RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGFBP5 (Homo sapiens)

Ensembl gene IDs: ENSG00000115461

Ensembl transcript IDs: ENST00000233813.5, ENST00000449583.1, ENST00000486341.1

Found 455 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATGGACTGAGGCGCGTGCTGTGTGCACCACGGAGGGCTGGCCTCTaGCTGGCTCGGTGGGTGCAGATGAACACACGTGGGGAATCACTG +
Preference number: 1 (lower is better)
Translates to: DGLRRVLCAPRRAGL*LARWVQMNTRGESL
Trigger: CAGTGATTCCCCACGTGTGTTCATCTGCACCCACCGAGCCAGGCAGAGGCCAGCCCTCCGTGGTGCACACAGCACGCGCCTCAGTCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 90 bp AAAATGGGATGGACTGAGGCGCGTGCTGTGTGCACCACGGAGGGCTaGCCTCTGCCTGGCTCGGTGGGTGCAGATGAACACACGTGGGGA +
Preference number: 1 (lower is better)
Translates to: KMGWTEARAVCTTEG*PLPGSVGADEHTWG
Trigger: TCCCCACGTGTGTTCATCTGCACCCACCGAGCCAGGCAGAGGCCAGCCCTCCGTGGTGCACACAGCACGCGCCTCAGTCCATCCCATTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 90 bp CCAGGTGGGTCAGGGCAGGCTGGAGGAAGGAGGGTCAGTCCTGGCTaGGCTTCCCTATCTCCTGGCAGTCGTGGGAAAGACAGAGGCATC +
Preference number: 1 (lower is better)
Translates to: PGGSGQAGGRRVSPG*ASLSPGSRGKDRGI
Trigger: GATGCCTCTGTCTTTCCCACGACTGCCAGGAGATAGGGAAGCCCAGCCAGGACTGACCCTCCTTCCTCCAGCCTGCCCTGACCCACCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 90 bp TTTGCCAGGTGGGTCAGGGCAGGCTGGAGGAAGGAGGGTCAGTCCTaGCTGGGCTTCCCTATCTCCTGGCAGTCGTGGGAAAGACAGAGG +
Preference number: 1 (lower is better)
Translates to: FARWVRAGWRKEGQS*LGFPISWQSWERQR
Trigger: CCTCTGTCTTTCCCACGACTGCCAGGAGATAGGGAAGCCCAGCCAGGACTGACCCTCCTTCCTCCAGCCTGCCCTGACCCACCTGGCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR TCA 90 bp GTGCACCACGGAGGGCTGGCCTCTGCCTGGCTCGGTGGGTGCAGATaGACACACGTGGGGAATCACTGTCAAATCCAGTACTGTGCCCCA +
Preference number: 1 (lower is better)
Translates to: VHHGGLASAWLGGCR*THVGNHCQIQYCAP
Trigger: TGGGGCACAGTACTGGATTTGACAGTGATTCCCCACGTGTGTTCATCTGCACCCACCGAGCCAGGCAGAGGCCAGCCCTCCGTGGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 90 bp CGCGTGCTGTGTGCACCACGGAGGGCTGGCCTCTGCCTGGCTCGGTaGGTGCAGATGAACACACGTGGGGAATCACTGTCAAATCCAGTA +
Preference number: 1 (lower is better)
Translates to: RVLCAPRRAGLCLAR*VQMNTRGESLSNPV
Trigger: TACTGGATTTGACAGTGATTCCCCACGTGTGTTCATCTGCACCCACCGAGCCAGGCAGAGGCCAGCCCTCCGTGGTGCACACAGCACGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 90 bp GGATGCAGGGACTGGCCAGAATGGAGGAAGAGCTGGAAAGACTCGTaGGCCTCAGTCCCTCATTGCAGGCTGAAGGTGGGCAGCGGAGCA +
Preference number: 1 (lower is better)
Translates to: GCRDWPEWRKSWKDS*ASVPHCRLKVGSGA
Trigger: TGCTCCGCTGCCCACCTTCAGCCTGCAATGAGGGACTGAGGCCCACGAGTCTTTCCAGCTCTTCCTCCATTCTGGCCAGTCCCTGCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR GCA 90 bp GAGGGTTTAAAGACTAAAATGGGATGGACTGAGGCGCGTGCTGTGTaGACCACGGAGGGCTGGCCTCTGCCTGGCTCGGTGGGTGCAGAT +
Preference number: 1 (lower is better)
Translates to: EGLKTKMGWTEARAV*TTEGWPLPGSVGAD
Trigger: ATCTGCACCCACCGAGCCAGGCAGAGGCCAGCCCTCCGTGGTGCACACAGCACGCGCCTCAGTCCATCCCATTTTAGTCTTTAAACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR GCA 90 bp AGATTGCCATACTCGCACCATTCCAAACCTGCCTCCCTCACACCCTaGCATGGGGGAAGAGGTGCCGTCTTCCTCCAGTGCCTCCCTTCC +
Preference number: 1 (lower is better)
Translates to: RLPYSHHSKPASLTP*HGGRGAVFLQCLPS
Trigger: GGAAGGGAGGCACTGGAGGAAGACGGCACCTCTTCCCCCATGGCAGGGTGTGAGGGAGGCAGGTTTGGAATGGTGCGAGTATGGCAATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR GCA 90 bp GCCCAGGTAAGAGGAGAGGAAGTTCAGGGGTCCAGCTGTCCATACTaGTGGCTAGAGGAGGAGACAGATCCGGGAGAGGTCCTGGAGTGT +
Preference number: 1 (lower is better)
Translates to: AQVRGEEVQGSSCPY*WLEEETDPGEVLEC
Trigger: ACACTCCAGGACCTCTCCCGGATCTGTCTCCTCCTCTAGCCAGCAGTATGGACAGCTGGACCCCTGAACTTCCTCTCCTCTTACCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR GCA 90 bp GGAATCTGGCTGCCGAGTGACAGCATCCCTGAATCATGCGTTCCCTaGTTGTCCCAGCTTTCCTTCCATCCTCCACCCCAGGGAGGATGC +
Preference number: 1 (lower is better)
Translates to: GIWLPSDSIPESCVP*LSQLSFHPPPQGGC
Trigger: GCATCCTCCCTGGGGTGGAGGATGGAAGGAAAGCTGGGACAAGCAGGGAACGCATGATTCAGGGATGCTGTCACTCGGCAGCCAGATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR GCA 90 bp GGCCCAGCTTCTCTGGGGAGTGACCAGCTGCCCAGGAGAAACTCCTaGATGCAGAAGAGACTCACAGGTTTGGGTTCGCAGGCACGAACT +
Preference number: 1 (lower is better)
Translates to: GPASLGSDQLPRRNS*MQKRLTGLGSQART
Trigger: AGTTCGTGCCTGCGAACCCAAACCTGTGAGTCTCTTCTGCATGCAGGAGTTTCTCCTGGGCAGCTGGTCACTCCCCAGAGAAGCTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 90 bp TGTGGGTGTGAGCATGGGAGTGGGCAGCACTTAGATTCGGAGCCATaGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGCAGACAGTCGGC +
Preference number: 1 (lower is better)
Translates to: CGCEHGSGQHLDSEP*IVRSPRSLGEQTVG
Trigger: GCCGACTGTCTGCTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTGCCCACTCCCATGCTCACACCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR TCA 90 bp GTCAAGGCCTTGTGGCTGCTGGCCCTATCGGGCCCCTTTGTCTCATaGAGATTGAGCACTTCTCCTGTCCCCAGCCAACTGTCCTGTCCA +
Preference number: 1 (lower is better)
Translates to: VKALWLLALSGPFVS*RLSTSPVPSQLSCP
Trigger: TGGACAGGACAGTTGGCTGGGGACAGGAGAAGTGCTCAATCTTCATGAGACAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR GCA 90 bp GAATGGAGGAAGAGCTGGAAAGACTCGTGGGCCTCAGTCCCTCATTaGAGGCTGAAGGTGGGCAGCGGAGCACATAGTCTTGTCCCTTCC +
Preference number: 1 (lower is better)
Translates to: EWRKSWKDSWASVPH*RLKVGSGAHSLVPS
Trigger: GGAAGGGACAAGACTATGTGCTCCGCTGCCCACCTTCAGCCTGCAATGAGGGACTGAGGCCCACGAGTCTTTCCAGCTCTTCCTCCATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 90 bp AATCCATCCTGGGAAACCCCAATAGTGTCATTGATTGCCACATCCTaGGCTGCATCTTCTAGCGCCCACCTCTCCCGACCCCAGGCCAGG +
Preference number: 1 (lower is better)
Translates to: NPSWETPIVSLIATS*AASSSAHLSRPQAR
Trigger: CCTGGCCTGGGGTCGGGAGAGGTGGGCGCTAGAAGATGCAGCCCAGGATGTGGCAATCAATGACACTATTGGGGTTTCCCAGGATGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 90 bp ATACAGAAACGTGAGTTGGGTTTAGGGGACAGCTGTGCAGAGAGATaGGGCATGCTGACTCGGCAGGTCAAGGCCTTGTGGCTGCTGGCC +
Preference number: 1 (lower is better)
Translates to: IQKRELGLGDSCAER*GMLTRQVKALWLLA
Trigger: GGCCAGCAGCCACAAGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCTCTGCACAGCTGTCCCCTAAACCCAACTCACGTTTCTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR TCA 90 bp CCAACGCAAGGGGCAGAAGCCTGCTCAAAGTCCAGACACAGTCCGTaGAGAGAGAGCCCCTCTCAAGAATTAGGTCCAGGCTGGGAGGAA +
Preference number: 1 (lower is better)
Translates to: PTQGAEACSKSRHSP*RESPSQELGPGWEE
Trigger: TTCCTCCCAGCCTGGACCTAATTCTTGAGAGGGGCTCTCTCTTCACGGACTGTGTCTGGACTTTGAGCAGGCTTCTGCCCCTTGCGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR TCA 90 bp CTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTaGGCAGACAGTCGGCCAAAGGCCAGCCTGGAGTCAAAGAGACCA +
Preference number: 1 (lower is better)
Translates to: LRFGAMDSPESKVSG*ADSRPKASLESKRP
Trigger: TGGTCTCTTTGACTCCAGGCTGGCCTTTGGCCGACTGTCTGCTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR GCA 90 bp CAGCTTCTCTGGGGAGTGACCAGCTGCCCAGGAGAAACTCCTGCATaGAGAAGAGACTCACAGGTTTGGGTTCGCAGGCACGAACTTTGG +
Preference number: 1 (lower is better)
Translates to: QLLWGVTSCPGETPA*RRDSQVWVRRHELW
Trigger: CCAAAGTTCGTGCCTGCGAACCCAAACCTGTGAGTCTCTTCTGCATGCAGGAGTTTCTCCTGGGCAGCTGGTCACTCCCCAGAGAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR GCA 90 bp GACAGTCGGCCAAAGGCCAGCCTGGAGTCAAAGAGACCAGACCCCTaGTTAGATTGCCATACTCGCACCATTCCAAACCTGCCTCCCTCA +
Preference number: 1 (lower is better)
Translates to: DSRPKASLESKRPDP*LDCHTRTIPNLPPS
Trigger: TGAGGGAGGCAGGTTTGGAATGGTGCGAGTATGGCAATCTAAGCAGGGGTCTGGTCTCTTTGACTCCAGGCTGGCCTTTGGCCGACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR TCA 90 bp AGCCCCAAATTCGTTGTTGGAGGCGGTCTCCGCTGTGTCATGCCATaGGCAAAGAGTGAAGAGAGCTGTGTCCACAGCACGAAGGGGTCT +
Preference number: 1 (lower is better)
Translates to: SPKFVVGGGLRCVMP*AKSEESCVHSTKGS
Trigger: AGACCCCTTCGTGCTGTGGACACAGCTCTCTTCACTCTTTGCTCATGGCATGACACAGCGGAGACCGCCTCCAACAACGAATTTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR GCA 90 bp TTCCATGTGTCCATGAAGGCCCAGCTTCTCTGGGGAGTGACCAGCTaGCCAGGAGAAACTCCTGCATGCAGAAGAGACTCACAGGTTTGG +
Preference number: 1 (lower is better)
Translates to: FHVSMKAQLLWGVTS*PGETPACRRDSQVW
Trigger: CCAAACCTGTGAGTCTCTTCTGCATGCAGGAGTTTCTCCTGGGCAGCTGGTCACTCCCCAGAGAAGCTGGGCCTTCATGGACACATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 90 bp CAGGTAAGAGGAGAGGAAGTTCAGGGGTCCAGCTGTCCATACTGCTaGCTAGAGGAGGAGACAGATCCGGGAGAGGTCCTGGAGTGTTTT +
Preference number: 1 (lower is better)
Translates to: QVRGEEVQGSSCPYC*LEEETDPGEVLECF
Trigger: AAAACACTCCAGGACCTCTCCCGGATCTGTCTCCTCCTCTAGCCAGCAGTATGGACAGCTGGACCCCTGAACTTCCTCTCCTCTTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 90 bp AGCTGCCCAGGAGAAACTCCTGCATGCAGAAGAGACTCACAGGTTTaGGTTCGCAGGCACGAACTTTGGAAACCGGAAGAGTCTGGCGCA +
Preference number: 1 (lower is better)
Translates to: SCPGETPACRRDSQV*VRRHELWKPEESGA
Trigger: TGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTGAGTCTCTTCTGCATGCAGGAGTTTCTCCTGGGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR GCA 90 bp TTCGTAGCCCCAAATTCGTTGTTGGAGGCGGTCTCCGCTGTGTCATaGCATGAGCAAAGAGTGAAGAGAGCTGTGTCCACAGCACGAAGG +
Preference number: 1 (lower is better)
Translates to: FVAPNSLLEAVSAVS*HEQRVKRAVSTARR
Trigger: CCTTCGTGCTGTGGACACAGCTCTCTTCACTCTTTGCTCATGGCATGACACAGCGGAGACCGCCTCCAACAACGAATTTGGGGCTACGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 90 bp ACAGCACGAAGGGGTCTCCTTGGCCAGTGTCCAAGCCCCCTTTCCTaGATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGG +
Preference number: 1 (lower is better)
Translates to: TARRGLLGQCPSPLS*ISSALKNSHKATHW
Trigger: CCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATATCCAGGAAAGGGGGCTTGGACACTGGCCAAGGAGACCCCTTCGTGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 90 bp GCATGCAGAAGAGACTCACAGGTTTGGGTTCGCAGGCACGAACTTTaGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCC +
Preference number: 1 (lower is better)
Translates to: ACRRDSQVWVRRHEL*KPEESGALTPGSNP
Trigger: GGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTGAGTCTCTTCTGCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR TCA 90 bp CATCGTGGACCTGTTGGGCTCATGTGGTGTGGTGTCCGGAGACTGTaGCTTCCTGAGGGTTTAAAGACTAAAATGGGATGGACTGAGGCG +
Preference number: 1 (lower is better)
Translates to: HRGPVGLMWCGVRRL*LPEGLKTKMGWTEA
Trigger: CGCCTCAGTCCATCCCATTTTAGTCTTTAAACCCTCAGGAAGTCACAGTCTCCGGACACCACACCACATGAGCCCAACAGGTCCACGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 90 bp GCAAAGAGTGAAGAGAGCTGTGTCCACAGCACGAAGGGGTCTCCTTaGCCAGTGTCCAAGCCCCCTTTCCTGGATATCTTCAGCCTTAAA +
Preference number: 1 (lower is better)
Translates to: AKSEESCVHSTKGSP*PVSKPPFLDIFSLK
Trigger: TTTAAGGCTGAAGATATCCAGGAAAGGGGGCTTGGACACTGGCCAAGGAGACCCCTTCGTGCTGTGGACACAGCTCTCTTCACTCTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 90 bp TCCCTCGTCCCTCCTCCACTTTGCAAAACGGAGCCTCCTTTCTCTTaGAAGCCAGACATATCCTCTCTGACGCTATGGGGTTTCTTCTCC +
Preference number: 1 (lower is better)
Translates to: SLVPPPLCKTEPPFS*KPDISSLTLWGFFS
Trigger: GGAGAAGAAACCCCATAGCGTCAGAGAGGATATGTCTGGCTTCCAAGAGAAAGGAGGCTCCGTTTTGCAAAGTGGAGGAGGGACGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR TCA 90 bp GACGTGGAAGAGGTTTGGGATACTGGCCTAAGACATACAGAAACGTaGGTTGGGTTTAGGGGACAGCTGTGCAGAGAGATGGGGCATGCT +
Preference number: 1 (lower is better)
Translates to: DVEEVWDTGLRHTET*VGFRGQLCREMGHA
Trigger: AGCATGCCCCATCTCTCTGCACAGCTGTCCCCTAAACCCAACTCACGTTTCTGTATGTCTTAGGCCAGTATCCCAAACCTCTTCCACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 90 bp ACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGTTTCGGAATCTaGCTGCCGAGTGACAGCATCCCTGAATCATGCGTTCCCTGCTTG +
Preference number: 1 (lower is better)
Translates to: THWLRKSLENGSFGI*LPSDSIPESCVPCL
Trigger: CAAGCAGGGAACGCATGATTCAGGGATGCTGTCACTCGGCAGCCAGATTCCGAAACTCCCATTCTCCAATGACTTCCTCAACCAATGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR GCA 90 bp GGCCGGAACCATCCATCTTACTGTTCTCCTGCATCTAAACCTTTTTaGCACCATCTCCCTCTGCCATCTCTTACTTCAGTCTCCCTCCTG +
Preference number: 1 (lower is better)
Translates to: GRNHPSYCSPASKPF*HHLPLPSLTSVSLL
Trigger: CAGGAGGGAGACTGAAGTAAGAGATGGCAGAGGGAGATGGTGGCAAAAAGGTTTAGATGCAGGAGAACAGTAAGATGGATGGTTCCGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 90 bp TTCTCAGGGGAGTGGCACCCCAGTATCCACTTGGCAGATCCTAGTTaGATAACTGCTCAAGATGCAAAGGGAGAATGGGTGGAAAGAACA +
Preference number: 1 (lower is better)
Translates to: FSGEWHPSIHLADPS*ITAQDAKGEWVERT
Trigger: TGTTCTTTCCACCCATTCTCCCTTTGCATCTTGAGCAGTTATCCAACTAGGATCTGCCAAGTGGATACTGGGGTGCCACTCCCCTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 90 bp GAGCCTCCTTTCTCTTGGAAGCCAGACATATCCTCTCTGACGCTATaGGGTTTCTTCTCCTTAGAGCTCTTCTCTGAGGTTCCCATTCTG +
Preference number: 1 (lower is better)
Translates to: EPPFSWKPDISSLTL*GFFSLELFSEVPIL
Trigger: CAGAATGGGAACCTCAGAGAAGAGCTCTAAGGAGAAGAAACCCCATAGCGTCAGAGAGGATATGTCTGGCTTCCAAGAGAAAGGAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 90 bp TTGGCAGATCCTAGTTGGATAACTGCTCAAGATGCAAAGGGAGAATaGGTGGAAAGAACAGTGACGTGGAAGAGGTTTGGGATACTGGCC +
Preference number: 1 (lower is better)
Translates to: LADPSWITAQDAKGE*VERTVTWKRFGILA
Trigger: GGCCAGTATCCCAAACCTCTTCCACGTCACTGTTCTTTCCACCCATTCTCCCTTTGCATCTTGAGCAGTTATCCAACTAGGATCTGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 90 bp TCCTGGATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTaGTTGAGGAAGTCATTGGAGAATGGGAGTTTCGGAATCTGGCTG +
Preference number: 1 (lower is better)
Translates to: SWISSALKNSHKATH*LRKSLENGSFGIWL
Trigger: CAGCCAGATTCCGAAACTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATATCCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 90 bp TTGTCCCTTCCAAAGCATGGCCAGTTTAGACTGATTCTTCCTATCTaGCTTCTAAAGTCTAGCACCCTCCTAAAGTTACTCACCTTCCCT +
Preference number: 1 (lower is better)
Translates to: LSLPKHGQFRLILPI*LLKSSTLLKLLTFP
Trigger: AGGGAAGGTGAGTAACTTTAGGAGGGTGCTAGACTTTAGAAGCCAGATAGGAAGAATCAGTCTAAACTGGCCATGCTTTGGAAGGGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp TGTGCAGAGAGATGGGGCATGCTGACTCGGCAGGTCAAGGCCTTGTGGCTGCTGGAGGCGCGTGCTGTGTaGACCACGGAGGGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: CAERWGMLTRQVKALWLLEARAV*TTEGWP
Trigger: AGGCCAGCCCTCCGTGGTGCACACAGCACGCGCCTC...CAGCAGCCACAAGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCTCTGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTTGCACCACGGAGGGCTaGCCTCTGCCTGGCTCGGTG +
Preference number: 2 (lower is better)
Translates to: LWKPEESGALTPGSNPPPCTTEG*PLPGSV
Trigger: CACCGAGCCAGGCAGAGGCCAGCCCTCCGTGGTGCA...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR TCA 90 bp AAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAGAGATGGGGCATGCTaGCTCGGCAGGTCAAGGCCT +
Preference number: 2 (lower is better)
Translates to: KSLAHLHQALIPHLMAGSRDGAC*LGRSRP
Trigger: AGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCT...GCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp CACAGGTTTGGGTTCGCAGGCACGAACTTTGGAAACCGGAAGAGTCTGGCGCACAGGCCTTGTGGCTGCTaGCCCTATCGGGCCCCTTTG +
Preference number: 2 (lower is better)
Translates to: HRFGFAGTNFGNRKSLAHRPCGC*PYRAPL
Trigger: CAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCT...GTGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 90 bp CCCTTCCCAGGATCTCCCCACCCTGGGCTCAGCCAGAACTCCCATTaGGGAGGCTTAGTTCCATGTGTCCATGAAGGCCCAGCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: PFPGSPHPGLSQNSH*GGLVPCVHEGPASL
Trigger: CAGAGAAGCTGGGCCTTCATGGACACATGGAACTAAGCCTCCCAAATGGGAGTTCTGGCTGAGCCCAGGGTGGGGAGATCCTGGGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 90 bp CTGTCAAAGAAAGGTTCCAGTCTCTTCCTCCCCATGTGCCCTGCTTaGCCAGGTGGGTCAGGGCAGGCTGGAGGAAGGAGGGTCAGTCCT +
Preference number: 2 (lower is better)
Translates to: LSKKGSSLFLPMCPA*PGGSGQAGGRRVSP
Trigger: AGGACTGACCCTCCTTCCTCCAGCCTGCCCTGACCCACCTGGCAAAGCAGGGCACATGGGGAGGAAGAGACTGGAACCTTTCTTTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR TCA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTTCCCTCATTGCAGGCTaGAGGTGGGCAGCGGAGCAC +
Preference number: 2 (lower is better)
Translates to: LWKPEESGALTPGSNPPPSLIAG*RWAAEH
Trigger: GTGCTCCGCTGCCCACCTTCAGCCTGCAATGAGGGA...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp AGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAAAAGTTGGGCCCCTGCCTaGTCTCGGTGCATGTCCTTC +
Preference number: 2 (lower is better)
Translates to: SLAHLHQALIPHLMAGSKSWAPA*SRCMSF
Trigger: GAAGGACATGCACCGAGACCAGGCAGGGGCCCAACT...TTTGCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp GGCAGGTCAAGGCCTTGTGGCTGCTGGCCCTATCGGGCCCCTTTGTCTCATGAAGGGAGTTTCGGAATCTaGCTGCCGAGTGACAGCATC +
Preference number: 2 (lower is better)
Translates to: GRSRPCGCWPYRAPLSHEGSFGI*LPSDSI
Trigger: GATGCTGTCACTCGGCAGCCAGATTCCGAAACTCCC...TTCATGAGACAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGACCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 90 bp AAAGGAAAAGGCTGGGGTGGGACTGGTGGATCCATCGTGGACCTGTaGGGCTCATGTGGTGTGGTGTCCGGAGACTGTGACTTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: KGKGWGGTGGSIVDL*GSCGVVSGDCDFLR
Trigger: CCTCAGGAAGTCACAGTCTCCGGACACCACACCACATGAGCCCAACAGGTCCACGATGGATCCACCAGTCCCACCCCAGCCTTTTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR TCA 90 bp TGTGCAGAGAGATGGGGCATGCTGACTCGGCAGGTCAAGGCCTTGTGGCTGCTGGGTGTCCGGAGACTGTaGCTTCCTGAGGGTTTAAAG +
Preference number: 2 (lower is better)
Translates to: CAERWGMLTRQVKALWLLGVRRL*LPEGLK
Trigger: CTTTAAACCCTCAGGAAGTCACAGTCTCCGGACACC...CAGCAGCCACAAGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCTCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp AGACCCCTGCTTAGATTGCCATACTCGCACCATTCCAAACCTGCCTCCCTCACATCAAGGCCTTGTGGCTaGTGGCCCTATCGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: RPLLRLPYSHHSKPASLTSRPCG*WPYRAP
Trigger: AGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGA...TGTGAGGGAGGCAGGTTTGGAATGGTGCGAGTATGGCAATCTAAGCAGGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGCCATGGGGGAAGAGGTaGCGTCTTCCTCCAGTGCCT +
Preference number: 2 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGEPWGKR*RLPPVP
Trigger: AGGCACTGGAGGAAGACGGCACCTCTTCCCCCATGG...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp AGACCCCTGCTTAGATTGCCATACTCGCACCATTCCAAACCTGCCTCCCTCACAGCTGGACGTGAAAGTTaGGCCCCTGCCTGGTCTCGG +
Preference number: 2 (lower is better)
Translates to: RPLLRLPYSHHSKPASLTAGRES*APAWSR
Trigger: CCGAGACCAGGCAGGGGCCCAACTTTCACGTCCAGC...TGTGAGGGAGGCAGGTTTGGAATGGTGCGAGTATGGCAATCTAAGCAGGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp CACAGGTTTGGGTTCGCAGGCACGAACTTTGGAAACCGGAAGAGTCTGGCGCACCTGGGGTGGGACTGGTaGATCCATCGTGGACCTGTT +
Preference number: 2 (lower is better)
Translates to: HRFGFAGTNFGNRKSLAHLGWDW*IHRGPV
Trigger: AACAGGTCCACGATGGATCCACCAGTCCCACCCCAG...GTGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp TGTGCAGAGAGATGGGGCATGCTGACTCGGCAGGTCAAGGCCTTGTGGCTGCTGAGGGACTGGCCAGAATaGAGGAAGAGCTGGAAAGAC +
Preference number: 2 (lower is better)
Translates to: CAERWGMLTRQVKALWLLRDWPE*RKSWKD
Trigger: GTCTTTCCAGCTCTTCCTCCATTCTGGCCAGTCCCT...CAGCAGCCACAAGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCTCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGCCTCACACCCTGCCATaGGGGAAGAGGTGCCGTCTT +
Preference number: 2 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGEPHTLP*GKRCRL
Trigger: AAGACGGCACCTCTTCCCCCATGGCAGGGTGTGAGG...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 90 bp CAGCTGCCCAGGAGAAACTCCTGCATGCAGAAGAGACTCACAGGTTaGGGTTCGCAGGCACGAACTTTGGAAACCGGAAGAGTCTGGCGC +
Preference number: 2 (lower is better)
Translates to: QLPRRNSCMQKRLTG*GSQARTLETGRVWR
Trigger: GCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTGAGTCTCTTCTGCATGCAGGAGTTTCTCCTGGGCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR TCA 90 bp AAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCGGGTGGAAAGAACAGTaGCGTGGAAGAGGTTTGGGA +
Preference number: 2 (lower is better)
Translates to: KSLAHLHQALIPHLMAGSGWKEQ*RGRGLG
Trigger: TCCCAAACCTCTTCCACGTCACTGTTCTTTCCACCC...GCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR TCA 90 bp CACAGGTTTGGGTTCGCAGGCACGAACTTTGGAAACCGGAAGAGTCTGGCGCACTCCAGACACAGTCCGTaGAGAGAGAGCCCCTCTCAA +
Preference number: 2 (lower is better)
Translates to: HRFGFAGTNFGNRKSLAHSRHSP*RESPSQ
Trigger: TTGAGAGGGGCTCTCTCTTCACGGACTGTGTCTGGA...GTGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp AAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCTTTAGGGGACAGCTGTaGAGAGAGATGGGGCATGCT +
Preference number: 2 (lower is better)
Translates to: KSLAHLHQALIPHLMAGSFRGQL*REMGHA
Trigger: AGCATGCCCCATCTCTCTGCACAGCTGTCCCCTAAA...GCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp AGGGACTGGCCAGAATGGAGGAAGAGCTGGAAAGACTCGTGGGCCTCAGTCCCTTCCCCACATCGACTCTaGCCGGAACCATCCATCTTA +
Preference number: 2 (lower is better)
Translates to: RDWPEWRKSWKDSWASVPSPHRL*PEPSIL
Trigger: TAAGATGGATGGTTCCGGCCAGAGTCGATGTGGGGA...AGGGACTGAGGCCCACGAGTCTTTCCAGCTCTTCCTCCATTCTGGCCAGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGGGAGGATGCAGGGACTaGCCAGAATGGAGGAAGAGC +
Preference number: 2 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGEGGCRD*PEWRKS
Trigger: GCTCTTCCTCCATTCTGGCCAGTCCCTGCATCCTCC...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 90 bp AGGTTGCTGGCTGGTGAAACCCCTGTCCCTCGTCCCTCCTCCACTTaGCAAAACGGAGCCTCCTTTCTCTTGGAAGCCAGACATATCCTC +
Preference number: 2 (lower is better)
Translates to: RLLAGETPVPRPSST*QNGASFLLEARHIL
Trigger: GAGGATATGTCTGGCTTCCAAGAGAAAGGAGGCTCCGTTTTGCAAAGTGGAGGAGGGACGAGGGACAGGGGTTTCACCAGCCAGCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR TCA 90 bp GGCAGGTCAAGGCCTTGTGGCTGCTGGCCCTATCGGGCCCCTTTGTCTCATGAATTAAATGAGATGAAATaGGTGGCGTCCTGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: GRSRPCGCWPYRAPLSHELNEMK*VASWGG
Trigger: TCCACCCCAGGACGCCACTCATTTCATCTCATTTAA...TTCATGAGACAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGACCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR TCA 90 bp GGCAGGTCAAGGCCTTGTGGCTGCTGGCCCTATCGGGCCCCTTTGTCTCATGAATGCCATTTTCGAAGTTaGGCCCTTGCTAGAGATTCC +
Preference number: 2 (lower is better)
Translates to: GRSRPCGCWPYRAPLSHECHFRS*ALARDS
Trigger: GGAATCTCTAGCAAGGGCTCAACTTCGAAAATGGCA...TTCATGAGACAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGACCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTCTTCAGTCTCCCTCCTaGTCTGCCAGCATGGAGAGT +
Preference number: 2 (lower is better)
Translates to: LWKPEESGALTPGSNPPPLQSPS*SASMES
Trigger: ACTCTCCATGCTGGCAGAGCAGGAGGGAGACTGAAG...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp GGCAGGTCAAGGCCTTGTGGCTGCTGGCCCTATCGGGCCCCTTTGTCTCATGAAGCTTTTCCCCCTTTCTaGTGCTTTGTGCCAAAGCTA +
Preference number: 2 (lower is better)
Translates to: GRSRPCGCWPYRAPLSHEAFPPF*CFVPKL
Trigger: TAGCTTTGGCACAAAGCAGCAGAAAGGGGGAAAAGC...TTCATGAGACAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGACCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp CTCACTGGTGGAGTGAGGCACGAATCTAAAGGGGATGGGAAGACCTTCTGTGGGCTGGTGGATCCATCGTaGACCTGTTGGGCTCATGTG +
Preference number: 2 (lower is better)
Translates to: LTGGVRHESKGDGKTFCGLVDPS*TCWAHV
Trigger: CACATGAGCCCAACAGGTCCACGATGGATCCACCAG...CCCACAGAAGGTCTTCCCATCCCCTTTAGATTCGTGCCTCACTCCACCAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp TGTTCCTCCCCACATCGACTCTGGCCGGAACCATCCATCTTACTGTTCTCCTGCAGGAAAAGGCTGGGGTaGGACTGGTGGATCCATCGT +
Preference number: 2 (lower is better)
Translates to: CSSPHRLWPEPSILLFSCRKRLG*DWWIHR
Trigger: ACGATGGATCCACCAGTCCCACCCCAGCCTTTTCCT...GCAGGAGAACAGTAAGATGGATGGTTCCGGCCAGAGTCGATGTGGGGAGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp GGCAGGTCAAGGCCTTGTGGCTGCTGGCCCTATCGGGCCCCTTTGTCTCATGAACCAAGCCCCCTTTCCTaGATATCTTCAGCCTTAAAG +
Preference number: 2 (lower is better)
Translates to: GRSRPCGCWPYRAPLSHEPSPLS*ISSALK
Trigger: CTTTAAGGCTGAAGATATCCAGGAAAGGGGGCTTGG...TTCATGAGACAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGACCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGCGCAGGCACGAACTTTaGAAACCGGAAGAGTCTGGC +
Preference number: 2 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGERRHEL*KPEESG
Trigger: GCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCG...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 90 bp TTTCTCCCCCTGACCAATCCATCCTGGGAAACCCCAATAGTGTCATaGATTGCCACATCCTGGGCTGCATCTTCTAGCGCCCACCTCTCC +
Preference number: 2 (lower is better)
Translates to: FLPLTNPSWETPIVS*IATSWAASSSAHLS
Trigger: GGAGAGGTGGGCGCTAGAAGATGCAGCCCAGGATGTGGCAATCAATGACACTATTGGGGTTTCCCAGGATGGATTGGTCAGGGGGAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR TCA 90 bp ATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCAGGCCAGGGCTGGACGTaGAAGTTGGGCCCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: ISSALKNSHKATHWLRKSGQGWT*KLGPCL
Trigger: CAGGCAGGGGCCCAACTTTCACGTCCAGCCCTGGCC...TGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp AAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGCCTGCCTGGTCTCGGTaGATGTCCTTCCTGCCCACC +
Preference number: 2 (lower is better)
Translates to: KEQSQGHPLVEEVIGEWEPAWSR*MSFLPT
Trigger: GGTGGGCAGGAAGGACATGCACCGAGACCAGGCAGG...CTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp CACAGGTTTGGGTTCGCAGGCACGAACTTTGGAAACCGGAAGAGTCTGGCGCACAAGACTAAAATGGGATaGACTGAGGCGCGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: HRFGFAGTNFGNRKSLAHKTKMG*TEARAV
Trigger: CACAGCACGCGCCTCAGTCCATCCCATTTTAGTCTT...GTGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp AGACCCCTGCTTAGATTGCCATACTCGCACCATTCCAAACCTGCCTCCCTCACACCATCGTGGACCTGTTaGGCTCATGTGGTGTGGTGT +
Preference number: 2 (lower is better)
Translates to: RPLLRLPYSHHSKPASLTPSWTC*AHVVWC
Trigger: ACACCACACCACATGAGCCCAACAGGTCCACGATGG...TGTGAGGGAGGCAGGTTTGGAATGGTGCGAGTATGGCAATCTAAGCAGGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGCAGGTCAAGGCCTTGTaGCTGCTGGCCCTATCGGGC +
Preference number: 2 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVQVKAL*LLALSG
Trigger: GCCCGATAGGGCCAGCAGCCACAAGGCCTTGACCTG...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR TCA 90 bp AGACCCCTGCTTAGATTGCCATACTCGCACCATTCCAAACCTGCCTCCCTCACACGCTGTGTCATGCCATaGGCAAAGAGTGAAGAGAGC +
Preference number: 2 (lower is better)
Translates to: RPLLRLPYSHHSKPASLTRCVMP*AKSEES
Trigger: GCTCTCTTCACTCTTTGCTCATGGCATGACACAGCG...TGTGAGGGAGGCAGGTTTGGAATGGTGCGAGTATGGCAATCTAAGCAGGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR TCA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGGGCCCCTTTGTCTCATaGAGATTGAGCACTTCTCCT +
Preference number: 2 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGEGPFVS*RLSTSP
Trigger: AGGAGAAGTGCTCAATCTTCATGAGACAAAGGGGCC...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR TCA 90 bp CACTTTAGTGGTTTTAAAAACACAGACAGTACAAGGCCCAGGTTGCTGGCTGGTGAGCCCTCTCAGGAGTaGGTGGATGGGTCCGGGGTA +
Preference number: 2 (lower is better)
Translates to: HFSGFKNTDSTRPRLLAGEPSQE*VDGSGV
Trigger: TACCCCGGACCCATCCACTCACTCCTGAGAGGGCTC...ACCAGCCAGCAACCTGGGCCTTGTACTGTCTGTGTTTTTAAAACCACTAAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp CACAGGTTTGGGTTCGCAGGCACGAACTTTGGAAACCGGAAGAGTCTGGCGCACCCCCACAGAGGCTGCTaGGCTACTTACAAATTGAAT +
Preference number: 2 (lower is better)
Translates to: HRFGFAGTNFGNRKSLAHPHRGC*ATYKLN
Trigger: ATTCAATTTGTAAGTAGCGCAGCAGCCTCTGTGGGG...GTGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp CTCACTGGTGGAGTGAGGCACGAATCTAAAGGGGATGGGAAGACCTTCTGTGGGGCCACCATCTCCCTCTaGCATCTCTTACTTCAGTCT +
Preference number: 2 (lower is better)
Translates to: LTGGVRHESKGDGKTFCGATISL*HLLLQS
Trigger: AGACTGAAGTAAGAGATGGCAGAGGGAGATGGTGGC...CCCACAGAAGGTCTTCCCATCCCCTTTAGATTCGTGCCTCACTCCACCAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp CTCACTGGTGGAGTGAGGCACGAATCTAAAGGGGATGGGAAGACCTTCTGTGGGCCCAGGAGAAACTCCTaGATGCAGAAGAGACTCACA +
Preference number: 2 (lower is better)
Translates to: LTGGVRHESKGDGKTFCGPRRNS*MQKRLT
Trigger: TGTGAGTCTCTTCTGCATGCAGGAGTTTCTCCTGGG...CCCACAGAAGGTCTTCCCATCCCCTTTAGATTCGTGCCTCACTCCACCAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp CACTTTAGTGGTTTTAAAAACACAGACAGTACAAGGCCCAGGTTGCTGGCTGGTCCTCCCCATGTGCCCTaGTTTGCCAGGTGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: HFSGFKNTDSTRPRLLAGPPHVP*FARWVR
Trigger: CCTGACCCACCTGGCAAAGCAGGGCACATGGGGAGG...ACCAGCCAGCAACCTGGGCCTTGTACTGTCTGTGTTTTTAAAACCACTAAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGATCCGGGAGAGGTCCTaGAGTGTTTTGCCTTTTCCT +
Preference number: 2 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGEIRERS*SVLPFP
Trigger: AGGAAAAGGCAAAACACTCCAGGACCTCTCCCGGAT...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp AGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAAAGACGTGGAAGAGGTTTaGGATACTGGCCTAAGACAT +
Preference number: 2 (lower is better)
Translates to: SLAHLHQALIPHLMAGSKDVEEV*DTGLRH
Trigger: ATGTCTTAGGCCAGTATCCCAAACCTCTTCCACGTC...TTTGCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp AGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAAATTTCCCCCTTTCTGCTaGTTTGTGCCAAAGCTAGAA +
Preference number: 2 (lower is better)
Translates to: SLAHLHQALIPHLMAGSKFPPFC*FVPKLE
Trigger: TTCTAGCTTTGGCACAAAGCAGCAGAAAGGGGGAAA...TTTGCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp GATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCGCCTCAGTCCCTCATTaGAGGCTGAAGGTGGGCAGC +
Preference number: 2 (lower is better)
Translates to: DIFSLKEQSQGHPLVEEVASVPH*RLKVGS
Trigger: GCTGCCCACCTTCAGCCTGCAATGAGGGACTGAGGC...GACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp CTCACTGGTGGAGTGAGGCACGAATCTAAAGGGGATGGGAAGACCTTCTGTGGGGGAGAAACTCCTGCATaGAGAAGAGACTCACAGGTT +
Preference number: 2 (lower is better)
Translates to: LTGGVRHESKGDGKTFCGGETPA*RRDSQV
Trigger: AACCTGTGAGTCTCTTCTGCATGCAGGAGTTTCTCC...CCCACAGAAGGTCTTCCCATCCCCTTTAGATTCGTGCCTCACTCCACCAGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp CTGCATCTAAACCTTTTTGCCACCATCTCCCTCTGCCATCTCTTACTTCAGTCTAGGCTGGGGTGGGACTaGTGGATCCATCGTGGACCT +
Preference number: 2 (lower is better)
Translates to: LHLNLFATISLCHLLLQSRLGWD*WIHRGP
Trigger: AGGTCCACGATGGATCCACCAGTCCCACCCCAGCCT...AGACTGAAGTAAGAGATGGCAGAGGGAGATGGTGGCAAAAAGGTTTAGATGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp CAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGTTTCGGGAATGGAGGAAGAGCTaGAAAGACTCGTGGGCCTCA +
Preference number: 2 (lower is better)
Translates to: QSQGHPLVEEVIGEWEFREWRKS*KDSWAS
Trigger: TGAGGCCCACGAGTCTTTCCAGCTCTTCCTCCATTC...CCGAAACTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGCAAAGGGAGAATaGGTGGAAAGAACAGTGACG +
Preference number: 2 (lower is better)
Translates to: LWKPEESGALTPGSNPPPDAKGE*VERTVT
Trigger: CGTCACTGTTCTTTCCACCCATTCTCCCTTTGCATC...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 90 bp GCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATaGGAGAATGGGAGTTTCGGAATCTGGCTGCCGAGTGACAGCATC +
Preference number: 2 (lower is better)
Translates to: ALKNSHKATHWLRKS*ENGSFGIWLPSDSI
Trigger: GATGCTGTCACTCGGCAGCCAGATTCCGAAACTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR TCA 90 bp CAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGTTTCGGTCAGTTTTCCCAGAATaGGGAAGCTCCTCAATGCCC +
Preference number: 2 (lower is better)
Translates to: QSQGHPLVEEVIGEWEFRSVFPE*GSSSMP
Trigger: GGGCATTGAGGAGCTTCCTCATTCTGGGAAAACTGA...CCGAAACTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR TCA 90 bp GATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCCTCGGTGGGTGCAGATaGACACACGTGGGGAATCAC +
Preference number: 2 (lower is better)
Translates to: DIFSLKEQSQGHPLVEEVLGGCR*THVGNH
Trigger: GTGATTCCCCACGTGTGTTCATCTGCACCCACCGAG...GACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp CTCACTGGTGGAGTGAGGCACGAATCTAAAGGGGATGGGAAGACCTTCTGTGGGAATAGTGTCATTGATTaGCACATCCTGGGCTGCATC +
Preference number: 2 (lower is better)
Translates to: LTGGVRHESKGDGKTFCGNSVID*HILGCI
Trigger: GATGCAGCCCAGGATGTGGCAATCAATGACACTATT...CCCACAGAAGGTCTTCCCATCCCCTTTAGATTCGTGCCTCACTCCACCAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp GATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCCTCTGCCTGGCTCGGTaGGTGCAGATGAACACACGT +
Preference number: 2 (lower is better)
Translates to: DIFSLKEQSQGHPLVEEVLCLAR*VQMNTR
Trigger: ACGTGTGTTCATCTGCACCCACCGAGCCAGGCAGAG...GACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR TCA 90 bp CTCACTGGTGGAGTGAGGCACGAATCTAAAGGGGATGGGAAGACCTTCTGTGGGTGTCTGCCTGGGGAATaGAATATGCACATGTATTTC +
Preference number: 2 (lower is better)
Translates to: LTGGVRHESKGDGKTFCGCLPGE*NMHMYF
Trigger: GAAATACATGTGCATATTTCATTCCCCAGGCAGACA...CCCACAGAAGGTCTTCCCATCCCCTTTAGATTCGTGCCTCACTCCACCAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGCTCCCCCACAGAGGCTaGTGCGCTACTTACAAATTG +
Preference number: 2 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVLPHRG*CATYKL
Trigger: CAATTTGTAAGTAGCGCAGCAGCCTCTGTGGGGGAG...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp GATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCTGGGCTCATGTGGTGTaGTGTCCGGAGACTGTGACT +
Preference number: 2 (lower is better)
Translates to: DIFSLKEQSQGHPLVEEVWAHVV*CPETVT
Trigger: AGTCACAGTCTCCGGACACCACACCACATGAGCCCA...GACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGGTGCCAAAGCTAGAATaGAACAGTCAGCCCCCTCTC +
Preference number: 2 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVVPKLE*NSQPPL
Trigger: GAGAGGGGGCTGACTGTTCCATTCTAGCTTTGGCAC...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGAGAGGTTTGGGATACTaGCCTAAGACATACAGAAAC +
Preference number: 2 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGERGLGY*PKTYRN
Trigger: GTTTCTGTATGTCTTAGGCCAGTATCCCAAACCTCT...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp AGACCCCTGCTTAGATTGCCATACTCGCACCATTCCAAACCTGCCTCCCTCACAGAAAGAACAGTGACGTaGAAGAGGTTTGGGATACTG +
Preference number: 2 (lower is better)
Translates to: RPLLRLPYSHHSKPASLTERTVT*KRFGIL
Trigger: CAGTATCCCAAACCTCTTCCACGTCACTGTTCTTTC...TGTGAGGGAGGCAGGTTTGGAATGGTGCGAGTATGGCAATCTAAGCAGGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 90 bp TGGATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTaGAGGAAGTCATTGGAGAATGGGAGTTTCGGAATCTGGCTGCCG +
Preference number: 2 (lower is better)
Translates to: WISSALKNSHKATHW*RKSLENGSFGIWLP
Trigger: CGGCAGCCAGATTCCGAAACTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 90 bp AGATTTGCTTTTTCGCTATTCCTCTTCGTAGCCCCAAATTCGTTGTaGGAGGCGGTCTCCGCTGTGTCATGCCATGAGCAAAGAGTGAAG +
Preference number: 2 (lower is better)
Translates to: RFAFSLFLFVAPNSL*EAVSAVSCHEQRVK
Trigger: CTTCACTCTTTGCTCATGGCATGACACAGCGGAGACCGCCTCCAACAACGAATTTGGGGCTACGAAGAGGAATAGCGAAAAAGCAAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 90 bp CAACAACGAAAACAACCGGTAGGCAACTCGGAATCTGAAGGAATCTaGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGACAGTG +
Preference number: 2 (lower is better)
Translates to: QQRKQPVGNSESEGI*SDNCAIHVGYGVTV
Trigger: CACTGTCACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTCCGAGTTGCCTACCGGTTGTTTTCGTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp CACTTTAGTGGTTTTAAAAACACAGACAGTACAAGGCCCAGGTTGCTGGCTGGTTCCAGCTGTCCATACTaGTGGCTAGAGGAGGAGACA +
Preference number: 2 (lower is better)
Translates to: HFSGFKNTDSTRPRLLAGSSCPY*WLEEET
Trigger: TGTCTCCTCCTCTAGCCAGCAGTATGGACAGCTGGA...ACCAGCCAGCAACCTGGGCCTTGTACTGTCTGTGTTTTTAAAACCACTAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp CACTTTAGTGGTTTTAAAAACACAGACAGTACAAGGCCCAGGTTGCTGGCTGGTAGCATCCCTGAATCATaGGTTCCCTGCTTGTCCCAG +
Preference number: 2 (lower is better)
Translates to: HFSGFKNTDSTRPRLLAGSIPES*VPCLSQ
Trigger: CTGGGACAAGCAGGGAACGCATGATTCAGGGATGCT...ACCAGCCAGCAACCTGGGCCTTGTACTGTCTGTGTTTTTAAAACCACTAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp AGACCCCTGCTTAGATTGCCATACTCGCACCATTCCAAACCTGCCTCCCTCACATTGGCAGATCCTAGTTaGATAACTGCTCAAGATGCA +
Preference number: 2 (lower is better)
Translates to: RPLLRLPYSHHSKPASLTLADPS*ITAQDA
Trigger: TGCATCTTGAGCAGTTATCCAACTAGGATCTGCCAA...TGTGAGGGAGGCAGGTTTGGAATGGTGCGAGTATGGCAATCTAAGCAGGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp AAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGGCATCTAAACCTTTTTaGCACCATCTCCCTCTGCCA +
Preference number: 2 (lower is better)
Translates to: KEQSQGHPLVEEVIGEWEASKPF*HHLPLP
Trigger: TGGCAGAGGGAGATGGTGGCAAAAAGGTTTAGATGC...CTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGAGCTCATTTCTATTTTaGAACCCATTCCCCCATTTT +
Preference number: 2 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGESSFLF*NPFPHF
Trigger: AAAATGGGGGAATGGGTTGCAAAATAGAAATGAGCT...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp CTGCATCTAAACCTTTTTGCCACCATCTCCCTCTGCCATCTCTTACTTCAGTCTAGCTGTCCATACTGCTaGCTAGAGGAGGAGACAGAT +
Preference number: 2 (lower is better)
Translates to: LHLNLFATISLCHLLLQSSCPYC*LEEETD
Trigger: ATCTGTCTCCTCCTCTAGCCAGCAGTATGGACAGCT...AGACTGAAGTAAGAGATGGCAGAGGGAGATGGTGGCAAAAAGGTTTAGATGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp CACTTTAGTGGTTTTAAAAACACAGACAGTACAAGGCCCAGGTTGCTGGCTGGTGGAGCTTGTAGTTCCTaGCTCAGTCTTTTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: HFSGFKNTDSTRPRLLAGGACSS*LSLFSG
Trigger: CCCTGAGAAAAGACTGAGCCAGGAACTACAAGCTCC...ACCAGCCAGCAACCTGGGCCTTGTACTGTCTGTGTTTTTAAAACCACTAAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR TCA 90 bp CTGCATCTAAACCTTTTTGCCACCATCTCCCTCTGCCATCTCTTACTTCAGTCTGAATTAAATGAGGGCTaGAACGGCACGCTTCAGCAT +
Preference number: 2 (lower is better)
Translates to: LHLNLFATISLCHLLLQSELNEG*NGTLQH
Trigger: ATGCTGAAGCGTGCCGTTTCAGCCCTCATTTAATTC...AGACTGAAGTAAGAGATGGCAGAGGGAGATGGTGGCAAAAAGGTTTAGATGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp AAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGGAGGAAGCTCCTCAATaGCCCTATAGGAACTACTTT +
Preference number: 2 (lower is better)
Translates to: KEQSQGHPLVEEVIGEWEEEAPQ*PYRNYF
Trigger: AAAGTAGTTCCTATAGGGGCATTGAGGAGCTTCCTC...CTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp GATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCGCAGATGAACACACGTaGGGAATCACTGTCAAATCC +
Preference number: 2 (lower is better)
Translates to: DIFSLKEQSQGHPLVEEVADEHT*GITVKS
Trigger: GGATTTGACAGTGATTCCCCACGTGTGTTCATCTGC...GACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp CACTTTAGTGGTTTTAAAAACACAGACAGTACAAGGCCCAGGTTGCTGGCTGGTCCTGGCTCTGCGGCCTaGATTAAGCTCATTTCTATT +
Preference number: 2 (lower is better)
Translates to: HFSGFKNTDSTRPRLLAGPGSAA*IKLISI
Trigger: AATAGAAATGAGCTTAATCCAGGCCGCAGAGCCAGG...ACCAGCCAGCAACCTGGGCCTTGTACTGTCTGTGTTTTTAAAACCACTAAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR TCA 90 bp CACTTTAGTGGTTTTAAAAACACAGACAGTACAAGGCCCAGGTTGCTGGCTGGTATGGCCAGTTTAGACTaGTTCTTCCTATCTGGCTTC +
Preference number: 2 (lower is better)
Translates to: HFSGFKNTDSTRPRLLAGMASLD*FFLSGF
Trigger: GAAGCCAGATAGGAAGAATCAGTCTAAACTGGCCAT...ACCAGCCAGCAACCTGGGCCTTGTACTGTCTGTGTTTTTAAAACCACTAAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp ATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCACTGACCAATCCATCCTaGGAAACCCCAATAGTGTCA +
Preference number: 2 (lower is better)
Translates to: ISSALKNSHKATHWLRKSLTNPS*ETPIVS
Trigger: TGACACTATTGGGGTTTCCCAGGATGGATTGGTCAG...TGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CCA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGCTGATTCTTCCTATCTaGCTTCTAAAGTCTAGCACC +
Preference number: 2 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVLILPI*LLKSST
Trigger: GGTGCTAGACTTTAGAAGCCAGATAGGAAGAATCAG...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR GCA 90 bp CACTTTAGTGGTTTTAAAAACACAGACAGTACAAGGCCCAGGTTGCTGGCTGGTTCTGTTCATCCAACTTaGCTCAAAAAGAAAACCATT +
Preference number: 2 (lower is better)
Translates to: HFSGFKNTDSTRPRLLAGSVHPT*LKKKTI
Trigger: AATGGTTTTCTTTTTGAGGCAAGTTGGATGAACAGA...ACCAGCCAGCAACCTGGGCCTTGTACTGTCTGTGTTTTTAAAACCACTAAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp GCGGTAGAGAGGAGACTCCGGCTGGCGACCGGGGACTaGTGGAGTGGGGTGAGCGGGCACAGGGAAGCTGGG +
Preference number: 3 (lower is better)
Translates to: AVERRLRLATGD*WSGVSGHREAG
Trigger: CCCAGCTTCCCTGTGCCCGCTCACCCCACTCCACCAGTCCCCGGTCGCCAGCCGGAGTCTCCTCTCTACCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR GCA 72 bp AGGCGCGTGCTGTGTGCACCACGGAGGGCTGGCCTCTaGCTGGCTCGGTGGGTGCAGATGAACACACGTGGG +
Preference number: 3 (lower is better)
Translates to: RRVLCAPRRAGL*LARWVQMNTRG
Trigger: CCCACGTGTGTTCATCTGCACCCACCGAGCCAGGCAGAGGCCAGCCCTCCGTGGTGCACACAGCACGCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp GGTTGCCGTGGCAGCCCTGTCTCACTAACCGGTGCGTaGCGGGAGCAGGTGGTTGAGGCCCACCCTCTAGGG +
Preference number: 3 (lower is better)
Translates to: GCRGSPVSLTGA*REQVVEAHPLG
Trigger: CCCTAGAGGGTGGGCCTCAACCACCTGCTCCCGCCACGCACCGGTTAGTGAGACAGGGCTGCCACGGCAACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR GCA 72 bp CCCTGCCATGGGGGAAGAGGTGCCGTCTTCCTCCAGTaGCTCCCTTCCCAGGATCTCCCCACCCTGGGCTCA +
Preference number: 3 (lower is better)
Translates to: PCHGGRGAVFLQ*LPSQDLPTLGS
Trigger: TGAGCCCAGGGTGGGGAGATCCTGGGAAGGGAGGCACTGGAGGAAGACGGCACCTCTTCCCCCATGGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp CATGTGCCCTGCTTTGCCAGGTGGGTCAGGGCAGGCTaGAGGAAGGAGGGTCAGTCCTGGCTGGGCTTCCCT +
Preference number: 3 (lower is better)
Translates to: HVPCFARWVRAG*RKEGQSWLGFP
Trigger: AGGGAAGCCCAGCCAGGACTGACCCTCCTTCCTCCAGCCTGCCCTGACCCACCTGGCAAAGCAGGGCACATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp GTTCCCATTCTGGGCCGGAGCCCTCTCAGGAGTGAGTaGATGGGTCCGGGGTACTGTCCCACCTTGAGGGGG +
Preference number: 3 (lower is better)
Translates to: VPILGRSPLRSE*MGPGYCPTLRG
Trigger: CCCCCTCAAGGTGGGACAGTACCCCGGACCCATCCACTCACTCCTGAGAGGGCTCCGGCCCAGAATGGGAAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR GCA 72 bp ACCTGCCTCCCTCACACCCTGCCATGGGGGAAGAGGTaGCGTCTTCCTCCAGTGCCTCCCTTCCCAGGATCT +
Preference number: 3 (lower is better)
Translates to: TCLPHTLPWGKR*RLPPVPPFPGS
Trigger: AGATCCTGGGAAGGGAGGCACTGGAGGAAGACGGCACCTCTTCCCCCATGGCAGGGTGTGAGGGAGGCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp TGGGTCAGGGCAGGCTGGAGGAAGGAGGGTCAGTCCTaGCTGGGCTTCCCTATCTCCTGGCAGTCGTGGGAA +
Preference number: 3 (lower is better)
Translates to: WVRAGWRKEGQS*LGFPISWQSWE
Trigger: TTCCCACGACTGCCAGGAGATAGGGAAGCCCAGCCAGGACTGACCCTCCTTCCTCCAGCCTGCCCTGACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CAA 90 bp GGCAGGTCAAGGCCTTGTGGCTGCTGGCCCTATCGGGCCCCTTTGTCTCATGAACACGAAGGGGTCTCCTaGGCCAGTGTCCAAGCCCCC +
Preference number: 3 (lower is better)
Translates to: GRSRPCGCWPYRAPLSHEHEGVS*ASVQAP
Trigger: GGGGGCTTGGACACTGGCCAAGGAGACCCCTTCGTG...TTCATGAGACAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGACCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp TGTGCACCACGGAGGGCTGGCCTCTGCCTGGCTCGGTaGGTGCAGATGAACACACGTGGGGAATCACTGTCA +
Preference number: 3 (lower is better)
Translates to: CAPRRAGLCLAR*VQMNTRGESLS
Trigger: TGACAGTGATTCCCCACGTGTGTTCATCTGCACCCACCGAGCCAGGCAGAGGCCAGCCCTCCGTGGTGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CAA 90 bp CACAGGTTTGGGTTCGCAGGCACGAACTTTGGAAACCGGAAGAGTCTGGCGCACCGGCAGGTCAAGGCCTaGTGGCTGCTGGCCCTATCG +
Preference number: 3 (lower is better)
Translates to: HRFGFAGTNFGNRKSLAHRQVKA*WLLALS
Trigger: CGATAGGGCCAGCAGCCACAAGGCCTTGACCTGCCG...GTGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR TCA 72 bp GGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTaGGCAGACAGTCGGCCAAAGGCCAGCCTGGAGTCA +
Preference number: 3 (lower is better)
Translates to: GAMDSPESKVSG*ADSRPKASLES
Trigger: TGACTCCAGGCTGGCCTTTGGCCGACTGTCTGCTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp GCTGGGGTGGGACTGGTGGATCCATCGTGGACCTGTTaGGCTCATGTGGTGTGGTGTCCGGAGACTGTGACT +
Preference number: 3 (lower is better)
Translates to: AGVGLVDPSWTC*AHVVWCPETVT
Trigger: AGTCACAGTCTCCGGACACCACACCACATGAGCCCAACAGGTCCACGATGGATCCACCAGTCCCACCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR TCA 72 bp GGAGGGCTGGCCTCTGCCTGGCTCGGTGGGTGCAGATaGACACACGTGGGGAATCACTGTCAAATCCAGTAC +
Preference number: 3 (lower is better)
Translates to: GGLASAWLGGCR*THVGNHCQIQY
Trigger: GTACTGGATTTGACAGTGATTCCCCACGTGTGTTCATCTGCACCCACCGAGCCAGGCAGAGGCCAGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp AAGGAAAAGGCTGGGGTGGGACTGGTGGATCCATCGTaGACCTGTTGGGCTCATGTGGTGTGGTGTCCGGAG +
Preference number: 3 (lower is better)
Translates to: KEKAGVGLVDPS*TCWAHVVWCPE
Trigger: CTCCGGACACCACACCACATGAGCCCAACAGGTCCACGATGGATCCACCAGTCCCACCCCAGCCTTTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp GACTGGCCAGAATGGAGGAAGAGCTGGAAAGACTCGTaGGCCTCAGTCCCTCATTGCAGGCTGAAGGTGGGC +
Preference number: 3 (lower is better)
Translates to: DWPEWRKSWKDS*ASVPHCRLKVG
Trigger: GCCCACCTTCAGCCTGCAATGAGGGACTGAGGCCCACGAGTCTTTCCAGCTCTTCCTCCATTCTGGCCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp CGTGAGTTGGGTTTAGGGGACAGCTGTGCAGAGAGATaGGGCATGCTGACTCGGCAGGTCAAGGCCTTGTGG +
Preference number: 3 (lower is better)
Translates to: RELGLGDSCAER*GMLTRQVKALW
Trigger: CCACAAGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCTCTGCACAGCTGTCCCCTAAACCCAACTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CAA 90 bp AGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAAAGCCCCAAATTCGTTGTaGGAGGCGGTCTCCGCTGTG +
Preference number: 3 (lower is better)
Translates to: SLAHLHQALIPHLMAGSKAPNSL*EAVSAV
Trigger: CACAGCGGAGACCGCCTCCAACAACGAATTTGGGGC...TTTGCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CAA 90 bp AGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAAATCCATCGTGGACCTGTaGGGCTCATGTGGTGTGGTG +
Preference number: 3 (lower is better)
Translates to: SLAHLHQALIPHLMAGSKSIVDL*GSCGVV
Trigger: CACCACACCACATGAGCCCAACAGGTCCACGATGGA...TTTGCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR GCA 72 bp CTGCCGAGTGACAGCATCCCTGAATCATGCGTTCCCTaGTTGTCCCAGCTTTCCTTCCATCCTCCACCCCAG +
Preference number: 3 (lower is better)
Translates to: LPSDSIPESCVP*LSQLSFHPPPQ
Trigger: CTGGGGTGGAGGATGGAAGGAAAGCTGGGACAAGCAGGGAACGCATGATTCAGGGATGCTGTCACTCGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR GCA 72 bp TGGGGAGTGACCAGCTGCCCAGGAGAAACTCCTGCATaGAGAAGAGACTCACAGGTTTGGGTTCGCAGGCAC +
Preference number: 3 (lower is better)
Translates to: WGVTSCPGETPA*RRDSQVWVRRH
Trigger: GTGCCTGCGAACCCAAACCTGTGAGTCTCTTCTGCATGCAGGAGTTTCTCCTGGGCAGCTGGTCACTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp CCTCTGCCTGGCTCGGTGGGTGCAGATGAACACACGTaGGGAATCACTGTCAAATCCAGTACTGTGCCCCAC +
Preference number: 3 (lower is better)
Translates to: PLPGSVGADEHT*GITVKSSTVPH
Trigger: GTGGGGCACAGTACTGGATTTGACAGTGATTCCCCACGTGTGTTCATCTGCACCCACCGAGCCAGGCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp GAGCATGGGAGTGGGCAGCACTTAGATTCGGAGCCATaGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGCAG +
Preference number: 3 (lower is better)
Translates to: EHGSGQHLDSEP*IVRSPRSLGEQ
Trigger: CTGCTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTGCCCACTCCCATGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CAA 90 bp AAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCTTCGAAGTTGAGCCCTaGCTAGAGATTCCGAGGTCC +
Preference number: 3 (lower is better)
Translates to: KSLAHLHQALIPHLMAGSFEVEP*LEIPRS
Trigger: GGACCTCGGAATCTCTAGCAAGGGCTCAACTTCGAA...GCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CAA 90 bp CACAGGTTTGGGTTCGCAGGCACGAACTTTGGAAACCGGAAGAGTCTGGCGCACGCGGAGCACATAGTCTaGTCCCTTCCAAAGCATGGC +
Preference number: 3 (lower is better)
Translates to: HRFGFAGTNFGNRKSLAHAEHIV*SLPKHG
Trigger: GCCATGCTTTGGAAGGGACAAGACTATGTGCTCCGC...GTGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR TCA 72 bp TTGTGGCTGCTGGCCCTATCGGGCCCCTTTGTCTCATaGAGATTGAGCACTTCTCCTGTCCCCAGCCAACTG +
Preference number: 3 (lower is better)
Translates to: LWLLALSGPFVS*RLSTSPVPSQL
Trigger: CAGTTGGCTGGGGACAGGAGAAGTGCTCAATCTTCATGAGACAAAGGGGCCCGATAGGGCCAGCAGCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR TCA 72 bp GGGGCAGAAGCCTGCTCAAAGTCCAGACACAGTCCGTaGAGAGAGAGCCCCTCTCAAGAATTAGGTCCAGGC +
Preference number: 3 (lower is better)
Translates to: GAEACSKSRHSP*RESPSQELGPG
Trigger: GCCTGGACCTAATTCTTGAGAGGGGCTCTCTCTTCACGGACTGTGTCTGGACTTTGAGCAGGCTTCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR TCA 72 bp GACGCTATGGGGTTTCTTCTCCTTAGAGCTCTTCTCTaGGGTTCCCATTCTGGGCCGGAGCCCTCTCAGGAG +
Preference number: 3 (lower is better)
Translates to: DAMGFLLLRALL*GSHSGPEPSQE
Trigger: CTCCTGAGAGGGCTCCGGCCCAGAATGGGAACCTCAGAGAAGAGCTCTAAGGAGAAGAAACCCCATAGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR GCA 72 bp TCTCTGGGGAGTGACCAGCTGCCCAGGAGAAACTCCTaGATGCAGAAGAGACTCACAGGTTTGGGTTCGCAG +
Preference number: 3 (lower is better)
Translates to: SLGSDQLPRRNS*MQKRLTGLGSQ
Trigger: CTGCGAACCCAAACCTGTGAGTCTCTTCTGCATGCAGGAGTTTCTCCTGGGCAGCTGGTCACTCCCCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR GCA 72 bp TCCATGAAGGCCCAGCTTCTCTGGGGAGTGACCAGCTaGCCAGGAGAAACTCCTGCATGCAGAAGAGACTCA +
Preference number: 3 (lower is better)
Translates to: SMKAQLLWGVTS*PGETPACRRDS
Trigger: TGAGTCTCTTCTGCATGCAGGAGTTTCTCCTGGGCAGCTGGTCACTCCCCAGAGAAGCTGGGCCTTCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp TGGGAAACCCCAATAGTGTCATTGATTGCCACATCCTaGGCTGCATCTTCTAGCGCCCACCTCTCCCGACCC +
Preference number: 3 (lower is better)
Translates to: WETPIVSLIATS*AASSSAHLSRP
Trigger: GGGTCGGGAGAGGTGGGCGCTAGAAGATGCAGCCCAGGATGTGGCAATCAATGACACTATTGGGGTTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp CTCCCTTCAGCCCTCTGTTCCTCCCCACATCGACTCTaGCCGGAACCATCCATCTTACTGTTCTCCTGCATC +
Preference number: 3 (lower is better)
Translates to: LPSALCSSPHRL*PEPSILLFSCI
Trigger: GATGCAGGAGAACAGTAAGATGGATGGTTCCGGCCAGAGTCGATGTGGGGAGGAACAGAGGGCTGAAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp GAAGAGAGCTGTGTCCACAGCACGAAGGGGTCTCCTTaGCCAGTGTCCAAGCCCCCTTTCCTGGATATCTTC +
Preference number: 3 (lower is better)
Translates to: EESCVHSTKGSP*PVSKPPFLDIF
Trigger: GAAGATATCCAGGAAAGGGGGCTTGGACACTGGCCAAGGAGACCCCTTCGTGCTGTGGACACAGCTCTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CAA 90 bp AGGGACTGGCCAGAATGGAGGAAGAGCTGGAAAGACTCGTGGGCCTCAGTCCCTACCCCAATAGTGTCATaGATTGCCACATCCTGGGCT +
Preference number: 3 (lower is better)
Translates to: RDWPEWRKSWKDSWASVPTPIVS*IATSWA
Trigger: AGCCCAGGATGTGGCAATCAATGACACTATTGGGGT...AGGGACTGAGGCCCACGAGTCTTTCCAGCTCTTCCTCCATTCTGGCCAGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR GCA 72 bp GGAATCTGGCTGCCGAGTGACAGCATCCCTGAATCATaGGTTCCCTGCTTGTCCCAGCTTTCCTTCCATCCT +
Preference number: 3 (lower is better)
Translates to: GIWLPSDSIPES*VPCLSQLSFHP
Trigger: AGGATGGAAGGAAAGCTGGGACAAGCAGGGAACGCATGATTCAGGGATGCTGTCACTCGGCAGCCAGATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp AGAGACTCACAGGTTTGGGTTCGCAGGCACGAACTTTaGAAACCGGAAGAGTCTGGCGCACTTACACCAGGC +
Preference number: 3 (lower is better)
Translates to: RDSQVWVRRHEL*KPEESGALTPG
Trigger: GCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTGAGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CAA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGGGCCTCAGTCCCTCATaGCAGGCTGAAGGTGGGCAG +
Preference number: 3 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVGLSPS*QAEGGQ
Trigger: CTGCCCACCTTCAGCCTGCAATGAGGGACTGAGGCC...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CAA 90 bp AAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCATACAGAAACGTGAGTaGGGTTTAGGGGACAGCTGT +
Preference number: 3 (lower is better)
Translates to: KSLAHLHQALIPHLMAGSIQKRE*GLGDSC
Trigger: ACAGCTGTCCCCTAAACCCAACTCACGTTTCTGTAT...GCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR GCA 72 bp AGCCTGGAGTCAAAGAGACCAGACCCCTGCTTAGATTaGCATACTCGCACCATTCCAAACCTGCCTCCCTCA +
Preference number: 3 (lower is better)
Translates to: SLESKRPDPCLD*HTRTIPNLPPS
Trigger: TGAGGGAGGCAGGTTTGGAATGGTGCGAGTATGGCAATCTAAGCAGGGGTCTGGTCTCTTTGACTCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp AGGGGTCTCCTTGGCCAGTGTCCAAGCCCCCTTTCCTaGATATCTTCAGCCTTAAAGAACAGTCACAAGGCC +
Preference number: 3 (lower is better)
Translates to: RGLLGQCPSPLS*ISSALKNSHKA
Trigger: GGCCTTGTGACTGTTCTTTAAGGCTGAAGATATCCAGGAAAGGGGGCTTGGACACTGGCCAAGGAGACCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp GGAGAAACTCCTGCATGCAGAAGAGACTCACAGGTTTaGGTTCGCAGGCACGAACTTTGGAAACCGGAAGAG +
Preference number: 3 (lower is better)
Translates to: GETPACRRDSQV*VRRHELWKPEE
Trigger: CTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTGAGTCTCTTCTGCATGCAGGAGTTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp CCTCCTCCACTTTGCAAAACGGAGCCTCCTTTCTCTTaGAAGCCAGACATATCCTCTCTGACGCTATGGGGT +
Preference number: 3 (lower is better)
Translates to: PPPLCKTEPPFS*KPDISSLTLWG
Trigger: ACCCCATAGCGTCAGAGAGGATATGTCTGGCTTCCAAGAGAAAGGAGGCTCCGTTTTGCAAAGTGGAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CAA 90 bp AAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCCTCTGTTCATCCAACTaGCCTCAAAAAGAAAACCAT +
Preference number: 3 (lower is better)
Translates to: KSLAHLHQALIPHLMAGSLCSSN*PQKENH
Trigger: ATGGTTTTCTTTTTGAGGCAAGTTGGATGAACAGAG...GCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp GAGTGGCACCCCAGTATCCACTTGGCAGATCCTAGTTaGATAACTGCTCAAGATGCAAAGGGAGAATGGGTG +
Preference number: 3 (lower is better)
Translates to: EWHPSIHLADPS*ITAQDAKGEWV
Trigger: CACCCATTCTCCCTTTGCATCTTGAGCAGTTATCCAACTAGGATCTGCCAAGTGGATACTGGGGTGCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CAA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGGGAGCCTCCTTTCTCTaGGAAGCCAGACATATCCTC +
Preference number: 3 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVGASFL*EARHIL
Trigger: GAGGATATGTCTGGCTTCCAAGAGAAAGGAGGCTCC...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR TCA 72 bp GAGGTTTGGGATACTGGCCTAAGACATACAGAAACGTaGGTTGGGTTTAGGGGACAGCTGTGCAGAGAGATG +
Preference number: 3 (lower is better)
Translates to: EVWDTGLRHTET*VGFRGQLCREM
Trigger: CATCTCTCTGCACAGCTGTCCCCTAAACCCAACTCACGTTTCTGTATGTCTTAGGCCAGTATCCCAAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp TTGAGGAAGTCATTGGAGAATGGGAGTTTCGGAATCTaGCTGCCGAGTGACAGCATCCCTGAATCATGCGTT +
Preference number: 3 (lower is better)
Translates to: LRKSLENGSFGI*LPSDSIPESCV
Trigger: AACGCATGATTCAGGGATGCTGTCACTCGGCAGCCAGATTCCGAAACTCCCATTCTCCAATGACTTCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CAA 90 bp CTCACTGGTGGAGTGAGGCACGAATCTAAAGGGGATGGGAAGACCTTCTGTGGGAAGCTCATTTCTATTTaGCAACCCATTCCCCCATTT +
Preference number: 3 (lower is better)
Translates to: LTGGVRHESKGDGKTFCGKLISI*QPIPPF
Trigger: AAATGGGGGAATGGGTTGCAAAATAGAAATGAGCTT...CCCACAGAAGGTCTTCCCATCCCCTTTAGATTCGTGCCTCACTCCACCAGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CAA 90 bp CACTTTAGTGGTTTTAAAAACACAGACAGTACAAGGCCCAGGTTGCTGGCTGGTAAGAGACTCACAGGTTaGGGTTCGCAGGCACGAACT +
Preference number: 3 (lower is better)
Translates to: HFSGFKNTDSTRPRLLAGKRLTG*GSQART
Trigger: AGTTCGTGCCTGCGAACCCAAACCTGTGAGTCTCTT...ACCAGCCAGCAACCTGGGCCTTGTACTGTCTGTGTTTTTAAAACCACTAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp CCTAGTTGGATAACTGCTCAAGATGCAAAGGGAGAATaGGTGGAAAGAACAGTGACGTGGAAGAGGTTTGGG +
Preference number: 3 (lower is better)
Translates to: PSWITAQDAKGE*VERTVTWKRFG
Trigger: CCCAAACCTCTTCCACGTCACTGTTCTTTCCACCCATTCTCCCTTTGCATCTTGAGCAGTTATCCAACTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CAA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTCAAGTCTTTCCAATATaGGGGCATGTATTGATTTCT +
Preference number: 3 (lower is better)
Translates to: LWKPEESGALTPGSNPPPQVFPI*GHVLIS
Trigger: AGAAATCAATACATGCCCCAATATTGGAAAGACTTG...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CAA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGTCAGTTGAAACAGATTaGCTTTTTCGCTATTCCTCT +
Preference number: 3 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGESVETD*LFRYSS
Trigger: AGAGGAATAGCGAAAAAGCAAATCTGTTTCAACTGA...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp TCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTaGTTGAGGAAGTCATTGGAGAATGGGAGTTTCGGA +
Preference number: 3 (lower is better)
Translates to: SSALKNSHKATH*LRKSLENGSFG
Trigger: TCCGAAACTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp TTCTCTTGGAAGCCAGACATATCCTCTCTGACGCTATaGGGTTTCTTCTCCTTAGAGCTCTTCTCTGAGGTT +
Preference number: 3 (lower is better)
Translates to: FSWKPDISSLTL*GFFSLELFSEV
Trigger: AACCTCAGAGAAGAGCTCTAAGGAGAAGAAACCCCATAGCGTCAGAGAGGATATGTCTGGCTTCCAAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CAA 90 bp ATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCAAAAAAGCTGAGTTTATaGCTCACGGGAAACTCTGCC +
Preference number: 3 (lower is better)
Translates to: ISSALKNSHKATHWLRKSKKLSL*LTGNSA
Trigger: GGCAGAGTTTCCCGTGAGCAATAAACTCAGCTTTTT...TGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CCA 72 bp CCAAAGCATGGCCAGTTTAGACTGATTCTTCCTATCTaGCTTCTAAAGTCTAGCACCCTCCTAAAGTTACTC +
Preference number: 3 (lower is better)
Translates to: PKHGQFRLILPI*LLKSSTLLKLL
Trigger: GAGTAACTTTAGGAGGGTGCTAGACTTTAGAAGCCAGATAGGAAGAATCAGTCTAAACTGGCCATGCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR-3UTR CAA 90 bp AAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGTGTCTTTTTAGCTTTTaGCATCTCTGTTGTTGCCAT +
Preference number: 3 (lower is better)
Translates to: KEQSQGHPLVEEVIGEWECLFSF*HLCCCH
Trigger: ATGGCAACAACAGAGATGCAAAAAGCTAAAAAGACA...CTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp TGTGCAGAGAGATGGGGCATGCTGACTCGGCAGGTCAAGGCCTTGTGGCTGCTGGGCTTCTCCTCGTCCTaGCGGGGGAGGCAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: CAERWGMLTRQVKALWLLGFSSS*RGRQRS
Trigger: GCTGCGCTGCCTCCCCCGGCAGGACGAGGAGAAGCC...CAGCAGCCACAAGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCTCTGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp TGTGCAGAGAGATGGGGCATGCTGACTCGGCAGGTCAAGGCCTTGTGGCTGCTGCTGGCGACCGGGGACTaGTGGAGTGGGGTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: CAERWGMLTRQVKALWLLLATGD*WSGVSG
Trigger: CCCGCTCACCCCACTCCACCAGTCCCCGGTCGCCAG...CAGCAGCCACAAGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCTCTGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp GGCAGGTCAAGGCCTTGTGGCTGCTGGCCCTATCGGGCCCCTTTGTCTCATGAATGGACCTCGTGCGCCTaGCTTCCTCCCCTCATGGGG +
Preference number: 4 (lower is better)
Translates to: GRSRPCGCWPYRAPLSHEWTSCA*LPPLMG
Trigger: CCCCATGAGGGGAGGAAGGCAGGCGCACGAGGTCCA...TTCATGAGACAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGACCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCCGGGCACAGGGAAGCTaGGGTCCCCTTCCCCTCGGA +
Preference number: 4 (lower is better)
Translates to: KSLAHLHQALIPHLMAGSRAQGS*GPLPLG
Trigger: TCCGAGGGGAAGGGGACCCCAGCTTCCCTGTGCCCG...GCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp TGTTCCTCCCCACATCGACTCTGGCCGGAACCATCCATCTTACTGTTCTCCTGCCTCAGCTGCCAGCGGTaGGCGGCGCCGCAGAACAGG +
Preference number: 4 (lower is better)
Translates to: CSSPHRLWPEPSILLFSCLSCQR*AAPQNR
Trigger: CCTGTTCTGCGGCGCCGCGCACCGCTGGCAGCTGAG...GCAGGAGAACAGTAAGATGGATGGTTCCGGCCAGAGTCGATGTGGGGAGGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp AGGGACTGGCCAGAATGGAGGAAGAGCTGGAAAGACTCGTGGGCCTCAGTCCCTGCCTCCCTCACACCCTaGCATGGGGGAAGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: RDWPEWRKSWKDSWASVPASLTP*HGGRGA
Trigger: GGCACCTCTTCCCCCATGGCAGGGTGTGAGGGAGGC...AGGGACTGAGGCCCACGAGTCTTTCCAGCTCTTCCTCCATTCTGGCCAGTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 72 bp GGCTGGGGTGGGACTGGTGGATCCATCGTGGACCTGTaGGGCTCATGTGGTGTGGTGTCCGGAGACTGTGAC +
Preference number: 4 (lower is better)
Translates to: GWGGTGGSIVDL*GSCGVVSGDCD
Trigger: GTCACAGTCTCCGGACACCACACCACATGAGCCCAACAGGTCCACGATGGATCCACCAGTCCCACCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 72 bp GAGAGATGGGGCATGCTGACTCGGCAGGTCAAGGCCTaGTGGCTGCTGGCCCTATCGGGCCCCTTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: ERWGMLTRQVKA*WLLALSGPFVS
Trigger: TGAGACAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp CTCACTGGTGGAGTGAGGCACGAATCTAAAGGGGATGGGAAGACCTTCTGTGGGGGCCAGGGCTGGACGTaGAAGTTGGGCCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LTGGVRHESKGDGKTFCGGQGWT*KLGPCL
Trigger: CAGGCAGGGGCCCAACTTTCACGTCCAGCCCTGGCC...CCCACAGAAGGTCTTCCCATCCCCTTTAGATTCGTGCCTCACTCCACCAGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp TGTTCCTCCCCACATCGACTCTGGCCGGAACCATCCATCTTACTGTTCTCCTGCGCGGGAGCAGGTGGTTaGGGCCCACCCTCTAGGGGA +
Preference number: 4 (lower is better)
Translates to: CSSPHRLWPEPSILLFSCAGAGG*GPPSRG
Trigger: TCCCCTAGAGGGTGGGCCTCAACCACCTGCTCCCGC...GCAGGAGAACAGTAAGATGGATGGTTCCGGCCAGAGTCGATGTGGGGAGGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp AAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCCAGGTTGCTGGCTGGTaGAACCCCTGTCCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: KSLAHLHQALIPHLMAGSQVAGW*NPCPSS
Trigger: GGACGAGGGACAGGGGTTTCACCAGCCAGCAACCTG...GCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp AGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAAAACTGGTGGAGTGGGGTaGGCGGGCACAGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SLAHLHQALIPHLMAGSKTGGVG*AGTGKL
Trigger: CAGCTTCCCTGTGCCCGCTCACCCCACTCCACCAGT...TTTGCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp AGGGACTGGCCAGAATGGAGGAAGAGCTGGAAAGACTCGTGGGCCTCAGTCCCTCTGCGGCAGGGGCCCTaGTCAGACTCCTGTCTCATC +
Preference number: 4 (lower is better)
Translates to: RDWPEWRKSWKDSWASVPLRQGP*SDSCLI
Trigger: GATGAGACAGGAGTCTGAGCAGGGCCCCTGCCGCAG...AGGGACTGAGGCCCACGAGTCTTTCCAGCTCTTCCTCCATTCTGGCCAGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp AGACCCCTGCTTAGATTGCCATACTCGCACCATTCCAAACCTGCCTCCCTCACACGGAGGGCTGGCCTCTaGCTGGCTCGGTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: RPLLRLPYSHHSKPASLTRRAGL*LARWVQ
Trigger: CTGCACCCACCGAGCCAGGCAGAGGCCAGCCCTCCG...TGTGAGGGAGGCAGGTTTGGAATGGTGCGAGTATGGCAATCTAAGCAGGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp GGCAGGTCAAGGCCTTGTGGCTGCTGGCCCTATCGGGCCCCTTTGTCTCATGAACCATGGGGGAAGAGGTaGCGTCTTCCTCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: GRSRPCGCWPYRAPLSHEPWGKR*RLPPVP
Trigger: AGGCACTGGAGGAAGACGGCACCTCTTCCCCCATGG...TTCATGAGACAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGACCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTCCTCCCTGGACCTCGTaGGCCTGCCTTCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LWKPEESGALTPGSNPPPPPWTS*ACLPPL
Trigger: GAGGGGAGGAAGGCAGGCGCACGAGGTCCAGGGAGG...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp GGCAGGTCAAGGCCTTGTGGCTGCTGGCCCTATCGGGCCCCTTTGTCTCATGAATGTCTCACTAACCGGTaGGTGGCGGGAGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GRSRPCGCWPYRAPLSHECLTNR*VAGAGG
Trigger: ACCACCTGCTCCCGCCACGCACCGGTTAGTGAGACA...TTCATGAGACAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp GGCAGGTCAAGGCCTTGTGGCTGCTGGCCCTATCGGGCCCCTTTGTCTCATGAATGGGCCGGAAGATCTTaGGGGAGTAGGTCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: GRSRPCGCWPYRAPLSHEWAGRS*GSRSPR
Trigger: CCGAGGAGACCTACTCCCCCAAGATCTTCCGGCCCA...TTCATGAGACAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp GGCAGGTCAAGGCCTTGTGGCTGCTGGCCCTATCGGGCCCCTTTGTCTCATGAAAGGGTCAGTCCTGGCTaGGCTTCCCTATCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GRSRPCGCWPYRAPLSHERVSPG*ASLSPG
Trigger: GCCAGGAGATAGGGAAGCCCAGCCAGGACTGACCCT...TTCATGAGACAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp GGCAGGTCAAGGCCTTGTGGCTGCTGGCCCTATCGGGCCCCTTTGTCTCATGAAGCAGGAGGACCGCGGTaGGCAACACCATCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GRSRPCGCWPYRAPLSHEAGGPR*ATPSSL
Trigger: AAGAGAAGATGGTGTTGCTCACCGCGGTCCTCCTGC...TTCATGAGACAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGACCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp TGTGCAGAGAGATGGGGCATGCTGACTCGGCAGGTCAAGGCCTTGTGGCTGCTGCTCGGTGGGTGCAGATaGACACACGTGGGGAATCAC +
Preference number: 4 (lower is better)
Translates to: CAERWGMLTRQVKALWLLLGGCR*THVGNH
Trigger: GTGATTCCCCACGTGTGTTCATCTGCACCCACCGAG...CAGCAGCCACAAGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCTCTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp TGTGCAGAGAGATGGGGCATGCTGACTCGGCAGGTCAAGGCCTTGTGGCTGCTGAGCTTCTCTGGGGAGTaGCCAGCTGCCCAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: CAERWGMLTRQVKALWLLSFSGE*PAAQEK
Trigger: TTTCTCCTGGGCAGCTGGTCACTCCCCAGAGAAGCT...CAGCAGCCACAAGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCTCTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp TGTTCCTCCCCACATCGACTCTGGCCGGAACCATCCATCTTACTGTTCTCCTGCTTTCTAACCCTCAGCTaGCAGCGGTGCGCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: CSSPHRLWPEPSILLFSCFLTLS*QRCAAP
Trigger: CGGCGCCGCGCACCGCTGGCAGCTGAGGGTTAGAAA...GCAGGAGAACAGTAAGATGGATGGTTCCGGCCAGAGTCGATGTGGGGAGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp TGTGCAGAGAGATGGGGCATGCTGACTCGGCAGGTCAAGGCCTTGTGGCTGCTGGCAGGAGAGCGAGAGTaGAGGGATAAAGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: CAERWGMLTRQVKALWLLAGERE*RDKGAK
Trigger: CTTGGCCCCTTTATCCCTGCACTCTCGCTCTCCTGC...CAGCAGCCACAAGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCTCTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGTCGCAGGGCTCGCAGTaGACGAAGGAGCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGESQGSQ*TKEPRL
Trigger: GAGCCTGGGCTCCTTCGTGCACTGCGAGCCCTGCGA...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAAAAGCCTTGCAACAGGTTaGGGGAAGCAGGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SLAHLHQALIPHLMAGSKSLATG*GKQGSA
Trigger: GGCGCTGCCCTGCTTCCCCCAACCTGTTGCAAGGCT...TTTGCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAAAGCTGGACGTGAAAGTTaGGCCCCTGCCTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: SLAHLHQALIPHLMAGSKAGRES*APAWSR
Trigger: CCGAGACCAGGCAGGGGCCCAACTTTCACGTCCAGC...TTTGCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAGGCTGGGGTGGGACTaGTGGATCCATCGTGGACCT +
Preference number: 4 (lower is better)
Translates to: KSLAHLHQALIPHLMAGSRLGWD*WIHRGP
Trigger: AGGTCCACGATGGATCCACCAGTCCCACCCCAGCCT...GCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CACAGGTTTGGGTTCGCAGGCACGAACTTTGGAAACCGGAAGAGTCTGGCGCACCAGGTCAAGGCCTTGTaGCTGCTGGCCCTATCGGGC +
Preference number: 4 (lower is better)
Translates to: HRFGFAGTNFGNRKSLAHQVKAL*LLALSG
Trigger: GCCCGATAGGGCCAGCAGCCACAAGGCCTTGACCTG...GTGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp TGTGCAGAGAGATGGGGCATGCTGACTCGGCAGGTCAAGGCCTTGTGGCTGCTGTCAGGAGTGAGTGGATaGGTCCGGGGTACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: CAERWGMLTRQVKALWLLSGVSG*VRGTVP
Trigger: TGGGACAGTACCCCGGACCCATCCACTCACTCCTGA...CAGCAGCCACAAGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCTCTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AGGGACTGGCCAGAATGGAGGAAGAGCTGGAAAGACTCGTGGGCCTCAGTCCCTCAAGGCCCAGGTTGCTaGCTGGTGAAACCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: RDWPEWRKSWKDSWASVPQGPGC*LVKPLS
Trigger: GGACAGGGGTTTCACCAGCCAGCAACCTGGGCCTTG...AGGGACTGAGGCCCACGAGTCTTTCCAGCTCTTCCTCCATTCTGGCCAGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGGAGCCCTCTCAGGAGTaGGTGGATGGGTCCGGGGTA +
Preference number: 4 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGEEPSQE*VDGSGV
Trigger: TACCCCGGACCCATCCACTCACTCCTGAGAGGGCTC...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp AAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAGCAGATGCCACGTTTaGGGCCACGGGAAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: KSLAHLHQALIPHLMAGSSRCHV*GHGKVC
Trigger: GCAAACCTTCCCGTGGCCGCAAACGTGGCATCTGCT...GCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp TGTGCAGAGAGATGGGGCATGCTGACTCGGCAGGTCAAGGCCTTGTGGCTGCTGCGCATCACTCAACGTTaGTGCTGTCGAAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: CAERWGMLTRQVKALWLLRITQR*CCRRCG
Trigger: GCCACACCTTCGACAGCAGCAACGTTGAGTGATGCG...CAGCAGCCACAAGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCTCTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGCCATGTGCCCTGCTTTaGCAGGTGGGTCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGEPCALL*QVGQGR
Trigger: CCTGCCCTGACCCACCTGGCAAAGCAGGGCACATGG...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTCGGCCATCTCAGAGGTaGTGGGCTCCTCGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: LWKPEESGALTPGSNPPPRPSQR*WAPRAH
Trigger: GTGAGCACGAGGAGCCCACCACCTCTGAGATGGCCG...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp TGTGCAGAGAGATGGGGCATGCTGACTCGGCAGGTCAAGGCCTTGTGGCTGCTGCTGGTGGATCCATCGTaGACCTGTTGGGCTCATGTG +
Preference number: 4 (lower is better)
Translates to: CAERWGMLTRQVKALWLLLVDPS*TCWAHV
Trigger: CACATGAGCCCAACAGGTCCACGATGGATCCACCAG...CAGCAGCCACAAGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCTCTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCCTGGGGTGGGACTGGTaGATCCATCGTGGACCTGTT +
Preference number: 4 (lower is better)
Translates to: KSLAHLHQALIPHLMAGSLGWDW*IHRGPV
Trigger: AACAGGTCCACGATGGATCCACCAGTCCCACCCCAG...GCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CTCACTGGTGGAGTGAGGCACGAATCTAAAGGGGATGGGAAGACCTTCTGTGGGAGGCCTTGTGGCTGCTaGCCCTATCGGGCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LTGGVRHESKGDGKTFCGRPCGC*PYRAPL
Trigger: CAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCT...CCCACAGAAGGTCTTCCCATCCCCTTTAGATTCGTGCCTCACTCCACCAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAGCTGTGCAGAGAGATaGGGCATGCTGACTCGGCAG +
Preference number: 4 (lower is better)
Translates to: KSLAHLHQALIPHLMAGSSCAER*GMLTRQ
Trigger: CTGCCGAGTCAGCATGCCCCATCTCTCTGCACAGCT...GCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAAACCCCCACCTGATGGCTaGCAGCAAAGAGCCAACGCA +
Preference number: 4 (lower is better)
Translates to: SLAHLHQALIPHLMAGSKPPPDG*QQRANA
Trigger: TGCGTTGGCTCTTTGCTGCCAGCCATCAGGTGGGGG...TTTGCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CACAGGTTTGGGTTCGCAGGCACGAACTTTGGAAACCGGAAGAGTCTGGCGCACGGAGTCCAAGGTCTCTaGGTGAGCAGACAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: HRFGFAGTNFGNRKSLAHGVQGL*VSRQSA
Trigger: GGCCGACTGTCTGCTCACCCAGAGACCTTGGACTCC...GTGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp CTGCATCTAAACCTTTTTGCCACCATCTCCCTCTGCCATCTCTTACTTCAGTCTCGCAGCCCGGCTCCTTaGCCAGCTCGCAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LHLNLFATISLCHLLLQSRSPAP*PARSPG
Trigger: CCCTGGGCTGCGAGCTGGTCAAGGAGCCGGGCTGCG...AGACTGAAGTAAGAGATGGCAGAGGGAGATGGTGGCAAAAAGGTTTAGATGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp TGTTCCTCCCCACATCGACTCTGGCCGGAACCATCCATCTTACTGTTCTCCTGCAGAGATGGGGCATGCTaGCTCGGCAGGTCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: CSSPHRLWPEPSILLFSCRDGAC*LGRSRP
Trigger: AGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCT...GCAGGAGAACAGTAAGATGGATGGTTCCGGCCAGAGTCGATGTGGGGAGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp AGGGACTGGCCAGAATGGAGGAAGAGCTGGAAAGACTCGTGGGCCTCAGTCCCTTCCAGACACAGTCCGTaGAGAGAGAGCCCCTCTCAA +
Preference number: 4 (lower is better)
Translates to: RDWPEWRKSWKDSWASVPSRHSP*RESPSQ
Trigger: TTGAGAGGGGCTCTCTCTTCACGGACTGTGTCTGGA...AGGGACTGAGGCCCACGAGTCTTTCCAGCTCTTCCTCCATTCTGGCCAGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp CTCACTGGTGGAGTGAGGCACGAATCTAAAGGGGATGGGAAGACCTTCTGTGGGGTAAGAGGCGTTGGCTaGAGCCGAGAGGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LTGGVRHESKGDGKTFCGVRGVG*SREGGR
Trigger: TCTCCCACCCTCTCGGCTGCAGCCAACGCCTCTTAC...CCCACAGAAGGTCTTCCCATCCCCTTTAGATTCGTGCCTCACTCCACCAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp AGACCCCTGCTTAGATTGCCATACTCGCACCATTCCAAACCTGCCTCCCTCACACCTGCCTGGTCTCGGTaGATGTCCTTCCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: RPLLRLPYSHHSKPASLTPAWSR*MSFLPT
Trigger: GGTGGGCAGGAAGGACATGCACCGAGACCAGGCAGG...TGTGAGGGAGGCAGGTTTGGAATGGTGCGAGTATGGCAATCTAAGCAGGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp TGTGCAGAGAGATGGGGCATGCTGACTCGGCAGGTCAAGGCCTTGTGGCTGCTGGGAGAGACAACACTCTaGCCAGGTAAGAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: CAERWGMLTRQVKALWLLGETTL*PGKRRG
Trigger: TCCTCTCCTCTTACCTGGGCAGAGTGTTGTCTCTCC...CAGCAGCCACAAGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCTCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp TGTGCAGAGAGATGGGGCATGCTGACTCGGCAGGTCAAGGCCTTGTGGCTGCTGAGCATCCCTGAATCATaGGTTCCCTGCTTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: CAERWGMLTRQVKALWLLSIPES*VPCLSQ
Trigger: CTGGGACAAGCAGGGAACGCATGATTCAGGGATGCT...CAGCAGCCACAAGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCTCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp TGTGCAGAGAGATGGGGCATGCTGACTCGGCAGGTCAAGGCCTTGTGGCTGCTGTTTAGGGGACAGCTGTaGAGAGAGATGGGGCATGCT +
Preference number: 4 (lower is better)
Translates to: CAERWGMLTRQVKALWLLFRGQL*REMGHA
Trigger: AGCATGCCCCATCTCTCTGCACAGCTGTCCCCTAAA...CAGCAGCCACAAGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCTCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp CACAGGTTTGGGTTCGCAGGCACGAACTTTGGAAACCGGAAGAGTCTGGCGCACTGGGGAGTGACCAGCTaGCCAGGAGAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HRFGFAGTNFGNRKSLAHWGVTS*PGETPA
Trigger: TGCAGGAGTTTCTCCTGGGCAGCTGGTCACTCCCCA...GTGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp TGTGCAGAGAGATGGGGCATGCTGACTCGGCAGGTCAAGGCCTTGTGGCTGCTGTCCCCACATCGACTCTaGCCGGAACCATCCATCTTA +
Preference number: 4 (lower is better)
Translates to: CAERWGMLTRQVKALWLLSPHRL*PEPSIL
Trigger: TAAGATGGATGGTTCCGGCCAGAGTCGATGTGGGGA...CAGCAGCCACAAGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCTCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AGGGACTGGCCAGAATGGAGGAAGAGCTGGAAAGACTCGTGGGCCTCAGTCCCTGGGAGTTTCGGAATCTaGCTGCCGAGTGACAGCATC +
Preference number: 4 (lower is better)
Translates to: RDWPEWRKSWKDSWASVPGSFGI*LPSDSI
Trigger: GATGCTGTCACTCGGCAGCCAGATTCCGAAACTCCC...AGGGACTGAGGCCCACGAGTCTTTCCAGCTCTTCCTCCATTCTGGCCAGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CTCACTGGTGGAGTGAGGCACGAATCTAAAGGGGATGGGAAGACCTTCTGTGGGACGAAGGGGTCTCCTTaGCCAGTGTCCAAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LTGGVRHESKGDGKTFCGTKGSP*PVSKPP
Trigger: AGGGGGCTTGGACACTGGCCAAGGAGACCCCTTCGT...CCCACAGAAGGTCTTCCCATCCCCTTTAGATTCGTGCCTCACTCCACCAGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCGAAACCGGAAGAGTCTaGCGCACTTACACCAGGCTC +
Preference number: 4 (lower is better)
Translates to: KSLAHLHQALIPHLMAGSETGRV*RTYTRL
Trigger: GAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTC...GCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTAAGGCCCAGCTTCTCTaGGGAGTGACCAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LWKPEESGALTPGSNPPPKAQLL*GVTSCP
Trigger: TGGGCAGCTGGTCACTCCCCAGAGAAGCTGGGCCTT...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTAGAAAAGGGCCTCCCTaGACCTCGTGCGCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LWKPEESGALTPGSNPPPRKGPP*TSCACL
Trigger: AAGGCAGGCGCACGAGGTCCAGGGAGGCCCTTTTCT...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGTCACTAACCGGTGCGTaGCGGGAGCAGGTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGESLTGA*REQVVE
Trigger: CTCAACCACCTGCTCCCGCCACGCACCGGTTAGTGA...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CACAGGTTTGGGTTCGCAGGCACGAACTTTGGAAACCGGAAGAGTCTGGCGCACCCTCTCAGGAGTGAGTaGATGGGTCCGGGGTACTGT +
Preference number: 4 (lower is better)
Translates to: HRFGFAGTNFGNRKSLAHPLRSE*MGPGYC
Trigger: ACAGTACCCCGGACCCATCCACTCACTCCTGAGAGG...GTGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp CAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGTTTCGGAAGCCTCCATGTGTCTaGGGCAGGGGCCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: QSQGHPLVEEVIGEWEFRKPPCV*GRGPAQ
Trigger: CTGAGCAGGGCCCCTGCCGCAGACACATGGAGGCTT...CCGAAACTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp CACAGGTTTGGGTTCGCAGGCACGAACTTTGGAAACCGGAAGAGTCTGGCGCACCGTCAACGTACTCCATaGCTGGCAGCTTCATCCCGT +
Preference number: 4 (lower is better)
Translates to: HRFGFAGTNFGNRKSLAHRQRTP*LAASSR
Trigger: ACGGGATGAAGCTGCCAGGCATGGAGTACGTTGACG...GTGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp AGGGACTGGCCAGAATGGAGGAAGAGCTGGAAAGACTCGTGGGCCTCAGTCCCTTCCAGCTGTCCATACTaGTGGCTAGAGGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: RDWPEWRKSWKDSWASVPSSCPY*WLEEET
Trigger: TGTCTCCTCCTCTAGCCAGCAGTATGGACAGCTGGA...AGGGACTGAGGCCCACGAGTCTTTCCAGCTCTTCCTCCATTCTGGCCAGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp AAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGGAGGCGCGTGCTGTGTaGACCACGGAGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: KEQSQGHPLVEEVIGEWEEARAV*TTEGWP
Trigger: AGGCCAGCCCTCCGTGGTGCACACAGCACGCGCCTC...CTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp TGTGCAGAGAGATGGGGCATGCTGACTCGGCAGGTCAAGGCCTTGTGGCTGCTGGTCTCCGCTGTGTCATaGCATGAGCAAAGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: CAERWGMLTRQVKALWLLVSAVS*HEQRVK
Trigger: CTTCACTCTTTGCTCATGGCATGACACAGCGGAGAC...CAGCAGCCACAAGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCTCTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp CAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGTTTCGGTCAAGGCCTTGTGGCTaGTGGCCCTATCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: QSQGHPLVEEVIGEWEFRSRPCG*WPYRAP
Trigger: AGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGA...CCGAAACTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp CAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGTTTCGGCCTCCCCATGTGCCCTaGTTTGCCAGGTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: QSQGHPLVEEVIGEWEFRPPHVP*FARWVR
Trigger: CCTGACCCACCTGGCAAAGCAGGGCACATGGGGAGG...CCGAAACTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp TGTTCCTCCCCACATCGACTCTGGCCGGAACCATCCATCTTACTGTTCTCCTGCGTACAAGGCCCAGGTTaGTGGCTGGTGAAACCCCTG +
Preference number: 4 (lower is better)
Translates to: CSSPHRLWPEPSILLFSCVQGPG*WLVKPL
Trigger: CAGGGGTTTCACCAGCCAGCAACCTGGGCCTTGTAC...GCAGGAGAACAGTAAGATGGATGGTTCCGGCCAGAGTCGATGTGGGGAGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp TGTTCCTCCCCACATCGACTCTGGCCGGAACCATCCATCTTACTGTTCTCCTGCAGATGCGGGTGTGTTTaGGCCGGAAGATCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: CSSPHRLWPEPSILLFSCRCGCV*AGRSWG
Trigger: CCCCCAAGATCTTCCGGCCCAAACACACCCGCATCT...GCAGGAGAACAGTAAGATGGATGGTTCCGGCCAGAGTCGATGTGGGGAGGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGTTTCGGACGGGGCACCATGCGTaGGCTGGCTTTGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QSQGHPLVEEVIGEWEFRTGHHA*AGFELL
Trigger: CAGGAGCTCAAAGCCAGCCCACGCATGGTGCCCCGT...CCGAAACTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAAAAGGCTGGGAGGAATGTaGGGGGAGCTTGTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SLAHLHQALIPHLMAGSKRLGGM*GELVVP
Trigger: AGGAACTACAAGCTCCCCCCACATTCCTCCCAGCCT...TTTGCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp GGCAGGTCAAGGCCTTGTGGCTGCTGGCCCTATCGGGCCCCTTTGTCTCATGAAAGAGACTCACAGGTTTaGGTTCGCAGGCACGAACTT +
Preference number: 4 (lower is better)
Translates to: GRSRPCGCWPYRAPLSHERDSQV*VRRHEL
Trigger: AAGTTCGTGCCTGCGAACCCAAACCTGTGAGTCTCT...TTCATGAGACAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGACCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AGGGACTGGCCAGAATGGAGGAAGAGCTGGAAAGACTCGTGGGCCTCAGTCCCTAGGCATCTTCCTCACTaGTGGAGTGAGGCACGAATC +
Preference number: 4 (lower is better)
Translates to: RDWPEWRKSWKDSWASVPRHLPH*WSEARI
Trigger: GATTCGTGCCTCACTCCACCAGTGAGGAAGATGCCT...AGGGACTGAGGCCCACGAGTCTTTCCAGCTCTTCCTCCATTCTGGCCAGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 72 bp GCTGGTGAAACCCCTGTCCCTCGTCCCTCCTCCACTTaGCAAAACGGAGCCTCCTTTCTCTTGGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: AGETPVPRPSST*QNGASFLLEAR
Trigger: TCTGGCTTCCAAGAGAAAGGAGGCTCCGTTTTGCAAAGTGGAGGAGGGACGAGGGACAGGGGTTTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp AGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAAAAAGTCCGGAGAAGGGTaGAAACGGAGGAGGGGTAAT +
Preference number: 4 (lower is better)
Translates to: SLAHLHQALIPHLMAGSKKSGEG*KRRRGN
Trigger: ATTACCCCTCCTCCGTTTTCACCCTTCTCCGGACTT...TTTGCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp CACTTTAGTGGTTTTAAAAACACAGACAGTACAAGGCCCAGGTTGCTGGCTGGTGCCAGGTGCACGCAGTaGGCGGAGGCCGGAGAAACC +
Preference number: 4 (lower is better)
Translates to: HFSGFKNTDSTRPRLLAGARCTQ*AEAGET
Trigger: GGTTTCTCCGGCCTCCGCTCACTGCGTGCACCTGGC...ACCAGCCAGCAACCTGGGCCTTGTACTGTCTGTGTTTTTAAAACCACTAAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGTCGAAGGTGTGGCACTaGAAGTCCCCGTCAACGTAC +
Preference number: 4 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGESKVWH*KSPSTY
Trigger: GTACGTTGACGGGGACTTTCAGTGCCACACCTTCGA...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp TGTTCCTCCCCACATCGACTCTGGCCGGAACCATCCATCTTACTGTTCTCCTGCAGTTCCATGTGTCCATaGAGGCCCAGCTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CSSPHRLWPEPSILLFSCSSMCP*RPSFSG
Trigger: CCCAGAGAAGCTGGGCCTTCATGGACACATGGAACT...GCAGGAGAACAGTAAGATGGATGGTTCCGGCCAGAGTCGATGTGGGGAGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGCTTAGAGCTCTTCTCTaGGGTTCCCATTCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGELRALL*GSHSGP
Trigger: CGGCCCAGAATGGGAACCTCAGAGAAGAGCTCTAAG...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp TGTTCCTCCCCACATCGACTCTGGCCGGAACCATCCATCTTACTGTTCTCCTGCCTGGCTTTGAGCTCCTaGAGGGAAGCCTCCATGTGT +
Preference number: 4 (lower is better)
Translates to: CSSPHRLWPEPSILLFSCLALSS*REASMC
Trigger: ACACATGGAGGCTTCCCTGCAGGAGCTCAAAGCCAG...GCAGGAGAACAGTAAGATGGATGGTTCCGGCCAGAGTCGATGTGGGGAGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp AAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGCCACGCACCAGCAGATaGCACGTTTGCGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: KEQSQGHPLVEEVIGEWEPRTSR*HVCGHG
Trigger: CCCGTGGCCGCAAACGTGGCATCTGCTGGTGCGTGG...CTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp AGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAAAGCTCACGGGAAACTCTaGCTCGAGGCAGGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: SLAHLHQALIPHLMAGSKAHGKL*LEAGKN
Trigger: ATTTTTGCCTGCCTCGAGGCAGAGTTTCCCGTGAGC...TTTGCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp GGCAGGTCAAGGCCTTGTGGCTGCTGGCCCTATCGGGCCCCTTTGTCTCATGAACTGCAGCCGAGAGGGTaGGAGAAAATGTTGAAATCA +
Preference number: 4 (lower is better)
Translates to: GRSRPCGCWPYRAPLSHELQPRG*EKMLKS
Trigger: TGATTTCAACATTTTCTCCCACCCTCTCGGCTGCAG...TTCATGAGACAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGACCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CACAGGTTTGGGTTCGCAGGCACGAACTTTGGAAACCGGAAGAGTCTGGCGCACCCGACAAACTTGGACTaGGTCAGCTTCTTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: HRFGFAGTNFGNRKSLAHPTNLD*VSFFLR
Trigger: CCGCAGAAAGAAGCTGACCCAGTCCAAGTTTGTCGG...GTGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AGGGACTGGCCAGAATGGAGGAAGAGCTGGAAAGACTCGTGGGCCTCAGTCCCTAACGTACTCCATGCCTaGCAGCTTCATCCCGTACTT +
Preference number: 4 (lower is better)
Translates to: RDWPEWRKSWKDSWASVPNVLHA*QLHPVL
Trigger: AAGTACGGGATGAAGCTGCCAGGCATGGAGTACGTT...AGGGACTGAGGCCCACGAGTCTTTCCAGCTCTTCCTCCATTCTGGCCAGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CTGCATCTAAACCTTTTTGCCACCATCTCCCTCTGCCATCTCTTACTTCAGTCTTGCACCACGGAGGGCTaGCCTCTGCCTGGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: LHLNLFATISLCHLLLQSCTTEG*PLPGSV
Trigger: CACCGAGCCAGGCAGAGGCCAGCCCTCCGTGGTGCA...AGACTGAAGTAAGAGATGGCAGAGGGAGATGGTGGCAAAAAGGTTTAGATGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTAGCTGGAAAGACTCGTaGGCCTCAGTCCCTCATTGC +
Preference number: 4 (lower is better)
Translates to: LWKPEESGALTPGSNPPPSWKDS*ASVPHC
Trigger: GCAATGAGGGACTGAGGCCCACGAGTCTTTCCAGCT...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAAAGAATGGAGGAAGAGCTaGAAAGACTCGTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SLAHLHQALIPHLMAGSKEWRKS*KDSWAS
Trigger: TGAGGCCCACGAGTCTTTCCAGCTCTTCCTCCATTC...TTTGCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTCCCCAAATTCGTTGTTaGAGGCGGTCTCCGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LWKPEESGALTPGSNPPPPQIRC*RRSPLC
Trigger: ACACAGCGGAGACCGCCTCCAACAACGAATTTGGGG...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CTCACTGGTGGAGTGAGGCACGAATCTAAAGGGGATGGGAAGACCTTCTGTGGGCGCAGGCACGAACTTTaGAAACCGGAAGAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LTGGVRHESKGDGKTFCGRRHEL*KPEESG
Trigger: GCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCG...CCCACAGAAGGTCTTCCCATCCCCTTTAGATTCGTGCCTCACTCCACCAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGTTTCGGAGGATCTCCCCACCCTaGGCTCAGCCAGAACTCCCA +
Preference number: 4 (lower is better)
Translates to: QSQGHPLVEEVIGEWEFRRISPP*AQPELP
Trigger: TGGGAGTTCTGGCTGAGCCCAGGGTGGGGAGATCCT...CCGAAACTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGTTTCGGCCTCACACCCTGCCATaGGGGAAGAGGTGCCGTCTT +
Preference number: 4 (lower is better)
Translates to: QSQGHPLVEEVIGEWEFRPHTLP*GKRCRL
Trigger: AAGACGGCACCTCTTCCCCCATGGCAGGGTGTGAGG...CCGAAACTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AGGGACTGGCCAGAATGGAGGAAGAGCTGGAAAGACTCGTGGGCCTCAGTCCCTTTAGATTCGGAGCCATaGATAGTCCGGAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RDWPEWRKSWKDSWASVPLDSEP*IVRSPR
Trigger: CCTTGGACTCCGGACTATCCATGGCTCCGAATCTAA...AGGGACTGAGGCCCACGAGTCTTTCCAGCTCTTCCTCCATTCTGGCCAGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp GATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCGGGAGGCCAGCCCTGTaGGGGTACCATGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: DIFSLKEQSQGHPLVEEVGRPAL*GYHGGH
Trigger: GTGGCCTCCATGGTACCCCCACAGGGCTGGCCTCCC...GACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CACTTTAGTGGTTTTAAAAACACAGACAGTACAAGGCCCAGGTTGCTGGCTGGTCGGGGACTGGTGGAGTaGGGTGAGCGGGCACAGGGA +
Preference number: 4 (lower is better)
Translates to: HFSGFKNTDSTRPRLLAGRGLVE*GERAQG
Trigger: TCCCTGTGCCCGCTCACCCCACTCCACCAGTCCCCG...ACCAGCCAGCAACCTGGGCCTTGTACTGTCTGTGTTTTTAAAACCACTAAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGAGAGGAGACTCCGGCTaGCGACCGGGGACTGGTGGA +
Preference number: 4 (lower is better)
Translates to: KEQSQGHPLVEEVIGEWERGDSG*RPGTGG
Trigger: TCCACCAGTCCCCGGTCGCCAGCCGGAGTCTCCTCT...CTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 72 bp CAGCCTGGAGTCAAAGAGACCAGACCCCTGCTTAGATaGCCATACTCGCACCATTCCAAACCTGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: QPGVKETRPLLR*PYSHHSKPASL
Trigger: GAGGGAGGCAGGTTTGGAATGGTGCGAGTATGGCAATCTAAGCAGGGGTCTGGTCTCTTTGACTCCAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp GTTGCCATTTTCGAAGTTGAGCCCTTGCTAGAGATTCCGAGGTCCTCAGTTTCCGGTAGCTCTTTTCGTTaGGGCAAACCCCGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: VAIFEVEPLLEIPRSSVSGSSFR*GKPRGR
Trigger: ACGGCCGCGGGGTTTGCCTCAACGAAAAGAGCTACC...GGAAACTGAGGACCTCGGAATCTCTAGCAAGGGCTCAACTTCGAAAATGGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGGTGTCCGGAGACTGTaGCTTCCTGAGGGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: LWKPEESGALTPGSNPPPGVRRL*LPEGLK
Trigger: CTTTAAACCCTCAGGAAGTCACAGTCTCCGGACACC...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGTCCCTCATTGCAGGCTaGAGGTGGGCAGCGGAGCAC +
Preference number: 4 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVSLIAG*RWAAEH
Trigger: GTGCTCCGCTGCCCACCTTCAGCCTGCAATGAGGGA...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp TGTTCCTCCCCACATCGACTCTGGCCGGAACCATCCATCTTACTGTTCTCCTGCGGGTGGAAAGAACAGTaGCGTGGAAGAGGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: CSSPHRLWPEPSILLFSCGWKEQ*RGRGLG
Trigger: TCCCAAACCTCTTCCACGTCACTGTTCTTTCCACCC...GCAGGAGAACAGTAAGATGGATGGTTCCGGCCAGAGTCGATGTGGGGAGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp CAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGTTTCGGTCCAAGGTCTCTGGGTaGGCAGACAGTCGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: QSQGHPLVEEVIGEWEFRSKVSG*ADSRPK
Trigger: CTTTGGCCGACTGTCTGCTCACCCAGAGACCTTGGA...CCGAAACTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGGTGGTGGGCTCCTCGTaGTCACGGGAGTCTCTCTCG +
Preference number: 4 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVVVGSS*SRESLS
Trigger: CGAGAGAGACTCCCGTGAGCACGAGGAGCCCACCAC...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp TGTTCCTCCCCACATCGACTCTGGCCGGAACCATCCATCTTACTGTTCTCCTGCCTCCCCCACAGAGGCTaGTGCGCTACTTACAAATTG +
Preference number: 4 (lower is better)
Translates to: CSSPHRLWPEPSILLFSCLPHRG*CATYKL
Trigger: CAATTTGTAAGTAGCGCAGCAGCCTCTGTGGGGGAG...GCAGGAGAACAGTAAGATGGATGGTTCCGGCCAGAGTCGATGTGGGGAGGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGCCCTTTACCTCGGGGTaGGGCAGGAGAGCGAGAGTG +
Preference number: 4 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVPFTSG*GRRARV
Trigger: CACTCTCGCTCTCCTGCCCCACCCCGAGGTAAAGGG...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGGAGATGATCCGGGGGTaGGCAGTGTTCTCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVEMIRG*AVFSAP
Trigger: GGGAGCCGAGAACACTGCCCACCCCCGGATCATCTC...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAAAAAGACTAAAATGGGATaGACTGAGGCGCGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SLAHLHQALIPHLMAGSKKTKMG*TEARAV
Trigger: CACAGCACGCGCCTCAGTCCATCCCATTTTAGTCTT...TTTGCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGAGGGACTGGCCAGAATaGAGGAAGAGCTGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGERDWPE*RKSWKD
Trigger: GTCTTTCCAGCTCTTCCTCCATTCTGGCCAGTCCCT...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGTTTCGGGGCCAAAGGCCAGCCTaGAGTCAAAGAGACCAGACC +
Preference number: 4 (lower is better)
Translates to: QSQGHPLVEEVIGEWEFRGQRPA*SQRDQT
Trigger: GGTCTGGTCTCTTTGACTCCAGGCTGGCCTTTGGCC...CCGAAACTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 72 bp AAGAGACTCACAGGTTTGGGTTCGCAGGCACGAACTTaGGAAACCGGAAGAGTCTGGCGCACTTACACCAGG +
Preference number: 4 (lower is better)
Translates to: KRLTGLGSQART*ETGRVWRTYTR
Trigger: CCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTGAGTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp CACAGGTTTGGGTTCGCAGGCACGAACTTTGGAAACCGGAAGAGTCTGGCGCACCAGACATATCCTCTCTaGCGCTATGGGGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: HRFGFAGTNFGNRKSLAHQTYPL*RYGVSS
Trigger: AGAAGAAACCCCATAGCGTCAGAGAGGATATGTCTG...GTGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp CAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGTTTCGGGCGGTCCTTCTTCACTaGTTCAGCCTTCAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: QSQGHPLVEEVIGEWEFRAVLLH*FSLQLG
Trigger: TCCGAGCTGAAGGCTGAAGCAGTGAAGAAGGACCGC...CCGAAACTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGGCCTCAGTCCCTCATTaGAGGCTGAAGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVASVPH*RLKVGS
Trigger: GCTGCCCACCTTCAGCCTGCAATGAGGGACTGAGGC...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTCCCAGGAGAAACTCCTaGATGCAGAAGAGACTCACA +
Preference number: 4 (lower is better)
Translates to: LWKPEESGALTPGSNPPPPRRNS*MQKRLT
Trigger: TGTGAGTCTCTTCTGCATGCAGGAGTTTCTCCTGGG...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp AAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGGCCGTCTTCCTCCAGTaGCTCCCTTCCCAGGATCTC +
Preference number: 4 (lower is better)
Translates to: KEQSQGHPLVEEVIGEWEAVFLQ*LPSQDL
Trigger: GAGATCCTGGGAAGGGAGGCACTGGAGGAAGACGGC...CTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGACAGGTAAGAGGCGTTaGCTGCAGCCGAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: KEQSQGHPLVEEVIGEWETGKRR*LQPRGW
Trigger: CCACCCTCTCGGCTGCAGCCAACGCCTCTTACCTGT...CTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGAGTTGGGCCCCTGCCTaGTCTCGGTGCATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: KEQSQGHPLVEEVIGEWESWAPA*SRCMSF
Trigger: GAAGGACATGCACCGAGACCAGGCAGGGGCCCAACT...CTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTAGCTGTCCATACTGCTaGCTAGAGGAGGAGACAGAT +
Preference number: 4 (lower is better)
Translates to: LWKPEESGALTPGSNPPPSCPYC*LEEETD
Trigger: ATCTGTCTCCTCCTCTAGCCAGCAGTATGGACAGCT...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CACAGGTTTGGGTTCGCAGGCACGAACTTTGGAAACCGGAAGAGTCTGGCGCACGATGCAAAGGGAGAATaGGTGGAAAGAACAGTGACG +
Preference number: 4 (lower is better)
Translates to: HRFGFAGTNFGNRKSLAHDAKGE*VERTVT
Trigger: CGTCACTGTTCTTTCCACCCATTCTCCCTTTGCATC...GTGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp GTTGCCATTTTCGAAGTTGAGCCCTTGCTAGAGATTCCGAGGTCCTCAGTTTCCAAGGAGGGTCAGTCCTaGCTGGGCTTCCCTATCTCC +
Preference number: 4 (lower is better)
Translates to: VAIFEVEPLLEIPRSSVSKEGQS*LGFPIS
Trigger: GGAGATAGGGAAGCCCAGCCAGGACTGACCCTCCTT...GGAAACTGAGGACCTCGGAATCTCTAGCAAGGGCTCAACTTCGAAAATGGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 72 bp CTGACCAATCCATCCTGGGAAACCCCAATAGTGTCATaGATTGCCACATCCTGGGCTGCATCTTCTAGCGCC +
Preference number: 4 (lower is better)
Translates to: LTNPSWETPIVS*IATSWAASSSA
Trigger: GGCGCTAGAAGATGCAGCCCAGGATGTGGCAATCAATGACACTATTGGGGTTTCCCAGGATGGATTGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 72 bp GCTTTTTCGCTATTCCTCTTCGTAGCCCCAAATTCGTaGTTGGAGGCGGTCTCCGCTGTGTCATGCCATGAG +
Preference number: 4 (lower is better)
Translates to: AFSLFLFVAPNS*LEAVSAVSCHE
Trigger: CTCATGGCATGACACAGCGGAGACCGCCTCCAACAACGAATTTGGGGCTACGAAGAGGAATAGCGAAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTAGACATACAGAAACGTaGGTTGGGTTTAGGGGACAG +
Preference number: 4 (lower is better)
Translates to: LWKPEESGALTPGSNPPPRHTET*VGFRGQ
Trigger: CTGTCCCCTAAACCCAACTCACGTTTCTGTATGTCT...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTCCTCCCCCAGACACTTaGAAAAATGTAGAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LWKPEESGALTPGSNPPPPPPDT*KNVERG
Trigger: ACCTCTCTCTACATTTTTGCAAGTGTCTGGGGGAGG...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp GATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCCCTTCAGCTCGGAGATaGGGGTGTGTTTGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: DIFSLKEQSQGHPLVEEVPSARR*GCVWAG
Trigger: TCCGGCCCAAACACACCCGCATCTCCGAGCTGAAGG...GACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp CTCACTGGTGGAGTGAGGCACGAATCTAAAGGGGATGGGAAGACCTTCTGTGGGCCCCACAGAGGCTGCTaGGCTACTTACAAATTGAAT +
Preference number: 4 (lower is better)
Translates to: LTGGVRHESKGDGKTFCGPHRGC*ATYKLN
Trigger: ATTCAATTTGTAAGTAGCGCAGCAGCCTCTGTGGGG...CCCACAGAAGGTCTTCCCATCCCCTTTAGATTCGTGCCTCACTCCACCAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp AGACCCCTGCTTAGATTGCCATACTCGCACCATTCCAAACCTGCCTCCCTCACAAAGAGACCAGACCCCTaGTTAGATTGCCATACTCGC +
Preference number: 4 (lower is better)
Translates to: RPLLRLPYSHHSKPASLTKRPDP*LDCHTR
Trigger: GCGAGTATGGCAATCTAAGCAGGGGTCTGGTCTCTT...TGTGAGGGAGGCAGGTTTGGAATGGTGCGAGTATGGCAATCTAAGCAGGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp ATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCACCATCTCAGAGGTGGTaGGCTCCTCGTGCTCACGGG +
Preference number: 4 (lower is better)
Translates to: ISSALKNSHKATHWLRKSPSQRW*APRAHG
Trigger: CCCGTGAGCACGAGGAGCCCACCACCTCTGAGATGG...TGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGCTGACCAATCCATCCTaGGAAACCCCAATAGTGTCA +
Preference number: 4 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGELTNPS*ETPIVS
Trigger: TGACACTATTGGGGTTTCCCAGGATGGATTGGTCAG...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AGACCCCTGCTTAGATTGCCATACTCGCACCATTCCAAACCTGCCTCCCTCACAATCCGGGAGAGGTCCTaGAGTGTTTTGCCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: RPLLRLPYSHHSKPASLTIRERS*SVLPFP
Trigger: AGGAAAAGGCAAAACACTCCAGGACCTCTCCCGGAT...TGTGAGGGAGGCAGGTTTGGAATGGTGCGAGTATGGCAATCTAAGCAGGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp TGTTCCTCCCCACATCGACTCTGGCCGGAACCATCCATCTTACTGTTCTCCTGCGCAGATGAACACACGTaGGGAATCACTGTCAAATCC +
Preference number: 4 (lower is better)
Translates to: CSSPHRLWPEPSILLFSCADEHT*GITVKS
Trigger: GGATTTGACAGTGATTCCCCACGTGTGTTCATCTGC...GCAGGAGAACAGTAAGATGGATGGTTCCGGCCAGAGTCGATGTGGGGAGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGCCAAGCCCCCTTTCCTaGATATCTTCAGCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGEPSPLS*ISSALK
Trigger: CTTTAAGGCTGAAGATATCCAGGAAAGGGGGCTTGG...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CTCACTGGTGGAGTGAGGCACGAATCTAAAGGGGATGGGAAGACCTTCTGTGGGGACGTGGAAGAGGTTTaGGATACTGGCCTAAGACAT +
Preference number: 4 (lower is better)
Translates to: LTGGVRHESKGDGKTFCGDVEEV*DTGLRH
Trigger: ATGTCTTAGGCCAGTATCCCAAACCTCTTCCACGTC...CCCACAGAAGGTCTTCCCATCCCCTTTAGATTCGTGCCTCACTCCACCAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CTGCATCTAAACCTTTTTGCCACCATCTCCCTCTGCCATCTCTTACTTCAGTCTCTGAGGTTCCCATTCTaGGCCGGAGCCCTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LHLNLFATISLCHLLLQSLRFPF*AGALSG
Trigger: TCCTGAGAGGGCTCCGGCCCAGAATGGGAACCTCAG...AGACTGAAGTAAGAGATGGCAGAGGGAGATGGTGGCAAAAAGGTTTAGATGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGATGGCCAGTTTAGACTaGTTCTTCCTATCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGEMASLD*FFLSGF
Trigger: GAAGCCAGATAGGAAGAATCAGTCTAAACTGGCCAT...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp TGTTCCTCCCCACATCGACTCTGGCCGGAACCATCCATCTTACTGTTCTCCTGCCTAGCTCTTTTCCCCTaGAGAAGTTTCCAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: CSSPHRLWPEPSILLFSCLALFP*RSFQRD
Trigger: GTCTCTTTGGAAACTTCTGCAGGGGAAAAGAGCTAG...GCAGGAGAACAGTAAGATGGATGGTTCCGGCCAGAGTCGATGTGGGGAGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTCAAGAATTAAAGCCTTaGAACAGGTTGGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LWKPEESGALTPGSNPPPQELKP*NRLGEA
Trigger: TGCTTCCCCCAACCTGTTGCAAGGCTTTAATTCTTG...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGCTGTCTCATCTCAGGTaGAGAGATGATCCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVLSHLR*RDDPGV
Trigger: CACCCCCGGATCATCTCTGCACCTGAGATGAGACAG...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp TGTGCAGAGAGATGGGGCATGCTGACTCGGCAGGTCAAGGCCTTGTGGCTGCTGAGCTCATTTCTATTTTaGAACCCATTCCCCCATTTT +
Preference number: 4 (lower is better)
Translates to: CAERWGMLTRQVKALWLLSSFLF*NPFPHF
Trigger: AAAATGGGGGAATGGGTTGCAAAATAGAAATGAGCT...CAGCAGCCACAAGGCCTTGACCTGCCGAGTCAGCATGCCCCATCTCTCTGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CACTTTAGTGGTTTTAAAAACACAGACAGTACAAGGCCCAGGTTGCTGGCTGGTCTCTGCCTGGCTCGGTaGGTGCAGATGAACACACGT +
Preference number: 4 (lower is better)
Translates to: HFSGFKNTDSTRPRLLAGLCLAR*VQMNTR
Trigger: ACGTGTGTTCATCTGCACCCACCGAGCCAGGCAGAG...ACCAGCCAGCAACCTGGGCCTTGTACTGTCTGTGTTTTTAAAACCACTAAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGTGGGCTCATGTGGTGTaGTGTCCGGAGACTGTGACT +
Preference number: 4 (lower is better)
Translates to: KEQSQGHPLVEEVIGEWEWAHVV*CPETVT
Trigger: AGTCACAGTCTCCGGACACCACACCACATGAGCCCA...CTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGAGGAAAAGGCTGGGGTaGGACTGGTGGATCCATCGT +
Preference number: 4 (lower is better)
Translates to: KEQSQGHPLVEEVIGEWERKRLG*DWWIHR
Trigger: ACGATGGATCCACCAGTCCCACCCCAGCCTTTTCCT...CTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CTGCATCTAAACCTTTTTGCCACCATCTCCCTCTGCCATCTCTTACTTCAGTCTGGAGGATGCAGGGACTaGCCAGAATGGAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LHLNLFATISLCHLLLQSGGCRD*PEWRKS
Trigger: GCTCTTCCTCCATTCTGGCCAGTCCCTGCATCCTCC...AGACTGAAGTAAGAGATGGCAGAGGGAGATGGTGGCAAAAAGGTTTAGATGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGGAAGTCATTGGAGAATaGGAGTTTCGGAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGEEVIGE*EFRNLA
Trigger: AGCCAGATTCCGAAACTCCCATTCTCCAATGACTTC...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 72 bp TTTTCGCTATTCCTCTTCGTAGCCCCAAATTCGTTGTaGGAGGCGGTCTCCGCTGTGTCATGCCATGAGCAA +
Preference number: 4 (lower is better)
Translates to: FSLFLFVAPNSL*EAVSAVSCHEQ
Trigger: TTGCTCATGGCATGACACAGCGGAGACCGCCTCCAACAACGAATTTGGGGCTACGAAGAGGAATAGCGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 72 bp AGGAGAAACTCCTGCATGCAGAAGAGACTCACAGGTTaGGGTTCGCAGGCACGAACTTTGGAAACCGGAAGA +
Preference number: 4 (lower is better)
Translates to: RRNSCMQKRLTG*GSQARTLETGR
Trigger: TCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTGAGTCTCTTCTGCATGCAGGAGTTTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp GTTGCCATTTTCGAAGTTGAGCCCTTGCTAGAGATTCCGAGGTCCTCAGTTTCCAGAAACCCTCAAGCCTaGGCGGGTCAGAATTATAGG +
Preference number: 4 (lower is better)
Translates to: VAIFEVEPLLEIPRSSVSRNPQA*AGQNYR
Trigger: CCTATAATTCTGACCCGCTCAGGCTTGAGGGTTTCT...GGAAACTGAGGACCTCGGAATCTCTAGCAAGGGCTCAACTTCGAAAATGGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGGCCATGAGCAAAGAGTaGAGAGAGCTGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVAMSKE*RELCPQ
Trigger: CTGTGGACACAGCTCTCTTCACTCTTTGCTCATGGC...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp GATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCTCCTCACTGGTGGAGTaGGGCACGAATCTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: DIFSLKEQSQGHPLVEEVSSLVE*GTNLKG
Trigger: CCCCTTTAGATTCGTGCCTCACTCCACCAGTGAGGA...GACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGTCTTTTCTCCCACTTTaGCACCTCCTCTTCGAAATT +
Preference number: 4 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGESFLPL*HLLFEI
Trigger: AATTTCGAAGAGGAGGTGGCAAAGTGGGAGAAAAGA...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp GTTGCCATTTTCGAAGTTGAGCCCTTGCTAGAGATTCCGAGGTCCTCAGTTTCCGGCCACGGGAAGGTTTaGACTGCTTTCTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: VAIFEVEPLLEIPRSSVSGHGKV*TAFSCR
Trigger: TCTACAAGAGAAAGCAGTGCAAACCTTCCCGTGGCC...GGAAACTGAGGACCTCGGAATCTCTAGCAAGGGCTCAACTTCGAAAATGGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp AAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGCAAGGGGCAGAAGCCTaGTCAAAGTCCAGACACAGT +
Preference number: 4 (lower is better)
Translates to: KEQSQGHPLVEEVIGEWEQGAEA*SKSRHS
Trigger: ACTGTGTCTGGACTTTGAGCAGGCTTCTGCCCCTTG...CTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp GTTGCCATTTTCGAAGTTGAGCCCTTGCTAGAGATTCCGAGGTCCTCAGTTTCCGACCCCTGCTTAGATTaGCATACTCGCACCATTCCA +
Preference number: 4 (lower is better)
Translates to: VAIFEVEPLLEIPRSSVSDPCLD*HTRTIP
Trigger: TGGAATGGTGCGAGTATGGCAATCTAAGCAGGGGTC...GGAAACTGAGGACCTCGGAATCTCTAGCAAGGGCTCAACTTCGAAAATGGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp AAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGCTCCCCCGACAAACTTaGACTGGGTCAGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: KEQSQGHPLVEEVIGEWELPRQT*TGSASF
Trigger: GAAAGAAGCTGACCCAGTCCAAGTTTGTCGGGGGAG...CTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CTGCATCTAAACCTTTTTGCCACCATCTCCCTCTGCCATCTCTTACTTCAGTCTCTTTGCGGTCACAATTaGGCAGGTACACAGCACGGG +
Preference number: 4 (lower is better)
Translates to: LHLNLFATISLCHLLLQSLCGHN*AGTQHG
Trigger: CCCGTGCTGTGTACCTGCCCAATTGTGACCGCAAAG...AGACTGAAGTAAGAGATGGCAGAGGGAGATGGTGGCAAAAAGGTTTAGATGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGTTTCGGCCTGGCTCTGCGGCCTaGATTAAGCTCATTTCTATT +
Preference number: 4 (lower is better)
Translates to: QSQGHPLVEEVIGEWEFRPGSAA*IKLISI
Trigger: AATAGAAATGAGCTTAATCCAGGCCGCAGAGCCAGG...CCGAAACTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTCTGATTCTTCCTATCTaGCTTCTAAAGTCTAGCACC +
Preference number: 4 (lower is better)
Translates to: LWKPEESGALTPGSNPPPLILPI*LLKSST
Trigger: GGTGCTAGACTTTAGAAGCCAGATAGGAAGAATCAG...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CTCACTGGTGGAGTGAGGCACGAATCTAAAGGGGATGGGAAGACCTTCTGTGGGTTGGCAGATCCTAGTTaGATAACTGCTCAAGATGCA +
Preference number: 4 (lower is better)
Translates to: LTGGVRHESKGDGKTFCGLADPS*ITAQDA
Trigger: TGCATCTTGAGCAGTTATCCAACTAGGATCTGCCAA...CCCACAGAAGGTCTTCCCATCCCCTTTAGATTCGTGCCTCACTCCACCAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp GATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCGGCTTCCCTATCTCCTaGCAGTCGTGGGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: DIFSLKEQSQGHPLVEEVGFPIS*QSWERQ
Trigger: CTGTCTTTCCCACGACTGCCAGGAGATAGGGAAGCC...GACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGTCAGTTTTCCCAGAATaGGGAAGCTCCTCAATGCCC +
Preference number: 4 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVSVFPE*GSSSMP
Trigger: GGGCATTGAGGAGCTTCCTCATTCTGGGAAAACTGA...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp ATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCACTTCAGTCTCCCTCCTaGTCTGCCAGCATGGAGAGT +
Preference number: 4 (lower is better)
Translates to: ISSALKNSHKATHWLRKSLQSPS*SASMES
Trigger: ACTCTCCATGCTGGCAGAGCAGGAGGGAGACTGAAG...TGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGTTTCGGAGATGGCGTTGGGGGTaGGAGAGAAAAATGGATTTA +
Preference number: 4 (lower is better)
Translates to: QSQGHPLVEEVIGEWEFRRWRWG*ERKMDL
Trigger: TAAATCCATTTTTCTCTCCCACCCCCAACGCCATCT...CCGAAACTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp ATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCACCATCGTGGACCTGTTaGGCTCATGTGGTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: ISSALKNSHKATHWLRKSPSWTC*AHVVWC
Trigger: ACACCACACCACATGAGCCCAACAGGTCCACGATGG...TGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CACTTTAGTGGTTTTAAAAACACAGACAGTACAAGGCCCAGGTTGCTGGCTGGTGTGCCAAAGCTAGAATaGAACAGTCAGCCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: HFSGFKNTDSTRPRLLAGVPKLE*NSQPPL
Trigger: GAGAGGGGGCTGACTGTTCCATTCTAGCTTTGGCAC...ACCAGCCAGCAACCTGGGCCTTGTACTGTCTGTGTTTTTAAAACCACTAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 72 bp AAACAACCGGTAGGCAACTCGGAATCTGAAGGAATCTaGTCTGACAACTGTGCTATCCATGTGGGCTACGGT +
Preference number: 4 (lower is better)
Translates to: KQPVGNSESEGI*SDNCAIHVGYG
Trigger: ACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTCCGAGTTGCCTACCGGTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGTGCCATTTTCGAAGTTaGGCCCTTGCTAGAGATTCC +
Preference number: 4 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVCHFRS*ALARDS
Trigger: GGAATCTCTAGCAAGGGCTCAACTTCGAAAATGGCA...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp GATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCGGCCCCTTTGTCTCATaGAGATTGAGCACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: DIFSLKEQSQGHPLVEEVGPFVS*RLSTSP
Trigger: AGGAGAAGTGCTCAATCTTCATGAGACAAAGGGGCC...GACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGAATAATGAGATCGGATaGAGTGGAGATGGCGTTGGG +
Preference number: 4 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVNNEIG*SGDGVG
Trigger: CCCAACGCCATCTCCACTGCATCCGATCTCATTATT...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp CTGCATCTAAACCTTTTTGCCACCATCTCCCTCTGCCATCTCTTACTTCAGTCTATCACTCAACGTTGCTaGTGTCGAAGGTGTGGCACT +
Preference number: 4 (lower is better)
Translates to: LHLNLFATISLCHLLLQSITQRC*CRRCGT
Trigger: AGTGCCACACCTTCGACAGCAGCAACGTTGAGTGAT...AGACTGAAGTAAGAGATGGCAGAGGGAGATGGTGGCAAAAAGGTTTAGATGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp GATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCGCCACCATCTCCCTCTaGCATCTCTTACTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: DIFSLKEQSQGHPLVEEVATISL*HLLLQS
Trigger: AGACTGAAGTAAGAGATGGCAGAGGGAGATGGTGGC...GACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGGCATCTAAACCTTTTTaGCACCATCTCCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVASKPF*HHLPLP
Trigger: TGGCAGAGGGAGATGGTGGCAAAAAGGTTTAGATGC...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGGCTTTTCCCCCTTTCTaGTGCTTTGTGCCAAAGCTA +
Preference number: 4 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVAFPPF*CFVPKL
Trigger: TAGCTTTGGCACAAAGCAGCAGAAAGGGGGAAAAGC...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp CACTTTAGTGGTTTTAAAAACACAGACAGTACAAGGCCCAGGTTGCTGGCTGGTGAATCATGCGTTCCCTaGTTGTCCCAGCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: HFSGFKNTDSTRPRLLAGESCVP*LSQLSF
Trigger: GAAGGAAAGCTGGGACAAGCAGGGAACGCATGATTC...ACCAGCCAGCAACCTGGGCCTTGTACTGTCTGTGTTTTTAAAACCACTAAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CTGCATCTAAACCTTTTTGCCACCATCTCCCTCTGCCATCTCTTACTTCAGTCTCACAAGGCCACCCATTaGTTGAGGAAGTCATTGGAG +
Preference number: 4 (lower is better)
Translates to: LHLNLFATISLCHLLLQSHKATH*LRKSLE
Trigger: CTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTG...AGACTGAAGTAAGAGATGGCAGAGGGAGATGGTGGCAAAAAGGTTTAGATGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp CTGCATCTAAACCTTTTTGCCACCATCTCCCTCTGCCATCTCTTACTTCAGTCTGGAGCTTGTAGTTCCTaGCTCAGTCTTTTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LHLNLFATISLCHLLLQSGACSS*LSLFSG
Trigger: CCCTGAGAAAAGACTGAGCCAGGAACTACAAGCTCC...AGACTGAAGTAAGAGATGGCAGAGGGAGATGGTGGCAAAAAGGTTTAGATGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGGAGCCTCCTTTCTCTTaGAAGCCAGACATATCCTCT +
Preference number: 4 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVEPPFS*KPDISS
Trigger: AGAGGATATGTCTGGCTTCCAAGAGAAAGGAGGCTC...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp ATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCAAGGCCACCCATTGGTTaGGGAAGTCATTGGAGAATG +
Preference number: 4 (lower is better)
Translates to: ISSALKNSHKATHWLRKSRPPIG*GSHWRM
Trigger: CATTCTCCAATGACTTCCTCAACCAATGGGTGGCCT...TGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 72 bp TCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTaGAGGAAGTCATTGGAGAATGGGAGTTTCGGAATC +
Preference number: 4 (lower is better)
Translates to: SALKNSHKATHW*RKSLENGSFGI
Trigger: GATTCCGAAACTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 72 bp ATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATaGGTTGAGGAAGTCATTGGAGAATGGGAGTTTCGG +
Preference number: 4 (lower is better)
Translates to: IFSLKEQSQGHP*VEEVIGEWEFR
Trigger: CCGAAACTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp AAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGTGTCTGCCTGGGGAATaGAATATGCACATGTATTTC +
Preference number: 4 (lower is better)
Translates to: KEQSQGHPLVEEVIGEWECLPGE*NMHMYF
Trigger: GAAATACATGTGCATATTTCATTCCCCAGGCAGACA...CTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp ATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCAGAATTAAATGAGGGCTaGAACGGCACGCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: ISSALKNSHKATHWLRKSELNEG*NGTLQH
Trigger: ATGCTGAAGCGTGCCGTTTCAGCCCTCATTTAATTC...TGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR TCA 90 bp ATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGTCTCATGAAGATTaGGCACTTCTCCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ISSALKNSHKATHWLRKSLSHED*ALLLSP
Trigger: TGGGGACAGGAGAAGTGCTCAATCTTCATGAGACAA...TGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp CTGCATCTAAACCTTTTTGCCACCATCTCCCTCTGCCATCTCTTACTTCAGTCTGAGGAAGCTCCTCAATaGCCCTATAGGAACTACTTT +
Preference number: 4 (lower is better)
Translates to: LHLNLFATISLCHLLLQSEEAPQ*PYRNYF
Trigger: AAAGTAGTTCCTATAGGGGCATTGAGGAGCTTCCTC...AGACTGAAGTAAGAGATGGCAGAGGGAGATGGTGGCAAAAAGGTTTAGATGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp CTGCATCTAAACCTTTTTGCCACCATCTCCCTCTGCCATCTCTTACTTCAGTCTTTTCCCCCTTTCTGCTaGTTTGTGCCAAAGCTAGAA +
Preference number: 4 (lower is better)
Translates to: LHLNLFATISLCHLLLQSFPPFC*FVPKLE
Trigger: TTCTAGCTTTGGCACAAAGCAGCAGAAAGGGGGAAA...AGACTGAAGTAAGAGATGGCAGAGGGAGATGGTGGCAAAAAGGTTTAGATGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000233813.5
3UTR CAA 72 bp TGCATCTCTGTTGTTGCCATTTTCGAAGTTGAGCCCTaGCTAGAGATTCCGAGGTCCTCAGTTTCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: CISVVAIFEVEP*LEIPRSSVSSN
Trigger: ATTTGAGGAAACTGAGGACCTCGGAATCTCTAGCAAGGGCTCAACTTCGAAAATGGCAACAACAGAGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp ATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCAAATAGTGTCATTGATTaGCACATCCTGGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: ISSALKNSHKATHWLRKSNSVID*HILGCI
Trigger: GATGCAGCCCAGGATGTGGCAATCAATGACACTATT...TGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CCA 90 bp GATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCAGAGGTTTGGGATACTaGCCTAAGACATACAGAAAC +
Preference number: 4 (lower is better)
Translates to: DIFSLKEQSQGHPLVEEVRGLGY*PKTYRN
Trigger: GTTTCTGTATGTCTTAGGCCAGTATCCCAAACCTCT...GACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR GCA 90 bp GTTGCCATTTTCGAAGTTGAGCCCTTGCTAGAGATTCCGAGGTCCTCAGTTTCCTCTGTTCATCCAACTTaGCTCAAAAAGAAAACCATT +
Preference number: 4 (lower is better)
Translates to: VAIFEVEPLLEIPRSSVSSVHPT*LKKKTI
Trigger: AATGGTTTTCTTTTTGAGGCAAGTTGGATGAACAGA...GGAAACTGAGGACCTCGGAATCTCTAGCAAGGGCTCAACTTCGAAAATGGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS CCA 90 bp GGGAGTCTCTCTCTGCAGGAGAAGGAGCCGGAGGGTCAGCCCCCGTaGGCCAAGGTGCACACGGCCAGAGCCCAGGGCTGGGCAGTTTGG +
Preference number: 5 (lower is better)
Translates to: GSLSLQEKEPEGQPP*AKVHTARAQGWAVW
Trigger: CCAAACTGCCCAGCCCTGGGCTCTGGCCGTGTGCACCTTGGCCCACGGGGGCTGACCCTCCGGCTCCTTCTCCTGCAGAGAGAGACTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449583.1
CDS GCA 90 bp AGGTACACAGCACGGGGCACCATGCGTGGGCTGGCTTTGAGCTCCTaGAGGGAAGCCTCCATGTGTCTGCGGCAGGGGCCCTGCTCAGAC +
Preference number: 5 (lower is better)
Translates to: RYTARGTMRGLALSS*REASMCLRQGPCSD
Trigger: GTCTGAGCAGGGCCCCTGCCGCAGACACATGGAGGCTTCCCTGCAGGAGCTCAAAGCCAGCCCACGCATGGTGCCCCGTGCTGTGTACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS TCA 90 bp AATTGGGCAGGTACACAGCACGGGGCACCATGCGTGGGCTGGCTTTaGGCTCCTGCAGGGAAGCCTCCATGTGTCTGCGGCAGGGGCCCT +
Preference number: 5 (lower is better)
Translates to: NWAGTQHGAPCVGWL*APAGKPPCVCGRGP
Trigger: AGGGCCCCTGCCGCAGACACATGGAGGCTTCCCTGCAGGAGCTCAAAGCCAGCCCACGCATGGTGCCCCGTGCTGTGTACCTGCCCAATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS TCA 90 bp CTTGCAACAGGTTGGGGGAAGCAGGGCAGCGCCAGGTGCACGCAGTaGGCGGAGGCCGGAGAAACCCTCAAGCCTGAGCGGGTCAGAATT +
Preference number: 5 (lower is better)
Translates to: LATGWGKQGSARCTQ*AEAGETLKPERVRI
Trigger: AATTCTGACCCGCTCAGGCTTGAGGGTTTCTCCGGCCTCCGCTCACTGCGTGCACCTGGCGCTGCCCTGCTTCCCCCAACCTGTTGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp TGTTCCTCCCCACATCGACTCTGGCCGGAACCATCCATCTTACTGTTCTCCTGCCCGCAGCCCGGCTCCTaGACCAGCTCGCAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: CSSPHRLWPEPSILLFSCPQPGS*TSSQPR
Trigger: CCTGGGCTGCGAGCTGGTCAAGGAGCCGGGCTGCGG...GCAGGAGAACAGTAAGATGGATGGTTCCGGCCAGAGTCGATGTGGGGAGGAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS CCA 90 bp CAGCCTTCAGCTCGGAGATGCGGGTGTGTTTGGGCCGGAAGATCTTaGGGGAGTAGGTCTCCTCGGCCATCTCAGAGGTGGTGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: QPSARRCGCVWAGRS*GSRSPRPSQRWWAP
Trigger: AGGAGCCCACCACCTCTGAGATGGCCGAGGAGACCTACTCCCCCAAGATCTTCCGGCCCAAACACACCCGCATCTCCGAGCTGAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233813.5
ENST00000449583.1
ENST00000486341.1
CDS CCA 90 bp GCCGGAAGATCTTGGGGGAGTAGGTCTCCTCGGCCATCTCAGAGGTaGTGGGCTCCTCGTGCTCACGGGAGTCTCTCTCTGCAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: AGRSWGSRSPRPSQR*WAPRAHGSLSLQEK
Trigger: CTTCTCCTGCAGAGAGAGACTCCCGTGAGCACGAGGAGCCCACCACCTCTGAGATGGCCGAGGAGACCTACTCCCCCAAGATCTTCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449583.1
CDS CCA 90 bp TTTGCGGTCACAATTGGGCAGGTACACAGCACGGGGCACCATGCGTaGGCTGGCTTTGAGCTCCTGCAGGGAAGCCTCCATGTGTCTGCG +
Preference number: 5 (lower is better)
Translates to: FAVTIGQVHSTGHHA*AGFELLQGSLHVSA
Trigger: CGCAGACACATGGAGGCTTCCCTGCAGGAGCTCAAAGCCAGCCCACGCATGGTGCCCCGTGCTGTGTACCTGCCCAATTGTGACCGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS CCA 90 bp GGAAGATCTTGGGGGAGTAGGTCTCCTCGGCCATCTCAGAGGTGGTaGGCTCCTCGTGCTCACGGGAGTCTCTCTCTGCAGGAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: GRSWGSRSPRPSQRW*APRAHGSLSLQEKE
Trigger: CTCCTTCTCCTGCAGAGAGAGACTCCCGTGAGCACGAGGAGCCCACCACCTCTGAGATGGCCGAGGAGACCTACTCCCCCAAGATCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449583.1
CDS-3UTR CAA 90 bp CACAGGTTTGGGTTCGCAGGCACGAACTTTGGAAACCGGAAGAGTCTGGCGCACAAGCCTTGCAACAGGTaGGGGGAAGCAGGGCAGCGC +
Preference number: 5 (lower is better)
Translates to: HRFGFAGTNFGNRKSLAHKPCNR*GEAGQR
Trigger: GCGCTGCCCTGCTTCCCCCAACCTGTTGCAAGGCTT...GTGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp TGTTCCTCCCCACATCGACTCTGGCCGGAACCATCCATCTTACTGTTCTCCTGCCGGCAGGTCAAGGCCTaGTGGCTGCTGGCCCTATCG +
Preference number: 5 (lower is better)
Translates to: CSSPHRLWPEPSILLFSCRQVKA*WLLALS
Trigger: CGATAGGGCCAGCAGCCACAAGGCCTTGACCTGCCG...GCAGGAGAACAGTAAGATGGATGGTTCCGGCCAGAGTCGATGTGGGGAGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS CCA 90 bp CCTTCTTCACTGCTTCAGCCTTCAGCTCGGAGATGCGGGTGTGTTTaGGCCGGAAGATCTTGGGGGAGTAGGTCTCCTCGGCCATCTCAG +
Preference number: 5 (lower is better)
Translates to: PSSLLQPSARRCGCV*AGRSWGSRSPRPSQ
Trigger: CTGAGATGGCCGAGGAGACCTACTCCCCCAAGATCTTCCGGCCCAAACACACCCGCATCTCCGAGCTGAAGGCTGAAGCAGTGAAGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233813.5
ENST00000449583.1
ENST00000486341.1
CDS CCA 90 bp ATCCGGGGGTGGGCAGTGTTCTCGGCTCCCCCGACAAACTTGGACTaGGTCAGCTTCTTTCTGCGGTCCTTCTTCACTGCTTCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: IRGWAVFSAPPTNLD*VSFFLRSFFTASAF
Trigger: GAAGGCTGAAGCAGTGAAGAAGGACCGCAGAAAGAAGCTGACCCAGTCCAAGTTTGTCGGGGGAGCCGAGAACACTGCCCACCCCCGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233813.5
ENST00000449583.1
ENST00000486341.1
CDS CCA 90 bp GTCGAAGGTGTGGCACTGAAAGTCCCCGTCAACGTACTCCATGCCTaGCAGCTTCATCCCGTACTTGTCCACGCACCAGCAGATGCCACG +
Preference number: 5 (lower is better)
Translates to: VEGVALKVPVNVLHA*QLHPVLVHAPADAT
Trigger: CGTGGCATCTGCTGGTGCGTGGACAAGTACGGGATGAAGCTGCCAGGCATGGAGTACGTTGACGGGGACTTTCAGTGCCACACCTTCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp CTCACTGGTGGAGTGAGGCACGAATCTAAAGGGGATGGGAAGACCTTCTGTGGGATGCGTGGGCTGGCTTaGAGCTCCTGCAGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: LTGGVRHESKGDGKTFCGMRGLA*SSCREA
Trigger: GGCTTCCCTGCAGGAGCTCAAAGCCAGCCCACGCAT...CCCACAGAAGGTCTTCCCATCCCCTTTAGATTCGTGCCTCACTCCACCAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp GGCAGGTCAAGGCCTTGTGGCTGCTGGCCCTATCGGGCCCCTTTGTCTCATGAAAGCTTCATCCCGTACTaGTCCACGCACCAGCAGATG +
Preference number: 5 (lower is better)
Translates to: GRSRPCGCWPYRAPLSHESFIPY*STHQQM
Trigger: CATCTGCTGGTGCGTGGACAAGTACGGGATGAAGCT...TTCATGAGACAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGACCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp GGCAGGTCAAGGCCTTGTGGCTGCTGGCCCTATCGGGCCCCTTTGTCTCATGAAACGCATCACTCAACGTaGCTGCTGTCGAAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: GRSRPCGCWPYRAPLSHETHHST*LLSKVW
Trigger: CCACACCTTCGACAGCAGCAACGTTGAGTGATGCGT...TTCATGAGACAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGACCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGGCCTCAGTCCCTCATaGCAGGCTGAAGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: LWKPEESGALTPGSNPPPGLSPS*QAEGGQ
Trigger: CTGCCCACCTTCAGCCTGCAATGAGGGACTGAGGCC...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp AGACCCCTGCTTAGATTGCCATACTCGCACCATTCCAAACCTGCCTCCCTCACACACGAAGGGGTCTCCTaGGCCAGTGTCCAAGCCCCC +
Preference number: 5 (lower is better)
Translates to: RPLLRLPYSHHSKPASLTHEGVS*ASVQAP
Trigger: GGGGGCTTGGACACTGGCCAAGGAGACCCCTTCGTG...TGTGAGGGAGGCAGGTTTGGAATGGTGCGAGTATGGCAATCTAAGCAGGGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS GCA 90 bp CCATGCCTGGCAGCTTCATCCCGTACTTGTCCACGCACCAGCAGATaGCACGTTTGCGGCCACGGGAAGGTTTGCACTGCTTTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: PCLAASSRTCPRTSR*HVCGHGKVCTAFSC
Trigger: ACAAGAGAAAGCAGTGCAAACCTTCCCGTGGCCGCAAACGTGGCATCTGCTGGTGCGTGGACAAGTACGGGATGAAGCTGCCAGGCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS GCA 90 bp TGCTGTCGAAGGTGTGGCACTGAAAGTCCCCGTCAACGTACTCCATaGCTGGCAGCTTCATCCCGTACTTGTCCACGCACCAGCAGATGC +
Preference number: 5 (lower is better)
Translates to: CCRRCGTESPRQRTP*LAASSRTCPRTSRC
Trigger: GCATCTGCTGGTGCGTGGACAAGTACGGGATGAAGCTGCCAGGCATGGAGTACGTTGACGGGGACTTTCAGTGCCACACCTTCGACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS CCA 90 bp TCAGCTGCCAGCGGTGCGCGGCGCCGCAGAACAGGTAAGAGGCGTTaGCTGCAGCCGAGAGGGTGGGAGAAAATGTTGAAATCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: SAASGARRRRTGKRR*LQPRGWEKMLKSRN
Trigger: ATTTCTTGATTTCAACATTTTCTCCCACCCTCTCGGCTGCAGCCAACGCCTCTTACCTGTTCTGCGGCGCCGCGCACCGCTGGCAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTCAGCAGATGCCACGTTaGCGGCCACGGGAAGGTTTG +
Preference number: 5 (lower is better)
Translates to: LWKPEESGALTPGSNPPPQQMPR*RPREGL
Trigger: CAAACCTTCCCGTGGCCGCAAACGTGGCATCTGCTG...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS GCA 90 bp TCTTTCTGCGGTCCTTCTTCACTGCTTCAGCCTTCAGCTCGGAGATaGGGGTGTGTTTGGGCCGGAAGATCTTGGGGGAGTAGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: SFCGPSSLLQPSARR*GCVWAGRSWGSRSP
Trigger: AGGAGACCTACTCCCCCAAGATCTTCCGGCCCAAACACACCCGCATCTCCGAGCTGAAGGCTGAAGCAGTGAAGAAGGACCGCAGAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233813.5
ENST00000449583.1
ENST00000486341.1
CDS-3UTR CAA 90 bp CACAGGTTTGGGTTCGCAGGCACGAACTTTGGAAACCGGAAGAGTCTGGCGCACGCTCCCCCGACAAACTaGGACTGGGTCAGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: HRFGFAGTNFGNRKSLAHAPPTN*DWVSFF
Trigger: AAAGAAGCTGACCCAGTCCAAGTTTGTCGGGGGAGC...GTGCGCCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGAACCCAAACCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp GGCAGGTCAAGGCCTTGTGGCTGCTGGCCCTATCGGGCCCCTTTGTCTCATGAAACCCCAATAGTGTCATaGATTGCCACATCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: GRSRPCGCWPYRAPLSHETPIVS*IATSWA
Trigger: AGCCCAGGATGTGGCAATCAATGACACTATTGGGGT...TTCATGAGACAAAGGGGCCCGATAGGGCCAGCAGCCACAAGGCCTTGACCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp AAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAAGAGACTCACAGGTTaGGGTTCGCAGGCACGAACT +
Preference number: 5 (lower is better)
Translates to: KSLAHLHQALIPHLMAGSKRLTG*GSQART
Trigger: AGTTCGTGCCTGCGAACCCAAACCTGTGAGTCTCTT...GCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS GCA 90 bp GACAAACTTGGACTGGGTCAGCTTCTTTCTGCGGTCCTTCTTCACTaGTTCAGCCTTCAGCTCGGAGATGCGGGTGTGTTTGGGCCGGAA +
Preference number: 5 (lower is better)
Translates to: DKLGLGQLLSAVLLH*FSLQLGDAGVFGPE
Trigger: TTCCGGCCCAAACACACCCGCATCTCCGAGCTGAAGGCTGAAGCAGTGAAGAAGGACCGCAGAAAGAAGCTGACCCAGTCCAAGTTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233813.5
ENST00000449583.1
ENST00000486341.1
CDS-3UTR CAA 90 bp AGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAAAGCGAGCAGGTCCCAGTaGCAAGAATTAAAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: SLAHLHQALIPHLMAGSKASRSQ*QELKPC
Trigger: GCAAGGCTTTAATTCTTGCAACTGGGACCTGCTCGC...TTTGCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp CTTTGGAAACCGGAAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGCGGAGCACATAGTCTaGTCCCTTCCAAAGCATGGC +
Preference number: 5 (lower is better)
Translates to: LWKPEESGALTPGSNPPPAEHIV*SLPKHG
Trigger: GCCATGCTTTGGAAGGGACAAGACTATGTGCTCCGC...AGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTTCCGGTTTCCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp AGACCCCTGCTTAGATTGCCATACTCGCACCATTCCAAACCTGCCTCCCTCACAGTAGCCCCAAATTCGTaGTTGGAGGCGGTCTCCGCT +
Preference number: 5 (lower is better)
Translates to: RPLLRLPYSHHSKPASLTVAPNS*LEAVSA
Trigger: AGCGGAGACCGCCTCCAACAACGAATTTGGGGCTAC...TGTGAGGGAGGCAGGTTTGGAATGGTGCGAGTATGGCAATCTAAGCAGGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp AGGGACTGGCCAGAATGGAGGAAGAGCTGGAAAGACTCGTGGGCCTCAGTCCCTAGCCAGAACTCCCATTaGGGAGGCTTAGTTCCATGT +
Preference number: 5 (lower is better)
Translates to: RDWPEWRKSWKDSWASVPSQNSH*GGLVPC
Trigger: ACATGGAACTAAGCCTCCCAAATGGGAGTTCTGGCT...AGGGACTGAGGCCCACGAGTCTTTCCAGCTCTTCCTCCATTCTGGCCAGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS GCA 90 bp GCAGCTTCATCCCGTACTTGTCCACGCACCAGCAGATGCCACGTTTaGGGCCACGGGAAGGTTTGCACTGCTTTCTCTTGTAGAATCCTT +
Preference number: 5 (lower is better)
Translates to: AASSRTCPRTSRCHV*GHGKVCTAFSCRIL
Trigger: AAGGATTCTACAAGAGAAAGCAGTGCAAACCTTCCCGTGGCCGCAAACGTGGCATCTGCTGGTGCGTGGACAAGTACGGGATGAAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp GTTGCCATTTTCGAAGTTGAGCCCTTGCTAGAGATTCCGAGGTCCTCAGTTTCCGAGATGCGGGTGTGTTaGGGCCGGAAGATCTTGGGG +
Preference number: 5 (lower is better)
Translates to: VAIFEVEPLLEIPRSSVSEMRVC*GRKILG
Trigger: CCCCAAGATCTTCCGGCCCAAACACACCCGCATCTC...GGAAACTGAGGACCTCGGAATCTCTAGCAAGGGCTCAACTTCGAAAATGGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGTTCGAAGTTGAGCCCTaGCTAGAGATTCCGAGGTCC +
Preference number: 5 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGEFEVEP*LEIPRS
Trigger: GGACCTCGGAATCTCTAGCAAGGGCTCAACTTCGAA...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp AGACCCCTGCTTAGATTGCCATACTCGCACCATTCCAAACCTGCCTCCCTCACATCGCAGGCACGAACTTaGGAAACCGGAAGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: RPLLRLPYSHHSKPASLTSQART*ETGRVW
Trigger: CCAGACTCTTCCGGTTTCCAAAGTTCGTGCCTGCGA...TGTGAGGGAGGCAGGTTTGGAATGGTGCGAGTATGGCAATCTAAGCAGGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp CTCACTGGTGGAGTGAGGCACGAATCTAAAGGGGATGGGAAGACCTTCTGTGGGAGACCCCTGCTTAGATaGCCATACTCGCACCATTCC +
Preference number: 5 (lower is better)
Translates to: LTGGVRHESKGDGKTFCGRPLLR*PYSHHS
Trigger: GGAATGGTGCGAGTATGGCAATCTAAGCAGGGGTCT...CCCACAGAAGGTCTTCCCATCCCCTTTAGATTCGTGCCTCACTCCACCAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp TGTTCCTCCCCACATCGACTCTGGCCGGAACCATCCATCTTACTGTTCTCCTGCTCTCTCGATCTTGACTaGCTCGCGGTAGCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: CSSPHRLWPEPSILLFSCSLDLD*LAVALF
Trigger: GAAAAGAGCTACCGCGAGCAAGTCAAGATCGAGAGA...GCAGGAGAACAGTAAGATGGATGGTTCCGGCCAGAGTCGATGTGGGGAGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp GTTGCCATTTTCGAAGTTGAGCCCTTGCTAGAGATTCCGAGGTCCTCAGTTTCCCCTTTGCGGTCACAATaGGGCAGGTACACAGCACGG +
Preference number: 5 (lower is better)
Translates to: VAIFEVEPLLEIPRSSVSPLRSQ*GRYTAR
Trigger: CCGTGCTGTGTACCTGCCCAATTGTGACCGCAAAGG...GGAAACTGAGGACCTCGGAATCTCTAGCAAGGGCTCAACTTCGAAAATGGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp AAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCAAAAAGCTGAGTTTATaGCTCACGGGAAACTCTGCC +
Preference number: 5 (lower is better)
Translates to: KSLAHLHQALIPHLMAGSKKLSL*LTGNSA
Trigger: GGCAGAGTTTCCCGTGAGCAATAAACTCAGCTTTTT...GCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGTCCATCGTGGACCTGTaGGGCTCATGTGGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVSIVDL*GSCGVV
Trigger: CACCACACCACATGAGCCCAACAGGTCCACGATGGA...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp AAGAGTCTGGCGCACTTACACCAGGCTCTAATCCCCCACCTGATGGCTGGCAGCCTAAGGAAATTTCTATaGGCTTTTCCCCCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: KSLAHLHQALIPHLMAGSLRKFL*AFPPFC
Trigger: GCAGAAAGGGGGAAAAGCCAATAGAAATTTCCTTAG...GCTGCCAGCCATCAGGTGGGGGATTAGAGCCTGGTGTAAGTGCGCCAGACTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp CTCACTGGTGGAGTGAGGCACGAATCTAAAGGGGATGGGAAGACCTTCTGTGGGAAGGCCACCCATTGGTaGAGGAAGTCATTGGAGAAT +
Preference number: 5 (lower is better)
Translates to: LTGGVRHESKGDGKTFCGKATHW*RKSLEN
Trigger: ATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTT...CCCACAGAAGGTCTTCCCATCCCCTTTAGATTCGTGCCTCACTCCACCAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp CACTTTAGTGGTTTTAAAAACACAGACAGTACAAGGCCCAGGTTGCTGGCTGGTGCCCCAAATTCGTTGTaGGAGGCGGTCTCCGCTGTG +
Preference number: 5 (lower is better)
Translates to: HFSGFKNTDSTRPRLLAGAPNSL*EAVSAV
Trigger: CACAGCGGAGACCGCCTCCAACAACGAATTTGGGGC...ACCAGCCAGCAACCTGGGCCTTGTACTGTCTGTGTTTTTAAAACCACTAAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp AGGGACTGGCCAGAATGGAGGAAGAGCTGGAAAGACTCGTGGGCCTCAGTCCCTGAATCTGAAGGAATCTaGTCTGACAACTGTGCTATC +
Preference number: 5 (lower is better)
Translates to: RDWPEWRKSWKDSWASVPESEGI*SDNCAI
Trigger: GATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC...AGGGACTGAGGCCCACGAGTCTTTCCAGCTCTTCCTCCATTCTGGCCAGTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp CTGCATCTAAACCTTTTTGCCACCATCTCCCTCTGCCATCTCTTACTTCAGTCTAGTACAAGGCCCAGGTaGCTGGCTGGTGAAACCCCT +
Preference number: 5 (lower is better)
Translates to: LHLNLFATISLCHLLLQSSTRPR*LAGETP
Trigger: AGGGGTTTCACCAGCCAGCAACCTGGGCCTTGTACT...AGACTGAAGTAAGAGATGGCAGAGGGAGATGGTGGCAAAAAGGTTTAGATGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp GAATCTGAAGGAATCTTGTCTGACAACTGTGCTATCCATGTGGGCTACGGTGTGGCAAGAATTAAAGCCTaGCAACAGGTTGGGGGAAGC +
Preference number: 5 (lower is better)
Translates to: ESEGILSDNCAIHVGYGVARIKA*QQVGGS
Trigger: GCTTCCCCCAACCTGTTGCAAGGCTTTAATTCTTGC...CACACCGTAGCCCACATGGATAGCACAGTTGTCAGACAAGATTCCTTCAGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp GTTGCCATTTTCGAAGTTGAGCCCTTGCTAGAGATTCCGAGGTCCTCAGTTTCCATACAGAAACGTGAGTaGGGTTTAGGGGACAGCTGT +
Preference number: 5 (lower is better)
Translates to: VAIFEVEPLLEIPRSSVSIQKRE*GLGDSC
Trigger: ACAGCTGTCCCCTAAACCCAACTCACGTTTCTGTAT...GGAAACTGAGGACCTCGGAATCTCTAGCAAGGGCTCAACTTCGAAAATGGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp AAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGCTCTTTTCTCCCACTTaGCCACCTCCTCTTCGAAAT +
Preference number: 5 (lower is better)
Translates to: KEQSQGHPLVEEVIGEWELFSPT*PPPLRN
Trigger: ATTTCGAAGAGGAGGTGGCAAAGTGGGAGAAAAGAG...CTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp CAGCACTTAGATTCGGAGCCATGGATAGTCCGGAGTCCAAGGTCTCTGGGTGAGTGTCTTTTTAGCTTTTaGCATCTCTGTTGTTGCCAT +
Preference number: 5 (lower is better)
Translates to: QHLDSEPWIVRSPRSLGECLFSF*HLCCCH
Trigger: ATGGCAACAACAGAGATGCAAAAAGCTAAAAAGACA...CTCACCCAGAGACCTTGGACTCCGGACTATCCATGGCTCCGAATCTAAGTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp ATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCAAAAGCCCACACTGCTTaGCAGCTCTTTCCTAGCTCT +
Preference number: 5 (lower is better)
Translates to: ISSALKNSHKATHWLRKSKAHTA*QLFPSS
Trigger: AGAGCTAGGAAAGAGCTGCAAAGCAGTGTGGGCTTT...TGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp ATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCACACCCCAGTATCCACTaGGCAGATCCTAGTTGGATA +
Preference number: 5 (lower is better)
Translates to: ISSALKNSHKATHWLRKSHPSIH*ADPSWI
Trigger: TATCCAACTAGGATCTGCCAAGTGGATACTGGGGTG...TGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp CACTTTAGTGGTTTTAAAAACACAGACAGTACAAGGCCCAGGTTGCTGGCTGGTTTTGCATCTCTGTTGTaGCCATTTTCGAAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: HFSGFKNTDSTRPRLLAGFASLL*PFSKLS
Trigger: GCTCAACTTCGAAAATGGCAACAACAGAGATGCAAA...ACCAGCCAGCAACCTGGGCCTTGTACTGTCTGTGTTTTTAAAACCACTAAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp AAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATTGGAGAATGGGAGCTCTGTTCATCCAACTaGCCTCAAAAAGAAAACCAT +
Preference number: 5 (lower is better)
Translates to: KEQSQGHPLVEEVIGEWELCSSN*PQKENH
Trigger: ATGGTTTTCTTTTTGAGGCAAGTTGGATGAACAGAG...CTCCCATTCTCCAATGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp CACTTTAGTGGTTTTAAAAACACAGACAGTACAAGGCCCAGGTTGCTGGCTGGTCAAGTCTTTCCAATATaGGGGCATGTATTGATTTCT +
Preference number: 5 (lower is better)
Translates to: HFSGFKNTDSTRPRLLAGQVFPI*GHVLIS
Trigger: AGAAATCAATACATGCCCCAATATTGGAAAGACTTG...ACCAGCCAGCAACCTGGGCCTTGTACTGTCTGTGTTTTTAAAACCACTAAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS-3UTR CAA 90 bp ATATCTTCAGCCTTAAAGAACAGTCACAAGGCCACCCATTGGTTGAGGAAGTCATCAGTTGAAACAGATTaGCTTTTTCGCTATTCCTCT +
Preference number: 5 (lower is better)
Translates to: ISSALKNSHKATHWLRKSSVETD*LFRYSS
Trigger: AGAGGAATAGCGAAAAAGCAAATCTGTTTCAACTGA...TGACTTCCTCAACCAATGGGTGGCCTTGTGACTGTTCTTTAAGGCTGAAGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS TCA 72 bp GGTTGGGGGAAGCAGGGCAGCGCCAGGTGCACGCAGTaGGCGGAGGCCGGAGAAACCCTCAAGCCTGAGCGG +
Preference number: 6 (lower is better)
Translates to: GWGKQGSARCTQ*AEAGETLKPER
Trigger: CCGCTCAGGCTTGAGGGTTTCTCCGGCCTCCGCTCACTGCGTGCACCTGGCGCTGCCCTGCTTCCCCCAACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS GCA 72 bp GCACGGGGCACCATGCGTGGGCTGGCTTTGAGCTCCTaGAGGGAAGCCTCCATGTGTCTGCGGCAGGGGCCC +
Preference number: 6 (lower is better)
Translates to: ARGTMRGLALSS*REASMCLRQGP
Trigger: GGGCCCCTGCCGCAGACACATGGAGGCTTCCCTGCAGGAGCTCAAAGCCAGCCCACGCATGGTGCCCCGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS TCA 72 bp GGTACACAGCACGGGGCACCATGCGTGGGCTGGCTTTaGGCTCCTGCAGGGAAGCCTCCATGTGTCTGCGGC +
Preference number: 6 (lower is better)
Translates to: GTQHGAPCVGWL*APAGKPPCVCG
Trigger: GCCGCAGACACATGGAGGCTTCCCTGCAGGAGCTCAAAGCCAGCCCACGCATGGTGCCCCGTGCTGTGTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS TCA 72 bp GCCCCGCATAGGCGGCCAGCAGCAGGAGGACCGCGGTaGGCAACACCATCTTCTCTTAGTCGCCCCCTTTAC +
Preference number: 6 (lower is better)
Translates to: APHRRPAAGGPR*ATPSSLSRPLY
Trigger: GTAAAGGGGGCGACTAAGAGAAGATGGTGTTGCTCACCGCGGTCCTCCTGCTGCTGGCCGCCTATGCGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS GCA 72 bp GCAGGGGCCCTGCTCAGACTCCTGTCTCATCTCAGGTaGAGAGATGATCCGGGGGTGGGCAGTGTTCTCGGC +
Preference number: 6 (lower is better)
Translates to: AGALLRLLSHLR*RDDPGVGSVLG
Trigger: GCCGAGAACACTGCCCACCCCCGGATCATCTCTGCACCTGAGATGAGACAGGAGTCTGAGCAGGGCCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS GCA 72 bp GTCTCCTCGGCCATCTCAGAGGTGGTGGGCTCCTCGTaGTCACGGGAGTCTCTCTCTGCAGGAGAAGGAGCC +
Preference number: 6 (lower is better)
Translates to: VSSAISEVVGSS*SRESLSAGEGA
Trigger: GGCTCCTTCTCCTGCAGAGAGAGACTCCCGTGAGCACGAGGAGCCCACCACCTCTGAGATGGCCGAGGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449583.1
CDS CAA 72 bp AGGTACACAGCACGGGGCACCATGCGTGGGCTGGCTTaGAGCTCCTGCAGGGAAGCCTCCATGTGTCTGCGG +
Preference number: 6 (lower is better)
Translates to: RYTARGTMRGLA*SSCREASMCLR
Trigger: CCGCAGACACATGGAGGCTTCCCTGCAGGAGCTCAAAGCCAGCCCACGCATGGTGCCCCGTGCTGTGTACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS CAA 90 bp GGCTGGGGTGCCTGCGAGCAGGTCCCAGTTGCAAGAATTAAAGCCTaGCAACAGGTTGGGGGAAGCAGGGCAGCGCCAGGTGCACGCAGT +
Preference number: 6 (lower is better)
Translates to: GWGACEQVPVARIKA*QQVGGSRAAPGARS
Trigger: ACTGCGTGCACCTGGCGCTGCCCTGCTTCCCCCAACCTGTTGCAAGGCTTTAATTCTTGCAACTGGGACCTGCTCGCAGGCACCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS CCA 72 bp TCTTGGGGGAGTAGGTCTCCTCGGCCATCTCAGAGGTaGTGGGCTCCTCGTGCTCACGGGAGTCTCTCTCGA +
Preference number: 6 (lower is better)
Translates to: SWGSRSPRPSQR*WAPRAHGSLSR
Trigger: TCGAGAGAGACTCCCGTGAGCACGAGGAGCCCACCACCTCTGAGATGGCCGAGGAGACCTACTCCCCCAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233813.5
ENST00000486341.1
CDS CCA 72 bp GCTCGGAGATGCGGGTGTGTTTGGGCCGGAAGATCTTaGGGGAGTAGGTCTCCTCGGCCATCTCAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: ARRCGCVWAGRS*GSRSPRPSQRW
Trigger: CCACCTCTGAGATGGCCGAGGAGACCTACTCCCCCAAGATCTTCCGGCCCAAACACACCCGCATCTCCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233813.5
ENST00000449583.1
ENST00000486341.1
CDS CCA 72 bp TCTTGGGGGAGTAGGTCTCCTCGGCCATCTCAGAGGTaGTGGGCTCCTCGTGCTCACGGGAGTCTCTCTCTG +
Preference number: 6 (lower is better)
Translates to: SWGSRSPRPSQR*WAPRAHGSLSL
Trigger: CAGAGAGAGACTCCCGTGAGCACGAGGAGCCCACCACCTCTGAGATGGCCGAGGAGACCTACTCCCCCAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449583.1
CDS GCA 72 bp GTCTCCTCGGCCATCTCAGAGGTGGTGGGCTCCTCGTaGTCACGGGAGTCTCTCTCGATCTTGACTTGCTCG +
Preference number: 6 (lower is better)
Translates to: VSSAISEVVGSS*SRESLSILTCS
Trigger: CGAGCAAGTCAAGATCGAGAGAGACTCCCGTGAGCACGAGGAGCCCACCACCTCTGAGATGGCCGAGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000233813.5
ENST00000486341.1
CDS CCA 72 bp AGCGGTGCGCGGCGCCGCAGAACAGGTAAGAGGCGTTaGCTGCAGCCGAGAGGGTGGGAGAAAATGTTGAAA +
Preference number: 6 (lower is better)
Translates to: SGARRRRTGKRR*LQPRGWEKMLK
Trigger: TTTCAACATTTTCTCCCACCCTCTCGGCTGCAGCCAACGCCTCTTACCTGTTCTGCGGCGCCGCGCACCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS CCA 72 bp CTGCTTCAGCCTTCAGCTCGGAGATGCGGGTGTGTTTaGGCCGGAAGATCTTGGGGGAGTAGGTCTCCTCGG +
Preference number: 6 (lower is better)
Translates to: LLQPSARRCGCV*AGRSWGSRSPR
Trigger: CCGAGGAGACCTACTCCCCCAAGATCTTCCGGCCCAAACACACCCGCATCTCCGAGCTGAAGGCTGAAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233813.5
ENST00000449583.1
ENST00000486341.1
CDS CCA 72 bp ACAATTGGGCAGGTACACAGCACGGGGCACCATGCGTaGGCTGGCTTTGAGCTCCTGCAGGGAAGCCTCCAT +
Preference number: 6 (lower is better)
Translates to: TIGQVHSTGHHA*AGFELLQGSLH
Trigger: ATGGAGGCTTCCCTGCAGGAGCTCAAAGCCAGCCCACGCATGGTGCCCCGTGCTGTGTACCTGCCCAATTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS CAA 72 bp CGGGGGTGGGCAGTGTTCTCGGCTCCCCCGACAAACTaGGACTGGGTCAGCTTCTTTCTGCGGTCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: RGWAVFSAPPTN*DWVSFFLRSFF
Trigger: GAAGAAGGACCGCAGAAAGAAGCTGACCCAGTCCAAGTTTGTCGGGGGAGCCGAGAACACTGCCCACCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233813.5
ENST00000449583.1
ENST00000486341.1
CDS CAA 90 bp AAGTCCCCGTCAACGTACTCCATGCCTGGCAGCTTCATCCCGTACTaGTCCACGCACCAGCAGATGCCACGTTTGCGGCCACGGGAAGGT +
Preference number: 6 (lower is better)
Translates to: KSPSTYSMPGSFIPY*STHQQMPRLRPREG
Trigger: ACCTTCCCGTGGCCGCAAACGTGGCATCTGCTGGTGCGTGGACAAGTACGGGATGAAGCTGCCAGGCATGGAGTACGTTGACGGGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS GCA 72 bp GCAGCTTCATCCCGTACTTGTCCACGCACCAGCAGATaGCACGTTTGCGGCCACGGGAAGGTTTGCACTGCT +
Preference number: 6 (lower is better)
Translates to: AASSRTCPRTSR*HVCGHGKVCTA
Trigger: AGCAGTGCAAACCTTCCCGTGGCCGCAAACGTGGCATCTGCTGGTGCGTGGACAAGTACGGGATGAAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS GCA 72 bp GAGATGCACCTGCTCAGACTCCTGTCTCATCTCAGGTaGAGAGATGATCCGGGGGTGGGCAGTGTTCTCGGC +
Preference number: 6 (lower is better)
Translates to: EMHLLRLLSHLR*RDDPGVGSVLG
Trigger: GCCGAGAACACTGCCCACCCCCGGATCATCTCTGCACCTGAGATGAGACAGGAGTCTGAGCAGGTGCATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486341.1
CDS CCA 72 bp GGGGGTGGGCAGTGTTCTCGGCTCCCCCGACAAACTTaGACTGGGTCAGCTTCTTTCTGCGGTCCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: GGGQCSRLPRQT*TGSASFCGPSS
Trigger: TGAAGAAGGACCGCAGAAAGAAGCTGACCCAGTCCAAGTTTGTCGGGGGAGCCGAGAACACTGCCCACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233813.5
ENST00000449583.1
ENST00000486341.1
CDS CAA 72 bp GCCTGCGAGCAGGTCCCAGTTGCAAGAATTAAAGCCTaGCAACAGGTTGGGGGAAGCAGGGCAGCGCCAGGT +
Preference number: 6 (lower is better)
Translates to: ACEQVPVARIKA*QQVGGSRAAPG
Trigger: ACCTGGCGCTGCCCTGCTTCCCCCAACCTGTTGCAAGGCTTTAATTCTTGCAACTGGGACCTGCTCGCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS CAA 90 bp GAGATGATCCGGGGGTGGGCAGTGTTCTCGGCTCCCCCGACAAACTaGGACTGGGTCAGCTTCTTTCTGCGGTCCTTCTTCACTGCTTCA +
Preference number: 6 (lower is better)
Translates to: EMIRGWAVFSAPPTN*DWVSFFLRSFFTAS
Trigger: TGAAGCAGTGAAGAAGGACCGCAGAAAGAAGCTGACCCAGTCCAAGTTTGTCGGGGGAGCCGAGAACACTGCCCACCCCCGGATCATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233813.5
ENST00000449583.1
ENST00000486341.1
CDS TCA 72 bp GGCTGGGCAGTTTGGGGTGAGGGGAGTAATAAAGGCTaGAGCAGATGTGTCTCTGCCCTCCTGGAGCACACC +
Preference number: 6 (lower is better)
Translates to: GWAVWGEGSNKG*SRCVSALLEHT
Trigger: GGTGTGCTCCAGGAGGGCAGAGACACATCTGCTTCAGCCTTTATTACTCCCCTCACCCCAAACTGCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449583.1
CDS GCA 72 bp GGTCCTTCTTCACTGCTTCAGCCTTCAGCTCGGAGATaGGGGTGTGTTTGGGCCGGAAGATCTTGGGGGAGT +
Preference number: 6 (lower is better)
Translates to: GPSSLLQPSARR*GCVWAGRSWGS
Trigger: ACTCCCCCAAGATCTTCCGGCCCAAACACACCCGCATCTCCGAGCTGAAGGCTGAAGCAGTGAAGAAGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233813.5
ENST00000449583.1
ENST00000486341.1
CDS GCA 72 bp AGGTGTGGCACTGAAAGTCCCCGTCAACGTACTCCATaGCTGGCAGCTTCATCCCGTACTTGTCCACGCACC +
Preference number: 6 (lower is better)
Translates to: RCGTESPRQRTP*LAASSRTCPRT
Trigger: GGTGCGTGGACAAGTACGGGATGAAGCTGCCAGGCATGGAGTACGTTGACGGGGACTTTCAGTGCCACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS CCA 72 bp GTGGCACTGAAAGTCCCCGTCAACGTACTCCATGCCTaGCAGCTTCATCCCGTACTTGTCCACGCACCAGCA +
Preference number: 6 (lower is better)
Translates to: VALKVPVNVLHA*QLHPVLVHAPA
Trigger: TGCTGGTGCGTGGACAAGTACGGGATGAAGCTGCCAGGCATGGAGTACGTTGACGGGGACTTTCAGTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS CAA 72 bp TCAACGTACTCCATGCCTGGCAGCTTCATCCCGTACTaGTCCACGCACCAGCAGATGCCACGTTTGCGGCCA +
Preference number: 6 (lower is better)
Translates to: STYSMPGSFIPY*STHQQMPRLRP
Trigger: TGGCCGCAAACGTGGCATCTGCTGGTGCGTGGACAAGTACGGGATGAAGCTGCCAGGCATGGAGTACGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS TCA 72 bp CATCACTCAACGTTGCTGCTGTCGAAGGTGTGGCACTaGAAGTCCCCGTCAACGTACTCCATGCCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: HHSTLLLSKVWH*KSPSTYSMPGS
Trigger: GCTGCCAGGCATGGAGTACGTTGACGGGGACTTTCAGTGCCACACCTTCGACAGCAGCAACGTTGAGTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS GCA 72 bp TCCCGTACTTGTCCACGCACCAGCAGATGCCACGTTTaGGGCCACGGGAAGGTTTGCACTGCTTTCTCTTGT +
Preference number: 6 (lower is better)
Translates to: SRTCPRTSRCHV*GHGKVCTAFSC
Trigger: ACAAGAGAAAGCAGTGCAAACCTTCCCGTGGCCGCAAACGTGGCATCTGCTGGTGCGTGGACAAGTACGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS GCA 72 bp AGCTGGGAGGGAATGAGGGAATCCCCGAGATGCACCTaGTCAGACTCCTGTCTCATCTCAGGTGCAGAGATG +
Preference number: 6 (lower is better)
Translates to: SWEGMRESPRCT*SDSCLISGAEM
Trigger: CATCTCTGCACCTGAGATGAGACAGGAGTCTGAGCAGGTGCATCTCGGGGATTCCCTCATTCCCTCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486341.1
CDS CCA 72 bp TGGGCAGTGTTCTCGGCTCCCCCGACAAACTTGGACTaGGTCAGCTTCTTTCTGCGGTCCTTCTTCACTGCT +
Preference number: 6 (lower is better)
Translates to: WAVFSAPPTNLD*VSFFLRSFFTA
Trigger: AGCAGTGAAGAAGGACCGCAGAAAGAAGCTGACCCAGTCCAAGTTTGTCGGGGGAGCCGAGAACACTGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233813.5
ENST00000449583.1
ENST00000486341.1
CDS CAA 72 bp ATCCCGTACTTGTCCACGCACCAGCAGATGCCACGTTaGCGGCCACGGGAAGGTTTGCACTGCTTTCTCTTG +
Preference number: 6 (lower is better)
Translates to: IPYLSTHQQMPR*RPREGLHCFLL
Trigger: CAAGAGAAAGCAGTGCAAACCTTCCCGTGGCCGCAAACGTGGCATCTGCTGGTGCGTGGACAAGTACGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233813.5
CDS GCA 72 bp GGACTGGGTCAGCTTCTTTCTGCGGTCCTTCTTCACTaGTTCAGCCTTCAGCTCGGAGATGCGGGTGTGTTT +
Preference number: 6 (lower is better)
Translates to: GLGQLLSAVLLH*FSLQLGDAGVF
Trigger: AAACACACCCGCATCTCCGAGCTGAAGGCTGAAGCAGTGAAGAAGGACCGCAGAAAGAAGCTGACCCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233813.5
ENST00000449583.1
ENST00000486341.1
CDS CCA 72 bp ACTGCTTTCTCTTGTAGAATCCTTTGCGGTCACAATTaGGCAGGTACACAGCACGGGGCACCATGCGTGGGC +
Preference number: 6 (lower is better)
Translates to: TAFSCRILCGHN*AGTQHGAPCVG
Trigger: GCCCACGCATGGTGCCCCGTGCTGTGTACCTGCCCAATTGTGACCGCAAAGGATTCTACAAGAGAAAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233813.5