RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGSF22 (Homo sapiens)

Ensembl gene IDs: ENSG00000179057

Ensembl transcript IDs: ENST00000319338.6, ENST00000412229.2, ENST00000504981.5, ENST00000510673.1, ENST00000513874.6

Found 674 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAGGCGCAGGTCATGGTGCAGTCCTGGCCGCGGAGCACCGTGTGTaGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTT +
Preference number: 1 (lower is better)
Translates to: EGAGHGAVLAAEHRV*LEGRHEARRVAPVL
Trigger: AAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACACACGGTGCTCCGCGGCCAGGACTGCACCATGACCTGCGCCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR CCA 90 bp GTGGGCCGCGGGTTCCCAAGGAAGGCGCAGGTCATGGTGCAGTCCTaGCCGCGGAGCACCGTGTGTGGCTTGAGGGGCGTCACGAAGCGC +
Preference number: 1 (lower is better)
Translates to: VGRGFPRKAQVMVQS*PRSTVCGLRGVTKR
Trigger: GCGCTTCGTGACGCCCCTCAAGCCACACACGGTGCTCCGCGGCCAGGACTGCACCATGACCTGCGCCTTCCTTGGGAACCCGCGGCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR TCA 90 bp CGCAGGTCATGGTGCAGTCCTGGCCGCGGAGCACCGTGTGTGGCTTaGGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCT +
Preference number: 1 (lower is better)
Translates to: RRSWCSPGRGAPCVA*GASRSAARGASPSS
Trigger: AGAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACACACGGTGCTCCGCGGCCAGGACTGCACCATGACCTGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR TCA 90 bp AGTACTTCCTGCCTGGGAGCAGCCCCGTCACTGTGTACTTGTTGCTaGAGACACGCTCGGCTGCCGTGTACCAGGTGGCTGTGCTTGCAT +
Preference number: 1 (lower is better)
Translates to: STSCLGAAPSLCTCC*RHARLPCTRWLCLH
Trigger: ATGCAAGCACAGCCACCTGGTACACGGCAGCCGAGCGTGTCTTCAGCAACAAGTACACAGTGACGGGGCTGCTCCCAGGCAGGAAGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR GCA 90 bp GTTGCTGAAGACACGCTCGGCTGCCGTGTACCAGGTGGCTGTGCTTaGATCCCGCTTCATGATGATGTAGTGAGCCTCACCGTCCTCCTG +
Preference number: 1 (lower is better)
Translates to: VAEDTLGCRVPGGCA*IPLHDDVVSLTVLL
Trigger: CAGGAGGACGGTGAGGCTCACTACATCATCATGAAGCGGGATGCAAGCACAGCCACCTGGTACACGGCAGCCGAGCGTGTCTTCAGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR GCA 90 bp GAGCAGCCCCGTCACTGTGTACTTGTTGCTGAAGACACGCTCGGCTaGCGTGTACCAGGTGGCTGTGCTTGCATCCCGCTTCATGATGAT +
Preference number: 1 (lower is better)
Translates to: EQPRHCVLVAEDTLG*RVPGGCACIPLHDD
Trigger: ATCATCATGAAGCGGGATGCAAGCACAGCCACCTGGTACACGGCAGCCGAGCGTGTCTTCAGCAACAAGTACACAGTGACGGGGCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR CCA 90 bp CCGCTTCATGATGATGTAGTGAGCCTCACCGTCCTCCTGCACATCTaGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTC +
Preference number: 1 (lower is better)
Translates to: PLHDDVVSLTVLLHI*AVVPGQSHCVGDFL
Trigger: GAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCCAGATGTGCAGGAGGACGGTGAGGCTCACTACATCATCATGAAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR TCA 90 bp CCATGCAGAGGACAGGCCAAGAAACTCCACATCATAACAGCCTCCTaGTGCCTGGGCTTGGCTGGAGCTCACATGAGGTGCTTTGATTTC +
Preference number: 1 (lower is better)
Translates to: PCRGQAKKLHIITAS*CLGLAGAHMRCFDF
Trigger: GAAATCAAAGCACCTCATGTGAGCTCCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGTCCTCTGCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR CCA 90 bp CGGTACACCCCTGAGTCAGAGCGCTTGGTGCTATTAATGAGGAACTaGGAGTGGTTTTTGCTCTTGGTAATTGTCTCTCGGCCCTTGGTG +
Preference number: 1 (lower is better)
Translates to: RYTPESERLVLLMRN*EWFLLLVIVSRPLV
Trigger: CACCAAGGGCCGAGAGACAATTACCAAGAGCAAAAACCACTCCCAGTTCCTCATTAATAGCACCAAGCGCTCTGACTCAGGGGTGTACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR TCA 90 bp GCGTGCTTCTCCAAACTCATTCTGAAGCAAGATTCGGTACACCCCTaGGTCAGAGCGCTTGGTGCTATTAATGAGGAACTGGGAGTGGTT +
Preference number: 1 (lower is better)
Translates to: ACFSKLILKQDSVHP*VRALGAINEELGVV
Trigger: AACCACTCCCAGTTCCTCATTAATAGCACCAAGCGCTCTGACTCAGGGGTGTACCGAATCTTGCTTCAGAATGAGTTTGGAGAAGCACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR GCA 90 bp TGCCTGGGCTTGGCTGGAGCTCACATGAGGTGCTTTGATTTCTTCTaGAGACTCTCGGTGATGGATGCTACAACTGACTTATCATCTTTG +
Preference number: 1 (lower is better)
Translates to: CLGLAGAHMRCFDFF*RLSVMDATTDLSSL
Trigger: CAAAGATGATAAGTCAGTTGTAGCATCCATCACCGAGAGTCTGCAGAAGAAATCAAAGCACCTCATGTGAGCTCCAGCCAAGCCCAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR CAA 90 bp GCGCAGGTCATGGTGCAGTCCTGGCCGCGGAGCACCGTGTGTGGCTaGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTC +
Preference number: 2 (lower is better)
Translates to: AQVMVQSWPRSTVCG*RGVTKRGAWRQSFF
Trigger: GAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACACACGGTGCTCCGCGGCCAGGACTGCACCATGACCTGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR TCA 90 bp GCGGAGCACCGTGTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCATCTTCTCGTAGGGCTTaGGCTTGGCGCTCAGGTCCT +
Preference number: 2 (lower is better)
Translates to: AEHRVWLEGRHEARRVAPSSRRA*AWRSGP
Trigger: AGGACCTGAGCGCCAAGCTCAAGCCCTACGAGAAGA...TGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACACACGGTGCTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR CCA 90 bp GTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCTCTCTCTCGGCCCTTGGTaGGAACGCCATCTTTCTGCC +
Preference number: 2 (lower is better)
Translates to: VWLEGRHEARRVAPVLLLSLGPW*ERHLSA
Trigger: GGCAGAAAGATGGCGTTCCCACCAAGGGCCGAGAGA...GAGAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR CCA 90 bp CGCGGGTTCCCAAGGAAGGCGCAGGTCATGGTGCAGTCCTGGCCGCGGAGCACCACAACCGTAGGTTTGTaGGGGGCCGAGGGAAATCTG +
Preference number: 2 (lower is better)
Translates to: RGFPRKAQVMVQSWPRSTTTVGL*GAEGNL
Trigger: CAGATTTCCCTCGGCCCCCCACAAACCTACGGTTGT...GGTGCTCCGCGGCCAGGACTGCACCATGACCTGCGCCTTCCTTGGGAACCCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR CCA 90 bp GCGGAGCACCGTGTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCATCAGAGTCACTGTGTTaGGGACTTCCTCAAACAACC +
Preference number: 2 (lower is better)
Translates to: AEHRVWLEGRHEARRVAPSESLC*GLPQTT
Trigger: GGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGA...TGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACACACGGTGCTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR CCA 90 bp CGCGGGTTCCCAAGGAAGGCGCAGGTCATGGTGCAGTCCTGGCCGCGGAGCACCTGCACATCTGGGCTGTaGTTCCAGGTCAGAGTCACT +
Preference number: 2 (lower is better)
Translates to: RGFPRKAQVMVQSWPRSTCTSGL*FQVRVT
Trigger: AGTGACTCTGACCTGGAACCACAGCCCAGATGTGCA...GGTGCTCCGCGGCCAGGACTGCACCATGACCTGCGCCTTCCTTGGGAACCCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR GCA 90 bp CTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCTCGTAGGGCCAGGTGGCTGTGCTTaGATCCCGCTTCATGATGAT +
Preference number: 2 (lower is better)
Translates to: LEGRHEARRVAPVLLLVGPGGCA*IPLHDD
Trigger: ATCATCATGAAGCGGGATGCAAGCACAGCCACCTGG...CCCTACGAGAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR CAA 90 bp AGCGTGCAGGTGGGGATGACGAGGGTGCACACGCCGCTGGTGGAGTaGTACCAGAACTTGGAGTTGGCCGTGATGTTGACGTCGCCCTTG +
Preference number: 2 (lower is better)
Translates to: SVQVGMTRVHTPLVE*YQNLELAVMLTSPL
Trigger: CAAGGGCGACGTCAACATCACGGCCAACTCCAAGTTCTGGTACAACTCCACCAGCGGCGTGTGCACCCTCGTCATCCCCACCTGCACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR TCA 90 bp CTTATCATCTTTGTCATAGACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGGCACCGTGTGTGGCTTaGGGGGCGTCACGAAGCGCG +
Preference number: 2 (lower is better)
Translates to: LIIFVIDGERAAAAVLAQAPCVA*GASRSA
Trigger: CGCGCTTCGTGACGCCCCTCAAGCCACACACGGTGC...CTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGTCTATGACAAAGATGATAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR TCA 90 bp GTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCTCTCTCCAAACTCATTCTaGAGCAAGATTCGGTACACC +
Preference number: 2 (lower is better)
Translates to: VWLEGRHEARRVAPVLLLSPNSF*SKIRYT
Trigger: GGTGTACCGAATCTTGCTTCAGAATGAGTTTGGAGA...GAGAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR CCA 90 bp GAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGAGCTCACATACGAAGCGCGGCGCGTaGCGCCAGTCCTTCTTCTCG +
Preference number: 2 (lower is better)
Translates to: ETPHHNSLLMPGLGWSSHTKRGA*RQSFFS
Trigger: CGAGAAGAAGGACTGGCGCCACGCGCCGCGCTTCGT...ATGTGAGCTCCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR GCA 90 bp CTGGGCTTGGCTGGAGCTCACATGAGGTGCTTTGATTTCTTCTGCAGACTCTCGAGCTGCTGCGGTCCTTaGCCAGCTCGTTCTCCACCA +
Preference number: 2 (lower is better)
Translates to: LGLAGAHMRCFDFFCRLSSCCGP*PARSPP
Trigger: TGGTGGAGAACGAGCTGGGCAAGGACCGCAGCAGCT...CGAGAGTCTGCAGAAGAAATCAAAGCACCTCATGTGAGCTCCAGCCAAGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR CCA 90 bp GCTGGAGCTCACATGAGGTGCTTTGATTTCTTCTGCAGACTCTCGGTGATGGATGGAAGGCGCAGGTCATaGTGCAGTCCTGGCCGCGGA +
Preference number: 2 (lower is better)
Translates to: AGAHMRCFDFFCRLSVMDGRRRS*CSPGRG
Trigger: TCCGCGGCCAGGACTGCACCATGACCTGCGCCTTCC...ATCCATCACCGAGAGTCTGCAGAAGAAATCAAAGCACCTCATGTGAGCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR TCA 90 bp TTCTTCTGCAGACTCTCGGTGATGGATGCTACAACTGACTTATCATCTTTGTCAGCGTGCAGGTGGGGATaGCGAGGGTGCACACGCCGC +
Preference number: 2 (lower is better)
Translates to: FFCRLSVMDATTDLSSLSACRWG*RGCTRR
Trigger: GCGGCGTGTGCACCCTCGTCATCCCCACCTGCACGC...TGACAAAGATGATAAGTCAGTTGTAGCATCCATCACCGAGAGTCTGCAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR CCA 90 bp GCTGGAGCTCACATGAGGTGCTTTGATTTCTTCTGCAGACTCTCGGTGATGGATTGTAGAGGGTCACTGTaGGCCGCGGGTTCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: AGAHMRCFDFFCRLSVMDCRGSL*AAGSQG
Trigger: TCCTTGGGAACCCGCGGCCCACAGTGACCCTCTACA...ATCCATCACCGAGAGTCTGCAGAAGAAATCAAAGCACCTCATGTGAGCTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR CCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGTCATGGTGCAGTCCTaGCCGCGGAGCACCGTGTGT +
Preference number: 2 (lower is better)
Translates to: CPIPSLNVYINKHQRANWVMVQS*PRSTVC
Trigger: ACACACGGTGCTCCGCGGCCAGGACTGCACCATGAC...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR CAA 90 bp GAGCGCTTGGTGCTATTAATGAGGAACTGGGAGTGGTTTTTGCTCTaGGTAATTGTCTCTCGGCCCTTGGTGGGAACGCCATCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: ERLVLLMRNWEWFLL*VIVSRPLVGTPSFC
Trigger: GCAGAAAGATGGCGTTCCCACCAAGGGCCGAGAGACAATTACCAAGAGCAAAAACCACTCCCAGTTCCTCATTAATAGCACCAAGCGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR GCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGAAGACACGCTCGGCTaGCGTGTACCAGGTGGCTGT +
Preference number: 2 (lower is better)
Translates to: PIPSLNVYINKHQRANWAEDTLG*RVPGGC
Trigger: ACAGCCACCTGGTACACGGCAGCCGAGCGTGTCTTC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR TCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGATTCGGTACACCCCTaGGTCAGAGCGCTTGGTGCT +
Preference number: 2 (lower is better)
Translates to: PIPSLNVYINKHQRANWADSVHP*VRALGA
Trigger: AGCACCAAGCGCTCTGACTCAGGGGTGTACCGAATC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR TCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTCTTTGTCATAGACGGTaGGCGTGCAGCTGCTGCGGT +
Preference number: 2 (lower is better)
Translates to: PIPSLNVYINKHQRANWALCHRR*ACSCCG
Trigger: ACCGCAGCAGCTGCACGCTCACCGTCTATGACAAAG...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR CCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGTCCTCCTGCACATCTaGGCTGTGGTTCCAGGTCAG +
Preference number: 2 (lower is better)
Translates to: CPIPSLNVYINKHQRANWVLLHI*AVVPGQ
Trigger: CTGACCTGGAACCACAGCCCAGATGTGCAGGAGGAC...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR TCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTATCATAACAGCCTCCTaGTGCCTGGGCTTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: PIPSLNVYINKHQRANWAIITAS*CLGLAG
Trigger: TCCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGAT...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
3UTR-3UTR GCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACTCCTACACTGGGCCATaGAGAGGACAGGCCAAGAAA +
Preference number: 2 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHSYTGP*RGQAKK
Trigger: TTTCTTGGCCTGTCCTCTGCATGGCCCAGTGTAGGA...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
3UTR CCA 72 bp GGTCATGGTGCAGTCCTGGCCGCGGAGCACCGTGTGTaGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCG +
Preference number: 3 (lower is better)
Translates to: GHGAVLAAEHRV*LEGRHEARRVA
Trigger: CGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACACACGGTGCTCCGCGGCCAGGACTGCACCATGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR CCA 72 bp GGGTTCCCAAGGAAGGCGCAGGTCATGGTGCAGTCCTaGCCGCGGAGCACCGTGTGTGGCTTGAGGGGCGTC +
Preference number: 3 (lower is better)
Translates to: GFPRKAQVMVQS*PRSTVCGLRGV
Trigger: GACGCCCCTCAAGCCACACACGGTGCTCCGCGGCCAGGACTGCACCATGACCTGCGCCTTCCTTGGGAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR CAA 90 bp CCGCGGGTTCCCAAGGAAGGCGCAGGTCATGGTGCAGTCCTGGCCGCGGAGCACCCTGAGTCAGAGCGCTaGGTGCTATTAATGAGGAAC +
Preference number: 3 (lower is better)
Translates to: PRVPKEGAGHGAVLAAEHPESER*VLLMRN
Trigger: GTTCCTCATTAATAGCACCAAGCGCTCTGACTCAGG...GTGCTCCGCGGCCAGGACTGCACCATGACCTGCGCCTTCCTTGGGAACCCGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR TCA 72 bp TGCCTGGGAGCAGCCCCGTCACTGTGTACTTGTTGCTaGAGACACGCTCGGCTGCCGTGTACCAGGTGGCTG +
Preference number: 3 (lower is better)
Translates to: CLGAAPSLCTCC*RHARLPCTRWL
Trigger: CAGCCACCTGGTACACGGCAGCCGAGCGTGTCTTCAGCAACAAGTACACAGTGACGGGGCTGCTCCCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR GCA 72 bp GACACGCTCGGCTGCCGTGTACCAGGTGGCTGTGCTTaGATCCCGCTTCATGATGATGTAGTGAGCCTCACC +
Preference number: 3 (lower is better)
Translates to: DTLGCRVPGGCA*IPLHDDVVSLT
Trigger: GGTGAGGCTCACTACATCATCATGAAGCGGGATGCAAGCACAGCCACCTGGTACACGGCAGCCGAGCGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR GCA 72 bp CGTCACTGTGTACTTGTTGCTGAAGACACGCTCGGCTaGCGTGTACCAGGTGGCTGTGCTTGCATCCCGCTT +
Preference number: 3 (lower is better)
Translates to: RHCVLVAEDTLG*RVPGGCACIPL
Trigger: AAGCGGGATGCAAGCACAGCCACCTGGTACACGGCAGCCGAGCGTGTCTTCAGCAACAAGTACACAGTGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR CCA 72 bp CTGTGTTGGGGACTTCCTCAAACAACCGTAGGTTTGTaGGGGGCCGAGGGAAATCTGCCACGCGCACATGGA +
Preference number: 3 (lower is better)
Translates to: LCWGLPQTTVGL*GAEGNLPRAHG
Trigger: TCCATGTGCGCGTGGCAGATTTCCCTCGGCCCCCCACAAACCTACGGTTGTTTGAGGAAGTCCCCAACACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR CAA 90 bp GTCCTTCTTCTCGTAGGGCTTGAGCTTGGCGCTCAGGTCCTGGATCTGGTCCTTATTGTCTCTCGGCCCTaGGTGGGAACGCCATCTTTC +
Preference number: 3 (lower is better)
Translates to: VLLLVGLELGAQVLDLVLIVSRP*VGTPSF
Trigger: GAAAGATGGCGTTCCCACCAAGGGCCGAGAGACAAT...AAGGACCAGATCCAGGACCTGAGCGCCAAGCTCAAGCCCTACGAGAAGAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR TCA 72 bp GCTCACTGTCACCGATTTCATTCCGAGCCACCACTCTaGAGTAGTACTTCCTGCCTGGGAGCAGCCCCGTCA +
Preference number: 3 (lower is better)
Translates to: AHCHRFHSEPPL*SSTSCLGAAPS
Trigger: TGACGGGGCTGCTCCCAGGCAGGAAGTACTACTTCAGAGTGGTGGCTCGGAATGAAATCGGTGACAGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR TCA 72 bp GGACAGGCCAAGAAACTCCACATCATAACAGCCTCCTaGTGCCTGGGCTTGGCTGGAGCTCACATGAGGTGC +
Preference number: 3 (lower is better)
Translates to: GQAKKLHIITAS*CLGLAGAHMRC
Trigger: GCACCTCATGTGAGCTCCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR CCA 72 bp GATGATGTAGTGAGCCTCACCGTCCTCCTGCACATCTaGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGG +
Preference number: 3 (lower is better)
Translates to: DDVVSLTVLLHI*AVVPGQSHCVG
Trigger: CCCAACACAGTGACTCTGACCTGGAACCACAGCCCAGATGTGCAGGAGGACGGTGAGGCTCACTACATCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR CAA 90 bp CTTATCATCTTTGTCATAGACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGGTCACTGTGTACTTGTaGCTGAAGACACGCTCGGCT +
Preference number: 3 (lower is better)
Translates to: LIIFVIDGERAAAAVLAQVTVYL*LKTRSA
Trigger: AGCCGAGCGTGTCTTCAGCAACAAGTACACAGTGAC...CTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGTCTATGACAAAGATGATAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR CCA 72 bp ATTCCGAGCCACCACTCTGAAGTAGTACTTCCTGCCTaGGAGCAGCCCCGTCACTGTGTACTTGTTGCTGAA +
Preference number: 3 (lower is better)
Translates to: IPSHHSEVVLPA*EQPRHCVLVAE
Trigger: TTCAGCAACAAGTACACAGTGACGGGGCTGCTCCCAGGCAGGAAGTACTACTTCAGAGTGGTGGCTCGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR TCA 72 bp ATGCCTGGGCTTGGCTGGAGCTCACATGAGGTGCTTTaGTTTCTTCTGCAGACTCTCGGTGATGGATGCTAC +
Preference number: 3 (lower is better)
Translates to: MPGLGWSSHEVL*FLLQTLGDGCY
Trigger: GTAGCATCCATCACCGAGAGTCTGCAGAAGAAATCAAAGCACCTCATGTGAGCTCCAGCCAAGCCCAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR CAA 90 bp GCTGGAGCTCACATGAGGTGCTTTGATTTCTTCTGCAGACTCTCGGTGATGGATACGCCGCTGGTGGAGTaGTACCAGAACTTGGAGTTG +
Preference number: 3 (lower is better)
Translates to: AGAHMRCFDFFCRLSVMDTPLVE*YQNLEL
Trigger: CAACTCCAAGTTCTGGTACAACTCCACCAGCGGCGT...ATCCATCACCGAGAGTCTGCAGAAGAAATCAAAGCACCTCATGTGAGCTCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR-3UTR CAA 90 bp ATCTGGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAAGAGTGGTTTTTGCTCTaGGTAATTGTCTCTCGGCCC +
Preference number: 3 (lower is better)
Translates to: IWAVVPGQSHCVGDFLKQEWFLL*VIVSRP
Trigger: GGGCCGAGAGACAATTACCAAGAGCAAAAACCACTC...TTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCCAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR GCA 72 bp AGGGAAATCTGCCACGCGCACATGGATGTCATAGCGTaGTTCTCCAAACTCATTCTGAAGCAAGATTCGGTA +
Preference number: 3 (lower is better)
Translates to: REICHAHMDVIA*FSKLILKQDSV
Trigger: TACCGAATCTTGCTTCAGAATGAGTTTGGAGAAGCACGCTATGACATCCATGTGCGCGTGGCAGATTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR CCA 72 bp CCTGAGTCAGAGCGCTTGGTGCTATTAATGAGGAACTaGGAGTGGTTTTTGCTCTTGGTAATTGTCTCTCGG +
Preference number: 3 (lower is better)
Translates to: PESERLVLLMRN*EWFLLLVIVSR
Trigger: CCGAGAGACAATTACCAAGAGCAAAAACCACTCCCAGTTCCTCATTAATAGCACCAAGCGCTCTGACTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR TCA 72 bp TCCAAACTCATTCTGAAGCAAGATTCGGTACACCCCTaGGTCAGAGCGCTTGGTGCTATTAATGAGGAACTG +
Preference number: 3 (lower is better)
Translates to: SKLILKQDSVHP*VRALGAINEEL
Trigger: CAGTTCCTCATTAATAGCACCAAGCGCTCTGACTCAGGGGTGTACCGAATCTTGCTTCAGAATGAGTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR TCA 72 bp TTTCTTCTGCAGACTCTCGGTGATGGATGCTACAACTaGCTTATCATCTTTGTCATAGACGGTGAGCGTGCA +
Preference number: 3 (lower is better)
Translates to: FLLQTLGDGCYN*LIIFVIDGERA
Trigger: TGCACGCTCACCGTCTATGACAAAGATGATAAGTCAGTTGTAGCATCCATCACCGAGAGTCTGCAGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp GTGTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCCCCCCTCGGGCGCGGTaGCCGGTTGAGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VCGLRGVTKRGAWRQSFFPPRAR*PVEASP
Trigger: TGGAGAAGCCTCAACCGGTCACCGCGCCCGAGGGGG...GAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACACAC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp CCGCGGGTTCCCAAGGAAGGCGCAGGTCATGGTGCAGTCCTGGCCGCGGAGCACGCACCGTGTGTGGCTTaGGGGGCGTCACGAAGCGCG +
Preference number: 4 (lower is better)
Translates to: PRVPKEGAGHGAVLAAEHAPCVA*GASRSA
Trigger: CGCGCTTCGTGACGCCCCTCAAGCCACACACGGTGC...GTGCTCCGCGGCCAGGACTGCACCATGACCTGCGCCTTCCTTGGGAACCCGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp GTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCTCGGGTGGGTCTCCCTCTaGAGGCTCCCGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VWLEGRHEARRVAPVLLLGWVSL*RLPPGQ
Trigger: CTGGCCTGGCGGGAGCCTGCAGAGGGAGACCCACCC...GAGAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp ACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGCTCGTTCTCCACCAGCACGGCGTGCAGGTGGGGATaGCGAGGGTGCACACGCCGC +
Preference number: 4 (lower is better)
Translates to: TVSVQLLRSLPSSFSTSTACRWG*RGCTRR
Trigger: GCGGCGTGTGCACCCTCGTCATCCCCACCTGCACGC...CGTGCTGGTGGAGAACGAGCTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp CCGCGGGTTCCCAAGGAAGGCGCAGGTCATGGTGCAGTCCTGGCCGCGGAGCACGGAAGGCGCAGGTCATaGTGCAGTCCTGGCCGCGGA +
Preference number: 4 (lower is better)
Translates to: PRVPKEGAGHGAVLAAEHGRRRS*CSPGRG
Trigger: TCCGCGGCCAGGACTGCACCATGACCTGCGCCTTCC...GTGCTCCGCGGCCAGGACTGCACCATGACCTGCGCCTTCCTTGGGAACCCGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp GCGGAGCACCGTGTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGCTCATCCAGCACTGTaGGCTCTGCACTCATCCGCT +
Preference number: 4 (lower is better)
Translates to: AEHRVWLEGRHEARRVAPAHPAL*ALHSSA
Trigger: AGCGGATGAGTGCAGAGCTCACAGTGCTGGATGAGC...TGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACACACGGTGCTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp CGCGGGTTCCCAAGGAAGGCGCAGGTCATGGTGCAGTCCTGGCCGCGGAGCACCGGCCTACCTTCACAGTaGTGGCGTGCGCAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RGFPRKAQVMVQSWPRSTGLPSQ*WRAQPV
Trigger: CACTGGCTGCGCACGCCATCACTGTGAAGGTAGGCC...GGTGCTCCGCGGCCAGGACTGCACCATGACCTGCGCCTTCCTTGGGAACCCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp GTGTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCGGTTTGGCGTTCCCCTaGACCCGGGCTCGGAACACG +
Preference number: 4 (lower is better)
Translates to: VCGLRGVTKRGAWRQSFFGLAFP*TRARNT
Trigger: CGTGTTCCGAGCCCGGGTGCAGGGGAACGCCAAACC...GAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp GCGGAGCACCGTGTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCATTCACAGTGATGGCGTaGGCAGCCAGTGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: AEHRVWLEGRHEARRVAPFTVMA*AASASS
Trigger: ACTGGAGGCACTGGCTGCGCACGCCATCACTGTGAA...TGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACACACGGTGCTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GCGGAGCACCGTGTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCACATCCACAGTGCACTTaGTGCCCTGGATGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: AEHRVWLEGRHEARRVAPHPQCT*CPGWGP
Trigger: AGGACCCCATCCAGGGCACCAAGTGCACTGTGGATG...TGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACACACGGTGCTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GTCGCCCTTGTAGAGGGTCACTGTGGGCCGCGGGTTCCCAAGGAAGGCGCAGGTGGTGGTGAGCCCTGGTaGTGGCATGGCACGGACCCC +
Preference number: 4 (lower is better)
Translates to: VALVEGHCGPRVPKEGAGGGEPW*WHGTDP
Trigger: GGGGTCCGTGCCATGCCACCACCAGGGCTCACCACC...ACCTGCGCCTTCCTTGGGAACCCGCGGCCCACAGTGACCCTCTACAAGGGCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GTGTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCAGGAGATGTGGGGTTTaGCGTTCCCCTGCACCCGGG +
Preference number: 4 (lower is better)
Translates to: VCGLRGVTKRGAWRQSFFRRCGV*RSPAPG
Trigger: CCCGGGTGCAGGGGAACGCCAAACCCCACATCTCCT...GAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp ACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGCTCGTTCTCCACCAGCACGGGTGAGCCCTGGTGGTaGCATGGCACGGACCCCCTT +
Preference number: 4 (lower is better)
Translates to: TVSVQLLRSLPSSFSTSTGEPWW*HGTDPL
Trigger: AAGGGGGTCCGTGCCATGCCACCACCAGGGCTCACC...CGTGCTGGTGGAGAACGAGCTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp GCGGAGCACCGTGTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGCTTCACATCGTACTTaGCCAGGGAGTACTGGATCC +
Preference number: 4 (lower is better)
Translates to: AEHRVWLEGRHEARRVAPASHRT*PGSTGS
Trigger: GGATCCAGTACTCCCTGGGCAAGTACGATGTGAAGC...TGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACACACGGTGCTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp CTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCTCGTAGGGTCCCGCTCTTCACTGTaGCCAGACGCTCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: LEGRHEARRVAPVLLLVGSRSSL*PDAPPQ
Trigger: CTGTGGAGGAGCGTCTGGCCACAGTGAAGAGCGGGA...CCCTACGAGAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp GTGTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCGATTCGGTACACCCCTaGGTCAGAGCGCTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: VCGLRGVTKRGAWRQSFFDSVHP*VRALGA
Trigger: AGCACCAAGCGCTCTGACTCAGGGGTGTACCGAATC...GAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp GTGTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCCTTTGTCATAGACGGTaGGCGTGCAGCTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: VCGLRGVTKRGAWRQSFFLCHRR*ACSCCG
Trigger: ACCGCAGCAGCTGCACGCTCACCGTCTATGACAAAG...GAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp GTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCTCGTGTACTTGCCCTCGTaGTCAGGGCCCATACTGGGA +
Preference number: 4 (lower is better)
Translates to: VWLEGRHEARRVAPVLLLVYLPS*SGPILG
Trigger: TCCCAGTATGGGCCCTGAGCACGAGGGCAAGTACAC...GAGAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp CGCGGGTTCCCAAGGAAGGCGCAGGTCATGGTGCAGTCCTGGCCGCGGAGCACCGTCTCCTTCTTCCTTTaGCCCAACAGTGAGGCTACC +
Preference number: 4 (lower is better)
Translates to: RGFPRKAQVMVQSWPRSTVSFFL*PNSEAT
Trigger: GGTAGCCTCACTGTTGGGGCAAAGGAAGAAGGAGAC...GGTGCTCCGCGGCCAGGACTGCACCATGACCTGCGCCTTCCTTGGGAACCCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp ACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGCTCGTTCTCCACCAGCACGAACTCCATGGACACGTaGTCCTGCAGCATCTGCCGG +
Preference number: 4 (lower is better)
Translates to: TVSVQLLRSLPSSFSTSTNSMDT*SCSICR
Trigger: CCGGCAGATGCTGCAGGAGCACGTGTCCATGGAGTT...CGTGCTGGTGGAGAACGAGCTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp CTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCTCGTAGGGGTAGGGTCTCCATCCTaGATGGCCACCACAGTGTAC +
Preference number: 4 (lower is better)
Translates to: LEGRHEARRVAPVLLLVGVGSPS*MATTVY
Trigger: GTACACTGTGGTGGCCATGCAGGATGGAGACCCTAC...CCCTACGAGAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp ACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGCTCGTTCTCCACCAGCACGGGAGACCATCCACAGTaGACTTGGTGCCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: TVSVQLLRSLPSSFSTSTGDHPQ*TWCPGW
Trigger: CCATCCAGGGCACCAAGTGCACTGTGGATGGTCTCC...CGTGCTGGTGGAGAACGAGCTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp ACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGCTCGTTCTCCACCAGCACGTCTGCACGTGGGTGGTaGAGCTGGAGAACTCCATGG +
Preference number: 4 (lower is better)
Translates to: TVSVQLLRSLPSSFSTSTSARGW*SWRTPW
Trigger: CCATGGAGTTCTCCAGCTCCACCACCCACGTGCAGA...CGTGCTGGTGGAGAACGAGCTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp CGCGGGTTCCCAAGGAAGGCGCAGGTCATGGTGCAGTCCTGGCCGCGGAGCACCTTGCCCAGGGAGTACTaGATCCTCAGTGGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: RGFPRKAQVMVQSWPRSTLPREY*ILSGSV
Trigger: TACTGAGCCACTGAGGATCCAGTACTCCCTGGGCAA...GGTGCTCCGCGGCCAGGACTGCACCATGACCTGCGCCTTCCTTGGGAACCCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCTCGTGCACTTGGTGCCCTaGATGGGGTCCTTGTTGACT +
Preference number: 4 (lower is better)
Translates to: VWLEGRHEARRVAPVLLLVHLVP*MGSLLT
Trigger: AGTCAACAAGGACCCCATCCAGGGCACCAAGTGCAC...GAGAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCTCACAACCGTAGGTTTGTaGGGGGCCGAGGGAAATCTG +
Preference number: 4 (lower is better)
Translates to: VWLEGRHEARRVAPVLLLTTVGL*GAEGNL
Trigger: CAGATTTCCCTCGGCCCCCCACAAACCTACGGTTGT...GAGAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp GTCGCCCTTGTAGAGGGTCACTGTGGGCCGCGGGTTCCCAAGGAAGGCGCAGGTGCTGTGCATCCTCAATaGTCAGCTCTGCTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: VALVEGHCGPRVPKEGAGAVHPQ*SALLAC
Trigger: GCAAGCGAGCAGAGCTGATCATTGAGGATGCACAGC...ACCTGCGCCTTCCTTGGGAACCCGCGGCCCACAGTGACCCTCTACAAGGGCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp CGCGGGTTCCCAAGGAAGGCGCAGGTCATGGTGCAGTCCTGGCCGCGGAGCACCCCAGCATGTACTTGGTaGCCATCTGCTTCACATCGT +
Preference number: 4 (lower is better)
Translates to: RGFPRKAQVMVQSWPRSTPACTW*PSASHR
Trigger: ACGATGTGAAGCAGATGGGCACCAAGTACATGCTGG...GGTGCTCCGCGGCCAGGACTGCACCATGACCTGCGCCTTCCTTGGGAACCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp GTGTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCCCACTGTGTAGCAGGTaGCTGAGATGGGGATCTTTG +
Preference number: 4 (lower is better)
Translates to: VCGLRGVTKRGAWRQSFFPLCSR*LRWGSL
Trigger: CAAAGATCCCCATCTCAGGCACCTGCTACACAGTGG...GAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GTGTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCCCTCTCCCACGATCTTaGTTGTCTGGGAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: VCGLRGVTKRGAWRQSFFPLPRS*LSGRRS
Trigger: AGACCTTCTCCCAGACAACCAAGATCGTGGGAGAGG...GAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GTCGCCCTTGTAGAGGGTCACTGTGGGCCGCGGGTTCCCAAGGAAGGCGCAGGTGTCCTGGACCAGGCCTaGGGGTTTAACAGGATCCTT +
Preference number: 4 (lower is better)
Translates to: VALVEGHCGPRVPKEGAGVLDQA*GFNRIL
Trigger: AAGGATCCTGTTAAACCCCCAGGCCTGGTCCAGGAC...ACCTGCGCCTTCCTTGGGAACCCGCGGCCCACAGTGACCCTCTACAAGGGCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp ACACGCTCGGCTGCCGTGTACCAGGTGGCTGTGCTTGCATCCCGCTTCATGATGGTCATGGTGCAGTCCTaGCCGCGGAGCACCGTGTGT +
Preference number: 4 (lower is better)
Translates to: TRSAAVYQVAVLASRFMMVMVQS*PRSTVC
Trigger: ACACACGGTGCTCCGCGGCCAGGACTGCACCATGAC...CATCATGAAGCGGGATGCAAGCACAGCCACCTGGTACACGGCAGCCGAGCGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GTCGCCCTTGTAGAGGGTCACTGTGGGCCGCGGGTTCCCAAGGAAGGCGCAGGTTGCACACGCCGCTGGTaGAGTTGTACCAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: VALVEGHCGPRVPKEGAGCTRRW*SCTRTW
Trigger: CCAAGTTCTGGTACAACTCCACCAGCGGCGTGTGCA...ACCTGCGCCTTCCTTGGGAACCCGCGGCCCACAGTGACCCTCTACAAGGGCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp GTGTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCGGGCTGTCCAGGGCCTaGCTTATTTACAGCTATAAC +
Preference number: 4 (lower is better)
Translates to: VCGLRGVTKRGAWRQSFFGLSRA*LIYSYN
Trigger: GTTATAGCTGTAAATAAGGCAGGCCCTGGACAGCCC...GAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp GTCGCCCTTGTAGAGGGTCACTGTGGGCCGCGGGTTCCCAAGGAAGGCGCAGGTTCCTACACTGGGCCATaGAGAGGACAGGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: VALVEGHCGPRVPKEGAGSYTGP*RGQAKK
Trigger: TTTCTTGGCCTGTCCTCTGCATGGCCCAGTGTAGGA...ACCTGCGCCTTCCTTGGGAACCCGCGGCCCACAGTGACCCTCTACAAGGGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp ACACGCTCGGCTGCCGTGTACCAGGTGGCTGTGCTTGCATCCCGCTTCATGATGATGGTGAGCAGTGCCTaGTCTTCCCCGCGCTCCATG +
Preference number: 4 (lower is better)
Translates to: TRSAAVYQVAVLASRFMMMVSSA*SSPRSM
Trigger: CATGGAGCGCGGGGAAGACCAGGCACTGCTCACCAT...CATCATGAAGCGGGATGCAAGCACAGCCACCTGGTACACGGCAGCCGAGCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GTCCTTCTTCTCGTAGGGCTTGAGCTTGGCGCTCAGGTCCTGGATCTGGTCCTTGGTGGTGGTGAGCCCTaGTGGTGGCATGGCACGGAC +
Preference number: 4 (lower is better)
Translates to: VLLLVGLELGAQVLDLVLGGGEP*WWHGTD
Trigger: GTCCGTGCCATGCCACCACCAGGGCTCACCACCACC...AAGGACCAGATCCAGGACCTGAGCGCCAAGCTCAAGCCCTACGAGAAGAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GTCCTTCTTCTCGTAGGGCTTGAGCTTGGCGCTCAGGTCCTGGATCTGGTCCTTACGAAGCGCGGCGCGTaGCGCCAGTCCTTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: VLLLVGLELGAQVLDLVLTKRGA*RQSFFS
Trigger: CGAGAAGAAGGACTGGCGCCACGCGCCGCGCTTCGT...AAGGACCAGATCCAGGACCTGAGCGCCAAGCTCAAGCCCTACGAGAAGAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR CAA 72 bp TTCCTGCCTGGGAGCAGCCCCGTCACTGTGTACTTGTaGCTGAAGACACGCTCGGCTGCCGTGTACCAGGTG +
Preference number: 4 (lower is better)
Translates to: FLPGSSPVTVYL*LKTRSAAVYQV
Trigger: CACCTGGTACACGGCAGCCGAGCGTGTCTTCAGCAACAAGTACACAGTGACGGGGCTGCTCCCAGGCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp CGGGTTCCCAAGGAAGGCGCAGGTCATGGTGCAGTCCTGGCCGCGGAGCACCGTCATCTTCGGACACCGTaGTTTCATACTTGTCATCCC +
Preference number: 4 (lower is better)
Translates to: RVPKEGAGHGAVLAAEHRHLRTP*FHTCHP
Trigger: GGGATGACAAGTATGAAATCACGGTGTCCGAAGATG...ACGGTGCTCCGCGGCCAGGACTGCACCATGACCTGCGCCTTCCTTGGGAACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp CCCGTCACTGTGTACTTGTTGCTGAAGACACGCTCGGCTGCCGTGTACCAGGTGCAGTGCCTCCAGTACTaGCGGGTCGATGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: PVTVYLLLKTRSAAVYQVQCLQY*RVDGRR
Trigger: CCTCCTACCATCGACCCGTCAGTACTGGAGGCACTG...CACCTGGTACACGGCAGCCGAGCGTGTCTTCAGCAACAAGTACACAGTGACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGGGTTTGGCGTTCCCCTaGACCCGGGCTCGGAACACG +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWGLAFP*TRARNT
Trigger: CGTGTTCCGAGCCCGGGTGCAGGGGAACGCCAAACC...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ACGCCGCTGGTGGAGTTGTACCAGAACTTGGAGTTGGCCGTGATGTTGACGTCGGCGGAGCACCGTGTGTaGCTTGAGGGGCGTCACGAA +
Preference number: 4 (lower is better)
Translates to: TPLVELYQNLELAVMLTSAEHRV*LEGRHE
Trigger: TTCGTGACGCCCCTCAAGCCACACACGGTGCTCCGC...CGACGTCAACATCACGGCCAACTCCAAGTTCTGGTACAACTCCACCAGCGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR CAA 72 bp TACTTCCTGCCTGGGAGCAGCCCCGTCACTGTGTACTaGTTGCTGAAGACACGCTCGGCTGCCGTGTACCAG +
Preference number: 4 (lower is better)
Translates to: YFLPGSSPVTVY*LLKTRSAAVYQ
Trigger: CTGGTACACGGCAGCCGAGCGTGTCTTCAGCAACAAGTACACAGTGACGGGGCTGCTCCCAGGCAGGAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR CAA 72 bp GTGGGGATGACGAGGGTGCACACGCCGCTGGTGGAGTaGTACCAGAACTTGGAGTTGGCCGTGATGTTGACG +
Preference number: 4 (lower is better)
Translates to: VGMTRVHTPLVE*YQNLELAVMLT
Trigger: CGTCAACATCACGGCCAACTCCAAGTTCTGGTACAACTCCACCAGCGGCGTGTGCACCCTCGTCATCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp AGTGAGCCTCACCGTCCTCCTGCACATCTGGGCTGTGGTTCCAGGTCAGAGTCAGAATGGTTGTCATGGTaGCAGCAGGCGTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: SEPHRPPAHLGCGSRSESEWLSW*QQAWAL
Trigger: GAGTGCCCACGCCTGCTGTCACCATGACAACCATTC...TGACTCTGACCTGGAACCACAGCCCAGATGTGCAGGAGGACGGTGAGGCTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp ACACGCTCGGCTGCCGTGTACCAGGTGGCTGTGCTTGCATCCCGCTTCATGATGTGCCTGGCAAGTCCGTaGTCTCCTTGCCATCCTTCA +
Preference number: 4 (lower is better)
Translates to: TRSAAVYQVAVLASRFMMCLASP*SPCHPS
Trigger: TGAAGGATGGCAAGGAGATCACGGACTTGCCAGGCA...CATCATGAAGCGGGATGCAAGCACAGCCACCTGGTACACGGCAGCCGAGCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp GGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTACCCGGAAGGGGACCTTaGTGTGGGCCGTGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: GCGSRSESLCWGLPQTTVPGRGP*CGPCGL
Trigger: TAGGCCACACGGCCCACATCAAGGTCCCCTTCCGGG...TACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp AGTGAGCCTCACCGTCCTCCTGCACATCTGGGCTGTGGTTCCAGGTCAGAGTCACACAGTTGGAGATGGTaGGCAGTGCCTGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SEPHRPPAHLGCGSRSESHSWRW*AVPGLP
Trigger: GGGAAGACCAGGCACTGCTCACCATCTCCAACTGTG...TGACTCTGACCTGGAACCACAGCCCAGATGTGCAGGAGGACGGTGAGGCTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp CCGCGGGTTCCCAAGGAAGGCGCAGGTCATGGTGCAGTCCTGGCCGCGGAGCACGCCCCATCCCTTCACTaGATGTTTACATTAACAAAC +
Preference number: 4 (lower is better)
Translates to: PRVPKEGAGHGAVLAAEHAPSLH*MFTLTN
Trigger: GTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGC...GTGCTCCGCGGCCAGGACTGCACCATGACCTGCGCCTTCCTTGGGAACCCGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp CGGGTTCCCAAGGAAGGCGCAGGTCATGGTGCAGTCCTGGCCGCGGAGCACCGTTTAATCTTAAGCGTGTaGGTCAGACCATCTTCGGAC +
Preference number: 4 (lower is better)
Translates to: RVPKEGAGHGAVLAAEHRLILSV*VRPSSD
Trigger: GTCCGAAGATGGTCTGACGCACACGCTTAAGATTAA...ACGGTGCTCCGCGGCCAGGACTGCACCATGACCTGCGCCTTCCTTGGGAACCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp CTTATCATCTTTGTCATAGACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGGGAGATGGTGAGCAGTaGCTGGTCTTCCCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: LIIFVIDGERAAAAVLAQGDGEQ*LVFPAL
Trigger: GAGCGCGGGGAAGACCAGGCACTGCTCACCATCTCC...CTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGTCTATGACAAAGATGATAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTGGCTCAGCTAGTGCCTaGACTGTAGGGTGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: GLWFQVRVTVLGTSSNNRGSASA*TVGWPV
Trigger: GACGGGCCACCCTACAGTCCAGGCACTAGCTGAGCC...ACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGAGGAGATGTGGGGTTTaGCGTTCCCCTGCACCCGGG +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWRRCGV*RSPAPG
Trigger: CCCGGGTGCAGGGGAACGCCAAACCCCACATCTCCT...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATCTGGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACAGCTGGGCTCCCAGTaGCCGCGTGCACGTCGGACA +
Preference number: 4 (lower is better)
Translates to: IWAVVPGQSHCVGDFLKQQLGSQ*PRARRT
Trigger: TGTCCGACGTGCACGCGGCCACTGGGAGCCCAGCTG...TTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GCACACGCCGCTGGTGGAGTTGTACCAGAACTTGGAGTTGGCCGTGATGTTGACGGTGCAGAGTGGCCGTaGCTGAGCCGTGGTCATTCT +
Preference number: 4 (lower is better)
Translates to: AHAAGGVVPELGVGRDVDGAEWP*LSRGHS
Trigger: AGAATGACCACGGCTCAGCCACGGCCACTCTGCACC...GTCAACATCACGGCCAACTCCAAGTTCTGGTACAACTCCACCAGCGGCGTGTGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp ATCATCTTTGTCATAGACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGCTCGGGGTCCTTGTTGACTaGCACCCACAGGTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: IIFVIDGERAAAAVLAQLGVLVD*HPQVAA
Trigger: GGCAGCAACCTGTGGGTGCCAGTCAACAAGGACCCC...GAGCTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGTCTATGACAAAGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GTCCTTCTTCTCGTAGGGCTTGAGCTTGGCGCTCAGGTCCTGGATCTGGTCCTTGATGTAGCCAGAGGGTaGGTCTCCCTCTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: VLLLVGLELGAQVLDLVLDVARG*VSLCRL
Trigger: GAGCCTGCAGAGGGAGACCCACCCTCTGGCTACATC...AAGGACCAGATCCAGGACCTGAGCGCCAAGCTCAAGCCCTACGAGAAGAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GTCGCCCTTGTAGAGGGTCACTGTGGGCCGCGGGTTCCCAAGGAAGGCGCAGGTTCAGAGTCACTGTGTTaGGGACTTCCTCAAACAACC +
Preference number: 4 (lower is better)
Translates to: VALVEGHCGPRVPKEGAGSESLC*GLPQTT
Trigger: GGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGA...ACCTGCGCCTTCCTTGGGAACCCGCGGCCCACAGTGACCCTCTACAAGGGCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GCACACGCCGCTGGTGGAGTTGTACCAGAACTTGGAGTTGGCCGTGATGTTGACCTGCCGTGTACCAGGTaGCTGTGCTTGCATCCCGCT +
Preference number: 4 (lower is better)
Translates to: AHAAGGVVPELGVGRDVDLPCTR*LCLHPA
Trigger: AGCGGGATGCAAGCACAGCCACCTGGTACACGGCAG...GTCAACATCACGGCCAACTCCAAGTTCTGGTACAACTCCACCAGCGGCGTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp GCCGAGGGAAATCTGCCACGCGCACATGGATGTCATAGCGTGCTTCTCCAAACTGGATGGGGTCCTTGTTaGCTGGCACCCACAGGTTGC +
Preference number: 4 (lower is better)
Translates to: AEGNLPRAHGCHSVLLQTGWGPC*LAPTGC
Trigger: GCAACCTGTGGGTGCCAGTCAACAAGGACCCCATCC...AGTTTGGAGAAGCACGCTATGACATCCATGTGCGCGTGGCAGATTTCCCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp GTCCTTCTTCTCGTAGGGCTTGAGCTTGGCGCTCAGGTCCTGGATCTGGTCCTTTCTTCTCGTAGGGCTTaGGCTTGGCGCTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: VLLLVGLELGAQVLDLVLSSRRA*AWRSGP
Trigger: AGGACCTGAGCGCCAAGCTCAAGCCCTACGAGAAGA...AAGGACCAGATCCAGGACCTGAGCGCCAAGCTCAAGCCCTACGAGAAGAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp CCCGTCACTGTGTACTTGTTGCTGAAGACACGCTCGGCTGCCGTGTACCAGGTGATCATAACAGCCTCCTaGTGCCTGGGCTTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PVTVYLLLKTRSAAVYQVIITAS*CLGLAG
Trigger: TCCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGAT...CACCTGGTACACGGCAGCCGAGCGTGTCTTCAGCAACAAGTACACAGTGACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp GGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTCCCGGAATGTGTACTTaGCCTCGTGCTCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GLWFQVRVTVLGTSSNNRPGMCT*PRAQGP
Trigger: TGGGCCCTGAGCACGAGGGCAAGTACACATTCCGGG...ACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp GGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTGAAGACACGCTCGGCTaGCGTGTACCAGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GLWFQVRVTVLGTSSNNREDTLG*RVPGGC
Trigger: ACAGCCACCTGGTACACGGCAGCCGAGCGTGTCTTC...ACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp ATCATCTTTGTCATAGACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGCTCAAGGGGACCTTGATGTaGGCCGTGTGGCCTACCTTC +
Preference number: 4 (lower is better)
Translates to: IIFVIDGERAAAAVLAQLKGTLM*AVWPTF
Trigger: GAAGGTAGGCCACACGGCCCACATCAAGGTCCCCTT...GAGCTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGTCTATGACAAAGATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGAATGTAGCCGAGCACTaGGGCTCCCCCATCCTGGGT +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWNVAEH*GSPILG
Trigger: ACCCAGGATGGGGGAGCCCCAGTGCTCGGCTACATT...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGGGGGTCCTTGTTGACTaGCACCCACAGGTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWGVLVD*HPQVAA
Trigger: GGCAGCAACCTGTGGGTGCCAGTCAACAAGGACCCC...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATCATCTTTGTCATAGACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGCTCTCTCTCGGCCCTTGGTaGGAACGCCATCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: IIFVIDGERAAAAVLAQLSLGPW*ERHLSA
Trigger: GGCAGAAAGATGGCGTTCCCACCAAGGGCCGAGAGA...GAGCTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGTCTATGACAAAGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTTGTAGAGGGTCACTGTaGGCCGCGGGTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: GLWFQVRVTVLGTSSNNRCRGSL*AAGSQG
Trigger: TCCTTGGGAACCCGCGGCCCACAGTGACCCTCTACA...ACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp ATCATCTTTGTCATAGACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGCTCCCTTTGCCCCAACAGTaGGGCTACCAGTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: IIFVIDGERAAAAVLAQLPLPQQ*GYQCHL
Trigger: CAGATGACACTGGTAGCCTCACTGTTGGGGCAAAGG...GAGCTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGTCTATGACAAAGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp GTCCTTCTTCTCGTAGGGCTTGAGCTTGGCGCTCAGGTCCTGGATCTGGTCCTTGGATGCGGTCAACAGTaGGCTGGGCCTTTTGTACCA +
Preference number: 4 (lower is better)
Translates to: VLLLVGLELGAQVLDLVLGCGQQ*AGPFVP
Trigger: TGGTACAAAAGGCCCAGCTCACTGTTGACCGCATCC...AAGGACCAGATCCAGGACCTGAGCGCCAAGCTCAAGCCCTACGAGAAGAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp AGTGAGCCTCACCGTCCTCCTGCACATCTGGGCTGTGGTTCCAGGTCAGAGTCACCATACTGGGAAAGATaGGCTTGTGCACTGCACCCT +
Preference number: 4 (lower is better)
Translates to: SEPHRPPAHLGCGSRSESPYWER*ACALHP
Trigger: AGGGTGCAGTGCACAAGCTCATCTTTCCCAGTATGG...TGACTCTGACCTGGAACCACAGCCCAGATGTGCAGGAGGACGGTGAGGCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGCACAGTTGGAGATGGTaGGCAGTGCCTGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWHSWRW*AVPGLP
Trigger: GGGAAGACCAGGCACTGCTCACCATCTCCAACTGTG...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp ACACGCTCGGCTGCCGTGTACCAGGTGGCTGTGCTTGCATCCCGCTTCATGATGTTGTGCACTGCACCCTaGTTCACAATCTGCATGCCT +
Preference number: 4 (lower is better)
Translates to: TRSAAVYQVAVLASRFMMLCTAP*FTICMP
Trigger: AGGCATGCAGATTGTGAAGCAGGGTGCAGTGCACAA...CATCATGAAGCGGGATGCAAGCACAGCCACCTGGTACACGGCAGCCGAGCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp GCTGGAGCTCACATGAGGTGCTTTGATTTCTTCTGCAGACTCTCGGTGATGGATAGGCGCAGGTCATGGTaGAGTCCTGGCCGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: AGAHMRCFDFFCRLSVMDRRRSW*SPGRGA
Trigger: TGCTCCGCGGCCAGGACTGCACCATGACCTGCGCCT...ATCCATCACCGAGAGTCTGCAGAAGAAATCAAAGCACCTCATGTGAGCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGCTCTTCCAGGAGATGTaGGGTTTGGCGTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWLFQEM*GLAFPC
Trigger: GCAGGGGAACGCCAAACCCCACATCTCCTGGAAGAG...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp GTCCTTCTTCTCGTAGGGCTTGAGCTTGGCGCTCAGGTCCTGGATCTGGTCCTTTCTTCTGCTTCTTCTTaGGAGCAGGGGGTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: VLLLVGLELGAQVLDLVLSSASS*EQGVPS
Trigger: AGAGGGCACCCCCTGCTCCCAAGAAGAAGCAGAAGA...AAGGACCAGATCCAGGACCTGAGCGCCAAGCTCAAGCCCTACGAGAAGAAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTGGTCTCCATCCTGCATaGCCACCACAGTGTACTCGC +
Preference number: 4 (lower is better)
Translates to: GLWFQVRVTVLGTSSNNRGLHPA*PPQCTR
Trigger: GCGAGTACACTGTGGTGGCCATGCAGGATGGAGACC...ACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGGCCGTGGCTGAGCCGTaGTCATTCTTGAGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWAVAEP*SFLSLS
Trigger: GCTCAAGCTCAAGAATGACCACGGCTCAGCCACGGC...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATCTGGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAAGCCCTGGTGGTGGCATaGCACGGACCCCCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: IWAVVPGQSHCVGDFLKQALVVA*HGPPCL
Trigger: TAGACAAGGGGGTCCGTGCCATGCCACCACCAGGGC...TTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGCCCCCTCGGGCGCGGTaGCCGGTTGAGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWPPRAR*PVEASP
Trigger: TGGAGAAGCCTCAACCGGTCACCGCGCCCGAGGGGG...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp GCTGGAGCTCACATGAGGTGCTTTGATTTCTTCTGCAGACTCTCGGTGATGGATTCTTGGCGGACTCCTTaGTGGGGATGCCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: AGAHMRCFDFFCRLSVMDSWRTP*WGCRSP
Trigger: GGGAGAGCGGCATCCCCATCAAGGAGTCCGCCAAGA...ATCCATCACCGAGAGTCTGCAGAAGAAATCAAAGCACCTCATGTGAGCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp GAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGAGCTCACATATCCTTGGCCACTACTaGGCTGGATGGCACACTGGG +
Preference number: 4 (lower is better)
Translates to: ETPHHNSLLMPGLGWSSHILGHY*AGWHTG
Trigger: CCCAGTGTGCCATCCAGCTCAGTAGTGGCCAAGGAT...ATGTGAGCTCCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp GCACACGCCGCTGGTGGAGTTGTACCAGAACTTGGAGTTGGCCGTGATGTTGACCTGTACTTAGTGCCATaGATCAGCAGCTGCCCATCC +
Preference number: 4 (lower is better)
Translates to: AHAAGGVVPELGVGRDVDLYLVP*ISSCPS
Trigger: GGATGGGCAGCTGCTGATGCATGGCACTAAGTACAG...GTCAACATCACGGCCAACTCCAAGTTCTGGTACAACTCCACCAGCGGCGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp GCACACGCCGCTGGTGGAGTTGTACCAGAACTTGGAGTTGGCCGTGATGTTGACTCAGCTCTGCTCGCTTaGCCTCATGGTTCATGCTGT +
Preference number: 4 (lower is better)
Translates to: AHAAGGVVPELGVGRDVDSALLA*PHGSCC
Trigger: ACAGCATGAACCATGAGGGCAAGCGAGCAGAGCTGA...GTCAACATCACGGCCAACTCCAAGTTCTGGTACAACTCCACCAGCGGCGTGTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp ACGCCGCTGGTGGAGTTGTACCAGAACTTGGAGTTGGCCGTGATGTTGACGTCGGAGGAATCAGATACATaGAGGTCCTGGACCAGGCCT +
Preference number: 4 (lower is better)
Translates to: TPLVELYQNLELAVMLTSEESDT*RSWTRP
Trigger: AGGCCTGGTCCAGGACCTGCATGTATCTGATTCCTC...CGACGTCAACATCACGGCCAACTCCAAGTTCTGGTACAACTCCACCAGCGGCGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGGCCAGGCCAGGGAAATaGTGGAGTTGGAGGAATCAG +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWARPGK*WSWRNQ
Trigger: CTGATTCCTCCAACTCCAGCATTTCCCTGGCCTGGC...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp CAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTAGGTTTGTGGGGGCCTGGACTGTAGGGTaGCCCGTCTCCTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: QVRVTVLGTSSNNRRFVGAWTVG*PVSFFL
Trigger: AAGGAAGAAGGAGACGGGCCACCCTACAGTCCAGGC...CCCCACAAACCTACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GCCGAGGGAAATCTGCCACGCGCACATGGATGTCATAGCGTGCTTCTCCAAACTGTCATCCGAAGTCAGTaGCTCCAGCTTCAGCACGTG +
Preference number: 4 (lower is better)
Translates to: AEGNLPRAHGCHSVLLQTVIRSQ*LQLQHV
Trigger: CACGTGCTGAAGCTGGAGCCACTGACTTCGGATGAC...AGTTTGGAGAAGCACGCTATGACATCCATGTGCGCGTGGCAGATTTCCCTCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGCACTTTCCGTGCCCTTaGCCCGGAATGTGTACTTGC +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWHFPCP*PGMCTC
Trigger: GCAAGTACACATTCCGGGCCAAGGGCACGGAAAGTG...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp GCACACGCCGCTGGTGGAGTTGTACCAGAACTTGGAGTTGGCCGTGATGTTGACTTGATGTGGGCCGTGTaGCCTACCTTCACAGTGATG +
Preference number: 4 (lower is better)
Translates to: AHAAGGVVPELGVGRDVDLMWAV*PTFTVM
Trigger: CATCACTGTGAAGGTAGGCCACACGGCCCACATCAA...GTCAACATCACGGCCAACTCCAAGTTCTGGTACAACTCCACCAGCGGCGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp CAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTAGGTTTGTGGGGGCCGTGGCTGAGCCGTaGTCATTCTTGAGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: QVRVTVLGTSSNNRRFVGAVAEP*SFLSLS
Trigger: GCTCAAGCTCAAGAATGACCACGGCTCAGCCACGGC...CCCCACAAACCTACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGTGCACACGCCGCTGGTaGAGTTGTACCAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWCTRRW*SCTRTW
Trigger: CCAAGTTCTGGTACAACTCCACCAGCGGCGTGTGCA...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp CAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTAGGTTTGTGGGGGGGTGCACACGCCGCTaGTGGAGTTGTACCAGAACT +
Preference number: 4 (lower is better)
Translates to: QVRVTVLGTSSNNRRFVGGCTRR*WSCTRT
Trigger: AGTTCTGGTACAACTCCACCAGCGGCGTGTGCACCC...CCCCACAAACCTACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTATGCCTGGGCTTGGCTaGAGCTCACATGAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: GLWFQVRVTVLGTSSNNRMPGLG*SSHEVL
Trigger: AAGCACCTCATGTGAGCTCCAGCCAAGCCCAGGCAT...ACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp CATGATGATGTAGTGAGCCTCACCGTCCTCCTGCACATCTGGGCTGTGGTTCCATCCGGGTCACTAAGCTaGAGAACTCCACTATGCTCG +
Preference number: 4 (lower is better)
Translates to: HDDVVSLTVLLHIWAVVPSGSLS*RTPLCS
Trigger: CGAGCATAGTGGAGTTCTTCAGCTTAGTGACCCGGA...TGGAACCACAGCCCAGATGTGCAGGAGGACGGTGAGGCTCACTACATCATCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp GAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGAGCTCACATGACGCTCCTCCACAGTaGCGATGGCAGTACTGTAGT +
Preference number: 4 (lower is better)
Translates to: ETPHHNSLLMPGLGWSSHDAPPQ*RWQYCS
Trigger: ACTACAGTACTGCCATCGTCACTGTGGAGGAGCGTC...ATGTGAGCTCCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGTGTGTAGCAGGTGCCTaGGATGGGGATCTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWCVAGA*DGDLCA
Trigger: TGCACAAAGATCCCCATCTCAGGCACCTGCTACACA...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGCACCGTGTGTGGCTTaGGGGGCGTCACGAAGCGCG +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWAAPCVA*GASRSA
Trigger: CGCGCTTCGTGACGCCCCTCAAGCCACACACGGTGC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp GAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGAGCTCACATCTCACACTCCAGGCATaGGCGACTCCTCTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: ETPHHNSLLMPGLGWSSHLTLQA*ATPLFH
Trigger: GTGAAAGAGAGGAGTCGCGCATGCCTGGAGTGTGAG...ATGTGAGCTCCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGCTCCCAGTGGCCGCGTaGACGTCGGACATCCCGCTC +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWLPVAA*TSDIPL
Trigger: GAGCGGGATGTCCGACGTGCACGCGGCCACTGGGAG...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp GTCCTTCTTCTCGTAGGGCTTGAGCTTGGCGCTCAGGTCCTGGATCTGGTCCTTGTACTGGATCCTCAGTaGCTCAGTACCCTTGATCCA +
Preference number: 4 (lower is better)
Translates to: VLLLVGLELGAQVLDLVLVLDPQ*LSTLDP
Trigger: TGGATCAAGGGTACTGAGCCACTGAGGATCCAGTAC...AAGGACCAGATCCAGGACCTGAGCGCCAAGCTCAAGCCCTACGAGAAGAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GCCGAGGGAAATCTGCCACGCGCACATGGATGTCATAGCGTGCTTCTCCAAACTTCCCAGGAACTTCAGTaGCTCATCCAGCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: AEGNLPRAHGCHSVLLQTSQELQ*LIQHCE
Trigger: CTCACAGTGCTGGATGAGCCACTGAAGTTCCTGGGA...AGTTTGGAGAAGCACGCTATGACATCCATGTGCGCGTGGCAGATTTCCCTCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp GCCGAGGGAAATCTGCCACGCGCACATGGATGTCATAGCGTGCTTCTCCAAACTCGGTCAACAGTGAGCTaGGCCTTTTGTACCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AEGNLPRAHGCHSVLLQTRSTVS*AFCTRF
Trigger: GAACCTGGTACAAAAGGCCCAGCTCACTGTTGACCG...AGTTTGGAGAAGCACGCTATGACATCCATGTGCGCGTGGCAGATTTCCCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp ACGCCGCTGGTGGAGTTGTACCAGAACTTGGAGTTGGCCGTGATGTTGACGTCGGCAGTGTCACATCCTTaGATGTCAGCTCACACTCCA +
Preference number: 4 (lower is better)
Translates to: TPLVELYQNLELAVMLTSAVSHP*MSAHTP
Trigger: TGGAGTGTGAGCTGACATCCAAGGATGTGACACTGC...CGACGTCAACATCACGGCCAACTCCAAGTTCTGGTACAACTCCACCAGCGGCGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGTTGATGTGGGCCGTGTaGCCTACCTTCACAGTGATG +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWLMWAV*PTFTVM
Trigger: CATCACTGTGAAGGTAGGCCACACGGCCCACATCAA...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp CTTATCATCTTTGTCATAGACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGGTCCCTGGAGTCAAGTaGCTCACTGTCACCGATTTC +
Preference number: 4 (lower is better)
Translates to: LIIFVIDGERAAAAVLAQVPGVK*LTVTDF
Trigger: GAAATCGGTGACAGTGAGCCACTTGACTCCAGGGAC...CTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGTCTATGACAAAGATGATAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp AGCGTGCTTCTCCAAACTCATTCTGAAGCAAGATTCGGTACACCCCTGAGTCAGCAGCCTCCTGATGCCTaGGCTTGGCTGGAGCTCACA +
Preference number: 4 (lower is better)
Translates to: SVLLQTHSEARFGTPLSQQPPDA*AWLELT
Trigger: TGTGAGCTCCAGCCAAGCCCAGGCATCAGGAGGCTG...CTGACTCAGGGGTGTACCGAATCTTGCTTCAGAATGAGTTTGGAGAAGCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
3UTR CAA 72 bp ACATCTGGGCTGTGGTTCCAGGTCAGAGTCACTGTGTaGGGGACTTCCTCAAACAACCGTAGGTTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TSGLWFQVRVTV*GTSSNNRRFVG
Trigger: CCCCACAAACCTACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCCAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAGCGTGCAGGTGGGGATaGCGAGGGTGCACACGCCGC +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRAACRWG*RGCTRR
Trigger: GCGGCGTGTGCACCCTCGTCATCCCCACCTGCACGC...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGTACTTGGTGCCCATCTaGTTCACATCGTACTTGCCC +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWYLVPI*FTSYLP
Trigger: GGGCAAGTACGATGTGAAGCAGATGGGCACCAAGTA...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp ATCTGGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACAGCACTGTGAGCTCTaGACTCATCCGCTTATCGCC +
Preference number: 4 (lower is better)
Translates to: IWAVVPGQSHCVGDFLKQQHCEL*THPLIA
Trigger: GGCGATAAGCGGATGAGTGCAGAGCTCACAGTGCTG...TTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp AGCGTGCTTCTCCAAACTCATTCTGAAGCAAGATTCGGTACACCCCTGAGTCAGCCATGCATCAGCAGCTaGCCATCCTTCTTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: SVLLQTHSEARFGTPLSQPCISS*PSFFQR
Trigger: GCGCTGGAAGAAGGATGGGCAGCTGCTGATGCATGG...CTGACTCAGGGGTGTACCGAATCTTGCTTCAGAATGAGTTTGGAGAAGCACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp GCCGAGGGAAATCTGCCACGCGCACATGGATGTCATAGCGTGCTTCTCCAAACTCTCAATGATCAGCTCTaGTCGCTTGCCCTCATGGTT +
Preference number: 4 (lower is better)
Translates to: AEGNLPRAHGCHSVLLQTLNDQL*SLALMV
Trigger: AACCATGAGGGCAAGCGAGCAGAGCTGATCATTGAG...AGTTTGGAGAAGCACGCTATGACATCCATGTGCGCGTGGCAGATTTCCCTCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGTTGTGCACTGCACCCTaGTTCACAATCTGCATGCCT +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWLCTAP*FTICMP
Trigger: AGGCATGCAGATTGTGAAGCAGGGTGCAGTGCACAA...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGGATGAGCTTGTGCACTaGACCCTGCTTCACAATCTG +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWDELVH*TLLHNL
Trigger: CAGATTGTGAAGCAGGGTGCAGTGCACAAGCTCATC...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGGGGCTGTCCAGGGCCTaGCTTATTTACAGCTATAAC +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWGLSRA*LIYSYN
Trigger: GTTATAGCTGTAAATAAGGCAGGCCCTGGACAGCCC...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTAGGCGCAGGTCATGGTaGAGTCCTGGCCGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWARRRSW*SPGRGA
Trigger: TGCTCCGCGGCCAGGACTGCACCATGACCTGCGCCT...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp AGGGAAATCTGCCACGCGCACATGGATGTCATAGCGTGCTTCTCCAAACTCATTCTCTTCCAGGAGATGTaGGGTTTGGCGTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: REICHAHMDVIACFSKLILFQEM*GLAFPC
Trigger: GCAGGGGAACGCCAAACCCCACATCTCCTGGAAGAG...AATGAGTTTGGAGAAGCACGCTATGACATCCATGTGCGCGTGGCAGATTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGTCAAACACAGCTGTCTaGCGCTCTGTCACCTTCACA +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWSNTAV*RSVTFT
Trigger: TGTGAAGGTGACAGAGCGCCAGACAGCTGTGTTTGA...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp CTTATCATCTTTGTCATAGACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGCACAATCTGCATGCCTaGCAAGTCCGTGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: LIIFVIDGERAAAAVLAQHNLHA*QVRDLL
Trigger: AAGGAGATCACGGACTTGCCAGGCATGCAGATTGTG...CTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGTCTATGACAAAGATGATAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp CATGATGATGTAGTGAGCCTCACCGTCCTCCTGCACATCTGGGCTGTGGTTCCATGTACCATGTCACTTTaGGCAGTGGTTTTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: HDDVVSLTVLLHIWAVVPCTMSL*AVVFPG
Trigger: TCCGGGGAAAACCACTGCCCAAAGTGACATGGTACA...TGGAACCACAGCCCAGATGTGCAGGAGGACGGTGAGGCTCACTACATCATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGCTTCCCCGCGCTCCATaGACACGCGTTCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWLPRAP*TRVPPP
Trigger: CGGAGGAGGAACGCGTGTCCATGGAGCGCGGGGAAG...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TGCCACGCGCACATGGATGTCATAGCGTGCTTCTCCAAACTCATTCTGAAGCAAGTCCTCCTGCACATCTaGGCTGTGGTTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: CHAHMDVIACFSKLILKQVLLHI*AVVPGQ
Trigger: CTGACCTGGAACCACAGCCCAGATGTGCAGGAGGAC...TTGCTTCAGAATGAGTTTGGAGAAGCACGCTATGACATCCATGTGCGCGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGGAAGGCGCAGGTCATaGTGCAGTCCTGGCCGCGGA +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWAGRRRS*CSPGRG
Trigger: TCCGCGGCCAGGACTGCACCATGACCTGCGCCTTCC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTCTCCACCCGGCCCTGTaGAGGCTTTGGACGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWALHPAL*RLWTVQ
Trigger: CTGGACCGTCCAAAGCCTCCACAGGGCCGGGTGGAG...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR CCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGTCCACCATTGTCCTTTaGGGCCTTCCACTTCATGTG +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWSTIVL*GLPLHV
Trigger: CACATGAAGTGGAAGGCCCCAAAGGACAATGGTGGA...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR CCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGGGTGCAGCTGGTGGTaGCATGGCACGGACCCCCTT +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWAGCSWW*HGTDPL
Trigger: AAGGGGGTCCGTGCCATGCCACCACCAGCTGCACCC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR CCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGCTTGGGTGCAGCTGGTaGTGGCATGGCACGGACCCC +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWLGCSW*WHGTDP
Trigger: GGGGTCCGTGCCATGCCACCACCAGCTGCACCCAAG...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR TCA 90 bp AGGGAAATCTGCCACGCGCACATGGATGTCATAGCGTGCTTCTCCAAACTCATTGCCCCCGAAAGTCGGTaGAACCATACTCCATGCACA +
Preference number: 4 (lower is better)
Translates to: REICHAHMDVIACFSKLIAPESR*NHTPCT
Trigger: TGTGCATGGAGTATGGTTTCACCGACTTTCGGGGGC...AATGAGTTTGGAGAAGCACGCTATGACATCCATGTGCGCGTGGCAGATTTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGGCCTACCTTCACAGTaGTGGCGTGCGCAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWGLPSQ*WRAQPV
Trigger: CACTGGCTGCGCACGCCATCACTGTGAAGGTAGGCC...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp ATCATCTTTGTCATAGACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGCTCTCACATGAGGTGCTTTaGTTTCTTCTGCAGACTCTC +
Preference number: 4 (lower is better)
Translates to: IIFVIDGERAAAAVLAQLSHEVL*FLLQTL
Trigger: GAGAGTCTGCAGAAGAAATCAAAGCACCTCATGTGA...GAGCTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGTCTATGACAAAGATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGTCACACCTTCTGAATTaGCTGCCAGGATACGGAACT +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWSHLLN*LPGYGT
Trigger: AGTTCCGTATCCTGGCAGTCAATTCAGAAGGTGTGA...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR GCA 90 bp ACACGCTCGGCTGCCGTGTACCAGGTGGCTGTGCTTGCATCCCGCTTCATGATGGGTCATTGCTTGCAATaGACTTATAGTTGTCAGAGT +
Preference number: 4 (lower is better)
Translates to: TRSAAVYQVAVLASRFMMGHCLQ*TYSCQS
Trigger: ACTCTGACAACTATAAGTGCATTGCAAGCAATGACC...CATCATGAAGCGGGATGCAAGCACAGCCACCTGGTACACGGCAGCCGAGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp AGTGAGCCTCACCGTCCTCCTGCACATCTGGGCTGTGGTTCCAGGTCAGAGTCAGGTATAGATGGCATCTaGATGGTCATTGCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: SEPHRPPAHLGCGSRSESGIDGI*MVIACN
Trigger: ATTGCAAGCAATGACCATGCAGATGCCATCTATACC...TGACTCTGACCTGGAACCACAGCCCAGATGTGCAGGAGGACGGTGAGGCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp GGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTACCATCACTGAGCTGTaGATCCTCAATGATCAGCTC +
Preference number: 4 (lower is better)
Translates to: GLWFQVRVTVLGTSSNNRTITEL*ILNDQL
Trigger: GAGCTGATCATTGAGGATGCACAGCTCAGTGATGGT...ACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGGAGATGGTGAGCAGTaGCTGGTCTTCCCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWGDGEQ*LVFPAL
Trigger: GAGCGCGGGGAAGACCAGGCACTGCTCACCATCTCC...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp GGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTACTGTGGTGTCAACCTTaGTCTCTTTGTCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GCGSRSESLCWGLPQTTVLWCQP*SLCLPG
Trigger: CCCTGGAAGACAAAGAGACCAAGGTTGACACCACAG...TACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp TCCTCCTGCACATCTGGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTAGTCAAAGACCACTGTaGTGTCAACCTTGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: SSCTSGLWFQVRVTVLGTSQRPL*CQPWSL
Trigger: AAGAGACCAAGGTTGACACCACAGTGGTCTTTGACT...AGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCCAGATGTGCAGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp AGCGTGCTTCTCCAAACTCATTCTGAAGCAAGATTCGGTACACCCCTGAGTCAGCACTTTCCGTGCCCTTaGCCCGGAATGTGTACTTGC +
Preference number: 4 (lower is better)
Translates to: SVLLQTHSEARFGTPLSQHFPCP*PGMCTC
Trigger: GCAAGTACACATTCCGGGCCAAGGGCACGGAAAGTG...CTGACTCAGGGGTGTACCGAATCTTGCTTCAGAATGAGTTTGGAGAAGCACGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGTCATGGTGCAGTCCTaGCCGCGGAGCACCGTGTGT +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWAVMVQS*PRSTVC
Trigger: ACACACGGTGCTCCGCGGCCAGGACTGCACCATGAC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp GCTGGAGCTCACATGAGGTGCTTTGATTTCTTCTGCAGACTCTCGGTGATGGATAGCATCTGCCGGCTGTaGATGGTTGTCATGGTGACA +
Preference number: 4 (lower is better)
Translates to: AGAHMRCFDFFCRLSVMDSICRL*MVVMVT
Trigger: TGTCACCATGACAACCATTCACAGCCGGCAGATGCT...ATCCATCACCGAGAGTCTGCAGAAGAAATCAAAGCACCTCATGTGAGCTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp TTCTTCTGCAGACTCTCGGTGATGGATGCTACAACTGACTTATCATCTTTGTCAGGCGCGGTGACCGGTTaGGGCTTCTCCACGAACTCA +
Preference number: 4 (lower is better)
Translates to: FFCRLSVMDATTDLSSLSGAVTG*GFSTNS
Trigger: TGAGTTCGTGGAGAAGCCTCAACCGGTCACCGCGCC...TGACAAAGATGATAAGTCAGTTGTAGCATCCATCACCGAGAGTCTGCAGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCACCCGGAAGGGGACCTTaGTGTGGGCCGTGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRAPGRGP*CGPCGL
Trigger: TAGGCCACACGGCCCACATCAAGGTCCCCTTCCGGG...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp TGCCACGCGCACATGGATGTCATAGCGTGCTTCTCCAAACTCATTCTGAAGCAAATTTCTGCCTCTCGATaGGTCCTCCCACTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: CHAHMDVIACFSKLILKQISASR*VLPLCS
Trigger: GCTACACAGTGGGAGGACTCATCGAGAGGCAGAAAT...TTGCTTCAGAATGAGTTTGGAGAAGCACGCTATGACATCCATGTGCGCGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp CTTATCATCTTTGTCATAGACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGTCTCCAAACTCATTCTaGAGCAAGATTCGGTACACC +
Preference number: 4 (lower is better)
Translates to: LIIFVIDGERAAAAVLAQSPNSF*SKIRYT
Trigger: GGTGTACCGAATCTTGCTTCAGAATGAGTTTGGAGA...CTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGTCTATGACAAAGATGATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGTCACATGAGGTGCTTTaGTTTCTTCTGCAGACTCTC +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWSHEVL*FLLQTL
Trigger: GAGAGTCTGCAGAAGAAATCAAAGCACCTCATGTGA...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTCACGTCAGGTGGTGGTaGGCCAGAGAAGGCTGCATG +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWAHVRWW*AREGCM
Trigger: CATGCAGCCTTCTCTGGCTCACCACCACCTGACGTG...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR GCA 90 bp TGCCACGCGCACATGGATGTCATAGCGTGCTTCTCCAAACTCATTCTGAAGCAACTCCCAACACTCGAATaGTGTGTCCACGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: CHAHMDVIACFSKLILKQLPTLE*CVHGFG
Trigger: TCCAAAGCCGTGGACACAGCATTCGAGTGTTGGGAG...TTGCTTCAGAATGAGTTTGGAGAAGCACGCTATGACATCCATGTGCGCGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp ATCTGGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAATTTGCCACCTTCTTCTaGTTCTTCTTGGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: IWAVVPGQSHCVGDFLKQFATFF*FFLGAG
Trigger: CCCTGCTCCCAAGAAGAAGCAGAAGAAGGTGGCAAA...TTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGACTCCCAGTGGCCGCGTaGACGTCGGACATCCCGCTC +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRLPVAA*TSDIPL
Trigger: GAGCGGGATGTCCGACGTGCACGCGGCCACTGGGAG...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp GCTGGAGCTCACATGAGGTGCTTTGATTTCTTCTGCAGACTCTCGGTGATGGATCTGGCACCCACAGGTTaGTGCCTTTCTTCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: AGAHMRCFDFFCRLSVMDLAPTG*CLSSFV
Trigger: AACGAAGGAAGAAAGGCAGCAACCTGTGGGTGCCAG...ATCCATCACCGAGAGTCTGCAGAAGAAATCAAAGCACCTCATGTGAGCTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACGGGTGGGTCTCCCTCTaGAGGCTCCCGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHGWVSL*RLPPGQ
Trigger: CTGGCCTGGCGGGAGCCTGCAGAGGGAGACCCACCC...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp AGGGAAATCTGCCACGCGCACATGGATGTCATAGCGTGCTTCTCCAAACTCATTGGAACGCCATCTTTCTaGCAGATCACGTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: REICHAHMDVIACFSKLIGTPSF*QITSGG
Trigger: ACCACCTGACGTGATCTGGCAGAAAGATGGCGTTCC...AATGAGTTTGGAGAAGCACGCTATGACATCCATGTGCGCGTGGCAGATTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGAGCTGCTGCGGTCCTTaGCCAGCTCGTTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWSCCGP*PARSPP
Trigger: TGGTGGAGAACGAGCTGGGCAAGGACCGCAGCAGCT...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTAGCTGCTGCGGTCCTTaGCCAGCTCGTTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWASCCGP*PARSPP
Trigger: TGGTGGAGAACGAGCTGGGCAAGGACCGCAGCAGCT...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGGGAGCTCACATGAGGTaGTTTGATTTCTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWGAHMR*FDFFCR
Trigger: TCTGCAGAAGAAATCAAAGCACCTCATGTGAGCTCC...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGGAGATACGGTATAGATaGCATCTGCATGGTCATTGC +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWEIRYR*HLHGHC
Trigger: GCAATGACCATGCAGATGCCATCTATACCGTATCTC...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ACGCCGCTGGTGGAGTTGTACCAGAACTTGGAGTTGGCCGTGATGTTGACGTCGCTTTCTTGGGCACTTTaGACAAAATCTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: TPLVELYQNLELAVMLTSLSWAL*TKSPAS
Trigger: AGATGCTGGAGATTTTGTCCAAAGTGCCCAAGAAAG...CGACGTCAACATCACGGCCAACTCCAAGTTCTGGTACAACTCCACCAGCGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGTCCCGCTCTTCACTGTaGCCAGACGCTCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWSRSSL*PDAPPQ
Trigger: CTGTGGAGGAGCGTCTGGCCACAGTGAAGAGCGGGA...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGACAGCTGGGCTCCCAGTaGCCGCGTGCACGTCGGACA +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRQLGSQ*PRARRT
Trigger: TGTCCGACGTGCACGCGGCCACTGGGAGCCCAGCTG...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGGGATCTTTGTGCACTTaGACCACTCCTTTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWGSLCT*TTPLCL
Trigger: AAGACACAAAGGAGTGGTCCAAGTGCACAAAGATCC...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTTGTAGAGGGTCACTGTaGGCCGCGGGTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWACRGSL*AAGSQG
Trigger: TCCTTGGGAACCCGCGGCCCACAGTGACCCTCTACA...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTCAGCTGGTGGTGGCATaGCACGGACCCCCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWAQLVVA*HGPPCL
Trigger: TAGACAAGGGGGTCCGTGCCATGCCACCACCAGCTG...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR TCA 90 bp TTCTTCTGCAGACTCTCGGTGATGGATGCTACAACTGACTTATCATCTTTGTCACAGAGTGGCCGTGGCTaGGCCGTGGTCATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: FFCRLSVMDATTDLSSLSQSGRG*AVVILE
Trigger: CTCAAGAATGACCACGGCTCAGCCACGGCCACTCTG...TGACAAAGATGATAAGTCAGTTGTAGCATCCATCACCGAGAGTCTGCAGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTTCTTCTCGTAGGGCTTaGGCTTGGCGCTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWASSRRA*AWRSGP
Trigger: AGGACCTGAGCGCCAAGCTCAAGCCCTACGAGAAGA...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp AGCGTGCTTCTCCAAACTCATTCTGAAGCAAGATTCGGTACACCCCTGAGTCAGTCTGCAGACTCTCGGTaGTGGATGCTACAACTGACT +
Preference number: 4 (lower is better)
Translates to: SVLLQTHSEARFGTPLSQSADSR*WMLQLT
Trigger: AGTCAGTTGTAGCATCCATCACCGAGAGTCTGCAGA...CTGACTCAGGGGTGTACCGAATCTTGCTTCAGAATGAGTTTGGAGAAGCACGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTAACTCCATGGACACGTaGTCCTGCAGCATCTGCCGG +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWANSMDT*SCSICR
Trigger: CCGGCAGATGCTGCAGGAGCACGTGTCCATGGAGTT...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp TCCTCCTGCACATCTGGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTGCATGGTCATTGCTTaGAATGCACTTATAGTTGTC +
Preference number: 4 (lower is better)
Translates to: SSCTSGLWFQVRVTVLGTCMVIA*NALIVV
Trigger: GACAACTATAAGTGCATTGCAAGCAATGACCATGCA...AGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCCAGATGTGCAGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGTGTACTTGCCCTCGTaGTCAGGGCCCATACTGGGA +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWVYLPS*SGPILG
Trigger: TCCCAGTATGGGCCCTGAGCACGAGGGCAAGTACAC...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTTCCAGCACACTAAGGTaGAGAGTGGCCGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWASSTLR*RVAVAE
Trigger: CTCAGCCACGGCCACTCTGCACCTTAGTGTGCTGGA...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp GGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTATGGATGTCATAGCGTaGTTCTCCAAACTCATTCTG +
Preference number: 4 (lower is better)
Translates to: GLWFQVRVTVLGTSSNNRMDVIA*FSKLIL
Trigger: CAGAATGAGTTTGGAGAAGCACGCTATGACATCCAT...ACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp GGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTTGCTTTGATTTCTTCTaGAGACTCTCGGTGATGGAT +
Preference number: 4 (lower is better)
Translates to: GLWFQVRVTVLGTSSNNRCFDFF*RLSVMD
Trigger: ATCCATCACCGAGAGTCTGCAGAAGAAATCAAAGCA...ACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp GCACACGCCGCTGGTGGAGTTGTACCAGAACTTGGAGTTGGCCGTGATGTTGACATGAGTTACGTTTATTaGCCCATCCCTTCACTGAAT +
Preference number: 4 (lower is better)
Translates to: AHAAGGVVPELGVGRDVDMSYVY*PIPSLN
Trigger: ATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT...GTCAACATCACGGCCAACTCCAAGTTCTGGTACAACTCCACCAGCGGCGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTAGGTCTGCACGTGGGTaGTGGAGCTGGAGAACTCCA +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWARSARG*WSWRTP
Trigger: TGGAGTTCTCCAGCTCCACCACCCACGTGCAGACCT...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGACTTCCCCGCGCTCCATaGACACGCGTTCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRLPRAP*TRVPPP
Trigger: CGGAGGAGGAACGCGTGTCCATGGAGCGCGGGGAAG...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTTGGCCACTACTGAGCTaGATGGCACACTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWAWPLLS*MAHWAV
Trigger: GACAGCCCAGTGTGCCATCCAGCTCAGTAGTGGCCA...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGTCCTCCTGCACATCTaGGCTGTGGTTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWAVLLHI*AVVPGQ
Trigger: CTGACCTGGAACCACAGCCCAGATGTGCAGGAGGAC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAACGAAGCGCGGCGCGTaGCGCCAGTCCTTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRTKRGA*RQSFFS
Trigger: CGAGAAGAAGGACTGGCGCCACGCGCCGCGCTTCGT...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGGGTGCACACGCCGCTaGTGGAGTTGTACCAGAACT +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWAGCTRR*WSCTRT
Trigger: AGTTCTGGTACAACTCCACCAGCGGCGTGTGCACCC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCCCTGTGGAGGCTTTaGACGGTCCAGCACACTAAG +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWALWRL*TVQHTK
Trigger: CTTAGTGTGCTGGACCGTCCAAAGCCTCCACAGGGC...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513874.6
3UTR CAA 72 bp GTGCTATTAATGAGGAACTGGGAGTGGTTTTTGCTCTaGGTAATTGTCTCTCGGCCCTTGGTGGGAACGCCA +
Preference number: 4 (lower is better)
Translates to: VLLMRNWEWFLL*VIVSRPLVGTP
Trigger: TGGCGTTCCCACCAAGGGCCGAGAGACAATTACCAAGAGCAAAAACCACTCCCAGTTCCTCATTAATAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGTGAGACTTCAGCACTaGCCAGTCCCTCCCAACACT +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWAVRLQH*PVPPNT
Trigger: AGTGTTGGGAGGGACTGGTCAGTGCTGAAGTCTCAC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGATCTTGGCGGACTCCTTaGTGGGGATGCCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRSWRTP*WGCRSP
Trigger: GGGAGAGCGGCATCCCCATCAAGGAGTCCGCCAAGA...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGCCCCCGAAAGTCGGTaGAACCATACTCCATGCACA +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWAAPESR*NHTPCT
Trigger: TGTGCATGGAGTATGGTTTCACCGACTTTCGGGGGC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGACGCTCCTCCACAGTaGCGATGGCAGTACTGTAGT +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWDAPPQ*RWQYCS
Trigger: ACTACAGTACTGCCATCGTCACTGTGGAGGAGCGTC...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTTGCCTGGCAAGTCCGTaGTCTCCTTGCCATCCTTCA +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWACLASP*SPCHPS
Trigger: TGAAGGATGGCAAGGAGATCACGGACTTGCCAGGCA...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGCCCTCCGTTCCACTATaGACTGTGTCACAGGTCGTC +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWPSVPL*TVSQVV
Trigger: GACGACCTGTGACACAGTTCATAGTGGAACGGAGGG...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR GCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGTAGGGTCTCCATCCTaGATGGCCACCACAGTGTAC +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWVGSPS*MATTVY
Trigger: GTACACTGTGGTGGCCATGCAGGATGGAGACCCTAC...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGCCCTGCTTCACAATCTaGATGCCTGGCAAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWPCFTI*MPGKSV
Trigger: CACGGACTTGCCAGGCATGCAGATTGTGAAGCAGGG...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGAGGCTTCACTTTCCGTaGCCTTGGCCCGGAATGTGT +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWRLHFP*PWPGMC
Trigger: ACACATTCCGGGCCAAGGGCACGGAAAGTGAAGCCT...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGCCAGGCCAGGGAAATaGTGGAGTTGGAGGAATCAG +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWAARPGK*WSWRNQ
Trigger: CTGATTCCTCCAACTCCAGCATTTCCCTGGCCTGGC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp ATCTGGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAAGGAGCTCACATGAGGTaGTTTGATTTCTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: IWAVVPGQSHCVGDFLKQGAHMR*FDFFCR
Trigger: TCTGCAGAAGAAATCAAAGCACCTCATGTGAGCTCC...TTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGTGCACTTGGTGCCCTaGATGGGGTCCTTGTTGACT +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWVHLVP*MGSLLT
Trigger: AGTCAACAAGGACCCCATCCAGGGCACCAAGTGCAC...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCACTGGGCTTCCTACACTaGGCCATGCAGAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRALGFLH*AMQRTG
Trigger: GCCTGTCCTCTGCATGGCCCAGTGTAGGAAGCCCAG...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGAGCATCTGCCGGCTGTaGATGGTTGTCATGGTGACA +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWSICRL*MVVMVT
Trigger: TGTCACCATGACAACCATTCACAGCCGGCAGATGCT...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGTCCGGGTCACTAAGCTaGAGAACTCCACTATGCTCG +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWSGSLS*RTPLCS
Trigger: CGAGCATAGTGGAGTTCTTCAGCTTAGTGACCCGGA...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACGGCGCGGTGACCGGTTaGGGCTTCTCCACGAACTCA +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHGAVTG*GFSTNS
Trigger: TGAGTTCGTGGAGAAGCCTCAACCGGTCACCGCGCC...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAGCTCATCCAGCACTGTaGGCTCTGCACTCATCCGCT +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRAAHPAL*ALHSSA
Trigger: AGCGGATGAGTGCAGAGCTCACAGTGCTGGATGAGC...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGCCATACTGGGAAAGATaGGCTTGTGCACTGCACCCT +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWPYWER*ACALHP
Trigger: AGGGTGCAGTGCACAAGCTCATCTTTCCCAGTATGG...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGACAGAGTGGCCGTGGCTaGGCCGTGGTCATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRQSGRG*AVVILE
Trigger: CTCAAGAATGACCACGGCTCAGCCACGGCCACTCTG...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGTCACATCAGTCACTTaGGGCTGGGAGGCAAAACCA +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWVTSVT*GWEAKP
Trigger: TGGTTTTGCCTCCCAGCCTCAAGTGACTGATGTGAC...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGGATGGGGTCCTTGTTaGCTGGCACCCACAGGTTGC +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRGWGPC*LAPTGC
Trigger: GCAACCTGTGGGTGCCAGTCAACAAGGACCCCATCC...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCATGGTGGAGAAGTTGGTaGCTTTGCCGTCCACCTCGC +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRAWWRSW*LCRPPR
Trigger: GCGAGGTGGACGGCAAAGTCACCAACTTCTCCACCA...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR TCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACGCGCGAACCACCATGTaGCTCTTCAGCCGGGCACTG +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHARTTM*LFSRAL
Trigger: CAGTGCCCGGCTGAAGAGTCACATGGTGGTTCGCGC...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR GCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGCTCCCAACACTCGAATaGTGTGTCCACGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWLPTLE*CVHGFG
Trigger: TCCAAAGCCGTGGACACAGCATTCGAGTGTTGGGAG...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGTCTGGGAGAAGGTCTaGACGTGGGTGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRVWEKV*TWVVEL
Trigger: CAGCTCCACCACCCACGTGCAGACCTTCTCCCAGAC...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGCTTCACATCGTACTTaGCCAGGGAGTACTGGATCC +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWAASHRT*PGSTGS
Trigger: GGATCCAGTACTCCCTGGGCAAGTACGATGTGAAGC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTCTGTACTTAGTGCCATaGATCAGCAGCTGCCCATCC +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWALYLVP*ISSCPS
Trigger: GGATGGGCAGCTGCTGATGCATGGCACTAAGTACAG...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAGGAGACCATCCACAGTaGACTTGGTGCCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRAGDHPQ*TWCPGW
Trigger: CCATCCAGGGCACCAAGTGCACTGTGGATGGTCTCC...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGGAACGCCATCTTTCTaGCAGATCACGTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWGTPSF*QITSGG
Trigger: ACCACCTGACGTGATCTGGCAGAAAGATGGCGTTCC...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTCCAGGTGGCTGTGCTTaGATCCCGCTTCATGATGAT +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWAPGGCA*IPLHDD
Trigger: ATCATCATGAAGCGGGATGCAAGCACAGCCACCTGG...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTTCCTACACTGGGCCATaGAGAGGACAGGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWASYTGP*RGQAKK
Trigger: TTTCTTGGCCTGTCCTCTGCATGGCCCAGTGTAGGA...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACGGCTCAGCTAGTGCCTaGACTGTAGGGTGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHGSASA*TVGWPV
Trigger: GACGGGCCACCCTACAGTCCAGGCACTAGCTGAGCC...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TTCTTCTGCAGACTCTCGGTGATGGATGCTACAACTGACTTATCATCTTTGTCAAGCTGGAGAACTCCATaGACACGTGCTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FFCRLSVMDATTDLSSLSSWRTP*TRAPAA
Trigger: TGCTGCAGGAGCACGTGTCCATGGAGTTCTCCAGCT...TGACAAAGATGATAAGTCAGTTGTAGCATCCATCACCGAGAGTCTGCAGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTTTGCCCAGGGAGTACTaGATCCTCAGTGGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWALPREY*ILSGSV
Trigger: TACTGAGCCACTGAGGATCCAGTACTCCCTGGGCAA...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGTCCCAGGAACTTCAGTaGCTCATCCAGCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWSQELQ*LIQHCE
Trigger: CTCACAGTGCTGGATGAGCCACTGAAGTTCCTGGGA...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTCGGTCAACAGTGAGCTaGGCCTTTTGTACCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWARSTVS*AFCTRF
Trigger: GAACCTGGTACAAAAGGCCCAGCTCACTGTTGACCG...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAATGGTGAGCAGTGCCTaGTCTTCCCCGCGCTCCATG +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRMVSSA*SSPRSM
Trigger: CATGGAGCGCGGGGAAGACCAGGCACTGCTCACCAT...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACAGCTGGATGGCACACTaGGCTGTCCAGGGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHSWMAH*AVQGLP
Trigger: AGGCAGGCCCTGGACAGCCCAGTGTGCCATCCAGCT...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp GCTGGAGCTCACATGAGGTGCTTTGATTTCTTCTGCAGACTCTCGGTGATGGATGGATCTTTGTGCACTTaGACCACTCCTTTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: AGAHMRCFDFFCRLSVMDGSLCT*TTPLCL
Trigger: AAGACACAAAGGAGTGGTCCAAGTGCACAAAGATCC...ATCCATCACCGAGAGTCTGCAGAAGAAATCAAAGCACCTCATGTGAGCTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTTGCACATCTGGGCTGTaGTTCCAGGTCAGAGTCACT +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWACTSGL*FQVRVT
Trigger: AGTGACTCTGACCTGGAACCACAGCCCAGATGTGCA...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGACTGCCGTGTACCAGGTaGCTGTGCTTGCATCCCGCT +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRLPCTR*LCLHPA
Trigger: AGCGGGATGCAAGCACAGCCACCTGGTACACGGCAG...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACGCGGAGCACCGTGTGTaGCTTGAGGGGCGTCACGAA +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHAEHRV*LEGRHE
Trigger: TTCGTGACGCCCCTCAAGCCACACACGGTGCTCCGC...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAGTGAGACTTCAGCACTaGCCAGTCCCTCCCAACACT +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRAVRLQH*PVPPNT
Trigger: AGTGTTGGGAGGGACTGGTCAGTGCTGAAGTCTCAC...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGAATGGTTGTCATGGTaGCAGCAGGCGTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQREWLSW*QQAWAL
Trigger: GAGTGCCCACGCCTGCTGTCACCATGACAACCATTC...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAGCTGTGCATCCTCAATaGTCAGCTCTGCTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRAAVHPQ*SALLAC
Trigger: GCAAGCGAGCAGAGCTGATCATTGAGGATGCACAGC...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGTGCCTCCAGTACTaGCGGGTCGATGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHQCLQY*RVDGRR
Trigger: CCTCCTACCATCGACCCGTCAGTACTGGAGGCACTG...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAATCCTTGGCCACTACTaGGCTGGATGGCACACTGGG +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRILGHY*AGWHTG
Trigger: CCCAGTGTGCCATCCAGCTCAGTAGTGGCCAAGGAT...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp TTCTTCTGCAGACTCTCGGTGATGGATGCTACAACTGACTTATCATCTTTGTCATGTGTAGCAGGTGCCTaGGATGGGGATCTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: FFCRLSVMDATTDLSSLSCVAGA*DGDLCA
Trigger: TGCACAAAGATCCCCATCTCAGGCACCTGCTACACA...TGACAAAGATGATAAGTCAGTTGTAGCATCCATCACCGAGAGTCTGCAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTTCTGCAGACTCTCGGTaGTGGATGCTACAACTGACT +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWASADSR*WMLQLT
Trigger: AGTCAGTTGTAGCATCCATCACCGAGAGTCTGCAGA...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGTCACTCACACCTTCTaGATTGACTGCCAGGATACG +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWVTHTF*IDCQDT
Trigger: CGTATCCTGGCAGTCAATTCAGAAGGTGTGAGTGAC...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR TCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGATCTTCAGCCGGGCACTaGGGTCAAACTTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRSSAGH*GQTWVQ
Trigger: CTGCACCCAAGTTTGACCTCAGTGCCCGGCTGAAGA...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR GCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACGTCTGGGAGAAGGTCTaGACGTGGGTGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHVWEKV*TWVVEL
Trigger: CAGCTCCACCACCCACGTGCAGACCTTCTCCCAGAC...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGTACTTGGTGCCCATCTaGTTCACATCGTACTTGCCC +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWYLVPI*FTSYLP
Trigger: GGGCAAGTACGATGTGAAGCAGATGGGCACCAAGTA...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTCCAGCATGTACTTGGTaGCCATCTGCTTCACATCGT +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWAPACTW*PSASHR
Trigger: ACGATGTGAAGCAGATGGGCACCAAGTACATGCTGG...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCACTCACACTCCAGGCATaGGCGACTCCTCTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRALTLQA*ATPLFH
Trigger: GTGAAAGAGAGGAGTCGCGCATGCCTGGAGTGTGAG...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGATGAGCTTGTGCACTaGACCCTGCTTCACAATCTG +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWDELVH*TLLHNL
Trigger: CAGATTGTGAAGCAGGGTGCAGTGCACAAGCTCATC...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCCCGGAATGTGTACTTaGCCTCGTGCTCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHPGMCT*PRAQGP
Trigger: TGGGCCCTGAGCACGAGGGCAAGTACACATTCCGGG...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAGGCTTCACTTTCCGTaGCCTTGGCCCGGAATGTGT +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRARLHFP*PWPGMC
Trigger: ACACATTCCGGGCCAAGGGCACGGAAAGTGAAGCCT...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGCCTCCGTCACTTCCATaGCATCCTTGTACCATGTCA +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWPPSLP*HPCTMS
Trigger: TGACATGGTACAAGGATGGCATGGAAGTGACGGAGG...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGATCCAGCACACTAAGGTaGAGAGTGGCCGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRSSTLR*RVAVAE
Trigger: CTCAGCCACGGCCACTCTGCACCTTAGTGTGCTGGA...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTCGGAAGAAGTATTTCTaGCTCTCGATGAGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWARKKYF*LSMSPP
Trigger: GGGAGGACTCATCGAGAGGCAGAAATACTTCTTCCG...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACGAAGACACGCTCGGCTaGCGTGTACCAGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHEDTLG*RVPGGC
Trigger: ACAGCCACCTGGTACACGGCAGCCGAGCGTGTCTTC...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGCCTTCCACTTCATGTaGACACAACTACCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWAAFHFM*TQLPES
Trigger: GCTCTCAGGTAGTTGTGTGCACATGAAGTGGAAGGC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR GCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACAGAAGGCTGCATGGATaGAGAGGGCTGTCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHRRLHG*RGLSQR
Trigger: GCGCTGGGACAGCCCTCTGCATCCATGCAGCCTTCT...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR CCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCATCTTCTGCTTCTTCTTaGGAGCAGGGGGTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRASSASS*EQGVPS
Trigger: AGAGGGCACCCCCTGCTCCCAAGAAGAAGCAGAAGA...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp CAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTAGGTTTGTGGGGTCTCAAAGTCTTTCTTaGGCACTTTGGACAAAATCT +
Preference number: 4 (lower is better)
Translates to: QVRVTVLGTSSNNRRFVGSQSLS*ALWTKS
Trigger: AGATTTTGTCCAAAGTGCCCAAGAAAGACTTTGAGA...CCCCACAAACCTACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTTCAGAATCCGGATaGCCTCCACCTCTACTTTCT +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWASESG*PPPLLS
Trigger: AGAAAGTAGAGGTGGAGGCCATCCGGATTCTGAAGC...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGCTTCAGAATCCGGATaGCCTCCACCTCTACTTTCT +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWAASESG*PPPLLS
Trigger: AGAAAGTAGAGGTGGAGGCCATCCGGATTCTGAAGC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGTCAAACACAGCTGTCTaGCGCTCTGTCACCTTCACA +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWSNTAV*RSVTFT
Trigger: TGTGAAGGTGACAGAGCGCCAGACAGCTGTGTTTGA...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGCAGTGTCACATCCTTaGATGTCAGCTCACACTCCA +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWAAVSHP*MSAHTP
Trigger: TGGAGTGTGAGCTGACATCCAAGGATGTGACACTGC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTCGCTTGCCCTCATaGTTCATGCTGTACTTAGTG +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWARLPS*FMLYLV
Trigger: CACTAAGTACAGCATGAACCATGAGGGCAAGCGAGC...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGGTCTCCATCCTGCATaGCCACCACAGTGTACTCGC +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRGLHPA*PPQCTR
Trigger: GCGAGTACACTGTGGTGGCCATGCAGGATGGAGACC...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGCACAATCTGCATGCCTaGCAAGTCCGTGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWHNLHA*QVRDLL
Trigger: AAGGAGATCACGGACTTGCCAGGCATGCAGATTGTG...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAAAGGGGACCTTGATGTaGGCCGTGTGGCCTACCTTC +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRKGTLM*AVWPTF
Trigger: GAAGGTAGGCCACACGGCCCACATCAAGGTCCCCTT...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGTGTACCATGTCACTTTaGGCAGTGGTTTTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWCTMSL*AVVFPG
Trigger: TCCGGGGAAAACCACTGCCCAAAGTGACATGGTACA...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACGGTGCAGAGTGGCCGTaGCTGAGCCGTGGTCATTCT +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHGAEWP*LSRGHS
Trigger: AGAATGACCACGGCTCAGCCACGGCCACTCTGCACC...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGATGGCCACTACTGAGCTaGATGGCACACTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRWPLLS*MAHWAV
Trigger: GACAGCCCAGTGTGCCATCCAGCTCAGTAGTGGCCA...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACGATGTAGCCAGAGGGTaGGTCTCCCTCTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHDVARG*VSLCRL
Trigger: GAGCCTGCAGAGGGAGACCCACCCTCTGGCTACATC...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGATCTCTCGGCCCTTGGTaGGAACGCCATCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRSLGPW*ERHLSA
Trigger: GGCAGAAAGATGGCGTTCCCACCAAGGGCCGAGAGA...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGCCTCCTGATGCCTaGGCTTGGCTGGAGCTCACA +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHQPPDA*AWLELT
Trigger: TGTGAGCTCCAGCCAAGCCCAGGCATCAGGAGGCTG...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCTGGGCTTCCTACACTaGGCCATGCAGAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHLGFLH*AMQRTG
Trigger: GCCTGTCCTCTGCATGGCCCAGTGTAGGAAGCCCAG...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGTCAGCTCCTTCCCATTaGACTTCCACACAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWSAPSH*TSTQSW
Trigger: CCAACTTTGTGTGGAAGTTCAATGGGAAGGAGCTGA...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGGATGCGGTCAACAGTaGGCTGGGCCTTTTGTACCA +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRGCGQQ*AGPFVP
Trigger: TGGTACAAAAGGCCCAGCTCACTGTTGACCGCATCC...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCTTTGTCATAGACGGTaGGCGTGCAGCTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHLCHRR*ACSCCG
Trigger: ACCGCAGCAGCTGCACGCTCACCGTCTATGACAAAG...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGTGCACACAACTACCTaGGAGCTCCAGGAACTCCAC +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRVHTTT*ELQELH
Trigger: GTGGAGTTCCTGGAGCTCTCAGGTAGTTGTGTGCAC...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR GCA 90 bp GTGGTTTTTGCTCTTGGTAATTGTCTCTCGGCCCTTGGTGGGAACGCCATCTTTCATCTGCATGGTCATTaGTTGCAATGCACTTATAGT +
Preference number: 4 (lower is better)
Translates to: VVFALGNCLSALGGNAIFHLHGH*LQCTYS
Trigger: ACTATAAGTGCATTGCAAGCAATGACCATGCAGATG...AAAGATGGCGTTCCCACCAAGGGCCGAGAGACAATTACCAAGAGCAAAAACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGACAGCACTGTGAGCTCTaGACTCATCCGCTTATCGCC +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRQHCEL*THPLIA
Trigger: GGCGATAAGCGGATGAGTGCAGAGCTCACAGTGCTG...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCCATGCATCAGCAGCTaGCCATCCTTCTTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHPCISS*PSFFQR
Trigger: GCGCTGGAAGAAGGATGGGCAGCTGCTGATGCATGG...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGACCATCACTGAGCTGTaGATCCTCAATGATCAGCTC +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWTITEL*ILNDQL
Trigger: GAGCTGATCATTGAGGATGCACAGCTCAGTGATGGT...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGACCCTGCTTCACAATCTaGATGCCTGGCAAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRPCFTI*MPGKSV
Trigger: CACGGACTTGCCAGGCATGCAGATTGTGAAGCAGGG...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACTTCACAGTGATGGCGTaGGCAGCCAGTGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHFTVMA*AASASS
Trigger: ACTGGAGGCACTGGCTGCGCACGCCATCACTGTGAA...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCACTGGCACCCACAGGTTaGTGCCTTTCTTCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRALAPTG*CLSSFV
Trigger: AACGAAGGAAGAAAGGCAGCAACCTGTGGGTGCCAG...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCACCAGGTGGCTGTGCTTaGATCCCGCTTCATGATGAT +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRAPGGCA*IPLHDD
Trigger: ATCATCATGAAGCGGGATGCAAGCACAGCCACCTGG...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACGCCTGGACTGTAGGGTaGCCCGTCTCCTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHAWTVG*PVSFFL
Trigger: AAGGAAGAAGGAGACGGGCCACCCTACAGTCCAGGC...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACTCTGCACGTGGGTGGTaGAGCTGGAGAACTCCATGG +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHSARGW*SWRTPW
Trigger: CCATGGAGTTCTCCAGCTCCACCACCCACGTGCAGA...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACAGGTCTGCACGTGGGTaGTGGAGCTGGAGAACTCCA +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHRSARG*WSWRTP
Trigger: TGGAGTTCTCCAGCTCCACCACCCACGTGCAGACCT...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAACGATCTTGGTTGTCTaGGAGAAGGTCTGCACGTGG +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRATILVV*EKVCTW
Trigger: CCACGTGCAGACCTTCTCCCAGACAACCAAGATCGT...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGAGTTGGGCTCTTTCTTaGAGAGGCGGATCTCAAACA +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWSWALS*RGGSQT
Trigger: TGTTTGAGATCCGCCTCTCCAAGAAAGAGCCCAACT...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCATCCACAGTGCACTTaGTGCCCTGGATGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHHPQCT*CPGWGP
Trigger: AGGACCCCATCCAGGGCACCAAGTGCACTGTGGATG...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGTCAGAGTCACTGTGTTaGGGACTTCCTCAAACAACC +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWSESLC*GLPQTT
Trigger: GGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGA...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAGTCCCTGGAGTCAAGTaGCTCACTGTCACCGATTTC +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRAVPGVK*LTVTDF
Trigger: GAAATCGGTGACAGTGAGCCACTTGACTCCAGGGAC...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACAAACTTGGGTGCAGCTaGTGGTGGCATGGCACGGAC +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHKLGCS*WWHGTD
Trigger: GTCCGTGCCATGCCACCACCAGCTGCACCCAAGTTT...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR TCA 90 bp TTCTTCTGCAGACTCTCGGTGATGGATGCTACAACTGACTTATCATCTTTGTCATCAGCTCCTTCCCATTaGACTTCCACACAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: FFCRLSVMDATTDLSSLSSAPSH*TSTQSW
Trigger: CCAACTTTGTGTGGAAGTTCAATGGGAAGGAGCTGA...TGACAAAGATGATAAGTCAGTTGTAGCATCCATCACCGAGAGTCTGCAGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR TCA 90 bp TGCCACGCGCACATGGATGTCATAGCGTGCTTCTCCAAACTCATTCTGAAGCAAGATGGATGCTACAACTaGCTTATCATCTTTGTCATA +
Preference number: 4 (lower is better)
Translates to: CHAHMDVIACFSKLILKQDGCYN*LIIFVI
Trigger: TATGACAAAGATGATAAGTCAGTTGTAGCATCCATC...TTGCTTCAGAATGAGTTTGGAGAAGCACGCTATGACATCCATGTGCGCGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR GCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCACCTCCGTCACTTCCATaGCATCCTTGTACCATGTCA +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRAPPSLP*HPCTMS
Trigger: TGACATGGTACAAGGATGGCATGGAAGTGACGGAGG...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGAGGAATCAGATACATaGAGGTCCTGGACCAGGCCT +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQREESDT*RSWTRP
Trigger: AGGCCTGGTCCAGGACCTGCATGTATCTGATTCCTC...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGACCACTGTGTAGCAGGTaGCTGAGATGGGGATCTTTG +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRPLCSR*LRWGSL
Trigger: CAAAGATCCCCATCTCAGGCACCTGCTACACAGTGG...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGACCTCTCCCACGATCTTaGTTGTCTGGGAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRPLPRS*LSGRRS
Trigger: AGACCTTCTCCCAGACAACCAAGATCGTGGGAGAGG...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACGTCATCCGAAGTCAGTaGCTCCAGCTTCAGCACGTG +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHVIRSQ*LQLQHV
Trigger: CACGTGCTGAAGCTGGAGCCACTGACTTCGGATGAC...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCACTGTGGTGTCAACCTTaGTCTCTTTGTCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRALWCQP*SLCLPG
Trigger: CCCTGGAAGACAAAGAGACCAAGGTTGACACCACAG...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGAGTCAAAGACCACTGTaGTGTCAACCTTGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWSQRPL*CQPWSL
Trigger: AAGAGACCAAGGTTGACACCACAGTGGTCTTTGACT...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACGTCCTGGACCAGGCCTaGGGGTTTAACAGGATCCTT +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHVLDQA*GFNRIL
Trigger: AAGGATCCTGTTAAACCCCCAGGCCTGGTCCAGGAC...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACACAACCGTAGGTTTGTaGGGGGCCGAGGGAAATCTG +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHTTVGL*GAEGNL
Trigger: CAGATTTCCCTCGGCCCCCCACAAACCTACGGTTGT...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACATGCCTGGGCTTGGCTaGAGCTCACATGAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHMPGLG*SSHEVL
Trigger: AAGCACCTCATGTGAGCTCCAGCCAAGCCCAGGCAT...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGAACCAGGAGGCTCTATaGGATTTCCTGCAAACACTT +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWNQEAL*DFLQTL
Trigger: AAGTGTTTGCAGGAAATCCCATAGAGCCTCCTGGTT...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR TCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCACATCTTCGGACACCGTaGTTTCATACTTGTCATCCC +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRAHLRTP*FHTCHP
Trigger: GGGATGACAAGTATGAAATCACGGTGTCCGAAGATG...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACGTCACATCAGTCACTTaGGGCTGGGAGGCAAAACCA +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHVTSVT*GWEAKP
Trigger: TGGTTTTGCCTCCCAGCCTCAAGTGACTGATGTGAC...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACATTTCTGCCTCTCGATaGGTCCTCCCACTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHISASR*VLPLCS
Trigger: GCTACACAGTGGGAGGACTCATCGAGAGGCAGAAAT...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGCCCCATCCCTTCACTaGATGTTTACATTAACAAAC +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWAAPSLH*MFTLTN
Trigger: GTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACTCAGCTCTGCTCGCTTaGCCTCATGGTTCATGCTGT +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHSALLA*PHGSCC
Trigger: ACAGCATGAACCATGAGGGCAAGCGAGCAGAGCTGA...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGACTCAATGATCAGCTCTaGTCGCTTGCCCTCATGGTT +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRLNDQL*SLALMV
Trigger: AACCATGAGGGCAAGCGAGCAGAGCTGATCATTGAG...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCACCCACAGGTTGCTaGCTTTCTTCCTTCGTTCTA +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRAPTGC*LSSFVL
Trigger: TAGAACGAAGGAAGAAAGGCAGCAACCTGTGGGTGC...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGACGGAAGAAGTATTTCTaGCTCTCGATGAGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRRKKYF*LSMSPP
Trigger: GGGAGGACTCATCGAGAGGCAGAAATACTTCTTCCG...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACACGATCTTGGTTGTCTaGGAGAAGGTCTGCACGTGG +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHTILVV*EKVCTW
Trigger: CCACGTGCAGACCTTCTCCCAGACAACCAAGATCGT...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TTCTTCTGCAGACTCTCGGTGATGGATGCTACAACTGACTTATCATCTTTGTCAGAGATACGGTATAGATaGCATCTGCATGGTCATTGC +
Preference number: 4 (lower is better)
Translates to: FFCRLSVMDATTDLSSLSEIRYR*HLHGHC
Trigger: GCAATGACCATGCAGATGCCATCTATACCGTATCTC...TGACAAAGATGATAAGTCAGTTGTAGCATCCATCACCGAGAGTCTGCAGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACTGCACATCTGGGCTGTaGTTCCAGGTCAGAGTCACT +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHCTSGL*FQVRVT
Trigger: AGTGACTCTGACCTGGAACCACAGCCCAGATGTGCA...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGCATCTGCATGGTCATTaGTTGCAATGCACTTATAGT +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWHLHGH*LQCTYS
Trigger: ACTATAAGTGCATTGCAAGCAATGACCATGCAGATG...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACTTTGCCACCTTCTTCTaGTTCTTCTTGGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHFATFF*FFLGAG
Trigger: CCCTGCTCCCAAGAAGAAGCAGAAGAAGGTGGCAAA...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCATTAATCTTAAGCGTGTaGGTCAGACCATCTTCGGAC +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRALILSV*VRPSSD
Trigger: GTCCGAAGATGGTCTGACGCACACGCTTAAGATTAA...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACGCACCCACAGGTTGCTaGCTTTCTTCCTTCGTTCTA +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHAPTGC*LSSFVL
Trigger: TAGAACGAAGGAAGAAAGGCAGCAACCTGTGGGTGC...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTATGAGTTACGTTTATTaGCCCATCCCTTCACTGAAT +
Preference number: 4 (lower is better)
Translates to: PIPSLNVYINKHQRANWAMSYVY*PIPSLN
Trigger: ATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACGGACTTCTTGCCAACTaGCCTCCGTTCCACTATGAA +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHGLLAN*PPFHYE
Trigger: TTCATAGTGGAACGGAGGGCAGTTGGCAAGAAGTCC...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR CCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACGTACTGGATCCTCAGTaGCTCAGTACCCTTGATCCA +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHVLDPQ*LSTLDP
Trigger: TGGATCAAGGGTACTGAGCCACTGAGGATCCAGTAC...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAGGTATAGATGGCATCTaGATGGTCATTGCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRAGIDGI*MVIACN
Trigger: ATTGCAAGCAATGACCATGCAGATGCCATCTATACC...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCACTTTCTTGGGCACTTTaGACAAAATCTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRALSWAL*TKSPAS
Trigger: AGATGCTGGAGATTTTGTCCAAAGTGCCCAAGAAAG...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGTCTCAAAGTCTTTCTTaGGCACTTTGGACAAAATCT +
Preference number: 4 (lower is better)
Translates to: CPIPSLNVYINKHQRANWSQSLS*ALWTKS
Trigger: AGATTTTGTCCAAAGTGCCCAAGAAAGACTTTGAGA...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACAGTTGGGCTCTTTCTTaGAGAGGCGGATCTCAAACA +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHSWALS*RGGSQT
Trigger: TGTTTGAGATCCGCCTCTCCAAGAAAGAGCCCAACT...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGGGAAATGCTGGAGTTaGAGGAATCAGATACATGCA +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRGKCWS*RNQIHA
Trigger: TGCATGTATCTGATTCCTCCAACTCCAGCATTTCCC...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAAAGTCCATTTTCTCTTaGCCTTCTGTTACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRKSIFS*PSVTSR
Trigger: TCTGCTGGTAACAGAAGGTCAAGAGAAAATGGACTT...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACTCTCCAAACTCATTCTaGAGCAAGATTCGGTACACC +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHSPNSF*SKIRYT
Trigger: GGTGTACCGAATCTTGCTTCAGAATGAGTTTGGAGA...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAGGTCATTGCTTGCAATaGACTTATAGTTGTCAGAGT +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRAGHCLQ*TYSCQS
Trigger: ACTCTGACAACTATAAGTGCATTGCAAGCAATGACC...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAATGGATGTCATAGCGTaGTTCTCCAAACTCATTCTG +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRMDVIA*FSKLIL
Trigger: CAGAATGAGTTTGGAGAAGCACGCTATGACATCCAT...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACAAGTCCATTTTCTCTTaGCCTTCTGTTACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHKSIFS*PSVTSR
Trigger: TCTGCTGGTAACAGAAGGTCAAGAGAAAATGGACTT...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR TCA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAGATGGATGCTACAACTaGCTTATCATCTTTGTCATA +
Preference number: 4 (lower is better)
Translates to: VYCPIPSLNVYINKHQRADGCYN*LIIFVI
Trigger: TATGACAAAGATGATAAGTCAGTTGTAGCATCCATC...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGATGCATGGTCATTGCTTaGAATGCACTTATAGTTGTC +
Preference number: 4 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRCMVIA*NALIVV
Trigger: GACAACTATAAGTGCATTGCAAGCAATGACCATGCA...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR GCA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACTGCTTTGATTTCTTCTaGAGACTCTCGGTGATGGAT +
Preference number: 4 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHCFDFF*RLSVMD
Trigger: ATCCATCACCGAGAGTCTGCAGAAGAAATCAAAGCA...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp GCGGAGCACCGTGTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCACGCCCGCAGGGATGTTaGAGCTCCGGGTCACTAAGC +
Preference number: 5 (lower is better)
Translates to: AEHRVWLEGRHEARRVAPRPQGC*SSGSLS
Trigger: GCTTAGTGACCCGGAGCTCAAACATCCCTGCGGGCG...TGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACACACGGTGCTCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS TCA 90 bp CTGGAGCCCGGTGAGCCACAGGCAGCAACACACCCTCGGGCGCGGTaGCCGGTTGAGGCTTCTCCACGAACTCAGGGACGCTGTCGCCCG +
Preference number: 5 (lower is better)
Translates to: LEPGEPQAATHPRAR*PVEASPRTQGRCRP
Trigger: CGGGCGACAGCGTCCCTGAGTTCGTGGAGAAGCCTCAACCGGTCACCGCGCCCGAGGGTGTGTTGCTGCCTGTGGCTCACCGGGCTCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412229.2
CDS-3UTR CAA 90 bp ACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGCTCGTTCTCCACCAGCACGGCCCGGAATGTGTACTaGCCCTCGTGCTCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: TVSVQLLRSLPSSFSTSTARNVY*PSCSGP
Trigger: GGGCCCTGAGCACGAGGGCAAGTACACATTCCGGGC...CGTGCTGGTGGAGAACGAGCTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp GTGTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCCCATCCACAGTGCACTaGGTGCCCTGGATGGGGTCC +
Preference number: 5 (lower is better)
Translates to: VCGLRGVTKRGAWRQSFFPSTVH*VPWMGS
Trigger: GGACCCCATCCAGGGCACCAAGTGCACTGTGGATGG...GAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS CCA 90 bp GCGGACTCCTTGATGGGGATGCCGCTCTCCCTCTTCCAGGAGATGTaGGGTTTGGCGTTCCCCTGCACCCGGGCTCGGAACACGGCTTTG +
Preference number: 5 (lower is better)
Translates to: ADSLMGMPLSLFQEM*GLAFPCTRARNTAL
Trigger: CAAAGCCGTGTTCCGAGCCCGGGTGCAGGGGAACGCCAAACCCCACATCTCCTGGAAGAGGGAGAGCGGCATCCCCATCAAGGAGTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS-3UTR CAA 90 bp GCTGAAGACACGCTCGGCTGCCGTGTACCAGGTGGCTGTGCTTGCATCCCGCTTCAGCTGCTGCGGTCCTaGCCCAGCTCGTTCTCCACC +
Preference number: 5 (lower is better)
Translates to: AEDTLGCRVPGGCACIPLQLLRS*PSSFST
Trigger: GGTGGAGAACGAGCTGGGCAAGGACCGCAGCAGCTG...AAGCGGGATGCAAGCACAGCCACCTGGTACACGGCAGCCGAGCGTGTCTTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp GTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCTCTCCTCTCCCACGATCTaGGTTGTCTGGGAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: VWLEGRHEARRVAPVLLLSSPTI*VVWEKV
Trigger: GACCTTCTCCCAGACAACCAAGATCGTGGGAGAGGA...GAGAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp CCGCGGGTTCCCAAGGAAGGCGCAGGTCATGGTGCAGTCCTGGCCGCGGAGCACTTGTACCATGTCACTTaGGGCAGTGGTTTTCCCCGG +
Preference number: 5 (lower is better)
Translates to: PRVPKEGAGHGAVLAAEHLYHVT*GSGFPR
Trigger: CCGGGGAAAACCACTGCCCAAAGTGACATGGTACAA...GTGCTCCGCGGCCAGGACTGCACCATGACCTGCGCCTTCCTTGGGAACCCGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp ACACGCTCGGCTGCCGTGTACCAGGTGGCTGTGCTTGCATCCCGCTTCATGATGAGCACCGTGTGTGGCTaGAGGGGCGTCACGAAGCGC +
Preference number: 5 (lower is better)
Translates to: TRSAAVYQVAVLASRFMMSTVCG*RGVTKR
Trigger: GCGCTTCGTGACGCCCCTCAAGCCACACACGGTGCT...CATCATGAAGCGGGATGCAAGCACAGCCACCTGGTACACGGCAGCCGAGCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS GCA 90 bp TCATTCAGCACTACACACAACTCAGCTGGGCTCCCAGTGGCCGCGTaGACGTCGGACATCCCGCTCTTCACTGTGGCCAGACGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SFSTTHNSAGLPVAA*TSDIPLFTVARRSS
Trigger: GGAGGAGCGTCTGGCCACAGTGAAGAGCGGGATGTCCGACGTGCACGCGGCCACTGGGAGCCCAGCTGAGTTGTGTGTAGTGCTGAATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 90 bp GGGACCTTGATGTGGGCCGTGTGGCCTACCTTCACAGTGATGGCGTaGGCAGCCAGTGCCTCCAGTACTGACGGGTCGATGGTAGGAGGA +
Preference number: 5 (lower is better)
Translates to: GTLMWAVWPTFTVMA*AASASSTDGSMVGG
Trigger: TCCTCCTACCATCGACCCGTCAGTACTGGAGGCACTGGCTGCGCACGCCATCACTGTGAAGGTAGGCCACACGGCCCACATCAAGGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 90 bp GATGAGGCCGCTGTCTTCACGCACACAGTTGGAGATGGTGAGCAGTaGCTGGTCTTCCCCGCGCTCCATGGACACGCGTTCCTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: DEAAVFTHTVGDGEQ*LVFPALHGHAFLLR
Trigger: ACGGAGGAGGAACGCGTGTCCATGGAGCGCGGGGAAGACCAGGCACTGCTCACCATCTCCAACTGTGTGCGTGAAGACAGCGGCCTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CCA 90 bp AGGCCGCTGTCTTCACGCACACAGTTGGAGATGGTGAGCAGTGCCTaGTCTTCCCCGCGCTCCATGGACACGCGTTCCTCCTCCGTCACT +
Preference number: 5 (lower is better)
Translates to: RPLSSRTQLEMVSSA*SSPRSMDTRSSSVT
Trigger: AGTGACGGAGGAGGAACGCGTGTCCATGGAGCGCGGGGAAGACCAGGCACTGCTCACCATCTCCAACTGTGTGCGTGAAGACAGCGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS-3UTR CAA 90 bp CATGATGATGTAGTGAGCCTCACCGTCCTCCTGCACATCTGGGCTGTGGTTCCAGCTCGGAACACGGCTTaGTCCCCCTCGGGCGCGGTG +
Preference number: 5 (lower is better)
Translates to: HDDVVSLTVLLHIWAVVPARNTA*SPSGAV
Trigger: CACCGCGCCCGAGGGGGACAAAGCCGTGTTCCGAGC...TGGAACCACAGCCCAGATGTGCAGGAGGACGGTGAGGCTCACTACATCATCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGGCTCGGAACACGGCTTaGTCCCCCTCGGGCGCGGTG +
Preference number: 5 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWARNTA*SPSGAV
Trigger: CACCGCGCCCGAGGGGGACAAAGCCGTGTTCCGAGC...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp CCGCGGGTTCCCAAGGAAGGCGCAGGTCATGGTGCAGTCCTGGCCGCGGAGCACACTGTGGTGTCAACCTaGGTCTCTTTGTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: PRVPKEGAGHGAVLAAEHTVVST*VSLSSR
Trigger: CCTGGAAGACAAAGAGACCAAGGTTGACACCACAGT...GTGCTCCGCGGCCAGGACTGCACCATGACCTGCGCCTTCCTTGGGAACCCGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp ATCATCTTTGTCATAGACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGCTCCCCCGGAAGGGGACCTaGATGTGGGCCGTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: IIFVIDGERAAAAVLAQLPRKGT*MWAVWP
Trigger: AGGCCACACGGCCCACATCAAGGTCCCCTTCCGGGG...GAGCTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGTCTATGACAAAGATGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS CCA 90 bp CCTTCTCGTCATTCAGCACTACACACAACTCAGCTGGGCTCCCAGTaGCCGCGTGCACGTCGGACATCCCGCTCTTCACTGTGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: PSRHSALHTTQLGSQ*PRARRTSRSSLWPD
Trigger: GTCTGGCCACAGTGAAGAGCGGGATGTCCGACGTGCACGCGGCCACTGGGAGCCCAGCTGAGTTGTGTGTAGTGCTGAATGACGAGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CCA 90 bp GGAGGCTCCAGCACACTAAGGTGCAGAGTGGCCGTGGCTGAGCCGTaGTCATTCTTGAGCTTGAGCAGGATGAGGCCGCTGTCTTCACGC +
Preference number: 5 (lower is better)
Translates to: GGSSTLRCRVAVAEP*SFLSLSRMRPLSSR
Trigger: GCGTGAAGACAGCGGCCTCATCCTGCTCAAGCTCAAGAATGACCACGGCTCAGCCACGGCCACTCTGCACCTTAGTGTGCTGGAGCCTCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS CCA 90 bp GGACGGTCCAGCACACTAAGGTGCAGAGTGGCCGTGGCTGAGCCGTaGTCATTCTTGAGCTTGAGCAGGATGAGGCCGCTGTCTTCACGC +
Preference number: 5 (lower is better)
Translates to: GRSSTLRCRVAVAEP*SFLSLSRMRPLSSR
Trigger: GCGTGAAGACAGCGGCCTCATCCTGCTCAAGCTCAAGAATGACCACGGCTCAGCCACGGCCACTCTGCACCTTAGTGTGCTGGACCGTCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS-3UTR CAA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGCCCCGGAAGGGGACCTaGATGTGGGCCGTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWPRKGT*MWAVWP
Trigger: AGGCCACACGGCCCACATCAAGGTCCCCTTCCGGGG...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp CTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCTCGTAGGGACTTGGACCACTCCTTaGTGTCTTCAGCCCTCATCT +
Preference number: 5 (lower is better)
Translates to: LEGRHEARRVAPVLLLVGTWTTP*CLQPSS
Trigger: AGATGAGGGCTGAAGACACAAAGGAGTGGTCCAAGT...CCCTACGAGAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS TCA 90 bp AGGCTTTGGACGGTCCAGCACACTAAGGTGCAGAGTGGCCGTGGCTaGGCCGTGGTCATTCTTGAGCTTGAGCAGGATGAGGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: RLWTVQHTKVQSGRG*AVVILELEQDEAAV
Trigger: GACAGCGGCCTCATCCTGCTCAAGCTCAAGAATGACCACGGCTCAGCCACGGCCACTCTGCACCTTAGTGTGCTGGACCGTCCAAAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS TCA 90 bp AAGGCTGCATGGATGCAGAGGGCTGTCCCAGCGCGAACCACCATGTaGCTCTTCAGCCGGGCACTGAGGTCAAACTTGGGTGCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: KAAWMQRAVPARTTM*LFSRALRSNLGAAG
Trigger: ACCAGCTGCACCCAAGTTTGACCTCAGTGCCCGGCTGAAGAGTCACATGGTGGTTCGCGCTGGGACAGCCCTCTGCATCCATGCAGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS GCA 90 bp CTCACGACCTCCTCTCCCACGATCTTGGTTGTCTGGGAGAAGGTCTaGACGTGGGTGGTGGAGCTGGAGAACTCCATGGACACGTGCTCC +
Preference number: 5 (lower is better)
Translates to: LTTSSPTILVVWEKV*TWVVELENSMDTCS
Trigger: GGAGCACGTGTCCATGGAGTTCTCCAGCTCCACCACCCACGTGCAGACCTTCTCCCAGACAACCAAGATCGTGGGAGAGGAGGTCGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319338.6
ENST00000412229.2
ENST00000504981.5
ENST00000513874.6
CDS CCA 90 bp CGATCTTGGTTGTCTGGGAGAAGGTCTGCACGTGGGTGGTGGAGCTaGAGAACTCCATGGACACGTGCTCCTGCAGCATCTGCCGGCTGT +
Preference number: 5 (lower is better)
Translates to: RSWLSGRRSARGWWS*RTPWTRAPAASAGC
Trigger: ACAGCCGGCAGATGCTGCAGGAGCACGTGTCCATGGAGTTCTCCAGCTCCACCACCCACGTGCAGACCTTCTCCCAGACAACCAAGATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319338.6
ENST00000412229.2
ENST00000504981.5
ENST00000513874.6
CDS CCA 90 bp CTCCCACGATCTTGGTTGTCTGGGAGAAGGTCTGCACGTGGGTGGTaGAGCTGGAGAACTCCATGGACACGTGCTCCTGCAGCATCTGCC +
Preference number: 5 (lower is better)
Translates to: LPRSWLSGRRSARGW*SWRTPWTRAPAASA
Trigger: GGCAGATGCTGCAGGAGCACGTGTCCATGGAGTTCTCCAGCTCCACCACCCACGTGCAGACCTTCTCCCAGACAACCAAGATCGTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319338.6
ENST00000412229.2
ENST00000504981.5
ENST00000513874.6
CDS TCA 90 bp GGACGCTGTCGCCCGCAGGGATGTTTGAGCTCCGGGTCACTAAGCTaGAGAACTCCACTATGCTCGAGGACTTCCTCCTCACGACCTCCT +
Preference number: 5 (lower is better)
Translates to: GRCRPQGCLSSGSLS*RTPLCSRTSSSRPP
Trigger: AGGAGGTCGTGAGGAGGAAGTCCTCGAGCATAGTGGAGTTCTTCAGCTTAGTGACCCGGAGCTCAAACATCCCTGCGGGCGACAGCGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319338.6
ENST00000412229.2
ENST00000504981.5
ENST00000513874.6
CDS TCA 90 bp AAAACCAGGAGGCTCCAGCACACTAAGGTGCAGAGTGGCCGTGGCTaGGCCGTGGTCATTCTTGAGCTTGAGCAGGATGAGGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: KTRRLQHTKVQSGRG*AVVILELEQDEAAV
Trigger: GACAGCGGCCTCATCCTGCTCAAGCTCAAGAATGACCACGGCTCAGCCACGGCCACTCTGCACCTTAGTGTGCTGGAGCCTCCTGGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS GCA 90 bp GCTTCACTTTCCGTGCCCTTGGCCCGGAATGTGTACTTGCCCTCGTaGTCAGGGCCCATACTGGGAAAGATGAGCTTGTGCACTGCACCC +
Preference number: 5 (lower is better)
Translates to: ASLSVPLARNVYLPS*SGPILGKMSLCTAP
Trigger: GGGTGCAGTGCACAAGCTCATCTTTCCCAGTATGGGCCCTGAGCACGAGGGCAAGTACACATTCCGGGCCAAGGGCACGGAAAGTGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 90 bp CTCTTGGTAATTGTCTCTCGGCCCTTGGTGGGAACGCCATCTTTCTaGCAGATCACGTCAGGTGGTGGTGAGCCCTGGTGGTGGCATGGC +
Preference number: 5 (lower is better)
Translates to: LLVIVSRPLVGTPSF*QITSGGGEPWWWHG
Trigger: GCCATGCCACCACCAGGGCTCACCACCACCTGACGTGATCTGGCAGAAAGATGGCGTTCCCACCAAGGGCCGAGAGACAATTACCAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS CCA 90 bp TGTGTCCACGGCTTTGGAGGCTCAGCTAGTGCCTGGACTGTAGGGTaGCCCGTCTCCTTCTTCCTTTGCCCCAACAGTGAGGCTACCAGT +
Preference number: 5 (lower is better)
Translates to: CVHGFGGSASAWTVG*PVSFFLCPNSEATS
Trigger: ACTGGTAGCCTCACTGTTGGGGCAAAGGAAGAAGGAGACGGGCCACCCTACAGTCCAGGCACTAGCTGAGCCTCCAAAGCCGTGGACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS CCA 90 bp TCTGGGAGAAGGTCTGCACGTGGGTGGTGGAGCTGGAGAACTCCATaGACACGTGCTCCTGCAGCATCTGCCGGCTGTGAATGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: SGRRSARGWWSWRTP*TRAPAASAGCEWLS
Trigger: TGACAACCATTCACAGCCGGCAGATGCTGCAGGAGCACGTGTCCATGGAGTTCTCCAGCTCCACCACCCACGTGCAGACCTTCTCCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319338.6
ENST00000412229.2
ENST00000504981.5
ENST00000513874.6
CDS CCA 90 bp CCTCTCCCACGATCTTGGTTGTCTGGGAGAAGGTCTGCACGTGGGTaGTGGAGCTGGAGAACTCCATGGACACGTGCTCCTGCAGCATCT +
Preference number: 5 (lower is better)
Translates to: PLPRSWLSGRRSARG*WSWRTPWTRAPAAS
Trigger: AGATGCTGCAGGAGCACGTGTCCATGGAGTTCTCCAGCTCCACCACCCACGTGCAGACCTTCTCCCAGACAACCAAGATCGTGGGAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319338.6
ENST00000412229.2
ENST00000504981.5
ENST00000513874.6
CDS-3UTR CAA 90 bp CAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTAGGTTTGTGGGGCAGGAGATGTGGGGTTaGGCGTTCCCCTGCACCCGG +
Preference number: 5 (lower is better)
Translates to: QVRVTVLGTSSNNRRFVGQEMWG*AFPCTR
Trigger: CCGGGTGCAGGGGAACGCCAAACCCCACATCTCCTG...CCCCACAAACCTACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp GTCCTTCTTCTCGTAGGGCTTGAGCTTGGCGCTCAGGTCCTGGATCTGGTCCTTATCTTGGCGGACTCCTaGATGGGGATGCCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: VLLLVGLELGAQVLDLVLILADS*MGMPLS
Trigger: GGAGAGCGGCATCCCCATCAAGGAGTCCGCCAAGAT...AAGGACCAGATCCAGGACCTGAGCGCCAAGCTCAAGCCCTACGAGAAGAAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp CGGGTTCCCAAGGAAGGCGCAGGTCATGGTGCAGTCCTGGCCGCGGAGCACCGTAGTGGCTCAGTACCCTaGATCCATATCATCTTGACA +
Preference number: 5 (lower is better)
Translates to: RVPKEGAGHGAVLAAEHRSGSVP*IHIILT
Trigger: TGTCAAGATGATATGGATCAAGGGTACTGAGCCACT...ACGGTGCTCCGCGGCCAGGACTGCACCATGACCTGCGCCTTCCTTGGGAACCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp ACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGCTCGTTCTCCACCAGCACGAACTTCCACACAAAGTaGGGCTCTTTCTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: TVSVQLLRSLPSSFSTSTNFHTK*GSFLER
Trigger: CCTCTCCAAGAAAGAGCCCAACTTTGTGTGGAAGTT...CGTGCTGGTGGAGAACGAGCTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp ACACGCTCGGCTGCCGTGTACCAGGTGGCTGTGCTTGCATCCCGCTTCATGATGTCACTTTCCGTGCCCTaGGCCCGGAATGTGTACTTG +
Preference number: 5 (lower is better)
Translates to: TRSAAVYQVAVLASRFMMSLSVP*ARNVYL
Trigger: CAAGTACACATTCCGGGCCAAGGGCACGGAAAGTGA...CATCATGAAGCGGGATGCAAGCACAGCCACCTGGTACACGGCAGCCGAGCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp GCCGAGGGAAATCTGCCACGCGCACATGGATGTCATAGCGTGCTTCTCCAAACTCCCTGGATGGGGTCCTaGTTGACTGGCACCCACAGG +
Preference number: 5 (lower is better)
Translates to: AEGNLPRAHGCHSVLLQTPWMGS*LTGTHR
Trigger: CCTGTGGGTGCCAGTCAACAAGGACCCCATCCAGGG...AGTTTGGAGAAGCACGCTATGACATCCATGTGCGCGTGGCAGATTTCCCTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGCCATCCACAGTGCACTaGGTGCCCTGGATGGGGTCC +
Preference number: 5 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWPSTVH*VPWMGS
Trigger: GGACCCCATCCAGGGCACCAAGTGCACTGTGGATGG...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGATGGCACGGACCCCCTaGTCTAGCTCCACAGGCTCC +
Preference number: 5 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWMARTP*SSSTGS
Trigger: GGAGCCTGTGGAGCTAGACAAGGGGGTCCGTGCCAT...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS TCA 90 bp GCCTACCTTCACAGTGATGGCGTGCGCAGCCAGTGCCTCCAGTACTaGCGGGTCGATGGTAGGAGGATCTGCGATGAATACAGAGGCTTC +
Preference number: 5 (lower is better)
Translates to: AYLHSDGVRSQCLQY*RVDGRRICDEYRGF
Trigger: GAAGCCTCTGTATTCATCGCAGATCCTCCTACCATCGACCCGTCAGTACTGGAGGCACTGGCTGCGCACGCCATCACTGTGAAGGTAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS TCA 90 bp ACCATTGTCCTTTGGGGCCTTCCACTTCATGTGCACACAACTACCTaGGAGCTCCAGGAACTCCACCCGGCCCTGTGGAGGCTTTGGACG +
Preference number: 5 (lower is better)
Translates to: TIVLWGLPLHVHTTT*ELQELHPALWRLWT
Trigger: CGTCCAAAGCCTCCACAGGGCCGGGTGGAGTTCCTGGAGCTCTCAGGTAGTTGTGTGCACATGAAGTGGAAGGCCCCAAAGGACAATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS GCA 90 bp GCCCTCGTGCTCAGGGCCCATACTGGGAAAGATGAGCTTGTGCACTaGACCCTGCTTCACAATCTGCATGCCTGGCAAGTCCGTGATCTC +
Preference number: 5 (lower is better)
Translates to: ALVLRAHTGKDELVH*TLLHNLHAWQVRDL
Trigger: GAGATCACGGACTTGCCAGGCATGCAGATTGTGAAGCAGGGTGCAGTGCACAAGCTCATCTTTCCCAGTATGGGCCCTGAGCACGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 90 bp GTCACAGGTCGTCCACCATTGTCCTTTGGGGCCTTCCACTTCATGTaGACACAACTACCTGAGAGCTCCAGGAACTCCACCCGGCCCTGT +
Preference number: 5 (lower is better)
Translates to: VTGRPPLSFGAFHFM*TQLPESSRNSTRPC
Trigger: ACAGGGCCGGGTGGAGTTCCTGGAGCTCTCAGGTAGTTGTGTGCACATGAAGTGGAAGGCCCCAAAGGACAATGGTGGACGACCTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS CCA 90 bp ACACTCGAATGCTGTGTCCACGGCTTTGGAGGCTCAGCTAGTGCCTaGACTGTAGGGTGGCCCGTCTCCTTCTTCCTTTGCCCCAACAGT +
Preference number: 5 (lower is better)
Translates to: TLECCVHGFGGSASA*TVGWPVSFFLCPNS
Trigger: ACTGTTGGGGCAAAGGAAGAAGGAGACGGGCCACCCTACAGTCCAGGCACTAGCTGAGCCTCCAAAGCCGTGGACACAGCATTCGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS CCA 90 bp CAGGTTGCTGCCTTTCTTCCTTCGTTCTACAATGTAGCCGAGCACTaGGGCTCCCCCATCCTGGGTAGGGGCATTCCACGTGATGGTCAC +
Preference number: 5 (lower is better)
Translates to: QVAAFLPSFYNVAEH*GSPILGRGIPRDGH
Trigger: GTGACCATCACGTGGAATGCCCCTACCCAGGATGGGGGAGCCCCAGTGCTCGGCTACATTGTAGAACGAAGGAAGAAAGGCAGCAACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS-3UTR CAA 90 bp GTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCTCCTGCATGGTCATTGCTaGCAATGCACTTATAGTTGT +
Preference number: 5 (lower is better)
Translates to: VWLEGRHEARRVAPVLLLLHGHC*QCTYSC
Trigger: ACAACTATAAGTGCATTGCAAGCAATGACCATGCAG...GAGAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp AGTGAGCCTCACCGTCCTCCTGCACATCTGGGCTGTGGTTCCAGGTCAGAGTCAACGCCGCTGGTGGAGTaGTACCAGAACTTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: SEPHRPPAHLGCGSRSESTPLVE*YQNLEL
Trigger: CAACTCCAAGTTCTGGTACAACTCCACCAGCGGCGT...TGACTCTGACCTGGAACCACAGCCCAGATGTGCAGGAGGACGGTGAGGCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS TCA 90 bp CCTGGGCCTCTGTTCCAAGGACCTCACCCTGGATGGGGTCCTTGTTaGCTGGCACCCACAGGTTGCTGCCTTTCTTCCTTCGTTCTACAA +
Preference number: 5 (lower is better)
Translates to: PGPLFQGPHPGWGPC*LAPTGCCLSSFVLQ
Trigger: TTGTAGAACGAAGGAAGAAAGGCAGCAACCTGTGGGTGCCAGTCAACAAGGACCCCATCCAGGGTGAGGTCCTTGGAACAGAGGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504981.5
CDS GCA 90 bp TACTTGCCCTCGTGCTCAGGGCCCATACTGGGAAAGATGAGCTTGTaGACTGCACCCTGCTTCACAATCTGCATGCCTGGCAAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: YLPSCSGPILGKMSL*TAPCFTICMPGKSV
Trigger: CACGGACTTGCCAGGCATGCAGATTGTGAAGCAGGGTGCAGTGCACAAGCTCATCTTTCCCAGTATGGGCCCTGAGCACGAGGGCAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 90 bp CTCTTGGTAATTGTCTCTCGGCCCTTGGTGGGAACGCCATCTTTCTaGCAGATCACGTCAGGTGGTGGTGAGCCAGAGAAGGCTGCATGG +
Preference number: 5 (lower is better)
Translates to: LLVIVSRPLVGTPSF*QITSGGGEPEKAAW
Trigger: CCATGCAGCCTTCTCTGGCTCACCACCACCTGACGTGATCTGGCAGAAAGATGGCGTTCCCACCAAGGGCCGAGAGACAATTACCAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS CCA 90 bp GCATCAGCAGCTGCCCATCCTTCTTCCAGCGCAGTGTCACATCCTTaGATGTCAGCTCACACTCCAGGCATGCGCGACTCCTCTCTTTCA +
Preference number: 5 (lower is better)
Translates to: ASAAAHPSSSAVSHP*MSAHTPGMRDSSLS
Trigger: TGAAAGAGAGGAGTCGCGCATGCCTGGAGTGTGAGCTGACATCCAAGGATGTGACACTGCGCTGGAAGAAGGATGGGCAGCTGCTGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CCA 90 bp GGGACTGTGTCAGTAGTTAATGGGTCCACTCAGCAAGACCTCCTTTaGTCACTCCTGGGCCTCTGTTCCAAGGACCTCACCCTGGATGGG +
Preference number: 5 (lower is better)
Translates to: GTVSVVNGSTQQDLL*SLLGLCSKDLTLDG
Trigger: CCCATCCAGGGTGAGGTCCTTGGAACAGAGGCCCAGGAGTGACCAAAGGAGGTCTTGCTGAGTGGACCCATTAACTACTGACACAGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504981.5
CDS-3UTR CAA 90 bp GCCGAGGGAAATCTGCCACGCGCACATGGATGTCATAGCGTGCTTCTCCAAACTTTCTTCTGCTTCTTCTaGGGAGCAGGGGGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: AEGNLPRAHGCHSVLLQTFFCFF*GAGGAL
Trigger: GAGGGCACCCCCTGCTCCCAAGAAGAAGCAGAAGAA...AGTTTGGAGAAGCACGCTATGACATCCATGTGCGCGTGGCAGATTTCCCTCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp GTGTGGCTTGAGGGGCGTCACGAAGCGCGGCGCGTGGCGCCAGTCCTTCTTCTCCATATCATCTTGACATaGGGGTCTTTCAGTTCCATT +
Preference number: 5 (lower is better)
Translates to: VWLEGRHEARRVAPVLLLHIILT*GSFSSI
Trigger: AATGGAACTGAAAGACCCCAATGTCAAGATGATATG...GAGAAGAAGGACTGGCGCCACGCGCCGCGCTTCGTGACGCCCCTCAAGCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp GTCGCCCTTGTAGAGGGTCACTGTGGGCCGCGGGTTCCCAAGGAAGGCGCAGGTTCGTTCATGTTCACGTaGCTAATAACCAGCATGTAC +
Preference number: 5 (lower is better)
Translates to: VALVEGHCGPRVPKEGAGSFMFT*LITSMY
Trigger: GTACATGCTGGTTATTAGCAACGTGAACATGAACGA...ACCTGCGCCTTCCTTGGGAACCCGCGGCCCACAGTGACCCTCTACAAGGGCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp ACGCCGCTGGTGGAGTTGTACCAGAACTTGGAGTTGGCCGTGATGTTGACGTCGACTGGCACCCACAGGTaGCTGCCTTTCTTCCTTCGT +
Preference number: 5 (lower is better)
Translates to: TPLVELYQNLELAVMLTSTGTHR*LPFFLR
Trigger: ACGAAGGAAGAAAGGCAGCAACCTGTGGGTGCCAGT...CGACGTCAACATCACGGCCAACTCCAAGTTCTGGTACAACTCCACCAGCGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS TCA 90 bp GGAATGTGTACTTGCCCTCGTGCTCAGGGCCCATACTGGGAAAGATaGGCTTGTGCACTGCACCCTGCTTCACAATCTGCATGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: GMCTCPRAQGPYWER*ACALHPASQSACLA
Trigger: TGCCAGGCATGCAGATTGTGAAGCAGGGTGCAGTGCACAAGCTCATCTTTCCCAGTATGGGCCCTGAGCACGAGGGCAAGTACACATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 90 bp AGCTCTGCTCGCTTGCCCTCATGGTTCATGCTGTACTTAGTGCCATaGATCAGCAGCTGCCCATCCTTCTTCCAGCGCAGTGTCACATCC +
Preference number: 5 (lower is better)
Translates to: SSARLPSWFMLYLVP*ISSCPSFFQRSVTS
Trigger: GGATGTGACACTGCGCTGGAAGAAGGATGGGCAGCTGCTGATGCATGGCACTAAGTACAGCATGAACCATGAGGGCAAGCGAGCAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 90 bp TGCTCAGGGCCCATACTGGGAAAGATGAGCTTGTGCACTGCACCCTaGTTCACAATCTGCATGCCTGGCAAGTCCGTGATCTCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: CSGPILGKMSLCTAP*FTICMPGKSVISLP
Trigger: TGGCAAGGAGATCACGGACTTGCCAGGCATGCAGATTGTGAAGCAGGGTGCAGTGCACAAGCTCATCTTTCCCAGTATGGGCCCTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS-3UTR CAA 90 bp ACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGCTCGTTCTCCACCAGCACGTTCACACGTACATTTTaGAGGTTGCTCACAAACTTG +
Preference number: 5 (lower is better)
Translates to: TVSVQLLRSLPSSFSTSTFTRTF*RLLTNL
Trigger: CAAGTTTGTGAGCAACCTCAAAAATGTACGTGTGAA...CGTGCTGGTGGAGAACGAGCTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp CATGATGATGTAGTGAGCCTCACCGTCCTCCTGCACATCTGGGCTGTGGTTCCACGCAGTGTCACATCCTaGGATGTCAGCTCACACTCC +
Preference number: 5 (lower is better)
Translates to: HDDVVSLTVLLHIWAVVPRSVTS*DVSSHS
Trigger: GGAGTGTGAGCTGACATCCAAGGATGTGACACTGCG...TGGAACCACAGCCCAGATGTGCAGGAGGACGGTGAGGCTCACTACATCATCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGCGCAGTGTCACATCCTaGGATGTCAGCTCACACTCC +
Preference number: 5 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWRSVTS*DVSSHS
Trigger: GGAGTGTGAGCTGACATCCAAGGATGTGACACTGCG...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp GCTGGAGCTCACATGAGGTGCTTTGATTTCTTCTGCAGACTCTCGGTGATGGATATGGCACGGACCCCCTaGTCTAGCTCCACAGGCTCC +
Preference number: 5 (lower is better)
Translates to: AGAHMRCFDFFCRLSVMDMARTP*SSSTGS
Trigger: GGAGCCTGTGGAGCTAGACAAGGGGGTCCGTGCCAT...ATCCATCACCGAGAGTCTGCAGAAGAAATCAAAGCACCTCATGTGAGCTCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGATTGTCTCTCGGCCCTaGGTGGGAACGCCATCTTTC +
Preference number: 5 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWIVSRP*VGTPSF
Trigger: GAAAGATGGCGTTCCCACCAAGGGCCGAGAGACAAT...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS TCA 90 bp CATCCACAGTGCACTTGGTGCCTGAAATGGGAAGATGAGGGGTCGTaGGGCCAGAGGCATCCATGGGGTGAGAACAAGAGTGAGAGACAT +
Preference number: 5 (lower is better)
Translates to: HPQCTWCLKWEDEGS*GQRHPWGENKSERH
Trigger: ATGTCTCTCACTCTTGTTCTCACCCCATGGATGCCTCTGGCCTCACGACCCCTCATCTTCCCATTTCAGGCACCAAGTGCACTGTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504981.5
CDS GCA 90 bp ATCCTGCATGGCCACCACAGTGTACTCGCCACCATCACTGAGCTGTaGATCCTCAATGATCAGCTCTGCTCGCTTGCCCTCATGGTTCAT +
Preference number: 5 (lower is better)
Translates to: ILHGHHSVLATITEL*ILNDQLCSLALMVH
Trigger: ATGAACCATGAGGGCAAGCGAGCAGAGCTGATCATTGAGGATGCACAGCTCAGTGATGGTGGCGAGTACACTGTGGTGGCCATGCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CCA 90 bp CTGAGCTGTGCATCCTCAATGATCAGCTCTGCTCGCTTGCCCTCATaGTTCATGCTGTACTTAGTGCCATGCATCAGCAGCTGCCCATCC +
Preference number: 5 (lower is better)
Translates to: LSCASSMISSARLPS*FMLYLVPCISSCPS
Trigger: GGATGGGCAGCTGCTGATGCATGGCACTAAGTACAGCATGAACCATGAGGGCAAGCGAGCAGAGCTGATCATTGAGGATGCACAGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CCA 90 bp GGCCTCTGTTCCAAGGACCTCACCCTGGATGGGGTCCTTGTTGACTaGCACCCACAGGTTGCTGCCTTTCTTCCTTCGTTCTACAATGTA +
Preference number: 5 (lower is better)
Translates to: GLCSKDLTLDGVLVD*HPQVAAFLPSFYNV
Trigger: TACATTGTAGAACGAAGGAAGAAAGGCAGCAACCTGTGGGTGCCAGTCAACAAGGACCCCATCCAGGGTGAGGTCCTTGGAACAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504981.5
CDS-3UTR CAA 90 bp GGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTACTGGGAAAGATGAGCTaGTGCACTGCACCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: GCGSRSESLCWGLPQTTVLGKMS*CTAPCF
Trigger: GAAGCAGGGTGCAGTGCACAAGCTCATCTTTCCCAG...TACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGGTCACTGTGTACTTGTaGCTGAAGACACGCTCGGCT +
Preference number: 5 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWVTVYL*LKTRSA
Trigger: AGCCGAGCGTGTCTTCAGCAACAAGTACACAGTGAC...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp CTTATCATCTTTGTCATAGACGGTGAGCGTGCAGCTGCTGCGGTCCTTGCCCAGTACCAGAACTTGGAGTaGGCCGTGATGTTGACGTCG +
Preference number: 5 (lower is better)
Translates to: LIIFVIDGERAAAAVLAQYQNLE*AVMLTS
Trigger: CGACGTCAACATCACGGCCAACTCCAAGTTCTGGTA...CTGGGCAAGGACCGCAGCAGCTGCACGCTCACCGTCTATGACAAAGATGATAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGTACCAGAACTTGGAGTaGGCCGTGATGTTGACGTCG +
Preference number: 5 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWYQNLE*AVMLTS
Trigger: CGACGTCAACATCACGGCCAACTCCAAGTTCTGGTA...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS TCA 90 bp CCTCATTCACAGCCCGGATTCGGAAGAAGTATTTCTGCCTCTCGATaGGTCCTCCCACTGTGTAGCAGGTGCCTGAGATGGGGATCTTTG +
Preference number: 5 (lower is better)
Translates to: PHSQPGFGRSISASR*VLPLCSRCLRWGSL
Trigger: CAAAGATCCCCATCTCAGGCACCTGCTACACAGTGGGAGGACTCATCGAGAGGCAGAAATACTTCTTCCGAATCCGGGCTGTGAATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 90 bp TCAGCTAGTGCCTGGACTGTAGGGTGGCCCGTCTCCTTCTTCCTTTaGCCCAACAGTGAGGCTACCAGTGTCATCTGTTCCTTAAATGTC +
Preference number: 5 (lower is better)
Translates to: SASAWTVGWPVSFFL*PNSEATSVICSLNV
Trigger: GACATTTAAGGAACAGATGACACTGGTAGCCTCACTGTTGGGGCAAAGGAAGAAGGAGACGGGCCACCCTACAGTCCAGGCACTAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS GCA 90 bp TTGCCCTCATGGTTCATGCTGTACTTAGTGCCATGCATCAGCAGCTaGCCATCCTTCTTCCAGCGCAGTGTCACATCCTTGGATGTCAGC +
Preference number: 5 (lower is better)
Translates to: LPSWFMLYLVPCISS*PSFFQRSVTSLDVS
Trigger: GCTGACATCCAAGGATGTGACACTGCGCTGGAAGAAGGATGGGCAGCTGCTGATGCATGGCACTAAGTACAGCATGAACCATGAGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CCA 90 bp ACCATCCACAGTGCACTTGGTGCCCTGGATGGGGTCCTTGTTGACTaGCACCCACAGGTTGCTGCCTTTCTTCCTTCGTTCTACAATGTA +
Preference number: 5 (lower is better)
Translates to: TIHSALGALDGVLVD*HPQVAAFLPSFYNV
Trigger: TACATTGTAGAACGAAGGAAGAAAGGCAGCAACCTGTGGGTGCCAGTCAACAAGGACCCCATCCAGGGCACCAAGTGCACTGTGGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS CCA 90 bp CTCCCACTGTGTAGCAGGTGCCTGAGATGGGGATCTTTGTGCACTTaGACCACTCCTTTGTGTCTTCAGCCCTCATCTCAAGGATGTAGC +
Preference number: 5 (lower is better)
Translates to: LPLCSRCLRWGSLCT*TTPLCLQPSSQGCS
Trigger: GCTACATCCTTGAGATGAGGGCTGAAGACACAAAGGAGTGGTCCAAGTGCACAAAGATCCCCATCTCAGGCACCTGCTACACAGTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS-3UTR CAA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGGGCGCGGTGACCGGTaGAGGCTTCTCCACGAACTC +
Preference number: 5 (lower is better)
Translates to: CPIPSLNVYINKHQRANWGRGDR*RLLHEL
Trigger: GAGTTCGTGGAGAAGCCTCAACCGGTCACCGCGCCC...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp GGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTTCAACCTTGGTCTCTTaGTCTTCCAGGGGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: GLWFQVRVTVLGTSSNNRSTLVS*SSRGFR
Trigger: TCTGAAGCCCCTGGAAGACAAAGAGACCAAGGTTGA...ACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp GCTGAAGACACGCTCGGCTGCCGTGTACCAGGTGGCTGTGCTTGCATCCCGCTTTTGATCCATATCATCTaGACATTGGGGTCTTTCAGT +
Preference number: 5 (lower is better)
Translates to: AEDTLGCRVPGGCACIPLLIHII*TLGSFS
Trigger: ACTGAAAGACCCCAATGTCAAGATGATATGGATCAA...AAGCGGGATGCAAGCACAGCCACCTGGTACACGGCAGCCGAGCGTGTCTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp GGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTATGCTTCACATCGTACTaGCCCAGGGAGTACTGGATC +
Preference number: 5 (lower is better)
Translates to: GCGSRSESLCWGLPQTTVCFTSY*PREYWI
Trigger: GATCCAGTACTCCCTGGGCAAGTACGATGTGAAGCA...TACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp GAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGAGCTCACATAAGTCCGTGATCTCCTaGCCATCCTTCAGCCACACA +
Preference number: 5 (lower is better)
Translates to: ETPHHNSLLMPGLGWSSHKSVIS*PSFSHT
Trigger: TGTGTGGCTGAAGGATGGCAAGGAGATCACGGACTT...ATGTGAGCTCCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCCCGGAATGTGTACTaGCCCTCGTGCTCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: CPIPSLNVYINKHQRANWARNVY*PSCSGP
Trigger: GGGCCCTGAGCACGAGGGCAAGTACACATTCCGGGC...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGGGTTTAACAGGATCCTaGGCCACTACTGAGCTGGAT +
Preference number: 5 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWGLTGS*ATTELD
Trigger: ATCCAGCTCAGTAGTGGCCAAGGATCCTGTTAAACC...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGAGCACCGTGTGTGGCTaGAGGGGCGTCACGAAGCGC +
Preference number: 5 (lower is better)
Translates to: CPIPSLNVYINKHQRANWSTVCG*RGVTKR
Trigger: GCGCTTCGTGACGCCCCTCAAGCCACACACGGTGCT...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGCAGCTGCTGCGGTCCTaGCCCAGCTCGTTCTCCACC +
Preference number: 5 (lower is better)
Translates to: CPIPSLNVYINKHQRANWQLLRS*PSSFST
Trigger: GGTGGAGAACGAGCTGGGCAAGGACCGCAGCAGCTG...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS TCA 90 bp GCATTCCACGTGATGGTCACGGCTTCTTTAGTCACATCAGTCACTTaGGGCTGGGAGGCAAAACCAGGAGGCTCTATGGGATTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: AFHVMVTASLVTSVT*GWEAKPGGSMGFPA
Trigger: TGCAGGAAATCCCATAGAGCCTCCTGGTTTTGCCTCCCAGCCTCAAGTGACTGATGTGACTAAAGAAGCCGTGACCATCACGTGGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS GCA 90 bp GTACTCGCCACCATCACTGAGCTGTGCATCCTCAATGATCAGCTCTaGTCGCTTGCCCTCATGGTTCATGCTGTACTTAGTGCCATGCAT +
Preference number: 5 (lower is better)
Translates to: VLATITELCILNDQL*SLALMVHAVLSAMH
Trigger: ATGCATGGCACTAAGTACAGCATGAACCATGAGGGCAAGCGAGCAGAGCTGATCATTGAGGATGCACAGCTCAGTGATGGTGGCGAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 90 bp TTTGCCGTCCACCTCGCCTATCTTAATCCAGGACTTCTTGCCAACTaGCCTCCGTTCCACTATGAACTGTGTCACAGGTCGTCCACCATT +
Preference number: 5 (lower is better)
Translates to: FAVHLAYLNPGLLAN*PPFHYELCHRSSTI
Trigger: AATGGTGGACGACCTGTGACACAGTTCATAGTGGAACGGAGGGCAGTTGGCAAGAAGTCCTGGATTAAGATAGGCGAGGTGGACGGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS-3UTR CAA 90 bp TCCTCCTGCACATCTGGGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCTTTCTTGGGCACTTaGGACAAAATCTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: SSCTSGLWFQVRVTVLGTSFLGT*DKISSI
Trigger: GATGCTGGAGATTTTGTCCAAAGTGCCCAAGAAAGA...AGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCCCAGATGTGCAGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGAACTTCCACACAAAGTaGGGCTCTTTCTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWNFHTK*GSFLER
Trigger: CCTCTCCAAGAAAGAGCCCAACTTTGTGTGGAAGTT...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTCCCTGGATGGGGTCCTaGTTGACTGGCACCCACAGG +
Preference number: 5 (lower is better)
Translates to: PIPSLNVYINKHQRANWAPWMGS*LTGTHR
Trigger: CCTGTGGGTGCCAGTCAACAAGGACCCCATCCAGGG...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp GGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTAGGTTTAACAGGATCCTaGGCCACTACTGAGCTGGAT +
Preference number: 5 (lower is better)
Translates to: GCGSRSESLCWGLPQTTVGLTGS*ATTELD
Trigger: ATCCAGCTCAGTAGTGGCCAAGGATCCTGTTAAACC...TACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp GCCGAGGGAAATCTGCCACGCGCACATGGATGTCATAGCGTGCTTCTCCAAACTAGGGAAATGCTGGAGTaGGAGGAATCAGATACATGC +
Preference number: 5 (lower is better)
Translates to: AEGNLPRAHGCHSVLLQTREMLE*EESDTC
Trigger: GCATGTATCTGATTCCTCCAACTCCAGCATTTCCCT...AGTTTGGAGAAGCACGCTATGACATCCATGTGCGCGTGGCAGATTTCCCTCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp GCTGGAGCTCACATGAGGTGCTTTGATTTCTTCTGCAGACTCTCGGTGATGGATATTGTCTCTCGGCCCTaGGTGGGAACGCCATCTTTC +
Preference number: 5 (lower is better)
Translates to: AGAHMRCFDFFCRLSVMDIVSRP*VGTPSF
Trigger: GAAAGATGGCGTTCCCACCAAGGGCCGAGAGACAAT...ATCCATCACCGAGAGTCTGCAGAAGAAATCAAAGCACCTCATGTGAGCTCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGTGTCCACGGCTTaGGAGGCTCAGCTAGTGCCT +
Preference number: 5 (lower is better)
Translates to: CPIPSLNVYINKHQRANWAVSTA*EAQLVP
Trigger: AGGCACTAGCTGAGCCTCCAAAGCCGTGGACACAGC...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCACAGGAGATGTGGGGTTaGGCGTTCCCCTGCACCCGG +
Preference number: 5 (lower is better)
Translates to: VYCPIPSLNVYINKHQRAQEMWG*AFPCTR
Trigger: CCGGGTGCAGGGGAACGCCAAACCCCACATCTCCTG...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp GGCTGTGGTTCCAGGTCAGAGTCACTGTGTTGGGGACTTCCTCAAACAACCGTAATAACCAGCATGTACTaGGTGCCCATCTGCTTCACA +
Preference number: 5 (lower is better)
Translates to: GCGSRSESLCWGLPQTTVITSMY*VPICFT
Trigger: TGTGAAGCAGATGGGCACCAAGTACATGCTGGTTAT...TACGGTTGTTTGAGGAAGTCCCCAACACAGTGACTCTGACCTGGAACCACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGAGTGAGCTGGGCCTTTaGTACCAGGTTCCCCGCCTC +
Preference number: 5 (lower is better)
Translates to: CPIPSLNVYINKHQRANWSELGL*YQVPRL
Trigger: GAGGCGGGGAACCTGGTACAAAAGGCCCAGCTCACT...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTAGTGAGCTGGGCCTTTaGTACCAGGTTCCCCGCCTC +
Preference number: 5 (lower is better)
Translates to: PIPSLNVYINKHQRANWASELGL*YQVPRL
Trigger: GAGGCGGGGAACCTGGTACAAAAGGCCCAGCTCACT...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp AGCGTGCTTCTCCAAACTCATTCTGAAGCAAGATTCGGTACACCCCTGAGTCAGAGTCACATCAGTCACTaGAGGCTGGGAGGCAAAACC +
Preference number: 5 (lower is better)
Translates to: SVLLQTHSEARFGTPLSQSHISH*RLGGKT
Trigger: GGTTTTGCCTCCCAGCCTCAAGTGACTGATGTGACT...CTGACTCAGGGGTGTACCGAATCTTGCTTCAGAATGAGTTTGGAGAAGCACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp AGGGAAATCTGCCACGCGCACATGGATGTCATAGCGTGCTTCTCCAAACTCATTGTCACTGTGTACTTGTaGCTGAAGACACGCTCGGCT +
Preference number: 5 (lower is better)
Translates to: REICHAHMDVIACFSKLIVTVYL*LKTRSA
Trigger: AGCCGAGCGTGTCTTCAGCAACAAGTACACAGTGAC...AATGAGTTTGGAGAAGCACGCTATGACATCCATGTGCGCGTGGCAGATTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp GCCGAGGGAAATCTGCCACGCGCACATGGATGTCATAGCGTGCTTCTCCAAACTGATGAGTTACGTTTATaGCCCCATCCCTTCACTGAA +
Preference number: 5 (lower is better)
Translates to: AEGNLPRAHGCHSVLLQTDELRL*PHPFTE
Trigger: TTCAGTGAAGGGATGGGGCAATAAACGTAACTCATC...AGTTTGGAGAAGCACGCTATGACATCCATGTGCGCGTGGCAGATTTCCCTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGCACTGAGGTCAAACTaGGGTGCAGCTGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: PIPSLNVYINKHQRANWAALRSN*GAAGGG
Trigger: GCCACCACCAGCTGCACCCAAGTTTGACCTCAGTGC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS TCA 90 bp CAAACACTTCTTCTGTCTCCAGTGGGTCACTCACACCTTCTGAATTaGCTGCCAGGATACGGAACTGGTAGGCTTTTCCCTCTTCCACCT +
Preference number: 5 (lower is better)
Translates to: QTLLLSPVGHSHLLN*LPGYGTGRLFPLPP
Trigger: AGGTGGAAGAGGGAAAAGCCTACCAGTTCCGTATCCTGGCAGTCAATTCAGAAGGTGTGAGTGACCCACTGGAGACAGAAGAAGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS GCA 90 bp TTCATGTTCACGTTGCTAATAACCAGCATGTACTTGGTGCCCATCTaGTTCACATCGTACTTGCCCAGGGAGTACTGGATCCTCAGTGGC +
Preference number: 5 (lower is better)
Translates to: FMFTLLITSMYLVPI*FTSYLPREYWILSG
Trigger: GCCACTGAGGATCCAGTACTCCCTGGGCAAGTACGATGTGAAGCAGATGGGCACCAAGTACATGCTGGTTATTAGCAACGTGAACATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 90 bp AACTCGCCGCTGTCACTGAGTCTGGCATCCTTAATCTTAAGCGTGTaGGTCAGACCATCTTCGGACACCGTGATTTCATACTTGTCATCC +
Preference number: 5 (lower is better)
Translates to: NSPLSLSLASLILSV*VRPSSDTVISYLSS
Trigger: GGATGACAAGTATGAAATCACGGTGTCCGAAGATGGTCTGACGCACACGCTTAAGATTAAGGATGCCAGACTCAGTGACAGCGGCGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CCA 90 bp CTTTCAGTTCCATTATGCAGTCAAAGACCACTGTGGTGTCAACCTTaGTCTCTTTGTCTTCCAGGGGCTTCAGAATCCGGATGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: LSVPLCSQRPLWCQP*SLCLPGASESGWPP
Trigger: TGGAGGCCATCCGGATTCTGAAGCCCCTGGAAGACAAAGAGACCAAGGTTGACACCACAGTGGTCTTTGACTGCATAATGGAACTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CCA 90 bp TACTTGGTGCCCATCTGCTTCACATCGTACTTGCCCAGGGAGTACTaGATCCTCAGTGGCTCAGTACCCTTGATCCATATCATCTTGACA +
Preference number: 5 (lower is better)
Translates to: YLVPICFTSYLPREY*ILSGSVPLIHIILT
Trigger: TGTCAAGATGATATGGATCAAGGGTACTGAGCCACTGAGGATCCAGTACTCCCTGGGCAAGTACGATGTGAAGCAGATGGGCACCAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS-3UTR CAA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGGGCGCGGTGACCGGTaGAGGCTTCTCCACGAACTC +
Preference number: 5 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRGRGDR*RLLHEL
Trigger: GAGTTCGTGGAGAAGCCTCAACCGGTCACCGCGCCC...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTTTCTTCTGCTTCTTCTaGGGAGCAGGGGGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: PIPSLNVYINKHQRANWAFFCFF*GAGGAL
Trigger: GAGGGCACCCCCTGCTCCCAAGAAGAAGCAGAAGAA...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp GAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGAGCTCACATCGTACATTTTTGAGGTaGCTCACAAACTTGATGGGG +
Preference number: 5 (lower is better)
Translates to: ETPHHNSLLMPGLGWSSHRTFLR*LTNLMG
Trigger: CCCCATCAAGTTTGTGAGCAACCTCAAAAATGTACG...ATGTGAGCTCCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp GTGGTTTTTGCTCTTGGTAATTGTCTCTCGGCCCTTGGTGGGAACGCCATCTTTGGGATCTTTGTGCACTaGGACCACTCCTTTGTGTCT +
Preference number: 5 (lower is better)
Translates to: VVFALGNCLSALGGNAIFGIFVH*DHSFVS
Trigger: AGACACAAAGGAGTGGTCCAAGTGCACAAAGATCCC...AAAGATGGCGTTCCCACCAAGGGCCGAGAGACAATTACCAAGAGCAAAAACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp GTGGTTTTTGCTCTTGGTAATTGTCTCTCGGCCCTTGGTGGGAACGCCATCTTTGAGTGGTTTTTGCTCTaGGTAATTGTCTCTCGGCCC +
Preference number: 5 (lower is better)
Translates to: VVFALGNCLSALGGNAIFEWFLL*VIVSRP
Trigger: GGGCCGAGAGACAATTACCAAGAGCAAAAACCACTC...AAAGATGGCGTTCCCACCAAGGGCCGAGAGACAATTACCAAGAGCAAAAACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp AGCGTGCTTCTCCAAACTCATTCTGAAGCAAGATTCGGTACACCCCTGAGTCAGCCTGAGTCAGAGCGCTaGGTGCTATTAATGAGGAAC +
Preference number: 5 (lower is better)
Translates to: SVLLQTHSEARFGTPLSQPESER*VLLMRN
Trigger: GTTCCTCATTAATAGCACCAAGCGCTCTGACTCAGG...CTGACTCAGGGGTGTACCGAATCTTGCTTCAGAATGAGTTTGGAGAAGCACGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGACAGGTCGTCCACCATaGTCCTTTGGGGCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: CPIPSLNVYINKHQRANWTGRPP*SFGAFH
Trigger: GTGGAAGGCCCCAAAGGACAATGGTGGACGACCTGT...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR CAA 90 bp ACAGGCCAAGAAACTCCACATCATAACAGCCTCCTGATGCCTGGGCTTGGCTGGTTCTCAAAGTCTTTCTaGGGCACTTTGGACAAAATC +
Preference number: 5 (lower is better)
Translates to: TGQETPHHNSLLMPGLGWFSKSF*GTLDKI
Trigger: GATTTTGTCCAAAGTGCCCAAGAAAGACTTTGAGAA...CCAGCCAAGCCCAGGCATCAGGAGGCTGTTATGATGTGGAGTTTCTTGGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp TGCCACGCGCACATGGATGTCATAGCGTGCTTCTCCAAACTCATTCTGAAGCAAACCGTGATTTCATACTaGTCATCCCTCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CHAHMDVIACFSKLILKQTVISY*SSLFSS
Trigger: GGAGCTGAAGAGGGATGACAAGTATGAAATCACGGT...TTGCTTCAGAATGAGTTTGGAGAAGCACGCTATGACATCCATGTGCGCGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGCTGGGAAAGATGAGCTaGTGCACTGCACCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: CPIPSLNVYINKHQRANWLGKMS*CTAPCF
Trigger: GAAGCAGGGTGCAGTGCACAAGCTCATCTTTCCCAG...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGAGCCGTGGTCATTCTaGAGCTTGAGCAGGATGAGG +
Preference number: 5 (lower is better)
Translates to: PIPSLNVYINKHQRANWAEPWSF*SLSRMR
Trigger: CCTCATCCTGCTCAAGCTCAAGAATGACCACGGCTC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTACGCCGCTGGTGGAGTaGTACCAGAACTTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: PIPSLNVYINKHQRANWATPLVE*YQNLEL
Trigger: CAACTCCAAGTTCTGGTACAACTCCACCAGCGGCGT...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS GCA 90 bp GCAGAGATACGGTATAGATGGCATCTGCATGGTCATTGCTTGCAATaGACTTATAGTTGTCAGAGTCATCCGAAGTCAGTGGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: AEIRYRWHLHGHCLQ*TYSCQSHPKSVAPA
Trigger: AGCTGGAGCCACTGACTTCGGATGACTCTGACAACTATAAGTGCATTGCAAGCAATGACCATGCAGATGCCATCTATACCGTATCTCTGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS-3UTR CAA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCTGTGTCCACGGCTTaGGAGGCTCAGCTAGTGCCT +
Preference number: 5 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRAVSTA*EAQLVP
Trigger: AGGCACTAGCTGAGCCTCCAAAGCCGTGGACACAGC...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp GCTGGAGCTCACATGAGGTGCTTTGATTTCTTCTGCAGACTCTCGGTGATGGATGAAGTCCATTTTCTCTaGACCTTCTGTTACCAGCAG +
Preference number: 5 (lower is better)
Translates to: AGAHMRCFDFFCRLSVMDEVHFL*TFCYQQ
Trigger: CTGCTGGTAACAGAAGGTCAAGAGAAAATGGACTTC...ATCCATCACCGAGAGTCTGCAGAAGAAATCAAAGCACCTCATGTGAGCTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTTGCTTCACATCGTACTaGCCCAGGGAGTACTGGATC +
Preference number: 5 (lower is better)
Translates to: PIPSLNVYINKHQRANWACFTSY*PREYWI
Trigger: GATCCAGTACTCCCTGGGCAAGTACGATGTGAAGCA...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp GTGGTTTTTGCTCTTGGTAATTGTCTCTCGGCCCTTGGTGGGAACGCCATCTTTTTCAGCTCCTTCCCATaGAACTTCCACACAAAGTTG +
Preference number: 5 (lower is better)
Translates to: VVFALGNCLSALGGNAIFFSSFP*NFHTKL
Trigger: CAACTTTGTGTGGAAGTTCAATGGGAAGGAGCTGAA...AAAGATGGCGTTCCCACCAAGGGCCGAGAGACAATTACCAAGAGCAAAAACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTAGTCACATCAGTCACTaGAGGCTGGGAGGCAAAACC +
Preference number: 5 (lower is better)
Translates to: PIPSLNVYINKHQRANWASHISH*RLGGKT
Trigger: GGTTTTGCCTCCCAGCCTCAAGTGACTGATGTGACT...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGTCCACCATTGTCCTTaGGGGCCTTCCACTTCATGT +
Preference number: 5 (lower is better)
Translates to: PIPSLNVYINKHQRANWAVHHCP*GPSTSC
Trigger: ACATGAAGTGGAAGGCCCCAAAGGACAATGGTGGAC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS TCA 90 bp AAGAGGAGGTCATGGGATGTTGTTAAAACTTCCAGAAGAGTTGGATaGGGGACTGTGTCAGTAGTTAATGGGTCCACTCAGCAAGACCTC +
Preference number: 5 (lower is better)
Translates to: KRRSWDVVKTSRRVG*GTVSVVNGSTQQDL
Trigger: GAGGTCTTGCTGAGTGGACCCATTAACTACTGACACAGTCCCTCATCCAACTCTTCTGGAAGTTTTAACAACATCCCATGACCTCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504981.5
CDS GCA 90 bp TACCAGCAGAGATACGGTATAGATGGCATCTGCATGGTCATTGCTTaGAATGCACTTATAGTTGTCAGAGTCATCCGAAGTCAGTGGCTC +
Preference number: 5 (lower is better)
Translates to: YQQRYGIDGICMVIA*NALIVVRVIRSQWL
Trigger: GAGCCACTGACTTCGGATGACTCTGACAACTATAAGTGCATTGCAAGCAATGACCATGCAGATGCCATCTATACCGTATCTCTGCTGGTA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS-3UTR CAA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACATCTTGGCGGACTCCTaGATGGGGATGCCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHILADS*MGMPLS
Trigger: GGAGAGCGGCATCCCCATCAAGGAGTCCGCCAAGAT...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTTCAACCTTGGTCTCTTaGTCTTCCAGGGGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: PIPSLNVYINKHQRANWASTLVS*SSRGFR
Trigger: TCTGAAGCCCCTGGAAGACAAAGAGACCAAGGTTGA...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGACTGTGGTGTCAACCTaGGTCTCTTTGTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: CPIPSLNVYINKHQRANWTVVST*VSLSSR
Trigger: CCTGGAAGACAAAGAGACCAAGGTTGACACCACAGT...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTAGGTTGCTCACAAACTaGATGGGGATGCGGTCAACA +
Preference number: 5 (lower is better)
Translates to: PIPSLNVYINKHQRANWARLLTN*MGMRST
Trigger: TGTTGACCGCATCCCCATCAAGTTTGTGAGCAACCT...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGGGATCTTTGTGCACTaGGACCACTCCTTTGTGTCT +
Preference number: 5 (lower is better)
Translates to: PIPSLNVYINKHQRANWAGIFVH*DHSFVS
Trigger: AGACACAAAGGAGTGGTCCAAGTGCACAAAGATCCC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGAGTGGTTTTTGCTCTaGGTAATTGTCTCTCGGCCC +
Preference number: 5 (lower is better)
Translates to: PIPSLNVYINKHQRANWAEWFLL*VIVSRP
Trigger: GGGCCGAGAGACAATTACCAAGAGCAAAAACCACTC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGAGTTGTACCAGAACTaGGAGTTGGCCGTGATGTTG +
Preference number: 5 (lower is better)
Translates to: CPIPSLNVYINKHQRANWELYQN*ELAVML
Trigger: CAACATCACGGCCAACTCCAAGTTCTGGTACAACTC...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTGAGTTGTACCAGAACTaGGAGTTGGCCGTGATGTTG +
Preference number: 5 (lower is better)
Translates to: PIPSLNVYINKHQRANWAELYQN*ELAVML
Trigger: CAACATCACGGCCAACTCCAAGTTCTGGTACAACTC...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGTTTCCCTCTTCCACCTaGTTGGTGGAGAAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: CPIPSLNVYINKHQRANWFPSST*LVEKLV
Trigger: CACCAACTTCTCCACCAACAAGGTGGAAGAGGGAAA...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR CAA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTCTCACACCTTCTGAATaGACTGCCAGGATACGGAAC +
Preference number: 5 (lower is better)
Translates to: PIPSLNVYINKHQRANWALTPSE*TARIRN
Trigger: GTTCCGTATCCTGGCAGTCAATTCAGAAGGTGTGAG...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS GCA 90 bp CTGTTACCAGCAGAGATACGGTATAGATGGCATCTGCATGGTCATTaGTTGCAATGCACTTATAGTTGTCAGAGTCATCCGAAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: LLPAEIRYRWHLHGH*LQCTYSCQSHPKSV
Trigger: CACTGACTTCGGATGACTCTGACAACTATAAGTGCATTGCAAGCAATGACCATGCAGATGCCATCTATACCGTATCTCTGCTGGTAACAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS-3UTR CAA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGATAACCAGCATGTACTaGGTGCCCATCTGCTTCACA +
Preference number: 5 (lower is better)
Translates to: CPIPSLNVYINKHQRANWITSMY*VPICFT
Trigger: TGTGAAGCAGATGGGCACCAAGTACATGCTGGTTAT...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp TTCTTCTGCAGACTCTCGGTGATGGATGCTACAACTGACTTATCATCTTTGTCAAAGTTGGGCTCTTTCTaGGAGAGGCGGATCTCAAAC +
Preference number: 5 (lower is better)
Translates to: FFCRLSVMDATTDLSSLSKLGSF*ERRISN
Trigger: GTTTGAGATCCGCCTCTCCAAGAAAGAGCCCAACTT...TGACAAAGATGATAAGTCAGTTGTAGCATCCATCACCGAGAGTCTGCAGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS-3UTR CAA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGATCACTTTCCGTGCCCTaGGCCCGGAATGTGTACTTG +
Preference number: 5 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRSLSVP*ARNVYL
Trigger: CAAGTACACATTCCGGGCCAAGGGCACGGAAAGTGA...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCATTGTACCATGTCACTTaGGGCAGTGGTTTTCCCCGG +
Preference number: 5 (lower is better)
Translates to: VYCPIPSLNVYINKHQRALYHVT*GSGFPR
Trigger: CCGGGGAAAACCACTGCCCAAAGTGACATGGTACAA...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAACTGGCACCCACAGGTaGCTGCCTTTCTTCCTTCGT +
Preference number: 5 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRTGTHR*LPFFLR
Trigger: ACGAAGGAAGAAAGGCAGCAACCTGTGGGTGCCAGT...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCACTGAGATGGGGATCTTaGTGCACTTGGACCACTCCT +
Preference number: 5 (lower is better)
Translates to: VYCPIPSLNVYINKHQRALRWGS*CTWTTP
Trigger: AGGAGTGGTCCAAGTGCACAAAGATCCCCATCTCAG...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS GCA 90 bp CTCTTGACCTTCTGTTACCAGCAGAGATACGGTATAGATGGCATCTaGATGGTCATTGCTTGCAATGCACTTATAGTTGTCAGAGTCATC +
Preference number: 5 (lower is better)
Translates to: LLTFCYQQRYGIDGI*MVIACNALIVVRVI
Trigger: GATGACTCTGACAACTATAAGTGCATTGCAAGCAATGACCATGCAGATGCCATCTATACCGTATCTCTGCTGGTAACAGAAGGTCAAGAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS-3UTR CAA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACTCCTCTCCCACGATCTaGGTTGTCTGGGAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHSSPTI*VVWEKV
Trigger: GACCTTCTCCCAGACAACCAAGATCGTGGGAGAGGA...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACGAGCCGTGGTCATTCTaGAGCTTGAGCAGGATGAGG +
Preference number: 5 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHEPWSF*SLSRMR
Trigger: CCTCATCCTGCTCAAGCTCAAGAATGACCACGGCTC...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAACTTGGACCACTCCTTaGTGTCTTCAGCCCTCATCT +
Preference number: 5 (lower is better)
Translates to: VYCPIPSLNVYINKHQRATWTTP*CLQPSS
Trigger: AGATGAGGGCTGAAGACACAAAGGAGTGGTCCAAGT...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGACTGAGATGGGGATCTTaGTGCACTTGGACCACTCCT +
Preference number: 5 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRLRWGS*CTWTTP
Trigger: AGGAGTGGTCCAAGTGCACAAAGATCCCCATCTCAG...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCACCTGAGTCAGAGCGCTaGGTGCTATTAATGAGGAAC +
Preference number: 5 (lower is better)
Translates to: VYCPIPSLNVYINKHQRAPESER*VLLMRN
Trigger: GTTCCTCATTAATAGCACCAAGCGCTCTGACTCAGG...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACGAGAAGTTGGTGACTTaGCCGTCCACCTCGCCTATC +
Preference number: 5 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHEKLVT*PSTSPI
Trigger: GATAGGCGAGGTGGACGGCAAAGTCACCAACTTCTC...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS-3UTR CAA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGATTGTTGGTGGAGAAGTaGGTGACTTTGCCGTCCACC +
Preference number: 5 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRLLVEK*VTLPST
Trigger: GGTGGACGGCAAAGTCACCAACTTCTCCACCAACAA...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513874.6
CDS CCA 90 bp CCATTTTCTCTTGACCTTCTGTTACCAGCAGAGATACGGTATAGATaGCATCTGCATGGTCATTGCTTGCAATGCACTTATAGTTGTCAG +
Preference number: 5 (lower is better)
Translates to: PFSLDLLLPAEIRYR*HLHGHCLQCTYSCQ
Trigger: CTGACAACTATAAGTGCATTGCAAGCAATGACCATGCAGATGCCATCTATACCGTATCTCTGCTGGTAACAGAAGGTCAAGAGAAAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS-3UTR CAA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTTCGTTCATGTTCACGTaGCTAATAACCAGCATGTAC +
Preference number: 5 (lower is better)
Translates to: PIPSLNVYINKHQRANWASFMFT*LITSMY
Trigger: GTACATGCTGGTTATTAGCAACGTGAACATGAACGA...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACAAGTCCGTGATCTCCTaGCCATCCTTCAGCCACACA +
Preference number: 5 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHKSVIS*PSFSHT
Trigger: TGTGTGGCTGAAGGATGGCAAGGAGATCACGGACTT...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp CCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGGCTTTCTCAAAGTCTTTCTaGGGCACTTTGGACAAAATC +
Preference number: 5 (lower is better)
Translates to: PIPSLNVYINKHQRANWAFSKSF*GTLDKI
Trigger: GATTTTGTCCAAAGTGCCCAAGAAAGACTTTGAGAA...AGCCCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGTTGATCCATATCATCTaGACATTGGGGTCTTTCAGT +
Preference number: 5 (lower is better)
Translates to: CPIPSLNVYINKHQRANWLIHII*TLGSFS
Trigger: ACTGAAAGACCCCAATGTCAAGATGATATGGATCAA...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAGTGGCTCAGTACCCTaGATCCATATCATCTTGACA +
Preference number: 5 (lower is better)
Translates to: VYCPIPSLNVYINKHQRASGSVP*IHIILT
Trigger: TGTCAAGATGATATGGATCAAGGGTACTGAGCCACT...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACAAGTTGGGCTCTTTCTaGGAGAGGCGGATCTCAAAC +
Preference number: 5 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHKLGSF*ERRISN
Trigger: GTTTGAGATCCGCCTCTCCAAGAAAGAGCCCAACTT...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCATTCAGCTCCTTCCCATaGAACTTCCACACAAAGTTG +
Preference number: 5 (lower is better)
Translates to: VYCPIPSLNVYINKHQRAFSSFP*NFHTKL
Trigger: CAACTTTGTGTGGAAGTTCAATGGGAAGGAGCTGAA...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAACCGTGATTTCATACTaGTCATCCCTCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRTVISY*SSLFSS
Trigger: GGAGCTGAAGAGGGATGACAAGTATGAAATCACGGT...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACAGGTTGCTCACAAACTaGATGGGGATGCGGTCAACA +
Preference number: 5 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHRLLTN*MGMRST
Trigger: TGTTGACCGCATCCCCATCAAGTTTGTGAGCAACCT...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp GTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCACGTACATTTTTGAGGTaGCTCACAAACTTGATGGGG +
Preference number: 5 (lower is better)
Translates to: VYCPIPSLNVYINKHQRARTFLR*LTNLMG
Trigger: CCCCATCAAGTTTGTGAGCAACCTCAAAAATGTACG...TGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp TGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGCAAACTGGTTCACACGTACATTTTaGAGGTTGCTCACAAACTTG +
Preference number: 5 (lower is better)
Translates to: CPIPSLNVYINKHQRANWFTRTF*RLLTNL
Trigger: CAAGTTTGTGAGCAACCTCAAAAATGTACGTGTGAA...CCAGTTTGCTCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACAGGGAAATGCTGGAGTaGGAGGAATCAGATACATGC +
Preference number: 5 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHREMLE*EESDTC
Trigger: GCATGTATCTGATTCCTCCAACTCCAGCATTTCCCT...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGAGATGAGTTACGTTTATaGCCCCATCCCTTCACTGAA +
Preference number: 5 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRDELRL*PHPFTE
Trigger: TTCAGTGAAGGGATGGGGCAATAAACGTAACTCATC...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACGAAGTCCATTTTCTCTaGACCTTCTGTTACCAGCAG +
Preference number: 5 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHEVHFL*TFCYQQ
Trigger: CTGCTGGTAACAGAAGGTCAAGAGAAAATGGACTTC...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACTCTTTCTTGGGCACTTaGGACAAAATCTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHSFLGT*DKISSI
Trigger: GATGCTGGAGATTTTGTCCAAAGTGCCCAAGAAAGA...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp ATGAGTTACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCTGCATGGTCATTGCTaGCAATGCACTTATAGTTGT +
Preference number: 5 (lower is better)
Translates to: MSYVYCPIPSLNVYINKHLHGHC*QCTYSC
Trigger: ACAACTATAAGTGCATTGCAAGCAATGACCATGCAG...GTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTAACTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS-3UTR CAA 90 bp TACGTTTATTGCCCCATCCCTTCACTGAATGTTTACATTAACAAACACCAGAGACATATCATCTTGACATaGGGGTCTTTCAGTTCCATT +
Preference number: 5 (lower is better)
Translates to: YVYCPIPSLNVYINKHQRHIILT*GSFSSI
Trigger: AATGGAACTGAAAGACCCCAATGTCAAGATGATATG...TCTCTGGTGTTTGTTAATGTAAACATTCAGTGAAGGGATGGGGCAATAAACGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS CAA 90 bp CCGGTGAGCCACAGGCAGCAACACACCCTCGGGCGCGGTGACCGGTaGAGGCTTCTCCACGAACTCAGGGACGCTGTCGCCCGCAGGGAT +
Preference number: 6 (lower is better)
Translates to: PVSHRQQHTLGRGDR*RLLHELRDAVARRD
Trigger: ATCCCTGCGGGCGACAGCGTCCCTGAGTTCGTGGAGAAGCCTCAACCGGTCACCGCGCCCGAGGGTGTGTTGCTGCCTGTGGCTCACCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412229.2
CDS TCA 72 bp AACACGGCTTTGTCCCCCTCGGGCGCGGTGACCGGTTaGGGCTTCTCCACGAACTCAGGGACGCTGTCGCCC +
Preference number: 6 (lower is better)
Translates to: NTALSPSGAVTG*GFSTNSGTLSP
Trigger: GGGCGACAGCGTCCCTGAGTTCGTGGAGAAGCCTCAACCGGTCACCGCGCCCGAGGGGGACAAAGCCGTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS TCA 72 bp ACAGGCAGCAACACACCCTCGGGCGCGGTGACCGGTTaGGGCTTCTCCACGAACTCAGGGACGCTGTCGCCC +
Preference number: 6 (lower is better)
Translates to: TGSNTPSGAVTG*GFSTNSGTLSP
Trigger: GGGCGACAGCGTCCCTGAGTTCGTGGAGAAGCCTCAACCGGTCACCGCGCCCGAGGGTGTGTTGCTGCCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412229.2
CDS TCA 72 bp GGTGAGCCACAGGCAGCAACACACCCTCGGGCGCGGTaGCCGGTTGAGGCTTCTCCACGAACTCAGGGACGC +
Preference number: 6 (lower is better)
Translates to: GEPQAATHPRAR*PVEASPRTQGR
Trigger: GCGTCCCTGAGTTCGTGGAGAAGCCTCAACCGGTCACCGCGCCCGAGGGTGTGTTGCTGCCTGTGGCTCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412229.2
CDS CAA 72 bp GAACACGGCTTTGTCCCCCTCGGGCGCGGTGACCGGTaGAGGCTTCTCCACGAACTCAGGGACGCTGTCGCC +
Preference number: 6 (lower is better)
Translates to: EHGFVPLGRGDR*RLLHELRDAVA
Trigger: GGCGACAGCGTCCCTGAGTTCGTGGAGAAGCCTCAACCGGTCACCGCGCCCGAGGGGGACAAAGCCGTGTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp GGGATGCCGCTCTCCCTCTTCCAGGAGATGTGGGGTTaGGCGTTCCCCTGCACCCGGGCTCGGAACACGGCT +
Preference number: 6 (lower is better)
Translates to: GMPLSLFQEMWG*AFPCTRARNTA
Trigger: AGCCGTGTTCCGAGCCCGGGTGCAGGGGAACGCCAAACCCCACATCTCCTGGAAGAGGGAGAGCGGCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp CACAGGCAGCAACACACCCTCGGGCGCGGTGACCGGTaGAGGCTTCTCCACGAACTCAGGGACGCTGTCGCC +
Preference number: 6 (lower is better)
Translates to: HRQQHTLGRGDR*RLLHELRDAVA
Trigger: GGCGACAGCGTCCCTGAGTTCGTGGAGAAGCCTCAACCGGTCACCGCGCCCGAGGGTGTGTTGCTGCCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412229.2
CDS TCA 72 bp GGGCACTCGATTAGAAAGCGAAGCACTGGAGCCCGGTaGGCCACAGGCAGCAACACACCCTCGGGCGCGGTG +
Preference number: 6 (lower is better)
Translates to: GHSIRKRSTGAR*ATGSNTPSGAV
Trigger: CACCGCGCCCGAGGGTGTGTTGCTGCCTGTGGCTCACCGGGCTCCAGTGCTTCGCTTTCTAATCGAGTGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412229.2
CDS CCA 72 bp GGATGCCGCTCTCCCTCTTCCAGGAGATGTGGGGTTTaGCGTTCCCCTGCACCCGGGCTCGGAACACGGCTT +
Preference number: 6 (lower is better)
Translates to: GCRSPSSRRCGV*RSPAPGLGTRL
Trigger: AAGCCGTGTTCCGAGCCCGGGTGCAGGGGAACGCCAAACCCCACATCTCCTGGAAGAGGGAGAGCGGCATCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CCA 72 bp TTGATGGGGATGCCGCTCTCCCTCTTCCAGGAGATGTaGGGTTTGGCGTTCCCCTGCACCCGGGCTCGGAAC +
Preference number: 6 (lower is better)
Translates to: LMGMPLSLFQEM*GLAFPCTRARN
Trigger: GTTCCGAGCCCGGGTGCAGGGGAACGCCAAACCCCACATCTCCTGGAAGAGGGAGAGCGGCATCCCCATCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CCA 72 bp GAGCTCCAGGAACTCCACCCGGCCCTGTGGAGGCTTTaGACGGTCCAGCACACTAAGGTGCAGAGTGGCCGT +
Preference number: 6 (lower is better)
Translates to: ELQELHPALWRL*TVQHTKVQSGR
Trigger: ACGGCCACTCTGCACCTTAGTGTGCTGGACCGTCCAAAGCCTCCACAGGGCCGGGTGGAGTTCCTGGAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS TCA 72 bp CAGGCCTGGGGGTTTAACAGGATCCTTGGCCACTACTaGGCTGGATGGCACACTGGGCTGTCCAGGGCCTGC +
Preference number: 6 (lower is better)
Translates to: QAWGFNRILGHY*AGWHTGLSRAC
Trigger: GCAGGCCCTGGACAGCCCAGTGTGCCATCCAGCTCAGTAGTGGCCAAGGATCCTGTTAAACCCCCAGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp ACTACACACAACTCAGCTGGGCTCCCAGTGGCCGCGTaGACGTCGGACATCCCGCTCTTCACTGTGGCCAGA +
Preference number: 6 (lower is better)
Translates to: TTHNSAGLPVAA*TSDIPLFTVAR
Trigger: TCTGGCCACAGTGAAGAGCGGGATGTCCGACGTGCACGCGGCCACTGGGAGCCCAGCTGAGTTGTGTGTAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp ATGTGGGCCGTGTGGCCTACCTTCACAGTGATGGCGTaGGCAGCCAGTGCCTCCAGTACTGACGGGTCGATG +
Preference number: 6 (lower is better)
Translates to: MWAVWPTFTVMA*AASASSTDGSM
Trigger: CATCGACCCGTCAGTACTGGAGGCACTGGCTGCGCACGCCATCACTGTGAAGGTAGGCCACACGGCCCACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp CGTCAGGTGGTGGTGAGCCAGAGAAGGCTGCATGGATaGAGAGGGCTGTCCCAGCGCGAACCACCATGTGAC +
Preference number: 6 (lower is better)
Translates to: RQVVVSQRRLHG*RGLSQREPPCD
Trigger: GTCACATGGTGGTTCGCGCTGGGACAGCCCTCTGCATCCATGCAGCCTTCTCTGGCTCACCACCACCTGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS TCA 72 bp CAGCGCGAACCACCATGTGACTCTTCAGCCGGGCACTaGGGTCAAACTTGGGTGCAGCTGGTGGTGGCATGG +
Preference number: 6 (lower is better)
Translates to: QREPPCDSSAGH*GQTWVQLVVAW
Trigger: CCATGCCACCACCAGCTGCACCCAAGTTTGACCTCAGTGCCCGGCTGAAGAGTCACATGGTGGTTCGCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp CCCTGTGGAGGCTTTGGACGGTCCAGCACACTAAGGTaGAGAGTGGCCGTGGCTGAGCCGTGGTCATTCTTG +
Preference number: 6 (lower is better)
Translates to: PCGGFGRSSTLR*RVAVAEPWSFL
Trigger: CAAGAATGACCACGGCTCAGCCACGGCCACTCTGCACCTTAGTGTGCTGGACCGTCCAAAGCCTCCACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS CCA 72 bp AGGTCTGCACGTGGGTGGTGGAGCTGGAGAACTCCATaGACACGTGCTCCTGCAGCATCTGCCGGCTGTGAA +
Preference number: 6 (lower is better)
Translates to: RSARGWWSWRTP*TRAPAASAGCE
Trigger: TTCACAGCCGGCAGATGCTGCAGGAGCACGTGTCCATGGAGTTCTCCAGCTCCACCACCCACGTGCAGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319338.6
ENST00000412229.2
ENST00000504981.5
ENST00000513874.6
CDS CCA 72 bp TCTTCACGCACACAGTTGGAGATGGTGAGCAGTGCCTaGTCTTCCCCGCGCTCCATGGACACGCGTTCCTCC +
Preference number: 6 (lower is better)
Translates to: SSRTQLEMVSSA*SSPRSMDTRSS
Trigger: GGAGGAACGCGTGTCCATGGAGCGCGGGGAAGACCAGGCACTGCTCACCATCTCCAACTGTGTGCGTGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CCA 72 bp CTGCAGGCTCCCGCCAGGCCAGGGAAATGCTGGAGTTaGAGGAATCAGATACATGCAGGTCCTGGACCAGGC +
Preference number: 6 (lower is better)
Translates to: LQAPARPGKCWS*RNQIHAGPGPG
Trigger: GCCTGGTCCAGGACCTGCATGTATCTGATTCCTCCAACTCCAGCATTTCCCTGGCCTGGCGGGAGCCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp AGGTGCAGAGTGGCCGTGGCTGAGCCGTGGTCATTCTaGAGCTTGAGCAGGATGAGGCCGCTGTCTTCACGC +
Preference number: 6 (lower is better)
Translates to: RCRVAVAEPWSF*SLSRMRPLSSR
Trigger: GCGTGAAGACAGCGGCCTCATCCTGCTCAAGCTCAAGAATGACCACGGCTCAGCCACGGCCACTCTGCACCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS TCA 72 bp CTTTGGGGCCTTCCACTTCATGTGCACACAACTACCTaGGAGCTCCAGGAACTCCACCCGGCCCTGTGGAGG +
Preference number: 6 (lower is better)
Translates to: LWGLPLHVHTTT*ELQELHPALWR
Trigger: CCTCCACAGGGCCGGGTGGAGTTCCTGGAGCTCTCAGGTAGTTGTGTGCACATGAAGTGGAAGGCCCCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS TCA 72 bp TGGATGCAGAGGGCTGTCCCAGCGCGAACCACCATGTaGCTCTTCAGCCGGGCACTGAGGTCAAACTTGGGT +
Preference number: 6 (lower is better)
Translates to: WMQRAVPARTTM*LFSRALRSNLG
Trigger: ACCCAAGTTTGACCTCAGTGCCCGGCTGAAGAGTCACATGGTGGTTCGCGCTGGGACAGCCCTCTGCATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp TCCGTGCCCTTGGCCCGGAATGTGTACTTGCCCTCGTaGTCAGGGCCCATACTGGGAAAGATGAGCTTGTGC +
Preference number: 6 (lower is better)
Translates to: SVPLARNVYLPS*SGPILGKMSLC
Trigger: GCACAAGCTCATCTTTCCCAGTATGGGCCCTGAGCACGAGGGCAAGTACACATTCCGGGCCAAGGGCACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp ATTGTCTCTCGGCCCTTGGTGGGAACGCCATCTTTCTaGCAGATCACGTCAGGTGGTGGTGAGCCCTGGTGG +
Preference number: 6 (lower is better)
Translates to: IVSRPLVGTPSF*QITSGGGEPWW
Trigger: CCACCAGGGCTCACCACCACCTGACGTGATCTGGCAGAAAGATGGCGTTCCCACCAAGGGCCGAGAGACAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS CCA 72 bp GCTGCCCATCCTTCTTCCAGCGCAGTGTCACATCCTTaGATGTCAGCTCACACTCCAGGCATGCGCGACTCC +
Preference number: 6 (lower is better)
Translates to: AAHPSSSAVSHP*MSAHTPGMRDS
Trigger: GGAGTCGCGCATGCCTGGAGTGTGAGCTGACATCCAAGGATGTGACACTGCGCTGGAAGAAGGATGGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CCA 72 bp AGCACACTAAGGTGCAGAGTGGCCGTGGCTGAGCCGTaGTCATTCTTGAGCTTGAGCAGGATGAGGCCGCTG +
Preference number: 6 (lower is better)
Translates to: STLRCRVAVAEP*SFLSLSRMRPL
Trigger: CAGCGGCCTCATCCTGCTCAAGCTCAAGAATGACCACGGCTCAGCCACGGCCACTCTGCACCTTAGTGTGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CCA 72 bp ATGGGTCCACTCAGCAAGACCTCCTTTGGTCACTCCTaGGCCTCTGTTCCAAGGACCTCACCCTGGATGGGG +
Preference number: 6 (lower is better)
Translates to: MGPLSKTSFGHS*ASVPRTSPWMG
Trigger: CCCCATCCAGGGTGAGGTCCTTGGAACAGAGGCCCAGGAGTGACCAAAGGAGGTCTTGCTGAGTGGACCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504981.5
CDS CAA 72 bp CTTGATGGGGATGCGGTCAACAGTGAGCTGGGCCTTTaGTACCAGGTTCCCCGCCTCAGCAGAGAACTCGCC +
Preference number: 6 (lower is better)
Translates to: LDGDAVNSELGL*YQVPRLSRELA
Trigger: GGCGAGTTCTCTGCTGAGGCGGGGAACCTGGTACAAAAGGCCCAGCTCACTGTTGACCGCATCCCCATCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp AGAGTGGCCGTGGCTGAGCCGTGGTCATTCTTGAGCTaGAGCAGGATGAGGCCGCTGTCTTCACGCACACAG +
Preference number: 6 (lower is better)
Translates to: RVAVAEPWSFLS*SRMRPLSSRTQ
Trigger: CTGTGTGCGTGAAGACAGCGGCCTCATCCTGCTCAAGCTCAAGAATGACCACGGCTCAGCCACGGCCACTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp TCTGCAGGCTCCCGCCAGGCCAGGGAAATGCTGGAGTaGGAGGAATCAGATACATGCAGGTCCTGGACCAGG +
Preference number: 6 (lower is better)
Translates to: SAGSRQAREMLE*EESDTCRSWTR
Trigger: CCTGGTCCAGGACCTGCATGTATCTGATTCCTCCAACTCCAGCATTTCCCTGGCCTGGCGGGAGCCTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 90 bp TTCTTGAGCTTGAGCAGGATGAGGCCGCTGTCTTCACGCACACAGTaGGAGATGGTGAGCAGTGCCTGGTCTTCCCCGCGCTCCATGGAC +
Preference number: 6 (lower is better)
Translates to: FLSLSRMRPLSSRTQ*EMVSSAWSSPRSMD
Trigger: GTCCATGGAGCGCGGGGAAGACCAGGCACTGCTCACCATCTCCAACTGTGTGCGTGAAGACAGCGGCCTCATCCTGCTCAAGCTCAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 90 bp GCTCACAAACTTGATGGGGATGCGGTCAACAGTGAGCTGGGCCTTTaGTACCAGGTTCCCCGCCTCAGCAGAGAACTCGCCGCTGTCACT +
Preference number: 6 (lower is better)
Translates to: AHKLDGDAVNSELGL*YQVPRLSRELAAVT
Trigger: AGTGACAGCGGCGAGTTCTCTGCTGAGGCGGGGAACCTGGTACAAAAGGCCCAGCTCACTGTTGACCGCATCCCCATCAAGTTTGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 90 bp CTAAGGTGCAGAGTGGCCGTGGCTGAGCCGTGGTCATTCTTGAGCTaGAGCAGGATGAGGCCGCTGTCTTCACGCACACAGTTGGAGATG +
Preference number: 6 (lower is better)
Translates to: LRCRVAVAEPWSFLS*SRMRPLSSRTQLEM
Trigger: CATCTCCAACTGTGTGCGTGAAGACAGCGGCCTCATCCTGCTCAAGCTCAAGAATGACCACGGCTCAGCCACGGCCACTCTGCACCTTAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 90 bp AGCACACTAAGGTGCAGAGTGGCCGTGGCTGAGCCGTGGTCATTCTaGAGCTTGAGCAGGATGAGGCCGCTGTCTTCACGCACACAGTTG +
Preference number: 6 (lower is better)
Translates to: STLRCRVAVAEPWSF*SLSRMRPLSSRTQL
Trigger: CAACTGTGTGCGTGAAGACAGCGGCCTCATCCTGCTCAAGCTCAAGAATGACCACGGCTCAGCCACGGCCACTCTGCACCTTAGTGTGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 90 bp CACTCCTGGGCCTCTGTTCCAAGGACCTCACCCTGGATGGGGTCCTaGTTGACTGGCACCCACAGGTTGCTGCCTTTCTTCCTTCGTTCT +
Preference number: 6 (lower is better)
Translates to: HSWASVPRTSPWMGS*LTGTHRLLPFFLRS
Trigger: AGAACGAAGGAAGAAAGGCAGCAACCTGTGGGTGCCAGTCAACAAGGACCCCATCCAGGGTGAGGTCCTTGGAACAGAGGCCCAGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504981.5
CDS TCA 72 bp CACAGTGATGGCGTGCGCAGCCAGTGCCTCCAGTACTaGCGGGTCGATGGTAGGAGGATCTGCGATGAATAC +
Preference number: 6 (lower is better)
Translates to: HSDGVRSQCLQY*RVDGRRICDEY
Trigger: GTATTCATCGCAGATCCTCCTACCATCGACCCGTCAGTACTGGAGGCACTGGCTGCGCACGCCATCACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS TCA 72 bp AGGCTCCAGCACACTAAGGTGCAGAGTGGCCGTGGCTaGGCCGTGGTCATTCTTGAGCTTGAGCAGGATGAG +
Preference number: 6 (lower is better)
Translates to: RLQHTKVQSGRG*AVVILELEQDE
Trigger: CTCATCCTGCTCAAGCTCAAGAATGACCACGGCTCAGCCACGGCCACTCTGCACCTTAGTGTGCTGGAGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS TCA 72 bp CCACAGTGCACTTGGTGCCCTGGATGGGGTCCTTGTTaGCTGGCACCCACAGGTTGCTGCCTTTCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: PQCTWCPGWGPC*LAPTGCCLSSF
Trigger: GAAGGAAGAAAGGCAGCAACCTGTGGGTGCCAGTCAACAAGGACCCCATCCAGGGCACCAAGTGCACTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS TCA 72 bp ACGGTCCAGCACACTAAGGTGCAGAGTGGCCGTGGCTaGGCCGTGGTCATTCTTGAGCTTGAGCAGGATGAG +
Preference number: 6 (lower is better)
Translates to: TVQHTKVQSGRG*AVVILELEQDE
Trigger: CTCATCCTGCTCAAGCTCAAGAATGACCACGGCTCAGCCACGGCCACTCTGCACCTTAGTGTGCTGGACCGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp GCCTGGACTGTAGGGTGGCCCGTCTCCTTCTTCCTTTaGCCCAACAGTGAGGCTACCAGTGTCATCTGTTCC +
Preference number: 6 (lower is better)
Translates to: AWTVGWPVSFFL*PNSEATSVICS
Trigger: GGAACAGATGACACTGGTAGCCTCACTGTTGGGGCAAAGGAAGAAGGAGACGGGCCACCCTACAGTCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS GCA 72 bp TCCTCTCCCACGATCTTGGTTGTCTGGGAGAAGGTCTaGACGTGGGTGGTGGAGCTGGAGAACTCCATGGAC +
Preference number: 6 (lower is better)
Translates to: SSPTILVVWEKV*TWVVELENSMD
Trigger: GTCCATGGAGTTCTCCAGCTCCACCACCCACGTGCAGACCTTCTCCCAGACAACCAAGATCGTGGGAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319338.6
ENST00000412229.2
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp GGCCACCACAGTGTACTCGCCACCATCACTGAGCTGTaGATCCTCAATGATCAGCTCTGCTCGCTTGCCCTC +
Preference number: 6 (lower is better)
Translates to: GHHSVLATITEL*ILNDQLCSLAL
Trigger: GAGGGCAAGCGAGCAGAGCTGATCATTGAGGATGCACAGCTCAGTGATGGTGGCGAGTACACTGTGGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CCA 72 bp TTGTCTGGGAGAAGGTCTGCACGTGGGTGGTGGAGCTaGAGAACTCCATGGACACGTGCTCCTGCAGCATCT +
Preference number: 6 (lower is better)
Translates to: LSGRRSARGWWS*RTPWTRAPAAS
Trigger: AGATGCTGCAGGAGCACGTGTCCATGGAGTTCTCCAGCTCCACCACCCACGTGCAGACCTTCTCCCAGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319338.6
ENST00000412229.2
ENST00000504981.5
ENST00000513874.6
CDS CCA 72 bp CGATCTTGGTTGTCTGGGAGAAGGTCTGCACGTGGGTaGTGGAGCTGGAGAACTCCATGGACACGTGCTCCT +
Preference number: 6 (lower is better)
Translates to: RSWLSGRRSARG*WSWRTPWTRAP
Trigger: AGGAGCACGTGTCCATGGAGTTCTCCAGCTCCACCACCCACGTGCAGACCTTCTCCCAGACAACCAAGATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319338.6
ENST00000412229.2
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp GCTTCACTTTCCGTGCCCTTGGCCCGGAATGTGTACTaGCCCTCGTGCTCAGGGCCCATACTGGGAAAGATG +
Preference number: 6 (lower is better)
Translates to: ASLSVPLARNVY*PSCSGPILGKM
Trigger: CATCTTTCCCAGTATGGGCCCTGAGCACGAGGGCAAGTACACATTCCGGGCCAAGGGCACGGAAAGTGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp CCATCCACAGTGCACTTGGTGCCCTGGATGGGGTCCTaGTTGACTGGCACCCACAGGTTGCTGCCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: PSTVHLVPWMGS*LTGTHRLLPFF
Trigger: GAAGAAAGGCAGCAACCTGTGGGTGCCAGTCAACAAGGACCCCATCCAGGGCACCAAGTGCACTGTGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS CAA 72 bp GCCTCTGTTCCAAGGACCTCACCCTGGATGGGGTCCTaGTTGACTGGCACCCACAGGTTGCTGCCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: ASVPRTSPWMGS*LTGTHRLLPFF
Trigger: GAAGAAAGGCAGCAACCTGTGGGTGCCAGTCAACAAGGACCCCATCCAGGGTGAGGTCCTTGGAACAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504981.5
CDS CAA 90 bp GTGTACTTGCCCTCGTGCTCAGGGCCCATACTGGGAAAGATGAGCTaGTGCACTGCACCCTGCTTCACAATCTGCATGCCTGGCAAGTCC +
Preference number: 6 (lower is better)
Translates to: VYLPSCSGPILGKMS*CTAPCFTICMPGKS
Trigger: GGACTTGCCAGGCATGCAGATTGTGAAGCAGGGTGCAGTGCACAAGCTCATCTTTCCCAGTATGGGCCCTGAGCACGAGGGCAAGTACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 90 bp GTAGGAGGATCTGCGATGAATACAGAGGCTTCACTTTCCGTGCCCTaGGCCCGGAATGTGTACTTGCCCTCGTGCTCAGGGCCCATACTG +
Preference number: 6 (lower is better)
Translates to: VGGSAMNTEASLSVP*ARNVYLPSCSGPIL
Trigger: CAGTATGGGCCCTGAGCACGAGGGCAAGTACACATTCCGGGCCAAGGGCACGGAAAGTGAAGCCTCTGTATTCATCGCAGATCCTCCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS TCA 72 bp CGCCCGCAGGGATGTTTGAGCTCCGGGTCACTAAGCTaGAGAACTCCACTATGCTCGAGGACTTCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: RPQGCLSSGSLS*RTPLCSRTSSS
Trigger: TGAGGAGGAAGTCCTCGAGCATAGTGGAGTTCTTCAGCTTAGTGACCCGGAGCTCAAACATCCCTGCGGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319338.6
ENST00000412229.2
ENST00000504981.5
ENST00000513874.6
CDS TCA 72 bp CTGTTCCAAGGACCTCACCCTGGATGGGGTCCTTGTTaGCTGGCACCCACAGGTTGCTGCCTTTCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: LFQGPHPGWGPC*LAPTGCCLSSF
Trigger: GAAGGAAGAAAGGCAGCAACCTGTGGGTGCCAGTCAACAAGGACCCCATCCAGGGTGAGGTCCTTGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504981.5
CDS GCA 72 bp TCGTGCTCAGGGCCCATACTGGGAAAGATGAGCTTGTaGACTGCACCCTGCTTCACAATCTGCATGCCTGGC +
Preference number: 6 (lower is better)
Translates to: SCSGPILGKMSL*TAPCFTICMPG
Trigger: GCCAGGCATGCAGATTGTGAAGCAGGGTGCAGTGCACAAGCTCATCTTTCCCAGTATGGGCCCTGAGCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp ATTGTCTCTCGGCCCTTGGTGGGAACGCCATCTTTCTaGCAGATCACGTCAGGTGGTGGTGAGCCAGAGAAG +
Preference number: 6 (lower is better)
Translates to: IVSRPLVGTPSF*QITSGGGEPEK
Trigger: CTTCTCTGGCTCACCACCACCTGACGTGATCTGGCAGAAAGATGGCGTTCCCACCAAGGGCCGAGAGACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS CCA 72 bp AGTGCACTTGGTGCCCTGGATGGGGTCCTTGTTGACTaGCACCCACAGGTTGCTGCCTTTCTTCCTTCGTTC +
Preference number: 6 (lower is better)
Translates to: SALGALDGVLVD*HPQVAAFLPSF
Trigger: GAACGAAGGAAGAAAGGCAGCAACCTGTGGGTGCCAGTCAACAAGGACCCCATCCAGGGCACCAAGTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319338.6
ENST00000513874.6
CDS CCA 72 bp TCCAAGGACCTCACCCTGGATGGGGTCCTTGTTGACTaGCACCCACAGGTTGCTGCCTTTCTTCCTTCGTTC +
Preference number: 6 (lower is better)
Translates to: SKDLTLDGVLVD*HPQVAAFLPSF
Trigger: GAACGAAGGAAGAAAGGCAGCAACCTGTGGGTGCCAGTCAACAAGGACCCCATCCAGGGTGAGGTCCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504981.5
CDS CAA 72 bp CCCTCGTGCTCAGGGCCCATACTGGGAAAGATGAGCTaGTGCACTGCACCCTGCTTCACAATCTGCATGCCT +
Preference number: 6 (lower is better)
Translates to: PSCSGPILGKMS*CTAPCFTICMP
Trigger: AGGCATGCAGATTGTGAAGCAGGGTGCAGTGCACAAGCTCATCTTTCCCAGTATGGGCCCTGAGCACGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp TCTGCGATGAATACAGAGGCTTCACTTTCCGTGCCCTaGGCCCGGAATGTGTACTTGCCCTCGTGCTCAGGG +
Preference number: 6 (lower is better)
Translates to: SAMNTEASLSVP*ARNVYLPSCSG
Trigger: CCCTGAGCACGAGGGCAAGTACACATTCCGGGCCAAGGGCACGGAAAGTGAAGCCTCTGTATTCATCGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 90 bp AATACAGAGGCTTCACTTTCCGTGCCCTTGGCCCGGAATGTGTACTaGCCCTCGTGCTCAGGGCCCATACTGGGAAAGATGAGCTTGTGC +
Preference number: 6 (lower is better)
Translates to: NTEASLSVPLARNVY*PSCSGPILGKMSLC
Trigger: GCACAAGCTCATCTTTCCCAGTATGGGCCCTGAGCACGAGGGCAAGTACACATTCCGGGCCAAGGGCACGGAAAGTGAAGCCTCTGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS TCA 72 bp ACTTGCCCTCGTGCTCAGGGCCCATACTGGGAAAGATaGGCTTGTGCACTGCACCCTGCTTCACAATCTGCA +
Preference number: 6 (lower is better)
Translates to: TCPRAQGPYWER*ACALHPASQSA
Trigger: TGCAGATTGTGAAGCAGGGTGCAGTGCACAAGCTCATCTTTCCCAGTATGGGCCCTGAGCACGAGGGCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS TCA 72 bp CAGCCCGGATTCGGAAGAAGTATTTCTGCCTCTCGATaGGTCCTCCCACTGTGTAGCAGGTGCCTGAGATGG +
Preference number: 6 (lower is better)
Translates to: QPGFGRSISASR*VLPLCSRCLRW
Trigger: CCATCTCAGGCACCTGCTACACAGTGGGAGGACTCATCGAGAGGCAGAAATACTTCTTCCGAATCCGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp CTCAGGGCCCATACTGGGAAAGATGAGCTTGTGCACTaGACCCTGCTTCACAATCTGCATGCCTGGCAAGTC +
Preference number: 6 (lower is better)
Translates to: LRAHTGKDELVH*TLLHNLHAWQV
Trigger: GACTTGCCAGGCATGCAGATTGTGAAGCAGGGTGCAGTGCACAAGCTCATCTTTCCCAGTATGGGCCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp GCTCCATGGACACGCGTTCCTCCTCCGTCACTTCCATaGCATCCTTGTACCATGTCACTTTGGGCAGTGGTT +
Preference number: 6 (lower is better)
Translates to: APWTRVPPPSLP*HPCTMSLWAVV
Trigger: AACCACTGCCCAAAGTGACATGGTACAAGGATGGCATGGAAGTGACGGAGGAGGAACGCGTGTCCATGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CCA 72 bp CTTGTGCACTGCACCCTGCTTCACAATCTGCATGCCTaGCAAGTCCGTGATCTCCTTGCCATCCTTCAGCCA +
Preference number: 6 (lower is better)
Translates to: LVHCTLLHNLHA*QVRDLLAILQP
Trigger: TGGCTGAAGGATGGCAAGGAGATCACGGACTTGCCAGGCATGCAGATTGTGAAGCAGGGTGCAGTGCACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp GCATGTACTTGGTGCCCATCTGCTTCACATCGTACTTaGCCAGGGAGTACTGGATCCTCAGTGGCTCAGTAC +
Preference number: 6 (lower is better)
Translates to: ACTWCPSASHRT*PGSTGSSVAQY
Trigger: GTACTGAGCCACTGAGGATCCAGTACTCCCTGGGCAAGTACGATGTGAAGCAGATGGGCACCAAGTACATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp CCCATACTGGGAAAGATGAGCTTGTGCACTGCACCCTaGTTCACAATCTGCATGCCTGGCAAGTCCGTGATC +
Preference number: 6 (lower is better)
Translates to: PILGKMSLCTAP*FTICMPGKSVI
Trigger: GATCACGGACTTGCCAGGCATGCAGATTGTGAAGCAGGGTGCAGTGCACAAGCTCATCTTTCCCAGTATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp CCACTGTGTAGCAGGTGCCTGAGATGGGGATCTTTGTaGACTTGGACCACTCCTTTGTGTCTTCAGCCCTCA +
Preference number: 6 (lower is better)
Translates to: PLCSRCLRWGSL*TWTTPLCLQPS
Trigger: TGAGGGCTGAAGACACAAAGGAGTGGTCCAAGTGCACAAAGATCCCCATCTCAGGCACCTGCTACACAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CCA 72 bp TCAGTAGTTAATGGGTCCACTCAGCAAGACCTCCTTTaGTCACTCCTGGGCCTCTGTTCCAAGGACCTCACC +
Preference number: 6 (lower is better)
Translates to: SVVNGSTQQDLL*SLLGLCSKDLT
Trigger: GGTGAGGTCCTTGGAACAGAGGCCCAGGAGTGACCAAAGGAGGTCTTGCTGAGTGGACCCATTAACTACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504981.5
CDS CAA 72 bp CAGTCAAAGACCACTGTGGTGTCAACCTTGGTCTCTTaGTCTTCCAGGGGCTTCAGAATCCGGATGGCCTCC +
Preference number: 6 (lower is better)
Translates to: QSKTTVVSTLVS*SSRGFRIRMAS
Trigger: GGAGGCCATCCGGATTCTGAAGCCCCTGGAAGACAAAGAGACCAAGGTTGACACCACAGTGGTCTTTGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp CGTGATGGTCACGGCTTCTTTAGTCACATCAGTCACTaGAGGCTGGGAGGCAAAACCAGGAGGCTCTATGGG +
Preference number: 6 (lower is better)
Translates to: RDGHGFFSHISH*RLGGKTRRLYG
Trigger: CCCATAGAGCCTCCTGGTTTTGCCTCCCAGCCTCAAGTGACTGATGTGACTAAAGAAGCCGTGACCATCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS CAA 90 bp TCCAGGCATGCGCGACTCCTCTCTTTCACACGTACATTTTTGAGGTaGCTCACAAACTTGATGGGGATGCGGTCAACAGTGAGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: SRHARLLSFTRTFLR*LTNLMGMRSTVSWA
Trigger: GGCCCAGCTCACTGTTGACCGCATCCCCATCAAGTTTGTGAGCAACCTCAAAAATGTACGTGTGAAAGAGAGGAGTCGCGCATGCCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 90 bp CCACCATCACTGAGCTGTGCATCCTCAATGATCAGCTCTGCTCGCTaGCCCTCATGGTTCATGCTGTACTTAGTGCCATGCATCAGCAGC +
Preference number: 6 (lower is better)
Translates to: PPSLSCASSMISSAR*PSWFMLYLVPCISS
Trigger: GCTGCTGATGCATGGCACTAAGTACAGCATGAACCATGAGGGCAAGCGAGCAGAGCTGATCATTGAGGATGCACAGCTCAGTGATGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 90 bp ACTGCCCTCCGTTCCACTATGAACTGTGTCACAGGTCGTCCACCATaGTCCTTTGGGGCCTTCCACTTCATGTGCACACAACTACCTGAG +
Preference number: 6 (lower is better)
Translates to: TALRSTMNCVTGRPP*SFGAFHFMCTQLPE
Trigger: CTCAGGTAGTTGTGTGCACATGAAGTGGAAGGCCCCAAAGGACAATGGTGGACGACCTGTGACACAGTTCATAGTGGAACGGAGGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS CAA 90 bp GGCATTCCACGTGATGGTCACGGCTTCTTTAGTCACATCAGTCACTaGAGGCTGGGAGGCAAAACCAGGAGGCTCTATGGGATTTCCTGC +
Preference number: 6 (lower is better)
Translates to: GIPRDGHGFFSHISH*RLGGKTRRLYGISC
Trigger: GCAGGAAATCCCATAGAGCCTCCTGGTTTTGCCTCCCAGCCTCAAGTGACTGATGTGACTAAAGAAGCCGTGACCATCACGTGGAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS TCA 72 bp AGGGTGGCCCGTCTCCTTCTTCCTTTGCCCCAACAGTaGGGCTACCAGTGTCATCTGTTCCTTAAATGTCTG +
Preference number: 6 (lower is better)
Translates to: RVARLLLPLPQQ*GYQCHLFLKCL
Trigger: CAGACATTTAAGGAACAGATGACACTGGTAGCCTCACTGTTGGGGCAAAGGAAGAAGGAGACGGGCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319338.6
CDS TCA 72 bp TCCAGGACTTCTTGCCAACTGCCCTCCGTTCCACTATaGACTGTGTCACAGGTCGTCCACCATTGTCCTTTG +
Preference number: 6 (lower is better)
Translates to: SRTSCQLPSVPL*TVSQVVHHCPL
Trigger: CAAAGGACAATGGTGGACGACCTGTGACACAGTTCATAGTGGAACGGAGGGCAGTTGGCAAGAAGTCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS TCA 72 bp GTGATGGTCACGGCTTCTTTAGTCACATCAGTCACTTaGGGCTGGGAGGCAAAACCAGGAGGCTCTATGGGA +
Preference number: 6 (lower is better)
Translates to: VMVTASLVTSVT*GWEAKPGGSMG
Trigger: TCCCATAGAGCCTCCTGGTTTTGCCTCCCAGCCTCAAGTGACTGATGTGACTAAAGAAGCCGTGACCATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp TGGTTCATGCTGTACTTAGTGCCATGCATCAGCAGCTaGCCATCCTTCTTCCAGCGCAGTGTCACATCCTTG +
Preference number: 6 (lower is better)
Translates to: WFMLYLVPCISS*PSFFQRSVTSL
Trigger: CAAGGATGTGACACTGCGCTGGAAGAAGGATGGGCAGCTGCTGATGCATGGCACTAAGTACAGCATGAACCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp CACCTCGCCTATCTTAATCCAGGACTTCTTGCCAACTaGCCTCCGTTCCACTATGAACTGTGTCACAGGTCG +
Preference number: 6 (lower is better)
Translates to: HLAYLNPGLLAN*PPFHYELCHRS
Trigger: CGACCTGTGACACAGTTCATAGTGGAACGGAGGGCAGTTGGCAAGAAGTCCTGGATTAAGATAGGCGAGGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS CCA 72 bp GCATCCTCAATGATCAGCTCTGCTCGCTTGCCCTCATaGTTCATGCTGTACTTAGTGCCATGCATCAGCAGC +
Preference number: 6 (lower is better)
Translates to: ASSMISSARLPS*FMLYLVPCISS
Trigger: GCTGCTGATGCATGGCACTAAGTACAGCATGAACCATGAGGGCAAGCGAGCAGAGCTGATCATTGAGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp AGCATGTACTTGGTGCCCATCTGCTTCACATCGTACTaGCCCAGGGAGTACTGGATCCTCAGTGGCTCAGTA +
Preference number: 6 (lower is better)
Translates to: SMYLVPICFTSY*PREYWILSGSV
Trigger: TACTGAGCCACTGAGGATCCAGTACTCCCTGGGCAAGTACGATGTGAAGCAGATGGGCACCAAGTACATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp TTGCCGTCCACCTCGCCTATCTTAATCCAGGACTTCTaGCCAACTGCCCTCCGTTCCACTATGAACTGTGTC +
Preference number: 6 (lower is better)
Translates to: LPSTSPILIQDF*PTALRSTMNCV
Trigger: GACACAGTTCATAGTGGAACGGAGGGCAGTTGGCAAGAAGTCCTGGATTAAGATAGGCGAGGTGGACGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp CCCTCTTCCACCTTGTTGGTGGAGAAGTTGGTGACTTaGCCGTCCACCTCGCCTATCTTAATCCAGGACTTC +
Preference number: 6 (lower is better)
Translates to: PSSTLLVEKLVT*PSTSPILIQDF
Trigger: GAAGTCCTGGATTAAGATAGGCGAGGTGGACGGCAAAGTCACCAACTTCTCCACCAACAAGGTGGAAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS CAA 90 bp TTCAGCTCCTTCCCATTGAACTTCCACACAAAGTTGGGCTCTTTCTaGGAGAGGCGGATCTCAAACACAGCTGTCTGGCGCTCTGTCACC +
Preference number: 6 (lower is better)
Translates to: FSSFPLNFHTKLGSF*ERRISNTAVWRSVT
Trigger: GGTGACAGAGCGCCAGACAGCTGTGTTTGAGATCCGCCTCTCCAAGAAAGAGCCCAACTTTGTGTGGAAGTTCAATGGGAAGGAGCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 90 bp TTGGTGACTTTGCCGTCCACCTCGCCTATCTTAATCCAGGACTTCTaGCCAACTGCCCTCCGTTCCACTATGAACTGTGTCACAGGTCGT +
Preference number: 6 (lower is better)
Translates to: LVTLPSTSPILIQDF*PTALRSTMNCVTGR
Trigger: ACGACCTGTGACACAGTTCATAGTGGAACGGAGGGCAGTTGGCAAGAAGTCCTGGATTAAGATAGGCGAGGTGGACGGCAAAGTCACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504981.5
ENST00000513874.6
CDS CAA 90 bp TCCATTATGCAGTCAAAGACCACTGTGGTGTCAACCTTGGTCTCTTaGTCTTCCAGGGGCTTCAGAATCCGGATGGCCTCCACCTCTACT +
Preference number: 6 (lower is better)
Translates to: SIMQSKTTVVSTLVS*SSRGFRIRMASTST
Trigger: AGTAGAGGTGGAGGCCATCCGGATTCTGAAGCCCCTGGAAGACAAAGAGACCAAGGTTGACACCACAGTGGTCTTTGACTGCATAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 90 bp CTAATAACCAGCATGTACTTGGTGCCCATCTGCTTCACATCGTACTaGCCCAGGGAGTACTGGATCCTCAGTGGCTCAGTACCCTTGATC +
Preference number: 6 (lower is better)
Translates to: LITSMYLVPICFTSY*PREYWILSGSVPLI
Trigger: GATCAAGGGTACTGAGCCACTGAGGATCCAGTACTCCCTGGGCAAGTACGATGTGAAGCAGATGGGCACCAAGTACATGCTGGTTATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 90 bp TCACACTCCAGGCATGCGCGACTCCTCTCTTTCACACGTACATTTTaGAGGTTGCTCACAAACTTGATGGGGATGCGGTCAACAGTGAGC +
Preference number: 6 (lower is better)
Translates to: SHSRHARLLSFTRTF*RLLTNLMGMRSTVS
Trigger: GCTCACTGTTGACCGCATCCCCATCAAGTTTGTGAGCAACCTCAAAAATGTACGTGTGAAAGAGAGGAGTCGCGCATGCCTGGAGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp ATTCATATTCTGTGTCCTCCAGGAGACCATCCACAGTaGACTTGGTGCCTGAAATGGGAAGATGAGGGGTCG +
Preference number: 6 (lower is better)
Translates to: IHILCPPGDHPQ*TWCLKWEDEGS
Trigger: CGACCCCTCATCTTCCCATTTCAGGCACCAAGTGCACTGTGGATGGTCTCCTGGAGGACACAGAATATGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504981.5
CDS CCA 72 bp TGTAGCAGGTGCCTGAGATGGGGATCTTTGTGCACTTaGACCACTCCTTTGTGTCTTCAGCCCTCATCTCAA +
Preference number: 6 (lower is better)
Translates to: CSRCLRWGSLCT*TTPLCLQPSSQ
Trigger: TTGAGATGAGGGCTGAAGACACAAAGGAGTGGTCCAAGTGCACAAAGATCCCCATCTCAGGCACCTGCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp GAGTGGTTTTTGCTCTTGGTAATTGTCTCTCGGCCCTaGGTGGGAACGCCATCTTTCTGCCAGATCACGTCA +
Preference number: 6 (lower is better)
Translates to: EWFLLLVIVSRP*VGTPSFCQITS
Trigger: TGACGTGATCTGGCAGAAAGATGGCGTTCCCACCAAGGGCCGAGAGACAATTACCAAGAGCAAAAACCACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 90 bp TCTTTCAGTTCCATTATGCAGTCAAAGACCACTGTGGTGTCAACCTaGGTCTCTTTGTCTTCCAGGGGCTTCAGAATCCGGATGGCCTCC +
Preference number: 6 (lower is better)
Translates to: SFSSIMQSKTTVVST*VSLSSRGFRIRMAS
Trigger: GGAGGCCATCCGGATTCTGAAGCCCCTGGAAGACAAAGAGACCAAGGTTGACACCACAGTGGTCTTTGACTGCATAATGGAACTGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp ACGTTGCTAATAACCAGCATGTACTTGGTGCCCATCTaGTTCACATCGTACTTGCCCAGGGAGTACTGGATC +
Preference number: 6 (lower is better)
Translates to: TLLITSMYLVPI*FTSYLPREYWI
Trigger: GATCCAGTACTCCCTGGGCAAGTACGATGTGAAGCAGATGGGCACCAAGTACATGCTGGTTATTAGCAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp TGTCACATCCTTGGATGTCAGCTCACACTCCAGGCATaGGCGACTCCTCTCTTTCACACGTACATTTTTGAG +
Preference number: 6 (lower is better)
Translates to: CHILGCQLTLQA*ATPLFHTYIFE
Trigger: CTCAAAAATGTACGTGTGAAAGAGAGGAGTCGCGCATGCCTGGAGTGTGAGCTGACATCCAAGGATGTGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CCA 72 bp CCATTATGCAGTCAAAGACCACTGTGGTGTCAACCTTaGTCTCTTTGTCTTCCAGGGGCTTCAGAATCCGGA +
Preference number: 6 (lower is better)
Translates to: PLCSQRPLWCQP*SLCLPGASESG
Trigger: TCCGGATTCTGAAGCCCCTGGAAGACAAAGAGACCAAGGTTGACACCACAGTGGTCTTTGACTGCATAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp TCCATTATGCAGTCAAAGACCACTGTGGTGTCAACCTaGGTCTCTTTGTCTTCCAGGGGCTTCAGAATCCGG +
Preference number: 6 (lower is better)
Translates to: SIMQSKTTVVST*VSLSSRGFRIR
Trigger: CCGGATTCTGAAGCCCCTGGAAGACAAAGAGACCAAGGTTGACACCACAGTGGTCTTTGACTGCATAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp GCGCGACTCCTCTCTTTCACACGTACATTTTTGAGGTaGCTCACAAACTTGATGGGGATGCGGTCAACAGTG +
Preference number: 6 (lower is better)
Translates to: ARLLSFTRTFLR*LTNLMGMRSTV
Trigger: CACTGTTGACCGCATCCCCATCAAGTTTGTGAGCAACCTCAAAAATGTACGTGTGAAAGAGAGGAGTCGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp AGGCATGCGCGACTCCTCTCTTTCACACGTACATTTTaGAGGTTGCTCACAAACTTGATGGGGATGCGGTCA +
Preference number: 6 (lower is better)
Translates to: RHARLLSFTRTF*RLLTNLMGMRS
Trigger: TGACCGCATCCCCATCAAGTTTGTGAGCAACCTCAAAAATGTACGTGTGAAAGAGAGGAGTCGCGCATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp CTGTCACTGAGTCTGGCATCCTTAATCTTAAGCGTGTaGGTCAGACCATCTTCGGACACCGTGATTTCATAC +
Preference number: 6 (lower is better)
Translates to: LSLSLASLILSV*VRPSSDTVISY
Trigger: GTATGAAATCACGGTGTCCGAAGATGGTCTGACGCACACGCTTAAGATTAAGGATGCCAGACTCAGTGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp ATCTCTTTCTCATTTGCCACCTTCTTCTGCTTCTTCTaGGGAGCAGGGGGTGCCCTCTTCTTCAGCATCTTT +
Preference number: 6 (lower is better)
Translates to: ISFSFATFFCFF*GAGGALFFSIF
Trigger: AAAGATGCTGAAGAAGAGGGCACCCCCTGCTCCCAAGAAGAAGCAGAAGAAGGTGGCAAATGAGAAAGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 90 bp TTAAGCGTGTGCGTCAGACCATCTTCGGACACCGTGATTTCATACTaGTCATCCCTCTTCAGCTCCTTCCCATTGAACTTCCACACAAAG +
Preference number: 6 (lower is better)
Translates to: LSVCVRPSSDTVISY*SSLFSSFPLNFHTK
Trigger: CTTTGTGTGGAAGTTCAATGGGAAGGAGCTGAAGAGGGATGACAAGTATGAAATCACGGTGTCCGAAGATGGTCTGACGCACACGCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp TCTTTCACACGTACATTTTTGAGGTTGCTCACAAACTaGATGGGGATGCGGTCAACAGTGAGCTGGGCCTTT +
Preference number: 6 (lower is better)
Translates to: SFTRTFLRLLTN*MGMRSTVSWAF
Trigger: AAAGGCCCAGCTCACTGTTGACCGCATCCCCATCAAGTTTGTGAGCAACCTCAAAAATGTACGTGTGAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 90 bp TTACCAGCAGAGATACGGTATAGATGGCATCTGCATGGTCATTGCTaGCAATGCACTTATAGTTGTCAGAGTCATCCGAAGTCAGTGGCT +
Preference number: 6 (lower is better)
Translates to: LPAEIRYRWHLHGHC*QCTYSCQSHPKSVA
Trigger: AGCCACTGACTTCGGATGACTCTGACAACTATAAGTGCATTGCAAGCAATGACCATGCAGATGCCATCTATACCGTATCTCTGCTGGTAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp CGGTATAGATGGCATCTGCATGGTCATTGCTTGCAATaGACTTATAGTTGTCAGAGTCATCCGAAGTCAGTG +
Preference number: 6 (lower is better)
Translates to: RYRWHLHGHCLQ*TYSCQSHPKSV
Trigger: CACTGACTTCGGATGACTCTGACAACTATAAGTGCATTGCAAGCAATGACCATGCAGATGCCATCTATACCG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp GCAGAGATACGGTATAGATGGCATCTGCATGGTCATTaGTTGCAATGCACTTATAGTTGTCAGAGTCATCCG +
Preference number: 6 (lower is better)
Translates to: AEIRYRWHLHGH*LQCTYSCQSHP
Trigger: CGGATGACTCTGACAACTATAAGTGCATTGCAAGCAATGACCATGCAGATGCCATCTATACCGTATCTCTGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS TCA 72 bp TCATGGGATGTTGTTAAAACTTCCAGAAGAGTTGGATaGGGGACTGTGTCAGTAGTTAATGGGTCCACTCAG +
Preference number: 6 (lower is better)
Translates to: SWDVVKTSRRVG*GTVSVVNGSTQ
Trigger: CTGAGTGGACCCATTAACTACTGACACAGTCCCTCATCCAACTCTTCTGGAAGTTTTAACAACATCCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504981.5
CDS TCA 72 bp TTATTTCCAGAACCGTGCCAGAGAGATCGTGATTGGTaGGTCTGGTTGAGTCCTGATCACCAGTATCTTTTT +
Preference number: 6 (lower is better)
Translates to: LFPEPCQRDRDW*VWLSPDHQYLF
Trigger: AAAAAGATACTGGTGATCAGGACTCAACCAGACTCACCAATCACGATCTCTCTGGCACGGTTCTGGAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510673.1
CDS CCA 72 bp CTTGACCTTCTGTTACCAGCAGAGATACGGTATAGATaGCATCTGCATGGTCATTGCTTGCAATGCACTTAT +
Preference number: 6 (lower is better)
Translates to: LDLLLPAEIRYR*HLHGHCLQCTY
Trigger: ATAAGTGCATTGCAAGCAATGACCATGCAGATGCCATCTATACCGTATCTCTGCTGGTAACAGAAGGTCAAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp GAGATACGGTATAGATGGCATCTGCATGGTCATTGCTaGCAATGCACTTATAGTTGTCAGAGTCATCCGAAG +
Preference number: 6 (lower is better)
Translates to: EIRYRWHLHGHC*QCTYSCQSHPK
Trigger: CTTCGGATGACTCTGACAACTATAAGTGCATTGCAAGCAATGACCATGCAGATGCCATCTATACCGTATCTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp TCCATGCACACCTTCTCAAAGTCTTTCTTGGGCACTTaGGACAAAATCTCCAGCATCTCTTTCTCATTTGCC +
Preference number: 6 (lower is better)
Translates to: SMHTFSKSFLGT*DKISSISFSFA
Trigger: GGCAAATGAGAAAGAGATGCTGGAGATTTTGTCCAAAGTGCCCAAGAAAGACTTTGAGAAGGTGTGCATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp AGTGGCTCAGTACCCTTGATCCATATCATCTTGACATaGGGGTCTTTCAGTTCCATTATGCAGTCAAAGACC +
Preference number: 6 (lower is better)
Translates to: SGSVPLIHIILT*GSFSSIMQSKT
Trigger: GGTCTTTGACTGCATAATGGAACTGAAAGACCCCAATGTCAAGATGATATGGATCAAGGGTACTGAGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CAA 72 bp ATCCTCAGTGGCTCAGTACCCTTGATCCATATCATCTaGACATTGGGGTCTTTCAGTTCCATTATGCAGTCA +
Preference number: 6 (lower is better)
Translates to: ILSGSVPLIHII*TLGSFSSIMQS
Trigger: TGACTGCATAATGGAACTGAAAGACCCCAATGTCAAGATGATATGGATCAAGGGTACTGAGCCACTGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp AGATACGGTATAGATGGCATCTGCATGGTCATTGCTTaGAATGCACTTATAGTTGTCAGAGTCATCCGAAGT +
Preference number: 6 (lower is better)
Translates to: RYGIDGICMVIA*NALIVVRVIRS
Trigger: ACTTCGGATGACTCTGACAACTATAAGTGCATTGCAAGCAATGACCATGCAGATGCCATCTATACCGTATCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS GCA 72 bp TTCTGTTACCAGCAGAGATACGGTATAGATGGCATCTaGATGGTCATTGCTTGCAATGCACTTATAGTTGTC +
Preference number: 6 (lower is better)
Translates to: FCYQQRYGIDGI*MVIACNALIVV
Trigger: GACAACTATAAGTGCATTGCAAGCAATGACCATGCAGATGCCATCTATACCGTATCTCTGCTGGTAACAGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6
CDS CCA 72 bp AACCATACTCCATGCACACCTTCTCAAAGTCTTTCTTaGGCACTTTGGACAAAATCTCCAGCATCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: NHTPCTPSQSLS*ALWTKSPASLS
Trigger: AGAAAGAGATGCTGGAGATTTTGTCCAAAGTGCCCAAGAAAGACTTTGAGAAGGTGTGCATGGAGTATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319338.6
ENST00000504981.5
ENST00000513874.6