RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGFN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000163395

Ensembl transcript IDs: ENST00000295591.12, ENST00000335211.9, ENST00000437879.6, ENST00000444705.2, ENST00000473483.1

Found 1025 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGGGCGAGCCCTGCACGGCACAGCTCATGCAGCACTCGCAGCCCTaGGGCAGCAGGTGGGACCGCAGGCCCACCAGGAACCGGGGCTTC +
Preference number: 1 (lower is better)
Translates to: RGEPCTAQLMQHSQP*GSRWDRRPTRNRGF
Trigger: GAAGCCCCGGTTCCTGGTGGGCCTGCGGTCCCACCTGCTGCCCCAGGGCTGCGAGTGCTGCATGAGCTGTGCCGTGCAGGGCTCGCCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR TCA 90 bp GGATGTGGGCGCTGCCGGGGCCCCGAGGTGCTGTCCATGTCAGTGTaGTGCCCTGGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGGG +
Preference number: 1 (lower is better)
Translates to: GCGRCRGPEVLSMSV*CPGWRPTGWLARKG
Trigger: CCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCCAGGGCATCACACTGACATGGACAGCACCTCGGGGCCCCGGCAGCGCCCACATCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 90 bp TGCACGGCACAGCTCATGCAGCACTCGCAGCCCTGGGGCAGCAGGTaGGACCGCAGGCCCACCAGGAACCGGGGCTTCTGGCTCAGGTCG +
Preference number: 1 (lower is better)
Translates to: CTAQLMQHSQPWGSR*DRRPTRNRGFWLRS
Trigger: CGACCTGAGCCAGAAGCCCCGGTTCCTGGTGGGCCTGCGGTCCCACCTGCTGCCCCAGGGCTGCGAGTGCTGCATGAGCTGTGCCGTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR TCA 90 bp TGCGGTCGGCTGCCTCGTGCCAGGGACCGTGCGCTGAGGAGCGTGTaGACACCGCGTAGTGCAGCGGGACATCCTGGGCCTCGTCAGGAG +
Preference number: 1 (lower is better)
Translates to: CGRLPRARDRALRSV*TPRSAAGHPGPRQE
Trigger: CTCCTGACGAGGCCCAGGATGTCCCGCTGCACTACGCGGTGTTCACACGCTCCTCAGCGCACGGTCCCTGGCACGAGGCAGCCGACCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR TCA 90 bp GTTGGTGTGGATGCGGTCGGCTGCCTCGTGCCAGGGACCGTGCGCTaGGGAGCGTGTGAACACCGCGTAGTGCAGCGGGACATCCTGGGC +
Preference number: 1 (lower is better)
Translates to: VGVDAVGCLVPGTVR*GACEHRVVQRDILG
Trigger: GCCCAGGATGTCCCGCTGCACTACGCGGTGTTCACACGCTCCTCAGCGCACGGTCCCTGGCACGAGGCAGCCGACCGCATCCACACCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 90 bp TATTCGTGGCCGGGGAGGATGCCCAGGAGGGTGAAGCGGTTGGTGTaGATGCGGTCGGCTGCCTCGTGCCAGGGACCGTGCGCTGAGGAG +
Preference number: 1 (lower is better)
Translates to: YSWPGRMPRRVKRLV*MRSAASCQGPCAEE
Trigger: CTCCTCAGCGCACGGTCCCTGGCACGAGGCAGCCGACCGCATCCACACCAACCGCTTCACCCTCCTGGGCATCCTCCCCGGCCACGAATA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR GCA 90 bp TGGTGCTGTCAGCGGGGGCCTCGCCCACCTTCAGCCAAGTGCTCCTaGCAGCCTGCCGTCTCTCCACCACGTAGCACTCTACAGTCCGGC +
Preference number: 1 (lower is better)
Translates to: WCCQRGPRPPSAKCS*QPAVSPPRSTLQSG
Trigger: GCCGGACTGTAGAGTGCTACGTGGTGGAGAGACGGCAGGCTGGCAGGAGCACTTGGCTGAAGGTGGGCGAGGCCCCCGCTGACAGCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR GCA 90 bp CTCGATCAGGTAGCCCAGGATGTGGGCGCTGCCGGGGCCCCGAGGTaGTGTCCATGTCAGTGTGATGCCCTGGCTGGAGGCCGACAGGAT +
Preference number: 1 (lower is better)
Translates to: LDQVAQDVGAAGAPR*CPCQCDALAGGRQD
Trigger: ATCCTGTCGGCCTCCAGCCAGGGCATCACACTGACATGGACAGCACCTCGGGGCCCCGGCAGCGCCCACATCCTGGGCTACCTGATCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 90 bp GCCTTCACTGTGAACCTGTCGCGCTGCCGGGGGATGCACCAGGGCTaGCTGGTGTCCGAGGGTTTGCTGGCCCCCAGCTCATTCTTGGCC +
Preference number: 1 (lower is better)
Translates to: AFTVNLSRCRGMHQG*LVSEGLLAPSSFLA
Trigger: GGCCAAGAATGAGCTGGGGGCCAGCAAACCCTCGGACACCAGCCAGCCCTGGTGCATCCCCCGGCAGCGCGACAGGTTCACAGTGAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 90 bp GCGGGGTTTCCTTCCAGGCTGCGGTCATTCTTGAACCAGGTGACGTaGGGCCGGGGCGAGCCCTGCACGGCACAGCTCATGCAGCACTCG +
Preference number: 1 (lower is better)
Translates to: AGFPSRLRSFLNQVT*GRGEPCTAQLMQHS
Trigger: CGAGTGCTGCATGAGCTGTGCCGTGCAGGGCTCGCCCCGGCCCCACGTCACCTGGTTCAAGAATGACCGCAGCCTGGAAGGAAACCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR TCA 90 bp CGAAGTAGCCCTCTCCAGGCCGAAGCCCCTTGGCCGTGTAGGTGGTaGCTGGCACGGTGCCCACATGGCACGGGAGCCACTGGAGACTGT +
Preference number: 1 (lower is better)
Translates to: RSSPLQAEAPWPCRW*LARCPHGTGATGDC
Trigger: ACAGTCTCCAGTGGCTCCCGTGCCATGTGGGCACCGTGCCAGTCACCACCTACACGGCCAAGGGGCTTCGGCCTGGAGAGGGCTACTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 90 bp TCTCTCCACCACGTAGCACTCTACAGTCCGGCCCCCATTGTCCCTTaGGGGCCGCCAGCGGAGGCAGACGCCAGCCCTATGGCAATCCTG +
Preference number: 1 (lower is better)
Translates to: SLHHVALYSPAPIVP*GPPAEADASPMAIL
Trigger: CAGGATTGCCATAGGGCTGGCGTCTGCCTCCGCTGGCGGCCCCCAAGGGACAATGGGGGCCGGACTGTAGAGTGCTACGTGGTGGAGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR TCA 90 bp GCACTCGGAAGGTATACTTCCTGCCTGGCTCCACATGGGCATCCGTaGAGGTGGTGCTGTCAGCGGGGGCCTCGCCCACCTTCAGCCAAG +
Preference number: 1 (lower is better)
Translates to: ALGRYTSCLAPHGHP*RWCCQRGPRPPSAK
Trigger: CTTGGCTGAAGGTGGGCGAGGCCCCCGCTGACAGCACCACCTTCACGGATGCCCATGTGGAGCCAGGCAGGAAGTATACCTTCCGAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR GCA 90 bp GTCCGCCACCGTCCACCTCCTCTCAGGCACCGGCTGGTCGTTCACTaGCGTCCAGGTGTTGCTCCCCTTCTTACGCCTCTCGATCAGGTA +
Preference number: 1 (lower is better)
Translates to: VRHRPPPLRHRLVVH*RPGVAPLLTPLDQV
Trigger: TACCTGATCGAGAGGCGTAAGAAGGGGAGCAACACCTGGACGGCAGTGAACGACCAGCCGGTGCCTGAGAGGAGGTGGACGGTGGCGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 90 bp GCCAGCGGAGGCAGACGCCAGCCCTATGGCAATCCTGAACCTCCATaGGGCCTTGTGGGGGATCAGGCTTGTCTTGCTGGCACCACTCAG +
Preference number: 1 (lower is better)
Translates to: ASGGRRQPYGNPEPP*GLVGDQACLAGTTQ
Trigger: CTGAGTGGTGCCAGCAAGACAAGCCTGATCCCCCACAAGGCCCCATGGAGGTTCAGGATTGCCATAGGGCTGGCGTCTGCCTCCGCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 90 bp TGTCCATGTCAGTGTGATGCCCTGGCTGGAGGCCGACAGGATGGCTaGCGCGGAAGGGGCCTTGGGGAGAGCCTCAGGAGCCACCAATAT +
Preference number: 1 (lower is better)
Translates to: CPCQCDALAGGRQDG*RGRGLGESLRSHQY
Trigger: ATATTGGTGGCTCCTGAGGCTCTCCCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCCAGGGCATCACACTGACATGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 90 bp CTGGCCCCCAGCTCATTCTTGGCCACCACCCTGAAGTGGTATTCGTaGCCGGGGAGGATGCCCAGGAGGGTGAAGCGGTTGGTGTGGATG +
Preference number: 1 (lower is better)
Translates to: LAPSSFLATTLKWYS*PGRMPRRVKRLVWM
Trigger: CATCCACACCAACCGCTTCACCCTCCTGGGCATCCTCCCCGGCCACGAATACCACTTCAGGGTGGTGGCCAAGAATGAGCTGGGGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 90 bp GAGGGTTTGCTGGCCCCCAGCTCATTCTTGGCCACCACCCTGAAGTaGTATTCGTGGCCGGGGAGGATGCCCAGGAGGGTGAAGCGGTTG +
Preference number: 1 (lower is better)
Translates to: EGLLAPSSFLATTLK*YSWPGRMPRRVKRL
Trigger: CAACCGCTTCACCCTCCTGGGCATCCTCCCCGGCCACGAATACCACTTCAGGGTGGTGGCCAAGAATGAGCTGGGGGCCAGCAAACCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR TCA 90 bp CCGAGCAAAGACAGCATCCGATGGAGGTCCAGGCTCTCCGGGACCTaGGGGAGCCACAGCTGTGACCCGGAACTCATACTGACAGCCCTG +
Preference number: 1 (lower is better)
Translates to: PSKDSIRWRSRLSGT*GSHSCDPELILTAL
Trigger: CAGGGCTGTCAGTATGAGTTCCGGGTCACAGCTGTGGCTCCCTCAGGTCCCGGAGAGCCTGGACCTCCATCGGATGCTGTCTTTGCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR GCA 90 bp ACCTCCTCTCAGGCACCGGCTGGTCGTTCACTGCCGTCCAGGTGTTaGTCCCCTTCTTACGCCTCTCGATCAGGTAGCCCAGGATGTGGG +
Preference number: 1 (lower is better)
Translates to: TSSQAPAGRSLPSRC*SPSYASRSGSPGCG
Trigger: CCCACATCCTGGGCTACCTGATCGAGAGGCGTAAGAAGGGGAGCAACACCTGGACGGCAGTGAACGACCAGCCGGTGCCTGAGAGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR TCA 90 bp TCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTaGAGCTTCAAGGGTCCAGGACCATCCCAGGGTGAGGTGAGGCTA +
Preference number: 1 (lower is better)
Translates to: SILGIGFPGQCRCRK*SFKGPGPSQGEVRL
Trigger: TAGCCTCACCTCACCCTGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR GCA 90 bp AGGCTAGGTGCTGGGTTCTATGACAATGAGGGTGGCAGTGCTGACTaGCTGGCCCAGCGTGTTCTCAGCCACAGCCTTGTACTCCCCGCT +
Preference number: 1 (lower is better)
Translates to: RLGAGFYDNEGGSAD*LAQRVLSHSLVLPA
Trigger: AGCGGGGAGTACAAGGCTGTGGCTGAGAACACGCTGGGCCAGGCAGTCAGCACTGCCACCCTCATTGTCATAGAACCCAGCACCTAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 90 bp CCAGCCCAGCTCAGAGTGATGCTGGTGTTCGATCTGTCTGTGACTTaGAGATTCCTCACCAGCCCAGGGGGTCTCATGGGGTCCCGAGCA +
Preference number: 1 (lower is better)
Translates to: PAQLRVMLVFDLSVT*RFLTSPGGLMGSRA
Trigger: TGCTCGGGACCCCATGAGACCCCCTGGGCTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGCATCACTCTGAGCTGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR TCA 90 bp ACCCATATGGTGAGGGTCCAGGAGGTTCGCTGTCATTCTGTTGAGTaGCTTAGCTTGGAGCCAGGAGGTGGAATGCCCTCCTCCCTTGTT +
Preference number: 1 (lower is better)
Translates to: THMVRVQEVRCHSVE*LSLEPGGGMPSSLV
Trigger: AACAAGGGAGGAGGGCATTCCACCTCCTGGCTCCAAGCTAAGTCACTCAACAGAATGACAGCGAACCTCCTGGACCCTCACCATATGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
3UTR TCA 90 bp TGCCCTCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTaGGGGTCCAGGAGGTTCGCTGTCATTCTGTTGAGTGACTTAGCT +
Preference number: 1 (lower is better)
Translates to: CPLDLLKRRRKKPIW*GSRRFAVILLSDLA
Trigger: AGCTAAGTCACTCAACAGAATGACAGCGAACCTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
3UTR-3UTR GCA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCCAGGATGTGGGCGCTaGCGGGGCCCCGAGGTGCTG +
Preference number: 2 (lower is better)
Translates to: ALGTASILGIGFPGQCRCPGCGR*RGPEVL
Trigger: CAGCACCTCGGGGCCCCGGCAGCGCCCACATCCTGG...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CCA 90 bp CACAGCTGTGACCCGGAACTCATACTGACAGCCCTGCCGCACGTCCGCCACCGTGCCCCCATTGTCCCTTaGGGGCCGCCAGCGGAGGCA +
Preference number: 2 (lower is better)
Translates to: HSCDPELILTALPHVRHRAPIVP*GPPAEA
Trigger: TGCCTCCGCTGGCGGCCCCCAAGGGACAATGGGGGC...ACGGTGGCGGACGTGCGGCAGGGCTGTCAGTATGAGTTCCGGGTCACAGCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CCA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTGGCCGACAGGATGGCTaGCGCGGAAGGGGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: ALGTASILGIGFPGQCRCGRQDG*RGRGLG
Trigger: CCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCC...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR GCA 90 bp AGGGTGAAGCGGTTGGTGTGGATGCGGTCGGCTGCCTCGTGCCAGGGACCGTGCCGGCTGGTCGTTCACTaGCGTCCAGGTGTTGCTCCC +
Preference number: 2 (lower is better)
Translates to: RVKRLVWMRSAASCQGPCRLVVH*RPGVAP
Trigger: GGGAGCAACACCTGGACGGCAGTGAACGACCAGCCG...GCACGGTCCCTGGCACGAGGCAGCCGACCGCATCCACACCAACCGCTTCACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CCA 90 bp GGGCCCCGAGGTGCTGTCCATGTCAGTGTGATGCCCTGGCTGGAGGCCGACAGGGGCACCACTCAGGGCTaGGGACCACCATCCTACCCA +
Preference number: 2 (lower is better)
Translates to: GPRGAVHVSVMPWLEADRGTTQG*GPPSYP
Trigger: TGGGTAGGATGGTGGTCCCCAGCCCTGAGTGGTGCC...CCTGTCGGCCTCCAGCCAGGGCATCACACTGACATGGACAGCACCTCGGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CCA 90 bp AGGGTGAAGCGGTTGGTGTGGATGCGGTCGGCTGCCTCGTGCCAGGGACCGTGCGCCCAGGGGGTCTCATaGGGTCCCGAGCAAAGACAG +
Preference number: 2 (lower is better)
Translates to: RVKRLVWMRSAASCQGPCAQGVS*GPEQRQ
Trigger: CTGTCTTTGCTCGGGACCCCATGAGACCCCCTGGGC...GCACGGTCCCTGGCACGAGGCAGCCGACCGCATCCACACCAACCGCTTCACCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CAA 90 bp GTCTCTCCACCACGTAGCACTCTACAGTCCGGCCCCCATTGTCCCTaGGGGGCCGCCAGCGGAGGCAGACGCCAGCCCTATGGCAATCCT +
Preference number: 2 (lower is better)
Translates to: VSPPRSTLQSGPHCP*GAASGGRRQPYGNP
Trigger: AGGATTGCCATAGGGCTGGCGTCTGCCTCCGCTGGCGGCCCCCAAGGGACAATGGGGGCCGGACTGTAGAGTGCTACGTGGTGGAGAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CAA 90 bp CAGGGCTGGCTGGTGTCCGAGGGTTTGCTGGCCCCCAGCTCATTCTaGGCCACCACCCTGAAGTGGTATTCGTGGCCGGGGAGGATGCCC +
Preference number: 2 (lower is better)
Translates to: QGWLVSEGLLAPSSF*ATTLKWYSWPGRMP
Trigger: GGGCATCCTCCCCGGCCACGAATACCACTTCAGGGTGGTGGCCAAGAATGAGCTGGGGGCCAGCAAACCCTCGGACACCAGCCAGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CAA 90 bp TCGCGCTGCCGGGGGATGCACCAGGGCTGGCTGGTGTCCGAGGGTTaGCTGGCCCCCAGCTCATTCTTGGCCACCACCCTGAAGTGGTAT +
Preference number: 2 (lower is better)
Translates to: SRCRGMHQGWLVSEG*LAPSSFLATTLKWY
Trigger: ATACCACTTCAGGGTGGTGGCCAAGAATGAGCTGGGGGCCAGCAAACCCTCGGACACCAGCCAGCCCTGGTGCATCCCCCGGCAGCGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR TCA 90 bp AGCGGTTGGTGTGGATGCGGTCGGCTGCCTCGTGCCAGGGACCGTGCGCTGAGGTACCCAGCAACTTCCTaGGGGCCCAGTGTATTGGGG +
Preference number: 2 (lower is better)
Translates to: SGWCGCGRLPRARDRALRYPATS*GPSVLG
Trigger: CCCCAATACACTGGGCCCTCAGGAAGTTGCTGGGTA...CCTCAGCGCACGGTCCCTGGCACGAGGCAGCCGACCGCATCCACACCAACCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR TCA 90 bp AGCGGTTGGTGTGGATGCGGTCGGCTGCCTCGTGCCAGGGACCGTGCGCTGAGGGCCCTATGGCAATCCTaGACCTCCATGGGGCCTTGT +
Preference number: 2 (lower is better)
Translates to: SGWCGCGRLPRARDRALRALWQS*TSMGPC
Trigger: ACAAGGCCCCATGGAGGTTCAGGATTGCCATAGGGC...CCTCAGCGCACGGTCCCTGGCACGAGGCAGCCGACCGCATCCACACCAACCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CCA 90 bp CTCGGCCGTCACCGTCCCAGGCACGTTCTCCTGCAGGTGGATGGGCCCAGGGGCAATCCTGAACCTCCATaGGGCCTTGTGGGGGATCAG +
Preference number: 2 (lower is better)
Translates to: LGRHRPRHVLLQVDGPRGNPEPP*GLVGDQ
Trigger: CTGATCCCCCACAAGGCCCCATGGAGGTTCAGGATT...GCCCCTGGGCCCATCCACCTGCAGGAGAACGTGCCTGGGACGGTGACGGCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR GCA 90 bp AGGGTGAAGCGGTTGGTGTGGATGCGGTCGGCTGCCTCGTGCCAGGGACCGTGCCTGCCGTCCAGGTGTTaGTCCCCTTCTTACGCCTCT +
Preference number: 2 (lower is better)
Translates to: RVKRLVWMRSAASCQGPCLPSRC*SPSYAS
Trigger: AGAGGCGTAAGAAGGGGAGCAACACCTGGACGGCAG...GCACGGTCCCTGGCACGAGGCAGCCGACCGCATCCACACCAACCGCTTCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CCA 90 bp GGCGCTGCCGGGGCCCCGAGGTGCTGTCCATGTCAGTGTGATGCCCTGGCTGGAGAGGGCCCAGTGTATTaGGGTCAGAGAAGCATAACC +
Preference number: 2 (lower is better)
Translates to: GAAGAPRCCPCQCDALAGEGPVY*GQRSIT
Trigger: GGTTATGCTTCTCTGACCCCAATACACTGGGCCCTC...TCCAGCCAGGGCATCACACTGACATGGACAGCACCTCGGGGCCCCGGCAGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR TCA 90 bp TCCAGGGCCTCGCCAGCCCCCTCTGAGGTCACAGCCCGCACTCGGAAGGTATACTGCAGGTGTCGGAAGTaGAGCTTCAAGGGTCCAGGA +
Preference number: 2 (lower is better)
Translates to: SRASPAPSEVTARTRKVYCRCRK*SFKGPG
Trigger: TCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCA...GTATACCTTCCGAGTGCGGGCTGTGACCTCAGAGGGGGCTGGCGAGGCCCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR GCA 90 bp AGGTCAGTGCTGTACACCGCGGGGTTTCCTTCCAGGCTGCGGTCATTCTTGAACGTGGATGCGGTCGGCTaGCTCGTGCCAGGGACCGTG +
Preference number: 2 (lower is better)
Translates to: RSVLYTAGFPSRLRSFLNVDAVG*LVPGTV
Trigger: CACGGTCCCTGGCACGAGGCAGCCGACCGCATCCAC...GTTCAAGAATGACCGCAGCCTGGAAGGAAACCCCGCGGTGTACAGCACTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CCA 90 bp AGCCTGCCGTCTCTCCACCACGTAGCACTCTACAGTCCGGCCCCCATTGTCCCTCTCCATCCTTGGGATTaGCTTCCCGGGCCAGTGCAG +
Preference number: 2 (lower is better)
Translates to: SLPSLHHVALYSPAPIVPLHPWD*LPGPVQ
Trigger: CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG...AGGGACAATGGGGGCCGGACTGTAGAGTGCTACGTGGTGGAGAGACGGCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CCA 90 bp AGCCTGCCGTCTCTCCACCACGTAGCACTCTACAGTCCGGCCCCCATTGTCCCTCACAGCCTCCATCCTTaGGATTGGCTTCCCGGGCCA +
Preference number: 2 (lower is better)
Translates to: SLPSLHHVALYSPAPIVPHSLHP*DWLPGP
Trigger: TGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG...AGGGACAATGGGGGCCGGACTGTAGAGTGCTACGTGGTGGAGAGACGGCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CCA 90 bp GCTGGTGTCCGAGGGTTTGCTGGCCCCCAGCTCATTCTTGGCCACCACCCTGAACGTGTAGGTGGTGACTaGCACGGTGCCCACATGGCA +
Preference number: 2 (lower is better)
Translates to: AGVRGFAGPQLILGHHPERVGGD*HGAHMA
Trigger: TGCCATGTGGGCACCGTGCCAGTCACCACCTACACG...TTCAGGGTGGTGGCCAAGAATGAGCTGGGGGCCAGCAAACCCTCGGACACCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CAA 90 bp CCCAGCCCAGCTCAGAGTGATGCTGGTGTTCGATCTGTCTGTGACTaGGAGATTCCTCACCAGCCCAGGGGGTCTCATGGGGTCCCGAGC +
Preference number: 2 (lower is better)
Translates to: PSPAQSDAGVRSVCD*EIPHQPRGSHGVPS
Trigger: GCTCGGGACCCCATGAGACCCCCTGGGCTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGCATCACTCTGAGCTGGGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR TCA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTTGCAGGTGTCGGAAGTaGAGCTTCAAGGGTCCAGGA +
Preference number: 2 (lower is better)
Translates to: ALGTASILGIGFPGQCRCCRCRK*SFKGPG
Trigger: TCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCA...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
3UTR-3UTR TCA 90 bp CACCACCCTGAAGTGGTATTCGTGGCCGGGGAGGATGCCCAGGAGGGTGAAGCGCAGCCCAGCTCAGAGTaGTGCTGGTGTTCGATCTGT +
Preference number: 2 (lower is better)
Translates to: HHPEVVFVAGEDAQEGEAQPSSE*CWCSIC
Trigger: ACAGATCGAACACCAGCATCACTCTGAGCTGGGCTG...CGCTTCACCCTCCTGGGCATCCTCCCCGGCCACGAATACCACTTCAGGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CCA 90 bp CACCACCCTGAAGTGGTATTCGTGGCCGGGGAGGATGCCCAGGAGGGTGAAGCGGGTATACTTCCTGCCTaGCTCCACATGGGCATCCGT +
Preference number: 2 (lower is better)
Translates to: HHPEVVFVAGEDAQEGEAGILPA*LHMGIR
Trigger: ACGGATGCCCATGTGGAGCCAGGCAGGAAGTATACC...CGCTTCACCCTCCTGGGCATCCTCCCCGGCCACGAATACCACTTCAGGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CCA 90 bp GCTGGTGTCCGAGGGTTTGCTGGCCCCCAGCTCATTCTTGGCCACCACCCTGAAAAAGACAGCATCCGATaGAGGTCCAGGCTCTCCGGG +
Preference number: 2 (lower is better)
Translates to: AGVRGFAGPQLILGHHPEKDSIR*RSRLSG
Trigger: CCCGGAGAGCCTGGACCTCCATCGGATGCTGTCTTT...TTCAGGGTGGTGGCCAAGAATGAGCTGGGGGCCAGCAAACCCTCGGACACCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CAA 90 bp ACTCCCATTTTCCTGGGGCTCTGGGCACAGCCTCCATCCTTGGGATaGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGG +
Preference number: 2 (lower is better)
Translates to: TPIFLGLWAQPPSLG*ASRASAGVGSEASR
Trigger: CCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCAGGAAAATGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
3UTR-3UTR CCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCCTCCATCCTTGGGATTaGCTTCCCGGGCCAGTGCAG +
Preference number: 2 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPLHPWD*LPGPVQ
Trigger: CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
3UTR-3UTR GCA 90 bp TCGGAAGGTATACTTCCTGCCTGGCTCCACATGGGCATCCGTGAAGGTGGTGCTTCAGCCAAGTGCTCCTaGCAGCCTGCCGTCTCTCCA +
Preference number: 2 (lower is better)
Translates to: SEGILPAWLHMGIREGGASAKCS*QPAVSP
Trigger: TGGAGAGACGGCAGGCTGGCAGGAGCACTTGGCTGA...AGCACCACCTTCACGGATGCCCATGTGGAGCCAGGCAGGAAGTATACCTTCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CCA 90 bp TCTGTGACTTGGAGATTCCTCACCAGCCCAGGGGGTCTCATGGGGTCCCGAGCAATTTTCCTGGGGCTCTaGGCACAGCCTCCATCCTTG +
Preference number: 2 (lower is better)
Translates to: SVTWRFLTSPGGLMGSRAIFLGL*AQPPSL
Trigger: CAAGGATGGAGGCTGTGCCCAGAGCCCCAGGAAAAT...TGCTCGGGACCCCATGAGACCCCCTGGGCTGGTGAGGAATCTCCAAGTCACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CCA 90 bp AGGTCAGTGCTGTACACCGCGGGGTTTCCTTCCAGGCTGCGGTCATTCTTGAACCTGCCTGGCTCCACATaGGCATCCGTGAAGGTGGTG +
Preference number: 2 (lower is better)
Translates to: RSVLYTAGFPSRLRSFLNLPGST*ASVKVV
Trigger: CACCACCTTCACGGATGCCCATGTGGAGCCAGGCAG...GTTCAAGAATGACCGCAGCCTGGAAGGAAACCCCGCGGTGTACAGCACTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CCA 90 bp AGGTCAGTGCTGTACACCGCGGGGTTTCCTTCCAGGCTGCGGTCATTCTTGAACTGGCACGGGAGCCACTaGAGACTGTCTGAGCTGCAC +
Preference number: 2 (lower is better)
Translates to: RSVLYTAGFPSRLRSFLNWHGSH*RLSELH
Trigger: GTGCAGCTCAGACAGTCTCCAGTGGCTCCCGTGCCA...GTTCAAGAATGACCGCAGCCTGGAAGGAAACCCCGCGGTGTACAGCACTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR GCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCATCCTGCAGGCAGGTaGCCTCTGGATCTCCTGAAG +
Preference number: 2 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCHPAGR*PLDLLK
Trigger: CTTCAGGAGATCCAGAGGGCACCTGCCTGCAGGATG...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
3UTR-3UTR GCA 90 bp AGGTCAGTGCTGTACACCGCGGGGTTTCCTTCCAGGCTGCGGTCATTCTTGAACGGAAGGTATACTTCCTaGCTGGCTCCACATGGGCAT +
Preference number: 2 (lower is better)
Translates to: RSVLYTAGFPSRLRSFLNGRYTS*LAPHGH
Trigger: ATGCCCATGTGGAGCCAGGCAGGAAGTATACCTTCC...GTTCAAGAATGACCGCAGCCTGGAAGGAAACCCCGCGGTGTACAGCACTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCATTTTCCTGGGGCTCTaGGCACAGCCTCCATCCTTG +
Preference number: 2 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCIFLGL*AQPPSL
Trigger: CAAGGATGGAGGCTGTGCCCAGAGCCCCAGGAAAAT...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
3UTR-3UTR CCA 90 bp AGTGATGCTGGTGTTCGATCTGTCTGTGACTTGGAGATTCCTCACCAGCCCAGGCTTGGAGCCAGGAGGTaGAATGCCCTCCTCCCTTGT +
Preference number: 2 (lower is better)
Translates to: SDAGVRSVCDLEIPHQPRLGARR*NALLPC
Trigger: ACAAGGGAGGAGGGCATTCCACCTCCTGGCTCCAAG...CCTGGGCTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGCATCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR TCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGTGCAGGTGTCGGAAGTaGAGCTTCAAGGGTCCAGGA +
Preference number: 2 (lower is better)
Translates to: SGSPEAKKKETHMVRVQECRCRK*SFKGPG
Trigger: TCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCA...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
3UTR-3UTR GCA 90 bp GCTCAGAGTGATGCTGGTGTTCGATCTGTCTGTGACTTGGAGATTCCTCACCAGAGCCAGGAGGTGGAATaGCCTCCTCCCTTGTTTTTC +
Preference number: 2 (lower is better)
Translates to: AQSDAGVRSVCDLEIPHQSQEVE*PPPLFF
Trigger: GAAAAACAAGGGAGGAGGGCATTCCACCTCCTGGCT...CTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGCATCACTCTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR GCA 90 bp ACATGGCACGGGAGCCACTGGAGACTGTCTGAGCTGCACAGCTCCACCACATACTGTGTTCATCTCAACTaGTTCTTCCTAAGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: TWHGSHWRLSELHSSTTYCVHLN*FFLSSL
Trigger: CAGACTGCTTAGGAAGAAGCAGTTGAGATGAACACA...GTATGTGGTGGAGCTGTGCAGCTCAGACAGTCTCCAGTGGCTCCCGTGCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR GCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAAGCCAGGAGGTGGAATaGCCTCCTCCCTTGTTTTTC +
Preference number: 2 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPSQEVE*PPPLFF
Trigger: GAAAAACAAGGGAGGAGGGCATTCCACCTCCTGGCT...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
3UTR TCA 72 bp CGCTGCCGGGGCCCCGAGGTGCTGTCCATGTCAGTGTaGTGCCCTGGCTGGAGGCCGACAGGATGGCTGGCG +
Preference number: 3 (lower is better)
Translates to: RCRGPEVLSMSV*CPGWRPTGWLA
Trigger: CGCCAGCCATCCTGTCGGCCTCCAGCCAGGGCATCACACTGACATGGACAGCACCTCGGGGCCCCGGCAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 72 bp CAGCTCATGCAGCACTCGCAGCCCTGGGGCAGCAGGTaGGACCGCAGGCCCACCAGGAACCGGGGCTTCTGG +
Preference number: 3 (lower is better)
Translates to: QLMQHSQPWGSR*DRRPTRNRGFW
Trigger: CCAGAAGCCCCGGTTCCTGGTGGGCCTGCGGTCCCACCTGCTGCCCCAGGGCTGCGAGTGCTGCATGAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR TCA 72 bp GATGCGGTCGGCTGCCTCGTGCCAGGGACCGTGCGCTaGGGAGCGTGTGAACACCGCGTAGTGCAGCGGGAC +
Preference number: 3 (lower is better)
Translates to: DAVGCLVPGTVR*GACEHRVVQRD
Trigger: GTCCCGCTGCACTACGCGGTGTTCACACGCTCCTCAGCGCACGGTCCCTGGCACGAGGCAGCCGACCGCATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR GCA 72 bp GTAGCCCAGGATGTGGGCGCTGCCGGGGCCCCGAGGTaGTGTCCATGTCAGTGTGATGCCCTGGCTGGAGGC +
Preference number: 3 (lower is better)
Translates to: VAQDVGAAGAPR*CPCQCDALAGG
Trigger: GCCTCCAGCCAGGGCATCACACTGACATGGACAGCACCTCGGGGCCCCGGCAGCGCCCACATCCTGGGCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 72 bp CAGTGTGATGCCCTGGCTGGAGGCCGACAGGATGGCTaGCGCGGAAGGGGCCTTGGGGAGAGCCTCAGGAGC +
Preference number: 3 (lower is better)
Translates to: QCDALAGGRQDG*RGRGLGESLRS
Trigger: GCTCCTGAGGCTCTCCCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCCAGGGCATCACACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 72 bp GGGCCCCGAGGTGCTGTCCATGTCAGTGTGATGCCCTaGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGG +
Preference number: 3 (lower is better)
Translates to: GPRGAVHVSVMP*LEADRMAGAEG
Trigger: CCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCCAGGGCATCACACTGACATGGACAGCACCTCGGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 72 bp GTGAACCTGTCGCGCTGCCGGGGGATGCACCAGGGCTaGCTGGTGTCCGAGGGTTTGCTGGCCCCCAGCTCA +
Preference number: 3 (lower is better)
Translates to: VNLSRCRGMHQG*LVSEGLLAPSS
Trigger: TGAGCTGGGGGCCAGCAAACCCTCGGACACCAGCCAGCCCTGGTGCATCCCCCGGCAGCGCGACAGGTTCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CAA 90 bp CACTGCCGTCCAGGTGTTGCTCCCCTTCTTACGCCTCTCGATCAGGTAGCCCAGGGCCCCCATTGTCCCTaGGGGGCCGCCAGCGGAGGC +
Preference number: 3 (lower is better)
Translates to: HCRPGVAPLLTPLDQVAQGPHCP*GAASGG
Trigger: GCCTCCGCTGGCGGCCCCCAAGGGACAATGGGGGCC...CTGGGCTACCTGATCGAGAGGCGTAAGAAGGGGAGCAACACCTGGACGGCAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CAA 90 bp CGGTGCCCACATGGCACGGGAGCCACTGGAGACTGTCTGAGCTGCACAGCTCCAACAGTCCGGCCCCCATaGTCCCTTGGGGGCCGCCAG +
Preference number: 3 (lower is better)
Translates to: RCPHGTGATGDCLSCTAPTVRPP*SLGGRQ
Trigger: CTGGCGGCCCCCAAGGGACAATGGGGGCCGGACTGT...TGGAGCTGTGCAGCTCAGACAGTCTCCAGTGGCTCCCGTGCCATGTGGGCACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR TCA 72 bp CCTCTCCAGGCCGAAGCCCCTTGGCCGTGTAGGTGGTaGCTGGCACGGTGCCCACATGGCACGGGAGCCACT +
Preference number: 3 (lower is better)
Translates to: PLQAEAPWPCRW*LARCPHGTGAT
Trigger: AGTGGCTCCCGTGCCATGTGGGCACCGTGCCAGTCACCACCTACACGGCCAAGGGGCTTCGGCCTGGAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR TCA 72 bp CTGCCTCGTGCCAGGGACCGTGCGCTGAGGAGCGTGTaGACACCGCGTAGTGCAGCGGGACATCCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: LPRARDRALRSV*TPRSAAGHPGP
Trigger: AGGCCCAGGATGTCCCGCTGCACTACGCGGTGTTCACACGCTCCTCAGCGCACGGTCCCTGGCACGAGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR GCA 72 bp TGCTGTCAGCGGGGGCCTCGCCCACCTTCAGCCAAGTaGTCCTGCCAGCCTGCCGTCTCTCCACCACGTAGC +
Preference number: 3 (lower is better)
Translates to: CCQRGPRPPSAK*SCQPAVSPPRS
Trigger: GCTACGTGGTGGAGAGACGGCAGGCTGGCAGGAGCACTTGGCTGAAGGTGGGCGAGGCCCCCGCTGACAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR GCA 72 bp TTCTTGAACCAGGTGACGTGGGGCCGGGGCGAGCCCTaGACGGCACAGCTCATGCAGCACTCGCAGCCCTGG +
Preference number: 3 (lower is better)
Translates to: FLNQVTWGRGEP*TAQLMQHSQPW
Trigger: CCAGGGCTGCGAGTGCTGCATGAGCTGTGCCGTGCAGGGCTCGCCCCGGCCCCACGTCACCTGGTTCAAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 72 bp TCCAGGCCGAAGCCCCTTGGCCGTGTAGGTGGTGACTaGCACGGTGCCCACATGGCACGGGAGCCACTGGAG +
Preference number: 3 (lower is better)
Translates to: SRPKPLGRVGGD*HGAHMAREPLE
Trigger: CTCCAGTGGCTCCCGTGCCATGTGGGCACCGTGCCAGTCACCACCTACACGGCCAAGGGGCTTCGGCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 72 bp ACCTGTCGCGCTGCCGGGGGATGCACCAGGGCTGGCTaGTGTCCGAGGGTTTGCTGGCCCCCAGCTCATTCT +
Preference number: 3 (lower is better)
Translates to: TCRAAGGCTRAG*CPRVCWPPAHS
Trigger: AGAATGAGCTGGGGGCCAGCAAACCCTCGGACACCAGCCAGCCCTGGTGCATCCCCCGGCAGCGCGACAGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR GCA 72 bp CAGCGGGGGCCTCGCCCACCTTCAGCCAAGTGCTCCTaGCAGCCTGCCGTCTCTCCACCACGTAGCACTCTA +
Preference number: 3 (lower is better)
Translates to: QRGPRPPSAKCS*QPAVSPPRSTL
Trigger: TAGAGTGCTACGTGGTGGAGAGACGGCAGGCTGGCAGGAGCACTTGGCTGAAGGTGGGCGAGGCCCCCGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR GCA 72 bp GTGAAGCGGTTGGTGTGGATGCGGTCGGCTGCCTCGTaGCAGGGACCGTGCGCTGAGGAGCGTGTGAACACC +
Preference number: 3 (lower is better)
Translates to: VKRLVWMRSAAS*QGPCAEERVNT
Trigger: GGTGTTCACACGCTCCTCAGCGCACGGTCCCTGGCACGAGGCAGCCGACCGCATCCACACCAACCGCTTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 72 bp CCTTCCAGGCTGCGGTCATTCTTGAACCAGGTGACGTaGGGCCGGGGCGAGCCCTGCACGGCACAGCTCATG +
Preference number: 3 (lower is better)
Translates to: PSRLRSFLNQVT*GRGEPCTAQLM
Trigger: CATGAGCTGTGCCGTGCAGGGCTCGCCCCGGCCCCACGTCACCTGGTTCAAGAATGACCGCAGCCTGGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR TCA 72 bp AGTGGTATTCGTGGCCGGGGAGGATGCCCAGGAGGGTaGAGCGGTTGGTGTGGATGCGGTCGGCTGCCTCGT +
Preference number: 3 (lower is better)
Translates to: SGIRGRGGCPGG*SGWCGCGRLPR
Trigger: ACGAGGCAGCCGACCGCATCCACACCAACCGCTTCACCCTCCTGGGCATCCTCCCCGGCCACGAATACCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 72 bp CTGGCCCCCAGCTCATTCTTGGCCACCACCCTGAAGTaGTATTCGTGGCCGGGGAGGATGCCCAGGAGGGTG +
Preference number: 3 (lower is better)
Translates to: LAPSSFLATTLK*YSWPGRMPRRV
Trigger: CACCCTCCTGGGCATCCTCCCCGGCCACGAATACCACTTCAGGGTGGTGGCCAAGAATGAGCTGGGGGCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR TCA 72 bp AGGTATACTTCCTGCCTGGCTCCACATGGGCATCCGTaGAGGTGGTGCTGTCAGCGGGGGCCTCGCCCACCT +
Preference number: 3 (lower is better)
Translates to: RYTSCLAPHGHP*RWCCQRGPRPP
Trigger: AGGTGGGCGAGGCCCCCGCTGACAGCACCACCTTCACGGATGCCCATGTGGAGCCAGGCAGGAAGTATACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR TCA 72 bp GGTGCCCACATGGCACGGGAGCCACTGGAGACTGTCTaGGCTGCACAGCTCCACCACATACCCCTGGGCTTC +
Preference number: 3 (lower is better)
Translates to: GAHMAREPLETV*AAQLHHIPLGF
Trigger: GAAGCCCAGGGGTATGTGGTGGAGCTGTGCAGCTCAGACAGTCTCCAGTGGCTCCCGTGCCATGTGGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR GCA 72 bp CGTCCACCTCCTCTCAGGCACCGGCTGGTCGTTCACTaGCGTCCAGGTGTTGCTCCCCTTCTTACGCCTCTC +
Preference number: 3 (lower is better)
Translates to: RPPPLRHRLVVH*RPGVAPLLTPL
Trigger: GAGAGGCGTAAGAAGGGGAGCAACACCTGGACGGCAGTGAACGACCAGCCGGTGCCTGAGAGGAGGTGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR TCA 72 bp GGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTaGAGCTTCAAGGGTCCAGGACCATCCCAGGGTGAG +
Preference number: 3 (lower is better)
Translates to: GIGFPGQCRCRK*SFKGPGPSQGE
Trigger: CTCACCCTGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
3UTR TCA 72 bp GTTTGCTGGCCCCCAGCTCATTCTTGGCCACCACCCTaGAGTGGTATTCGTGGCCGGGGAGGATGCCCAGGA +
Preference number: 3 (lower is better)
Translates to: VCWPPAHSWPPP*SGIRGRGGCPG
Trigger: TCCTGGGCATCCTCCCCGGCCACGAATACCACTTCAGGGTGGTGGCCAAGAATGAGCTGGGGGCCAGCAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR GCA 72 bp CAGGCACCGGCTGGTCGTTCACTGCCGTCCAGGTGTTaGTCCCCTTCTTACGCCTCTCGATCAGGTAGCCCA +
Preference number: 3 (lower is better)
Translates to: QAPAGRSLPSRC*SPSYASRSGSP
Trigger: TGGGCTACCTGATCGAGAGGCGTAAGAAGGGGAGCAACACCTGGACGGCAGTGAACGACCAGCCGGTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 72 bp CCATTTTCCTGGGGCTCTGGGCACAGCCTCCATCCTTaGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAA +
Preference number: 3 (lower is better)
Translates to: PFSWGSGHSLHP*DWLPGPVQVSE
Trigger: TTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCAGGAAAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
3UTR CCA 72 bp GGCAGACGCCAGCCCTATGGCAATCCTGAACCTCCATaGGGCCTTGTGGGGGATCAGGCTTGTCTTGCTGGC +
Preference number: 3 (lower is better)
Translates to: GRRQPYGNPEPP*GLVGDQACLAG
Trigger: GCCAGCAAGACAAGCCTGATCCCCCACAAGGCCCCATGGAGGTTCAGGATTGCCATAGGGCTGGCGTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 72 bp GTGACTGGCACGGTGCCCACATGGCACGGGAGCCACTaGAGACTGTCTGAGCTGCACAGCTCCACCACATAC +
Preference number: 3 (lower is better)
Translates to: VTGTVPTWHGSH*RLSELHSSTTY
Trigger: GTATGTGGTGGAGCTGTGCAGCTCAGACAGTCTCCAGTGGCTCCCGTGCCATGTGGGCACCGTGCCAGTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CAA 90 bp GGAGCCACTGGAGACTGTCTGAGCTGCACAGCTCCACCACATACCCCTGGGCTTAACCTCCATGGGGCCTaGTGGGGGATCAGGCTTGTC +
Preference number: 3 (lower is better)
Translates to: GATGDCLSCTAPPHTPGLNLHGA*WGIRLV
Trigger: GACAAGCCTGATCCCCCACAAGGCCCCATGGAGGTT...AAGCCCAGGGGTATGTGGTGGAGCTGTGCAGCTCAGACAGTCTCCAGTGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 72 bp GGTCACAGCCCGCACTCGGAAGGTATACTTCCTGCCTaGCTCCACATGGGCATCCGTGAAGGTGGTGCTGTC +
Preference number: 3 (lower is better)
Translates to: GHSPHSEGILPA*LHMGIREGGAV
Trigger: GACAGCACCACCTTCACGGATGCCCATGTGGAGCCAGGCAGGAAGTATACCTTCCGAGTGCGGGCTGTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CAA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCCCTCCATCCTTGGGATaGGCTTCCCGGGCCAGTGCA +
Preference number: 3 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFPPSLG*ASRASA
Trigger: TGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGG...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
3UTR-3UTR CAA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCCCTCCATCCTTGGGATaGGCTTCCCGGGCCAGTGCA +
Preference number: 3 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSPPSLG*ASRASA
Trigger: TGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGG...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
3UTR-3UTR CAA 90 bp AGTGATGCTGGTGTTCGATCTGTCTGTGACTTGGAGATTCCTCACCAGCCCAGGGCACAGCCTCCATCCTaGGGATTGGCTTCCCGGGCC +
Preference number: 3 (lower is better)
Translates to: SDAGVRSVCDLEIPHQPRAQPPS*GLASRA
Trigger: GGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGC...CCTGGGCTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGCATCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CAA 90 bp GCTGGTGTCCGAGGGTTTGCTGGCCCCCAGCTCATTCTTGGCCACCACCCTGAAACAGTCACACTTCTTTaGGGCAAGGGCAAGCCATCC +
Preference number: 3 (lower is better)
Translates to: AGVRGFAGPQLILGHHPETVTLL*GKGKPS
Trigger: GGATGGCTTGCCCTTGCCCAAAAGAAGTGTGACTGT...TTCAGGGTGGTGGCCAAGAATGAGCTGGGGGCCAGCAAACCCTCGGACACCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CAA 90 bp CACAGCTGTGACCCGGAACTCATACTGACAGCCCTGCCGCACGTCCGCCACCGTTTCGCTGTCATTCTGTaGAGTGACTTAGCTTGGAGC +
Preference number: 3 (lower is better)
Translates to: HSCDPELILTALPHVRHRFAVIL*SDLAWS
Trigger: GCTCCAAGCTAAGTCACTCAACAGAATGACAGCGAA...ACGGTGGCGGACGTGCGGCAGGGCTGTCAGTATGAGTTCCGGGTCACAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR GCA 72 bp GCTGGGTTCTATGACAATGAGGGTGGCAGTGCTGACTaGCTGGCCCAGCGTGTTCTCAGCCACAGCCTTGTA +
Preference number: 3 (lower is better)
Translates to: AGFYDNEGGSAD*LAQRVLSHSLV
Trigger: TACAAGGCTGTGGCTGAGAACACGCTGGGCCAGGCAGTCAGCACTGCCACCCTCATTGTCATAGAACCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CAA 90 bp AGGTCAGTGCTGTACACCGCGGGGTTTCCTTCCAGGCTGCGGTCATTCTTGAACGAGTCCACGAGGAACTaGGGACAGACAGTAACAGGC +
Preference number: 3 (lower is better)
Translates to: RSVLYTAGFPSRLRSFLNESTRN*GQTVTG
Trigger: GCCTGTTACTGTCTGTCCCAAGTTCCTCGTGGACTC...GTTCAAGAATGACCGCAGCCTGGAAGGAAACCCCGCGGTGTACAGCACTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR TCA 72 bp GTGAGGGTCCAGGAGGTTCGCTGTCATTCTGTTGAGTaGCTTAGCTTGGAGCCAGGAGGTGGAATGCCCTCC +
Preference number: 3 (lower is better)
Translates to: VRVQEVRCHSVE*LSLEPGGGMPS
Trigger: GGAGGGCATTCCACCTCCTGGCTCCAAGCTAAGTCACTCAACAGAATGACAGCGAACCTCCTGGACCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
3UTR GCA 72 bp ACGAGGAACTTGGGACAGACAGTAACAGGCATGGCTTaGACTAATGTGTCCAGGGCACTGGGCTGGCTCTGG +
Preference number: 3 (lower is better)
Translates to: TRNLGQTVTGMA*TNVSRALGWLW
Trigger: CCAGAGCCAGCCCAGTGCCCTGGACACATTAGTGCAAGCCATGCCTGTTACTGTCTGTCCCAAGTTCCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 72 bp CTCAGAGTGATGCTGGTGTTCGATCTGTCTGTGACTTaGAGATTCCTCACCAGCCCAGGGGGTCTCATGGGG +
Preference number: 3 (lower is better)
Translates to: LRVMLVFDLSVT*RFLTSPGGLMG
Trigger: CCCCATGAGACCCCCTGGGCTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGCATCACTCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR-3UTR CAA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGCCTCCATCCTTGGGATaGGCTTCCCGGGCCAGTGCA +
Preference number: 3 (lower is better)
Translates to: SGSPEAKKKETHMVRVQEPPSLG*ASRASA
Trigger: TGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGG...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
3UTR CCA 72 bp CCACTGTCTGAGAGTCCAGCCACAGGGATCAGAAGCTaGGTGAGGCCATCCTTAGTGACAGTCACACTTCTT +
Preference number: 3 (lower is better)
Translates to: PLSESPATGIRS*VRPSLVTVTLL
Trigger: AAGAAGTGTGACTGTCACTAAGGATGGCCTCACCCAGCTTCTGATCCCTGTGGCTGGACTCTCAGACAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
3UTR CCA 72 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTaGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCC +
Preference number: 3 (lower is better)
Translates to: NEETHRKHLLHP*NLLNPGGGGCP
Trigger: GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
3UTR TCA 72 bp GATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTaGGGGTCCAGGAGGTTCGCTGTCATTCTGTTGAGT +
Preference number: 3 (lower is better)
Translates to: DLLKRRRKKPIW*GSRRFAVILLS
Trigger: ACTCAACAGAATGACAGCGAACCTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp CCCTGGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGGGCCTTGGGGAGAGCCGGCCGGGGCGAGCCCTaGACGGCACAGCTCATGCAG +
Preference number: 4 (lower is better)
Translates to: PWLEADRMAGAEGALGRAGRGEP*TAQLMQ
Trigger: CTGCATGAGCTGTGCCGTGCAGGGCTCGCCCCGGCC...GGCTCTCCCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCCAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CCCTGGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGGGCCTTGGGGAGAGCCGCGCGGAAGGGGCCTTaGGGAGAGCCTCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: PWLEADRMAGAEGALGRAARKGP*GEPQEP
Trigger: TGGCTCCTGAGGCTCTCCCCAAGGCCCCTTCCGCGC...GGCTCTCCCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCCAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp CCCTGGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGGGCCTTGGGGAGAGCCAGGCTCTCCGGGACCTaGGGGAGCCACAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: PWLEADRMAGAEGALGRARLSGT*GSHSCD
Trigger: GTCACAGCTGTGGCTCCCTCAGGTCCCGGAGAGCCT...GGCTCTCCCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp GCAGGTGGGACCGCAGGCCCACCAGGAACCGGGGCTTCTGGCTCAGGTCGGGCTGTGAACCTGTCGCGCTaGCGGGGGATGCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: AGGTAGPPGTGASGSGRAVNLSR*RGMHQG
Trigger: GCCCTGGTGCATCCCCCGGCAGCGCGACAGGTTCAC...AGCCCGACCTGAGCCAGAAGCCCCGGTTCCTGGTGGGCCTGCGGTCCCACCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp GCAGGTGGGACCGCAGGCCCACCAGGAACCGGGGCTTCTGGCTCAGGTCGGGCTACGGAGCCTTCACTGTaGACCTGTCGCGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: AGGTAGPPGTGASGSGRATEPSL*TCRAAG
Trigger: CCCGGCAGCGCGACAGGTTCACAGTGAAGGCTCCGT...AGCCCGACCTGAGCCAGAAGCCCCGGTTCCTGGTGGGCCTGCGGTCCCACCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp GGGCCCCGAGGTGCTGTCCATGTCAGTGTGATGCCCTGGCTGGAGGCCGACAGGCGGTCGGCTGCCTCGTaGCAGGGACCGTGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: GPRGAVHVSVMPWLEADRRSAAS*QGPCAE
Trigger: CTCAGCGCACGGTCCCTGGCACGAGGCAGCCGACCG...CCTGTCGGCCTCCAGCCAGGGCATCACACTGACATGGACAGCACCTCGGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp TGTGATGCCCTGGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGGGCCTTGGGCTCACCACCAGCCGGTaGGTCAGCCCGTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: CDALAGGRQDGWRGRGLGLTTSR*VSPSGD
Trigger: GTCCCCTGACGGGCTGACCCACCGGCTGGTGGTGAG...CCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCCAGGGCATCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CTCGGCCGTCACCGTCCCAGGCACGTTCTCCTGCAGGTGGATGGGCCCAGGGGCAGGCCCTGGGAGAAGTaGCCCATGGGGCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LGRHRPRHVLLQVDGPRGRPWEK*PMGPWA
Trigger: TGCCCAAGGCCCCATGGGCCACTTCTCCCAGGGCCT...GCCCCTGGGCCCATCCACCTGCAGGAGAACGTGCCTGGGACGGTGACGGCCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp AGCGGTTGGTGTGGATGCGGTCGGCTGCCTCGTGCCAGGGACCGTGCGCTGAGGTTGAACCAGGTGACGTaGGGCCGGGGCGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SGWCGCGRLPRARDRALRLNQVT*GRGEPC
Trigger: GCAGGGCTCGCCCCGGCCCCACGTCACCTGGTTCAA...CCTCAGCGCACGGTCCCTGGCACGAGGCAGCCGACCGCATCCACACCAACCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp GGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGGGCCTTGGGGAGAGCCTCAGCCCTGGGTGTACAGCTaGCCTCCCGCTTCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: GWRPTGWLARKGPWGEPQPWVYS*PPASCL
Trigger: CAGACAGGAAGCGGGAGGTCAGCTGTACACCCAGGG...CTGAGGCTCTCCCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp CCCTGGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGGGCCTTGGGGAGAGCCCCACCAGCTGCCAGATaGTCACTCCAGGGATGTGGG +
Preference number: 4 (lower is better)
Translates to: PWLEADRMAGAEGALGRAPPAAR*SLQGCG
Trigger: CCCACATCCCTGGAGTGAGCATCTGGCAGCTGGTGG...GGCTCTCCCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CTCGGCCGTCACCGTCCCAGGCACGTTCTCCTGCAGGTGGATGGGCCCAGGGGCCTCTCAGGCACCGGCTaGTCGTTCACTGCCGTCCAG +
Preference number: 4 (lower is better)
Translates to: LGRHRPRHVLLQVDGPRGLSGTG*SFTAVQ
Trigger: CTGGACGGCAGTGAACGACCAGCCGGTGCCTGAGAG...GCCCCTGGGCCCATCCACCTGCAGGAGAACGTGCCTGGGACGGTGACGGCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp GGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGGGCCTTGGGGAGAGCCTCAGTGCAGCGGGACATCCTaGGCCTCGTCAGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: GWRPTGWLARKGPWGEPQCSGTS*ASSGEG
Trigger: ACCCTCTCCTGACGAGGCCCAGGATGTCCCGCTGCA...CTGAGGCTCTCCCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp CCCACTCGGCCGTCACCGTCCCAGGCACGTTCTCCTGCAGGTGGATGGGCCCAGCCACATGGGCATCCGTaGAGGTGGTGCTGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: PTRPSPSQARSPAGGWAQPHGHP*RWCCQR
Trigger: CCGCTGACAGCACCACCTTCACGGATGCCCATGTGG...CTGGGCCCATCCACCTGCAGGAGAACGTGCCTGGGACGGTGACGGCCGAGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp GTGAAGCGGTTGGTGTGGATGCGGTCGGCTGCCTCGTGCCAGGGACCGTGCGCTGCGCTGAGGAGCGTGTaGACACCGCGTAGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: VKRLVWMRSAASCQGPCAALRSV*TPRSAA
Trigger: CGCTGCACTACGCGGTGTTCACACGCTCCTCAGCGC...AGCGCACGGTCCCTGGCACGAGGCAGCCGACCGCATCCACACCAACCGCTTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp GGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGGGCCTTGGGGAGAGCCTCAGTCGGCTTCCCAGCCTTaGCCACCAGTGGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: GWRPTGWLARKGPWGEPQSASQP*PPVALS
Trigger: TGAGAGAGCCACTGGTGGTCAAGGCTGGGAAGCCGA...CTGAGGCTCTCCCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGCGGCCTCCCCCGGCTaGACTTCCATGTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQAASPG*TSMSAR
Trigger: CCTGGCTGACATGGAAGTGCAGCCGGGGGAGGCCGC...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGCCAGGATGTGGGCGCTaGCGGGGCCCCGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVPGCGR*RGPEVL
Trigger: CAGCACCTCGGGGCCCCGGCAGCGCCCACATCCTGG...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TCCCGAGCAAAGACAGCATCCGATGGAGGTCCAGGCTCTCCGGGACCTGAGGGACCAGGATGTGGGCGCTaGCGGGGCCCCGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SRAKTASDGGPGSPGPEGPGCGR*RGPEVL
Trigger: CAGCACCTCGGGGCCCCGGCAGCGCCCACATCCTGG...TCCCTCAGGTCCCGGAGAGCCTGGACCTCCATCGGATGCTGTCTTTGCTCGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGCCGGGGCGAGCCCTaGACGGCACAGCTCATGCAG +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVGRGEP*TAQLMQ
Trigger: CTGCATGAGCTGTGCCGTGCAGGGCTCGCCCCGGCC...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp GCCACCGTCCACCTCCTCTCAGGCACCGGCTGGTCGTTCACTGCCGTCCAGGTGCCACCAGCCAGGCGCTaGAAGTGTAGAGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: ATVHLLSGTGWSFTAVQVPPARR*KCRARC
Trigger: GCACCGGGCTCTACACTTCCAGCGCCTGGCTGGTGG...CACCTGGACGGCAGTGAACGACCAGCCGGTGCCTGAGAGGAGGTGGACGGTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp AGCGGTTGGTGTGGATGCGGTCGGCTGCCTCGTGCCAGGGACCGTGCGCTGAGGGGGAGAAGTGGCCCATaGGGCCTTGGGCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: SGWCGCGRLPRARDRALRGRSGP*GLGHPW
Trigger: CCAAGGATGCCCAAGGCCCCATGGGCCACTTCTCCC...CCTCAGCGCACGGTCCCTGGCACGAGGCAGCCGACCGCATCCACACCAACCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CACCACCCTGAAGTGGTATTCGTGGCCGGGGAGGATGCCCAGGAGGGTGAAGCGGCCCCCATTGTCCCTTaGGGGCCGCCAGCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: HHPEVVFVAGEDAQEGEAAPIVP*GPPAEA
Trigger: TGCCTCCGCTGGCGGCCCCCAAGGGACAATGGGGGC...CGCTTCACCCTCCTGGGCATCCTCCCCGGCCACGAATACCACTTCAGGGTGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CTCGGCCGTCACCGTCCCAGGCACGTTCTCCTGCAGGTGGATGGGCCCAGGGGCCTGCCTGGCTCCACATaGGCATCCGTGAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LGRHRPRHVLLQVDGPRGLPGST*ASVKVV
Trigger: CACCACCTTCACGGATGCCCATGTGGAGCCAGGCAG...GCCCCTGGGCCCATCCACCTGCAGGAGAACGTGCCTGGGACGGTGACGGCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CACCACCCTGAAGTGGTATTCGTGGCCGGGGAGGATGCCCAGGAGGGTGAAGCGGGCCGACAGGATGGCTaGCGCGGAAGGGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: HHPEVVFVAGEDAQEGEAGRQDG*RGRGLG
Trigger: CCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCC...CGCTTCACCCTCCTGGGCATCCTCCCCGGCCACGAATACCACTTCAGGGTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp GGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGGGCCTTGGGGAGAGCCTCAGTGGCACGGGAGCCACTaGAGACTGTCTGAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GWRPTGWLARKGPWGEPQWHGSH*RLSELH
Trigger: GTGCAGCTCAGACAGTCTCCAGTGGCTCCCGTGCCA...CTGAGGCTCTCCCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp GGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGGGCCTTGGGGAGAGCCTCAGCGTGTAGGTGGTGACTaGCACGGTGCCCACATGGCA +
Preference number: 4 (lower is better)
Translates to: GWRPTGWLARKGPWGEPQRVGGD*HGAHMA
Trigger: TGCCATGTGGGCACCGTGCCAGTCACCACCTACACG...CTGAGGCTCTCCCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCCAGCACTCGCAGCCCTaGGGCAGCAGGTGGGACCGC +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVQHSQP*GSRWDR
Trigger: GCGGTCCCACCTGCTGCCCCAGGGCTGCGAGTGCTG...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGCCCCCAGGGCCTCTaGGGCTCTGAAGCCCCCATA +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVGPQGL*GSEAPI
Trigger: TATGGGGGCTTCAGAGCCTCAGAGGCCCTGGGGGCC...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp GCAGGTGGGACCGCAGGCCCACCAGGAACCGGGGCTTCTGGCTCAGGTCGGGCTTACCCAGCAACTTCCTaGGGGCCCAGTGTATTGGGG +
Preference number: 4 (lower is better)
Translates to: AGGTAGPPGTGASGSGRAYPATS*GPSVLG
Trigger: CCCCAATACACTGGGCCCTCAGGAAGTTGCTGGGTA...AGCCCGACCTGAGCCAGAAGCCCCGGTTCCTGGTGGGCCTGCGGTCCCACCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp GGGCCCCGAGGTGCTGTCCATGTCAGTGTGATGCCCTGGCTGGAGGCCGACAGGGGGTGGAGTAGCCGGTaGCGGAAATGCCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GPRGAVHVSVMPWLEADRGWSSR*RKCQAA
Trigger: TGCAGCCTGGCATTTCCGGCACCGGCTACTCCACCC...CCTGTCGGCCTCCAGCCAGGGCATCACACTGACATGGACAGCACCTCGGGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp GGCGCTGCCGGGGCCCCGAGGTGCTGTCCATGTCAGTGTGATGCCCTGGCTGGATCAGCCAAGTGCTCCTaGCAGCCTGCCGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GAAGAPRCCPCQCDALAGSAKCS*QPAVSP
Trigger: TGGAGAGACGGCAGGCTGGCAGGAGCACTTGGCTGA...TCCAGCCAGGGCATCACACTGACATGGACAGCACCTCGGGGCCCCGGCAGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCCAGGATGTGGGCGCTaGCGGGGCCCCGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDPGCGR*RGPEVL
Trigger: CAGCACCTCGGGGCCCCGGCAGCGCCCACATCCTGG...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCACGGTCGGCTGCCTCGTaGCAGGGACCGTGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPRSAAS*QGPCAE
Trigger: CTCAGCGCACGGTCCCTGGCACGAGGCAGCCGACCG...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TCCAGGGCCTCGCCAGCCCCCTCTGAGGTCACAGCCCGCACTCGGAAGGTATACAGCGGTTGGTGTGGATaGGGTCGGCTGCCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: SRASPAPSEVTARTRKVYSGWCG*GRLPRA
Trigger: GGCACGAGGCAGCCGACCGCATCCACACCAACCGCT...GTATACCTTCCGAGTGCGGGCTGTGACCTCAGAGGGGGCTGGCGAGGCCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp CATGTCAGTGTGATGCCCTGGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGGGCACGGCACAGCTCATaGAGCACTCGCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: HVSVMPWLEADRMAGAEGARHSS*STRSPG
Trigger: CCCAGGGCTGCGAGTGCTGCATGAGCTGTGCCGTGC...CCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCCAGGGCATCACACTGACATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGCGCGGAAGGGGCCTTaGGGAGAGCCTCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVARKGP*GEPQEP
Trigger: TGGCTCCTGAGGCTCTCCCCAAGGCCCCTTCCGCGC...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCTGGAGGCCGACAGGATaGCTGGCGCGGAAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVWRPTG*LARKGP
Trigger: AGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCA...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CACCACCCTGAAGTGGTATTCGTGGCCGGGGAGGATGCCCAGGAGGGTGAAGCGAGGAACCGGGGCTTCTaGCTCAGGTCGGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: HHPEVVFVAGEDAQEGEARNRGF*LRSGSR
Trigger: CCGGGAGCCCGACCTGAGCCAGAAGCCCCGGTTCCT...CGCTTCACCCTCCTGGGCATCCTCCCCGGCCACGAATACCACTTCAGGGTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGCCGGCTTCCCAGCCTTaGCCACCAGTGGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQPASQP*PPVALS
Trigger: TGAGAGAGCCACTGGTGGTCAAGGCTGGGAAGCCGG...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp TCTGTGACTTGGAGATTCCTCACCAGCCCAGGGGGTCTCATGGGGTCCCGAGCACTCGCCAGCCCCCTCTaGGGTCACAGCCCGCACTCG +
Preference number: 4 (lower is better)
Translates to: SVTWRFLTSPGGLMGSRALASPL*GHSPHS
Trigger: CGAGTGCGGGCTGTGACCTCAGAGGGGGCTGGCGAG...TGCTCGGGACCCCATGAGACCCCCTGGGCTGGTGAGGAATCTCCAAGTCACAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGACCCGGAACTCATACTaGCAGCCCTGCCGCACGTCC +
Preference number: 4 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQTRNSY*QPCRTS
Trigger: GGACGTGCGGCAGGGCTGTCAGTATGAGTTCCGGGT...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCCCAGGGACCGTGCGCTaGGGAGCGTGTGAACACCGC +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPPGTVR*GACEHR
Trigger: GCGGTGTTCACACGCTCCTCAGCGCACGGTCCCTGG...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp GCTGGTGTCCGAGGGTTTGCTGGCCCCCAGCTCATTCTTGGCCACCACCCTGAACCAGGGACCGTGCGCTaGGGAGCGTGTGAACACCGC +
Preference number: 4 (lower is better)
Translates to: AGVRGFAGPQLILGHHPEPGTVR*GACEHR
Trigger: GCGGTGTTCACACGCTCCTCAGCGCACGGTCCCTGG...TTCAGGGTGGTGGCCAAGAATGAGCTGGGGGCCAGCAAACCCTCGGACACCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGGATGCCCAGGAGGGTaGAGCGGTTGGTGTGGATGC +
Preference number: 4 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQGCPGG*SGWCGC
Trigger: GCATCCACACCAACCGCTTCACCCTCCTGGGCATCC...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGATACGCTGGGGATGGTaGGGGAGCACACGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQIRWGW*GSTRPA
Trigger: TGCTGGGCGTGTGCTCCCTCACCATCCCCAGCGTAT...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCACCCAGTCCTCCAGCCTaGAGCCGACTGGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPPSPPA*SRLDPA
Trigger: GGCTGGGTCCAGTCGGCTTCAGGCTGGAGGACTGGG...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCCCTGAGACCTGCTCCTaGGTGAGCCAGGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVPETCS*VSQASC
Trigger: GCAGGAGGCCTGGCTCACTCAGGAGCAGGTCTCAGG...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGCTCCTGCTACCAAGGTaGCCAGGGGGCTCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVLLLPR*PGGSRL
Trigger: GAGCCGGGAGCCCCCTGGTCACCTTGGTAGCAGGAG...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGGCGGCCTCCCCCGGCTaGACTTCCATGTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVAASPG*TSMSAR
Trigger: CCTGGCTGACATGGAAGTGCAGCCGGGGGAGGCCGC...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TCCAGGGCCTCGCCAGCCCCCTCTGAGGTCACAGCCCGCACTCGGAAGGTATACCGGCTGGTCGTTCACTaGCGTCCAGGTGTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SRASPAPSEVTARTRKVYRLVVH*RPGVAP
Trigger: GGGAGCAACACCTGGACGGCAGTGAACGACCAGCCG...GTATACCTTCCGAGTGCGGGCTGTGACCTCAGAGGGGGCTGGCGAGGCCCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCGGTCGGCTGCCTCGTaGCAGGGACCGTGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDRSAAS*QGPCAE
Trigger: CTCAGCGCACGGTCCCTGGCACGAGGCAGCCGACCG...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCAGGCGCTCCGGAGCCATaGCTGTACCCACCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPGAPEP*LYPPPS
Trigger: GGAAGGGGGTGGGTACAGGCATGGCTCCGGAGCGCC...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp CCCACTCGGCCGTCACCGTCCCAGGCACGTTCTCCTGCAGGTGGATGGGCCCAGTGGCCCATGGGGCCTTaGGCATCCTTGGAGAAACTG +
Preference number: 4 (lower is better)
Translates to: PTRPSPSQARSPAGGWAQWPMGP*ASLEKL
Trigger: CAGTTTCTCCAAGGATGCCCAAGGCCCCATGGGCCA...CTGGGCCCATCCACCTGCAGGAGAACGTGCCTGGGACGGTGACGGCCGAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CACCACCCTGAAGTGGTATTCGTGGCCGGGGAGGATGCCCAGGAGGGTGAAGCGCCTGGACGGTCAGGGTaGCCTCGCTCTGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: HHPEVVFVAGEDAQEGEAPGRSG*PRSAGH
Trigger: GTGACCAGCAGAGCGAGGCCACCCTGACCGTCCAGG...CGCTTCACCCTCCTGGGCATCCTCCCCGGCCACGAATACCACTTCAGGGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CCCTGGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGGGCCTTGGGGAGAGCCACAGGGATCAGAAGCTaGGTGAGGCCATCCTTAGTG +
Preference number: 4 (lower is better)
Translates to: PWLEADRMAGAEGALGRATGIRS*VRPSLV
Trigger: CACTAAGGATGGCCTCACCCAGCTTCTGATCCCTGT...GGCTCTCCCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CCCACTCGGCCGTCACCGTCCCAGGCACGTTCTCCTGCAGGTGGATGGGCCCAGTGTCCGAGGGTTTGCTaGCCCCCAGCTCATTCTTGG +
Preference number: 4 (lower is better)
Translates to: PTRPSPSQARSPAGGWAQCPRVC*PPAHSW
Trigger: CCAAGAATGAGCTGGGGGCCAGCAAACCCTCGGACA...CTGGGCCCATCCACCTGCAGGAGAACGTGCCTGGGACGGTGACGGCCGAGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCAGCACTCGCAGCCCTaGGGCAGCAGGTGGGACCGC +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDQHSQP*GSRWDR
Trigger: GCGGTCCCACCTGCTGCCCCAGGGCTGCGAGTGCTG...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp GTGAAGCGGTTGGTGTGGATGCGGTCGGCTGCCTCGTGCCAGGGACCGTGCGCTCACAGCCTCCATCCTTaGGATTGGCTTCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: VKRLVWMRSAASCQGPCAHSLHP*DWLPGP
Trigger: TGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG...AGCGCACGGTCCCTGGCACGAGGCAGCCGACCGCATCCACACCAACCGCTTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCCCACATGGGCATCCGTaGAGGTGGTGCTGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVPHGHP*RWCCQR
Trigger: CCGCTGACAGCACCACCTTCACGGATGCCCATGTGG...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCACTCGCCAGCCCCCTCTaGGGTCACAGCCCGCACTCG +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASLASPL*GHSPHS
Trigger: CGAGTGCGGGCTGTGACCTCAGAGGGGGCTGGCGAG...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CACAGCTGTGACCCGGAACTCATACTGACAGCCCTGCCGCACGTCCGCCACCGTACCCGGAACTCATACTaGCAGCCCTGCCGCACGTCC +
Preference number: 4 (lower is better)
Translates to: HSCDPELILTALPHVRHRTRNSY*QPCRTS
Trigger: GGACGTGCGGCAGGGCTGTCAGTATGAGTTCCGGGT...ACGGTGGCGGACGTGCGGCAGGGCTGTCAGTATGAGTTCCGGGTCACAGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp TCCAGGGCCTCGCCAGCCCCCTCTGAGGTCACAGCCCGCACTCGGAAGGTATACGGCATGCTGCCACCCTaGTACGGAAGCTGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: SRASPAPSEVTARTRKVYGMLPP*YGSCGQ
Trigger: TTGCCCACAGCTTCCGTATCAGGGTGGCAGCATGCC...GTATACCTTCCGAGTGCGGGCTGTGACCTCAGAGGGGGCTGGCGAGGCCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCAGCGCTGAGGAGCGTGTaGACACCGCGTAGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPALRSV*TPRSAA
Trigger: CGCTGCACTACGCGGTGTTCACACGCTCCTCAGCGC...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCGCGCTGAGGAGCGTGTaGACACCGCGTAGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPALRSV*TPRSAA
Trigger: CGCTGCACTACGCGGTGTTCACACGCTCCTCAGCGC...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTGGATGCCCAGGAGGGTaGAGCGGTTGGTGTGGATGC +
Preference number: 4 (lower is better)
Translates to: ALGTASILGIGFPGQCRCGCPGG*SGWCGC
Trigger: GCATCCACACCAACCGCTTCACCCTCCTGGGCATCC...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCACGGAGCCTTCACTGTaGACCTGTCGCGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPTEPSL*TCRAAG
Trigger: CCCGGCAGCGCGACAGGTTCACAGTGAAGGCTCCGT...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGAAGCGGCCCCATTGTaGGGTGCGAGTGACTCAGGG +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVEAAPL*GASDSG
Trigger: CCCTGAGTCACTCGCACCTCACAATGGGGCCGCTTC...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp GGGCCCCGAGGTGCTGTCCATGTCAGTGTGATGCCCTGGCTGGAGGCCGACAGGTTCCCCGTTTCCAGCTaGTGCTTGCTGAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GPRGAVHVSVMPWLEADRFPVSS*CLLRLW
Trigger: CCAGAGCCTCAGCAAGCAGCAGCTGGAAACGGGGAA...CCTGTCGGCCTCCAGCCAGGGCATCACACTGACATGGACAGCACCTCGGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGAGAGTGAGCTCGGCCTaGACAGAGCCTCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQRVSSA*TEPPSL
Trigger: GAGTGAGGGAGGCTCTGTGCAGGCCGAGCTCACTCT...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCCCCTGCTCCTCACAGTaGGTCTCCGCCAGTGGGACC +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPPCSSQ*VSASGT
Trigger: GGTCCCACTGGCGGAGACCCACTGTGAGGAGCAGGG...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCCCACCAGCCAGGCGCTaGAAGTGTAGAGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPPPARR*KCRARC
Trigger: GCACCGGGCTCTACACTTCCAGCGCCTGGCTGGTGG...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTGGGAGAAGTGGCCCATaGGGCCTTGGGCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: ALGTASILGIGFPGQCRCGRSGP*GLGHPW
Trigger: CCAAGGATGCCCAAGGCCCCATGGGCCACTTCTCCC...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCAGGCCCTGGGAGAAGTaGCCCATGGGGCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPRPWEK*PMGPWA
Trigger: TGCCCAAGGCCCCATGGGCCACTTCTCCCAGGGCCT...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACGGGTACAGGAGAGTGTaGCGGCCTCCCCCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDGYRRV*RPPPAA
Trigger: TGCAGCCGGGGGAGGCCGCCACACTCTCCTGTACCC...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCACCTGGACGGTCAGGGTaGCCTCGCTCTGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPPGRSG*PRSAGH
Trigger: GTGACCAGCAGAGCGAGGCCACCCTGACCGTCCAGG...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAGCCCCCATTGTCCCTTaGGGGCCGCCAGCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASAPIVP*GPPAEA
Trigger: TGCCTCCGCTGGCGGCCCCCAAGGGACAATGGGGGC...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TCTGTGACTTGGAGATTCCTCACCAGCCCAGGGGGTCTCATGGGGTCCCGAGCATGGAGGCCGACAGGATaGCTGGCGCGGAAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SVTWRFLTSPGGLMGSRAWRPTG*LARKGP
Trigger: AGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCA...TGCTCGGGACCCCATGAGACCCCCTGGGCTGGTGAGGAATCTCCAAGTCACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCAGGCACGGTGCCCACATaGCACGGGAGCCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPGTVPT*HGSHWR
Trigger: TCTCCAGTGGCTCCCGTGCCATGTGGGCACCGTGCC...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp GGGCCCCGAGGTGCTGTCCATGTCAGTGTGATGCCCTGGCTGGAGGCCGACAGGCTGATACGGAAGCTGTaGGCAACCTCCTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GPRGAVHVSVMPWLEADRLIRKL*ATSFPC
Trigger: GCAGGGGAAGGAGGTTGCCCACAGCTTCCGTATCAG...CCTGTCGGCCTCCAGCCAGGGCATCACACTGACATGGACAGCACCTCGGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGCTGAAGTGGTATTCGTaGCCGGGGAGGATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQLKWYS*PGRMPR
Trigger: CCTGGGCATCCTCCCCGGCCACGAATACCACTTCAG...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCTGCACCAGGGCTGGCTaGTGTCCGAGGGTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVCTRAG*CPRVCW
Trigger: CCAGCAAACCCTCGGACACCAGCCAGCCCTGGTGCA...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGCACAGCCTCCATCCTTaGGATTGGCTTCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQHSLHP*DWLPGP
Trigger: TGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TGTGATGCCCTGGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGGGCCTTGGGATTTTCCTGGGGCTCTaGGCACAGCCTCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: CDALAGGRQDGWRGRGLGIFLGL*AQPPSL
Trigger: CAAGGATGGAGGCTGTGCCCAGAGCCCCAGGAAAAT...CCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCCAGGGCATCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCACACCTTCGCAGCCTCTaGGGTCTCCTGGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPHLRSL*GLLGLQ
Trigger: CTGGAGGCCCAGGAGACCCCAGAGGCTGCGAAGGTG...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCGAGACCCTGGTCCCATaGCTCCTGGACCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPETLVP*LLDPQS
Trigger: GCTCTGGGGGTCCAGGAGCCATGGGACCAGGGTCTC...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGAGAACCGGAAGCTCTaGAGCCTGCGGGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVENRKL*SLRAAS
Trigger: GGAAGCAGCCCGCAGGCTCCAGAGCTTCCGGTTCTC...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
3UTR CAA 72 bp CCCATTTTCCTGGGGCTCTGGGCACAGCCTCCATCCTaGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGA +
Preference number: 4 (lower is better)
Translates to: PIFLGLWAQPPS*GLASRASAGVG
Trigger: TCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCAGGAAAATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
3UTR CAA 72 bp CTGGTGTCCGAGGGTTTGCTGGCCCCCAGCTCATTCTaGGCCACCACCCTGAAGTGGTATTCGTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LVSEGLLAPSSF*ATTLKWYSWPG
Trigger: CCCCGGCCACGAATACCACTTCAGGGTGGTGGCCAAGAATGAGCTGGGGGCCAGCAAACCCTCGGACACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGCCCTGGGTGTACAGCTaGCCTCCCGCTTCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVPWVYS*PPASCL
Trigger: CAGACAGGAAGCGGGAGGTCAGCTGTACACCCAGGG...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCCTGGCAGAGCCGAGGTaGCGGGCTTCTGCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVLAEPR*RASAQS
Trigger: ACTTTGAGCAGAAGCCCGTCACCTCGGCTCTGCCAG...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACAGGCTCTCCGGGACCTaGGGGAGCCACAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDRLSGT*GSHSCD
Trigger: GTCACAGCTGTGGCTCCCTCAGGTCCCGGAGAGCCT...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCTGGCCGTGTAGGTGGTaGCTGGCACGGTGCCCACAT +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPWPCRW*LARCPH
Trigger: ATGTGGGCACCGTGCCAGTCACCACCTACACGGCCA...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp TCCCGAGCAAAGACAGCATCCGATGGAGGTCCAGGCTCTCCGGGACCTGAGGGAGGATGCCCAGGAGGGTaGAGCGGTTGGTGTGGATGC +
Preference number: 4 (lower is better)
Translates to: SRAKTASDGGPGSPGPEGGCPGG*SGWCGC
Trigger: GCATCCACACCAACCGCTTCACCCTCCTGGGCATCC...TCCCTCAGGTCCCGGAGAGCCTGGACCTCCATCGGATGCTGTCTTTGCTCGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp CACAGCTGTGACCCGGAACTCATACTGACAGCCCTGCCGCACGTCCGCCACCGTTCTTGGCCACCACCCTaGAGTGGTATTCGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: HSCDPELILTALPHVRHRSWPPP*SGIRGR
Trigger: CCGGCCACGAATACCACTTCAGGGTGGTGGCCAAGA...ACGGTGGCGGACGTGCGGCAGGGCTGTCAGTATGAGTTCCGGGTCACAGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCAATACGCTGGGGATGGTaGGGGAGCACACGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPIRWGW*GSTRPA
Trigger: TGCTGGGCGTGTGCTCCCTCACCATCCCCAGCGTAT...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGTTCCCCGTTTCCAGCTaGTGCTTGCTGAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQFPVSS*CLLRLW
Trigger: CCAGAGCCTCAGCAAGCAGCAGCTGGAAACGGGGAA...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCCCACCAGCTGCCAGATaGTCACTCCAGGGATGTGGG +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVPPAAR*SLQGCG
Trigger: CCCACATCCCTGGAGTGAGCATCTGGCAGCTGGTGG...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGAGGTGACGGGCTTCTaGTCAAAGTCCGGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVEVTGF*SKSGVL
Trigger: CAGCACGCCGGACTTTGAGCAGAAGCCCGTCACCTC...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CATGTCAGTGTGATGCCCTGGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGGTCACCTTTGGAGTTCTaGCAACGCACCTCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: HVSVMPWLEADRMAGAEGSPLEF*QRTSGL
Trigger: CAGGCCCGAGGTGCGTTGGCAGAACTCCAAAGGTGA...CCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCCAGGGCATCACACTGACATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp CCCTGGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGGGCCTTGGGGAGAGCCGGTGTTGATGTACTGTaGCATCTTGTCCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: PWLEADRMAGAEGALGRAGVDVL*HLVLLF
Trigger: GAACAGGAGGACAAGATGGCACAGTACATCAACACC...GGCTCTCCCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCGGGTGGAGTAGCCGGTaGCGGAAATGCCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPGWSSR*RKCQAA
Trigger: TGCAGCCTGGCATTTCCGGCACCGGCTACTCCACCC...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGGGGTGGAGTAGCCGGTaGCGGAAATGCCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVGWSSR*RKCQAA
Trigger: TGCAGCCTGGCATTTCCGGCACCGGCTACTCCACCC...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCTCAGCCAAGTGCTCCTaGCAGCCTGCCGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVSAKCS*QPAVSP
Trigger: TGGAGAGACGGCAGGCTGGCAGGAGCACTTGGCTGA...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGCTGCCGTCCAGGTGTTaGTCCCCTTCTTACGCCTCT +
Preference number: 4 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQLPSRC*SPSYAS
Trigger: AGAGGCGTAAGAAGGGGAGCAACACCTGGACGGCAG...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCGTGGATGCGGTCGGCTaGCTCGTGCCAGGGACCGTG +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPVDAVG*LVPGTV
Trigger: CACGGTCCCTGGCACGAGGCAGCCGACCGCATCCAC...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAGTGAACCTGTCGCGCTaGCGGGGGATGCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASVNLSR*RGMHQG
Trigger: GCCCTGGTGCATCCCCCGGCAGCGCGACAGGTTCAC...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACGCACGGCACAGCTCATaGAGCACTCGCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDARHSS*STRSPG
Trigger: CCCAGGGCTGCGAGTGCTGCATGAGCTGTGCCGTGC...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGGGTGGCAGTGCTGACTaGCTGGCCCAGCGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVGGSAD*LAQRVL
Trigger: GAGAACACGCTGGGCCAGGCAGTCAGCACTGCCACC...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCCCTGCTCCTCACAGTaGGTCTCCGCCAGTGGGACC +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDPCSSQ*VSASGT
Trigger: GGTCCCACTGGCGGAGACCCACTGTGAGGAGCAGGG...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp AGCGGTTGGTGTGGATGCGGTCGGCTGCCTCGTGCCAGGGACCGTGCGCTGAGGCTTCATATTTGTCACTaGGGTGGAGTAGCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: SGWCGCGRLPRARDRALRLHICH*GGVAGA
Trigger: GGCACCGGCTACTCCACCCCAGTGACAAATATGAAG...CCTCAGCGCACGGTCCCTGGCACGAGGCAGCCGACCGCATCCACACCAACCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCCTCACCACCAGCCGGTaGGTCAGCCCGTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPLTTSR*VSPSGD
Trigger: GTCCCCTGACGGGCTGACCCACCGGCTGGTGGTGAG...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCCACCAGCCAGGCGCTaGAAGTGTAGAGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDPPARR*KCRARC
Trigger: GCACCGGGCTCTACACTTCCAGCGCCTGGCTGGTGG...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CGGTGCCCACATGGCACGGGAGCCACTGGAGACTGTCTGAGCTGCACAGCTCCAGTGTACCTCCCAGCTTaGGTCCCCTGCACATGCGTG +
Preference number: 4 (lower is better)
Translates to: RCPHGTGATGDCLSCTAPVYLPA*VPCTCV
Trigger: CACGCATGTGCAGGGGACCCAAGCTGGGAGGTACAC...TGGAGCTGTGCAGCTCAGACAGTCTCCAGTGGCTCCCGTGCCATGTGGGCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGGCCTCGCTCTGCTaGTCACCAGCTACAAAGGTG +
Preference number: 4 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQVASLC*SPATKV
Trigger: CACCTTTGTAGCTGGTGACCAGCAGAGCGAGGCCAC...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCCTGGACGGTCAGGGTaGCCTCGCTCTGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDPGRSG*PRSAGH
Trigger: GTGACCAGCAGAGCGAGGCCACCCTGACCGTCCAGG...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CACAGCTGTGACCCGGAACTCATACTGACAGCCCTGCCGCACGTCCGCCACCGTATGGTAGGGGAATCCTaGACGGTCAGGGTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: HSCDPELILTALPHVRHRMVGES*TVRVAS
Trigger: CGAGGCCACCCTGACCGTCCAGGATTCCCCTACCAT...ACGGTGGCGGACGTGCGGCAGGGCTGTCAGTATGAGTTCCGGGTCACAGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCACTCTCAGGCACCGGCTaGTCGTTCACTGCCGTCCAG +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPLSGTG*SFTAVQ
Trigger: CTGGACGGCAGTGAACGACCAGCCGGTGCCTGAGAG...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCGCCCAGGGGGTCTCATaGGGTCCCGAGCAAAGACAG +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPAQGVS*GPEQRQ
Trigger: CTGTCTTTGCTCGGGACCCCATGAGACCCCCTGGGC...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGTGTAGGTGGTGACTaGCACGGTGCCCACATGGCA +
Preference number: 4 (lower is better)
Translates to: ALGTASILGIGFPGQCRCRVGGD*HGAHMA
Trigger: TGCCATGTGGGCACCGTGCCAGTCACCACCTACACG...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp AGCCTGCCGTCTCTCCACCACGTAGCACTCTACAGTCCGGCCCCCATTGTCCCTTGCACCAGGGCTGGCTaGTGTCCGAGGGTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SLPSLHHVALYSPAPIVPCTRAG*CPRVCW
Trigger: CCAGCAAACCCTCGGACACCAGCCAGCCCTGGTGCA...AGGGACAATGGGGGCCGGACTGTAGAGTGCTACGTGGTGGAGAGACGGCAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp TTCATTAACTGCTGTCACCCGCACGAAGTAGCCCTCTCCAGGCCGAAGCCCCTTCAGCACTCGCAGCCCTaGGGCAGCAGGTGGGACCGC +
Preference number: 4 (lower is better)
Translates to: FINCCHPHEVALSRPKPLQHSQP*GSRWDR
Trigger: GCGGTCCCACCTGCTGCCCCAGGGCTGCGAGTGCTG...AAGGGGCTTCGGCCTGGAGAGGGCTACTTCGTGCGGGTGACAGCAGTTAATGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp TGTGATGCCCTGGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGGGCCTTGGGGAGGGCCCAGTGTATTaGGGTCAGAGAAGCATAACC +
Preference number: 4 (lower is better)
Translates to: CDALAGGRQDGWRGRGLGEGPVY*GQRSIT
Trigger: GGTTATGCTTCTCTGACCCCAATACACTGGGCCCTC...CCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCCAGGGCATCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCCCTGGGTGTACAGCTaGCCTCCCGCTTCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDPWVYS*PPASCL
Trigger: CAGACAGGAAGCGGGAGGTCAGCTGTACACCCAGGG...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCCGCCTGTCAGCTTGTTaGTCTGCAGCACGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVRLSAC*SAARAP
Trigger: AGGAGCACGTGCTGCAGATCAACAAGCTGACAGGCG...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCTGTCCATGTCAGTGTaGTGCCCTGGCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDLSMSV*CPGWRP
Trigger: CGGCCTCCAGCCAGGGCATCACACTGACATGGACAG...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGCTCTCCGGGACCTaGGGGAGCCACAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASRLSGT*GSHSCD
Trigger: GTCACAGCTGTGGCTCCCTCAGGTCCCGGAGAGCCT...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCACCACTGGAGACTGTCTaGGCTGCACAGCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPPLETV*AAQLHH
Trigger: GTGGTGGAGCTGTGCAGCTCAGACAGTCTCCAGTGG...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGGGCATGCTGCCACCCTaGTACGGAAGCTGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVGMLPP*YGSCGQ
Trigger: TTGCCCACAGCTTCCGTATCAGGGTGGCAGCATGCC...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCTCTTGGCCACCACCCTaGAGTGGTATTCGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPSWPPP*SGIRGR
Trigger: CCGGCCACGAATACCACTTCAGGGTGGTGGCCAAGA...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCTGGCATCCACCCCCTaGCCAGACTCCGTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDLASTP*PDSVSP
Trigger: TGGACTGACGGAGTCTGGTCAGGGGGTGGATGCCAG...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCACTCCATAGGCTGTTCTaGCCCCAGTTCCCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPLHRLF*PQFPEA
Trigger: GGCCTCAGGGAACTGGGGTCAGAACAGCCTATGGAG...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTCCTGGGTCCCTCCTaGCCTATCTCTAGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQVLGPS*PISRGF
Trigger: AAAGCCTCTAGAGATAGGTCAGGAGGGACCCAGGAC...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGGGGGGCTCCCGGCTCTaGTCTTCATTCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVGGSRL*SSFSIS
Trigger: GGAGATGCTGAATGAAGATCAGAGCCGGGAGCCCCC...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp GGGCCCCGAGGTGCTGTCCATGTCAGTGTGATGCCCTGGCTGGAGGCCGACAGGCTTCCGGAGCTTTCCTaGCATAGTTCTGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GPRGAVHVSVMPWLEADRLPELS*HSSASS
Trigger: AGAGGAGGCAGAACTATGGCAGGAAAGCTCCGGAAG...CCTGTCGGCCTCCAGCCAGGGCATCACACTGACATGGACAGCACCTCGGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp GCTGGTGTCCGAGGGTTTGCTGGCCCCCAGCTCATTCTTGGCCACCACCCTGAAGAGGTGACGGGCTTCTaGTCAAAGTCCGGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: AGVRGFAGPQLILGHHPEEVTGF*SKSGVL
Trigger: CAGCACGCCGGACTTTGAGCAGAAGCCCGTCACCTC...TTCAGGGTGGTGGCCAAGAATGAGCTGGGGGCCAGCAAACCCTCGGACACCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp AGCCTGCCGTCTCTCCACCACGTAGCACTCTACAGTCCGGCCCCCATTGTCCCTGCAGCCTGCGCAACATaGCACGGTAGTCGACGATGC +
Preference number: 4 (lower is better)
Translates to: SLPSLHHVALYSPAPIVPAACAT*HGSRRC
Trigger: GCATCGTCGACTACCGTGGCATGTTGCGCAGGCTGC...AGGGACAATGGGGGCCGGACTGTAGAGTGCTACGTGGTGGAGAGACGGCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp CTGGGCCTCGTCAGGAGAGGGTTCCCACTCGGCCGTCACCGTCCCAGGCACGTTAGCCGGCGCAGACAGTaGTTGGTTTGGTTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LGLVRRGFPLGRHRPRHVSRRRQ*LVWLLK
Trigger: CTTCAACAACCAAACCAAGCACTGTCTGCGCCGGCT...AACGTGCCTGGGACGGTGACGGCCGAGTGGGAACCCTCTCCTGACGAGGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp GGAGCCACTGGAGACTGTCTGAGCTGCACAGCTCCACCACATACCCCTGGGCTTCCGGAAATGCCAGGCTaGACTAGGGCAGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GATGDCLSCTAPPHTPGLPEMPG*TRAGAG
Trigger: TCCAGCCCCTGCCCTAGTGCAGCCTGGCATTTCCGG...AAGCCCAGGGGTATGTGGTGGAGCTGTGCAGCTCAGACAGTCTCCAGTGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp TCGGAAGGTATACTTCCTGCCTGGCTCCACATGGGCATCCGTGAAGGTGGTGCTGCGGCCTCCCCCGGCTaGACTTCCATGTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SEGILPAWLHMGIREGGAAASPG*TSMSAR
Trigger: CCTGGCTGACATGGAAGTGCAGCCGGGGGAGGCCGC...AGCACCACCTTCACGGATGCCCATGTGGAGCCAGGCAGGAAGTATACCTTCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCATCAGCCAAGTGCTCCTaGCAGCCTGCCGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPSAKCS*QPAVSP
Trigger: TGGAGAGACGGCAGGCTGGCAGGAGCACTTGGCTGA...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp GGGCCCCGAGGTGCTGTCCATGTCAGTGTGATGCCCTGGCTGGAGGCCGACAGGGGAAGGTATACTTCCTaGCTGGCTCCACATGGGCAT +
Preference number: 4 (lower is better)
Translates to: GPRGAVHVSVMPWLEADRGRYTS*LAPHGH
Trigger: ATGCCCATGTGGAGCCAGGCAGGAAGTATACCTTCC...CCTGTCGGCCTCCAGCCAGGGCATCACACTGACATGGACAGCACCTCGGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACGCCGGGGCCCCGAGGTaGTGTCCATGTCAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDAGAPR*CPCQCD
Trigger: ATCACACTGACATGGACAGCACCTCGGGGCCCCGGC...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTAGCGGTTGGTGTGGATaGGGTCGGCTGCCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLSGWCG*GRLPRA
Trigger: GGCACGAGGCAGCCGACCGCATCCACACCAACCGCT...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCGCACGGCACAGCTCATaGAGCACTCGCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPARHSS*STRSPG
Trigger: CCCAGGGCTGCGAGTGCTGCATGAGCTGTGCCGTGC...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACGGTGGCAGTGCTGACTaGCTGGCCCAGCGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDGGSAD*LAQRVL
Trigger: GAGAACACGCTGGGCCAGGCAGTCAGCACTGCCACC...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CTGGGCCTCGTCAGGAGAGGGTTCCCACTCGGCCGTCACCGTCCCAGGCACGTTAGCCAGGAGGTGGAATaGCCTCCTCCCTTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LGLVRRGFPLGRHRPRHVSQEVE*PPPLFF
Trigger: GAAAAACAAGGGAGGAGGGCATTCCACCTCCTGGCT...AACGTGCCTGGGACGGTGACGGCCGAGTGGGAACCCTCTCCTGACGAGGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTAGGATTCAGGGGCCATaGCCACCTTGGAGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: ALGTASILGIGFPGQCRCRIQGP*PPWSQN
Trigger: GTTCTGGCTCCAAGGTGGGCATGGCCCCTGAATCCT...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCACGCCTCTTGGCCTGGTaGACCCTCCCCACCCTTAAA +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPRLLAW*TLPTLK
Trigger: TTTAAGGGTGGGGAGGGTGCACCAGGCCAAGAGGCG...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGCTCACTCCAGGGATGTaGGACTTCCGGAGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQLTPGM*DFRSFP
Trigger: AGGAAAGCTCCGGAAGTCCCACATCCCTGGAGTGAG...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CACCACCCTGAAGTGGTATTCGTGGCCGGGGAGGATGCCCAGGAGGGTGAAGCGGGCCTTGGGCATCCTTaGAGAAACTGCCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: HHPEVVFVAGEDAQEGEAGLGHP*RNCQCQ
Trigger: CTGGCACTGGCAGTTTCTCCAAGGATGCCCAAGGCC...CGCTTCACCCTCCTGGGCATCCTCCCCGGCCACGAATACCACTTCAGGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGGGGTACAGGAGAGTGTaGCGGCCTCCCCCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGGYRRV*RPPPAA
Trigger: TGCAGCCGGGGGAGGCCGCCACACTCTCCTGTACCC...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TCGGAAGGTATACTTCCTGCCTGGCTCCACATGGGCATCCGTGAAGGTGGTGCTGGGTACAGGAGAGTGTaGCGGCCTCCCCCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SEGILPAWLHMGIREGGAGYRRV*RPPPAA
Trigger: TGCAGCCGGGGGAGGCCGCCACACTCTCCTGTACCC...AGCACCACCTTCACGGATGCCCATGTGGAGCCAGGCAGGAAGTATACCTTCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCAATGGTAGGGGAATCCTaGACGGTCAGGGTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPMVGES*TVRVAS
Trigger: CGAGGCCACCCTGACCGTCCAGGATTCCCCTACCAT...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCGCCCCCATTGTCCCTTaGGGGCCGCCAGCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSAPIVP*GPPAEA
Trigger: TGCCTCCGCTGGCGGCCCCCAAGGGACAATGGGGGC...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCGGCCGACAGGATGGCTaGCGCGGAAGGGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCGRQDG*RGRGLG
Trigger: CCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCC...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp GGAGCCACTGGAGACTGTCTGAGCTGCACAGCTCCACCACATACCCCTGGGCTTGCCCAGGGGGTCTCATaGGGTCCCGAGCAAAGACAG +
Preference number: 4 (lower is better)
Translates to: GATGDCLSCTAPPHTPGLAQGVS*GPEQRQ
Trigger: CTGTCTTTGCTCGGGACCCCATGAGACCCCCTGGGC...AAGCCCAGGGGTATGTGGTGGAGCTGTGCAGCTCAGACAGTCTCCAGTGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCTGGCACGGGAGCCACTaGAGACTGTCTGAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPWHGSH*RLSELH
Trigger: GTGCAGCTCAGACAGTCTCCAGTGGCTCCCGTGCCA...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTGGCACGGTGCCCACATaGCACGGGAGCCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLGTVPT*HGSHWR
Trigger: TCTCCAGTGGCTCCCGTGCCATGTGGGCACCGTGCC...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TCCAGGGCCTCGCCAGCCCCCTCTGAGGTCACAGCCCGCACTCGGAAGGTATACGCAAGTCCTTGGTGCTaGAGTCCACGAGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: SRASPAPSEVTARTRKVYASPWC*SPRGTW
Trigger: CCAAGTTCCTCGTGGACTCCAGCACCAAGGACTTGC...GTATACCTTCCGAGTGCGGGCTGTGACCTCAGAGGGGGCTGGCGAGGCCCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGCTGAAGTGGTATTCGTaGCCGGGGAGGATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVLKWYS*PGRMPR
Trigger: CCTGGGCATCCTCCCCGGCCACGAATACCACTTCAG...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCTGTCCGAGGGTTTGCTaGCCCCCAGCTCATTCTTGG +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVCPRVC*PPAHSW
Trigger: CCAAGAATGAGCTGGGGGCCAGCAAACCCTCGGACA...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGCTCCATCCTTGGGATTaGCTTCCCGGGCCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVLHPWD*LPGPVQ
Trigger: CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGACTTCACGTCCTCCTaGCCAAAACCTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVDFTSS*PKPRQA
Trigger: TGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTC...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCGGGCTGGCTATGTGCTaGAGCCCAGAAGCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPGLAMC*SPEAGP
Trigger: TGGGCCGGCTTCTGGGCTCCAGCACATAGCCAGCCC...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGGCTTCCCTCTGCTACTaGAAAGCCCTCGCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVASLCY*KALALL
Trigger: CAGGAGGGCGAGGGCTTTCCAGTAGCAGAGGGAAGC...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCTTAGCCAGTGGCTTCTaGCATCCACCCCCTGACCAG +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVLASGF*HPPPDQ
Trigger: CTGGTCAGGGGGTGGATGCCAGAAGCCACTGGCTAA...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCGCTATCCAGGGACCATaGGCTTCGGCATCCACCAGC +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPAIQGP*ASASTS
Trigger: GCTGGTGGATGCCGAAGCCCATGGTCCCTGGATAGC...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCACGCCTGTCAGCTTGTTaGTCTGCAGCACGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPRLSAC*SAARAP
Trigger: AGGAGCACGTGCTGCAGATCAACAAGCTGACAGGCG...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCCATCAGCTCCTTCCTaGGGTCTTCCTGCGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDPSAPS*GLPAVP
Trigger: GGGAACCGCAGGAAGACCTCAGGAAGGAGCTGATGG...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCAGCCCTATGGCAATCCTaGACCTCCATGGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPALWQS*TSMGPC
Trigger: ACAAGGCCCCATGGAGGTTCAGGATTGCCATAGGGC...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCACTGTCCATGTCAGTGTaGTGCCCTGGCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASLSMSV*CPGWRP
Trigger: CGGCCTCCAGCCAGGGCATCACACTGACATGGACAG...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCAGGGACCGTGCGCTaGGGAGCGTGTGAACACCGC +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCPGTVR*GACEHR
Trigger: GCGGTGTTCACACGCTCCTCAGCGCACGGTCCCTGG...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTATACGCTGGGGATGGTaGGGGAGCACACGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLIRWGW*GSTRPA
Trigger: TGCTGGGCGTGTGCTCCCTCACCATCCCCAGCGTAT...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCGCCCCTGACTGTGCCTaGGACCTGCTCCTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPAPDCA*DLLLSE
Trigger: CTCACTCAGGAGCAGGTCTCAGGCACAGTCAGGGGC...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGCTTCCGGAGCTTTCCTaGCATAGTTCTGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQLPELS*HSSASS
Trigger: AGAGGAGGCAGAACTATGGCAGGAAAGCTCCGGAAG...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCCACCAGCTGCCAGATaGTCACTCCAGGGATGTGGG +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDPPAAR*SLQGCG
Trigger: CCCACATCCCTGGAGTGAGCATCTGGCAGCTGGTGG...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TCCCGAGCAAAGACAGCATCCGATGGAGGTCCAGGCTCTCCGGGACCTGAGGGAGCTCAAAGTCCGGCGTaGTGCAGCCTTCAGGGATCT +
Preference number: 4 (lower is better)
Translates to: SRAKTASDGGPGSPGPEGAQSPA*CSLQGS
Trigger: AGATCCCTGAAGGCTGCAGCACGCCGGACTTTGAGC...TCCCTCAGGTCCCGGAGAGCCTGGACCTCCATCGGATGCTGTCTTTGCTCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTGCAGCACGTGCTCCTTaGTGCCAGGGCTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLAARAP*CQGWRR
Trigger: TCTCCTCCAGCCCTGGCAGCAAGGAGCACGTGCTGC...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGTTGATCTGCAGCACGTaGTCCTTGCTGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVLICST*SLLPGL
Trigger: CAGCCCTGGCAGCAAGGAGCACGTGCTGCAGATCAA...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTCAGCTTGTTGATCTaGAGCACGTGCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQVSLLI*STCSLL
Trigger: CAGCAAGGAGCACGTGCTGCAGATCAACAAGCTGAC...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGACTGCGTCACCCTaGTCCTCACAGTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVKTASP*SSQWVS
Trigger: GGAGACCCACTGTGAGGAGCAGGGTGACGCAGTCTT...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCGGCCACAGTCCTTCCTaGCTGCGCTGGGGAGGCACA +
Preference number: 4 (lower is better)
Translates to: KALAAPLESLESRRWRLPGHSPS*LRWGGT
Trigger: TGTGCCTCCCCAGCGCAGGCAGGAAGGACTGTGGCC...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCGTGGATGCGGTCGGCTaGCTCGTGCCAGGGACCGTG +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSVDAVG*LVPGTV
Trigger: CACGGTCCCTGGCACGAGGCAGCCGACCGCATCCAC...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTAGGAGTAGCCATGTCTaGCAAGGCCATCCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: ALGTASILGIGFPGQCRCRSSHV*QGHPCL
Trigger: CAGACAGGGATGGCCTTGGCAGACATGGCTACTCCT...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTTCAGACTGGCATCCCTaGAGGTCGCTCTTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: ALGTASILGIGFPGQCRCSDWHP*RSLFPL
Trigger: GAGAGGAAAGAGCGACCTGCAGGGATGCCAGTCTGA...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCCCTTGCTGCCAGGGCTaGAGGAGATCTTGTACTTGC +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVPCCQG*RRSCTC
Trigger: GCAAGTACAAGATCTCCTCCAGCCCTGGCAGCAAGG...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCCTCACCACCAGCCGGTaGGTCAGCCCGTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFLTTSR*VSPSGD
Trigger: GTCCCCTGACGGGCTGACCCACCGGCTGGTGGTGAG...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTAGTGTCACGCTGTACTaGCCACAGTCCTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: ALGTASILGIGFPGQCRCSVTLY*PQSFLP
Trigger: AGGCAGGAAGGACTGTGGCCAGTACAGCGTGACACT...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGTATACTTCCTGCCTaGCTCCACATGGGCATCCGT +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVGILPA*LHMGIR
Trigger: ACGGATGCCCATGTGGAGCCAGGCAGGAAGTATACC...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCGCGCGGAAGGGGCCTTaGGGAGAGCCTCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFARKGP*GEPQEP
Trigger: TGGCTCCTGAGGCTCTCCCCAAGGCCCCTTCCGCGC...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTGGAGGCCGACAGGATaGCTGGCGCGGAAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFWRPTG*LARKGP
Trigger: AGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCA...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAGCCACCACCCTGAAGTaGTATTCGTGGCCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASATTLK*YSWPGR
Trigger: CCTCCCCGGCCACGAATACCACTTCAGGGTGGTGGC...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp GTATACTTCCTGCCTGGCTCCACATGGGCATCCGTGAAGGTGGTGCTGTCAGCGGCCACCACCCTGAAGTaGTATTCGTGGCCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VYFLPGSTWASVKVVLSAATTLK*YSWPGR
Trigger: CCTCCCCGGCCACGAATACCACTTCAGGGTGGTGGC...CGCTGACAGCACCACCTTCACGGATGCCCATGTGGAGCCAGGCAGGAAGTATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAGGGATGCACCAGGGCTaGCTGGTGTCCGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASGMHQG*LVSEGL
Trigger: CAAACCCTCGGACACCAGCCAGCCCTGGTGCATCCC...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp ACATGGCACGGGAGCCACTGGAGACTGTCTGAGCTGCACAGCTCCACCACATACGGGATGCACCAGGGCTaGCTGGTGTCCGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: TWHGSHWRLSELHSSTTYGMHQG*LVSEGL
Trigger: CAAACCCTCGGACACCAGCCAGCCCTGGTGCATCCC...GTATGTGGTGGAGCTGTGCAGCTCAGACAGTCTCCAGTGGCTCCCGTGCCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCAGGAACCGGGGCTTCTaGCTCAGGTCGGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCRNRGF*LRSGSR
Trigger: CCGGGAGCCCGACCTGAGCCAGAAGCCCCGGTTCCT...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTTGAACCAGGTGACGTaGGGCCGGGGCGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFLNQVT*GRGEPC
Trigger: GCAGGGCTCGCCCCGGCCCCACGTCACCTGGTTCAA...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCGACTTCACGTCCTCCTaGCCAAAACCTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPDFTSS*PKPRQA
Trigger: TGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTC...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TCCCGAGCAAAGACAGCATCCGATGGAGGTCCAGGCTCTCCGGGACCTGAGGGAGACTTCACGTCCTCCTaGCCAAAACCTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SRAKTASDGGPGSPGPEGDFTSS*PKPRQA
Trigger: TGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTC...TCCCTCAGGTCCCGGAGAGCCTGGACCTCCATCGGATGCTGTCTTTGCTCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CTGGGCCTCGTCAGGAGAGGGTTCCCACTCGGCCGTCACCGTCCCAGGCACGTTTTGAGTGACTTAGCTTaGAGCCAGGAGGTGGAATGC +
Preference number: 4 (lower is better)
Translates to: LGLVRRGFPLGRHRPRHVLSDLA*SQEVEC
Trigger: GCATTCCACCTCCTGGCTCCAAGCTAAGTCACTCAA...AACGTGCCTGGGACGGTGACGGCCGAGTGGGAACCCTCTCCTGACGAGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCCCTGCTGTCCAGCCCTaGGAAGACTGGAAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPPAVQP*EDWKLL
Trigger: CAGAAGCTTCCAGTCTTCCCAGGGCTGGACAGCAGG...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTAGGGCCCCAGGACCCTaGACCTCACCATTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLRAPGP*TSPFSA
Trigger: GGCTGAGAATGGTGAGGTCCAGGGTCCTGGGGCCCT...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
3UTR CAA 72 bp GCCAGCCCTATGGCAATCCTGAACCTCCATGGGGCCTaGTGGGGGATCAGGCTTGTCTTGCTGGCACCACTC +
Preference number: 4 (lower is better)
Translates to: ASPMAILNLHGA*WGIRLVLLAPL
Trigger: GAGTGGTGCCAGCAAGACAAGCCTGATCCCCCACAAGGCCCCATGGAGGTTCAGGATTGCCATAGGGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACGACAGTGAGTCTCACTaGGCAAGCGGCCTCTCCGTA +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDDSESH*ASGLSV
Trigger: TACGGAGAGGCCGCTTGCTCAGTGAGACTCACTGTC...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CACTGCCGTCCAGGTGTTGCTCCCCTTCTTACGCCTCTCGATCAGGTAGCCCAGGCCCTATGGCAATCCTaGACCTCCATGGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: HCRPGVAPLLTPLDQVAQALWQS*TSMGPC
Trigger: ACAAGGCCCCATGGAGGTTCAGGATTGCCATAGGGC...CTGGGCTACCTGATCGAGAGGCGTAAGAAGGGGAGCAACACCTGGACGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGCCACATGGGCATCCGTaGAGGTGGTGCTGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGPHGHP*RWCCQR
Trigger: CCGCTGACAGCACCACCTTCACGGATGCCCATGTGG...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp TTCATTAACTGCTGTCACCCGCACGAAGTAGCCCTCTCCAGGCCGAAGCCCCTTCTGTCCATGTCAGTGTaGTGCCCTGGCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: FINCCHPHEVALSRPKPLLSMSV*CPGWRP
Trigger: CGGCCTCCAGCCAGGGCATCACACTGACATGGACAG...AAGGGGCTTCGGCCTGGAGAGGGCTACTTCGTGCGGGTGACAGCAGTTAATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTGGCATGCTGCCACCCTaGTACGGAAGCTGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLGMLPP*YGSCGQ
Trigger: TTGCCCACAGCTTCCGTATCAGGGTGGCAGCATGCC...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCACGGAGCCTTCACTGTaGACCTGTCGCGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSTEPSL*TCRAAG
Trigger: CCCGGCAGCGCGACAGGTTCACAGTGAAGGCTCCGT...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCATGCAGGTGTCGGAAGTaGAGCTTCAAGGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPCRCRK*SFKGPG
Trigger: TCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCA...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CTGGGCCTCGTCAGGAGAGGGTTCCCACTCGGCCGTCACCGTCCCAGGCACGTTTGTCATTCTGTTGAGTaGCTTAGCTTGGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LGLVRRGFPLGRHRPRHVCHSVE*LSLEPG
Trigger: TCCTGGCTCCAAGCTAAGTCACTCAACAGAATGACA...AACGTGCCTGGGACGGTGACGGCCGAGTGGGAACCCTCTCCTGACGAGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGATTGTGAGGTGCGAGTaGCTCAGGGTGCCTGGTATC +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVIVRCE*LRVPGI
Trigger: GATACCAGGCACCCTGAGTCACTCGCACCTCACAAT...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCATCCTTGGAGGCCTCCTaGACCATCTCTAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPSLEAS*TISKAC
Trigger: GCAGGCTTTAGAGATGGTTCAGGAGGCCTCCAAGGA...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACACTGACCTCACTCCCTaGCCCCATGCCACTAGTTCC +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDTDLTP*PHATSS
Trigger: GGAACTAGTGGCATGGGGTCAGGGAGTGAGGTCAGT...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGCAATATCCTGACCTGTaGCCCATGGCTTTATGGCCT +
Preference number: 4 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQQYPDL*PMALWP
Trigger: AGGCCATAAAGCCATGGGTCACAGGTCAGGATATTG...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGTGCTACCCAATATCCTaGCCTGTGACCCATGGCTTT +
Preference number: 4 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQCYPIS*PVTHGF
Trigger: AAAGCCATGGGTCACAGGTCAGGATATTGGGTAGCA...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAGGAGCCTCGCTCATCTaGAAGAGTCTGTCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASGASLI*KSLSPS
Trigger: GGAGGGCGACAGACTCTTTCAGATGAGCGAGGCTCC...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTGGCCTCAGGGATCCCTaGAGTTCCATAGCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLGLRDP*SSIAPK
Trigger: CTTGGGGGCTATGGAACTTCAGGGATCCCTGAGGCC...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCCGCTGTCCAGATCCTaGCCTGTCCCCACTGAACTC +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLPLSRS*PVPTEL
Trigger: GAGTTCAGTGGGGACAGGTCAGGATCTGGACAGCGG...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCATCCAACCTCAGCCCCTaGCTGTGCCTGAGACCTGCT +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASSNLSP*LCLRPA
Trigger: AGCAGGTCTCAGGCACAGTCAGGGGCTGAGGTTGGA...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACATCTCCTCCACCAGCTaGCAGATGCTCACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDISSTS*QMLTPG
Trigger: CCCTGGAGTGAGCATCTGGCAGCTGGTGGAGGAGAT...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CAGCCCTATGGCAATCCTGAACCTCCATGGGGCCTTGTGGGGGATCAGGCTTGTGCACGTGCTCCTTGCTaGCAGGGCTGGAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: QPYGNPEPPWGLVGDQACARAPC*QGWRRS
Trigger: AGATCTCCTCCAGCCCTGGCAGCAAGGAGCACGTGC...ACAAGCCTGATCCCCCACAAGGCCCCATGGAGGTTCAGGATTGCCATAGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp GCTGGTGTTCGATCTGTCTGTGACTTGGAGATTCCTCACCAGCCCAGGGGGTCTGCAGCACGTGCTCCTTaGTGCCAGGGCTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: AGVRSVCDLEIPHQPRGSAARAP*CQGWRR
Trigger: TCTCCTCCAGCCCTGGCAGCAAGGAGCACGTGCTGC...AGACCCCCTGGGCTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp CACAGCTGTGACCCGGAACTCATACTGACAGCCCTGCCGCACGTCCGCCACCGTGTCAGCTTGTTGATCTaGAGCACGTGCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: HSCDPELILTALPHVRHRVSLLI*STCSLL
Trigger: CAGCAAGGAGCACGTGCTGCAGATCAACAAGCTGAC...ACGGTGGCGGACGTGCGGCAGGGCTGTCAGTATGAGTTCCGGGTCACAGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCTCCTGCGGTTCCCTGTaGCTCTTCCGATTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPSCGSL*LFRFFR
Trigger: TCGGAAGAATCGGAAGAGGCACAGGGAACCGCAGGA...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAGCAGCCTGCGCAACATaGCACGGTAGTCGACGATGC +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASAACAT*HGSRRC
Trigger: GCATCGTCGACTACCGTGGCATGTTGCGCAGGCTGC...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCTCCTTCTTCATCTCCTaGAGCCTGCGCAACATGCCA +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVSFFIS*SLRNMP
Trigger: TGGCATGTTGCGCAGGCTGCAGGAGATGAAGAAGGA...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGAGCCGGTGCCGGAAATaGCAGGCTGCACTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGSRCRK*QAALGQ
Trigger: CTGCCCTAGTGCAGCCTGGCATTTCCGGCACCGGCT...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTAAGTGTAGAGCCCGGTaGCCAGCGAATAGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLKCRAR*PANRGP
Trigger: TGGGCCCCTATTCGCTGGGCACCGGGCTCTACACTT...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CACTGCCGTCCAGGTGTTGCTCCCCTTCTTACGCCTCTCGATCAGGTAGCCCAGCCAGCTTGGGTCCCCTaGACATGCGTGATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: HCRPGVAPLLTPLDQVAQPAWVP*TCVMKR
Trigger: CCTCTTCATCACGCATGTGCAGGGGACCCAAGCTGG...CTGGGCTACCTGATCGAGAGGCGTAAGAAGGGGAGCAACACCTGGACGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp CACTGCCGTCCAGGTGTTGCTCCCCTTCTTACGCCTCTCGATCAGGTAGCCCAGAGGGTGGCCTCGCTCTaGTGGTCACCAGCTACAAAG +
Preference number: 4 (lower is better)
Translates to: HCRPGVAPLLTPLDQVAQRVASL*WSPATK
Trigger: CTTTGTAGCTGGTGACCAGCAGAGCGAGGCCACCCT...CTGGGCTACCTGATCGAGAGGCGTAAGAAGGGGAGCAACACCTGGACGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCGGCCACAGTCCTTCCTaGCTGCGCTGGGGAGGCACA +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCGHSPS*LRWGGT
Trigger: TGTGCCTCCCCAGCGCAGGCAGGAAGGACTGTGGCC...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGGCCGGGGCCCCGAGGTaGTGTCCATGTCAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGAGAPR*CPCQCD
Trigger: ATCACACTGACATGGACAGCACCTCGGGGCCCCGGC...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCTGCCGTCCAGGTGTTaGTCCCCTTCTTACGCCTCT +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDLPSRC*SPSYAS
Trigger: AGAGGCGTAAGAAGGGGAGCAACACCTGGACGGCAG...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGTGGATGCGGTCGGCTaGCTCGTGCCAGGGACCGTG +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPVDAVG*LVPGTV
Trigger: CACGGTCCCTGGCACGAGGCAGCCGACCGCATCCAC...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCAGCGGTTGGTGTGGATaGGGTCGGCTGCCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFSGWCG*GRLPRA
Trigger: GGCACGAGGCAGCCGACCGCATCCACACCAACCGCT...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGTGAACCTGTCGCGCTaGCGGGGGATGCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPVNLSR*RGMHQG
Trigger: GCCCTGGTGCATCCCCCGGCAGCGCGACAGGTTCAC...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGGATGCCTGGGCTCCTTaGCTCTGCAGTTTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVDAWAP*LCSLWS
Trigger: TGACCACAAACTGCAGAGGCAAGGAGCCCAGGCATC...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCAGAGCTCTCTGGTTCTaGTTCCACACATCCCATCCC +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVRALWF*FHTSHP
Trigger: GGGATGGGATGTGTGGAAGCAGAACCAGAGAGCTCT...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCAACCAGCCCTGTAACCTaGACCCATTCCCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPTSPVT*THSLRN
Trigger: GTTCCTGAGGGAATGGGTGCAGGTTACAGGGCTGGT...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCTGGAGCCTGCGGGCTaGTTCCCAGCATCTATGCTG +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLLEPAG*FPASML
Trigger: CAGCATAGATGCTGGGAAGCAGCCCGCAGGCTCCAG...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCGCCTCCAGGGACCCCTaGTCCCCGAGGGACCTCTTT +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCASRDP*SPRDLF
Trigger: AAAGAGGTCCCTCGGGGAGCAGGGGTCCCTGGAGGC...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCCTCACTCCAGGGATGTaGGACTTCCGGAGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPLTPGM*DFRSFP
Trigger: AGGAAAGCTCCGGAAGTCCCACATCCCTGGAGTGAG...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACAGCATTTTTCCCCTCTaGCAGAGCCGAGGTGACGGG +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDSIFPL*QSRGDG
Trigger: CCCGTCACCTCGGCTCTGCCAGAGGGGAAAAATGCT...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp AGCCTGCCGTCTCTCCACCACGTAGCACTCTACAGTCCGGCCCCCATTGTCCCTCCTTGCTGCCAGGGCTaGAGGAGATCTTGTACTTGC +
Preference number: 4 (lower is better)
Translates to: SLPSLHHVALYSPAPIVPPCCQG*RRSCTC
Trigger: GCAAGTACAAGATCTCCTCCAGCCCTGGCAGCAAGG...AGGGACAATGGGGGCCGGACTGTAGAGTGCTACGTGGTGGAGAGACGGCAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCAGGCCCTGGGAGAAGTaGCCCATGGGGCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCRPWEK*PMGPWA
Trigger: TGCCCAAGGCCCCATGGGCCACTTCTCCCAGGGCCT...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTAAGATGACTCCATCCTaGGTGGTGAGCTTGACGCCA +
Preference number: 4 (lower is better)
Translates to: ALGTASILGIGFPGQCRCKMTPS*VVSLTP
Trigger: TGGCGTCAAGCTCACCACCCAGGATGGAGTCATCTT...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACGTGGCCTCGCTCTGCTaGTCACCAGCTACAAAGGTG +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDVASLC*SPATKV
Trigger: CACCTTTGTAGCTGGTGACCAGCAGAGCGAGGCCAC...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTATGGTAGGGGAATCCTaGACGGTCAGGGTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLMVGES*TVRVAS
Trigger: CGAGGCCACCCTGACCGTCCAGGATTCCCCTACCAT...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CATGTCAGTGTGATGCCCTGGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGGAGCCTTGACCACCAGTaGCTCTCTCAGTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: HVSVMPWLEADRMAGAEGSLDHQ*LSQFLC
Trigger: ACAGAGAAACTGAGAGAGCCACTGGTGGTCAAGGCT...CCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCCAGGGCATCACACTGACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGCTCCATGGGGCCTTGTaGGGGATCAGGCTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVLHGAL*GIRLVY
Trigger: ATAGACAAGCCTGATCCCCCACAAGGCCCCATGGAG...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCAATCCTGAACCTCCATaGGGCCTTGTGGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPNPEPP*GLVGDQ
Trigger: CTGATCCCCCACAAGGCCCCATGGAGGTTCAGGATT...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAATCCTGAACCTCCATaGGGCCTTGTGGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVNPEPP*GLVGDQ
Trigger: CTGATCCCCCACAAGGCCCCATGGAGGTTCAGGATT...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCCTGCCTGGCTCCACATaGGCATCCGTGAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPLPGST*ASVKVV
Trigger: CACCACCTTCACGGATGCCCATGTGGAGCCAGGCAG...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGGGTATACTTCCTGCCTaGCTCCACATGGGCATCCGT +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVGILPA*LHMGIR
Trigger: ACGGATGCCCATGTGGAGCCAGGCAGGAAGTATACC...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCCGTGTAGGTGGTGACTaGCACGGTGCCCACATGGCA +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPRVGGD*HGAHMA
Trigger: TGCCATGTGGGCACCGTGCCAGTCACCACCTACACG...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCAGCACTGGGCTGGCTCTaGCCTCCTTCATTAACTGCT +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPALGWL*PPSLTA
Trigger: AGCAGTTAATGAAGGAGGCCAGAGCCAGCCCAGTGC...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp ACATGGCACGGGAGCCACTGGAGACTGTCTGAGCTGCACAGCTCCACCACATACATGTGTCCAGGGCACTaGGCTGGCTCTGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: TWHGSHWRLSELHSSTTYMCPGH*AGSGLL
Trigger: AAGGAGGCCAGAGCCAGCCCAGTGCCCTGGACACAT...GTATGTGGTGGAGCTGTGCAGCTCAGACAGTCTCCAGTGGCTCCCGTGCCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCGCAAGTCCTTGGTGCTaGAGTCCACGAGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPASPWC*SPRGTW
Trigger: CCAAGTTCCTCGTGGACTCCAGCACCAAGGACTTGC...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGCTGTCAGCAAGTCCTTaGTGCTGGAGTCCACGAGGA +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVLSASP*CWSPRG
Trigger: TCCTCGTGGACTCCAGCACCAAGGACTTGCTGACAG...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCCTGTCAGCAAGTCCTTaGTGCTGGAGTCCACGAGGA +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPLSASP*CWSPRG
Trigger: TCCTCGTGGACTCCAGCACCAAGGACTTGCTGACAG...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCTTGGAGCCAGGAGGTaGAATGCCCTCCTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDLGARR*NALLPC
Trigger: ACAAGGGAGGAGGGCATTCCACCTCCTGGCTCCAAG...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCCATCCCTGTCTGGGCTaGCTATGTGCTGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPHPCLG*LCAGAQ
Trigger: CTGGGCTCCAGCACATAGCCAGCCCAGACAGGGATG...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCAGCCTGAAGCCGACTaGACCCAGCCTCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCQPEAD*TQPPSL
Trigger: GAGGCTGGGAGGCTGGGTCCAGTCGGCTTCAGGCTG...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGGCCACCTGCAGTGCCTaGCATTCCAGCCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGATCSA*HSSHPR
Trigger: CCTGGGATGGCTGGAATGCCAGGCACTGCAGGTGGC...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp GCTGGTGTTCGATCTGTCTGTGACTTGGAGATTCCTCACCAGCCCAGGGGGTCTCCATCAGCTCCTTCCTaGGGTCTTCCTGCGGTTCCC +
Preference number: 4 (lower is better)
Translates to: AGVRSVCDLEIPHQPRGSPSAPS*GLPAVP
Trigger: GGGAACCGCAGGAAGACCTCAGGAAGGAGCTGATGG...AGACCCCCTGGGCTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCGTCCCAGGTCACTGGTaGGGGTACAGGAGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: KALAAPLESLESRRWRLPVPGHW*GYRRVW
Trigger: CCACACTCTCCTGTACCCTCACCAGTGACCTGGGAC...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTTCCTCCAGGCAGCCTaGATGGGGAGGTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSFLQAA*MGRWLW
Trigger: CCAGAGCCACCTCCCCATTCAGGCTGCCTGGAGGAA...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCACCCGGAACTCATACTaGCAGCCCTGCCGCACGTCC +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCTRNSY*QPCRTS
Trigger: GGACGTGCGGCAGGGCTGTCAGTATGAGTTCCGGGT...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGCCACTGGAGACTGTCTaGGCTGCACAGCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGPLETV*AAQLHH
Trigger: GTGGTGGAGCTGTGCAGCTCAGACAGTCTCCAGTGG...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCTCTTGGCCACCACCCTaGAGTGGTATTCGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: KALAAPLESLESRRWRLPSWPPP*SGIRGR
Trigger: CCGGCCACGAATACCACTTCAGGGTGGTGGCCAAGA...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACTGCAGGTGTCGGAAGTaGAGCTTCAAGGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDCRCRK*SFKGPG
Trigger: TCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCA...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCAAAGAAACCCATATGGTaGGGGTCCAGGAGGTTCGCT +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPKKPIW*GSRRFA
Trigger: AGCGAACCTCCTGGACCCTCACCATATGGGTTTCTT...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCCACACACACGACCTTaGTGCCCTAGTCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLPHTRP*CPSPHP
Trigger: TGGGTGAGGACTAGGGCATCAAGGTCGTGTGTGTGG...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGACTCTTCTGCTCCTaGTGCCTGGGCTCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASRLFCS*CLGSLP
Trigger: AGGCAAGGAGCCCAGGCATCAGGAGCAGAAGAGTCT...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCTCCAGGGCCCCAGGCTaGGTCAGCTGTCCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCSRAPG*VSCPFV
Trigger: GACAAAGGGACAGCTGACTCAGCCTGGGGCCCTGGA...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCGGCCATCCCTTCCCCTaGGCTCCTGTAGGACACCTT +
Preference number: 4 (lower is better)
Translates to: KALAAPLESLESRRWRLPGHPFP*APVGHL
Trigger: AAGGTGTCCTACAGGAGCTCAGGGGAAGGGATGGCC...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCATACTCTGGAGCTCCCTaGCCCATTCCAGAAATCTGG +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPYSGAP*PIPEIW
Trigger: CCAGATTTCTGGAATGGGTCAGGGAGCTCCAGAGTA...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCCAATCCCATTCCTATaGCCTGACTCATCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: ALGTASILGIGFPGQCRCPIPFL*PDSSSD
Trigger: GTCACTGGATGAGTCAGGTCATAGGAATGGGATTGG...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGGCACGTGCTCCTTGCTaGCAGGGCTGGAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGARAPC*QGWRRS
Trigger: AGATCTCCTCCAGCCCTGGCAGCAAGGAGCACGTGC...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTACGCATTTACTGCTGTaGAGCGGTACAGATCCGTGT +
Preference number: 4 (lower is better)
Translates to: ALGTASILGIGFPGQCRCTHLLL*SGTDPC
Trigger: ACACGGATCTGTACCGCTGCACAGCAGTAAATGCGT...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCTCCGTACGCATTTACTaGTGTGCAGCGGTACAGATC +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVSVRIY*CAAVQI
Trigger: GATCTGTACCGCTGCACAGCAGTAAATGCGTACGGA...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CACAGCTGTGACCCGGAACTCATACTGACAGCCCTGCCGCACGTCCGCCACCGTTCCGTACGCATTTACTaGTGTGCAGCGGTACAGATC +
Preference number: 4 (lower is better)
Translates to: HSCDPELILTALPHVRHRSVRIY*CAAVQI
Trigger: GATCTGTACCGCTGCACAGCAGTAAATGCGTACGGA...ACGGTGGCGGACGTGCGGCAGGGCTGTCAGTATGAGTTCCGGGTCACAGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACTTCCTGAGGTCTTCCTaGGGTTCCCTGTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDFLRSS*GSLCLF
Trigger: GAAGAGGCACAGGGAACCGCAGGAAGACCTCAGGAA...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCAGTAGTCCTTCCTGTCTaGTGTCATCAGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPVVLPV*CHQQLP
Trigger: TGGCAGCTGCTGATGACAGCAGACAGGAAGGACTAC...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTAAGACTGCGTCACCCTaGTCCTCACAGTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLKTASP*SSQWVS
Trigger: GGAGACCCACTGTGAGGAGCAGGGTGACGCAGTCTT...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGAAGTGTAGAGCCCGGTaGCCAGCGAATAGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGKCRAR*PANRGP
Trigger: TGGGCCCCTATTCGCTGGGCACCGGGCTCTACACTT...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCAAGTGTAGAGCCCGGTaGCCAGCGAATAGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: KALAAPLESLESRRWRLPKCRAR*PANRGP
Trigger: TGGGCCCCTATTCGCTGGGCACCGGGCTCTACACTT...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTAGGGTGGCCTCGCTCTaGTGGTCACCAGCTACAAAG +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLRVASL*WSPATK
Trigger: CTTTGTAGCTGGTGACCAGCAGAGCGAGGCCACCCT...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TCTGTGACTTGGAGATTCCTCACCAGCCCAGGGGGTCTCATGGGGTCCCGAGCAGGAGACTGTCTGAGCTaGACAGCTCCACCACATACC +
Preference number: 4 (lower is better)
Translates to: SVTWRFLTSPGGLMGSRAGDCLS*TAPPHT
Trigger: GGTATGTGGTGGAGCTGTGCAGCTCAGACAGTCTCC...TGCTCGGGACCCCATGAGACCCCCTGGGCTGGTGAGGAATCTCCAAGTCACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTGTAACAGGCATGGCTTaGACTAATGTGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ALGTASILGIGFPGQCRCVTGMA*TNVSRA
Trigger: TGCCCTGGACACATTAGTGCAAGCCATGCCTGTTAC...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCATGGTGTCCGAGGGTTTaGTGGCCCCCAGCTCATTCT +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASWCPRV*WPPAHS
Trigger: AGAATGAGCTGGGGGCCAGCAAACCCTCGGACACCA...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCCATCCTGCAGGCAGGTaGCCTCTGGATCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPHPAGR*PLDLLK
Trigger: CTTCAGGAGATCCAGAGGGCACCTGCCTGCAGGATG...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCCTCCACTCCCGCAGGTaGCCTAGGGGAAACTCTACA +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPLHSRR*PRGNST
Trigger: TGTAGAGTTTCCCCTAGGGCACCTGCGGGAGTGGAG...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCCCAGACCCTCCTCCTaGAGGGCCAGAATCTTCATT +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDPRPSS*RARIFI
Trigger: AATGAAGATTCTGGCCCTGCAGGAGGAGGGTCTGGG...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCTAGGGTCCATGCCTaGCTGGCATGCAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCPRVHA*LACRGP
Trigger: TGGGCCTCTGCATGCCAGGCAGGCATGGACCCTAGG...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCTGTCTCTGTGTGCCATaGCACCTGCAGTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPCLCVP*HLQCLA
Trigger: TGCCAGGCACTGCAGGTGGCATGGCACACAGAGACA...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCACTTCCACTGCCCCCTTaGCATCAAGAAACCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPLPLPP*HQETQK
Trigger: CTTCTGGGTTTCTTGATGGCAAGGGGGCAGTGGAAG...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCTGTCATTCCTGGGCCTaGTTTCCAGATGTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPCHSWA*FPDVPF
Trigger: GAACGGGACATCTGGAAAGCAGGCCCAGGAATGACA...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp TGTGATGCCCTGGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGGGCCTTGGGTGTGTTCATCTCAACTaGTTCTTCCTAAGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: CDALAGGRQDGWRGRGLGCVHLN*FFLSSL
Trigger: CAGACTGCTTAGGAAGAAGCAGTTGAGATGAACACA...CCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCCAGGGCATCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGCATTTTTCCCCTCTaGCAGAGCCGAGGTGACGGG +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASSIFPL*QSRGDG
Trigger: CCCGTCACCTCGGCTCTGCCAGAGGGGAAAAATGCT...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCTTTCTTGGGGGCTGGTaGGGCCCTCTTTTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPFLGGW*GPLFQQ
Trigger: TTGCTGAAAAAGAGGGCCCCACCAGCCCCCAAGAAA...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp AGCCTGCCGTCTCTCCACCACGTAGCACTCTACAGTCCGGCCCCCATTGTCCCTTATTTGTCACTGGGGTaGAGTAGCCGGTGCCGGAAA +
Preference number: 4 (lower is better)
Translates to: SLPSLHHVALYSPAPIVPYLSLG*SSRCRK
Trigger: TTTCCGGCACCGGCTACTCCACCCCAGTGACAAATA...AGGGACAATGGGGGCCGGACTGTAGAGTGCTACGTGGTGGAGAGACGGCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCGGCCTTGGGCATCCTTaGAGAAACTGCCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPGLGHP*RNCQCQ
Trigger: CTGGCACTGGCAGTTTCTCCAAGGATGCCCAAGGCC...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCGGGAGAAGTGGCCCATaGGGCCTTGGGCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCGRSGP*GLGHPW
Trigger: CCAAGGATGCCCAAGGCCCCATGGGCCACTTCTCCC...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp TCCCGAGCAAAGACAGCATCCGATGGAGGTCCAGGCTCTCCGGGACCTGAGGGAAAGATGACTCCATCCTaGGTGGTGAGCTTGACGCCA +
Preference number: 4 (lower is better)
Translates to: SRAKTASDGGPGSPGPEGKMTPS*VVSLTP
Trigger: TGGCGTCAAGCTCACCACCCAGGATGGAGTCATCTT...TCCCTCAGGTCCCGGAGAGCCTGGACCTCCATCGGATGCTGTCTTTGCTCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGGTGTACCTCCCAGCTTaGGTCCCCTGCACATGCGTG +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGVYLPA*VPCTCV
Trigger: CACGCATGTGCAGGGGACCCAAGCTGGGAGGTACAC...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAGTGGCCTCGCTCTGCTaGTCACCAGCTACAAAGGTG +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASVASLC*SPATKV
Trigger: CACCTTTGTAGCTGGTGACCAGCAGAGCGAGGCCAC...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCAATGGGGAGGTGGCTCTaGAAGGGGATCTTCACTATC +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPMGRWL*KGIFTI
Trigger: GATAGTGAAGATCCCCTTCCAGAGCCACCTCCCCAT...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCCTCTCAGGCACCGGCTaGTCGTTCACTGCCGTCCAG +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSLSGTG*SFTAVQ
Trigger: CTGGACGGCAGTGAACGACCAGCCGGTGCCTGAGAG...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp GTATACTTCCTGCCTGGCTCCACATGGGCATCCGTGAAGGTGGTGCTGTCAGCGAAAGACAGCATCCGATaGAGGTCCAGGCTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: VYFLPGSTWASVKVVLSAKDSIR*RSRLSG
Trigger: CCCGGAGAGCCTGGACCTCCATCGGATGCTGTCTTT...CGCTGACAGCACCACCTTCACGGATGCCCATGTGGAGCCAGGCAGGAAGTATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCGCCCAGGGGGTCTCATaGGGTCCCGAGCAAAGACAG +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFAQGVS*GPEQRQ
Trigger: CTGTCTTTGCTCGGGACCCCATGAGACCCCCTGGGC...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCTGGCACGGGAGCCACTaGAGACTGTCTGAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: KALAAPLESLESRRWRLPWHGSH*RLSELH
Trigger: GTGCAGCTCAGACAGTCTCCAGTGGCTCCCGTGCCA...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGCTGAAGTGGTATTCGTaGCCGGGGAGGATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGLKWYS*PGRMPR
Trigger: CCTGGGCATCCTCCCCGGCCACGAATACCACTTCAG...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCGGGCCATGCCCACCTTaGAGCCAGAACCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KALAAPLESLESRRWRLPGPCPP*SQNLFL
Trigger: GAGGAAGAGGTTCTGGCTCCAAGGTGGGCATGGCCC...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCTATCCCTGCTTGGTCTaGAGACCTATCCTTCACCCT +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVYPCLV*RPILHP
Trigger: AGGGTGAAGGATAGGTCTCCAGACCAAGCAGGGATA...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCGGCACCACTCAGGGCTaGGGACCACCATCCTACCCA +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSGTTQG*GPPSYP
Trigger: TGGGTAGGATGGTGGTCCCCAGCCCTGAGTGGTGCC...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCTGGCAGAGCCGAGGTaGCGGGCTTCTGCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCLAEPR*RASAQS
Trigger: ACTTTGAGCAGAAGCCCGTCACCTCGGCTCTGCCAG...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGGACAGTGAGTCTCACTaGGCAAGCGGCCTCTCCGTA +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGDSESH*ASGLSV
Trigger: TACGGAGAGGCCGCTTGCTCAGTGAGACTCACTGTC...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTAGCTGGAGATGGTGTTaGTGTACTGTGCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: ALGTASILGIGFPGQCRCSWRWC*CTVPSC
Trigger: ACAAGATGGCACAGTACATCAACACCATCTCCAGCT...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCTCAGCACTTGTGGACTaGAGGTCTTTATCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LWAQPPSLGLASRASAGVSALVD*RSLSFP
Trigger: TGGGAAGGATAAAGACCTTCAGTCCACAAGTGCTGA...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCGTCCCAGGTCACTGGTaGGGGTACAGGAGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCVPGHW*GYRRVW
Trigger: CCACACTCTCCTGTACCCTCACCAGTGACCTGGGAC...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTCCGGCTTCCCAGCCTTaGCCACCAGTGGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPPASQP*PPVALS
Trigger: TGAGAGAGCCACTGGTGGTCAAGGCTGGGAAGCCGG...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCCCACTGGAGACTGTCTaGGCTGCACAGCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSPLETV*AAQLHH
Trigger: GTGGTGGAGCTGTGCAGCTCAGACAGTCTCCAGTGG...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCATGCAGGTGTCGGAAGTaGAGCTTCAAGGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASCRCRK*SFKGPG
Trigger: TCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCA...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAACCCCTGGAATCTCTTaGATCCAGGAGGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASTPGIS*IQEVEA
Trigger: AGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGT...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCACCTGGCCCATCTGCTaGTCCCATTCCTTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFTWPIC*SHSLEA
Trigger: GGCCTCCAAGGAATGGGATCAGCAGATGGGCCAGGT...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCTACTCCAAGCCTCCCTaGACCATCTCCATAACCCAT +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPYSKPP*TISITH
Trigger: ATGGGTTATGGAGATGGTTCAGGGAGGCTTGGAGTA...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp AGGTCAGTGCTGTACACCGCGGGGTTTCCTTCCAGGCTGCGGTCATTCTTGAACTTGATCTGCAGCACGTaGTCCTTGCTGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RSVLYTAGFPSRLRSFLNLICST*SLLPGL
Trigger: CAGCCCTGGCAGCAAGGAGCACGTGCTGCAGATCAA...GTTCAAGAATGACCGCAGCCTGGAAGGAAACCCCGCGGTGTACAGCACTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCACGCATTTACTGCTGTaGAGCGGTACAGATCCGTGT +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPTHLLL*SGTDPC
Trigger: ACACGGATCTGTACCGCTGCACAGCAGTAAATGCGT...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCTCCTGCGGTTCCCTGTaGCTCTTCCGATTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPSCGSL*LFRFFR
Trigger: TCGGAAGAATCGGAAGAGGCACAGGGAACCGCAGGA...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGAGCAGCTGCCATATCTaGTCAAGGTCCATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQSSCHI*SRSIFF
Trigger: GAAAAAGATGGACCTTGAGCAGATATGGCAGCTGCT...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACGTAGTCCTTCCTGTCTaGTGTCATCAGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDVVLPV*CHQQLP
Trigger: TGGCAGCTGCTGATGACAGCAGACAGGAAGGACTAC...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTGGTGTTGATGTACTGTaGCATCTTGTCCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: ALGTASILGIGFPGQCRCGVDVL*HLVLLF
Trigger: GAACAGGAGGACAAGATGGCACAGTACATCAACACC...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TTCATTAACTGCTGTCACCCGCACGAAGTAGCCCTCTCCAGGCCGAAGCCCCTTAAGACTGCGTCACCCTaGTCCTCACAGTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: FINCCHPHEVALSRPKPLKTASP*SSQWVS
Trigger: GGAGACCCACTGTGAGGAGCAGGGTGACGCAGTCTT...AAGGGGCTTCGGCCTGGAGAGGGCTACTTCGTGCGGGTGACAGCAGTTAATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTCCGGAAATGCCAGGCTaGACTAGGGCAGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPPEMPG*TRAGAG
Trigger: TCCAGCCCCTGCCCTAGTGCAGCCTGGCATTTCCGG...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTAGCCGGTGCCGGAAATaGCAGGCTGCACTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPSRCRK*QAALGQ
Trigger: CTGCCCTAGTGCAGCCTGGCATTTCCGGCACCGGCT...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCATGGAGAAACTGCCAGTaGCAGGCTTGTATCTGGATG +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPWRNCQ*QACIWM
Trigger: CATCCAGATACAAGCCTGGCACTGGCAGTTTCTCCA...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCACATCCTTGGAGAAACTaGCAGTGCCAGGCTTGTATC +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPHPWRN*QCQACI
Trigger: GATACAAGCCTGGCACTGGCAGTTTCTCCAAGGATG...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCCAGCTTGGGTCCCCTaGACATGCGTGATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KALAAPLESLESRRWRLPPAWVP*TCVMKR
Trigger: CCTCTTCATCACGCATGTGCAGGGGACCCAAGCTGG...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCGGCTTGTCTATGACTTaGAGAGTGAGCTCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPGLSMT*RVSSAC
Trigger: GCAGGCCGAGCTCACTCTGCAAGTCATAGACAAGCC...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAGGAGACTGTCTGAGCTaGACAGCTCCACCACATACC +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASGDCLS*TAPPHT
Trigger: GGTATGTGGTGGAGCTGTGCAGCTCAGACAGTCTCC...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGGCCTCCTTCATTAACTaGTGTCACCCGCACGAAGTA +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVASFIN*CHPHEV
Trigger: TACTTCGTGCGGGTGACAGCAGTTAATGAAGGAGGC...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp GCTGGTGTCCGAGGGTTTGCTGGCCCCCAGCTCATTCTTGGCCACCACCCTGAAGTAACAGGCATGGCTTaGACTAATGTGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: AGVRGFAGPQLILGHHPEVTGMA*TNVSRA
Trigger: TGCCCTGGACACATTAGTGCAAGCCATGCCTGTTAC...TTCAGGGTGGTGGCCAAGAATGAGCTGGGGGCCAGCAAACCCTCGGACACCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp GCTGGTGTTCGATCTGTCTGTGACTTGGAGATTCCTCACCAGCCCAGGGGGTCTTGGTGTCCGAGGGTTTaGTGGCCCCCAGCTCATTCT +
Preference number: 4 (lower is better)
Translates to: AGVRSVCDLEIPHQPRGSWCPRV*WPPAHS
Trigger: AGAATGAGCTGGGGGCCAGCAAACCCTCGGACACCA...AGACCCCCTGGGCTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCGCTCCTTTCCTTCCCTaGTGCTCCCCAGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSAPFLP*CSPVLQ
Trigger: CTGGAGGACTGGGGAGCAGCAGGGAAGGAAAGGAGC...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGTGCCAGGACCTCCTaGCCCATTGCTGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPGARTS*PIAVSS
Trigger: GCTGGAGACAGCAATGGGGCAGGAGGTCCTGGCACC...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTTCTGCCAATACCCCCTaGTGCTCTGTGACCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLSANTP*CSVTCC
Trigger: ACAGCAGGTCACAGAGCAGCAGGGGGTATTGGCAGA...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCCACCATCTGAATGGTaGCCTCCCCTAGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: KALAAPLESLESRRWRLPPPSEW*PPLGSM
Trigger: CATGGACCCTAGGGGAGGGCACCATTCAGATGGTGG...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTCCCAGAACTGTCTTaGCATTCTTTGACATCTGGT +
Preference number: 4 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQVPELS*HSLTSG
Trigger: ACCAGATGTCAAAGAATGGCAAGACAGTTCTGGGAC...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCCTGAGCCTACCCTTCTaGCTCCCAAAAGTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPLSLPF*LPKVSP
Trigger: GGGACTCACTTTTGGGAGGCAGAAGGGTAGGCTCAG...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTGCGGCATCTTTCTCCTaGAGAGAACCGGAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLAASFS*REPEAL
Trigger: CAGAGCTTCCGGTTCTCTGCAGGAGAAAGATGCCGC...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCCTGCATCAACAGAACTaGCCCTTCCAGGACTTGAAC +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPLHQQN*PFQDLN
Trigger: GTTCAAGTCCTGGAAGGGGCAGTTCTGTTGATGCAG...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp GTATACTTCCTGCCTGGCTCCACATGGGCATCCGTGAAGGTGGTGCTGTCAGCGCTCACTCCAGGGATGTaGGACTTCCGGAGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: VYFLPGSTWASVKVVLSALTPGM*DFRSFP
Trigger: AGGAAAGCTCCGGAAGTCCCACATCCCTGGAGTGAG...CGCTGACAGCACCACCTTCACGGATGCCCATGTGGAGCCAGGCAGGAAGTATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCACCTTGCTGCCAGGGCTaGAGGAGATCTTGTACTTGC +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASPCCQG*RRSCTC
Trigger: GCAAGTACAAGATCTCCTCCAGCCCTGGCAGCAAGG...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGTGTGGTCAGCACTTGTaGACTGAAGGTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQCGQHL*TEGLYP
Trigger: AGGATAAAGACCTTCAGTCCACAAGTGCTGACCACA...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCTGGCCCATGGGGCCTTaGGCATCCTTGGAGAAACTG +
Preference number: 4 (lower is better)
Translates to: KALAAPLESLESRRWRLPWPMGP*ASLEKL
Trigger: CAGTTTCTCCAAGGATGCCCAAGGCCCCATGGGCCA...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACAAGATGACTCCATCCTaGGTGGTGAGCTTGACGCCA +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDKMTPS*VVSLTP
Trigger: TGGCGTCAAGCTCACCACCCAGGATGGAGTCATCTT...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCGTGTACCTCCCAGCTTaGGTCCCCTGCACATGCGTG +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSVYLPA*VPCTCV
Trigger: CACGCATGTGCAGGGGACCCAAGCTGGGAGGTACAC...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCAAAGACAGCATCCGATaGAGGTCCAGGCTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: KALAAPLESLESRRWRLPKDSIR*RSRLSG
Trigger: CCCGGAGAGCCTGGACCTCCATCGGATGCTGTCTTT...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCATGTGTCCAGGGCACTaGGCTGGCTCTGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFMCPGH*AGSGLL
Trigger: AAGGAGGCCAGAGCCAGCCCAGTGCCCTGGACACAT...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCGCAAGTCCTTGGTGCTaGAGTCCACGAGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPASPWC*SPRGTW
Trigger: CCAAGTTCCTCGTGGACTCCAGCACCAAGGACTTGC...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACAGGTCACCTCAGGCATaGGCATGGCTTCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDRSPQA*AWLQRR
Trigger: TCTCCTTTGAAGCCATGCCCATGCCTGAGGTGACCT...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCATTGAGTGACTTAGCTTaGAGCCAGGAGGTGGAATGC +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPLSDLA*SQEVEC
Trigger: GCATTCCACCTCCTGGCTCCAAGCTAAGTCACTCAA...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCATATCTGCTTTCCTCTTaGCCAGGACCCTACAGGATC +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPYLLSS*PGPYRI
Trigger: GATCCTGTAGGGTCCTGGCCAAGAGGAAAGCAGATA...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCACCCCCTTTCCCTACTTaGAGCATCCCCTCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASPPFPT*SIPSVH
Trigger: ATGGACAGAGGGGATGCTCCAAGTAGGGAAAGGGGG...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCGCCCTACTTAGCCAGTaGCTTCTGGCATCCACCCCC +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSALLSQ*LLASTP
Trigger: GGGGGTGGATGCCAGAAGCCACTGGCTAAGTAGGGC...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCGCTCTGGACCATCCTTaGAGTTCGTGTCACCCTCTG +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPALDHP*SSCHPL
Trigger: CAGAGGGTGACACGAACTCCAAGGATGGTCCAGAGC...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTTTCCCTGGCTCGCTCTaGACCATCCTTGGAGTTCGT +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLFPGSL*TILGVR
Trigger: ACGAACTCCAAGGATGGTCCAGAGCGAGCCAGGGAA...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCCTTGGCTAAACCCCTaGTTTTCCCAATCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDPWLNP*FSQSGA
Trigger: GGCTCCTGATTGGGAAAACCAGGGGTTTAGCCAAGG...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp AGCCTGCCGTCTCTCCACCACGTAGCACTCTACAGTCCGGCCCCCATTGTCCCTACTTGCTGGAATCACTaGGGTCACCTTTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: SLPSLHHVALYSPAPIVPTCWNH*GHLWSS
Trigger: AGAACTCCAAAGGTGACCTCAGTGATTCCAGCAAGT...AGGGACAATGGGGGCCGGACTGTAGAGTGCTACGTGGTGGAGAGACGGCAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCGACAGTGAGTCTCACTaGGCAAGCGGCCTCTCCGTA +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSDSESH*ASGLSV
Trigger: TACGGAGAGGCCGCTTGCTCAGTGAGACTCACTGTC...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTCCATCAGCTCCTTCCTaGGGTCTTCCTGCGGTTCCC +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPPSAPS*GLPAVP
Trigger: GGGAACCGCAGGAAGACCTCAGGAAGGAGCTGATGG...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCAAGCTGGAGATGGTGTTaGTGTACTGTGCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPSWRWC*CTVPSC
Trigger: ACAAGATGGCACAGTACATCAACACCATCTCCAGCT...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp GCTGGTGTCCGAGGGTTTGCTGGCCCCCAGCTCATTCTTGGCCACCACCCTGAAAGCTGGAGATGGTGTTaGTGTACTGTGCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: AGVRGFAGPQLILGHHPESWRWC*CTVPSC
Trigger: ACAAGATGGCACAGTACATCAACACCATCTCCAGCT...TTCAGGGTGGTGGCCAAGAATGAGCTGGGGGCCAGCAAACCCTCGGACACCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCTGCTCTGAGAATCCTTaGGATCCAGCTCCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPCSENP*DPAPSQ
Trigger: TTGACTTGGAGCTGGATCTCAAGGATTCTCAGAGCA...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCATGCTCTGAGAATCCTTaGGATCCAGCTCCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPCSENP*DPAPSQ
Trigger: TTGACTTGGAGCTGGATCTCAAGGATTCTCAGAGCA...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCGCTTGGTTTGGTTGTTaGAGCCATAGGGGATCATCT +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPAWFGC*SHRGSS
Trigger: AGATGATCCCCTATGGCTTCAACAACCAAACCAAGC...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGTCCCAGGTCACTGGTaGGGGTACAGGAGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPVPGHW*GYRRVW
Trigger: CCACACTCTCCTGTACCCTCACCAGTGACCTGGGAC...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCGCCCTATGGCAATCCTaGACCTCCATGGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCALWQS*TSMGPC
Trigger: ACAAGGCCCCATGGAGGTTCAGGATTGCCATAGGGC...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCAGGGAGCCACAGCTGTaGCCCGGAACTCATACTGAC +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFREPQL*PGTHTD
Trigger: GTCAGTATGAGTTCCGGGTCACAGCTGTGGCTCCCT...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCAGGGAGCCACAGCTGTaGCCCGGAACTCATACTGAC +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSREPQL*PGTHTD
Trigger: GTCAGTATGAGTTCCGGGTCACAGCTGTGGCTCCCT...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp AGGTCAGTGCTGTACACCGCGGGGTTTCCTTCCAGGCTGCGGTCATTCTTGAACCAGCCCAGCTCAGAGTaGTGCTGGTGTTCGATCTGT +
Preference number: 4 (lower is better)
Translates to: RSVLYTAGFPSRLRSFLNQPSSE*CWCSIC
Trigger: ACAGATCGAACACCAGCATCACTCTGAGCTGGGCTG...GTTCAAGAATGACCGCAGCCTGGAAGGAAACCCCGCGGTGTACAGCACTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGGTAGAGACCACTGTCTaGGAGTCCAGCCACAGGGAT +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGVETTV*ESSHRD
Trigger: ATCCCTGTGGCTGGACTCTCAGACAGTGGTCTCTAC...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp TCGGAAGGTATACTTCCTGCCTGGCTCCACATGGGCATCCGTGAAGGTGGTGCTGTAGAGACCACTGTCTaGGAGTCCAGCCACAGGGAT +
Preference number: 4 (lower is better)
Translates to: SEGILPAWLHMGIREGGAVETTV*ESSHRD
Trigger: ATCCCTGTGGCTGGACTCTCAGACAGTGGTCTCTAC...AGCACCACCTTCACGGATGCCCATGTGGAGCCAGGCAGGAAGTATACCTTCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGCAGGCTGTCATCCTGTaGAATCTCTATCTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVQAVIL*NLYLLS
Trigger: GGAAAGCAGATAGAGATTTCACAGGATGACAGCCTG...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGATCTGTTTCATCCATTaGCCCGATTTCCCTGGAACC +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVICFIH*PDFPGT
Trigger: GGTTCCAGGGAAATCGGGTCAATGGATGAAACAGAT...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCACCTGCCTCATCCCCTaGACTGATTTTTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: SRASAGVGSEASRVQDHPTCLIP*TDFSRT
Trigger: AGTTCTGGAAAAATCAGTTCAGGGGATGAGGCAGGT...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTCTCCCGCTTCCTGTCTaGTCCCTCTTCCCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPLPLPV*SLFPVS
Trigger: GGAAACGGGGAAGAGGGAGCAGACAGGAAGCGGGAG...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCCTTCCGGAGCTTTCCTaGCATAGTTCTGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPLPELS*HSSASS
Trigger: AGAGGAGGCAGAACTATGGCAGGAAAGCTCCGGAAG...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGTCCTGCGGTTCCCTGTaGCTCTTCCGATTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGSCGSL*LFRFFR
Trigger: TCGGAAGAATCGGAAGAGGCACAGGGAACCGCAGGA...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCACACGGTAGTCGACGATaGCATACTTCAAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPHGSRR*HTSSRS
Trigger: AGATCTGCTTGAAGTATGGCATCGTCGACTACCGTG...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCAGCCGGCGCAGACAGTaGTTGGTTTGGTTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPSRRRQ*LVWLLK
Trigger: CTTCAACAACCAAACCAAGCACTGTCTGCGCCGGCT...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACGGTACATTCAAAGACTaGGTCACCCTGCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDGTFKD*VTLLLT
Trigger: TGTGAGGAGCAGGGTGACGCAGTCTTTGAATGTACC...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp GGAGCCACTGGAGACTGTCTGAGCTGCACAGCTCCACCACATACCCCTGGGCTTCATAGATGTCCAACCTaGCGTCTTTGCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: GATGDCLSCTAPPHTPGLHRCPT*RLCHFS
Trigger: GGAGAAGTGGCAAAGACGGCAGGTTGGACATCTATG...AAGCCCAGGGGTATGTGGTGGAGCTGTGCAGCTCAGACAGTCTCCAGTGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCTTGGAGAAACTaGCAGTGCCAGGCTTGTATC +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDHPWRN*QCQACI
Trigger: GATACAAGCCTGGCACTGGCAGTTTCTCCAAGGATG...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp GGAGCCACTGGAGACTGTCTGAGCTGCACAGCTCCACCACATACCCCTGGGCTTGTGATGAAGAGGCTGTaGACGAGACCGTCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: GATGDCLSCTAPPHTPGLVMKRL*TRPSCL
Trigger: TAAGCAAGACGGTCTCGTGCACAGCCTCTTCATCAC...AAGCCCAGGGGTATGTGGTGGAGCTGTGCAGCTCAGACAGTCTCCAGTGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGGGAGACTGTCTGAGCTaGACAGCTCCACCACATACC +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGGDCLS*TAPPHT
Trigger: GGTATGTGGTGGAGCTGTGCAGCTCAGACAGTCTCC...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGTGTCCGAGGGTTTaGTGGCCCCCAGCTCATTCT +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSWCPRV*WPPAHS
Trigger: AGAATGAGCTGGGGGCCAGCAAACCCTCGGACACCA...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTAGCCAGGAGGTGGAATaGCCTCCTCCCTTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLSQEVE*PPPLFF
Trigger: GAAAAACAAGGGAGGAGGGCATTCCACCTCCTGGCT...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTAGTTGCTCTGGGGCATaGCTGTCCAGTTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLSCSGA*LSSCLP
Trigger: TGGAAGACAACTGGACAGGCATGCCCCAGAGCAACT...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCGCCAATACCCCCTGCTaGTCTGTGACCTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFANTPC*SVTCCP
Trigger: TGGACAGCAGGTCACAGAGCAGCAGGGGGTATTGGC...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCCATGCCTGCCTGGCATaGAGAGGCCCAATTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSHACLA*RGPIPG
Trigger: ACCAGGAATTGGGCCTCTGCATGCCAGGCAGGCATG...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTAGCCCCCATTATCCCTaGTTGGTCTGGAGACCTATC +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLSPHYP*LVWRPI
Trigger: GATAGGTCTCCAGACCAAGCAGGGATAATGGGGGCT...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCTGGCCTCCAGTTCTGTaGAGAAGACCACAGCATCCT +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPWPPVL*RRPQHP
Trigger: AGGATGCTGTGGTCTTCTCCACAGAACTGGAGGCCA...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCGGCCTTGGGCATCCTTaGAGAAACTGCCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCGLGHP*RNCQCQ
Trigger: CTGGCACTGGCAGTTTCTCCAAGGATGCCCAAGGCC...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGAGTGTCACGCTGTACTaGCCACAGTCCTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGSVTLY*PQSFLP
Trigger: AGGCAGGAAGGACTGTGGCCAGTACAGCGTGACACT...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp AGGTCAGTGCTGTACACCGCGGGGTTTCCTTCCAGGCTGCGGTCATTCTTGAACGCACTGGGCTGGCTCTaGCCTCCTTCATTAACTGCT +
Preference number: 4 (lower is better)
Translates to: RSVLYTAGFPSRLRSFLNALGWL*PPSLTA
Trigger: AGCAGTTAATGAAGGAGGCCAGAGCCAGCCCAGTGC...GTTCAAGAATGACCGCAGCCTGGAAGGAAACCCCGCGGTGTACAGCACTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTATGTGTCCAGGGCACTaGGCTGGCTCTGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPMCPGH*AGSGLL
Trigger: AAGGAGGCCAGAGCCAGCCCAGTGCCCTGGACACAT...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCTGTCAGCAAGTCCTTaGTGCTGGAGTCCACGAGGA +
Preference number: 4 (lower is better)
Translates to: KALAAPLESLESRRWRLPLSASP*CWSPRG
Trigger: TCCTCGTGGACTCCAGCACCAAGGACTTGCTGACAG...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTAGGTCACCTCAGGCATaGGCATGGCTTCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLRSPQA*AWLQRR
Trigger: TCTCCTTTGAAGCCATGCCCATGCCTGAGGTGACCT...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAACAGGGATCAGAAGCTaGGTGAGGCCATCCTTAGTG +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASTGIRS*VRPSLV
Trigger: CACTAAGGATGGCCTCACCCAGCTTCTGATCCCTGT...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCCTGATACGGAAGCTGTaGGCAACCTCCTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFLIRKL*ATSFPC
Trigger: GCAGGGGAAGGAGGTTGCCCACAGCTTCCGTATCAG...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTCTCCATCCTTGGGATTaGCTTCCCGGGCCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPLHPWD*LPGPVQ
Trigger: CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCATTTTCCTGGGGCTCTaGGCACAGCCTCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: KALAAPLESLESRRWRLPIFLGL*AQPPSL
Trigger: CAAGGATGGAGGCTGTGCCCAGAGCCCCAGGAAAAT...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCCTTGGAGCCAGGAGGTaGAATGCCCTCCTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSLGARR*NALLPC
Trigger: ACAAGGGAGGAGGGCATTCCACCTCCTGGCTCCAAG...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCAAGGCCATCCCTGTCTaGGCTGGCTATGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFKAIPV*AGYVLE
Trigger: CTCCAGCACATAGCCAGCCCAGACAGGGATGGCCTT...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCACTCCAGGCCCATGGTaGGCCCCAGTTTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSTPGPW*APVFLR
Trigger: CCTCAGAAAAACTGGGGCCCACCATGGGCCTGGAGT...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGTCCATGCCTGCCTaGCATGCAGAGGCCCAATTC +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPGSMPA*HAEAQF
Trigger: GAATTGGGCCTCTGCATGCCAGGCAGGCATGGACCC...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTAGGCCACCATCTGAATaGTGCCCTCCCCTAGGGTCC +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPRPPSE*CPPLGS
Trigger: GGACCCTAGGGGAGGGCACCATTCAGATGGTGGCCT...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGCTGAACCCGCTTCCCTaGAATCCTGTAAACCACCCC +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGLNPLP*NPVNHP
Trigger: GGGGTGGTTTACAGGATTCCAGGGAAGCGGGTTCAG...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTTGGCTTTATGGCCTCTaGGTCCAGCCTCATGTCCTA +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLWLYGL*VQPHVL
Trigger: TAGGACATGAGGCTGGACCCAGAGGCCATAAAGCCA...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCTGACCTGTGACCCATaGCTTTATGGCCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: KALAAPLESLESRRWRLPLTCDP*LYGLWV
Trigger: GACCCAGAGGCCATAAAGCCATGGGTCACAGGTCAG...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCAAGCCTGGTTTCCCTaGCTCGCTCTGGACCATCCT +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCQAWFP*LALDHP
Trigger: AGGATGGTCCAGAGCGAGCCAGGGAAACCAGGCTTG...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCCATCTGGTTTTCCCTTaGCACCAGCAGCCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSHLVFP*HQQPPR
Trigger: CCTCGGAGGCTGCTGGTGCCAAGGGAAAACCAGATG...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335211.9
3UTR CAA 72 bp GCTCAGAGTGATGCTGGTGTTCGATCTGTCTGTGACTaGGAGATTCCTCACCAGCCCAGGGGGTCTCATGGG +
Preference number: 4 (lower is better)
Translates to: AQSDAGVRSVCD*EIPHQPRGSHG
Trigger: CCCATGAGACCCCCTGGGCTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGCATCACTCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR TCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCACTCGCCAGCCCCCTCTaGGGTCACAGCCCGCACTCG +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPLASPL*GHSPHS
Trigger: CGAGTGCGGGCTGTGACCTCAGAGGGGGCTGGCGAG...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCAGCCCAGCTCAGAGTaGTGCTGGTGTTCGATCTGT +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCQPSSE*CWCSIC
Trigger: ACAGATCGAACACCAGCATCACTCTGAGCTGGGCTG...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGTGGCCGTGTAGGTGGTaGCTGGCACGGTGCCCACAT +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQEWPCRW*LARCPH
Trigger: ATGTGGGCACCGTGCCAGTCACCACCTACACGGCCA...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGAAGAAACCCATATGGTaGGGGTCCAGGAGGTTCGCT +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGKKPIW*GSRRFA
Trigger: AGCGAACCTCCTGGACCCTCACCATATGGGTTTCTT...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCACCCCTGGAATCTCTTaGATCCAGGAGGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFTPGIS*IQEVEA
Trigger: AGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGT...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTATCTGCCTCCTGCAGTaGGTCTTCAGCTTTGATCTC +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLICLLQ*VFSFDL
Trigger: GAGATCAAAGCTGAAGACTCACTGCAGGAGGCAGAT...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCATCCATCAGGACCACCTaGGCCATTTTTAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASSIRTT*AIFKTG
Trigger: GCCAGTCTTAAAAATGGCTCAGGTGGTCCTGATGGA...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCAACCTGCCTCATTCCATaGCAAAATGTACCCAGAATC +
Preference number: 4 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPTCLIP*QNVPRI
Trigger: GATTCTGGGTACATTTTGTCATGGAATGAGGCAGGT...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCTCCTATTCCAGCCAGTaGGCCTGGTACTCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCSYSSQ*AWYSKP
Trigger: AGGCTTGGAGTACCAGGCTCACTGGCTGGAATAGGA...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTTCTGCCTCCCAAAAGTaGGTCCCCACCTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPSASQK*VPTSLR
Trigger: TCTCAGGGAGGTGGGGACTCACTTTTGGGAGGCAGA...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGCTTGCCCAGGATACCTaGGTCCTCTGCATCAACAGA +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGLAQDT*VLCINR
Trigger: TCTGTTGATGCAGAGGACTCAGGTATCCTGGGCAAG...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp AGTGATGCTGGTGTTCGATCTGTCTGTGACTTGGAGATTCCTCACCAGCCCAGGATCTCCTCCACCAGCTaGCAGATGCTCACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SDAGVRSVCDLEIPHQPRISSTS*QMLTPG
Trigger: CCCTGGAGTGAGCATCTGGCAGCTGGTGGAGGAGAT...CCTGGGCTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGCATCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCTCCGTACGCATTTACTaGTGTGCAGCGGTACAGATC +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPSVRIY*CAAVQI
Trigger: GATCTGTACCGCTGCACAGCAGTAAATGCGTACGGA...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAGCAGCTGCCATATCTaGTCAAGGTCCATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVSSCHI*SRSIFF
Trigger: GAAAAAGATGGACCTTGAGCAGATATGGCAGCTGCT...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCTCCTTCTTCATCTCCTaGAGCCTGCGCAACATGCCA +
Preference number: 4 (lower is better)
Translates to: KALAAPLESLESRRWRLPSFFIS*SLRNMP
Trigger: TGGCATGTTGCGCAGGCTGCAGGAGATGAAGAAGGA...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp GTATACTTCCTGCCTGGCTCCACATGGGCATCCGTGAAGGTGGTGCTGTCAGCGGGTACATTCAAAGACTaGGTCACCCTGCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: VYFLPGSTWASVKVVLSAGTFKD*VTLLLT
Trigger: TGTGAGGAGCAGGGTGACGCAGTCTTTGAATGTACC...CGCTGACAGCACCACCTTCACGGATGCCCATGTGGAGCCAGGCAGGAAGTATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGCCGGAAATGCCAGGCTaGACTAGGGCAGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQEPEMPG*TRAGAG
Trigger: TCCAGCCCCTGCCCTAGTGCAGCCTGGCATTTCCGG...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCATGGAGAAACTGCCAGTaGCAGGCTTGTATCTGGATG +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASWRNCQ*QACIWM
Trigger: CATCCAGATACAAGCCTGGCACTGGCAGTTTCTCCA...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp ACATGGCACGGGAGCCACTGGAGACTGTCTGAGCTGCACAGCTCCACCACATACTGGAGAAACTGCCAGTaGCAGGCTTGTATCTGGATG +
Preference number: 4 (lower is better)
Translates to: TWHGSHWRLSELHSSTTYWRNCQ*QACIWM
Trigger: CATCCAGATACAAGCCTGGCACTGGCAGTTTCTCCA...GTATGTGGTGGAGCTGTGCAGCTCAGACAGTCTCCAGTGGCTCCCGTGCCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCGGCTTGTCTATGACTTaGAGAGTGAGCTCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCGLSMT*RVSSAC
Trigger: GCAGGCCGAGCTCACTCTGCAAGTCATAGACAAGCC...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGGCCGGGGCCCCGAGGTaGTGTCCATGTCAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQEAGAPR*CPCQCD
Trigger: ATCACACTGACATGGACAGCACCTCGGGGCCCCGGC...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCGTAACAGGCATGGCTTaGACTAATGTGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPVTGMA*TNVSRA
Trigger: TGCCCTGGACACATTAGTGCAAGCCATGCCTGTTAC...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGGGTGGCAGTGCTGACTaGCTGGCCCAGCGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQEGGSAD*LAQRVL
Trigger: GAGAACACGCTGGGCCAGGCAGTCAGCACTGCCACC...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTACCATCTCTAAAGCCTaGCTCACCCCCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPTISKA*LTPWPC
Trigger: ACAGGGCCAGGGGGTGAGGCAGGCTTTAGAGATGGT...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCCGCTATAATCTGCCTTaGTCCCTGAACCCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSRYNLP*SLNPLP
Trigger: GGGAAGCGGGTTCAGGGAGCAAGGCAGATTATAGCG...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp AGGTCAGTGCTGTACACCGCGGGGTTTCCTTCCAGGCTGCGGTCATTCTTGAACTGGCCTCCAGTTCTGTaGAGAAGACCACAGCATCCT +
Preference number: 4 (lower is better)
Translates to: RSVLYTAGFPSRLRSFLNWPPVL*RRPQHP
Trigger: AGGATGCTGTGGTCTTCTCCACAGAACTGGAGGCCA...GTTCAAGAATGACCGCAGCCTGGAAGGAAACCCCGCGGTGTACAGCACTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGTATTTGTCACTGGGGTaGAGTAGCCGGTGCCGGAAA +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGYLSLG*SSRCRK
Trigger: TTTCCGGCACCGGCTACTCCACCCCAGTGACAAATA...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGCCTTGACCACCAGTaGCTCTCTCAGTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASSLDHQ*LSQFLC
Trigger: ACAGAGAAACTGAGAGAGCCACTGGTGGTCAAGGCT...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCCTCCATGGGGCCTTGTaGGGGATCAGGCTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFLHGAL*GIRLVY
Trigger: ATAGACAAGCCTGATCCCCCACAAGGCCCCATGGAG...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCAATCCTGAACCTCCATaGGGCCTTGTGGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFNPEPP*GLVGDQ
Trigger: CTGATCCCCCACAAGGCCCCATGGAGGTTCAGGATT...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGACAGGGATCAGAAGCTaGGTGAGGCCATCCTTAGTG +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGTGIRS*VRPSLV
Trigger: CACTAAGGATGGCCTCACCCAGCTTCTGATCCCTGT...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGTGCACCAGGGCTGGCTaGTGTCCGAGGGTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQECTRAG*CPRVCW
Trigger: CCAGCAAACCCTCGGACACCAGCCAGCCCTGGTGCA...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCATTTTCCTGGGGCTCTaGGCACAGCCTCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFIFLGL*AQPPSL
Trigger: CAAGGATGGAGGCTGTGCCCAGAGCCCCAGGAAAAT...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTCTTGGAGCCAGGAGGTaGAATGCCCTCCTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPLGARR*NALLPC
Trigger: ACAAGGGAGGAGGGCATTCCACCTCCTGGCTCCAAG...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCACTTGCTGCACCCCTaGAATCTCTTGAATCCAGGA +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLHLLHP*NLLNPG
Trigger: TCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTG...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCTTTCCCTGGGAAGAGTaGCTCTGCTTCCCTCTGCTA +
Preference number: 4 (lower is better)
Translates to: KALAAPLESLESRRWRLPFPWEE*LCFPLL
Trigger: TAGCAGAGGGAAGCAGAGCCACTCTTCCCAGGGAAA...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTCCTACAGGATCAGACTaGCATCCCTGCAGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPPTGSD*HPCRSL
Trigger: GAGCGACCTGCAGGGATGCCAGTCTGATCCTGTAGG...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCCTACAACCAGCACCATaGCCGGACCCCATTTCTCCT +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFLQPAP*PDPISP
Trigger: AGGAGAAATGGGGTCCGGCCATGGTGCTGGTTGTAG...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCGTGACTCAGGGTGCCTaGTATCATCCCTATAACCAG +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPVTQGA*YHPYNQ
Trigger: CTGGTTATAGGGATGATACCAGGCACCCTGAGTCAC...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGGCTGATCCCATTCCTTaGAGGCCTCCTGAACCATCT +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGADPIP*RPPEPS
Trigger: AGATGGTTCAGGAGGCCTCCAAGGAATGGGATCAGC...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCAGCCCCCAAGATCTTTaGTGGAGCCTCGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFSPQDL*WSLAHL
Trigger: CAGATGAGCGAGGCTCCACCAAAGATCTTGGGGGCT...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAGCATCTATGCTGCCTTaGCTAAACCCCTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASASMLP*LNPWFS
Trigger: GGAAAACCAGGGGTTTAGCCAAGGCAGCATAGATGC...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
3UTR CAA 72 bp TTAGCTTGGAGCCAGGAGGTGGAATGCCCTCCTCCCTaGTTTTTCTTCCCCAAGGACTTCACGTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LAWSQEVECPPP*FFFPKDFTSSW
Trigger: CCAGGAGGACGTGAAGTCCTTGGGGAAGAAAAACAAGGGAGGAGGGCATTCCACCTCCTGGCTCCAAGCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCGCTTGGTTTGGTTGTTaGAGCCATAGGGGATCATCT +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPAWFGC*SHRGSS
Trigger: AGATGATCCCCTATGGCTTCAACAACCAAACCAAGC...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCTCAGCACTTGTGGACTaGAGGTCTTTATCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPSALVD*RSLSFP
Trigger: TGGGAAGGATAAAGACCTTCAGTCCACAAGTGCTGA...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCATCAGCACTTGTGGACTaGAGGTCTTTATCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASSALVD*RSLSFP
Trigger: TGGGAAGGATAAAGACCTTCAGTCCACAAGTGCTGA...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTTCTCCTGGAACCCCTaGGCCATAGCTATAACCAGC +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSFSWNP*AIAITS
Trigger: GCTGGTTATAGCTATGGCTCAGGGGTTCCAGGAGAA...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCAGGCCCTGGAAGTTCTaGTCCATCCTCATAACCCAG +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFRPWKF*SILITQ
Trigger: CTGGGTTATGAGGATGGATCAGAACTTCCAGGGCCT...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGATCCTCCCTATAACCTaGCCCCATTTCCCCATAACC +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGILPIT*PHFPIT
Trigger: GGTTATGGGGAAATGGGGTCAGGTTATAGGGAGGAT...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGCCCCTTCCAGGACTTaGACCTTTGCTATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPAPSRT*TFAIQG
Trigger: TCCCTGGATAGCAAAGGTTCAAGTCCTGGAAGGGGC...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGCTCCCGCTTCCTGTCTaGTCCCTCTTCCCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQELPLPV*SLFPVS
Trigger: GGAAACGGGGAAGAGGGAGCAGACAGGAAGCGGGAG...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGACGCATTTACTGCTGTaGAGCGGTACAGATCCGTGT +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGTHLLL*SGTDPC
Trigger: ACACGGATCTGTACCGCTGCACAGCAGTAAATGCGT...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTTTCCTGAGGTCTTCCTaGGGTTCCCTGTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPFLRSS*GSLCLF
Trigger: GAAGAGGCACAGGGAACCGCAGGAAGACCTCAGGAA...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGGCAGCCTGCGCAACATaGCACGGTAGTCGACGATGC +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQEAACAT*HGSRRC
Trigger: GCATCGTCGACTACCGTGGCATGTTGCGCAGGCTGC...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAGGTGTTGATGTACTGTaGCATCTTGTCCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: PSLGLASRASAGVGSEASGVDVL*HLVLLF
Trigger: GAACAGGAGGACAAGATGGCACAGTACATCAACACC...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGCCACTTCTCCTGCTCTaGAGTTTGTGGTCAGCACTT +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGPLLLL*SLWSAL
Trigger: AAGTGCTGACCACAAACTGCAGAGCAGGAGAAGTGG...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000437879.6
CDS-3UTR GCA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCATAGATGTCCAACCTaGCGTCTTTGCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: KALAAPLESLESRRWRLPHRCPT*RLCHFS
Trigger: GGAGAAGTGGCAAAGACGGCAGGTTGGACATCTATG...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGCATCCTTGGAGAAACTaGCAGTGCCAGGCTTGTATC +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGHPWRN*QCQACI
Trigger: GATACAAGCCTGGCACTGGCAGTTTCTCCAAGGATG...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGAGAGTGAGCTCGGCCTaGACAGAGCCTCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQERVSSA*TEPPSL
Trigger: GAGTGAGGGAGGCTCTGTGCAGGCCGAGCTCACTCT...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCGGAAGGTATACTTCCTaGCTGGCTCCACATGGGCAT +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFGRYTS*LAPHGH
Trigger: ATGCCCATGTGGAGCCAGGCAGGAAGTATACCTTCC...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCGGAAGGTATACTTCCTaGCTGGCTCCACATGGGCAT +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSGRYTS*LAPHGH
Trigger: ATGCCCATGTGGAGCCAGGCAGGAAGTATACCTTCC...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTCAGCAAGTCCTTGGTaGTGGAGTCCACGAGGAACT +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSSASPW*WSPRGT
Trigger: AGTTCCTCGTGGACTCCAGCACCAAGGACTTGCTGA...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGGGCTCTGCTTCCCTCTaGTACTGGAAAGCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQEGSASL*YWKALA
Trigger: GGCGAGGGCTTTCCAGTAGCAGAGGGAAGCAGAGCC...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCTGGGAAGAGTGGCTCTaGTTCCCTCTGCTACTGGAA +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCWEEWL*FPLLLE
Trigger: TTCCAGTAGCAGAGGGAAGCAGAGCCACTCTTCCCA...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTTCTCTGCCACGATCTTaGTGTTGTTTTTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLSLPRS*CCFSGR
Trigger: CCTCCCAGAAAAACAACAGCAAGATCGTGGCAGAGA...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCCACTGTTGCTGTCTCTaGCACGATCTTGCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPHCCCL*HDLAVV
Trigger: AACAACAGCAAGATCGTGGCAGAGACAGCAACAGTG...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCTTTCTTGGGGGCTGGTaGGGCCCTCTTTTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCFLGGW*GPLFQQ
Trigger: TTGCTGAAAAAGAGGGCCCCACCAGCCCCCAAGAAA...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTATTTGTCACTGGGGTaGAGTAGCCGGTGCCGGAAA +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSYLSLG*SSRCRK
Trigger: TTTCCGGCACCGGCTACTCCACCCCAGTGACAAATA...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACTGTGGTCAGCACTTGTaGACTGAAGGTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDCGQHL*TEGLYP
Trigger: AGGATAAAGACCTTCAGTCCACAAGTGCTGACCACA...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACTTTCTCTGTCACATCTaGAGCAATGGTAGGGGAATC +
Preference number: 4 (lower is better)
Translates to: LASRASAGVGSEASRVQDFLCHI*SNGRGI
Trigger: GATTCCCCTACCATTGCTCCAGATGTGACAGAGAAA...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGAGCCTTGACCACCAGTaGCTCTCTCAGTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGSLDHQ*LSQFLC
Trigger: ACAGAGAAACTGAGAGAGCCACTGGTGGTCAAGGCT...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGCTGCCTGGCTCCACATaGGCATCCGTGAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQELPGST*ASVKVV
Trigger: CACCACCTTCACGGATGCCCATGTGGAGCCAGGCAG...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGTATACTTCCTGCCTaGCTCCACATGGGCATCCGT +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPGILPA*LHMGIR
Trigger: ACGGATGCCCATGTGGAGCCAGGCAGGAAGTATACC...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCATTGAACCAGGTGACGTaGGGCCGGGGCGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPLNQVT*GRGEPC
Trigger: GCAGGGCTCGCCCCGGCCCCACGTCACCTGGTTCAA...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGCACTTGCTGCACCCCTaGAATCTCTTGAATCCAGGA +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGHLLHP*NLLNPG
Trigger: TCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTG...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCAGAGGCCCAATTCCTaGTGTCATTCATGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCQRPNS*CHSWVL
Trigger: GAGCACCCATGAATGACACCAGGAATTGGGCCTCTG...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCACTTGCTGGAATCACTaGGGTCACCTTTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: KALAAPLESLESRRWRLPTCWNH*GHLWSS
Trigger: AGAACTCCAAAGGTGACCTCAGTGATTCCAGCAAGT...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCGCTTGGTTTGGTTGTTaGAGCCATAGGGGATCATCT +
Preference number: 4 (lower is better)
Translates to: KALAAPLESLESRRWRLPAWFGC*SHRGSS
Trigger: AGATGATCCCCTATGGCTTCAACAACCAAACCAAGC...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGAGGGAGCCACAGCTGTaGCCCGGAACTCATACTGAC +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQEREPQL*PGTHTD
Trigger: GTCAGTATGAGTTCCGGGTCACAGCTGTGGCTCCCT...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTCCCTCTCTGTGGGATTaGTTTTCCCTGGGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPPSLWD*FSLGRV
Trigger: CACTCTTCCCAGGGAAAATCAATCCCACAGAGAGGG...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGGCTCAAAGTCCGGCGTaGTGCAGCCTTCAGGGATCT +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQEAQSPA*CSLQGS
Trigger: AGATCCCTGAAGGCTGCAGCACGCCGGACTTTGAGC...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGTTGATCTGCAGCACGTaGTCCTTGCTGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQELICST*SLLPGL
Trigger: CAGCCCTGGCAGCAAGGAGCACGTGCTGCAGATCAA...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp GCTCAGAGTGATGCTGGTGTTCGATCTGTCTGTGACTTGGAGATTCCTCACCAGTTCCTGAGGTCTTCCTaGGGTTCCCTGTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: AQSDAGVRSVCDLEIPHQFLRSS*GSLCLF
Trigger: GAAGAGGCACAGGGAACCGCAGGAAGACCTCAGGAA...CTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGCATCACTCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp AGGTCAGTGCTGTACACCGCGGGGTTTCCTTCCAGGCTGCGGTCATTCTTGAACCACGGTAGTCGACGATaGCATACTTCAAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: RSVLYTAGFPSRLRSFLNHGSRR*HTSSRS
Trigger: AGATCTGCTTGAAGTATGGCATCGTCGACTACCGTG...GTTCAAGAATGACCGCAGCCTGGAAGGAAACCCCGCGGTGTACAGCACTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTTCCTTCTTCATCTCCTaGAGCCTGCGCAACATGCCA +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPSFFIS*SLRNMP
Trigger: TGGCATGTTGCGCAGGCTGCAGGAGATGAAGAAGGA...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCCCACTTCTCCTGCTCTaGAGTTTGTGGTCAGCACTT +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSPLLLL*SLWSAL
Trigger: AAGTGCTGACCACAAACTGCAGAGCAGGAGAAGTGG...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000437879.6
CDS-3UTR GCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCCATAGATGTCCAACCTaGCGTCTTTGCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSHRCPT*RLCHFS
Trigger: GGAGAAGTGGCAAAGACGGCAGGTTGGACATCTATG...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp TCGGAAGGTATACTTCCTGCCTGGCTCCACATGGGCATCCGTGAAGGTGGTGCTTGCACGAGACCGTCTTaGTTAAAGATGACTCCATCC +
Preference number: 4 (lower is better)
Translates to: SEGILPAWLHMGIREGGACTRPS*LKMTPS
Trigger: GGATGGAGTCATCTTTAAGCAAGACGGTCTCGTGCA...AGCACCACCTTCACGGATGCCCATGTGGAGCCAGGCAGGAAGTATACCTTCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGAGGGTGGCCTCGCTCTaGTGGTCACCAGCTACAAAG +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQERVASL*WSPATK
Trigger: CTTTGTAGCTGGTGACCAGCAGAGCGAGGCCACCCT...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp ATCCTTAGTGACAGTCACACTTCTTTTGGGCAAGGGCAAGCCATCCTTCAGCCACTGCCGTCCAGGTGTTaGTCCCCTTCTTACGCCTCT +
Preference number: 4 (lower is better)
Translates to: ILSDSHTSFGQGQAILQPLPSRC*SPSYAS
Trigger: AGAGGCGTAAGAAGGGGAGCAACACCTGGACGGCAG...TGGCTGAAGGATGGCTTGCCCTTGCCCAAAAGAAGTGTGACTGTCACTAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCGCCTCCTTCATTAACTaGTGTCACCCGCACGAAGTA +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCASFIN*CHPHEV
Trigger: TACTTCGTGCGGGTGACAGCAGTTAATGAAGGAGGC...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCGCCTCCTTCATTAACTaGTGTCACCCGCACGAAGTA +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSASFIN*CHPHEV
Trigger: TACTTCGTGCGGGTGACAGCAGTTAATGAAGGAGGC...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTGGCCGGGGCGAGCCCTaGACGGCACAGCTCATGCAG +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISGRGEP*TAQLMQ
Trigger: CTGCATGAGCTGTGCCGTGCAGGGCTCGCCCCGGCC...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCGCATAGAAAGCACTTaGTGCACCCCTGGAATCTCT +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCRIEST*CTPGIS
Trigger: AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCG...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCGTTCCTGGAAGTCCTTaGCTCCAGGTATCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: KALAAPLESLESRRWRLPVPGSP*LQVSVL
Trigger: TAGAACAGATACCTGGAGGCAAGGACTTCCAGGAAC...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGTGGCCCATGGGGCCTTaGGCATCCTTGGAGAAACTG +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQEWPMGP*ASLEKL
Trigger: CAGTTTCTCCAAGGATGCCCAAGGCCCCATGGGCCA...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTTTTCTCTGTCACATCTaGAGCAATGGTAGGGGAATC +
Preference number: 4 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLFLCHI*SNGRGI
Trigger: GATTCCCCTACCATTGCTCCAGATGTGACAGAGAAA...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTATGGGGAGGTGGCTCTaGAAGGGGATCTTCACTATC +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPMGRWL*KGIFTI
Trigger: GATAGTGAAGATCCCCTTCCAGAGCCACCTCCCCAT...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGCTGATACGGAAGCTGTaGGCAACCTCCTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQELIRKL*ATSFPC
Trigger: GCAGGGGAAGGAGGTTGCCCACAGCTTCCGTATCAG...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTTGAGTGACTTAGCTTaGAGCCAGGAGGTGGAATGC +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSLSDLA*SQEVEC
Trigger: GCATTCCACCTCCTGGCTCCAAGCTAAGTCACTCAA...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTTGACCCGATTTCCCTaGAACCCTTTAAACCACCGC +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFLTRFP*NPLNHR
Trigger: GCGGTGGTTTAAAGGGTTCCAGGGAAATCGGGTCAA...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCATTATCCCTGCTTaGTCTGGAGACCTATCCTTC +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCPIIPA*SGDLSF
Trigger: GAAGGATAGGTCTCCAGACCAAGCAGGGATAATGGG...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAAGCCGCCTCTTGGCCTaGTGCACCCTCCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPSRLLA*CTLPTL
Trigger: AAGGGTGGGGAGGGTGCACCAGGCCAAGAGGCGGCT...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGCAGCCCAGCTCAGAGTaGTGCTGGTGTTCGATCTGT +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQEQPSSE*CWCSIC
Trigger: ACAGATCGAACACCAGCATCACTCTGAGCTGGGCTG...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTGTCATTCTGTTGAGTaGCTTAGCTTGGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFCHSVE*LSLEPG
Trigger: TCCTGGCTCCAAGCTAAGTCACTCAACAGAATGACA...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGCAGCACGTGCTCCTTaGTGCCAGGGCTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPAARAP*CQGWRR
Trigger: TCTCCTCCAGCCCTGGCAGCAAGGAGCACGTGCTGC...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp GCTGGTGTTCGATCTGTCTGTGACTTGGAGATTCCTCACCAGCCCAGGGGGTCTCTCCAAGTCAAACTTTaGATTCCCATCCTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: AGVRSVCDLEIPHQPRGSLQVKL*IPILGD
Trigger: GTCACCAAGGATGGGAATGCAAAGTTTGACTTGGAG...AGACCCCCTGGGCTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGTACATTCAAAGACTaGGTCACCCTGCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPGTFKD*VTLLLT
Trigger: TGTGAGGAGCAGGGTGACGCAGTCTTTGAATGTACC...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAAGCCGGTGCCGGAAATaGCAGGCTGCACTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPSRCRK*QAALGQ
Trigger: CTGCCCTAGTGCAGCCTGGCATTTCCGGCACCGGCT...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGCACGAGACCGTCTTaGTTAAAGATGACTCCATCC +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSCTRPS*LKMTPS
Trigger: GGATGGAGTCATCTTTAAGCAAGACGGTCTCGTGCA...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCACGGCTGGTCGTTCACTaGCGTCCAGGTGTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPRLVVH*RPGVAP
Trigger: GGGAGCAACACCTGGACGGCAGTGAACGACCAGCCG...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGGCACTGGGCTGGCTCTaGCCTCCTTCATTAACTGCT +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQEALGWL*PPSLTA
Trigger: AGCAGTTAATGAAGGAGGCCAGAGCCAGCCCAGTGC...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCATGCAGCGGGACATCCTaGGCCTCGTCAGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPCSGTS*ASSGEG
Trigger: ACCCTCTCCTGACGAGGCCCAGGATGTCCCGCTGCA...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTAGGAACCGGGGCTTCTaGCTCAGGTCGGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISRNRGF*LRSGSR
Trigger: CCGGGAGCCCGACCTGAGCCAGAAGCCCCGGTTCCT...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGCAGCCCTGGGAAGACTaGAAGCTTCTGGGGTCATAC +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQEQPWED*KLLGSY
Trigger: GTATGACCCCAGAAGCTTCCAGTCTTCCCAGGGCTG...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGACCCATCTTACCCTCTaGTCCCGTTTCCCCAGATCC +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQETHLTL*SRFPRS
Trigger: GGATCTGGGGAAACGGGACCAGAGGGTAAGATGGGT...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCATTCTTTGACATCTaGTTTTCCCTTGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCPFFDI*FSLGTS
Trigger: GCTGGTGCCAAGGGAAAACCAGATGTCAAAGAATGG...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTTGCTCTGAGAATCCTTaGGATCCAGCTCCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPCSENP*DPAPSQ
Trigger: TTGACTTGGAGCTGGATCTCAAGGATTCTCAGAGCA...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR TCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTCCTCATCCCCTGAACTaGTTTTTCCAGAACTGCCTA +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPPHPLN*FFQNCL
Trigger: TAGGCAGTTCTGGAAAAATCAGTTCAGGGGATGAGG...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGTCAGCAAGTCCTTGGTaGTGGAGTCCACGAGGAACT +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQESASPW*WSPRGT
Trigger: AGTTCCTCGTGGACTCCAGCACCAAGGACTTGCTGA...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCAGCATTCATCACTGTTaGTGTCTCTGCCACGATCTT +
Preference number: 4 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFSIHHC*CLCHDL
Trigger: AAGATCGTGGCAGAGACAGCAACAGTGATGAATGCT...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGTGAAATCTCTATCTaGTTTCCTCTTGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSCEISI*FPLGQD
Trigger: GTCCTGGCCAAGAGGAAAGCAGATAGAGATTTCACA...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCTATAATCTGCCTTaGTCCCTGAACTTATTCCCT +
Preference number: 4 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCPYNLP*SLNLFP
Trigger: AGGGAATAAGTTCAGGGAGCAAGGCAGATTATAGGG...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGTGTAATCTGTGTAACTaGCTGAACCCATTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGCNLCN*LNPFPQ
Trigger: CTGAGGAAATGGGTTCAGGCAGTTACACAGATTACA...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGCAGGAGCCCAAGCATTaGTCGTCCCTTGTCTATCAG +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQEQEPKH*SSLVYQ
Trigger: CTGATAGACAAGGGACGAGCAATGCTTGGGCTCCTG...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTCCCTGCTCCTCACAGTaGGTCTCCGCCAGTGGGACC +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISPCSSQ*VSASGT
Trigger: GGTCCCACTGGCGGAGACCCACTGTGAGGAGCAGGG...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp ATCCTTAGTGACAGTCACACTTCTTTTGGGCAAGGGCAAGCCATCCTTCAGCCAAGGTCACCTCAGGCATaGGCATGGCTTCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: ILSDSHTSFGQGQAILQPRSPQA*AWLQRR
Trigger: TCTCCTTTGAAGCCATGCCCATGCCTGAGGTGACCT...TGGCTGAAGGATGGCTTGCCCTTGCCCAAAAGAAGTGTGACTGTCACTAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTAAGACTGGAAGCTTCTaGGGTCATACTCTACCTCAC +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPKTGSF*GHTLPH
Trigger: GTGAGGTAGAGTATGACCCCAGAAGCTTCCAGTCTT...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGAGCCTGTCTCACCTCTaGGTCCTTTTACTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQESLSHL*VLLLWS
Trigger: GCTCCAGAGTAAAAGGACCCAGAGGTGAGACAGGCT...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTTCCTCCAGGCAGCCTaGATGGGGAGGTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISFLQAA*MGRWLW
Trigger: CCAGAGCCACCTCCCCATTCAGGCTGCCTGGAGGAA...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGGCCGTGTAGGTGGTaGCTGGCACGGTGCCCACAT +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISWPCRW*LARCPH
Trigger: ATGTGGGCACCGTGCCAGTCACCACCTACACGGCCA...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCATTCCCCGTTTCCAGCTaGTGCTTGCTGAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPFPVSS*CLLRLW
Trigger: CCAGAGCCTCAGCAAGCAGCAGCTGGAAACGGGGAA...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCATCACCTTTGGAGTTCTaGCAACGCACCTCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPSPLEF*QRTSGL
Trigger: CAGGCCCGAGGTGCGTTGGCAGAACTCCAAAGGTGA...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp AGTGATGCTGGTGTTCGATCTGTCTGTGACTTGGAGATTCCTCACCAGCCCAGGAGCAGCTGCCATATCTaGTCAAGGTCCATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SDAGVRSVCDLEIPHQPRSSCHI*SRSIFF
Trigger: GAAAAAGATGGACCTTGAGCAGATATGGCAGCTGCT...CCTGGGCTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGCATCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR GCA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTCTCCAAGTCAAACTTTaGATTCCCATCCTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPLQVKL*IPILGD
Trigger: GTCACCAAGGATGGGAATGCAAAGTTTGACTTGGAG...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR GCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCACCAGCTTGGGTCCCCTaGACATGCGTGATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPPAWVP*TCVMKR
Trigger: CCTCTTCATCACGCATGTGCAGGGGACCCAAGCTGG...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTCGGCTGGTCGTTCACTaGCGTCCAGGTGTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISRLVVH*RPGVAP
Trigger: GGGAGCAACACCTGGACGGCAGTGAACGACCAGCCG...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCATTCTCTCCCATAGGCTaGCACCCCATGCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPFSPIG*HPMLPA
Trigger: GGCTGGAAGCATGGGGTGGCAGCCTATGGGAGAGAA...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAAAAGACAGCATCCGATaGAGGTCCAGGCTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPKDSIR*RSRLSG
Trigger: CCCGGAGAGCCTGGACCTCCATCGGATGCTGTCTTT...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGCAGCGGGACATCCTaGGCCTCGTCAGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISCSGTS*ASSGEG
Trigger: ACCCTCTCCTGACGAGGCCCAGGATGTCCCGCTGCA...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTGCCACCACCCTGAAGTaGTATTCGTGGCCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISATTLK*YSWPGR
Trigger: CCTCCCCGGCCACGAATACCACTTCAGGGTGGTGGC...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTGGGATGCACCAGGGCTaGCTGGTGTCCGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISGMHQG*LVSEGL
Trigger: CAAACCCTCGGACACCAGCCAGCCCTGGTGCATCCC...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGCCCTCAGAGACCCTaGTCCCATGGCTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISCPQRP*SHGSWT
Trigger: GGTCCAGGAGCCATGGGACCAGGGTCTCTGAGGGCA...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGACTTGCTGGAATCACTaGGGTCACCTTTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQETCWNH*GHLWSS
Trigger: AGAACTCCAAAGGTGACCTCAGTGATTCCAGCAAGT...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGTAGAGACCACTGTCTaGGAGTCCAGCCACAGGGAT +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPVETTV*ESSHRD
Trigger: ATCCCTGTGGCTGGACTCTCAGACAGTGGTCTCTAC...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTGAGGTGACGGGCTTCTaGTCAAAGTCCGGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISEVTGF*SKSGVL
Trigger: CAGCACGCCGGACTTTGAGCAGAAGCCCGTCACCTC...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTGCACGTGCTCCTTGCTaGCAGGGCTGGAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISARAPC*QGWRRS
Trigger: AGATCTCCTCCAGCCCTGGCAGCAAGGAGCACGTGC...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAAGCCTCCCAGCCTCCTaGTTTCCTCCAGCATTCATC +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPSLPAS*FPPAFI
Trigger: GATGAATGCTGGAGGAAAGCAGGAGGCTGGGAGGCT...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGCCCTATAATCTGCCTTaGTCCCCGAACCCATATTCT +
Preference number: 4 (lower is better)
Translates to: SGSPEAKKKETHMVRVQEPYNLP*SPNPYS
Trigger: AGAATATGGGTTCGGGGAGCAAGGCAGATTATAGGG...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTGTGTGCCATGCCACCTaGAGTGCCTGGCATTCCAGC +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISVCHAT*SAWHSS
Trigger: GCTGGAATGCCAGGCACTGCAGGTGGCATGGCACAC...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp GCTCAGAGTGATGCTGGTGTTCGATCTGTCTGTGACTTGGAGATTCCTCACCAGTGTGGTCAGCACTTGTaGACTGAAGGTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: AQSDAGVRSVCDLEIPHQCGQHL*TEGLYP
Trigger: AGGATAAAGACCTTCAGTCCACAAGTGCTGACCACA...CTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGCATCACTCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTCTCCATCCTTGGGATTaGCTTCCCGGGCCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISLHPWD*LPGPVQ
Trigger: CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR TCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTGGGCCTCTGAGGCTCTaGAGCCCCCATAATTTCCAG +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISGPLRL*SPHNFQ
Trigger: CTGGAAATTATGGGGGCTTCAGAGCCTCAGAGGCCC...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTCTGACCCCAGTTCCCTaGGGCCCTGGAAGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISLTPVP*GPGSSD
Trigger: ATCAGAACTTCCAGGGCCTCAGGGAACTGGGGTCAG...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTGCTCAAAGTCCGGCGTaGTGCAGCCTTCAGGGATCT +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISAQSPA*CSLQGS
Trigger: AGATCCCTGAAGGCTGCAGCACGCCGGACTTTGAGC...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTCACCTTTGGAGTTCTaGCAACGCACCTCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISSPLEF*QRTSGL
Trigger: CAGGCCCGAGGTGCGTTGGCAGAACTCCAAAGGTGA...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTGACCTCCTGCCCCATTaGTGTCTCCAGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISDLLPH*CLQLLP
Trigger: TGGGAGAAGCTGGAGACAGCAATGGGGCAGGAGGTC...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTACCCACTTTGCTTCCTaGCCTCAGAGACCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISTHFAS*PQRPWS
Trigger: GGACCAGGGTCTCTGAGGGCAGGAAGCAAAGTGGGT...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGTCTCACCTTCCACTaGCCCCTTGCCATCAAGAAA +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPGLTFH*PLAIKK
Trigger: TTTCTTGATGGCAAGGGGGCAGTGGAAGGTGAGACC...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCACAGGACTTGAACCTTTaGTATCCAGGGACCATGGGC +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPQDLNL*YPGTMG
Trigger: GCCCATGGTCCCTGGATAGCAAAGGTTCAAGTCCTG...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTCTCCTCTCTGTCCCTTaGCTCGCTGAGAGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISLLSVP*LAESSG
Trigger: ACCTGAGCTCTCAGCGAGGCAAGGGACAGAGAGGAG...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCATGGCCTCCAGTTCTGTaGAGAAGACCACAGCATCCT +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPWPPVL*RRPQHP
Trigger: AGGATGCTGTGGTCTTCTCCACAGAACTGGAGGCCA...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCACTTCATATTTGTCACTaGGGTGGAGTAGCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPLHICH*GGVAGA
Trigger: GGCACCGGCTACTCCACCCCAGTGACAAATATGAAG...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGTCCGAGGGTTTGCTaGCCCCCAGCTCATTCTTGG +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISCPRVC*PPAHSW
Trigger: CCAAGAATGAGCTGGGGGCCAGCAAACCCTCGGACA...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCATGGGTCCTTTTACTCTaGAGCTCCCTGACCCATTCC +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPWVLLL*SSLTHS
Trigger: GGAATGGGTCAGGGAGCTCCAGAGTAAAAGGACCCA...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTAGCCTCCTCTATAACTaGCCTCACTCCCTGACCCCA +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISSLLYN*PHSLTP
Trigger: TGGGGTCAGGGAGTGAGGTCAGTTATAGAGGAGGCT...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGTGATGAAGAGGCTGTaGACGAGACCGTCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPVMKRL*TRPSCL
Trigger: TAAGCAAGACGGTCTCGTGCACAGCCTCTTCATCAC...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCACGCATAGAAAGCACTTaGTGCACCCCTGGAATCTCT +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPRIEST*CTPGIS
Trigger: AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCG...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGGATTGATTTTCCCTaGGAAGAGTGGCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPGIDFP*EEWLCF
Trigger: GAAGCAGAGCCACTCTTCCCAGGGAAAATCAATCCC...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTGTCAGCTTGTTGATCTaGAGCACGTGCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISVSLLI*STCSLL
Trigger: CAGCAAGGAGCACGTGCTGCAGATCAACAAGCTGAC...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCACACGGTAGTCGACGATaGCATACTTCAAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPHGSRR*HTSSRS
Trigger: AGATCTGCTTGAAGTATGGCATCGTCGACTACCGTG...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTAGCCGGCGCAGACAGTaGTTGGTTTGGTTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISSRRRQ*LVWLLK
Trigger: CTTCAACAACCAAACCAAGCACTGTCTGCGCCGGCT...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCATGCACGAGACCGTCTTaGTTAAAGATGACTCCATCC +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPCTRPS*LKMTPS
Trigger: GGATGGAGTCATCTTTAAGCAAGACGGTCTCGTGCA...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTCTTCATATTTGTCACTaGGGTGGAGTAGCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISLHICH*GGVAGA
Trigger: GGCACCGGCTACTCCACCCCAGTGACAAATATGAAG...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR GCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTGTGATGAAGAGGCTGTaGACGAGACCGTCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISVMKRL*TRPSCL
Trigger: TAAGCAAGACGGTCTCGTGCACAGCCTCTTCATCAC...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCATTTCTCTGTCACATCTaGAGCAATGGTAGGGGAATC +
Preference number: 4 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPFLCHI*SNGRGI
Trigger: GATTCCCCTACCATTGCTCCAGATGTGACAGAGAAA...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTGTCTCTAGAAGACCCTaGAGTCCCAGAACTGTCTTG +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISVSRRP*SPRTVL
Trigger: CAAGACAGTTCTGGGACTCCAGGGTCTTCTAGAGAC...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR TCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGTCATTCTGTTGAGTaGCTTAGCTTGGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISCHSVE*LSLEPG
Trigger: TCCTGGCTCCAAGCTAAGTCACTCAACAGAATGACA...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CCA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTGATATTGATGGTTCCTaGAAGTCCTTGCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: NVLMKKRIESTCCTPGISDIDGS*KSLPPG
Trigger: ACCTGGAGGCAAGGACTTCCAGGAACCATCAATATC...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp GGCTGGAGGCCGACAGGATGGCTGGCGCGGAAGGGGCCTTGGGGAGAGCCTCAGGGCCCCCATTGTCCCTaGGGGGCCGCCAGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: GWRPTGWLARKGPWGEPQGPHCP*GAASGG
Trigger: GCCTCCGCTGGCGGCCCCCAAGGGACAATGGGGGCC...CTGAGGCTCTCCCCAAGGCCCCTTCCGCGCCAGCCATCCTGTCGGCCTCCAGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS CCA 90 bp CCCACTCGGCCGTCACCGTCCCAGGCACGTTCTCCTGCAGGTGGATaGGCCCAGGGGCCTGCGGGCATGTTCAAAGGAGACGGGCACACG +
Preference number: 5 (lower is better)
Translates to: PTRPSPSQARSPAGG*AQGPAGMFKGDGHT
Trigger: CGTGTGCCCGTCTCCTTTGAACATGCCCGCAGGCCCCTGGGCCCATCCACCTGCAGGAGAACGTGCCTGGGACGGTGACGGCCGAGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473483.1
CDS-3UTR CAA 90 bp TCCAGGGCCTCGCCAGCCCCCTCTGAGGTCACAGCCCGCACTCGGAAGGTATACACAGTCCGGCCCCCATaGTCCCTTGGGGGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: SRASPAPSEVTARTRKVYTVRPP*SLGGRQ
Trigger: CTGGCGGCCCCCAAGGGACAATGGGGGCCGGACTGT...GTATACCTTCCGAGTGCGGGCTGTGACCTCAGAGGGGGCTGGCGAGGCCCTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS GCA 90 bp CAGGGACCATGGGCTTCGGCATCCACCAGCCGCCTCTTGGCCTGGTaGACCCTCCCCACCCTTAAAGCCCCCTGGCCCTTCATGGGTCCC +
Preference number: 5 (lower is better)
Translates to: QGPWASASTSRLLAW*TLPTLKAPWPFMGP
Trigger: GGGACCCATGAAGGGCCAGGGGGCTTTAAGGGTGGGGAGGGTGCACCAGGCCAAGAGGCGGCTGGTGGATGCCGAAGCCCATGGTCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp CTCGGCCGTCACCGTCCCAGGCACGTTCTCCTGCAGGTGGATGGGCCCAGGGGCAACCTCCATGGGGCCTaGTGGGGGATCAGGCTTGTC +
Preference number: 5 (lower is better)
Translates to: LGRHRPRHVLLQVDGPRGNLHGA*WGIRLV
Trigger: GACAAGCCTGATCCCCCACAAGGCCCCATGGAGGTT...GCCCCTGGGCCCATCCACCTGCAGGAGAACGTGCCTGGGACGGTGACGGCCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCGGCGCGGAAGGGGCCTaGGGGAGAGCCTCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: SRASAGVGSEASRVQDHPGAEGA*GRASGA
Trigger: GGCTCCTGAGGCTCTCCCCAAGGCCCCTTCCGCGCC...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS GCA 90 bp AGGTCACTGGTGAGGGTACAGGAGAGTGTGGCGGCCTCCCCCGGCTaGACTTCCATGTCAGCCAGGCCCTGGGAGAAGTGGCCCATGGGG +
Preference number: 5 (lower is better)
Translates to: RSLVRVQESVAASPG*TSMSARPWEKWPMG
Trigger: CCCCATGGGCCACTTCTCCCAGGGCCTGGCTGACATGGAAGTGCAGCCGGGGGAGGCCGCCACACTCTCCTGTACCCTCACCAGTGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000473483.1
CDS GCA 90 bp GGAGAGGGTTCCCACTCGGCCGTCACCGTCCCAGGCACGTTCTCCTaGAGGTGGATGGGCCCAGGGGCCTGCGGGCATGTTCAAAGGAGA +
Preference number: 5 (lower is better)
Translates to: GEGSHSAVTVPGTFS*RWMGPGACGHVQRR
Trigger: TCTCCTTTGAACATGCCCGCAGGCCCCTGGGCCCATCCACCTGCAGGAGAACGTGCCTGGGACGGTGACGGCCGAGTGGGAACCCTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473483.1
CDS CCA 90 bp CCCGCAGACCCTGTCACCCCAGGACTCCCTAGGCCACCATCTGAATaGTGCCCTCCCCTAGGGTCCATGCCTGCCTGGCATGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: PADPVTPGLPRPPSE*CPPLGSMPAWHAEA
Trigger: GGCCTCTGCATGCCAGGCAGGCATGGACCCTAGGGGAGGGCACCATTCAGATGGTGGCCTAGGGAGTCCTGGGGTGACAGGGTCTGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp TCCAGGGCCTCGCCAGCCCCCTCTGAGGTCACAGCCCGCACTCGGAAGGTATACGCACAGCCTCCATCCTaGGGATTGGCTTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SRASPAPSEVTARTRKVYAQPPS*GLASRA
Trigger: GGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGC...GTATACCTTCCGAGTGCGGGCTGTGACCTCAGAGGGGGCTGGCGAGGCCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS GCA 90 bp CTCACTCCTCAGTGTCACGCTGTACTGGCCACAGTCCTTCCTGCCTaGGCTGGGGAGGCACAGCCGCGTGTAGCCATCCCCCAGGTCCAC +
Preference number: 5 (lower is better)
Translates to: LTPQCHAVLATVLPA*AGEAQPRVAIPQVH
Trigger: GTGGACCTGGGGGATGGCTACACGCGGCTGTGCCTCCCCAGCGCAGGCAGGAAGGACTGTGGCCAGTACAGCGTGACACTGAGGAGTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000473483.1
CDS GCA 90 bp CTCCCTCACTCCTCAGTGTCACGCTGTACTGGCCACAGTCCTTCCTaGCTGCGCTGGGGAGGCACAGCCGCGTGTAGCCATCCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: LPHSSVSRCTGHSPS*LRWGGTAACSHPPG
Trigger: ACCTGGGGGATGGCTACACGCGGCTGTGCCTCCCCAGCGCAGGCAGGAAGGACTGTGGCCAGTACAGCGTGACACTGAGGAGTGAGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000473483.1
CDS CCA 90 bp ATCCAGGGACCATGGGCTTCGGCATCCACCAGCCGCCTCTTGGCCTaGTGCACCCTCCCCACCCTTAAAGCCCCCTGGCCCTTCATGGGT +
Preference number: 5 (lower is better)
Translates to: IQGPWASASTSRLLA*CTLPTLKAPWPFMG
Trigger: ACCCATGAAGGGCCAGGGGGCTTTAAGGGTGGGGAGGGTGCACCAGGCCAAGAGGCGGCTGGTGGATGCCGAAGCCCATGGTCCCTGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp CCCACTCGGCCGTCACCGTCCCAGGCACGTTCTCCTGCAGGTGGATGGGCCCAGTCCTCGCCTGTCAGCTaGTTGATCTGCAGCACGTGC +
Preference number: 5 (lower is better)
Translates to: PTRPSPSQARSPAGGWAQSSPVS*LICSTC
Trigger: GCACGTGCTGCAGATCAACAAGCTGACAGGCGAGGA...CTGGGCCCATCCACCTGCAGGAGAACGTGCCTGGGACGGTGACGGCCGAGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp CAGCCCTATGGCAATCCTGAACCTCCATGGGGCCTTGTGGGGGATCAGGCTTGTGGCGCGGAAGGGGCCTaGGGGAGAGCCTCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: QPYGNPEPPWGLVGDQACGAEGA*GRASGA
Trigger: GGCTCCTGAGGCTCTCCCCAAGGCCCCTTCCGCGCC...ACAAGCCTGATCCCCCACAAGGCCCCATGGAGGTTCAGGATTGCCATAGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp TCCAGGGCCTCGCCAGCCCCCTCTGAGGTCACAGCCCGCACTCGGAAGGTATACAGGAGGGTGAAGCGGTaGGTGTGGATGCGGTCGGCT +
Preference number: 5 (lower is better)
Translates to: SRASPAPSEVTARTRKVYRRVKR*VWMRSA
Trigger: AGCCGACCGCATCCACACCAACCGCTTCACCCTCCT...GTATACCTTCCGAGTGCGGGCTGTGACCTCAGAGGGGGCTGGCGAGGCCCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGCCCCCAGCTCATTCTaGGCCACCACCCTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQAPSSF*ATTLKW
Trigger: CCACTTCAGGGTGGTGGCCAAGAATGAGCTGGGGGC...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS TCA 90 bp CTACCTCACCCGAGGCCCAAGCTGTTTCCTGGCCATCCCTTCCCCTaGGCTCCTGTAGGACACCTTCGCAGCCTCTGGGGTCTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: LPHPRPKLFPGHPFP*APVGHLRSLWGLLG
Trigger: GCCCAGGAGACCCCAGAGGCTGCGAAGGTGTCCTACAGGAGCTCAGGGGAAGGGATGGCCAGGAAACAGCTTGGGCCTCGGGTGAGGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 90 bp GCAGACCCTGTCACCCCAGGACTCCCTAGGCCACCATCTGAATGGTaGCCTCCCCTAGGGTCCATGCCTGCCTGGCATGCAGAGGCCCAA +
Preference number: 5 (lower is better)
Translates to: ADPVTPGLPRPPSEW*PPLGSMPAWHAEAQ
Trigger: TTGGGCCTCTGCATGCCAGGCAGGCATGGACCCTAGGGGAGGGCACCATTCAGATGGTGGCCTAGGGAGTCCTGGGGTGACAGGGTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 90 bp GGGACCCCTGCTCCCCGAGGGACCTCTTTCCTCCTCTCTGTCCCTTaGCTCGCTGAGAGCTCAGGTCCTGGGTCCCTCCTGACCTATCTC +
Preference number: 5 (lower is better)
Translates to: GTPAPRGTSFLLSVP*LAESSGPGSLLTYL
Trigger: GAGATAGGTCAGGAGGGACCCAGGACCTGAGCTCTCAGCGAGGCAAGGGACAGAGAGGAGGAAAGAGGTCCCTCGGGGAGCAGGGGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000473483.1
CDS CCA 90 bp GTCCCCCATCAAGGAGTAGCCATGTCTGCCAAGGCCATCCCTGTCTaGGCTGGCTATGTGCTGGAGCCCAGAAGCCGGCCCAGCCCCTTC +
Preference number: 5 (lower is better)
Translates to: VPHQGVAMSAKAIPV*AGYVLEPRSRPSPF
Trigger: GAAGGGGCTGGGCCGGCTTCTGGGCTCCAGCACATAGCCAGCCCAGACAGGGATGGCCTTGGCAGACATGGCTACTCCTTGATGGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000444705.2
CDS CCA 90 bp TTGCTATCCAGGGACCATGGGCTTCGGCATCCACCAGCCGCCTCTTaGCCTGGTGCACCCTCCCCACCCTTAAAGCCCCCTGGCCCTTCA +
Preference number: 5 (lower is better)
Translates to: LLSRDHGLRHPPAAS*PGAPSPPLKPPGPS
Trigger: TGAAGGGCCAGGGGGCTTTAAGGGTGGGGAGGGTGCACCAGGCCAAGAGGCGGCTGGTGGATGCCGAAGCCCATGGTCCCTGGATAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp GGCGCTGCCGGGGCCCCGAGGTGCTGTCCATGTCAGTGTGATGCCCTGGCTGGACGGCGCAGACAGTGCTaGGTTTGGTTGTTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: GAAGAPRCCPCQCDALAGRRRQC*VWLLKP
Trigger: TGGCTTCAACAACCAAACCAAGCACTGTCTGCGCCG...TCCAGCCAGGGCATCACACTGACATGGACAGCACCTCGGGGCCCCGGCAGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTACCGGCTTCCCAGCCTaGACCACCAGTGGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: ALGTASILGIGFPGQCRCTGFPA*TTSGSL
Trigger: GAGAGAGCCACTGGTGGTCAAGGCTGGGAAGCCGGT...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCGGCCCCCATTGTCCCTaGGGGGCCGCCAGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFGPHCP*GAASGG
Trigger: GCCTCCGCTGGCGGCCCCCAAGGGACAATGGGGGCC...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTACAGTCCGGCCCCCATaGTCCCTTGGGGGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLTVRPP*SLGGRQ
Trigger: CTGGCGGCCCCCAAGGGACAATGGGGGCCGGACTGT...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGACTGCCGTCCAGGTGTaGCTCCCCTTCTTACGCCTC +
Preference number: 5 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQTAVQV*LPFLRL
Trigger: GAGGCGTAAGAAGGGGAGCAACACCTGGACGGCAGT...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCCTCCATCCTTGGGATaGGCTTCCCGGGCCAGTGCA +
Preference number: 5 (lower is better)
Translates to: ALGTASILGIGFPGQCRCPPSLG*ASRASA
Trigger: TGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGG...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS GCA 90 bp CCAGGCTGCACTAGGGCAGGGGCTGGAGAGGGTACATTCAAAGACTaGGTCACCCTGCTCCTCACAGTGGGTCTCCGCCAGTGGGACCAC +
Preference number: 5 (lower is better)
Translates to: PGCTRAGAGEGTFKD*VTLLLTVGLRQWDH
Trigger: GTGGTCCCACTGGCGGAGACCCACTGTGAGGAGCAGGGTGACGCAGTCTTTGAATGTACCCTCTCCAGCCCCTGCCCTAGTGCAGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000444705.2
CDS CCA 90 bp CCATCAAGGAGTAGCCATGTCTGCCAAGGCCATCCCTGTCTGGGCTaGCTATGTGCTGGAGCCCAGAAGCCGGCCCAGCCCCTTCAAGGG +
Preference number: 5 (lower is better)
Translates to: PSRSSHVCQGHPCLG*LCAGAQKPAQPLQG
Trigger: CCCTTGAAGGGGCTGGGCCGGCTTCTGGGCTCCAGCACATAGCCAGCCCAGACAGGGATGGCCTTGGCAGACATGGCTACTCCTTGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000444705.2
CDS-3UTR CAA 90 bp CTCGGCCGTCACCGTCCCAGGCACGTTCTCCTGCAGGTGGATGGGCCCAGGGGCGTGCACGAGACCGTCTaGCTTAAAGATGACTCCATC +
Preference number: 5 (lower is better)
Translates to: LGRHRPRHVLLQVDGPRGVHETV*LKDDSI
Trigger: GATGGAGTCATCTTTAAGCAAGACGGTCTCGTGCAC...GCCCCTGGGCCCATCCACCTGCAGGAGAACGTGCCTGGGACGGTGACGGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGACCGGCTTCCCAGCCTaGACCACCAGTGGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVTGFPA*TTSGSL
Trigger: GAGAGAGCCACTGGTGGTCAAGGCTGGGAAGCCGGT...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCGGCGCGGAAGGGGCCTaGGGGAGAGCCTCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCGAEGA*GRASGA
Trigger: GGCTCCTGAGGCTCTCCCCAAGGCCCCTTCCGCGCC...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCACTGCCGTCCAGGTGTaGCTCCCCTTCTTACGCCTC +
Preference number: 5 (lower is better)
Translates to: LWAQPPSLGLASRASAGVTAVQV*LPFLRL
Trigger: GAGGCGTAAGAAGGGGAGCAACACCTGGACGGCAGT...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCAGGCTGCGGTCATTCTaGAACCAGGTGACGTGGGGC +
Preference number: 5 (lower is better)
Translates to: LWAQPPSLGLASRASAGVRLRSF*NQVTWG
Trigger: GCCCCACGTCACCTGGTTCAAGAATGACCGCAGCCT...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp TCCAGGGCCTCGCCAGCCCCCTCTGAGGTCACAGCCCGCACTCGGAAGGTATACTTCTCAGCCACAGCCTaGTACTCCCCGCTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: SRASPAPSEVTARTRKVYFSATA*YSPLSF
Trigger: GAAGGACAGCGGGGAGTACAAGGCTGTGGCTGAGAA...GTATACCTTCCGAGTGCGGGCTGTGACCTCAGAGGGGGCTGGCGAGGCCCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS GCA 90 bp CTAGGGCAGGGGCTGGAGAGGGTACATTCAAAGACTGCGTCACCCTaGTCCTCACAGTGGGTCTCCGCCAGTGGGACCACCACTCTTGGG +
Preference number: 5 (lower is better)
Translates to: LGQGLERVHSKTASP*SSQWVSASGTTTLG
Trigger: CCCAAGAGTGGTGGTCCCACTGGCGGAGACCCACTGTGAGGAGCAGGGTGACGCAGTCTTTGAATGTACCCTCTCCAGCCCCTGCCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000444705.2
CDS GCA 90 bp GGAGCAATGGTAGGGGAATCCTGGACGGTCAGGGTGGCCTCGCTCTaGTGGTCACCAGCTACAAAGGTGTACCTCCCAGCTTGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: GAMVGESWTVRVASL*WSPATKVYLPAWVP
Trigger: GGGGACCCAAGCTGGGAGGTACACCTTTGTAGCTGGTGACCAGCAGAGCGAGGCCACCCTGACCGTCCAGGATTCCCCTACCATTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000473483.1
CDS CCA 90 bp GCAATGGTAGGGGAATCCTGGACGGTCAGGGTGGCCTCGCTCTGCTaGTCACCAGCTACAAAGGTGTACCTCCCAGCTTGGGTCCCCTGC +
Preference number: 5 (lower is better)
Translates to: AMVGESWTVRVASLC*SPATKVYLPAWVPC
Trigger: GCAGGGGACCCAAGCTGGGAGGTACACCTTTGTAGCTGGTGACCAGCAGAGCGAGGCCACCCTGACCGTCCAGGATTCCCCTACCATTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000473483.1
CDS-3UTR CAA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTTGCAGCACGTGCTCCTaGCTGCCAGGGCTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLCSTCS*LPGLEE
Trigger: CTCCTCCAGCCCTGGCAGCAAGGAGCACGTGCTGCA...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCATGCAGCACGTGCTCCTaGCTGCCAGGGCTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PSLGLASRASAGVGSEASCSTCS*LPGLEE
Trigger: CTCCTCCAGCCCTGGCAGCAAGGAGCACGTGCTGCA...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGCTCCTGCTCTGCAGTTaGTGGTCAGCACTTGTGGAC +
Preference number: 5 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQLLLCS*WSALVD
Trigger: GTCCACAAGTGCTGACCACAAACTGCAGAGCAGGAG...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000437879.6
CDS-3UTR CAA 90 bp TCCAGGGCCTCGCCAGCCCCCTCTGAGGTCACAGCCCGCACTCGGAAGGTATACCTCCTGCTCTGCAGTTaGTGGTCAGCACTTGTGGAC +
Preference number: 5 (lower is better)
Translates to: SRASPAPSEVTARTRKVYLLLCS*WSALVD
Trigger: GTCCACAAGTGCTGACCACAAACTGCAGAGCAGGAG...GTATACCTTCCGAGTGCGGGCTGTGACCTCAGAGGGGGCTGGCGAGGCCCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp TCCAGGGCCTCGCCAGCCCCCTCTGAGGTCACAGCCCGCACTCGGAAGGTATACTCCTGGGTGGTGAGCTaGACGCCATCCTTAAACCAG +
Preference number: 5 (lower is better)
Translates to: SRASPAPSEVTARTRKVYSWVVS*TPSLNQ
Trigger: CTGGTTTAAGGATGGCGTCAAGCTCACCACCCAGGA...GTATACCTTCCGAGTGCGGGCTGTGACCTCAGAGGGGGCTGGCGAGGCCCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCACAGTCCGGCCCCCATaGTCCCTTGGGGGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFTVRPP*SLGGRQ
Trigger: CTGGCGGCCCCCAAGGGACAATGGGGGCCGGACTGT...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTACTGTCAGCAAGTCCTaGGTGCTGGAGTCCACGAGG +
Preference number: 5 (lower is better)
Translates to: ALGTASILGIGFPGQCRCTVSKS*VLESTR
Trigger: CCTCGTGGACTCCAGCACCAAGGACTTGCTGACAGT...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAGCACAGCCTCCATCCTaGGGATTGGCTTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: PSLGLASRASAGVGSEASAQPPS*GLASRA
Trigger: GGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGC...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCGGCCCTGATGTTGACTaGCCCCTTCCCCCAGGCATA +
Preference number: 5 (lower is better)
Translates to: SRASAGVGSEASRVQDHPGPDVD*PLPPGI
Trigger: TATGCCTGGGGGAAGGGGCAAGTCAACATCAGGGCC...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS TCA 90 bp CTCTGCTACTGGAAAGCCCTCGCCCTCCTGTCCAGGGCCCCAGGCTaGGTCAGCTGTCCCTTTGTCCCCCATCAAGGAGTAGCCATGTCT +
Preference number: 5 (lower is better)
Translates to: LCYWKALALLSRAPG*VSCPFVPHQGVAMS
Trigger: AGACATGGCTACTCCTTGATGGGGGACAAAGGGACAGCTGACTCAGCCTGGGGCCCTGGACAGGAGGGCGAGGGCTTTCCAGTAGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000444705.2
CDS GCA 90 bp TGTCCAGTTGTCTTCCACTGTCCCCTCTGTGCTCCTTTCCTTCCCTaGTGCTCCCCAGTCCTCCAGCCTGAAGCCGACTGGACCCAGCCT +
Preference number: 5 (lower is better)
Translates to: CPVVFHCPLCAPFLP*CSPVLQPEADWTQP
Trigger: AGGCTGGGTCCAGTCGGCTTCAGGCTGGAGGACTGGGGAGCAGCAGGGAAGGAAAGGAGCACAGAGGGGACAGTGGAAGACAACTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 90 bp GCCTCGCTCTGCTGGTCACCAGCTACAAAGGTGTACCTCCCAGCTTaGGTCCCCTGCACATGCGTGATGAAGAGGCTGTGCACGAGACCG +
Preference number: 5 (lower is better)
Translates to: ASLCWSPATKVYLPA*VPCTCVMKRLCTRP
Trigger: CGGTCTCGTGCACAGCCTCTTCATCACGCATGTGCAGGGGACCCAAGCTGGGAGGTACACCTTTGTAGCTGGTGACCAGCAGAGCGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000473483.1
CDS CCA 90 bp ACCCACTTTGCTTCCTGCCCTCAGAGACCCTGGTCCCATGGCTCCTaGACCCCCAGAGCCATCTTCATAGCCTCCTTCTCCAAAGGCCCC +
Preference number: 5 (lower is better)
Translates to: THFASCPQRPWSHGS*TPRAIFIASFSKGP
Trigger: GGGGCCTTTGGAGAAGGAGGCTATGAAGATGGCTCTGGGGGTCCAGGAGCCATGGGACCAGGGTCTCTGAGGGCAGGAAGCAAAGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 90 bp CCCCCTCACCCACTTTGCTTCCTGCCCTCAGAGACCCTGGTCCCATaGCTCCTGGACCCCCAGAGCCATCTTCATAGCCTCCTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: PPHPLCFLPSETLVP*LLDPQSHLHSLLLQ
Trigger: TTGGAGAAGGAGGCTATGAAGATGGCTCTGGGGGTCCAGGAGCCATGGGACCAGGGTCTCTGAGGGCAGGAAGCAAAGTGGGTGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 90 bp GATGGCAGGGAGGGCCCAGAACCCCAGGGACTCTCAGGCCTTAGTTaGGGGAAGACAGGGCTGGTACCTATGACTTGCAGAGTGAGCTCG +
Preference number: 5 (lower is better)
Translates to: DGREGPEPQGLSGLS*GKTGLVPMTCRVSS
Trigger: CGAGCTCACTCTGCAAGTCATAGGTACCAGCCCTGTCTTCCCCCAACTAAGGCCTGAGAGTCCCTGGGGTTCTGGGCCCTCCCTGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473483.1
CDS-3UTR CAA 90 bp AGGTCAGTGCTGTACACCGCGGGGTTTCCTTCCAGGCTGCGGTCATTCTTGAACTGCAGCACGTGCTCCTaGCTGCCAGGGCTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: RSVLYTAGFPSRLRSFLNCSTCS*LPGLEE
Trigger: CTCCTCCAGCCCTGGCAGCAAGGAGCACGTGCTGCA...GTTCAAGAATGACCGCAGCCTGGAAGGAAACCCCGCGGTGTACAGCACTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCATCGCCTGTCAGCTTGTaGATCTGCAGCACGTGCTCC +
Preference number: 5 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPSPVSL*ICSTCS
Trigger: GGAGCACGTGCTGCAGATCAACAAGCTGACAGGCGA...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCATCCTCGCCTGTCAGCTaGTTGATCTGCAGCACGTGC +
Preference number: 5 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPSSPVS*LICSTC
Trigger: GCACGTGCTGCAGATCAACAAGCTGACAGGCGAGGA...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp TGGGGCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGTGTGGGGGATCAGGCTaGTCTATGACTTGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: WGSGHSLHPWDWLPGPVQCGGSG*SMTCRV
Trigger: CACTCTGCAAGTCATAGACAAGCCTGATCCCCCACA...CTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGGGCCCCCATTGTCCCTaGGGGGCCGCCAGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: SGSPEAKKKETHMVRVQEGPHCP*GAASGG
Trigger: GCCTCCGCTGGCGGCCCCCAAGGGACAATGGGGGCC...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTAGGAGGGTGAAGCGGTaGGTGTGGATGCGGTCGGCT +
Preference number: 5 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLRRVKR*VWMRSA
Trigger: AGCCGACCGCATCCACACCAACCGCTTCACCCTCCT...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGAGGGTGAAGCGGTaGGTGTGGATGCGGTCGGCT +
Preference number: 5 (lower is better)
Translates to: PSLGLASRASAGVGSEASRRVKR*VWMRSA
Trigger: AGCCGACCGCATCCACACCAACCGCTTCACCCTCCT...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCTTCTCAGCCACAGCCTaGTACTCCCCGCTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: SRASAGVGSEASRVQDHPFSATA*YSPLSF
Trigger: GAAGGACAGCGGGGAGTACAAGGCTGTGGCTGAGAA...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCACCACCCATACCCTCTaGTCCTCCACTGGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPTTHTL*SSTGPQ
Trigger: CTGGGGCCCAGTGGAGGACAAGAGGGTATGGGTGGT...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACATCGGCTTCCCAGCCTaGACCACCAGTGGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: LASRASAGVGSEASRVQDIGFPA*TTSGSL
Trigger: GAGAGAGCCACTGGTGGTCAAGGCTGGGAAGCCGAT...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS GCA 90 bp TCAAAGTCCGGCGTGCTGCAGCCTTCAGGGATCTCCTCCACCAGCTaGCAGATGCTCACTCCAGGGATGTGGGACTTCCGGAGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: SKSGVLQPSGISSTS*QMLTPGMWDFRSFP
Trigger: AGGAAAGCTCCGGAAGTCCCACATCCCTGGAGTGAGCATCTGGCAGCTGGTGGAGGAGATCCCTGAAGGCTGCAGCACGCCGGACTTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS GCA 90 bp AAGACAGCATTTTTCCCCTCTGGCAGAGCCGAGGTGACGGGCTTCTaGTCAAAGTCCGGCGTGCTGCAGCCTTCAGGGATCTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: KTAFFPSGRAEVTGF*SKSGVLQPSGISST
Trigger: GGTGGAGGAGATCCCTGAAGGCTGCAGCACGCCGGACTTTGAGCAGAAGCCCGTCACCTCGGCTCTGCCAGAGGGGAAAAATGCTGTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS GCA 90 bp CTGAGTCAGCTGTCCCTTTGTCCCCCATCAAGGAGTAGCCATGTCTaGCAAGGCCATCCCTGTCTGGGCTGGCTATGTGCTGGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: LSQLSLCPPSRSSHV*QGHPCLGWLCAGAQ
Trigger: CTGGGCTCCAGCACATAGCCAGCCCAGACAGGGATGGCCTTGGCAGACATGGCTACTCCTTGATGGGGGACAAAGGGACAGCTGACTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000444705.2
CDS GCA 90 bp AGCCTCCCTCTCTGTGGGATTGATTTTCCCTGGGAAGAGTGGCTCTaGTTCCCTCTGCTACTGGAAAGCCCTCGCCCTCCTGTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: SLPLCGIDFPWEEWL*FPLLLESPRPPVQG
Trigger: GCCCTGGACAGGAGGGCGAGGGCTTTCCAGTAGCAGAGGGAAGCAGAGCCACTCTTCCCAGGGAAAATCAATCCCACAGAGAGGGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000444705.2
CDS GCA 90 bp CCTCTCCCAGGTCCCAGTCGAGCATCCCACAGTTGCTCTGGGGCATaGCTGTCCAGTTGTCTTCCACTGTCCCCTCTGTGCTCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: PLPGPSRASHSCSGA*LSSCLPLSPLCSFP
Trigger: AGGAAAGGAGCACAGAGGGGACAGTGGAAGACAACTGGACAGGCATGCCCCAGAGCAACTGTGGGATGCTCGACTGGGACCTGGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 90 bp AGGTCGCTCTTTCCTCTCCCAGGTCCCAGTCGAGCATCCCACAGTTaGTCTGGGGCATGCCTGTCCAGTTGTCTTCCACTGTCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: RSLFPLPGPSRASHS*SGACLSSCLPLSPL
Trigger: CAGAGGGGACAGTGGAAGACAACTGGACAGGCATGCCCCAGAGCAACTGTGGGATGCTCGACTGGGACCTGGGAGAGGAAAGAGCGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 90 bp TGCTTTCCTCTTGGCCAGGACCCTACAGGATCAGACTGGCATCCCTaGAGGTCGCTCTTTCCTCTCCCAGGTCCCAGTCGAGCATCCCAC +
Preference number: 5 (lower is better)
Translates to: CFPLGQDPTGSDWHP*RSLFPLPGPSRASH
Trigger: GTGGGATGCTCGACTGGGACCTGGGAGAGGAAAGAGCGACCTGCAGGGATGCCAGTCTGATCCTGTAGGGTCCTGGCCAAGAGGAAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 90 bp GGGAAGACAGGGCTGGTACCTATGACTTGCAGAGTGAGCTCGGCCTaGACAGAGCCTCCCTCACTCCTCAGTGTCACGCTGTACTGGCCA +
Preference number: 5 (lower is better)
Translates to: GKTGLVPMTCRVSSA*TEPPSLLSVTLYWP
Trigger: TGGCCAGTACAGCGTGACACTGAGGAGTGAGGGAGGCTCTGTGCAGGCCGAGCTCACTCTGCAAGTCATAGGTACCAGCCCTGTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473483.1
CDS CCA 90 bp GTCAGCCCGTCAGGGGACACATACACTTCATATTTGTCACTGGGGTaGAGTAGCCGGTGCCGGAAATGCCAGGCTGCACTAGGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: VSPSGDTYTSYLSLG*SSRCRKCQAALGQG
Trigger: CCCCTGCCCTAGTGCAGCCTGGCATTTCCGGCACCGGCTACTCCACCCCAGTGACAAATATGAAGTGTATGTGTCCCCTGACGGGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000444705.2
CDS CCA 90 bp TGGCCCAGCCTCCCTCTCTGTGGGATTGATTTTCCCTGGGAAGAGTaGCTCTGCTTCCCTCTGCTACTGGAAAGCCCTCGCCCTCCTGTC +
Preference number: 5 (lower is better)
Translates to: WPSLPLCGIDFPWEE*LCFPLLLESPRPPV
Trigger: GACAGGAGGGCGAGGGCTTTCCAGTAGCAGAGGGAAGCAGAGCCACTCTTCCCAGGGAAAATCAATCCCACAGAGAGGGAGGCTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000444705.2
CDS CCA 90 bp GCTCTTTCCTCTCCCAGGTCCCAGTCGAGCATCCCACAGTTGCTCTaGGGCATGCCTGTCCAGTTGTCTTCCACTGTCCCCTCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: ALSSPRSQSSIPQLL*GMPVQLSSTVPSVL
Trigger: GAGCACAGAGGGGACAGTGGAAGACAACTGGACAGGCATGCCCCAGAGCAACTGTGGGATGCTCGACTGGGACCTGGGAGAGGAAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 90 bp AGGCCACCATCTGAATGGTGCCCTCCCCTAGGGTCCATGCCTGCCTaGCATGCAGAGGCCCAATTCCTGGTGTCATTCATGGGTGCTCCA +
Preference number: 5 (lower is better)
Translates to: RPPSEWCPPLGSMPA*HAEAQFLVSFMGAP
Trigger: TGGAGCACCCATGAATGACACCAGGAATTGGGCCTCTGCATGCCAGGCAGGCATGGACCCTAGGGGAGGGCACCATTCAGATGGTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCACGGCGCAGACAGTGCTaGGTTTGGTTGTTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPRRRQC*VWLLKP
Trigger: TGGCTTCAACAACCAAACCAAGCACTGTCTGCGCCG...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAGTGGCCCATGGGGCCTaGGGCATCCTTGGAGAAACT +
Preference number: 5 (lower is better)
Translates to: PSLGLASRASAGVGSEASVAHGA*GILGET
Trigger: AGTTTCTCCAAGGATGCCCAAGGCCCCATGGGCCAC...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp GTATACTTCCTGCCTGGCTCCACATGGGCATCCGTGAAGGTGGTGCTGTCAGCGGTGGCCCATGGGGCCTaGGGCATCCTTGGAGAAACT +
Preference number: 5 (lower is better)
Translates to: VYFLPGSTWASVKVVLSAVAHGA*GILGET
Trigger: AGTTTCTCCAAGGATGCCCAAGGCCCCATGGGCCAC...CGCTGACAGCACCACCTTCACGGATGCCCATGTGGAGCCAGGCAGGAAGTATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCAACCTCCATGGGGCCTaGTGGGGGATCAGGCTTGTC +
Preference number: 5 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPNLHGA*WGIRLV
Trigger: GACAAGCCTGATCCCCCACAAGGCCCCATGGAGGTT...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp GTATACTTCCTGCCTGGCTCCACATGGGCATCCGTGAAGGTGGTGCTGTCAGCGACTGCCGTCCAGGTGTaGCTCCCCTTCTTACGCCTC +
Preference number: 5 (lower is better)
Translates to: VYFLPGSTWASVKVVLSATAVQV*LPFLRL
Trigger: GAGGCGTAAGAAGGGGAGCAACACCTGGACGGCAGT...CGCTGACAGCACCACCTTCACGGATGCCCATGTGGAGCCAGGCAGGAAGTATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCCTCCATCCTTGGGATaGGCTTCCCGGGCCAGTGCA +
Preference number: 5 (lower is better)
Translates to: KALAAPLESLESRRWRLPPPSLG*ASRASA
Trigger: TGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGG...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCGCACAGCCTCCATCCTaGGGATTGGCTTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCAQPPS*GLASRA
Trigger: GGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGC...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCACGCATAGAAAGCACTaGCTGCACCCCTGGAATCTC +
Preference number: 5 (lower is better)
Translates to: LWAQPPSLGLASRASAGVTHRKH*LHPWNL
Trigger: GAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGT...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACGGCATGCCTGTCCAGTaGTCTTCCACTGTCCCCTCT +
Preference number: 5 (lower is better)
Translates to: LASRASAGVGSEASRVQDGMPVQ*SSTVPS
Trigger: AGAGGGGACAGTGGAAGACAACTGGACAGGCATGCC...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACTCCCCCTTTCCCTACTaGGAGCATCCCCTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: LASRASAGVGSEASRVQDSPFPY*EHPLCP
Trigger: TGGACAGAGGGGATGCTCCAAGTAGGGAAAGGGGGA...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCCCCATTATCCCTGCTaGGTCTGGAGACCTATCCTT +
Preference number: 5 (lower is better)
Translates to: ALGTASILGIGFPGQCRCPHYPC*VWRPIL
Trigger: AAGGATAGGTCTCCAGACCAAGCAGGGATAATGGGG...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS TCA 90 bp CCTTGCTGCCAGGGCTGGAGGAGATCTTGTACTTGCTGGAATCACTaGGGTCACCTTTGGAGTTCTGCCAACGCACCTCGGGCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: PCCQGWRRSCTCWNH*GHLWSSANAPRAWA
Trigger: AGCCCAGGCCCGAGGTGCGTTGGCAGAACTCCAAAGGTGACCTCAGTGATTCCAGCAAGTACAAGATCTCCTCCAGCCCTGGCAGCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS GCA 90 bp GAGATCTTGTACTTGCTGGAATCACTGAGGTCACCTTTGGAGTTCTaGCAACGCACCTCGGGCCTGGGCTCCCCACAGACCACAGCCCGA +
Preference number: 5 (lower is better)
Translates to: EILYLLESLRSPLEF*QRTSGLGSPQTTAR
Trigger: TCGGGCTGTGGTCTGTGGGGAGCCCAGGCCCGAGGTGCGTTGGCAGAACTCCAAAGGTGACCTCAGTGATTCCAGCAAGTACAAGATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS GCA 90 bp TGTGGGGGATCAGGCTTGTCTATGACTTGCAGAGTGAGCTCGGCCTaGACAGAGCCTCCCTCACTCCTCAGTGTCACGCTGTACTGGCCA +
Preference number: 5 (lower is better)
Translates to: CGGSGLSMTCRVSSA*TEPPSLLSVTLYWP
Trigger: TGGCCAGTACAGCGTGACACTGAGGAGTGAGGGAGGCTCTGTGCAGGCCGAGCTCACTCTGCAAGTCATAGACAAGCCTGATCCCCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS CCA 90 bp CAAGGCTTCTGGCCCAGCCTCCCTCTCTGTGGGATTGATTTTCCCTaGGAAGAGTGGCTCTGCTTCCCTCTGCTACTGGAAAGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: QGFWPSLPLCGIDFP*EEWLCFPLLLESPR
Trigger: GCGAGGGCTTTCCAGTAGCAGAGGGAAGCAGAGCCACTCTTCCCAGGGAAAATCAATCCCACAGAGAGGGAGGCTGGGCCAGAAGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000444705.2
CDS CCA 90 bp CCGAGGCCTCAGGGATCCCTGAAGTTCCATAGCCCCCAAGATCTTTaGTGGAGCCTCGCTCATCTGAAAGAGTCTGTCGCCCTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: PRPQGSLKFHSPQDL*WSLAHLKESVALPE
Trigger: CTCAGGGAGGGCGACAGACTCTTTCAGATGAGCGAGGCTCCACCAAAGATCTTGGGGGCTATGGAACTTCAGGGATCCCTGAGGCCTCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp CTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCAGTTCTGCCTCCTCTTaGACTCCTCTGAGGGTAGAA +
Preference number: 5 (lower is better)
Translates to: LWAQPPSLGLASRASAGVSSASS*TPLRVE
Trigger: TTCTACCCTCAGAGGAGTCAAAGAGGAGGCAGAACT...GACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp TTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACTCCTGGGTGGTGAGCTaGACGCCATCCTTAAACCAG +
Preference number: 5 (lower is better)
Translates to: LASRASAGVGSEASRVQDSWVVS*TPSLNQ
Trigger: CTGGTTTAAGGATGGCGTCAAGCTCACCACCCAGGA...GTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTGTGCACGAGACCGTCTaGCTTAAAGATGACTCCATC +
Preference number: 5 (lower is better)
Translates to: ALGTASILGIGFPGQCRCVHETV*LKDDSI
Trigger: GATGGAGTCATCTTTAAGCAAGACGGTCTCGTGCAC...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp TCTGTGACTTGGAGATTCCTCACCAGCCCAGGGGGTCTCATGGGGTCCCGAGCAGAGTCCACGAGGAACTaGGGACAGACAGTAACAGGC +
Preference number: 5 (lower is better)
Translates to: SVTWRFLTSPGGLMGSRAESTRN*GQTVTG
Trigger: GCCTGTTACTGTCTGTCCCAAGTTCCTCGTGGACTC...TGCTCGGGACCCCATGAGACCCCCTGGGCTGGTGAGGAATCTCCAAGTCACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCACAGTCACACTTCTTTaGGGCAAGGGCAAGCCATCC +
Preference number: 5 (lower is better)
Translates to: SRASAGVGSEASRVQDHPTVTLL*GKGKPS
Trigger: GGATGGCTTGCCCTTGCCCAAAAGAAGTGTGACTGT...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCTGGTGTCCGAGGGTTaGCTGGCCCCCAGCTCATTC +
Preference number: 5 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCLVSEG*LAPSSF
Trigger: GAATGAGCTGGGGGCCAGCAAACCCTCGGACACCAG...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTTCCCTCTCTGTGGGATaGATTTTCCCTGGGAAGAGT +
Preference number: 5 (lower is better)
Translates to: ALGTASILGIGFPGQCRCSLSVG*IFPGKS
Trigger: ACTCTTCCCAGGGAAAATCAATCCCACAGAGAGGGA...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCGGGGCCATGCCCACCTaGGAGCCAGAACCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSGAMPT*EPEPLP
Trigger: AGGAAGAGGTTCTGGCTCCAAGGTGGGCATGGCCCC...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAACATCTGGTTTTCCCTaGGCACCAGCAGCCTCCGAG +
Preference number: 5 (lower is better)
Translates to: PSLGLASRASAGVGSEASTSGFP*APAASE
Trigger: CTCGGAGGCTGCTGGTGCCAAGGGAAAACCAGATGT...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCCAGCAGGCCCTGATGTaGACTTGCCCCTTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSQQALM*TCPFPQ
Trigger: CTGGGGGAAGGGGCAAGTCAACATCAGGGCCTGCTG...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGTCCACCAGCCGCCTCTaGGCCTGGTGCACCCTCCCC +
Preference number: 5 (lower is better)
Translates to: SGSPEAKKKETHMVRVQESTSRL*AWCTLP
Trigger: GGGGAGGGTGCACCAGGCCAAGAGGCGGCTGGTGGA...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 90 bp AAGTTCTATTACCCTGGGTGTACAGCTGACCTCCCGCTTCCTGTCTaGTCCCTCTTCCCCGTTTCCAGCTGCTGCTTGCTGAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: KFYYPGCTADLPLPV*SLFPVSSCCLLRLW
Trigger: CCAGAGCCTCAGCAAGCAGCAGCTGGAAACGGGGAAGAGGGAGCAGACAGGAAGCGGGAGGTCAGCTGTACACCCAGGGTAATAGAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS GCA 90 bp CTAGAGCAGCCATTCCTGCCCAGGTCTCACCTTCCACTGCCCCCTTaGCATCAAGAAACCCAGAAGCCCCCATTATCCCTGCTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: LEQPFLPRSHLPLPP*HQETQKPPLSLLGL
Trigger: CAGACCAAGCAGGGATAATGGGGGCTTCTGGGTTTCTTGATGGCAAGGGGGCAGTGGAAGGTGAGACCTGGGCAGGAATGGCTGCTCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 90 bp GCATCTTTCTCCTGCAGAGAACCGGAAGCTCTGGAGCCTGCGGGCTaGTTCCCAGCATCTATGCTGCCTTGGCTAAACCCCTGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: ASFSCREPEALEPAG*FPASMLPWLNPWFS
Trigger: GGAAAACCAGGGGTTTAGCCAAGGCAGCATAGATGCTGGGAAGCAGCCCGCAGGCTCCAGAGCTTCCGGTTCTCTGCAGGAGAAAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 90 bp CCAATACCCTTCCTACAACCTGGCCCATCTGCTGATCCCATTCCTTaGAGGCCTCCTGAACCATCTCTAAAGCCTGCCTCACCCCCTGGC +
Preference number: 5 (lower is better)
Translates to: PIPFLQPGPSADPIP*RPPEPSLKPASPPG
Trigger: GCCAGGGGGTGAGGCAGGCTTTAGAGATGGTTCAGGAGGCCTCCAAGGAATGGGATCAGCAGATGGGCCAGGTTGTAGGAAGGGTATTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 90 bp AGGCCTCAGGGATCCCTGAAGTTCCATAGCCCCCAAGATCTTTGGTaGAGCCTCGCTCATCTGAAAGAGTCTGTCGCCCTCCCTGAGACC +
Preference number: 5 (lower is better)
Translates to: RPQGSLKFHSPQDLW*SLAHLKESVALPET
Trigger: GGTCTCAGGGAGGGCGACAGACTCTTTCAGATGAGCGAGGCTCCACCAAAGATCTTGGGGGCTATGGAACTTCAGGGATCCCTGAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp CCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCAAGTTCTGCCTCCTCTTaGACTCCTCTGAGGGTAGAA +
Preference number: 5 (lower is better)
Translates to: PGPVQVSEVKLQGSRTIPSSASS*TPLRVE
Trigger: TTCTACCCTCAGAGGAGTCAAAGAGGAGGCAGAACT...TGGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCATCACTGAGGTCACCTTaGGAGTTCTGCCAACGCACC +
Preference number: 5 (lower is better)
Translates to: PSLGLASRASAGVGSEASSLRSP*EFCQRT
Trigger: GGTGCGTTGGCAGAACTCCAAAGGTGACCTCAGTGA...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp CACAGCTGTGACCCGGAACTCATACTGACAGCCCTGCCGCACGTCCGCCACCGTTTTGCATTCCCATCCTaGGTGACCCTGATGTGTCTT +
Preference number: 5 (lower is better)
Translates to: HSCDPELILTALPHVRHRFAFPS*VTLMCL
Trigger: AAGACACATCAGGGTCACCAAGGATGGGAATGCAAA...ACGGTGGCGGACGTGCGGCAGGGCTGTCAGTATGAGTTCCGGGTCACAGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCCAGACAGTGCTTGGTTaGGTTGTTGAAGCCATAGGG +
Preference number: 5 (lower is better)
Translates to: SRASAGVGSEASRVQDHPQTVLG*VVEAIG
Trigger: CCCTATGGCTTCAACAACCAAACCAAGCACTGTCTG...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGCAGACAGTGCTTGGTTaGGTTGTTGAAGCCATAGGG +
Preference number: 5 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVQTVLG*VVEAIG
Trigger: CCCTATGGCTTCAACAACCAAACCAAGCACTGTCTG...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp TCTGTGACTTGGAGATTCCTCACCAGCCCAGGGGGTCTCATGGGGTCCCGAGCACTCAGGCCTCAGGTCTaGAATCTGGAACTCATAGCG +
Preference number: 5 (lower is better)
Translates to: SVTWRFLTSPGGLMGSRALRPQV*NLELIA
Trigger: CGCTATGAGTTCCAGATTCAAGACCTGAGGCCTGAG...TGCTCGGGACCCCATGAGACCCCCTGGGCTGGTGAGGAATCTCCAAGTCACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCTCCTGGGTGGTGAGCTaGACGCCATCCTTAAACCAG +
Preference number: 5 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPSWVVS*TPSLNQ
Trigger: CTGGTTTAAGGATGGCGTCAAGCTCACCACCCAGGA...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGGTGCACGAGACCGTCTaGCTTAAAGATGACTCCATC +
Preference number: 5 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVVHETV*LKDDSI
Trigger: GATGGAGTCATCTTTAAGCAAGACGGTCTCGTGCAC...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCAGGCTTGTCTATGACTaGCAGAGTGAGCTCGGCCTG +
Preference number: 5 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPRLVYD*QSELGL
Trigger: CAGGCCGAGCTCACTCTGCAAGTCATAGACAAGCCT...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTAGGCTTGTCTATGACTaGCAGAGTGAGCTCGGCCTG +
Preference number: 5 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLRLVYD*QSELGL
Trigger: CAGGCCGAGCTCACTCTGCAAGTCATAGACAAGCCT...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCAACCTCCATGGGGCCTaGTGGGGGATCAGGCTTGTC +
Preference number: 5 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFNLHGA*WGIRLV
Trigger: GACAAGCCTGATCCCCCACAAGGCCCCATGGAGGTT...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCGAGTCCACGAGGAACTaGGGACAGACAGTAACAGGC +
Preference number: 5 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPESTRN*GQTVTG
Trigger: GCCTGTTACTGTCTGTCCCAAGTTCCTCGTGGACTC...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp GCTGGTGTTCGATCTGTCTGTGACTTGGAGATTCCTCACCAGCCCAGGGGGTCTACTGTCAGCAAGTCCTaGGTGCTGGAGTCCACGAGG +
Preference number: 5 (lower is better)
Translates to: AGVRSVCDLEIPHQPRGSTVSKS*VLESTR
Trigger: CCTCGTGGACTCCAGCACCAAGGACTTGCTGACAGT...AGACCCCCTGGGCTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp AGTGATGCTGGTGTTCGATCTGTCTGTGACTTGGAGATTCCTCACCAGCCCAGGGCCCCCAGCTCATTCTaGGCCACCACCCTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: SDAGVRSVCDLEIPHQPRAPSSF*ATTLKW
Trigger: CCACTTCAGGGTGGTGGCCAAGAATGAGCTGGGGGC...CCTGGGCTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGCATCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp AGTGATGCTGGTGTTCGATCTGTCTGTGACTTGGAGATTCCTCACCAGCCCAGGCTGGTGTCCGAGGGTTaGCTGGCCCCCAGCTCATTC +
Preference number: 5 (lower is better)
Translates to: SDAGVRSVCDLEIPHQPRLVSEG*LAPSSF
Trigger: GAATGAGCTGGGGGCCAGCAAACCCTCGGACACCAG...CCTGGGCTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGCATCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTCCTCCATCCTTGGGATaGGCTTCCCGGGCCAGTGCA +
Preference number: 5 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPPPSLG*ASRASA
Trigger: TGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGG...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp GCTCTGGGCACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTTTCGCTGTCATTCTGTaGAGTGACTTAGCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: ALGTASILGIGFPGQCRCFAVIL*SDLAWS
Trigger: GCTCCAAGCTAAGTCACTCAACAGAATGACAGCGAA...ACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTGCCCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCCAGCATTCATCACTGTaGCTGTCTCTGCCACGATCT +
Preference number: 5 (lower is better)
Translates to: SRASAGVGSEASRVQDHPQHSSL*LSLPRS
Trigger: AGATCGTGGCAGAGACAGCAACAGTGATGAATGCTG...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCGAGCATCCCACAGTaGCTCTGGGGCATGCCTGTC +
Preference number: 5 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFSSIPQ*LWGMPV
Trigger: GACAGGCATGCCCCAGAGCAACTGTGGGATGCTCGA...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGCGCTCTGGACCATCCTaGGAGTTCGTGTCACCCTCT +
Preference number: 5 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGRSGPS*EFVSPS
Trigger: AGAGGGTGACACGAACTCCAAGGATGGTCCAGAGCG...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS TCA 90 bp GGATTTCTCTCCCTGGCTCTCGATGCTCCCAGACTCTTCTGCTCCTaGTGCCTGGGCTCCTTGCCTCTGCAGTTTGTGGTCAGCACTTGT +
Preference number: 5 (lower is better)
Translates to: GFLSLALDAPRLFCS*CLGSLPLQFVVSTC
Trigger: ACAAGTGCTGACCACAAACTGCAGAGGCAAGGAGCCCAGGCATCAGGAGCAGAAGAGTCTGGGAGCATCGAGAGCCAGGGAGAGAAATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000444705.2
CDS GCA 90 bp GTCCCCTGCACATGCGTGATGAAGAGGCTGTGCACGAGACCGTCTTaGTTAAAGATGACTCCATCCTGGGTGGTGAGCTTGACGCCATCC +
Preference number: 5 (lower is better)
Translates to: VPCTCVMKRLCTRPS*LKMTPSWVVSLTPS
Trigger: GGATGGCGTCAAGCTCACCACCCAGGATGGAGTCATCTTTAAGCAAGACGGTCTCGTGCACAGCCTCTTCATCACGCATGTGCAGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000473483.1
CDS GCA 90 bp TACCTCCCAGCTTGGGTCCCCTGCACATGCGTGATGAAGAGGCTGTaGACGAGACCGTCTTGCTTAAAGATGACTCCATCCTGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: YLPAWVPCTCVMKRL*TRPSCLKMTPSWVV
Trigger: CACCACCCAGGATGGAGTCATCTTTAAGCAAGACGGTCTCGTGCACAGCCTCTTCATCACGCATGTGCAGGGGACCCAAGCTGGGAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000473483.1
CDS GCA 90 bp TGCTGGTCACCAGCTACAAAGGTGTACCTCCCAGCTTGGGTCCCCTaGACATGCGTGATGAAGAGGCTGTGCACGAGACCGTCTTGCTTA +
Preference number: 5 (lower is better)
Translates to: CWSPATKVYLPAWVP*TCVMKRLCTRPSCL
Trigger: TAAGCAAGACGGTCTCGTGCACAGCCTCTTCATCACGCATGTGCAGGGGACCCAAGCTGGGAGGTACACCTTTGTAGCTGGTGACCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000473483.1
CDS GCA 90 bp AGTCCTCTGCATCAACAGAACTGCCCCTTCCAGGACTTGAACCTTTaGTATCCAGGGACCATGGGCTTCGGCATCCACCAGCCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: SPLHQQNCPFQDLNL*YPGTMGFGIHQPPL
Trigger: AAGAGGCGGCTGGTGGATGCCGAAGCCCATGGTCCCTGGATAGCAAAGGTTCAAGTCCTGGAAGGGGCAGTTCTGTTGATGCAGAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 90 bp ATTCTGAGCTCTCTCCCTGTAGATGGGGCCTCTCTGCAAGGCTTCTaGCCCAGCCTCCCTCTCTGTGGGATTGATTTTCCCTGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: ILSSLPVDGASLQGF*PSLPLCGIDFPWEE
Trigger: CTCTTCCCAGGGAAAATCAATCCCACAGAGAGGGAGGCTGGGCCAGAAGCCTTGCAGAGAGGCCCCATCTACAGGGAGAGAGCTCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 90 bp ATCTCTATCTGCTTTCCTCTTGGCCAGGACCCTACAGGATCAGACTaGCATCCCTGCAGGTCGCTCTTTCCTCTCCCAGGTCCCAGTCGA +
Preference number: 5 (lower is better)
Translates to: ISICFPLGQDPTGSD*HPCRSLFPLPGPSR
Trigger: TCGACTGGGACCTGGGAGAGGAAAGAGCGACCTGCAGGGATGCCAGTCTGATCCTGTAGGGTCCTGGCCAAGAGGAAAGCAGATAGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 90 bp AGAAGACCCTGGAGTCCCAGAACTGTCTTGCCATTCTTTGACATCTaGTTTTCCCTTGGCACCAGCAGCCTCCGAGGCCTCAGGGATCCC +
Preference number: 5 (lower is better)
Translates to: RRPWSPRTVLPFFDI*FSLGTSSLRGLRDP
Trigger: GGGATCCCTGAGGCCTCGGAGGCTGCTGGTGCCAAGGGAAAACCAGATGTCAAAGAATGGCAAGACAGTTCTGGGACTCCAGGGTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTCGCCTGTCAGCTTGTaGATCTGCAGCACGTGCTCC +
Preference number: 5 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSSPVSL*ICSTCS
Trigger: GGAGCACGTGCTGCAGATCAACAAGCTGACAGGCGA...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCAAGCTGGAGATGGTGTaGATGTACTGTGCCATCTTG +
Preference number: 5 (lower is better)
Translates to: SRASAGVGSEASRVQDHPKLEMV*MYCAIL
Trigger: CAAGATGGCACAGTACATCAACACCATCTCCAGCTT...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp CACAGCCTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGTTTGCATTCCCATCCTaGGTGACCCTGATGTGTCTT +
Preference number: 5 (lower is better)
Translates to: HSLHPWDWLPGPVQVSEVFAFPS*VTLMCL
Trigger: AAGACACATCAGGGTCACCAAGGATGGGAATGCAAA...CACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGCTGCCAGTGCCAGGCTaGTATCTGGATGTGGAACTC +
Preference number: 5 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGLPVPG*YLDVEL
Trigger: GAGTTCCACATCCAGATACAAGCCTGGCACTGGCAG...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCTGCCAGTGCCAGGCTaGTATCTGGATGTGGAACTC +
Preference number: 5 (lower is better)
Translates to: KALAAPLESLESRRWRLPLPVPG*YLDVEL
Trigger: GAGTTCCACATCCAGATACAAGCCTGGCACTGGCAG...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp AAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCGAGTCCACGAGGAACTaGGGACAGACAGTAACAGGC +
Preference number: 5 (lower is better)
Translates to: KALAAPLESLESRRWRLPESTRN*GQTVTG
Trigger: GCCTGTTACTGTCTGTCCCAAGTTCCTCGTGGACTC...GGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp TTTCTTCCCCAAGGACTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCACTGTCAGCAAGTCCTaGGTGCTGGAGTCCACGAGG +
Preference number: 5 (lower is better)
Translates to: FLPQGLHVLLAKTSPGIFTVSKS*VLESTR
Trigger: CCTCGTGGACTCCAGCACCAAGGACTTGCTGACAGT...GAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAGTCCTTGGGGAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAACAGTCACACTTCTTTaGGGCAAGGGCAAGCCATCC +
Preference number: 5 (lower is better)
Translates to: PSLGLASRASAGVGSEASTVTLL*GKGKPS
Trigger: GGATGGCTTGCCCTTGCCCAAAAGAAGTGTGACTGT...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTAGGCTGCGGTCATTCTaGAACCAGGTGACGTGGGGC +
Preference number: 5 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPRLRSF*NQVTWG
Trigger: GCCCCACGTCACCTGGTTCAAGAATGACCGCAGCCT...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp GCTGGTGTCCGAGGGTTTGCTGGCCCCCAGCTCATTCTTGGCCACCACCCTGAATTCGCTGTCATTCTGTaGAGTGACTTAGCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: AGVRGFAGPQLILGHHPEFAVIL*SDLAWS
Trigger: GCTCCAAGCTAAGTCACTCAACAGAATGACAGCGAA...TTCAGGGTGGTGGCCAAGAATGAGCTGGGGGCCAGCAAACCCTCGGACACCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp ACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTGGGCCTTCCACTGCCCCCTaGCCATCAAGAAACCCAGAA +
Preference number: 5 (lower is better)
Translates to: TSSWPKPRQASSHSHFPGPSTAP*PSRNPE
Trigger: TTCTGGGTTTCTTGATGGCAAGGGGGCAGTGGAAGG...CCCAGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp CTCCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTTCAGTAGAATTCCCCTaGCCCAGGATACCTGAGTCC +
Preference number: 5 (lower is better)
Translates to: LHPWDWLPGPVQVSEVKLSVEFP*PRIPES
Trigger: GGACTCAGGTATCCTGGGCAAGGGGAATTCTACTGA...AAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS TCA 90 bp GGTGGCTCTGGAAGGGGATCTTCACTATCACCGGCTTCCCAGCCTTaGCCACCAGTGGCTCTCTCAGTTTCTCTGTCACATCTGGAGCAA +
Preference number: 5 (lower is better)
Translates to: GGSGRGSSLSPASQP*PPVALSVSLSHLEQ
Trigger: TTGCTCCAGATGTGACAGAGAAACTGAGAGAGCCACTGGTGGTCAAGGCTGGGAAGCCGGTGATAGTGAAGATCCCCTTCCAGAGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000473483.1
CDS TCA 90 bp GGCCCAATTCCTGGTGTCATTCATGGGTGCTCCATCAGGACCACCTaGGCCATTTTTAAGACTGGCAACTCTCCCAGACCCTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GPIPGVIHGCSIRTT*AIFKTGNSPRPSSC
Trigger: GCAGGAGGAGGGTCTGGGAGAGTTGCCAGTCTTAAAAATGGCTCAGGTGGTCCTGATGGAGCACCCATGAATGACACCAGGAATTGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS TCA 90 bp TCCATAGGCTGTTCTGACCCCAGTTCCCTGAGGCCCTGGAAGTTCTaGTCCATCCTCATAACCCAGCACATTGCCAGCCCCATAAGCCCA +
Preference number: 5 (lower is better)
Translates to: SIGCSDPSSLRPWKF*SILITQHIASPISP
Trigger: TGGGCTTATGGGGCTGGCAATGTGCTGGGTTATGAGGATGGATCAGAACTTCCAGGGCCTCAGGGAACTGGGGTCAGAACAGCCTATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 90 bp TACACTTCATATTTGTCACTGGGGTGGAGTAGCCGGTGCCGGAAATaGCAGGCTGCACTAGGGCAGGGGCTGGAGAGGGTACATTCAAAG +
Preference number: 5 (lower is better)
Translates to: YTSYLSLGWSSRCRK*QAALGQGLERVHSK
Trigger: CTTTGAATGTACCCTCTCCAGCCCCTGCCCTAGTGCAGCCTGGCATTTCCGGCACCGGCTACTCCACCCCAGTGACAAATATGAAGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000444705.2
CDS GCA 90 bp TCCAGTCTGACCCCAAGGCCTTATTCTTCCAGAGCTCTCTGGTTCTaGTTCCACACATCCCATCCCAACAGTCTCCACTACTCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: SSLTPRPYSSRALWF*FHTSHPNSLHYSRG
Trigger: GCCCCTGGAGTAGTGGAGACTGTTGGGATGGGATGTGTGGAAGCAGAACCAGAGAGCTCTGGAAGAATAAGGCCTTGGGGTCAGACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 90 bp GGAGCCCCTCTGTCTCTAGAAGACCCTGGAGTCCCAGAACTGTCTTaGCATTCTTTGACATCTGGTTTTCCCTTGGCACCAGCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: GAPLSLEDPGVPELS*HSLTSGFPLAPAAS
Trigger: GGAGGCTGCTGGTGCCAAGGGAAAACCAGATGTCAAAGAATGGCAAGACAGTTCTGGGACTCCAGGGTCTTCTAGAGACAGAGGGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 90 bp TCCTCTCTCCATAGATGTCCAACCTGCCGTCTTTGCCACTTCTCCTaGTACCAAGGTGACCAGGGGGCTCCCGGCTCTGATCTTCATTCA +
Preference number: 5 (lower is better)
Translates to: SSLHRCPTCRLCHFS*YQGDQGAPGSDLHS
Trigger: TGAATGAAGATCAGAGCCGGGAGCCCCCTGGTCACCTTGGTAGCAGGAGAAGTGGCAAAGACGGCAGGTTGGACATCTATGGAGAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000473483.1
CDS CCA 90 bp CTGATGCCTGGGCTCCTTGCCTCTGCAGTTTGTGGTCAGCACTTGTaGACTGAAGGTCTTTATCCTTCCCAGCTTCAACCACCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LMPGLLASAVCGQHL*TEGLYPSQLQPPAR
Trigger: CCTGGCTGGTGGTTGAAGCTGGGAAGGATAAAGACCTTCAGTCCACAAGTGCTGACCACAAACTGCAGAGGCAAGGAGCCCAGGCATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000444705.2
CDS-3UTR CAA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCCGGCGCAGACAGTGCTaGGTTTGGTTGTTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSRRRQC*VWLLKP
Trigger: TGGCTTCAACAACCAAACCAAGCACTGTCTGCGCCG...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCTTCTACCACCTGATATaGATGGTTCCTGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: SRASAGVGSEASRVQDHPFYHLI*MVPGSP
Trigger: AGGACTTCCAGGAACCATCAATATCAGGTGGTAGAA...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp AAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCCCTGGTTCAGACCCTATaGACCCAGGACCTCTTAATC +
Preference number: 5 (lower is better)
Translates to: KHLLHPWNLLNPGGGGCPLVQTL*TQDLLI
Trigger: GATTAAGAGGTCCTGGGTCAATAGGGTCTGAACCAG...GGGGCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp TCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGGGTCCAGGACCATCCCTATCTGTTTCATCCATaGACCCGATTTCCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: SRASAGVGSEASRVQDHPYLFHP*TRFPWN
Trigger: GTTCCAGGGAAATCGGGTCAATGGATGAAACAGATA...GGGATGGTCCTGGACCCTTGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCCCAGGACTTGAACCTTaGCTATCCAGGGACCATGGG +
Preference number: 5 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCPGLEP*LSRDHG
Trigger: CCCATGGTCCCTGGATAGCAAAGGTTCAAGTCCTGG...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS TCA 90 bp CACTGGCCTCCAGTTCTGTGGAGAAGACCACAGCATCCTCCACCTTaGCCTGGTAAATGCCAGAGTCCTCAGGCCTCAGGTCTTGAATCT +
Preference number: 5 (lower is better)
Translates to: HWPPVLWRRPQHPPP*PGKCQSPQASGLES
Trigger: AGATTCAAGACCTGAGGCCTGAGGACTCTGGCATTTACCAGGTCAAGGTGGAGGATGCTGTGGTCTTCTCCACAGAACTGGAGGCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS GCA 90 bp TCACCAGCTACAAAGGTGTACCTCCCAGCTTGGGTCCCCTGCACATaGGTGATGAAGAGGCTGTGCACGAGACCGTCTTGCTTAAAGATG +
Preference number: 5 (lower is better)
Translates to: SPATKVYLPAWVPCT*VMKRLCTRPSCLKM
Trigger: CATCTTTAAGCAAGACGGTCTCGTGCACAGCCTCTTCATCACGCATGTGCAGGGGACCCAAGCTGGGAGGTACACCTTTGTAGCTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000473483.1
CDS GCA 90 bp AATTCCCCTTGCCCAGGATACCTGAGTCCTCTGCATCAACAGAACTaGCCCTTCCAGGACTTGAACCTTTGCTATCCAGGGACCATGGGC +
Preference number: 5 (lower is better)
Translates to: NSPCPGYLSPLHQQN*PFQDLNLCYPGTMG
Trigger: GCCCATGGTCCCTGGATAGCAAAGGTTCAAGTCCTGGAAGGGGCAGTTCTGTTGATGCAGAGGACTCAGGTATCCTGGGCAAGGGGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 90 bp CAGCACTCCAGGCCCATGGTGGGCCCCAGTTTTTCTGAGGCTAGATaGTGTGTCATCCCAAGGACTTGTGCCCTTAGATTCTATTCTGCC +
Preference number: 5 (lower is better)
Translates to: QHSRPMVGPSFSEAR*CVIPRTCALRFYSA
Trigger: GGCAGAATAGAATCTAAGGGCACAAGTCCTTGGGATGACACACCATCTAGCCTCAGAAAAACTGGGGCCCACCATGGGCCTGGAGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 90 bp ATGCTACCCAATATCCTGACCTGTGACCCATGGCTTTATGGCCTCTaGGTCCAGCCTCATGTCCTATTCCAGCCAGTGAGCCTGGTACTC +
Preference number: 5 (lower is better)
Translates to: MLPNILTCDPWLYGL*VQPHVLFQPVSLVL
Trigger: GAGTACCAGGCTCACTGGCTGGAATAGGACATGAGGCTGGACCCAGAGGCCATAAAGCCATGGGTCACAGGTCAGGATATTGGGTAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 90 bp CTTGCCATCAAGAAACCCAGAAGCCCCCATTATCCCTGCTTGGTCTaGAGACCTATCCTTCACCCTGGGAGCCCCTCTGTCTCTAGAAGA +
Preference number: 5 (lower is better)
Translates to: LAIKKPRSPHYPCLV*RPILHPGSPSVSRR
Trigger: TCTTCTAGAGACAGAGGGGCTCCCAGGGTGAAGGATAGGTCTCCAGACCAAGCAGGGATAATGGGGGCTTCTGGGTTTCTTGATGGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp CAGCCCTATGGCAATCCTGAACCTCCATGGGGCCTTGTGGGGGATCAGGCTTGTGAGGAGATCTTGTACTaGCTGGAATCACTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: QPYGNPEPPWGLVGDQACEEILY*LESLRS
Trigger: TGACCTCAGTGATTCCAGCAAGTACAAGATCTCCTC...ACAAGCCTGATCCCCCACAAGGCCCCATGGAGGTTCAGGATTGCCATAGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGGTGGCCCATGGGGCCTaGGGCATCCTTGGAGAAACT +
Preference number: 5 (lower is better)
Translates to: SGSPEAKKKETHMVRVQEVAHGA*GILGET
Trigger: AGTTTCTCCAAGGATGCCCAAGGCCCCATGGGCCAC...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp ATCCTTAGTGACAGTCACACTTCTTTTGGGCAAGGGCAAGCCATCCTTCAGCCAAGGCTGCGGTCATTCTaGAACCAGGTGACGTGGGGC +
Preference number: 5 (lower is better)
Translates to: ILSDSHTSFGQGQAILQPRLRSF*NQVTWG
Trigger: GCCCCACGTCACCTGGTTCAAGAATGACCGCAGCCT...TGGCTGAAGGATGGCTTGCCCTTGCCCAAAAGAAGTGTGACTGTCACTAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCGGTTCCTGGAAGTCCTaGCCTCCAGGTATCTGTTCT +
Preference number: 5 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCGSWKS*PPGICS
Trigger: AGAACAGATACCTGGAGGCAAGGACTTCCAGGAACC...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp CCATCCTTGGGATTGGCTTCCCGGGCCAGTGCAGGTGTCGGAAGTGAAGCTTCAAGTCCCAGAACTGTCTaGCCATTCTTTGACATCTGG +
Preference number: 5 (lower is better)
Translates to: PSLGLASRASAGVGSEASSPRTV*PFFDIW
Trigger: CCAGATGTCAAAGAATGGCAAGACAGTTCTGGGACT...TGAAGCTTCACTTCCGACACCTGCACTGGCCCGGGAAGCCAATCCCAAGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp ATCCTTAGTGACAGTCACACTTCTTTTGGGCAAGGGCAAGCCATCCTTCAGCCAGGGATCAGGCTTGTCTaGCTGGCACCACTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: ILSDSHTSFGQGQAILQPGIRLV*LAPLRA
Trigger: AGCCCTGAGTGGTGCCAGCAAGACAAGCCTGATCCC...TGGCTGAAGGATGGCTTGCCCTTGCCCAAAAGAAGTGTGACTGTCACTAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS GCA 90 bp TCTTCATCTCCTGCAGCCTGCGCAACATGCCACGGTAGTCGACGATaGCATACTTCAAGCAGATCTTCTCGTAGTCCTTCCTGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SSSPAACATCHGSRR*HTSSRSSRSPSCLL
Trigger: CAGCAGACAGGAAGGACTACGAGAAGATCTGCTTGAAGTATGGCATCGTCGACTACCGTGGCATGTTGCGCAGGCTGCAGGAGATGAAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS CCA 90 bp CGTCTTTGCCACTTCTCCTGCTCTGCAGTTTGTGGTCAGCACTTGTaGACTGAAGGTCTTTATCCTTCCCAGCTTCAACCACCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: RLCHFSCSAVCGQHL*TEGLYPSQLQPPAR
Trigger: CCTGGCTGGTGGTTGAAGCTGGGAAGGATAAAGACCTTCAGTCCACAAGTGCTGACCACAAACTGCAGAGCAGGAGAAGTGGCAAAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000437879.6
CDS CCA 90 bp TTCTCCCGGGACCTTCCAAGCCATCCTTATAGCCTGTCTCACCTCTaGGTCCTTTTACTCTGGAGCTCCCTGACCCATTCCAGAAATCTG +
Preference number: 5 (lower is better)
Translates to: FSRDLPSHPYSLSHL*VLLLWSSLTHSRNL
Trigger: CAGATTTCTGGAATGGGTCAGGGAGCTCCAGAGTAAAAGGACCCAGAGGTGAGACAGGCTATAAGGATGGCTTGGAAGGTCCCGGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGTCGCCTGTCAGCTTGTaGATCTGCAGCACGTGCTCC +
Preference number: 5 (lower is better)
Translates to: SGSPEAKKKETHMVRVQESPVSL*ICSTCS
Trigger: GGAGCACGTGCTGCAGATCAACAAGCTGACAGGCGA...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp GCTCAGAGTGATGCTGGTGTTCGATCTGTCTGTGACTTGGAGATTCCTCACCAGCTGCCAGTGCCAGGCTaGTATCTGGATGTGGAACTC +
Preference number: 5 (lower is better)
Translates to: AQSDAGVRSVCDLEIPHQLPVPG*YLDVEL
Trigger: GAGTTCCACATCCAGATACAAGCCTGGCACTGGCAG...CTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGCATCACTCTGAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTTCAGGAGCCCAAGCATaGCTCGTCCCTTGTCTATCA +
Preference number: 5 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPSGAQA*LVPCLS
Trigger: TGATAGACAAGGGACGAGCAATGCTTGGGCTCCTGA...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp AGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGGAGGTGGAGGCTGCAGCATCTATGCTGCCTaGGCTAAACCCCTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: RKHLLHPWNLLNPGGGGCSIYAA*AKPLVF
Trigger: GAAAACCAGGGGTTTAGCCAAGGCAGCATAGATGCT...GCAGCCTCCACCTCCTGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS TCA 90 bp TTGGAGTTCGTGTCACCCTCTGATGCTACCCAATATCCTGACCTGTaGCCCATGGCTTTATGGCCTCTGGGTCCAGCCTCATGTCCTATT +
Preference number: 5 (lower is better)
Translates to: LEFVSPSDATQYPDL*PMALWPLGPASCPI
Trigger: AATAGGACATGAGGCTGGACCCAGAGGCCATAAAGCCATGGGTCACAGGTCAGGATATTGGGTAGCATCAGAGGGTGACACGAACTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 90 bp AGACCTATCCTTCACCCTGGGAGCCCCTCTGTCTCTAGAAGACCCTaGAGTCCCAGAACTGTCTTGCCATTCTTTGACATCTGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: RPILHPGSPSVSRRP*SPRTVLPFFDIWFS
Trigger: GGAAAACCAGATGTCAAAGAATGGCAAGACAGTTCTGGGACTCCAGGGTCTTCTAGAGACAGAGGGGCTCCCAGGGTGAAGGATAGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp AGTGATGCTGGTGTTCGATCTGTCTGTGACTTGGAGATTCCTCACCAGCCCAGGAGTTCTGCCTCCTCTTaGACTCCTCTGAGGGTAGAA +
Preference number: 5 (lower is better)
Translates to: SDAGVRSVCDLEIPHQPRSSASS*TPLRVE
Trigger: TTCTACCCTCAGAGGAGTCAAAGAGGAGGCAGAACT...CCTGGGCTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGCATCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS-3UTR CAA 90 bp CTTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCAAGCTGGAGATGGTGTaGATGTACTGTGCCATCTTG +
Preference number: 5 (lower is better)
Translates to: LHVLLAKTSPGIFSLPFSKLEMV*MYCAIL
Trigger: CAAGATGGCACAGTACATCAACACCATCTCCAGCTT...GGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp GCTCAGAGTGATGCTGGTGTTCGATCTGTCTGTGACTTGGAGATTCCTCACCAGACAGTCACACTTCTTTaGGGCAAGGGCAAGCCATCC +
Preference number: 5 (lower is better)
Translates to: AQSDAGVRSVCDLEIPHQTVTLL*GKGKPS
Trigger: GGATGGCTTGCCCTTGCCCAAAAGAAGTGTGACTGT...CTGGTGAGGAATCTCCAAGTCACAGACAGATCGAACACCAGCATCACTCTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437879.6
CDS TCA 90 bp CATAGCGCTTCCCCAGCCGGCGCAGACAGTGCTTGGTTTGGTTGTTaGAGCCATAGGGGATCATCTCACCATCCTTATACAGGTAAATCT +
Preference number: 5 (lower is better)
Translates to: HSASPAGADSAWFGC*SHRGSSHHPYTGKS
Trigger: AGATTTACCTGTATAAGGATGGTGAGATGATCCCCTATGGCTTCAACAACCAAACCAAGCACTGTCTGCGCCGGCTGGGGAAGCGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp TTCACGTCCTCCTGGCCAAAACCTCGCCAGGCATCTTCTCACTCCCATTTTCCTTTTGCATTCCCATCCTaGGTGACCCTGATGTGTCTT +
Preference number: 5 (lower is better)
Translates to: FTSSWPKPRQASSHSHFPFAFPS*VTLMCL
Trigger: AAGACACATCAGGGTCACCAAGGATGGGAATGCAAA...AGGAAAATGGGAGTGAGAAGATGCCTGGCGAGGTTTTGGCCAGGAGGACGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGCTCAGGCCTCAGGTCTaGAATCTGGAACTCATAGCG +
Preference number: 5 (lower is better)
Translates to: SGSPEAKKKETHMVRVQELRPQV*NLELIA
Trigger: CGCTATGAGTTCCAGATTCAAGACCTGAGGCCTGAG...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTCTGGTGTCCGAGGGTTaGCTGGCCCCCAGCTCATTC +
Preference number: 5 (lower is better)
Translates to: NVLMKKRIESTCCTPGISLVSEG*LAPSSF
Trigger: GAATGAGCTGGGGGCCAGCAAACCCTCGGACACCAG...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCATTCTCAGCCACAGCCTaGTACTCCCCGCTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPFSATA*YSPLSF
Trigger: GAAGGACAGCGGGGAGTACAAGGCTGTGGCTGAGAA...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGGAGGAGATCTTGTACTaGCTGGAATCACTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: SGSPEAKKKETHMVRVQEEEILY*LESLRS
Trigger: TGACCTCAGTGATTCCAGCAAGTACAAGATCTCCTC...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp TCTGGATCTCCTGAAGCGAAGAAGAAAGAAACCCATATGGTGAGGGTCCAGGAGTTCGCTGTCATTCTGTaGAGTGACTTAGCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: SGSPEAKKKETHMVRVQEFAVIL*SDLAWS
Trigger: GCTCCAAGCTAAGTCACTCAACAGAATGACAGCGAA...CTCCTGGACCCTCACCATATGGGTTTCTTTCTTCTTCGCTTCAGGAGATCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS GCA 90 bp GACGATGCCATACTTCAAGCAGATCTTCTCGTAGTCCTTCCTGTCTaGTGTCATCAGCAGCTGCCATATCTGCTCAAGGTCCATCTTTTT +
Preference number: 5 (lower is better)
Translates to: DDAILQADLLVVLPV*CHQQLPYLLKVHLF
Trigger: AAAAAGATGGACCTTGAGCAGATATGGCAGCTGCTGATGACAGCAGACAGGAAGGACTACGAGAAGATCTGCTTGAAGTATGGCATCGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS-3UTR CAA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCATGTGGGGGATCAGGCTaGTCTATGACTTGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPCGGSG*SMTCRV
Trigger: CACTCTGCAAGTCATAGACAAGCCTGATCCCCCACA...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCACTATCTGCTTTCCTCTaGGCCAGGACCCTACAGGAT +
Preference number: 5 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPLSAFL*ARTLQD
Trigger: ATCCTGTAGGGTCCTGGCCAAGAGGAAAGCAGATAG...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS-3UTR CAA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTCACTGAGGTCACCTTaGGAGTTCTGCCAACGCACC +
Preference number: 5 (lower is better)
Translates to: NVLMKKRIESTCCTPGISSLRSP*EFCQRT
Trigger: GGTGCGTTGGCAGAACTCCAAAGGTGACCTCAGTGA...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAGAGGAGATCTTGTACTaGCTGGAATCACTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPEEILY*LESLRS
Trigger: TGACCTCAGTGATTCCAGCAAGTACAAGATCTCCTC...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp AATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTTGAATCCAAAGCTGGAGATGGTGTaGATGTACTGTGCCATCTTG +
Preference number: 5 (lower is better)
Translates to: NEETHRKHLLHPWNLLNPKLEMV*MYCAIL
Trigger: CAAGATGGCACAGTACATCAACACCATCTCCAGCTT...TGGATTCAAGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTCTCAGGCCTCAGGTCTaGAATCTGGAACTCATAGCG +
Preference number: 5 (lower is better)
Translates to: NVLMKKRIESTCCTPGISLRPQV*NLELIA
Trigger: CGCTATGAGTTCCAGATTCAAGACCTGAGGCCTGAG...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS-3UTR CAA 90 bp AATGTTTTAATGAAGAAACGCATAGAAAGCACTTGCTGCACCCCTGGAATCTCTCAGACAGTGCTTGGTTaGGTTGTTGAAGCCATAGGG +
Preference number: 5 (lower is better)
Translates to: NVLMKKRIESTCCTPGISQTVLG*VVEAIG
Trigger: CCCTATGGCTTCAACAACCAAACCAAGCACTGTCTG...AGAGATTCCAGGGGTGCAGCAAGTGCTTTCTATGCGTTTCTTCATTAAAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS CCA 72 bp CCATGGGCTTCGGCATCCACCAGCCGCCTCTTGGCCTaGTGCACCCTCCCCACCCTTAAAGCCCCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: PWASASTSRLLA*CTLPTLKAPWP
Trigger: GGGCCAGGGGGCTTTAAGGGTGGGGAGGGTGCACCAGGCCAAGAGGCGGCTGGTGGATGCCGAAGCCCATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CAA 90 bp ACCAGACTCCGTCAGTCCAGCCACCCAGATACCACCCATACCCTCTaGTCCTCCACTGGGCCCCAGCACTCCAGGCCCATGGTGGGCCCC +
Preference number: 6 (lower is better)
Translates to: TRLRQSSHPDTTHTL*SSTGPQHSRPMVGP
Trigger: GGGGCCCACCATGGGCCTGGAGTGCTGGGGCCCAGTGGAGGACAAGAGGGTATGGGTGGTATCTGGGTGGCTGGACTGACGGAGTCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 72 bp AGTAGCCATGTCTGCCAAGGCCATCCCTGTCTGGGCTaGCTATGTGCTGGAGCCCAGAAGCCGGCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: SSHVCQGHPCLG*LCAGAQKPAQP
Trigger: GGGCTGGGCCGGCTTCTGGGCTCCAGCACATAGCCAGCCCAGACAGGGATGGCCTTGGCAGACATGGCTACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000444705.2
CDS CCA 72 bp TTCCCTGGGAAGAGTGGCTCTGCTTCCCTCTGCTACTaGAAAGCCCTCGCCCTCCTGTCCAGGGCCCCAGGC +
Preference number: 6 (lower is better)
Translates to: FPGKSGSASLCY*KALALLSRAPG
Trigger: GCCTGGGGCCCTGGACAGGAGGGCGAGGGCTTTCCAGTAGCAGAGGGAAGCAGAGCCACTCTTCCCAGGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000444705.2
CDS GCA 72 bp GGCGTGCTGCAGCCTTCAGGGATCTCCTCCACCAGCTaGCAGATGCTCACTCCAGGGATGTGGGACTTCCGG +
Preference number: 6 (lower is better)
Translates to: GVLQPSGISSTS*QMLTPGMWDFR
Trigger: CCGGAAGTCCCACATCCCTGGAGTGAGCATCTGGCAGCTGGTGGAGGAGATCCCTGAAGGCTGCAGCACGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS GCA 72 bp TCCTCAGTGTCACGCTGTACTGGCCACAGTCCTTCCTaGCTGCGCTGGGGAGGCACAGCCGCGTGTAGCCAT +
Preference number: 6 (lower is better)
Translates to: SSVSRCTGHSPS*LRWGGTAACSH
Trigger: ATGGCTACACGCGGCTGTGCCTCCCCAGCGCAGGCAGGAAGGACTGTGGCCAGTACAGCGTGACACTGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000473483.1
CDS GCA 72 bp GTCACCCCAGGACTCCCTAGGCCACCATCTGAATGGTaGCCTCCCCTAGGGTCCATGCCTGCCTGGCATGCA +
Preference number: 6 (lower is better)
Translates to: VTPGLPRPPSEW*PPLGSMPAWHA
Trigger: TGCATGCCAGGCAGGCATGGACCCTAGGGGAGGGCACCATTCAGATGGTGGCCTAGGGAGTCCTGGGGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 72 bp CAAGGAGTAGCCATGTCTGCCAAGGCCATCCCTGTCTaGGCTGGCTATGTGCTGGAGCCCAGAAGCCGGCCC +
Preference number: 6 (lower is better)
Translates to: QGVAMSAKAIPV*AGYVLEPRSRP
Trigger: GGGCCGGCTTCTGGGCTCCAGCACATAGCCAGCCCAGACAGGGATGGCCTTGGCAGACATGGCTACTCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000444705.2
CDS CCA 72 bp CCTGTCACCCCAGGACTCCCTAGGCCACCATCTGAATaGTGCCCTCCCCTAGGGTCCATGCCTGCCTGGCAT +
Preference number: 6 (lower is better)
Translates to: PVTPGLPRPPSE*CPPLGSMPAWH
Trigger: ATGCCAGGCAGGCATGGACCCTAGGGGAGGGCACCATTCAGATGGTGGCCTAGGGAGTCCTGGGGTGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 72 bp GAGGCTGTCTCTGTGTGCCATGCCACCTGCAGTGCCTaGCATTCCAGCCATCCCAGGTTCCACCCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: EAVSVCHATCSA*HSSHPRFHPRS
Trigger: GGACCTGGGGTGGAACCTGGGATGGCTGGAATGCCAGGCACTGCAGGTGGCATGGCACACAGAGACAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CAA 72 bp CGTCAGTCCAGCCACCCAGATACCACCCATACCCTCTaGTCCTCCACTGGGCCCCAGCACTCCAGGCCCATG +
Preference number: 6 (lower is better)
Translates to: RQSSHPDTTHTL*SSTGPQHSRPM
Trigger: CATGGGCCTGGAGTGCTGGGGCCCAGTGGAGGACAAGAGGGTATGGGTGGTATCTGGGTGGCTGGACTGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS TCA 72 bp TGGAAAGCCCTCGCCCTCCTGTCCAGGGCCCCAGGCTaGGTCAGCTGTCCCTTTGTCCCCCATCAAGGAGTA +
Preference number: 6 (lower is better)
Translates to: WKALALLSRAPG*VSCPFVPHQGV
Trigger: TACTCCTTGATGGGGGACAAAGGGACAGCTGACTCAGCCTGGGGCCCTGGACAGGAGGGCGAGGGCTTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000444705.2
CDS GCA 72 bp GGGCTGGAGAGGGTACATTCAAAGACTGCGTCACCCTaGTCCTCACAGTGGGTCTCCGCCAGTGGGACCACC +
Preference number: 6 (lower is better)
Translates to: GLERVHSKTASP*SSQWVSASGTT
Trigger: GGTGGTCCCACTGGCGGAGACCCACTGTGAGGAGCAGGGTGACGCAGTCTTTGAATGTACCCTCTCCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000444705.2
CDS GCA 72 bp CAACCACCAGCCAGGCGCTGGAAGTGTAGAGCCCGGTaGCCAGCGAATAGGGGCCCATGTCTGAGAAACGTG +
Preference number: 6 (lower is better)
Translates to: QPPARRWKCRAR*PANRGPCLRNV
Trigger: CACGTTTCTCAGACATGGGCCCCTATTCGCTGGGCACCGGGCTCTACACTTCCAGCGCCTGGCTGGTGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000444705.2
CDS GCA 72 bp TGTGCCCCTGAGGCTGTCTCTGTGTGCCATGCCACCTaGAGTGCCTGGCATTCCAGCCATCCCAGGTTCCAC +
Preference number: 6 (lower is better)
Translates to: CAPEAVSVCHAT*SAWHSSHPRFH
Trigger: GTGGAACCTGGGATGGCTGGAATGCCAGGCACTGCAGGTGGCATGGCACACAGAGACAGCCTCAGGGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CAA 90 bp GGCCTCGCTCTGCTGGTCACCAGCTACAAAGGTGTACCTCCCAGCTaGGGTCCCCTGCACATGCGTGATGAAGAGGCTGTGCACGAGACC +
Preference number: 6 (lower is better)
Translates to: GLALLVTSYKGVPPS*GPLHMRDEEAVHET
Trigger: GGTCTCGTGCACAGCCTCTTCATCACGCATGTGCAGGGGACCCAAGCTGGGAGGTACACCTTTGTAGCTGGTGACCAGCAGAGCGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000473483.1
CDS TCA 72 bp GCCCTACTTAGCCAGTGGCTTCTGGCATCCACCCCCTaGCCAGACTCCGTCAGTCCAGCCACCCAGATACCA +
Preference number: 6 (lower is better)
Translates to: ALLSQWLLASTP*PDSVSPATQIP
Trigger: TGGTATCTGGGTGGCTGGACTGACGGAGTCTGGTCAGGGGGTGGATGCCAGAAGCCACTGGCTAAGTAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 72 bp TACCCTGGGTGTACAGCTGACCTCCCGCTTCCTGTCTaGTCCCTCTTCCCCGTTTCCAGCTGCTGCTTGCTG +
Preference number: 6 (lower is better)
Translates to: YPGCTADLPLPV*SLFPVSSCCLL
Trigger: CAGCAAGCAGCAGCTGGAAACGGGGAAGAGGGAGCAGACAGGAAGCGGGAGGTCAGCTGTACACCCAGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS GCA 72 bp TTTTTCCCCTCTGGCAGAGCCGAGGTGACGGGCTTCTaGTCAAAGTCCGGCGTGCTGCAGCCTTCAGGGATC +
Preference number: 6 (lower is better)
Translates to: FFPSGRAEVTGF*SKSGVLQPSGI
Trigger: GATCCCTGAAGGCTGCAGCACGCCGGACTTTGAGCAGAAGCCCGTCACCTCGGCTCTGCCAGAGGGGAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS GCA 72 bp ACTAGGGCAGGGGCTGGAGAGGGTACATTCAAAGACTaGGTCACCCTGCTCCTCACAGTGGGTCTCCGCCAG +
Preference number: 6 (lower is better)
Translates to: TRAGAGEGTFKD*VTLLLTVGLRQ
Trigger: CTGGCGGAGACCCACTGTGAGGAGCAGGGTGACGCAGTCTTTGAATGTACCCTCTCCAGCCCCTGCCCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000444705.2
CDS GCA 72 bp GTAGGGGAATCCTGGACGGTCAGGGTGGCCTCGCTCTaGTGGTCACCAGCTACAAAGGTGTACCTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: VGESWTVRVASL*WSPATKVYLPA
Trigger: AGCTGGGAGGTACACCTTTGTAGCTGGTGACCAGCAGAGCGAGGCCACCCTGACCGTCCAGGATTCCCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000473483.1
CDS GCA 72 bp GGTCCCAGTCGAGCATCCCACAGTTGCTCTGGGGCATaGCTGTCCAGTTGTCTTCCACTGTCCCCTCTGTGC +
Preference number: 6 (lower is better)
Translates to: GPSRASHSCSGA*LSSCLPLSPLC
Trigger: GCACAGAGGGGACAGTGGAAGACAACTGGACAGGCATGCCCCAGAGCAACTGTGGGATGCTCGACTGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 72 bp TCCTGCAGAGAACCGGAAGCTCTGGAGCCTGCGGGCTaGTTCCCAGCATCTATGCTGCCTTGGCTAAACCCC +
Preference number: 6 (lower is better)
Translates to: SCREPEALEPAG*FPASMLPWLNP
Trigger: GGGGTTTAGCCAAGGCAGCATAGATGCTGGGAAGCAGCCCGCAGGCTCCAGAGCTTCCGGTTCTCTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 72 bp CCTTCATGGGTCCCACCAAAAGCGGCATCTTTCTCCTaGAGAGAACCGGAAGCTCTGGAGCCTGCGGGCTGC +
Preference number: 6 (lower is better)
Translates to: PSWVPPKAASFS*REPEALEPAGC
Trigger: GCAGCCCGCAGGCTCCAGAGCTTCCGGTTCTCTGCAGGAGAAAGATGCCGCTTTTGGTGGGACCCATGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 72 bp GGGCTGGTACCTATGACTTGCAGAGTGAGCTCGGCCTaGACAGAGCCTCCCTCACTCCTCAGTGTCACGCTG +
Preference number: 6 (lower is better)
Translates to: GLVPMTCRVSSA*TEPPSLLSVTL
Trigger: CAGCGTGACACTGAGGAGTGAGGGAGGCTCTGTGCAGGCCGAGCTCACTCTGCAAGTCATAGGTACCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473483.1
CDS CCA 72 bp CTTTATCCTTCCCAGCTTCAACCACCAGCCAGGCGCTaGAAGTGTAGAGCCCGGTGCCCAGCGAATAGGGGC +
Preference number: 6 (lower is better)
Translates to: LYPSQLQPPARR*KCRARCPANRG
Trigger: GCCCCTATTCGCTGGGCACCGGGCTCTACACTTCCAGCGCCTGGCTGGTGGTTGAAGCTGGGAAGGATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000444705.2
CDS CCA 72 bp TCTCCCAGGTCCCAGTCGAGCATCCCACAGTTGCTCTaGGGCATGCCTGTCCAGTTGTCTTCCACTGTCCCC +
Preference number: 6 (lower is better)
Translates to: SPRSQSSIPQLL*GMPVQLSSTVP
Trigger: GGGGACAGTGGAAGACAACTGGACAGGCATGCCCCAGAGCAACTGTGGGATGCTCGACTGGGACCTGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CAA 90 bp GGGCTGGAGGAGATCTTGTACTTGCTGGAATCACTGAGGTCACCTTaGGAGTTCTGCCAACGCACCTCGGGCCTGGGCTCCCCACAGACC +
Preference number: 6 (lower is better)
Translates to: GLEEILYLLESLRSP*EFCQRTSGLGSPQT
Trigger: GGTCTGTGGGGAGCCCAGGCCCGAGGTGCGTTGGCAGAACTCCAAAGGTGACCTCAGTGATTCCAGCAAGTACAAGATCTCCTCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS CAA 90 bp ACCAGCCGGTGGGTCAGCCCGTCAGGGGACACATACACTTCATATTaGTCACTGGGGTGGAGTAGCCGGTGCCGGAAATGCCAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: TSRWVSPSGDTYTSY*SLGWSSRCRKCQAA
Trigger: TGCAGCCTGGCATTTCCGGCACCGGCTACTCCACCCCAGTGACAAATATGAAGTGTATGTGTCCCCTGACGGGCTGACCCACCGGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000444705.2
CDS TCA 72 bp GAAAGACAGCATTTTTCCCCTCTGGCAGAGCCGAGGTaGCGGGCTTCTGCTCAAAGTCCGGCGTGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: ERQHFSPLAEPR*RASAQSPACCS
Trigger: GCTGCAGCACGCCGGACTTTGAGCAGAAGCCCGTCACCTCGGCTCTGCCAGAGGGGAAAAATGCTGTCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS TCA 72 bp TCCCTGGCTCTCGATGCTCCCAGACTCTTCTGCTCCTaGTGCCTGGGCTCCTTGCCTCTGCAGTTTGTGGTC +
Preference number: 6 (lower is better)
Translates to: SLALDAPRLFCS*CLGSLPLQFVV
Trigger: GACCACAAACTGCAGAGGCAAGGAGCCCAGGCATCAGGAGCAGAAGAGTCTGGGAGCATCGAGAGCCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000444705.2
CDS TCA 72 bp CTGGCTCCCAGAAGCGGCCCCATTGTGAGGTGCGAGTaGCTCAGGGTGCCTGGTATCATCCCTATAACCAGC +
Preference number: 6 (lower is better)
Translates to: LAPRSGPIVRCE*LRVPGIIPITS
Trigger: GCTGGTTATAGGGATGATACCAGGCACCCTGAGTCACTCGCACCTCACAATGGGGCCGCTTCTGGGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 72 bp TACTTGCTGGAATCACTGAGGTCACCTTTGGAGTTCTaGCAACGCACCTCGGGCCTGGGCTCCCCACAGACC +
Preference number: 6 (lower is better)
Translates to: YLLESLRSPLEF*QRTSGLGSPQT
Trigger: GGTCTGTGGGGAGCCCAGGCCCGAGGTGCGTTGGCAGAACTCCAAAGGTGACCTCAGTGATTCCAGCAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS GCA 72 bp CTGAGCAAGCGGCCTCTCCGTACGCATTTACTGCTGTaGAGCGGTACAGATCCGTGTCCTCGCCTGTCAGCT +
Preference number: 6 (lower is better)
Translates to: LSKRPLRTHLLL*SGTDPCPRLSA
Trigger: AGCTGACAGGCGAGGACACGGATCTGTACCGCTGCACAGCAGTAAATGCGTACGGAGAGGCCGCTTGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS GCA 72 bp CCAGCTACAAAGGTGTACCTCCCAGCTTGGGTCCCCTaGACATGCGTGATGAAGAGGCTGTGCACGAGACCG +
Preference number: 6 (lower is better)
Translates to: PATKVYLPAWVP*TCVMKRLCTRP
Trigger: CGGTCTCGTGCACAGCCTCTTCATCACGCATGTGCAGGGGACCCAAGCTGGGAGGTACACCTTTGTAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000473483.1
CDS GCA 72 bp TTGATTTTCCCTGGGAAGAGTGGCTCTGCTTCCCTCTaGTACTGGAAAGCCCTCGCCCTCCTGTCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: LIFPGKSGSASL*YWKALALLSRA
Trigger: GGCCCTGGACAGGAGGGCGAGGGCTTTCCAGTAGCAGAGGGAAGCAGAGCCACTCTTCCCAGGGAAAATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000444705.2
CDS CCA 72 bp CGGCCCCATTGTGAGGTGCGAGTGACTCAGGGTGCCTaGTATCATCCCTATAACCAGCTCCAGCTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: RPHCEVRVTQGA*YHPYNQLQLQR
Trigger: CCTCTGGAGCTGGAGCTGGTTATAGGGATGATACCAGGCACCCTGAGTCACTCGCACCTCACAATGGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 72 bp GAGGGCCCAGAACCCCAGGGACTCTCAGGCCTTAGTTaGGGGAAGACAGGGCTGGTACCTATGACTTGCAGA +
Preference number: 6 (lower is better)
Translates to: EGPEPQGLSGLS*GKTGLVPMTCR
Trigger: TCTGCAAGTCATAGGTACCAGCCCTGTCTTCCCCCAACTAAGGCCTGAGAGTCCCTGGGGTTCTGGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473483.1
CDS CAA 90 bp CAAATGAGGATCAGAGCCAGCAGAGATCATATCCCAGGCCTGCCCTaGATGGCAGGGAGGGCCCAGAACCCCAGGGACTCTCAGGCCTTA +
Preference number: 6 (lower is better)
Translates to: QMRIRASRDHIPGLP*MAGRAQNPRDSQAL
Trigger: TAAGGCCTGAGAGTCCCTGGGGTTCTGGGCCCTCCCTGCCATCAAGGGCAGGCCTGGGATATGATCTCTGCTGGCTCTGATCCTCATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473483.1
CDS CAA 90 bp CTCCACCTTGACCTGGTAAATGCCAGAGTCCTCAGGCCTCAGGTCTaGAATCTGGAACTCATAGCGCTTCCCCAGCCGGCGCAGACAGTG +
Preference number: 6 (lower is better)
Translates to: LHLDLVNARVLRPQV*NLELIALPQPAQTV
Trigger: CACTGTCTGCGCCGGCTGGGGAAGCGCTATGAGTTCCAGATTCAAGACCTGAGGCCTGAGGACTCTGGCATTTACCAGGTCAAGGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS CAA 90 bp CCCATGGGGCCTTGGGCATCCTTGGAGAAACTGCCAGTGCCAGGCTaGTATCTGGATGTGGAACTCCGGGTAGCATCTCTCCTCTCTCCA +
Preference number: 6 (lower is better)
Translates to: PMGPWASLEKLPVPG*YLDVELRVASLLSP
Trigger: TGGAGAGAGGAGAGATGCTACCCGGAGTTCCACATCCAGATACAAGCCTGGCACTGGCAGTTTCTCCAAGGATGCCCAAGGCCCCATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000473483.1
CDS TCA 72 bp GCCCAAGGCCCCTTGACCTTTCTCCATAGGCTGTTCTaGCCCCAGTTCCCTGAGGCCCTGGAAGTTCTGATC +
Preference number: 6 (lower is better)
Translates to: AQGPLTFLHRLF*PQFPEALEVLI
Trigger: GATCAGAACTTCCAGGGCCTCAGGGAACTGGGGTCAGAACAGCCTATGGAGAAAGGTCAAGGGGCCTTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS TCA 72 bp CTTGCCTCGCTGAGAGCTCAGGTCCTGGGTCCCTCCTaGCCTATCTCTAGAGGCTTTTCTGCCAAAGGGACC +
Preference number: 6 (lower is better)
Translates to: LASLRAQVLGPS*PISRGFSAKGT
Trigger: GGTCCCTTTGGCAGAAAAGCCTCTAGAGATAGGTCAGGAGGGACCCAGGACCTGAGCTCTCAGCGAGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000473483.1
CDS GCA 72 bp TACACTTCATATTTGTCACTGGGGTGGAGTAGCCGGTaGCGGAAATGCCAGGCTGCACTAGGGCAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: YTSYLSLGWSSR*RKCQAALGQGL
Trigger: CAGCCCCTGCCCTAGTGCAGCCTGGCATTTCCGGCACCGGCTACTCCACCCCAGTGACAAATATGAAGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000444705.2
CDS GCA 72 bp AGTGGCCCATGGGGCCTTGGGCATCCTTGGAGAAACTaGCAGTGCCAGGCTTGTATCTGGATGTGGAACTCC +
Preference number: 6 (lower is better)
Translates to: SGPWGLGHPWRN*QCQACIWMWNS
Trigger: GGAGTTCCACATCCAGATACAAGCCTGGCACTGGCAGTTTCTCCAAGGATGCCCAAGGCCCCATGGGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000473483.1
CDS GCA 72 bp TCAGGCTTGTCTATGACTTGCAGAGTGAGCTCGGCCTaGACAGAGCCTCCCTCACTCCTCAGTGTCACGCTG +
Preference number: 6 (lower is better)
Translates to: SGLSMTCRVSSA*TEPPSLLSVTL
Trigger: CAGCGTGACACTGAGGAGTGAGGGAGGCTCTGTGCAGGCCGAGCTCACTCTGCAAGTCATAGACAAGCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS GCA 72 bp CTGTCCCTTTGTCCCCCATCAAGGAGTAGCCATGTCTaGCAAGGCCATCCCTGTCTGGGCTGGCTATGTGCT +
Preference number: 6 (lower is better)
Translates to: LSLCPPSRSSHV*QGHPCLGWLCA
Trigger: AGCACATAGCCAGCCCAGACAGGGATGGCCTTGGCAGACATGGCTACTCCTTGATGGGGGACAAAGGGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000444705.2
CDS GCA 72 bp TTTCCTCTCCCAGGTCCCAGTCGAGCATCCCACAGTTaGTCTGGGGCATGCCTGTCCAGTTGTCTTCCACTG +
Preference number: 6 (lower is better)
Translates to: FPLPGPSRASHS*SGACLSSCLPL
Trigger: CAGTGGAAGACAACTGGACAGGCATGCCCCAGAGCAACTGTGGGATGCTCGACTGGGACCTGGGAGAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 72 bp CCATTCCTGCCCAGGTCTCACCTTCCACTGCCCCCTTaGCATCAAGAAACCCAGAAGCCCCCATTATCCCTG +
Preference number: 6 (lower is better)
Translates to: PFLPRSHLPLPP*HQETQKPPLSL
Trigger: CAGGGATAATGGGGGCTTCTGGGTTTCTTGATGGCAAGGGGGCAGTGGAAGGTGAGACCTGGGCAGGAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 72 bp TCCTCCACCAGCTGCCAGATGCTCACTCCAGGGATGTaGGACTTCCGGAGCTTTCCTGCCATAGTTCTGCCT +
Preference number: 6 (lower is better)
Translates to: SSTSCQMLTPGM*DFRSFPAIVLP
Trigger: AGGCAGAACTATGGCAGGAAAGCTCCGGAAGTCCCACATCCCTGGAGTGAGCATCTGGCAGCTGGTGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS CCA 72 bp GCCCGTCAGGGGACACATACACTTCATATTTGTCACTaGGGTGGAGTAGCCGGTGCCGGAAATGCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: ARQGTHTLHICH*GGVAGAGNARL
Trigger: CAGCCTGGCATTTCCGGCACCGGCTACTCCACCCCAGTGACAAATATGAAGTGTATGTGTCCCCTGACGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000444705.2
CDS CCA 72 bp TGCTGGTCACCAGCTACAAAGGTGTACCTCCCAGCTTaGGTCCCCTGCACATGCGTGATGAAGAGGCTGTGC +
Preference number: 6 (lower is better)
Translates to: CWSPATKVYLPA*VPCTCVMKRLC
Trigger: GCACAGCCTCTTCATCACGCATGTGCAGGGGACCCAAGCTGGGAGGTACACCTTTGTAGCTGGTGACCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000473483.1
CDS CCA 72 bp TGCTTTCCTCTTGGCCAGGACCCTACAGGATCAGACTaGCATCCCTGCAGGTCGCTCTTTCCTCTCCCAGGT +
Preference number: 6 (lower is better)
Translates to: CFPLGQDPTGSD*HPCRSLFPLPG
Trigger: ACCTGGGAGAGGAAAGAGCGACCTGCAGGGATGCCAGTCTGATCCTGTAGGGTCCTGGCCAAGAGGAAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CAA 72 bp GACCTGGTAAATGCCAGAGTCCTCAGGCCTCAGGTCTaGAATCTGGAACTCATAGCGCTTCCCCAGCCGGCG +
Preference number: 6 (lower is better)
Translates to: DLVNARVLRPQV*NLELIALPQPA
Trigger: CGCCGGCTGGGGAAGCGCTATGAGTTCCAGATTCAAGACCTGAGGCCTGAGGACTCTGGCATTTACCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS CAA 72 bp CTGCTGGTCACCAGCTACAAAGGTGTACCTCCCAGCTaGGGTCCCCTGCACATGCGTGATGAAGAGGCTGTG +
Preference number: 6 (lower is better)
Translates to: LLVTSYKGVPPS*GPLHMRDEEAV
Trigger: CACAGCCTCTTCATCACGCATGTGCAGGGGACCCAAGCTGGGAGGTACACCTTTGTAGCTGGTGACCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000473483.1
CDS CAA 72 bp GCCATCAAGAAACCCAGAAGCCCCCATTATCCCTGCTaGGTCTGGAGACCTATCCTTCACCCTGGGAGCCCC +
Preference number: 6 (lower is better)
Translates to: AIKKPRSPHYPC*VWRPILHPGSP
Trigger: GGGGCTCCCAGGGTGAAGGATAGGTCTCCAGACCAAGCAGGGATAATGGGGGCTTCTGGGTTTCTTGATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CAA 90 bp TGCAGCACGTGCTCCTTGCTGCCAGGGCTGGAGGAGATCTTGTACTaGCTGGAATCACTGAGGTCACCTTTGGAGTTCTGCCAACGCACC +
Preference number: 6 (lower is better)
Translates to: CSTCSLLPGLEEILY*LESLRSPLEFCQRT
Trigger: GGTGCGTTGGCAGAACTCCAAAGGTGACCTCAGTGATTCCAGCAAGTACAAGATCTCCTCCAGCCCTGGCAGCAAGGAGCACGTGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS GCA 72 bp CTCTGTGGGATTGATTTTCCCTGGGAAGAGTGGCTCTaGTTCCCTCTGCTACTGGAAAGCCCTCGCCCTCCT +
Preference number: 6 (lower is better)
Translates to: LCGIDFPWEEWL*FPLLLESPRPP
Trigger: AGGAGGGCGAGGGCTTTCCAGTAGCAGAGGGAAGCAGAGCCACTCTTCCCAGGGAAAATCAATCCCACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000444705.2
CDS CCA 72 bp CTCCCTCTCTGTGGGATTGATTTTCCCTGGGAAGAGTaGCTCTGCTTCCCTCTGCTACTGGAAAGCCCTCGC +
Preference number: 6 (lower is better)
Translates to: LPLCGIDFPWEE*LCFPLLLESPR
Trigger: GCGAGGGCTTTCCAGTAGCAGAGGGAAGCAGAGCCACTCTTCCCAGGGAAAATCAATCCCACAGAGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000444705.2
CDS CCA 72 bp TGGCCCAGCCTCCCTCTCTGTGGGATTGATTTTCCCTaGGAAGAGTGGCTCTGCTTCCCTCTGCTACTGGAA +
Preference number: 6 (lower is better)
Translates to: WPSLPLCGIDFP*EEWLCFPLLLE
Trigger: TTCCAGTAGCAGAGGGAAGCAGAGCCACTCTTCCCAGGGAAAATCAATCCCACAGAGAGGGAGGCTGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335211.9
ENST00000444705.2
CDS CCA 72 bp AAGAAACCCAGAAGCCCCCATTATCCCTGCTTGGTCTaGAGACCTATCCTTCACCCTGGGAGCCCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: KKPRSPHYPCLV*RPILHPGSPSV
Trigger: GACAGAGGGGCTCCCAGGGTGAAGGATAGGTCTCCAGACCAAGCAGGGATAATGGGGGCTTCTGGGTTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 72 bp CCATCAAGAAACCCAGAAGCCCCCATTATCCCTGCTTaGTCTGGAGACCTATCCTTCACCCTGGGAGCCCCT +
Preference number: 6 (lower is better)
Translates to: PSRNPEAPIIPA*SGDLSFTLGAP
Trigger: AGGGGCTCCCAGGGTGAAGGATAGGTCTCCAGACCAAGCAGGGATAATGGGGGCTTCTGGGTTTCTTGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CAA 72 bp GAGATCTTGTACTTGCTGGAATCACTGAGGTCACCTTaGGAGTTCTGCCAACGCACCTCGGGCCTGGGCTCC +
Preference number: 6 (lower is better)
Translates to: EILYLLESLRSP*EFCQRTSGLGS
Trigger: GGAGCCCAGGCCCGAGGTGCGTTGGCAGAACTCCAAAGGTGACCTCAGTGATTCCAGCAAGTACAAGATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS CAA 72 bp GCCAGCCCTATGGCAATCCTGAACCTCCATGGGGCCTaGTGGGGGATCAGGCTTGTCTATGACTTGCAGAGT +
Preference number: 6 (lower is better)
Translates to: ASPMAILNLHGA*WGIRLVYDLQS
Trigger: ACTCTGCAAGTCATAGACAAGCCTGATCCCCCACAAGGCCCCATGGAGGTTCAGGATTGCCATAGGGCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS CAA 72 bp AGCATCCCACAGTTGCTCTGGGGCATGCCTGTCCAGTaGTCTTCCACTGTCCCCTCTGTGCTCCTTTCCTTC +
Preference number: 6 (lower is better)
Translates to: SIPQLLWGMPVQ*SSTVPSVLLSF
Trigger: GAAGGAAAGGAGCACAGAGGGGACAGTGGAAGACAACTGGACAGGCATGCCCCAGAGCAACTGTGGGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CAA 90 bp AGGTGGCTCTGGAAGGGGATCTTCACTATCACCGGCTTCCCAGCCTaGACCACCAGTGGCTCTCTCAGTTTCTCTGTCACATCTGGAGCA +
Preference number: 6 (lower is better)
Translates to: RWLWKGIFTITGFPA*TTSGSLSFSVTSGA
Trigger: TGCTCCAGATGTGACAGAGAAACTGAGAGAGCCACTGGTGGTCAAGGCTGGGAAGCCGGTGATAGTGAAGATCCCCTTCCAGAGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000473483.1
CDS CAA 90 bp TCTCAGCCAGGCTGTCATCCTGTGAAATCTCTATCTGCTTTCCTCTaGGCCAGGACCCTACAGGATCAGACTGGCATCCCTGCAGGTCGC +
Preference number: 6 (lower is better)
Translates to: SQPGCHPVKSLSAFL*ARTLQDQTGIPAGR
Trigger: GCGACCTGCAGGGATGCCAGTCTGATCCTGTAGGGTCCTGGCCAAGAGGAAAGCAGATAGAGATTTCACAGGATGACAGCCTGGCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CAA 90 bp GGAGTCCCAGAACTGTCTTGCCATTCTTTGACATCTGGTTTTCCCTaGGCACCAGCAGCCTCCGAGGCCTCAGGGATCCCTGAAGTTCCA +
Preference number: 6 (lower is better)
Translates to: GVPELSCHSLTSGFP*APAASEASGIPEVP
Trigger: TGGAACTTCAGGGATCCCTGAGGCCTCGGAGGCTGCTGGTGCCAAGGGAAAACCAGATGTCAAAGAATGGCAAGACAGTTCTGGGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CAA 90 bp GGGAGCCCCTCTGTCTCTAGAAGACCCTGGAGTCCCAGAACTGTCTaGCCATTCTTTGACATCTGGTTTTCCCTTGGCACCAGCAGCCTC +
Preference number: 6 (lower is better)
Translates to: GSPSVSRRPWSPRTV*PFFDIWFSLGTSSL
Trigger: GAGGCTGCTGGTGCCAAGGGAAAACCAGATGTCAAAGAATGGCAAGACAGTTCTGGGACTCCAGGGTCTTCTAGAGACAGAGGGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS TCA 72 bp CAGGGCTGGAGGAGATCTTGTACTTGCTGGAATCACTaGGGTCACCTTTGGAGTTCTGCCAACGCACCTCGG +
Preference number: 6 (lower is better)
Translates to: QGWRRSCTCWNH*GHLWSSANAPR
Trigger: CCGAGGTGCGTTGGCAGAACTCCAAAGGTGACCTCAGTGATTCCAGCAAGTACAAGATCTCCTCCAGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS TCA 72 bp CCAGTTCTGTGGAGAAGACCACAGCATCCTCCACCTTaGCCTGGTAAATGCCAGAGTCCTCAGGCCTCAGGT +
Preference number: 6 (lower is better)
Translates to: PVLWRRPQHPPP*PGKCQSPQASG
Trigger: ACCTGAGGCCTGAGGACTCTGGCATTTACCAGGTCAAGGTGGAGGATGCTGTGGTCTTCTCCACAGAACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS TCA 72 bp GTGTCACCCTCTGATGCTACCCAATATCCTGACCTGTaGCCCATGGCTTTATGGCCTCTGGGTCCAGCCTCA +
Preference number: 6 (lower is better)
Translates to: VSPSDATQYPDL*PMALWPLGPAS
Trigger: TGAGGCTGGACCCAGAGGCCATAAAGCCATGGGTCACAGGTCAGGATATTGGGTAGCATCAGAGGGTGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS TCA 72 bp GTCCTCTGCATCAACAGAACTGCCCCTTCCAGGACTTaGACCTTTGCTATCCAGGGACCATGGGCTTCGGCA +
Preference number: 6 (lower is better)
Translates to: VLCINRTAPSRT*TFAIQGPWASA
Trigger: TGCCGAAGCCCATGGTCCCTGGATAGCAAAGGTTCAAGTCCTGGAAGGGGCAGTTCTGTTGATGCAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 72 bp CCTGCAGCCTGCGCAACATGCCACGGTAGTCGACGATaGCATACTTCAAGCAGATCTTCTCGTAGTCCTTCC +
Preference number: 6 (lower is better)
Translates to: PAACATCHGSRR*HTSSRSSRSPS
Trigger: GGAAGGACTACGAGAAGATCTGCTTGAAGTATGGCATCGTCGACTACCGTGGCATGTTGCGCAGGCTGCAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS GCA 72 bp GCTTGGGTCCCCTGCACATGCGTGATGAAGAGGCTGTaGACGAGACCGTCTTGCTTAAAGATGACTCCATCC +
Preference number: 6 (lower is better)
Translates to: AWVPCTCVMKRL*TRPSCLKMTPS
Trigger: GGATGGAGTCATCTTTAAGCAAGACGGTCTCGTGCACAGCCTCTTCATCACGCATGTGCAGGGGACCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000473483.1
CDS GCA 72 bp CTTGCCATCAAGAAACCCAGAAGCCCCCATTATCCCTaGTTGGTCTGGAGACCTATCCTTCACCCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: LAIKKPRSPHYP*LVWRPILHPGS
Trigger: GCTCCCAGGGTGAAGGATAGGTCTCCAGACCAAGCAGGGATAATGGGGGCTTCTGGGTTTCTTGATGGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 72 bp CATCAACAGAACTGCCCCTTCCAGGACTTGAACCTTTaGTATCCAGGGACCATGGGCTTCGGCATCCACCAG +
Preference number: 6 (lower is better)
Translates to: HQQNCPFQDLNL*YPGTMGFGIHQ
Trigger: CTGGTGGATGCCGAAGCCCATGGTCCCTGGATAGCAAAGGTTCAAGTCCTGGAAGGGGCAGTTCTGTTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 72 bp GACCACCAGTGGCTCTCTCAGTTTCTCTGTCACATCTaGAGCAATGGTAGGGGAATCCTGGACGGTCAGGGT +
Preference number: 6 (lower is better)
Translates to: DHQWLSQFLCHI*SNGRGILDGQG
Trigger: ACCCTGACCGTCCAGGATTCCCCTACCATTGCTCCAGATGTGACAGAGAAACTGAGAGAGCCACTGGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000473483.1
CDS CCA 72 bp AGCCCTATGGCAATCCTGAACCTCCATGGGGCCTTGTaGGGGATCAGGCTTGTCTATGACTTGCAGAGTGAG +
Preference number: 6 (lower is better)
Translates to: SPMAILNLHGAL*GIRLVYDLQSE
Trigger: CTCACTCTGCAAGTCATAGACAAGCCTGATCCCCCACAAGGCCCCATGGAGGTTCAGGATTGCCATAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000335211.9
CDS CCA 72 bp CAAGCCTGGTTTCCCTGGCTCGCTCTGGACCATCCTTaGAGTTCGTGTCACCCTCTGATGCTACCCAATATC +
Preference number: 6 (lower is better)
Translates to: QAWFPWLALDHP*SSCHPLMLPNI
Trigger: GATATTGGGTAGCATCAGAGGGTGACACGAACTCCAAGGATGGTCCAGAGCGAGCCAGGGAAACCAGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 72 bp GGATCCCTGAAGTTCCATAGCCCCCAAGATCTTTGGTaGAGCCTCGCTCATCTGAAAGAGTCTGTCGCCCTC +
Preference number: 6 (lower is better)
Translates to: GSLKFHSPQDLW*SLAHLKESVAL
Trigger: GAGGGCGACAGACTCTTTCAGATGAGCGAGGCTCCACCAAAGATCTTGGGGGCTATGGAACTTCAGGGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 72 bp CAGGGATCCCTGAAGTTCCATAGCCCCCAAGATCTTTaGTGGAGCCTCGCTCATCTGAAAGAGTCTGTCGCC +
Preference number: 6 (lower is better)
Translates to: QGSLKFHSPQDL*WSLAHLKESVA
Trigger: GGCGACAGACTCTTTCAGATGAGCGAGGCTCCACCAAAGATCTTGGGGGCTATGGAACTTCAGGGATCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CAA 72 bp ATAGCGCTTCCCCAGCCGGCGCAGACAGTGCTTGGTTaGGTTGTTGAAGCCATAGGGGATCATCTCACCATC +
Preference number: 6 (lower is better)
Translates to: IALPQPAQTVLG*VVEAIGDHLTI
Trigger: GATGGTGAGATGATCCCCTATGGCTTCAACAACCAAACCAAGCACTGTCTGCGCCGGCTGGGGAAGCGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS CAA 72 bp CCTTGGGCATCCTTGGAGAAACTGCCAGTGCCAGGCTaGTATCTGGATGTGGAACTCCGGGTAGCATCTCTC +
Preference number: 6 (lower is better)
Translates to: PWASLEKLPVPG*YLDVELRVASL
Trigger: GAGAGATGCTACCCGGAGTTCCACATCCAGATACAAGCCTGGCACTGGCAGTTTCTCCAAGGATGCCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000473483.1
CDS CAA 72 bp GAACTGTCTTGCCATTCTTTGACATCTGGTTTTCCCTaGGCACCAGCAGCCTCCGAGGCCTCAGGGATCCCT +
Preference number: 6 (lower is better)
Translates to: ELSCHSLTSGFP*APAASEASGIP
Trigger: AGGGATCCCTGAGGCCTCGGAGGCTGCTGGTGCCAAGGGAAAACCAGATGTCAAAGAATGGCAAGACAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CAA 72 bp GCATCAACAGAACTGCCCCTTCCAGGACTTGAACCTTaGCTATCCAGGGACCATGGGCTTCGGCATCCACCA +
Preference number: 6 (lower is better)
Translates to: ASTELPLPGLEP*LSRDHGLRHPP
Trigger: TGGTGGATGCCGAAGCCCATGGTCCCTGGATAGCAAAGGTTCAAGTCCTGGAAGGGGCAGTTCTGTTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CAA 90 bp CTGTCTCTAGAAGACCCTGGAGTCCCAGAACTGTCTTGCCATTCTTaGACATCTGGTTTTCCCTTGGCACCAGCAGCCTCCGAGGCCTCA +
Preference number: 6 (lower is better)
Translates to: LSLEDPGVPELSCHS*TSGFPLAPAASEAS
Trigger: TGAGGCCTCGGAGGCTGCTGGTGCCAAGGGAAAACCAGATGTCAAAGAATGGCAAGACAGTTCTGGGACTCCAGGGTCTTCTAGAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS TCA 72 bp CCTGGTGTCATTCATGGGTGCTCCATCAGGACCACCTaGGCCATTTTTAAGACTGGCAACTCTCCCAGACCC +
Preference number: 6 (lower is better)
Translates to: PGVIHGCSIRTT*AIFKTGNSPRP
Trigger: GGGTCTGGGAGAGTTGCCAGTCTTAAAAATGGCTCAGGTGGTCCTGATGGAGCACCCATGAATGACACCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 72 bp ATCAGCTCCTTCCTGAGGTCTTCCTGCGGTTCCCTGTaGCTCTTCCGATTCTTCCGAAAGCCAACTTCGATG +
Preference number: 6 (lower is better)
Translates to: ISSFLRSSCGSL*LFRFFRKPTSM
Trigger: CATCGAAGTTGGCTTTCGGAAGAATCGGAAGAGGCACAGGGAACCGCAGGAAGACCTCAGGAAGGAGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS GCA 72 bp TCCTTCCTGTCTGCTGTCATCAGCAGCTGCCATATCTaGTCAAGGTCCATCTTTTTCTTGGGGGCTGGTGGG +
Preference number: 6 (lower is better)
Translates to: SFLSAVISSCHI*SRSIFFLGAGG
Trigger: CCCACCAGCCCCCAAGAAAAAGATGGACCTTGAGCAGATATGGCAGCTGCTGATGACAGCAGACAGGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS GCA 72 bp CCCCCAGCAGGAGCCCAGCACTGTGTTCATCTCAACTaGTTCTTCCTAAGCAGTCTGAGCAGAGTTAGTGGT +
Preference number: 6 (lower is better)
Translates to: PPAGAQHCVHLN*FFLSSLSRVSG
Trigger: ACCACTAACTCTGCTCAGACTGCTTAGGAAGAAGCAGTTGAGATGAACACAGTGCTGGGCTCCTGCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437879.6
ENST00000473483.1
CDS CCA 72 bp AGGCCCATGGTGGGCCCCAGTTTTTCTGAGGCTAGATaGTGTGTCATCCCAAGGACTTGTGCCCTTAGATTC +
Preference number: 6 (lower is better)
Translates to: RPMVGPSFSEAR*CVIPRTCALRF
Trigger: GAATCTAAGGGCACAAGTCCTTGGGATGACACACCATCTAGCCTCAGAAAAACTGGGGCCCACCATGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 72 bp GACCTTCCAAGCCATCCTTATAGCCTGTCTCACCTCTaGGTCCTTTTACTCTGGAGCTCCCTGACCCATTCC +
Preference number: 6 (lower is better)
Translates to: DLPSHPYSLSHL*VLLLWSSLTHS
Trigger: GGAATGGGTCAGGGAGCTCCAGAGTAAAAGGACCCAGAGGTGAGACAGGCTATAAGGATGGCTTGGAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CCA 72 bp TTCCTACAACCTGGCCCATCTGCTGATCCCATTCCTTaGAGGCCTCCTGAACCATCTCTAAAGCCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: FLQPGPSADPIP*RPPEPSLKPAS
Trigger: TGAGGCAGGCTTTAGAGATGGTTCAGGAGGCCTCCAAGGAATGGGATCAGCAGATGGGCCAGGTTGTAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CAA 72 bp TGGAAGGGGATCTTCACTATCACCGGCTTCCCAGCCTaGACCACCAGTGGCTCTCTCAGTTTCTCTGTCACA +
Preference number: 6 (lower is better)
Translates to: WKGIFTITGFPA*TTSGSLSFSVT
Trigger: TGTGACAGAGAAACTGAGAGAGCCACTGGTGGTCAAGGCTGGGAAGCCGGTGATAGTGAAGATCCCCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000473483.1
CDS CAA 72 bp ACAAGCCTGGTTTCCCTGGCTCGCTCTGGACCATCCTaGGAGTTCGTGTCACCCTCTGATGCTACCCAATAT +
Preference number: 6 (lower is better)
Translates to: TSLVSLARSGPS*EFVSPSDATQY
Trigger: ATATTGGGTAGCATCAGAGGGTGACACGAACTCCAAGGATGGTCCAGAGCGAGCCAGGGAAACCAGGCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CAA 90 bp TTGATCTGCAGCACGTGCTCCTTGCTGCCAGGGCTGGAGGAGATCTaGTACTTGCTGGAATCACTGAGGTCACCTTTGGAGTTCTGCCAA +
Preference number: 6 (lower is better)
Translates to: LICSTCSLLPGLEEI*YLLESLRSPLEFCQ
Trigger: TTGGCAGAACTCCAAAGGTGACCTCAGTGATTCCAGCAAGTACAAGATCTCCTCCAGCCCTGGCAGCAAGGAGCACGTGCTGCAGATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS CAA 90 bp CTGGAACTCATAGCGCTTCCCCAGCCGGCGCAGACAGTGCTTGGTTaGGTTGTTGAAGCCATAGGGGATCATCTCACCATCCTTATACAG +
Preference number: 6 (lower is better)
Translates to: LELIALPQPAQTVLG*VVEAIGDHLTILIQ
Trigger: CTGTATAAGGATGGTGAGATGATCCCCTATGGCTTCAACAACCAAACCAAGCACTGTCTGCGCCGGCTGGGGAAGCGCTATGAGTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS TCA 72 bp CTTCCGAAAGCCAACTTCGATGACAGTGAGTCTCACTaGGCAAGCGGCCTCTCCGTACGCATTTACTGCTGT +
Preference number: 6 (lower is better)
Translates to: LPKANFDDSESH*ASGLSVRIYCC
Trigger: ACAGCAGTAAATGCGTACGGAGAGGCCGCTTGCTCAGTGAGACTCACTGTCATCGAAGTTGGCTTTCGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS TCA 72 bp TCCCCAGCCGGCGCAGACAGTGCTTGGTTTGGTTGTTaGAGCCATAGGGGATCATCTCACCATCCTTATACA +
Preference number: 6 (lower is better)
Translates to: SPAGADSAWFGC*SHRGSSHHPYT
Trigger: TGTATAAGGATGGTGAGATGATCCCCTATGGCTTCAACAACCAAACCAAGCACTGTCTGCGCCGGCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS TCA 72 bp CTCCTGCTCTGCAGTTTGTGGTCAGCACTTGTGGACTaGAGGTCTTTATCCTTCCCAGCTTCAACCACCAGC +
Preference number: 6 (lower is better)
Translates to: LLLCSLWSALVD*RSLSFPASTTS
Trigger: GCTGGTGGTTGAAGCTGGGAAGGATAAAGACCTTCAGTCCACAAGTGCTGACCACAAACTGCAGAGCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295591.12
ENST00000437879.6
CDS GCA 72 bp ACATGCGTGATGAAGAGGCTGTGCACGAGACCGTCTTaGTTAAAGATGACTCCATCCTGGGTGGTGAGCTTG +
Preference number: 6 (lower is better)
Translates to: TCVMKRLCTRPS*LKMTPSWVVSL
Trigger: CAAGCTCACCACCCAGGATGGAGTCATCTTTAAGCAAGACGGTCTCGTGCACAGCCTCTTCATCACGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
ENST00000473483.1
CDS GCA 72 bp ACCCCAAGGCCTTATTCTTCCAGAGCTCTCTGGTTCTaGTTCCACACATCCCATCCCAACAGTCTCCACTAC +
Preference number: 6 (lower is better)
Translates to: TPRPYSSRALWF*FHTSHPNSLHY
Trigger: GTAGTGGAGACTGTTGGGATGGGATGTGTGGAAGCAGAACCAGAGAGCTCTGGAAGAATAAGGCCTTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CAA 72 bp GGCTGTCATCCTGTGAAATCTCTATCTGCTTTCCTCTaGGCCAGGACCCTACAGGATCAGACTGGCATCCCT +
Preference number: 6 (lower is better)
Translates to: GCHPVKSLSAFL*ARTLQDQTGIP
Trigger: AGGGATGCCAGTCTGATCCTGTAGGGTCCTGGCCAAGAGGAAAGCAGATAGAGATTTCACAGGATGACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CAA 90 bp CTCTGGAGCTCCCTGACCCATTCCAGAAATCTGGTTCAGACCCTATaGACCCAGGACCTCTTAATCCTTTCTTATCTCCTAGTGTCCCCC +
Preference number: 6 (lower is better)
Translates to: LWSSLTHSRNLVQTL*TQDLLILSYLLVSP
Trigger: GGGGGACACTAGGAGATAAGAAAGGATTAAGAGGTCCTGGGTCAATAGGGTCTGAACCAGATTTCTGGAATGGGTCAGGGAGCTCCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 72 bp ATTTTTAAGACTGGCAACTCTCCCAGACCCTCCTCCTaGAGGGCCAGAATCTTCATTTCCAGACCACACTCC +
Preference number: 6 (lower is better)
Translates to: IFKTGNSPRPSS*RARIFISRPHS
Trigger: GGAGTGTGGTCTGGAAATGAAGATTCTGGCCCTGCAGGAGGAGGGTCTGGGAGAGTTGCCAGTCTTAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS GCA 72 bp ATACTTCAAGCAGATCTTCTCGTAGTCCTTCCTGTCTaGTGTCATCAGCAGCTGCCATATCTGCTCAAGGTC +
Preference number: 6 (lower is better)
Translates to: ILQADLLVVLPV*CHQQLPYLLKV
Trigger: GACCTTGAGCAGATATGGCAGCTGCTGATGACAGCAGACAGGAAGGACTACGAGAAGATCTGCTTGAAGTAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS CAA 90 bp GAATCCTTGAGATCCAGCTCCAAGTCAAACTTTGCATTCCCATCCTaGGTGACCCTGATGTGTCTTAAGCTGGAGATGGTGTTGATGTAC +
Preference number: 6 (lower is better)
Translates to: ESLRSSSKSNFAFPS*VTLMCLKLEMVLMY
Trigger: GTACATCAACACCATCTCCAGCTTAAGACACATCAGGGTCACCAAGGATGGGAATGCAAAGTTTGACTTGGAGCTGGATCTCAAGGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6
CDS CAA 72 bp TTTCTACCACCTGATATTGATGGTTCCTGGAAGTCCTaGCCTCCAGGTATCTGTTCTAGCAACTCTCCTGAC +
Preference number: 6 (lower is better)
Translates to: FLPPDIDGSWKS*PPGICSSNSPD
Trigger: GTCAGGAGAGTTGCTAGAACAGATACCTGGAGGCAAGGACTTCCAGGAACCATCAATATCAGGTGGTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS CAA 72 bp TCCCTGACCCATTCCAGAAATCTGGTTCAGACCCTATaGACCCAGGACCTCTTAATCCTTTCTTATCTCCTA +
Preference number: 6 (lower is better)
Translates to: SLTHSRNLVQTL*TQDLLILSYLL
Trigger: TAGGAGATAAGAAAGGATTAAGAGGTCCTGGGTCAATAGGGTCTGAACCAGATTTCTGGAATGGGTCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335211.9
CDS TCA 72 bp CATCCTTATACAGGTAAATCTTGCTCTGAGAATCCTTaGGATCCAGCTCCAAGTCAAACTTTGCATTCCCAT +
Preference number: 6 (lower is better)
Translates to: HPYTGKSCSENP*DPAPSQTLHSH
Trigger: ATGGGAATGCAAAGTTTGACTTGGAGCTGGATCTCAAGGATTCTCAGAGCAAGATTTACCTGTATAAGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295591.12
ENST00000335211.9
ENST00000437879.6