RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGSF23 (Homo sapiens)

Ensembl gene IDs: ENSG00000216588

Ensembl transcript IDs: ENST00000402988.6, ENST00000428245.5, ENST00000441389.1, ENST00000592507.1

Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCTGTTTTCTGAGCACTGAGCTCCCACAGACAGGGATGAGCCTCTaGTGCTTTGCTTGCACAACGTGTCACGGCGATGGGACCAAGGAT +
Preference number: 1 (lower is better)
Translates to: PCFLSTELPQTGMSL*CFACTTCHGDGTKD
Trigger: ATCCTTGGTCCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAGAGGCTCATCCCTGTCTGTGGGAGCTCAGTGCTCAGAAAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
3UTR CCA 90 bp AGGGATGAGCCTCTGATGCTTTGCTTGCACAACGTGTCACGGCGATaGGACCAAGGATGGCACCGAGTCAACCCATCAGATGTTTTCTTC +
Preference number: 1 (lower is better)
Translates to: RDEPLMLCLHNVSRR*DQGWHRVNPSDVFF
Trigger: GAAGAAAACATCTGATGGGTTGACTCGGTGCCATCCTTGGTCCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAGAGGCTCATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
3UTR CCA 90 bp CTGATGCTTTGCTTGCACAACGTGTCACGGCGATGGGACCAAGGATaGCACCGAGTCAACCCATCAGATGTTTTCTTCAGGTGTTTCAGA +
Preference number: 1 (lower is better)
Translates to: LMLCLHNVSRRWDQG*HRVNPSDVFFRCFR
Trigger: TCTGAAACACCTGAAGAAAACATCTGATGGGTTGACTCGGTGCCATCCTTGGTCCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
3UTR CCA 90 bp TTCTTCAGGTGTTTCAGAAACAGGGCAAAGGGAGTCTGGTTACGTTaGGTTGTTCCCTTGAACAGAGATGTTGTAGACTTGGAAGCTATG +
Preference number: 1 (lower is better)
Translates to: FFRCFRNRAKGVWLR*VVPLNRDVVDLEAM
Trigger: CATAGCTTCCAAGTCTACAACATCTCTGTTCAAGGGAACAACCCAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACACCTGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
3UTR CCA 90 bp TCAGATGTTTTCTTCAGGTGTTTCAGAAACAGGGCAAAGGGAGTCTaGTTACGTTGGGTTGTTCCCTTGAACAGAGATGTTGTAGACTTG +
Preference number: 1 (lower is better)
Translates to: SDVFFRCFRNRAKGV*LRWVVPLNRDVVDL
Trigger: CAAGTCTACAACATCTCTGTTCAAGGGAACAACCCAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACACCTGAAGAAAACATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
3UTR CAA 90 bp TTTCTTCAGGTGTTTCAGAAACAGGGCAAAGGGAGTCTGGTTACGTaGGGTTGTTCCCTTGAACAGAGATGTTGTAGACTTGGAAGCTAT +
Preference number: 2 (lower is better)
Translates to: FLQVFQKQGKGSLVT*GCSLEQRCCRLGSY
Trigger: ATAGCTTCCAAGTCTACAACATCTCTGTTCAAGGGAACAACCCAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACACCTGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
3UTR TCA 72 bp CTGAGCACTGAGCTCCCACAGACAGGGATGAGCCTCTaGTGCTTTGCTTGCACAACGTGTCACGGCGATGGG +
Preference number: 3 (lower is better)
Translates to: LSTELPQTGMSL*CFACTTCHGDG
Trigger: CCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAGAGGCTCATCCCTGTCTGTGGGAGCTCAGTGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
3UTR CCA 72 bp CCTCTGATGCTTTGCTTGCACAACGTGTCACGGCGATaGGACCAAGGATGGCACCGAGTCAACCCATCAGAT +
Preference number: 3 (lower is better)
Translates to: PLMLCLHNVSRR*DQGWHRVNPSD
Trigger: ATCTGATGGGTTGACTCGGTGCCATCCTTGGTCCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
3UTR CCA 72 bp TGTTTCAGAAACAGGGCAAAGGGAGTCTGGTTACGTTaGGTTGTTCCCTTGAACAGAGATGTTGTAGACTTG +
Preference number: 3 (lower is better)
Translates to: CFRNRAKGVWLR*VVPLNRDVVDL
Trigger: CAAGTCTACAACATCTCTGTTCAAGGGAACAACCCAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
3UTR CCA 72 bp TTCTTCAGGTGTTTCAGAAACAGGGCAAAGGGAGTCTaGTTACGTTGGGTTGTTCCCTTGAACAGAGATGTT +
Preference number: 3 (lower is better)
Translates to: FFRCFRNRAKGV*LRWVVPLNRDV
Trigger: AACATCTCTGTTCAAGGGAACAACCCAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACACCTGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
3UTR-3UTR CAA 90 bp AGATGTTTTCTTCAGGTGTTTCAGAAACAGGGCAAAGGGAGTCTGGTTACGTTGAGAGATGTTGTAGACTaGGAAGCTATGGGATGGGTT +
Preference number: 3 (lower is better)
Translates to: RCFLQVFQKQGKGSLVTLRDVVD*EAMGWV
Trigger: AACCCATCCCATAGCTTCCAAGTCTACAACATCTCT...CAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACACCTGAAGAAAACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR TCA 90 bp CCTCTGATGCTTTGCTTGCACAACGTGTCACGGCGATGGGACCAAGGATGGCACGATGGCAGAGCCTCCTaGCAGGGACAGAGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PLMLCLHNVSRRWDQGWHDGRAS*QGQSGV
Trigger: GACCCCACTCTGTCCCTGTCAGGAGGCTCTGCCATC...GTGCCATCCTTGGTCCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR GCA 90 bp CCTCTGATGCTTTGCTTGCACAACGTGTCACGGCGATGGGACCAAGGATGGCACCATGCCTGCAATCAGTaGCCCGGCTCCCAGGATCCC +
Preference number: 4 (lower is better)
Translates to: PLMLCLHNVSRRWDQGWHHACNQ*PGSQDP
Trigger: GGGATCCTGGGAGCCGGGGCACTGATTGCAGGCATG...GTGCCATCCTTGGTCCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CCA 90 bp GCCTCTGATGCTTTGCTTGCACAACGTGTCACGGCGATGGGACCAAGGATGGCACTAGCATCGGGTCAGTaGTGGTGGTGGGTGGGGACC +
Preference number: 4 (lower is better)
Translates to: ASDALLAQRVTAMGPRMALASGQ*WWWVGT
Trigger: GGTCCCCACCCACCACCACCACTGACCCGATGCTAG...TGCCATCCTTGGTCCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CCA 90 bp CCCACAGACAGGGATGAGCCTCTGATGCTTTGCTTGCACAACGTGTCACGGCGAGGACAGAGTGGGGTCTaGCTCCATGGGCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PTDRDEPLMLCLHNVSRRGQSGV*LHGLCF
Trigger: GAAGCAGAGCCCATGGAGCCAGACCCCACTCTGTCC...TCGCCGTGACACGTTGTGCAAGCAAAGCATCAGAGGCTCATCCCTGTCTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR TCA 90 bp TCTGATGCTTTGCTTGCACAACGTGTCACGGCGATGGGACCAAGGATGGCACCGCTTCTGTGGGCTGCATaGTGGGTTTTGGCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: SDALLAQRVTAMGPRMAPLLWAA*WVLAAR
Trigger: TCTCGCTGCCAAAACCCATCATGCAGCCCACAGAAG...CGGTGCCATCCTTGGTCCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR TCA 90 bp TCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGTTCACAGGGCACCCCACTaGAGGTCCAGCTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: STWIERYKAPISSADRRVHRAPH*RSSSAQ
Trigger: CTGTGCTGAGCTGGACCTTCAGTGGGGTGCCCTGTG...AACTCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR TCA 90 bp TCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGTTGATGGCAGAGCCTCCTaGCAGGGACAGAGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: STWIERYKAPISSADRRVDGRAS*QGQSGV
Trigger: GACCCCACTCTGTCCCTGTCAGGAGGCTCTGCCATC...AACTCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR TCA 90 bp CCTCTGATGCTTTGCTTGCACAACGTGTCACGGCGATGGGACCAAGGATGGCACACCCATCTCTTCAGCTaGCAGGAGAGTTGCCCACAT +
Preference number: 4 (lower is better)
Translates to: PLMLCLHNVSRRWDQGWHTHLFS*QESCPH
Trigger: ATGTGGGCAACTCTCCTGTCAGCTGAAGAGATGGGT...GTGCCATCCTTGGTCCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR TCA 90 bp TCTGATGCTTTGCTTGCACAACGTGTCACGGCGATGGGACCAAGGATGGCACCGTCCCACAGACAGGGATaGGCCTCTGATGCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: SDALLAQRVTAMGPRMAPSHRQG*ASDALL
Trigger: AAGCAAAGCATCAGAGGCTCATCCCTGTCTGTGGGA...CGGTGCCATCCTTGGTCCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR GCA 90 bp TCTGATGCTTTGCTTGCACAACGTGTCACGGCGATGGGACCAAGGATGGCACCGCTATGCACATGTAGGTaGCCAGCTGCTCACAGGACA +
Preference number: 4 (lower is better)
Translates to: SDALLAQRVTAMGPRMAPLCTCR*PAAHRT
Trigger: TGTCCTGTGAGCAGCTGGGCACCTACATGTGCATAG...CGGTGCCATCCTTGGTCCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR GCA 90 bp CCTCTGATGCTTTGCTTGCACAACGTGTCACGGCGATGGGACCAAGGATGGCACTCTGCTTCTGTGGGCTaGATGATGGGTTTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PLMLCLHNVSRRWDQGWHSASVG*MMGFGS
Trigger: GCTGCCAAAACCCATCATGCAGCCCACAGAAGCAGA...GTGCCATCCTTGGTCCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR GCA 90 bp TCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGTTCATGCCTGCAATCAGTaGCCCGGCTCCCAGGATCCC +
Preference number: 4 (lower is better)
Translates to: STWIERYKAPISSADRRVHACNQ*PGSQDP
Trigger: GGGATCCTGGGAGCCGGGGCACTGATTGCAGGCATG...AACTCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR CCA 90 bp GTGTTTCAGAAACAGGGCAAAGGGAGTCTGGTTACGTTGGGTTGTTCCCTTGAAGGGTGGGGACCAGGCTaGGACAGGGTTCCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: VFQKQGKGSLVTLGCSLEGWGPG*DRVPGK
Trigger: CTTCCCAGGAACCCTGTCCCAGCCTGGTCCCCACCC...TTCAAGGGAACAACCCAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CCA 90 bp TTTTCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGACCGCAAGGAGCCCGATaGCAGAGCCTCCTGACAGGG +
Preference number: 4 (lower is better)
Translates to: FSTWIERYKAPISSADRRPQGAR*QSLLTG
Trigger: CCCTGTCAGGAGGCTCTGCCATCGGGCTCCTTGCGG...TCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR TCA 90 bp GTGTTTCAGAAACAGGGCAAAGGGAGTCTGGTTACGTTGGGTTGTTCCCTTGAACACAGGGCACCCCACTaGAGGTCCAGCTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: VFQKQGKGSLVTLGCSLEHRAPH*RSSSAQ
Trigger: CTGTGCTGAGCTGGACCTTCAGTGGGGTGCCCTGTG...TTCAAGGGAACAACCCAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR GCA 90 bp GCCTCTGATGCTTTGCTTGCACAACGTGTCACGGCGATGGGACCAAGGATGGCAGGGGCTCTGAGGTTTTaGTCTCATTCTCTCACCGTA +
Preference number: 4 (lower is better)
Translates to: ASDALLAQRVTAMGPRMAGALRF*SHSLTV
Trigger: TACGGTGAGAGAATGAGAGCAAAACCTCAGAGCCCC...TGCCATCCTTGGTCCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR GCA 90 bp CCCACAGACAGGGATGAGCCTCTGATGCTTTGCTTGCACAACGTGTCACGGCGATGCTGTTTGTGGCTATaGACATGTAGGTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PTDRDEPLMLCLHNVSRRCCLWL*TCRCPA
Trigger: AGCTGGGCACCTACATGTGCATAGCCACAAACAGCA...TCGCCGTGACACGTTGTGCAAGCAAAGCATCAGAGGCTCATCCCTGTCTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CCA 90 bp GACAGGGATGAGCCTCTGATGCTTTGCTTGCACAACGTGTCACGGCGATGGGACGTTTTGGCAGCGAGATaGTTACAGGCTCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: DRDEPLMLCLHNVSRRWDVLAAR*LQAQRP
Trigger: TGGTCTCTGAGCCTGTAACCATCTCGCTGCCAAAAC...GTCCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAGAGGCTCATCCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CCA 90 bp CCCACAGACAGGGATGAGCCTCTGATGCTTTGCTTGCACAACGTGTCACGGCGACTGCATGATGGGTTTTaGCAGCGAGATGGTTACAGG +
Preference number: 4 (lower is better)
Translates to: PTDRDEPLMLCLHNVSRRLHDGF*QRDGYR
Trigger: CCTGTAACCATCTCGCTGCCAAAACCCATCATGCAG...TCGCCGTGACACGTTGTGCAAGCAAAGCATCAGAGGCTCATCCCTGTCTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CCA 90 bp TCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGTTGGACAGAGTGGGGTCTaGCTCCATGGGCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: STWIERYKAPISSADRRVGQSGV*LHGLCF
Trigger: GAAGCAGAGCCCATGGAGCCAGACCCCACTCTGTCC...AACTCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR CCA 90 bp CAACCCATCAGATGTTTTCTTCAGGTGTTTCAGAAACAGGGCAAAGGGAGTCTGCCGCAAGGAGCCCGATaGCAGAGCCTCCTGACAGGG +
Preference number: 4 (lower is better)
Translates to: QPIRCFLQVFQKQGKGSLPQGAR*QSLLTG
Trigger: CCCTGTCAGGAGGCTCTGCCATCGGGCTCCTTGCGG...CAGACTCCCTTTGCCCTGTTTCTGAAACACCTGAAGAAAACATCTGATGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CCA 90 bp TCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGTTCTCCAGGTAGGGGTGTaGCTGGAGCTGACGTCCAGA +
Preference number: 4 (lower is better)
Translates to: STWIERYKAPISSADRRVLQVGV*LELTSR
Trigger: TCTGGACGTCAGCTCCAGCCACACCCCTACCTGGAG...AACTCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428245.5
CDS-3UTR CCA 90 bp TGTTTCAGAAACAGGGCAAAGGGAGTCTGGTTACGTTGGGTTGTTCCCTTGAACATCCCCGCCGGGAGATaGAGGGAGAAGCAGAATCGC +
Preference number: 4 (lower is better)
Translates to: CFRNRAKGVWLRWVVPLNIPAGR*REKQNR
Trigger: GCGATTCTGCTTCTCCCTCCATCTCCCGGCGGGGAT...GTTCAAGGGAACAACCCAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CCA 90 bp GTGTTTCAGAAACAGGGCAAAGGGAGTCTGGTTACGTTGGGTTGTTCCCTTGAAGAGGACCAAGTTGGCTaGGAAGTCACCTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: VFQKQGKGSLVTLGCSLEEDQVG*EVTSSR
Trigger: GCGGCTGGAGGTGACTTCCCAGCCAACTTGGTCCTC...TTCAAGGGAACAACCCAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CCA 90 bp TTTTCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGACTGACAGGGACAGAGTaGGGTCTGGCTCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: FSTWIERYKAPISSADRRLTGTE*GLAPWA
Trigger: AGCCCATGGAGCCAGACCCCACTCTGTCCCTGTCAG...TCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR TCA 90 bp TCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGTTCTTCTGTGGGCTGCATaGTGGGTTTTGGCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: STWIERYKAPISSADRRVLLWAA*WVLAAR
Trigger: TCTCGCTGCCAAAACCCATCATGCAGCCCACAGAAG...AACTCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR TCA 90 bp TCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGTTAGCAGGTGCAGGATGTaGGCAGGGCGCCTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: STWIERYKAPISSADRRVSRCRM*AGRLLK
Trigger: TTTTAACAGGCGCCCTGCTCACATCCTGCACCTGCT...AACTCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428245.5
CDS-3UTR GCA 90 bp TCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGTTTGGCTCCATGGGCTCTaGTTCTGTGGGCTGCATGAT +
Preference number: 4 (lower is better)
Translates to: STWIERYKAPISSADRRVWLHGL*FCGLHD
Trigger: ATCATGCAGCCCACAGAAGCAGAGCCCATGGAGCCA...AACTCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR GCA 90 bp TCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGTTGATGAAACACATGCCTaGAATCAGTGCCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: STWIERYKAPISSADRRVDETHA*NQCPGS
Trigger: GGAGCCGGGGCACTGATTGCAGGCATGTGTTTCATC...AACTCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR GCA 90 bp TCTGATGCTTTGCTTGCACAACGTGTCACGGCGATGGGACCAAGGATGGCACCGCATATTCCTATTCTCTaGCTGTCAGTCCTTAGGCTC +
Preference number: 4 (lower is better)
Translates to: SDALLAQRVTAMGPRMAPHIPIL*LSVLRL
Trigger: GAGCCTAAGGACTGACAGGCAGAGAATAGGAATATG...CGGTGCCATCCTTGGTCCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CCA 90 bp CAACCCATCAGATGTTTTCTTCAGGTGTTTCAGAAACAGGGCAAAGGGAGTCTGCTGACAGGGACAGAGTaGGGTCTGGCTCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: QPIRCFLQVFQKQGKGSLLTGTE*GLAPWA
Trigger: AGCCCATGGAGCCAGACCCCACTCTGTCCCTGTCAG...CAGACTCCCTTTGCCCTGTTTCTGAAACACCTGAAGAAAACATCTGATGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR TCA 90 bp GTGTTTCAGAAACAGGGCAAAGGGAGTCTGGTTACGTTGGGTTGTTCCCTTGAACTGGGAAGGGGGCTCTaGGGTTTTGCTCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: VFQKQGKGSLVTLGCSLELGRGL*GFALIL
Trigger: GAGAATGAGAGCAAAACCTCAGAGCCCCCTTCCCAG...TTCAAGGGAACAACCCAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR TCA 90 bp TTTTCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAAGGACAACCGTCGGATaGACAGCTTCTCTCCCATCC +
Preference number: 4 (lower is better)
Translates to: FSTWIERYKAPISSADRRRTTVG*TASLPS
Trigger: GGATGGGAGAGAAGCTGTTCATCCGACGGTTGTCCT...TCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR TCA 90 bp TCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGTTACCCATCTCTTCAGCTaGCAGGAGAGTTGCCCACAT +
Preference number: 4 (lower is better)
Translates to: STWIERYKAPISSADRRVTHLFS*QESCPH
Trigger: ATGTGGGCAACTCTCCTGTCAGCTGAAGAGATGGGT...AACTCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR TCA 90 bp TCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGTTCTGTTTTCTGAGCACTaGGCTCCCACAGACAGGGAT +
Preference number: 4 (lower is better)
Translates to: STWIERYKAPISSADRRVLFSEH*APTDRD
Trigger: ATCCCTGTCTGTGGGAGCTCAGTGCTCAGAAAACAG...AACTCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR GCA 90 bp GTGTTTCAGAAACAGGGCAAAGGGAGTCTGGTTACGTTGGGTTGTTCCCTTGAAGATGAAACACATGCCTaGAATCAGTGCCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: VFQKQGKGSLVTLGCSLEDETHA*NQCPGS
Trigger: GGAGCCGGGGCACTGATTGCAGGCATGTGTTTCATC...TTCAAGGGAACAACCCAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CCA 90 bp AGATGTTTTCTTCAGGTGTTTCAGAAACAGGGCAAAGGGAGTCTGGTTACGTTGCTGGGACAGGGTTCCTaGGAAGGGGGCTCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: RCFLQVFQKQGKGSLVTLLGQGS*EGGSEV
Trigger: AACCTCAGAGCCCCCTTCCCAGGAACCCTGTCCCAG...CAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACACCTGAAGAAAACATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CCA 90 bp TTTTCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGTTGGAGGACCAAGTTaGCTGGGAAGTCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: FSTWIERYKAPISSADRRVGGPS*LGSHLQ
Trigger: CTGGAGGTGACTTCCCAGCCAACTTGGTCCTCCAAC...TCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CCA 90 bp TCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGTTTCCCCGGATAGCAGCTaGGAATGTCTTCAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: STWIERYKAPISSADRRVSPDSS*ECLQWH
Trigger: ATGCCACTGAAGACATTCCCAGCTGCTATCCGGGGA...AACTCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR TCA 90 bp GTGTTTCAGAAACAGGGCAAAGGGAGTCTGGTTACGTTGGGTTGTTCCCTTGAAACAGGGATGAGCCTCTaGTGCTTTGCTTGCACAACG +
Preference number: 4 (lower is better)
Translates to: VFQKQGKGSLVTLGCSLETGMSL*CFACTT
Trigger: CGTTGTGCAAGCAAAGCATCAGAGGCTCATCCCTGT...TTCAAGGGAACAACCCAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR GCA 90 bp TTTTCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGACTATGCACATGTAGGTaGCCAGCTGCTCACAGGACA +
Preference number: 4 (lower is better)
Translates to: FSTWIERYKAPISSADRRLCTCR*PAAHRT
Trigger: TGTCCTGTGAGCAGCTGGGCACCTACATGTGCATAG...TCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR GCA 90 bp TTTTCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGATCTGCTTCTGTGGGCTaGATGATGGGTTTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: FSTWIERYKAPISSADRRSASVG*MMGFGS
Trigger: GCTGCCAAAACCCATCATGCAGCCCACAGAAGCAGA...TCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR GCA 90 bp TTTTCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGAGCCTCTGATGCTTTaGTTGCACAACGTGTCACGG +
Preference number: 4 (lower is better)
Translates to: FSTWIERYKAPISSADRREPLML*LHNVSR
Trigger: CCGTGACACGTTGTGCAAGCAAAGCATCAGAGGCTC...TCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CCA 90 bp TGTTTCAGAAACAGGGCAAAGGGAGTCTGGTTACGTTGGGTTGTTCCCTTGAACTCCCCGGATAGCAGCTaGGAATGTCTTCAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: CFRNRAKGVWLRWVVPLNSPDSS*ECLQWH
Trigger: ATGCCACTGAAGACATTCCCAGCTGCTATCCGGGGA...GTTCAAGGGAACAACCCAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CCA 90 bp TCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGTTGTTTTGGCAGCGAGATaGTTACAGGCTCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: STWIERYKAPISSADRRVVLAAR*LQAQRP
Trigger: TGGTCTCTGAGCCTGTAACCATCTCGCTGCCAAAAC...AACTCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR CCA 90 bp TCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGTTCTGCATGATGGGTTTTaGCAGCGAGATGGTTACAGG +
Preference number: 4 (lower is better)
Translates to: STWIERYKAPISSADRRVLHDGF*QRDGYR
Trigger: CCTGTAACCATCTCGCTGCCAAAACCCATCATGCAG...AACTCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR CCA 90 bp TTTTCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGACAGGAAGATGGACACTaGCTCCTTCGGTCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: FSTWIERYKAPISSADRRQEDGH*LLRSRC
Trigger: ACACCTTGACCGAAGGAGCCAGTGTCCATCTTCCTG...TCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428245.5
CDS-3UTR TCA 90 bp AGATGTTTTCTTCAGGTGTTTCAGAAACAGGGCAAAGGGAGTCTGGTTACGTTGAGGACAACCGTCGGATaGACAGCTTCTCTCCCATCC +
Preference number: 4 (lower is better)
Translates to: RCFLQVFQKQGKGSLVTLRTTVG*TASLPS
Trigger: GGATGGGAGAGAAGCTGTTCATCCGACGGTTGTCCT...CAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACACCTGAAGAAAACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR GCA 90 bp TTTTCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGATGCTGTTTGTGGCTATaGACATGTAGGTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: FSTWIERYKAPISSADRRCCLWL*TCRCPA
Trigger: AGCTGGGCACCTACATGTGCATAGCCACAAACAGCA...TCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR GCA 90 bp AGATGTTTTCTTCAGGTGTTTCAGAAACAGGGCAAAGGGAGTCTGGTTACGTTGTGGCTCCATGGGCTCTaGTTCTGTGGGCTGCATGAT +
Preference number: 4 (lower is better)
Translates to: RCFLQVFQKQGKGSLVTLWLHGL*FCGLHD
Trigger: ATCATGCAGCCCACAGAAGCAGAGCCCATGGAGCCA...CAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACACCTGAAGAAAACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CCA 90 bp CCCACAGACAGGGATGAGCCTCTGATGCTTTGCTTGCACAACGTGTCACGGCGAACATATTTTGGGGTCTaGCCAATTTCCAAGGTAAAA +
Preference number: 4 (lower is better)
Translates to: PTDRDEPLMLCLHNVSRRTYFGV*PISKVK
Trigger: TTTTACCTTGGAAATTGGCCAGACCCCAAAATATGT...TCGCCGTGACACGTTGTGCAAGCAAAGCATCAGAGGCTCATCCCTGTCTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402988.6
3UTR CAA 72 bp AGGGCAAAGGGAGTCTGGTTACGTTGGGTTGTTCCCTaGAACAGAGATGTTGTAGACTTGGAAGCTATGGGA +
Preference number: 4 (lower is better)
Translates to: RAKGVWLRWVVP*NRDVVDLEAMG
Trigger: TCCCATAGCTTCCAAGTCTACAACATCTCTGTTCAAGGGAACAACCCAACGTAACCAGACTCCCTTTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR GCA 90 bp TCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGTTAGACCAGCTGTTTCTTaGTGTTTGTGGCTATGCACA +
Preference number: 4 (lower is better)
Translates to: STWIERYKAPISSADRRVRPAVS*CLWLCT
Trigger: TGTGCATAGCCACAAACAGCAAGAAACAGCTGGTCT...AACTCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR GCA 90 bp TCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGTTTGCCCACATTTCAGCTaGATATTCCTATTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: STWIERYKAPISSADRRVCPHFS*IFLFSA
Trigger: GGCAGAGAATAGGAATATGCAGCTGAAATGTGGGCA...AACTCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR GCA 90 bp GTGTTTCAGAAACAGGGCAAAGGGAGTCTGGTTACGTTGGGTTGTTCCCTTGAAAGACCAGCTGTTTCTTaGTGTTTGTGGCTATGCACA +
Preference number: 4 (lower is better)
Translates to: VFQKQGKGSLVTLGCSLERPAVS*CLWLCT
Trigger: TGTGCATAGCCACAAACAGCAAGAAACAGCTGGTCT...TTCAAGGGAACAACCCAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR GCA 90 bp TTTTCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGACATATTCCTATTCTCTaGCTGTCAGTCCTTAGGCTC +
Preference number: 4 (lower is better)
Translates to: FSTWIERYKAPISSADRRHIPIL*LSVLRL
Trigger: GAGCCTAAGGACTGACAGGCAGAGAATAGGAATATG...TCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR CCA 90 bp TTTTCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGTTTCTTGCTGTTTGTaGCTATGCACATGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: FSTWIERYKAPISSADRRVSCCL*LCTCRC
Trigger: GCACCTACATGTGCATAGCCACAAACAGCAAGAAAC...TCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR CCA 90 bp TTTTCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGATTCAGTGGCATTAGTTaGAGGCTGTCTTCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: FSTWIERYKAPISSADRRFSGIS*RLSSSL
Trigger: AAGGCTTGAAGACAGCCTCCAACTAATGCCACTGAA...TCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428245.5
CDS-3UTR GCA 90 bp CAACCCATCAGATGTTTTCTTCAGGTGTTTCAGAAACAGGGCAAAGGGAGTCTGTGCCCACATTTCAGCTaGATATTCCTATTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: QPIRCFLQVFQKQGKGSLCPHFS*IFLFSA
Trigger: GGCAGAGAATAGGAATATGCAGCTGAAATGTGGGCA...CAGACTCCCTTTGCCCTGTTTCTGAAACACCTGAAGAAAACATCTGATGGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CCA 90 bp TGTTTCAGAAACAGGGCAAAGGGAGTCTGGTTACGTTGGGTTGTTCCCTTGAACTCAGTCCTTAGGCTCTaGATGATGATGAAACACATG +
Preference number: 4 (lower is better)
Translates to: CFRNRAKGVWLRWVVPLNSVLRL*MMMKHM
Trigger: CATGTGTTTCATCATCATCCAGAGCCTAAGGACTGA...GTTCAAGGGAACAACCCAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CCA 90 bp TTTTCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGATCAGTCCTTAGGCTCTaGATGATGATGAAACACATG +
Preference number: 4 (lower is better)
Translates to: FSTWIERYKAPISSADRRSVLRL*MMMKHM
Trigger: CATGTGTTTCATCATCATCCAGAGCCTAAGGACTGA...TCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
3UTR CAA 72 bp GTGTTTCAGAAACAGGGCAAAGGGAGTCTGGTTACGTaGGGTTGTTCCCTTGAACAGAGATGTTGTAGACTT +
Preference number: 4 (lower is better)
Translates to: VFQKQGKGSLVT*GCSLEQRCCRL
Trigger: AAGTCTACAACATCTCTGTTCAAGGGAACAACCCAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CCA 90 bp CAACCCATCAGATGTTTTCTTCAGGTGTTTCAGAAACAGGGCAAAGGGAGTCTGGTAAAAGACATATTTTaGGGTCTGGCCAATTTCCAA +
Preference number: 4 (lower is better)
Translates to: QPIRCFLQVFQKQGKGSLVKDIF*GLANFQ
Trigger: TTGGAAATTGGCCAGACCCCAAAATATGTCTTTTAC...CAGACTCCCTTTGCCCTGTTTCTGAAACACCTGAAGAAAACATCTGATGGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS CCA 90 bp CAATCAGTGCCCCGGCTCCCAGGATCCCAGCCGCAAGGAGCCCGATaGCAGAGCCTCCTGACAGGGACAGAGTGGGGTCTGGCTCCATGG +
Preference number: 5 (lower is better)
Translates to: QSVPRLPGSQPQGAR*QSLLTGTEWGLAPW
Trigger: CCATGGAGCCAGACCCCACTCTGTCCCTGTCAGGAGGCTCTGCCATCGGGCTCCTTGCGGCTGGGATCCTGGGAGCCGGGGCACTGATTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402988.6
ENST00000428245.5
ENST00000441389.1
CDS CCA 90 bp GTTGGAGGCTGTCTTCAAGCCTTCCGGGGACAGGAAGATGGACACTaGCTCCTTCGGTCAAGGTGTTCAGCTGTGCCGAGAAGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: VGGCLQAFRGQEDGH*LLRSRCSAVPRRAA
Trigger: AGCTGCCCTTCTCGGCACAGCTGAACACCTTGACCGAAGGAGCCAGTGTCCATCTTCCTGTCCCCGGAAGGCTTGAAGACAGCCTCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428245.5
CDS-3UTR CAA 90 bp CCTCTGATGCTTTGCTTGCACAACGTGTCACGGCGATGGGACCAAGGATGGCACCAGGCTCAGGGTCCATaGTCACCACCCACTGCAGGA +
Preference number: 5 (lower is better)
Translates to: PLMLCLHNVSRRWDQGWHQAQGP*SPPTAG
Trigger: TCCTGCAGTGGGTGGTGACAATGGACCCTGAGCCTG...GTGCCATCCTTGGTCCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS CCA 90 bp GGCATTAGTTGGAGGCTGTCTTCAAGCCTTCCGGGGACAGGAAGATaGACACTGGCTCCTTCGGTCAAGGTGTTCAGCTGTGCCGAGAAG +
Preference number: 5 (lower is better)
Translates to: GISWRLSSSLPGTGR*TLAPSVKVFSCAEK
Trigger: CTTCTCGGCACAGCTGAACACCTTGACCGAAGGAGCCAGTGTCCATCTTCCTGTCCCCGGAAGGCTTGAAGACAGCCTCCAACTAATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428245.5
CDS-3UTR CAA 90 bp GACAGGGATGAGCCTCTGATGCTTTGCTTGCACAACGTGTCACGGCGATGGGACGGGGGCTCTGAGGTTTaGCTCTCATTCTCTCACCGT +
Preference number: 5 (lower is better)
Translates to: DRDEPLMLCLHNVSRRWDGGSEV*LSFSHR
Trigger: ACGGTGAGAGAATGAGAGCAAAACCTCAGAGCCCCC...GTCCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAGAGGCTCATCCCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS GCA 90 bp CTGACGTCCAGAGGACCCCTCATCTCGTGTTCTGTCCAGGGACTGTaGAGAGAAGGTCTCCTCATCACACATGGGGTCTTCATAGACCTG +
Preference number: 5 (lower is better)
Translates to: LTSRGPLISCSVQGL*REGLLITHGVFIDL
Trigger: CAGGTCTATGAAGACCCCATGTGTGATGAGGAGACCTTCTCTGCACAGTCCCTGGACAGAACACGAGATGAGGGGTCCTCTGGACGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592507.1
CDS CCA 90 bp GAGGTTTTGCTCTCATTCTCTCACCGTACAATCCCCGCCGGGAGATaGAGGGAGAAGCAGAATCGCCCGCTCCTATCACTCACATCAAAG +
Preference number: 5 (lower is better)
Translates to: EVLLSFSHRTIPAGR*REKQNRPLLSLTSK
Trigger: CTTTGATGTGAGTGATAGGAGCGGGCGATTCTGCTTCTCCCTCCATCTCCCGGCGGGGATTGTACGGTGAGAGAATGAGAGCAAAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS CCA 90 bp GCGAGATGGTTACAGGCTCAGAGACCAGCTGTTTCTTGCTGTTTGTaGCTATGCACATGTAGGTGCCCAGCTGCTCACAGGACAACCGTC +
Preference number: 5 (lower is better)
Translates to: ARWLQAQRPAVSCCL*LCTCRCPAAHRTTV
Trigger: GACGGTTGTCCTGTGAGCAGCTGGGCACCTACATGTGCATAGCCACAAACAGCAAGAAACAGCTGGTCTCTGAGCCTGTAACCATCTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402988.6
ENST00000428245.5
ENST00000441389.1
CDS-3UTR CAA 90 bp TCTGATGCTTTGCTTGCACAACGTGTCACGGCGATGGGACCAAGGATGGCACCGGAGACCAGCTGTTTCTaGCTGTTTGTGGCTATGCAC +
Preference number: 5 (lower is better)
Translates to: SDALLAQRVTAMGPRMAPETSCF*LFVAMH
Trigger: GTGCATAGCCACAAACAGCAAGAAACAGCTGGTCTC...CGGTGCCATCCTTGGTCCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS GCA 90 bp GTTTTGGCAGCGAGATGGTTACAGGCTCAGAGACCAGCTGTTTCTTaGTGTTTGTGGCTATGCACATGTAGGTGCCCAGCTGCTCACAGG +
Preference number: 5 (lower is better)
Translates to: VLAARWLQAQRPAVS*CLWLCTCRCPAAHR
Trigger: CCTGTGAGCAGCTGGGCACCTACATGTGCATAGCCACAAACAGCAAGAAACAGCTGGTCTCTGAGCCTGTAACCATCTCGCTGCCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402988.6
ENST00000428245.5
ENST00000441389.1
CDS-3UTR CAA 90 bp TTTTCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGACAGGCTCAGGGTCCATaGTCACCACCCACTGCAGGA +
Preference number: 5 (lower is better)
Translates to: FSTWIERYKAPISSADRRQAQGP*SPPTAG
Trigger: TCCTGCAGTGGGTGGTGACAATGGACCCTGAGCCTG...TCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR CAA 90 bp TCTGATGCTTTGCTTGCACAACGTGTCACGGCGATGGGACCAAGGATGGCACCGGCTGTTTCTTGCTGTTaGTGGCTATGCACATGTAGG +
Preference number: 5 (lower is better)
Translates to: SDALLAQRVTAMGPRMAPAVSCC*WLCTCR
Trigger: CCTACATGTGCATAGCCACAAACAGCAAGAAACAGC...CGGTGCCATCCTTGGTCCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CAA 90 bp CCCACAGACAGGGATGAGCCTCTGATGCTTTGCTTGCACAACGTGTCACGGCGAAGAGATGTTGTAGACTaGGAAGCTATGGGATGGGTT +
Preference number: 5 (lower is better)
Translates to: PTDRDEPLMLCLHNVSRRRDVVD*EAMGWV
Trigger: AACCCATCCCATAGCTTCCAAGTCTACAACATCTCT...TCGCCGTGACACGTTGTGCAAGCAAAGCATCAGAGGCTCATCCCTGTCTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CAA 90 bp TCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGTTCAGCTGACAGGAGAGTaGCCCACATTTCAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: STWIERYKAPISSADRRVQLTGE*PTFQLH
Trigger: ATGCAGCTGAAATGTGGGCAACTCTCCTGTCAGCTG...AACTCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS-3UTR CAA 90 bp TTTTCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGACCTCTGATGCTTTGCTaGCACAACGTGTCACGGCGA +
Preference number: 5 (lower is better)
Translates to: FSTWIERYKAPISSADRRPLMLC*HNVSRR
Trigger: TCGCCGTGACACGTTGTGCAAGCAAAGCATCAGAGG...TCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CAA 90 bp CAACCCATCAGATGTTTTCTTCAGGTGTTTCAGAAACAGGGCAAAGGGAGTCTGAGTTGGAGGACCAAGTaGGCTGGGAAGTCACCTCCA +
Preference number: 5 (lower is better)
Translates to: QPIRCFLQVFQKQGKGSLSWRTK*AGKSPP
Trigger: TGGAGGTGACTTCCCAGCCAACTTGGTCCTCCAACT...CAGACTCCCTTTGCCCTGTTTCTGAAACACCTGAAGAAAACATCTGATGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CAA 90 bp TGTTTCAGAAACAGGGCAAAGGGAGTCTGGTTACGTTGGGTTGTTCCCTTGAACCAGCTGACAGGAGAGTaGCCCACATTTCAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: CFRNRAKGVWLRWVVPLNQLTGE*PTFQLH
Trigger: ATGCAGCTGAAATGTGGGCAACTCTCCTGTCAGCTG...GTTCAAGGGAACAACCCAACGTAACCAGACTCCCTTTGCCCTGTTTCTGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CAA 90 bp TCTGATGCTTTGCTTGCACAACGTGTCACGGCGATGGGACCAAGGATGGCACCGTGTAAAAGACATATTTaGGGGTCTGGCCAATTTCCA +
Preference number: 5 (lower is better)
Translates to: SDALLAQRVTAMGPRMAPCKRHI*GSGQFP
Trigger: TGGAAATTGGCCAGACCCCAAAATATGTCTTTTACA...CGGTGCCATCCTTGGTCCCATCGCCGTGACACGTTGTGCAAGCAAAGCATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS-3UTR CAA 90 bp TTTTCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTGACAGGAGAGAGACCAGCTGTTTCTaGCTGTTTGTGGCTATGCAC +
Preference number: 5 (lower is better)
Translates to: FSTWIERYKAPISSADRRETSCF*LFVAMH
Trigger: GTGCATAGCCACAAACAGCAAGAAACAGCTGGTCTC...TCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS TCA 90 bp TTTTTCCACGTGGATAGAGAGGTACAAAGCACCCATCTCTTCAGCTaGCAGGAGAGTTGCCCACATTTCAGCTGCATATTCCTATTCTCT +
Preference number: 5 (lower is better)
Translates to: FFHVDREVQSTHLFS*QESCPHFSCIFLFS
Trigger: AGAGAATAGGAATATGCAGCTGAAATGTGGGCAACTCTCCTGTCAGCTGAAGAGATGGGTGCTTTGTACCTCTCTATCCACGTGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402988.6
ENST00000428245.5
CDS CCA 72 bp GGAGCCCGATGGCAGAGCCTCCTGACAGGGACAGAGTaGGGTCTGGCTCCATGGGCTCTGCTTCTGTGGGCT +
Preference number: 6 (lower is better)
Translates to: GARWQSLLTGTE*GLAPWALLLWA
Trigger: AGCCCACAGAAGCAGAGCCCATGGAGCCAGACCCCACTCTGTCCCTGTCAGGAGGCTCTGCCATCGGGCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402988.6
ENST00000428245.5
ENST00000441389.1
CDS CCA 72 bp CTCTCATTCTCTCACCGTACAATCCCCGCCGGGAGATaGAGGGAGAAGCAGAATCGCCCGCTCCTATCACTC +
Preference number: 6 (lower is better)
Translates to: LSFSHRTIPAGR*REKQNRPLLSL
Trigger: GAGTGATAGGAGCGGGCGATTCTGCTTCTCCCTCCATCTCCCGGCGGGGATTGTACGGTGAGAGAATGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402988.6
CDS CCA 72 bp TGTCTTCAAGCCTTCCGGGGACAGGAAGATGGACACTaGCTCCTTCGGTCAAGGTGTTCAGCTGTGCCGAGA +
Preference number: 6 (lower is better)
Translates to: CLQAFRGQEDGH*LLRSRCSAVPR
Trigger: TCTCGGCACAGCTGAACACCTTGACCGAAGGAGCCAGTGTCCATCTTCCTGTCCCCGGAAGGCTTGAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428245.5
CDS CCA 72 bp TGGAGGCTGTCTTCAAGCCTTCCGGGGACAGGAAGATaGACACTGGCTCCTTCGGTCAAGGTGTTCAGCTGT +
Preference number: 6 (lower is better)
Translates to: WRLSSSLPGTGR*TLAPSVKVFSC
Trigger: ACAGCTGAACACCTTGACCGAAGGAGCCAGTGTCCATCTTCCTGTCCCCGGAAGGCTTGAAGACAGCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428245.5
CDS GCA 72 bp AGAGGACCCCTCATCTCGTGTTCTGTCCAGGGACTGTaGAGAGAAGGTCTCCTCATCACACATGGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: RGPLISCSVQGL*REGLLITHGVF
Trigger: GAAGACCCCATGTGTGATGAGGAGACCTTCTCTGCACAGTCCCTGGACAGAACACGAGATGAGGGGTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592507.1
CDS CCA 72 bp CCAGGGACTGTGCAGAGAAGGTCTCCTCATCACACATaGGGTCTTCATAGACCTGTACAGTCGCGTCTGCAG +
Preference number: 6 (lower is better)
Translates to: PGTVQRRSPHHT*GLHRPVQSRLQ
Trigger: CTGCAGACGCGACTGTACAGGTCTATGAAGACCCCATGTGTGATGAGGAGACCTTCTCTGCACAGTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592507.1
CDS GCA 72 bp GCGAGATGGTTACAGGCTCAGAGACCAGCTGTTTCTTaGTGTTTGTGGCTATGCACATGTAGGTGCCCAGCT +
Preference number: 6 (lower is better)
Translates to: ARWLQAQRPAVS*CLWLCTCRCPA
Trigger: AGCTGGGCACCTACATGTGCATAGCCACAAACAGCAAGAAACAGCTGGTCTCTGAGCCTGTAACCATCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402988.6
ENST00000428245.5
ENST00000441389.1
CDS CCA 72 bp TTACAGGCTCAGAGACCAGCTGTTTCTTGCTGTTTGTaGCTATGCACATGTAGGTGCCCAGCTGCTCACAGG +
Preference number: 6 (lower is better)
Translates to: LQAQRPAVSCCL*LCTCRCPAAHR
Trigger: CCTGTGAGCAGCTGGGCACCTACATGTGCATAGCCACAAACAGCAAGAAACAGCTGGTCTCTGAGCCTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402988.6
ENST00000428245.5
ENST00000441389.1
CDS CAA 90 bp TCCTTCACACCCTTCCTGGTATTACCTCTTCAGCTGACAGGAGAGTaGCCCACATTTCAGCTGCATATTCCTATTCTCTGCCTGTCAGTC +
Preference number: 6 (lower is better)
Translates to: SFTPFLVLPLQLTGE*PTFQLHIPILCLSV
Trigger: GACTGACAGGCAGAGAATAGGAATATGCAGCTGAAATGTGGGCAACTCTCCTGTCAGCTGAAGAGGTAATACCAGGAAGGGTGTGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441389.1
CDS CAA 72 bp CCCTTCCTGGTATTACCTCTTCAGCTGACAGGAGAGTaGCCCACATTTCAGCTGCATATTCCTATTCTCTGC +
Preference number: 6 (lower is better)
Translates to: PFLVLPLQLTGE*PTFQLHIPILC
Trigger: GCAGAGAATAGGAATATGCAGCTGAAATGTGGGCAACTCTCCTGTCAGCTGAAGAGGTAATACCAGGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441389.1