLLRGQHPNCFTY*CAAPTS
Trigger: AGAAGTAGGTGCTGCACACAAATATGTAAAGCAATT...CGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp AACAGAAACAAGAAATCTATAATGGCAGGATCACAACATTTGCGCGCAAATAGCGGCACACGAAGCAAGTaGGCGTTCGGCAGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: NRNKKSIMAGSQHLRANSGTRSK*AFGSPE
Trigger: TTCAGGGCTGCCGAACGCCAACTTGCTTCGTGTGCC...GCTATTTGCGCGCAAATGTTGTGATCCTGCCATTATAGATTTCTTGTTTCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp GAAGAAAAACCTAGTCTTCACACCTCCAGGGAGGTAGATATTTCTCTGCACTCTGCCACATCGTGTGCCTaGCAGTTTCCACTGAAATTG +
Preference number: 5 (lower is better)
Translates to: EEKPSLHTSREVDISLHSATSCA*QFPLKL
Trigger: CAATTTCAGTGGAAACTGCAAGGCACACGATGTGGC...AGAGTGCAGAGAAATATCTACCTCCCTGGAGGTGTGAAGACTAGGTTTTTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp TCAACTGTCCAATCACAGAGAAAGGGAGAGCCTCAGCTCCTCCGTGGCCAACATAATTGCTTTACATATTaGTGTGCAGCACCTACTTCT +
Preference number: 5 (lower is better)
Translates to: STVQSQRKGEPQLLRGQHNCFTY*CAAPTS
Trigger: AGAAGTAGGTGCTGCACACAAATATGTAAAGCAATT...ATGTTGGCCACGGAGGAGCTGAGGCTCTCCCTTTCTCTGTGATTGGACAGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp AACAGAAACAAGAAATCTATAATGGCAGGATCACAACATTTGCGCGCAAATAGCGTTATGCTGGTGCGGTaGAGAACCACACACTCCAGC +
Preference number: 5 (lower is better)
Translates to: NRNKKSIMAGSQHLRANSVMLVR*RTTHSS
Trigger: GCTGGAGTGTGTGGTTCTCAACCGCACCAGCATAAC...GCTATTTGCGCGCAAATGTTGTGATCCTGCCATTATAGATTTCTTGTTTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp GAAGAAAAACCTAGTCTTCACACCTCCAGGGAGGTAGATATTTCTCTGCACTCTCTCCAGAGAACAGTTTaGGAAATAGAACTTAACTCG +
Preference number: 5 (lower is better)
Translates to: EEKPSLHTSREVDISLHSLQRTV*EIELNS
Trigger: CGAGTTAAGTTCTATTTCCAAAACTGTTCTCTGGAG...AGAGTGCAGAGAAATATCTACCTCCCTGGAGGTGTGAAGACTAGGTTTTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp ATTTGTGTGCAGCACCTACTTCTTTATCGCCGTGAACTGAAATCTAAGATTTCACAAAAAGTTCAACCTTaGATGCTATCCCCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: ICVQHLLLYRRELKSKISQKVQP*MLSPSP
Trigger: TGGGCTGGGGGATAGCATCAAAGGTTGAACTTTTTG...TGAAATCTTAGATTTCAGTTCACGGCGATAAAGAAGTAGGTGCTGCACACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS-3UTR CAA 90 bp AACAGAAACAAGAAATCTATAATGGCAGGATCACAACATTTGCGCGCAAATAGCACGTTTGGGTATATTTaGATCCATGGGTGGCATTTT +
Preference number: 5 (lower is better)
Translates to: NRNKKSIMAGSQHLRANSTFGYI*IHGWHF
Trigger: AAAATGCCACCCATGGATCAAAATATACCCAAACGT...GCTATTTGCGCGCAAATGTTGTGATCCTGCCATTATAGATTTCTTGTTTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS CCA 72 bp GAAGCGGTACCCCAGCGCGAGCAGATTTCTCGCCCCTaGCCCTCTCCCTCCGCGCGCGTCGGACCGTCCTTC +
Preference number: 6 (lower is better)
Translates to: EAVPQREQISRP*PSPSARVGPSF
Trigger: GAAGGACGGTCCGACGCGCGCGGAGGGAGAGGGCCAGGGGCGAGAAATCTGCTCGCGCTGGGGTACCGCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS CCA 72 bp CCTGCCCCACGCCTGCCTAGGGCACACGAAGCAAGTTaGCGTTCGGCAGCCCTGAAGCGGTACCCCAGCGCG +
Preference number: 6 (lower is better)
Translates to: PAPRLPRAHEAS*RSAALKRYPSA
Trigger: CGCGCTGGGGTACCGCTTCAGGGCTGCCGAACGCCAACTTGCTTCGTGTGCCCTAGGCAGGCGTGGGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS GCA 72 bp GGTGGTAGGTCACGGAGGCGCCACCTGCCCCACGCCTaGCTAGGGCACACGAAGCAAGTTGGCGTTCGGCAG +
Preference number: 6 (lower is better)
Translates to: GGRSRRRHLPHA*LGHTKQVGVRQ
Trigger: CTGCCGAACGCCAACTTGCTTCGTGTGCCCTAGGCAGGCGTGGGGCAGGTGGCGCCTCCGTGACCTACCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS CCA 72 bp ATCTGGGCCCACGCTCAGCAGGGCCGTCCGCTCTGTTaGGTCGTCGTCGTCGTCGTCGTCCTCCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: IWAHAQQGRPLC*VVVVVVVLLLL
Trigger: GAGGAGGAGGAGGACGACGACGACGACGACGACCCAACAGAGCGGACGGCCCTGCTGAGCGTGGGCCCAGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CAA 72 bp CATCTGGGCCCACGCTCAGCAGGGCCGTCCGCTCTGTaGGGTCGTCGTCGTCGTCGTCGTCCTCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: HLGPRSAGPSAL*GRRRRRRPPPP
Trigger: AGGAGGAGGAGGACGACGACGACGACGACGACCCAACAGAGCGGACGGCCCTGCTGAGCGTGGGCCCAGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CAA 90 bp CAAAGACAGCATCTGGGCCCACGCTCAGCAGGGCCGTCCGCTCTGTaGGGTCGTCGTCGTCGTCGTCGTCCTCCTCCTCCTCCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: QRQHLGPRSAGPSAL*GRRRRRRPPPPPPP
Trigger: GGGAGGAGGAGGAGGAGGAGGACGACGACGACGACGACGACCCAACAGAGCGGACGGCCCTGCTGAGCGTGGGCCCAGATGCTGTCTTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS GCA 72 bp GGTAGAGCACCGGGGAGAGCCTCTGGAAGCGAAGCCTaGCCTCCCAAGGACTGCCCTCTGGGCCAAAGACAG +
Preference number: 6 (lower is better)
Translates to: GRAPGRASGSEA*PPKDCPLGQRQ
Trigger: CTGTCTTTGGCCCAGAGGGCAGTCCTTGGGAGGGCAGGCTTCGCTTCCAGAGGCTCTCCCCGGTGCTCTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 72 bp CTGGAAGCGAAGCCTGCCCTCCCAAGGACTGCCCTCTaGGCCAAAGACAGCATCTGGGCCCACGCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: LEAKPALPRTAL*AKDSIWAHAQQ
Trigger: CTGCTGAGCGTGGGCCCAGATGCTGTCTTTGGCCCAGAGGGCAGTCCTTGGGAGGGCAGGCTTCGCTTCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS TCA 72 bp CTAGGGCACACGAAGCAAGTTGGCGTTCGGCAGCCCTaGAGCGGTACCCCAGCGCGAGCAGATTTCTCGCCC +
Preference number: 6 (lower is better)
Translates to: LGHTKQVGVRQP*SGTPARADFSP
Trigger: GGGCGAGAAATCTGCTCGCGCTGGGGTACCGCTTCAGGGCTGCCGAACGCCAACTTGCTTCGTGTGCCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS CCA 72 bp TGCCGGGTCTCCAGAACCGACAGGTTCCCCTGGGCTTaGCTGAGCCTCAGGCGGCTGTCTGGCTGTTTCACA +
Preference number: 6 (lower is better)
Translates to: CRVSRTDRFPWA*LSLRRLSGCFT
Trigger: TGTGAAACAGCCAGACAGCCGCCTGAGGCTCAGCCAAGCCCAGGGGAACCTGTCGGTTCTGGAGACCCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 72 bp CTCAGGGAATACCAGGCCACAGCGAAGCGGGAGTCCTaGCTGGAGCGGGACACGATGCTACAGTCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: LREYQATAKRES*LERDTMLQSSW
Trigger: CCAGCTGGACTGTAGCATCGTGTCCCGCTCCAGCCAGGACTCCCGCTTCGCTGTGGCCTGGTATTCCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 72 bp AGGGAGAGCCTCAGCTCCTCCGTGGCCAACATCCGCTaGGGCATCACCCGCTTAGTCTATGGCCCCTGGATG +
Preference number: 6 (lower is better)
Translates to: RESLSSSVANIR*GITRLVYGPWM
Trigger: CATCCAGGGGCCATAGACTAAGCGGGTGATGCCCCAGCGGATGTTGGCCACGGAGGAGCTGAGGCTCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS TCA 72 bp ATTCGCCCTGGTCAGAAGGCTGCAGGTGGAAGATGGTaGGGCGGAAGGTGGTCCTCCCCAGCTTGTCCAGCC +
Preference number: 6 (lower is better)
Translates to: IRPGQKAAGGRW*GGRWSSPACPA
Trigger: GGCTGGACAAGCTGGGGAGGACCACCTTCCGCCTCACCATCTTCCACCTGCAGCCTTCTGACCAGGGCGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS GCA 72 bp CTGGTGCGGTTGAGAACCACACACTCCAGCTGTACCTaGCGGGTCTCCAGAACCGACAGGTTCCCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: LVRLRTTHSSCT*RVSRTDRFPWA
Trigger: AGCCCAGGGGAACCTGTCGGTTCTGGAGACCCGGCAGGTACAGCTGGAGTGTGTGGTTCTCAACCGCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 72 bp GGGAATACCAGGCCACAGCGAAGCGGGAGTCCTGGCTaGAGCGGGACACGATGCTACAGTCCAGCTGGAAAG +
Preference number: 6 (lower is better)
Translates to: GNTRPQRSGSPG*SGTRCYSPAGK
Trigger: CTTTCCAGCTGGACTGTAGCATCGTGTCCCGCTCCAGCCAGGACTCCCGCTTCGCTGTGGCCTGGTATTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS TCA 72 bp TGTAGGTCCCGCTGTCCTGCACAGCCACGTTCTGGATaGAGAGACGGTACACGCCGGGGGAAGGACTCTCCA +
Preference number: 6 (lower is better)
Translates to: CRSRCPAQPRSG*RDGTRRGKDSP
Trigger: TGGAGAGTCCTTCCCCCGGCGTGTACCGTCTCTTCATCCAGAACGTGGCTGTGCAGGACAGCGGGACCTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS TCA 72 bp AATTGCCTGTATCTTGGGGGCTTGCCTGCAGCACTGTaGGCCGGTAGAGCACCGGGGAGAGCCTCTGGAAGC +
Preference number: 6 (lower is better)
Translates to: NCLYLGGLPAAL*AGRAPGRASGS
Trigger: GCTTCCAGAGGCTCTCCCCGGTGCTCTACCGGCTCACAGTGCTGCAGGCAAGCCCCCAAGATACAGGCAATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS GCA 72 bp CAGCGAAGCGGGAGTCCTGGCTGGAGCGGGACACGATaGTACAGTCCAGCTGGAAAGCTGCCTTCTCAGAGA +
Preference number: 6 (lower is better)
Translates to: QRSGSPGWSGTR*YSPAGKLPSQR
Trigger: TCTCTGAGAAGGCAGCTTTCCAGCTGGACTGTAGCATCGTGTCCCGCTCCAGCCAGGACTCCCGCTTCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS GCA 72 bp TGGACTGGAGGGTGGGACTTGTATCTAGAACACGGATaGCGATGGGGGCTGACTCCTCCTCCGTCAGCCGGT +
Preference number: 6 (lower is better)
Translates to: WTGGWDLYLEHG*RWGLTPPPSAG
Trigger: ACCGGCTGACGGAGGAGGAGTCAGCCCCCATCGGCATCCGTGTTCTAGATACAAGTCCCACCCTCCAGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 72 bp GATTGTTCTTGGCTGCCTGCTCTCCATAGTGGAAGGTaGCGTCACGGCTCAAGCGGGCCACAGTCTCCCGCT +
Preference number: 6 (lower is better)
Translates to: DCSWLPALHSGR*RHGSSGPQSPA
Trigger: AGCGGGAGACTGTGGCCCGCTTGAGCCGTGACGCCACCTTCCACTATGGAGAGCAGGCAGCCAAGAACAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 72 bp TCCTGGCTGGAGCGGGACACGATGCTACAGTCCAGCTaGAAAGCTGCCTTCTCAGAGACCGTGGCATTGGGG +
Preference number: 6 (lower is better)
Translates to: SWLERDTMLQSS*KAAFSETVALG
Trigger: CCCCAATGCCACGGTCTCTGAGAAGGCAGCTTTCCAGCTGGACTGTAGCATCGTGTCCCGCTCCAGCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CAA 90 bp GTGGCGTCACGGCTCAAGCGGGCCACAGTCTCCCGCTCAGGGTGGTaGGGCTTCCATACAAACCATTCCACCATGAGCTGGGAGGTTATG +
Preference number: 6 (lower is better)
Translates to: VASRLKRATVSRSGW*GFHTNHSTMSWEVM
Trigger: CATAACCTCCCAGCTCATGGTGGAATGGTTTGTATGGAAGCCCAACCACCCTGAGCGGGAGACTGTGGCCCGCTTGAGCCGTGACGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS GCA 72 bp GGAGCGGGACACGATGCTACAGTCCAGCTGGAAAGCTaGCTTCTCAGAGACCGTGGCATTGGGGACCACTGT +
Preference number: 6 (lower is better)
Translates to: GAGHDATVQLES*LLRDRGIGDHC
Trigger: ACAGTGGTCCCCAATGCCACGGTCTCTGAGAAGGCAGCTTTCCAGCTGGACTGTAGCATCGTGTCCCGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS GCA 72 bp CACATGGCAGGAGTAATTGCCTGTATCTTGGGGGCTTaGCTGCAGCACTGTGAGCCGGTAGAGCACCGGGGA +
Preference number: 6 (lower is better)
Translates to: HMAGVIACILGA*LQHCEPVEHRG
Trigger: TCCCCGGTGCTCTACCGGCTCACAGTGCTGCAGGCAAGCCCCCAAGATACAGGCAATTACTCCTGCCATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 72 bp GGAGGGTGGGACTTGTATCTAGAACACGGATGCCGATaGGGGCTGACTCCTCCTCCGTCAGCCGGTACCATT +
Preference number: 6 (lower is better)
Translates to: GGWDLYLEHGCR*GLTPPPSAGTI
Trigger: AATGGTACCGGCTGACGGAGGAGGAGTCAGCCCCCATCGGCATCCGTGTTCTAGATACAAGTCCCACCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS GCA 72 bp CTCCAAATGCAGCCGCCCCTTCAGATTGTTCTTGGCTaGCTGCTCTCCATAGTGGAAGGTGGCGTCACGGCT +
Preference number: 6 (lower is better)
Translates to: LQMQPPLQIVLG*LLSIVEGGVTA
Trigger: AGCCGTGACGCCACCTTCCACTATGGAGAGCAGGCAGCCAAGAACAATCTGAAGGGGCGGCTGCATTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS GCA 72 bp AGGGAAGCATCTGGTCGCATGACTGTCAGAGCTGTCTaGCCAGCGGTGTCCTCTGCCCGCTTATACCACATG +
Preference number: 6 (lower is better)
Translates to: REASGRMTVRAV*PAVSSARLYHM
Trigger: CATGTGGTATAAGCGGGCAGAGGACACCGCTGGGCAGACAGCTCTGACAGTCATGCGACCAGATGCTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 72 bp CTCTCCAAGTGGCCTTGGGACAGGAGCTGGTGGTGCTaGGGGACTTTAACTACCCAGTTATCTGTGAGGGGG +
Preference number: 6 (lower is better)
Translates to: LSKWPWDRSWWC*GTLTTQLSVRG
Trigger: CCCCCTCACAGATAACTGGGTAGTTAAAGTCCCCCAGCACCACCAGCTCCTGTCCCAAGGCCACTTGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318837.6
ENST00000369483.5
CDS CAA 72 bp CATTCCACCATGAGCTGGGAGGTTATGCTGGTGCGGTaGAGAACCACACACTCCAGCTGTACCTGCCGGGTC +
Preference number: 6 (lower is better)
Translates to: HSTMSWEVMLVR*RTTHSSCTCRV
Trigger: GACCCGGCAGGTACAGCTGGAGTGTGTGGTTCTCAACCGCACCAGCATAACCTCCCAGCTCATGGTGGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 72 bp GACTCTCCAAATGCAGCCGCCCCTTCAGATTGTTCTTaGCTGCCTGCTCTCCATAGTGGAAGGTGGCGTCAC +
Preference number: 6 (lower is better)
Translates to: DSPNAAAPSDCS*LPALHSGRWRH
Trigger: GTGACGCCACCTTCCACTATGGAGAGCAGGCAGCCAAGAACAATCTGAAGGGGCGGCTGCATTTGGAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CAA 90 bp CATACAAACCATTCCACCATGAGCTGGGAGGTTATGCTGGTGCGGTaGAGAACCACACACTCCAGCTGTACCTGCCGGGTCTCCAGAACC +
Preference number: 6 (lower is better)
Translates to: HTNHSTMSWEVMLVR*RTTHSSCTCRVSRT
Trigger: GGTTCTGGAGACCCGGCAGGTACAGCTGGAGTGTGTGGTTCTCAACCGCACCAGCATAACCTCCCAGCTCATGGTGGAATGGTTTGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 72 bp ATGCTGCTCTCCAAGTGGCCTTGGGACAGGAGCTGGTaGTGCTGGGGGACTTTAACTACCCAGTTATCTGTG +
Preference number: 6 (lower is better)
Translates to: MLLSKWPWDRSW*CWGTLTTQLSV
Trigger: CACAGATAACTGGGTAGTTAAAGTCCCCCAGCACCACCAGCTCCTGTCCCAAGGCCACTTGGAGAGCAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318837.6
ENST00000369483.5
CDS CCA 72 bp GAGATGCTGCTCTCCAAGTGGCCTTGGGACAGGAGCTaGTGGTGCTGGGGGACTTTAACTACCCAGTTATCT +
Preference number: 6 (lower is better)
Translates to: EMLLSKWPWDRS*WCWGTLTTQLS
Trigger: AGATAACTGGGTAGTTAAAGTCCCCCAGCACCACCAGCTCCTGTCCCAAGGCCACTTGGAGAGCAGCATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318837.6
ENST00000369483.5
CDS CAA 72 bp CACAGCAGAGGCACCCCATTCTTCCCATCAGAGTTCTaGCTGGAGTTCCGGCTCTTGAAACGCACCAGAAGG +
Preference number: 6 (lower is better)
Translates to: HSRGTPFFPSEF*LEFRLLKRTRR
Trigger: CCTTCTGGTGCGTTTCAAGAGCCGGAACTCCAGCAAGAACTCTGATGGGAAGAATGGGGTGCCTCTGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CAA 72 bp CGGAAGTCGCTCCCGGCTCCTGCCACATCGTGTGCCTaGCAGTTTCCACTGAAATTGCAGACTGTAGTGGAT +
Preference number: 6 (lower is better)
Translates to: RKSLPAPATSCA*QFPLKLQTVVD
Trigger: ATCCACTACAGTCTGCAATTTCAGTGGAAACTGCAAGGCACACGATGTGGCAGGAGCCGGGAGCGACTTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS TCA 72 bp CCCCAGAGAGAACAGGGCAGGTTTCGTCAAAACCTTTaGCGGCCAAATCACCCTGCCTGGCATCAACCGTTT +
Preference number: 6 (lower is better)
Translates to: PQREQGRFRQNL*RPNHPAWHQPF
Trigger: AAACGGTTGATGCCAGGCAGGGTGATTTGGCCGTCAAAGGTTTTGACGAAACCTGCCCTGTTCTCTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS GCA 72 bp AGGGTCCACAACAATTCGGAAGTCGCTCCCGGCTCCTaGCACATCGTGTGCCTTGCAGTTTCCACTGAAATT +
Preference number: 6 (lower is better)
Translates to: RVHNNSEVAPGS*HIVCLAVSTEI
Trigger: AATTTCAGTGGAAACTGCAAGGCACACGATGTGGCAGGAGCCGGGAGCGACTTCCGAATTGTTGTGGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS CAA 72 bp TCCCCAGAGAGAACAGGGCAGGTTTCGTCAAAACCTTaGACGGCCAAATCACCCTGCCTGGCATCAACCGTT +
Preference number: 6 (lower is better)
Translates to: SPERTGQVSSKP*TAKSPCLASTV
Trigger: AACGGTTGATGCCAGGCAGGGTGATTTGGCCGTCAAAGGTTTTGACGAAACCTGCCCTGTTCTCTCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS GCA 72 bp AATTCGGAAGTCGCTCCCGGCTCCTGCCACATCGTGTaGCTTGCAGTTTCCACTGAAATTGCAGACTGTAGT +
Preference number: 6 (lower is better)
Translates to: NSEVAPGSCHIV*LAVSTEIADCS
Trigger: ACTACAGTCTGCAATTTCAGTGGAAACTGCAAGGCACACGATGTGGCAGGAGCCGGGAGCGACTTCCGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS CAA 90 bp CATTCGGATTCCCCAGAGAGAACAGGGCAGGTTTCGTCAAAACCTTaGACGGCCAAATCACCCTGCCTGGCATCAACCGTTTGGGTTTCT +
Preference number: 6 (lower is better)
Translates to: HSDSPERTGQVSSKP*TAKSPCLASTVWVS
Trigger: AGAAACCCAAACGGTTGATGCCAGGCAGGGTGATTTGGCCGTCAAAGGTTTTGACGAAACCTGCCCTGTTCTCTCTGGGGAATCCGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS CAA 90 bp GGCACCCCATTCTTCCCATCAGAGTTCTTGCTGGAGTTCCGGCTCTaGAAACGCACCAGAAGGATGGTGATGATAAGAATGCCAAAGATG +
Preference number: 6 (lower is better)
Translates to: GTPFFPSEFLLEFRL*KRTRRMVMIRMPKM
Trigger: CATCTTTGGCATTCTTATCATCACCATCCTTCTGGTGCGTTTCAAGAGCCGGAACTCCAGCAAGAACTCTGATGGGAAGAATGGGGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CAA 90 bp GTCAAAACCTTTGACGGCCAAATCACCCTGCCTGGCATCAACCGTTaGGGTTTCTTCACCAAAAAGTCCGTTTCCATCCATGGTGGTAGG +
Preference number: 6 (lower is better)
Translates to: VKTFDGQITLPGINR*GFFTKKSVSIHGGR
Trigger: CCTACCACCATGGATGGAAACGGACTTTTTGGTGAAGAAACCCAAACGGTTGATGCCAGGCAGGGTGATTTGGCCGTCAAAGGTTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS TCA 72 bp AGAAGACGAAGTAGAAGAGTGCGTCGTTGGAGCAGATaGTGGACTGGAGGGTGGGACTTGTATCTAGAACAC +
Preference number: 6 (lower is better)
Translates to: RRRSRRVRRWSR*WTGGWDLYLEH
Trigger: GTGTTCTAGATACAAGTCCCACCCTCCAGTCCATCATCTGCTCCAACGACGCACTCTTCTACTTCGTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8
CDS CCA 72 bp TTGACGGCCAAATCACCCTGCCTGGCATCAACCGTTTaGGTTTCTTCACCAAAAAGTCCGTTTCCATCCATG +
Preference number: 6 (lower is better)
Translates to: LTAKSPCLASTV*VSSPKSPFPSM
Trigger: CATGGATGGAAACGGACTTTTTGGTGAAGAAACCCAAACGGTTGATGCCAGGCAGGGTGATTTGGCCGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS GCA 72 bp CAGGTTTCGTCAAAACCTTTGACGGCCAAATCACCCTaGCTGGCATCAACCGTTTGGGTTTCTTCACCAAAA +
Preference number: 6 (lower is better)
Translates to: QVSSKPLTAKSP*LASTVWVSSPK
Trigger: TTTTGGTGAAGAAACCCAAACGGTTGATGCCAGGCAGGGTGATTTGGCCGTCAAAGGTTTTGACGAAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS CAA 72 bp TTTGACGGCCAAATCACCCTGCCTGGCATCAACCGTTaGGGTTTCTTCACCAAAAAGTCCGTTTCCATCCAT +
Preference number: 6 (lower is better)
Translates to: FDGQITLPGINR*GFFTKKSVSIH
Trigger: ATGGATGGAAACGGACTTTTTGGTGAAGAAACCCAAACGGTTGATGCCAGGCAGGGTGATTTGGCCGTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369483.5
ENST00000369486.8
CDS CAA 72 bp TTCTTCCCATCAGAGTTCTTGCTGGAGTTCCGGCTCTaGAAACGCACCAGAAGGATGGTGATGATAAGAATG +
Preference number: 6 (lower is better)
Translates to: FFPSEFLLEFRL*KRTRRMVMIRM
Trigger: CATTCTTATCATCACCATCCTTCTGGTGCGTTTCAAGAGCCGGAACTCCAGCAAGAACTCTGATGGGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318837.6
ENST00000369483.5
ENST00000369486.8