RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGFBP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000146674

Ensembl transcript IDs: ENST00000275521.10, ENST00000381083.9, ENST00000381086.9, ENST00000417621.5, ENST00000428530.5, ENST00000448817.1, ENST00000460209.1, ENST00000460477.1, ENST00000465642.1, ENST00000613132.4, ENST00000613132.5

Found 387 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCCTGAGGTGCACTGGCCGGCCTCCTTCCCCACACTTGTTTGGTTaGGTTGATGGGGTCTCCCTCTCCCTGCACCCTTCTGAGGGCTCT +
Preference number: 1 (lower is better)
Translates to: SLRCTGRPPSPHLFG*VDGVSLSLHPSEGS
Trigger: AGAGCCCTCAGAAGGGTGCAGGGAGAGGGAGACCCCATCAACCCAACCAAACAAGTGTGGGGAAGGAGGCCGGCCAGTGCACCTCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417621.5
3UTR TCA 90 bp CCTAAGTCACAAAGTCAGTGGTCGGCCGCTTCGACCAACATGTGGTaGGCATTCCACGGGCGCATGAAGTCTGGGTGCTGTGCTCGAGTC +
Preference number: 1 (lower is better)
Translates to: PKSQSQWSAASTNMW*AFHGRMKSGCCARV
Trigger: GACTCGAGCACAGCACCCAGACTTCATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCCGACCACTGACTTTGTGACTTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR TCA 90 bp GGTCGGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATaGAGTCTGGGTGCTGTGCTCGAGTCTCTGAATATTTTGATAGGA +
Preference number: 1 (lower is better)
Translates to: GRPLRPTCGEHSTGA*SLGAVLESLNILIG
Trigger: TCCTATCAAAATATTCAGAGACTCGAGCACAGCACCCAGACTTCATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCCGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR TCA 90 bp AGCCATCCTGGGCCTTCGACTGGGCCATGTCTTCAGGAAGATTCCTaGAGAGGAGGGCCCGAAATACCTGCCTTTATAGGTTCCCAGAGT +
Preference number: 1 (lower is better)
Translates to: SHPGPSTGPCLQEDS*RGGPEIPAFIGSQS
Trigger: ACTCTGGGAACCTATAAAGGCAGGTATTTCGGGCCCTCCTCTTCAGGAATCTTCCTGAAGACATGGCCCAGTCGAAGGCCCAGGATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR TCA 90 bp CCCAAGCAGTACAGGTCACTTGAAGACATAAACATTCTTCTTGGTTaGGGGATCCACGCCCTTGTTTCAGAAATGACACCACAGAAGGCT +
Preference number: 1 (lower is better)
Translates to: PKQYRSLEDINILLG*GIHALVSEMTPQKA
Trigger: AGCCTTCTGTGGTGTCATTTCTGAAACAAGGGCGTGGATCCCTCAACCAAGAAGAATGTTTATGTCTTCAAGTGACCTGTACTGCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR TCA 90 bp CCTTTAAAGAGCTTATCCTCAGAAATAAGCTTCGTCTTGAGTTGTTaGACTACAAAACACTATTTTCTGCAGTCATCCGAAGAATTGTGC +
Preference number: 1 (lower is better)
Translates to: PLKSLSSEISFVLSC*TTKHYFLQSSEELC
Trigger: GCACAATTCTTCGGATGACTGCAGAAAATAGTGTTTTGTAGTTCAACAACTCAAGACGAAGCTTATTTCTGAGGATAAGCTCTTTAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR CAA 90 bp CCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCCTGAGCCTGACTTaGCCAGACCTTCTTGGGTTTGGCCTCCGGGAGAGCAGCCCAGTC +
Preference number: 2 (lower is better)
Translates to: PHRGLQQGRVSLSLT*PDLLGFGLRESSPV
Trigger: GACTGGGCTGCTCTCCCGGAGGCCAAACCCAAGAAGGTCTGGCAAAGTCAGGCTCAGGGAGACTCTGCCCTGCTGCAGACCTCGGTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR TCA 90 bp CCACACTTGTTTGGTTGGGTTGATGGGGTCTCCCTCTCCCTGCACCCTTCTGAGGCCACGCCCAGCCCCTaGGGCTGGTCCAAGGACAGT +
Preference number: 2 (lower is better)
Translates to: PHLFGWVDGVSLSLHPSEATPSP*GWSKDS
Trigger: ACTGTCCTTGGACCAGCCTCAGGGGCTGGGCGTGGC...CTCAGAAGGGTGCAGGGAGAGGGAGACCCCATCAACCCAACCAAACAAGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417621.5
3UTR-3UTR CCA 90 bp GCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCCTGAGACCTTCTTGGGTTTaGCCTCCGGGAGAGCAGCCC +
Preference number: 2 (lower is better)
Translates to: ALCSVCPHRGLQQGRVSLRPSWV*PPGEQP
Trigger: GGGCTGCTCTCCCGGAGGCCAAACCCAAGAAGGTCT...CAGGGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp TCTCCCTGCACCCTTCTGAGGGCTCTGTCCTATTTGCTTTGCTCTTTCTGGCCCCTGGGGAAGGGCCAGTaGCCACGCCCAGCCCCTGAG +
Preference number: 2 (lower is better)
Translates to: SPCTLLRALSYLLCSFWPLGKGQ*PRPAPE
Trigger: CTCAGGGGCTGGGCGTGGCCACTGGCCCTTCCCCAG...GGGCCAGAAAGAGCAAAGCAAATAGGACAGAGCCCTCAGAAGGGTGCAGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417621.5
3UTR-3UTR TCA 90 bp ATAAAGCAGAGTGTCCCTGAGGTGCACTGGCCGGCCTCCTTCCCCACACTTGTTCCAGGCTGCCCCTCCTaGGTACTCACCCTTGCGGCA +
Preference number: 2 (lower is better)
Translates to: IKQSVPEVHWPASFPTLVPGCPS*VLTLAA
Trigger: TGCCGCAAGGGTGAGTACTCAGGAGGGGCAGCCTGG...AACAAGTGTGGGGAAGGAGGCCGGCCAGTGCACCTCAGGGACACTCTGCTTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417621.5
3UTR-3UTR CCA 90 bp AGAGCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCCAGCAAAAGCCATCCTaGGCCTTCGACTGGGCCATG +
Preference number: 2 (lower is better)
Translates to: RALCSVCPHRGLQQGRVSQQKPS*AFDWAM
Trigger: CATGGCCCAGTCGAAGGCCCAGGATGGCTTTTGCTG...GGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp GGGAGTGGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACCGGGCGCATGAAGTCTaGGTGCTGTGCTCGAGTCTC +
Preference number: 2 (lower is better)
Translates to: GSGGEACSLHRQHSRLSHRAHEV*VLCSSL
Trigger: GAGACTCGAGCACAGCACCCAGACTTCATGCGCCCG...GTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCCACTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR TCA 90 bp TTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGGTGAAGCGCATTCCACGGGCGCATaGAGTCTGGGTGCTGTGCTC +
Preference number: 2 (lower is better)
Translates to: FPILDKACAHCTGSGGEAHSTGA*SLGAVL
Trigger: GAGCACAGCACCCAGACTTCATGCGCCCGTGGAATG...CGCTTCACCCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR GCA 90 bp AGAGCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCCGCATGAAGTCTGGGTaGTGTGCTCGAGTCTCTGAA +
Preference number: 2 (lower is better)
Translates to: RALCSVCPHRGLQQGRVSRMKSG*CARVSE
Trigger: TTCAGAGACTCGAGCACAGCACCCAGACTTCATGCG...GGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp CTTCCCCACACTTGTTTGGTTGGGTTGATGGGGTCTCCCTCTCCCTGCACCCTTCTGAGCTGCAGCTCCTaGGTCTGTAAGCCTGGGGAA +
Preference number: 2 (lower is better)
Translates to: LPHTCLVGLMGSPSPCTLLSCSS*VCKPGE
Trigger: TTCCCCAGGCTTACAGACCCAGGAGCTGCAGCTCAG...AAGGGTGCAGGGAGAGGGAGACCCCATCAACCCAACCAAACAAGTGTGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417621.5
3UTR-3UTR TCA 90 bp TTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGGTGAAGCGTCGACCAACATGTGGTaGGCATTCCACGGGCGCATG +
Preference number: 2 (lower is better)
Translates to: FPILDKACAHCTGSGGEASTNMW*AFHGRM
Trigger: CATGCGCCCGTGGAATGCTCACCACATGTTGGTCGA...CGCTTCACCCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR TCA 90 bp AGAGCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCCTTCAGGAAGATTCCTaGAGAGGAGGGCCCGAAATA +
Preference number: 2 (lower is better)
Translates to: RALCSVCPHRGLQQGRVSLQEDS*RGGPEI
Trigger: TATTTCGGGCCCTCCTCTTCAGGAATCTTCCTGAAG...GGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR GCA 90 bp CCACACTTGTTTGGTTGGGTTGATGGGGTCTCCCTCTCCCTGCACCCTTCTGAGTTTCTGGCCCTGAGCTaGAGCTCCTGGGTCTGTAAG +
Preference number: 2 (lower is better)
Translates to: PHLFGWVDGVSLSLHPSEFLALS*SSWVCK
Trigger: CTTACAGACCCAGGAGCTGCAGCTCAGGGCCAGAAA...CTCAGAAGGGTGCAGGGAGAGGGAGACCCCATCAACCCAACCAAACAAGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417621.5
3UTR-3UTR GCA 90 bp GGGAGTGGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACCGCATGAAGTCTGGGTaGTGTGCTCGAGTCTCTGAA +
Preference number: 2 (lower is better)
Translates to: GSGGEACSLHRQHSRLSHRMKSG*CARVSE
Trigger: TTCAGAGACTCGAGCACAGCACCCAGACTTCATGCG...GTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCCACTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp GTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTCCCTGTCTCTCTCGGGCGCATGAAGTCTaGGTGCTGTGCTCGAGTCTC +
Preference number: 2 (lower is better)
Translates to: VPLLVMPLNVEADSPCLSRAHEV*VLCSSL
Trigger: GAGACTCGAGCACAGCACCCAGACTTCATGCGCCCG...AGAGAGACAGGGAGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR GCA 90 bp CAGCAAAAGCCATCCTGGGCCTTCGACTGGGCCATGTCTTCAGGAAGATTCCTGCGCATGAAGTCTGGGTaGTGTGCTCGAGTCTCTGAA +
Preference number: 2 (lower is better)
Translates to: QQKPSWAFDWAMSSGRFLRMKSG*CARVSE
Trigger: TTCAGAGACTCGAGCACAGCACCCAGACTTCATGCG...CAGGAATCTTCCTGAAGACATGGCCCAGTCGAAGGCCCAGGATGGCTTTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR GCA 90 bp CTTCCCCACACTTGTTTGGTTGGGTTGATGGGGTCTCCCTCTCCCTGCACCCTTGGGCTCTGTCCTATTTaGTTTGCTCTTTCTGGCCCT +
Preference number: 2 (lower is better)
Translates to: LPHTCLVGLMGSPSPCTLGLCPI*FALSGP
Trigger: AGGGCCAGAAAGAGCAAAGCAAATAGGACAGAGCCC...AAGGGTGCAGGGAGAGGGAGACCCCATCAACCCAACCAAACAAGTGTGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417621.5
3UTR-3UTR TCA 90 bp GCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCCTGCTGACTACTGGAAAGTaGAAAGATGCTCAAGTTTAC +
Preference number: 2 (lower is better)
Translates to: ALCSVCPHRGLQQGRVSLLTTGK*KDAQVY
Trigger: GTAAACTTGAGCATCTTTTCACTTTCCAGTAGTCAG...CAGGGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp GCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCCTGTCCTTTCCTCAGTCATaGCCACAGTTGTATCATATA +
Preference number: 2 (lower is better)
Translates to: ALCSVCPHRGLQQGRVSLSFPQS*PQLYHI
Trigger: TATATGATACAACTGTGGCCATGACTGAGGAAAGGA...CAGGGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp CGTGAGCTCCTTTCCTCAGTCATGGCCACAGTTGTATCATATAGCATCTCTAACTCCAGGAGCATGCGTTaGGATGTCCGGATGACCGGG +
Preference number: 2 (lower is better)
Translates to: RELLSSVMATVVSYSISNSRSMR*DVRMTG
Trigger: CCCGGTCATCCGGACATCCCAACGCATGCTCCTGGA...GTTAGAGATGCTATATGATACAACTGTGGCCATGACTGAGGAAAGGAGCTCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp ATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTTCCAGGAGCATGCGTTaGGATGTCCGGATGACCGGG +
Preference number: 2 (lower is better)
Translates to: IRRIVPLLVMPLNVEADSSRSMR*DVRMTG
Trigger: CCCGGTCATCCGGACATCCCAACGCATGCTCCTGGA...AGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp AGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTCCCTGTCAGCAAAAGCCATCCTaGGCCTTCGACTGGGCCATG +
Preference number: 2 (lower is better)
Translates to: RIVPLLVMPLNVEADSPCQQKPS*AFDWAM
Trigger: CATGGCCCAGTCGAAGGCCCAGGATGGCTTTTGCTG...ACAGGGAGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR TCA 90 bp CGTGAGCTCCTTTCCTCAGTCATGGCCACAGTTGTATCATATAGCATCTCTAACTCGACCAACATGTGGTaGGCATTCCACGGGCGCATG +
Preference number: 2 (lower is better)
Translates to: RELLSSVMATVVSYSISNSTNMW*AFHGRM
Trigger: CATGCGCCCGTGGAATGCTCACCACATGTTGGTCGA...GTTAGAGATGCTATATGATACAACTGTGGCCATGACTGAGGAAAGGAGCTCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR TCA 90 bp AGGCAGAATGTCTTGAGACCCCTCTGTTTTCAAGGAGAGCTCTATGCAGCGTGTTCTGAATGTGGAGGCTaGCTCTCCCTGTCTCTCTGT +
Preference number: 2 (lower is better)
Translates to: RQNVLRPLCFQGELYAACSECGG*LSLSLC
Trigger: ACAGAGAGACAGGGAGAGTCAGCCTCCACATTCAGA...ACACGCTGCATAGAGCTCTCCTTGAAAACAGAGGGGTCTCAAGACATTCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp GGGAGTGGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACTGCTGGTCATGTCCTTaGCAGTCTTTTGTGCAAAAT +
Preference number: 2 (lower is better)
Translates to: GSGGEACSLHRQHSRLSHCWSCP*QSFVQN
Trigger: ATTTTGCACAAAAGACTGCCAAGGACATGACCAGCA...GTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCCACTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR TCA 90 bp AAACATTCTTCTTGGTTGAGGGATCCACGCCCTTGTTTCAGAAATGACACCACATCGACCAACATGTGGTaGGCATTCCACGGGCGCATG +
Preference number: 2 (lower is better)
Translates to: KHSSWLRDPRPCFRNDTTSTNMW*AFHGRM
Trigger: CATGCGCCCGTGGAATGCTCACCACATGTTGGTCGA...TGTGGTGTCATTTCTGAAACAAGGGCGTGGATCCCTCAACCAAGAAGAATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR GCA 90 bp AGGCAGAATGTCTTGAGACCCCTCTGTTTTCAAGGAGAGCTCTATGCAGCGTGTAGGGCCCGAAATACCTaGCTTTATAGGTTCCCAGAG +
Preference number: 2 (lower is better)
Translates to: RQNVLRPLCFQGELYAACRARNT*LYRFPE
Trigger: CTCTGGGAACCTATAAAGGCAGGTATTTCGGGCCCT...ACACGCTGCATAGAGCTCTCCTTGAAAACAGAGGGGTCTCAAGACATTCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp TTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGGTGAAGCGTGCTGGTCATGTCCTTaGCAGTCTTTTGTGCAAAAT +
Preference number: 2 (lower is better)
Translates to: FPILDKACAHCTGSGGEACWSCP*QSFVQN
Trigger: ATTTTGCACAAAAGACTGCCAAGGACATGACCAGCA...CGCTTCACCCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp AGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTCCCTGTAAGTCACAAAGTCAGTaGTCGGCCGCTTCGACCAAC +
Preference number: 2 (lower is better)
Translates to: RIVPLLVMPLNVEADSPCKSQSQ*SAASTN
Trigger: GTTGGTCGAAGCGGCCGACCACTGACTTTGTGACTT...ACAGGGAGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp ATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTTCCTGGGCCTTCGACTaGGCCATGTCTTCAGGAAGA +
Preference number: 2 (lower is better)
Translates to: IRRIVPLLVMPLNVEADSSWAFD*AMSSGR
Trigger: TCTTCCTGAAGACATGGCCCAGTCGAAGGCCCAGGA...AGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR TCA 90 bp AGTCACAAAGTCAGTGGTCGGCCGCTTCGACCAACATGTGGTGAGCATTCCACGCTGACTACTGGAAAGTaGAAAGATGCTCAAGTTTAC +
Preference number: 2 (lower is better)
Translates to: SHKVSGRPLRPTCGEHSTLTTGK*KDAQVY
Trigger: GTAAACTTGAGCATCTTTTCACTTTCCAGTAGTCAG...CGTGGAATGCTCACCACATGTTGGTCGAAGCGGCCGACCACTGACTTTGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp CGTGAGCTCCTTTCCTCAGTCATGGCCACAGTTGTATCATATAGCATCTCTAACAAGTCACAAAGTCAGTaGTCGGCCGCTTCGACCAAC +
Preference number: 2 (lower is better)
Translates to: RELLSSVMATVVSYSISNKSQSQ*SAASTN
Trigger: GTTGGTCGAAGCGGCCGACCACTGACTTTGTGACTT...GTTAGAGATGCTATATGATACAACTGTGGCCATGACTGAGGAAAGGAGCTCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp CTTCCCCACACTTGTTTGGTTGGGTTGATGGGGTCTCCCTCTCCCTGCACCCTTTCTTCACTTTGTGTGTaGATGAATGATAGCTTAGGT +
Preference number: 2 (lower is better)
Translates to: LPHTCLVGLMGSPSPCTLSSLCV*MNDSLG
Trigger: ACCTAAGCTATCATTCATCCACACACAAAGTGAAGA...AAGGGTGCAGGGAGAGGGAGACCCCATCAACCCAACCAAACAAGTGTGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417621.5
3UTR-3UTR TCA 90 bp ACTATTTTCTGCAGTCATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAACACCACAGAAGGCTGTaGGCTCCAGGAGCATGCGTT +
Preference number: 2 (lower is better)
Translates to: TIFCSHPKNCAITCDASEHHRRL*APGACV
Trigger: AACGCATGCTCCTGGAGCTCACAGCCTTCTGTGGTG...TTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGATGACTGCAGAAAATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp TCTGGGTGCTGTGCTCGAGTCTCTGAATATTTTGATAGGAAGCGACAAGAAAATGCTGTAGCCAGCTGCTaGTCATGTCCTTGGCAGTCT +
Preference number: 2 (lower is better)
Translates to: SGCCARVSEYFDRKRQENAVASC*SCPWQS
Trigger: AGACTGCCAAGGACATGACCAGCAGCTGGCTACAGC...ATTTTCTTGTCGCTTCCTATCAAAATATTCAGAGACTCGAGCACAGCACCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp ACTATTTTCTGCAGTCATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAACAGCAAAAGCCATCCTaGGCCTTCGACTGGGCCATG +
Preference number: 2 (lower is better)
Translates to: TIFCSHPKNCAITCDASEQQKPS*AFDWAM
Trigger: CATGGCCCAGTCGAAGGCCCAGGATGGCTTTTGCTG...TTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGATGACTGCAGAAAATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR TCA 90 bp AGCTTTGCCTTTAAAGAGCTTATCCTCAGAAATAAGCTTCGTCTTGAGTTGTTGCACCACAGAAGGCTGTaGGCTCCAGGAGCATGCGTT +
Preference number: 2 (lower is better)
Translates to: SFAFKELILRNKLRLELLHHRRL*APGACV
Trigger: AACGCATGCTCCTGGAGCTCACAGCCTTCTGTGGTG...CAACAACTCAAGACGAAGCTTATTTCTGAGGATAAGCTCTTTAAAGGCAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR TCA 90 bp AGCATGAGAATGACTCTAAGTTCAACAAACATGGGTGAATCTCTATGTGCTCCCTCTGAATGTGGAGGCTaGCTCTCCCTGTCTCTCTGT +
Preference number: 2 (lower is better)
Translates to: SMRMTLSSTNMGESLCAPSECGG*LSLSLC
Trigger: ACAGAGAGACAGGGAGAGTCAGCCTCCACATTCAGA...GGGAGCACATAGAGATTCACCCATGTTTGTTGAACTTAGAGTCATTCTCATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp AGCTTTGCCTTTAAAGAGCTTATCCTCAGAAATAAGCTTCGTCTTGAGTTGTTGCAGCAAAAGCCATCCTaGGCCTTCGACTGGGCCATG +
Preference number: 2 (lower is better)
Translates to: SFAFKELILRNKLRLELLQQKPS*AFDWAM
Trigger: CATGGCCCAGTCGAAGGCCCAGGATGGCTTTTGCTG...CAACAACTCAAGACGAAGCTTATTTCTGAGGATAAGCTCTTTAAAGGCAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR CAA 90 bp GCCCAGTCTCTGGGCGTGAGCTCCTTTCCTCAGTCATGGCCACAGTaGTATCATATAGCATCTCTAACATTTCATCTAGGATTATCTAGT +
Preference number: 2 (lower is better)
Translates to: AQSLGVSSFPQSWPQ*YHIASLTFHLGLSS
Trigger: ACTAGATAATCCTAGATGAAATGTTAGAGATGCTATATGATACAACTGTGGCCATGACTGAGGAAAGGAGCTCACGCCCAGAGACTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR GCA 90 bp ACTATTTTCTGCAGTCATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAACGCATGAAGTCTGGGTaGTGTGCTCGAGTCTCTGAA +
Preference number: 2 (lower is better)
Translates to: TIFCSHPKNCAITCDASERMKSG*CARVSE
Trigger: TTCAGAGACTCGAGCACAGCACCCAGACTTCATGCG...TTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGATGACTGCAGAAAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp GGGGCTATGTTGTATACAATGTTAACAAGAACATATCTTCTCTGCATATATGTGCGGGCGCATGAAGTCTaGGTGCTGTGCTCGAGTCTC +
Preference number: 2 (lower is better)
Translates to: GAMLYTMLTRTYLLCIYVRAHEV*VLCSSL
Trigger: GAGACTCGAGCACAGCACCCAGACTTCATGCGCCCG...CACATATATGCAGAGAAGATATGTTCTTGTTAACATTGTATACAACATAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR TCA 90 bp AGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTCCCTGTCTGACTACTGGAAAGTaGAAAGATGCTCAAGTTTAC +
Preference number: 2 (lower is better)
Translates to: RIVPLLVMPLNVEADSPCLTTGK*KDAQVY
Trigger: GTAAACTTGAGCATCTTTTCACTTTCCAGTAGTCAG...ACAGGGAGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR TCA 90 bp ACTATTTTCTGCAGTCATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAAGTTGGGATGTCCGGATaGCCGGGGTTTAAAGGTTTT +
Preference number: 2 (lower is better)
Translates to: TIFCSHPKNCAITCDASEVGMSG*PGFKGF
Trigger: AAAACCTTTAAACCCCGGTCATCCGGACATCCCAAC...TTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGATGACTGCAGAAAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp ATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTTGCTGGTCATGTCCTTaGCAGTCTTTTGTGCAAAAT +
Preference number: 2 (lower is better)
Translates to: IRRIVPLLVMPLNVEADSCWSCP*QSFVQN
Trigger: ATTTTGCACAAAAGACTGCCAAGGACATGACCAGCA...AGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR TCA 90 bp AGCTTTGCCTTTAAAGAGCTTATCCTCAGAAATAAGCTTCGTCTTGAGTTGTTGCTTCAGGAAGATTCCTaGAGAGGAGGGCCCGAAATA +
Preference number: 2 (lower is better)
Translates to: SFAFKELILRNKLRLELLLQEDS*RGGPEI
Trigger: TATTTCGGGCCCTCCTCTTCAGGAATCTTCCTGAAG...CAACAACTCAAGACGAAGCTTATTTCTGAGGATAAGCTCTTTAAAGGCAAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp GGGGCTATGTTGTATACAATGTTAACAAGAACATATCTTCTCTGCATATATGTGTCCTGGGCCTTCGACTaGGCCATGTCTTCAGGAAGA +
Preference number: 2 (lower is better)
Translates to: GAMLYTMLTRTYLLCIYVSWAFD*AMSSGR
Trigger: TCTTCCTGAAGACATGGCCCAGTCGAAGGCCCAGGA...CACATATATGCAGAGAAGATATGTTCTTGTTAACATTGTATACAACATAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp AGCATGAGAATGACTCTAAGTTCAACAAACATGGGTGAATCTCTATGTGCTCCCTGCTGGTCATGTCCTTaGCAGTCTTTTGTGCAAAAT +
Preference number: 2 (lower is better)
Translates to: SMRMTLSSTNMGESLCAPCWSCP*QSFVQN
Trigger: ATTTTGCACAAAAGACTGCCAAGGACATGACCAGCA...GGGAGCACATAGAGATTCACCCATGTTTGTTGAACTTAGAGTCATTCTCATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR TCA 90 bp TCTGGGTGCTGTGCTCGAGTCTCTGAATATTTTGATAGGAAGCGACAAGAAAATCTGACTACTGGAAAGTaGAAAGATGCTCAAGTTTAC +
Preference number: 2 (lower is better)
Translates to: SGCCARVSEYFDRKRQENLTTGK*KDAQVY
Trigger: GTAAACTTGAGCATCTTTTCACTTTCCAGTAGTCAG...ATTTTCTTGTCGCTTCCTATCAAAATATTCAGAGACTCGAGCACAGCACCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR TCA 90 bp AGCATGAGAATGACTCTAAGTTCAACAAACATGGGTGAATCTCTATGTGCTCCCGCAGTACAGGTCACTTaGAGACATAAACATTCTTCT +
Preference number: 2 (lower is better)
Translates to: SMRMTLSSTNMGESLCAPAVQVT*RHKHSS
Trigger: AGAAGAATGTTTATGTCTTCAAGTGACCTGTACTGC...GGGAGCACATAGAGATTCACCCATGTTTGTTGAACTTAGAGTCATTCTCATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR GCA 90 bp AGCATGAGAATGACTCTAAGTTCAACAAACATGGGTGAATCTCTATGTGCTCCCTATAGGTTCCCAGAGTaGCCTAGAACATTCTTAGAT +
Preference number: 2 (lower is better)
Translates to: SMRMTLSSTNMGESLCAPYRFPE*PRTFLD
Trigger: ATCTAAGAATGTTCTAGGGCACTCTGGGAACCTATA...GGGAGCACATAGAGATTCACCCATGTTTGTTGAACTTAGAGTCATTCTCATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR GCA 90 bp GGGGCTATGTTGTATACAATGTTAACAAGAACATATCTTCTCTGCATATATGTGAGGGCCCGAAATACCTaGCTTTATAGGTTCCCAGAG +
Preference number: 2 (lower is better)
Translates to: GAMLYTMLTRTYLLCIYVRARNT*LYRFPE
Trigger: CTCTGGGAACCTATAAAGGCAGGTATTTCGGGCCCT...CACATATATGCAGAGAAGATATGTTCTTGTTAACATTGTATACAACATAGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CCA 90 bp GGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGACCTTCTTCACTTTGTGTGTaGATGAATGATAGCTTAGGT +
Preference number: 2 (lower is better)
Translates to: GSCGLKRFLCEDKWTSRPSSLCV*MNDSLG
Trigger: ACCTAAGCTATCATTCATCCACACACAAAGTGAAGA...AGGTCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428530.5
3UTR-3UTR TCA 90 bp GGGGCTATGTTGTATACAATGTTAACAAGAACATATCTTCTCTGCATATATGTGAACATTCTTCTTGGTTaGGGGATCCACGCCCTTGTT +
Preference number: 2 (lower is better)
Translates to: GAMLYTMLTRTYLLCIYVNILLG*GIHALV
Trigger: AACAAGGGCGTGGATCCCTCAACCAAGAAGAATGTT...CACATATATGCAGAGAAGATATGTTCTTGTTAACATTGTATACAACATAGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR CAA 90 bp GCCTTTAAAGAGCTTATCCTCAGAAATAAGCTTCGTCTTGAGTTGTaGAACTACAAAACACTATTTTCTGCAGTCATCCGAAGAATTGTG +
Preference number: 2 (lower is better)
Translates to: AFKELILRNKLRLEL*NYKTLFSAVIRRIV
Trigger: CACAATTCTTCGGATGACTGCAGAAAATAGTGTTTTGTAGTTCAACAACTCAAGACGAAGCTTATTTCTGAGGATAAGCTCTTTAAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR TCA 90 bp GGGGCTATGTTGTATACAATGTTAACAAGAACATATCTTCTCTGCATATATGTGGCAGTACAGGTCACTTaGAGACATAAACATTCTTCT +
Preference number: 2 (lower is better)
Translates to: GAMLYTMLTRTYLLCIYVAVQVT*RHKHSS
Trigger: AGAAGAATGTTTATGTCTTCAAGTGACCTGTACTGC...CACATATATGCAGAGAAGATATGTTCTTGTTAACATTGTATACAACATAGCCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR CAA 90 bp TTTGCCTTTAAAGAGCTTATCCTCAGAAATAAGCTTCGTCTTGAGTaGTTGAACTACAAAACACTATTTTCTGCAGTCATCCGAAGAATT +
Preference number: 2 (lower is better)
Translates to: FAFKELILRNKLRLE*LNYKTLFSAVIRRI
Trigger: AATTCTTCGGATGACTGCAGAAAATAGTGTTTTGTAGTTCAACAACTCAAGACGAAGCTTATTTCTGAGGATAAGCTCTTTAAAGGCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR GCA 90 bp GGGGCTATGTTGTATACAATGTTAACAAGAACATATCTTCTCTGCATATATGTGCAAAACACTATTTTCTaGAGTCATCCGAAGAATTGT +
Preference number: 2 (lower is better)
Translates to: GAMLYTMLTRTYLLCIYVQNTIF*SHPKNC
Trigger: ACAATTCTTCGGATGACTGCAGAAAATAGTGTTTTG...CACATATATGCAGAGAAGATATGTTCTTGTTAACATTGTATACAACATAGCCCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR CCA 72 bp CAGAGTCTCCCTGAGCCTGACTTTGCCAGACCTTCTTaGGTTTGGCCTCCGGGAGAGCAGCCCAGTCTCTGG +
Preference number: 3 (lower is better)
Translates to: QSLPEPDFARPS*VWPPGEQPSLW
Trigger: CCAGAGACTGGGCTGCTCTCCCGGAGGCCAAACCCAAGAAGGTCTGGCAAAGTCAGGCTCAGGGAGACTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR CCA 72 bp ACGGGGCCGCAGCAAAAGCCATCCTGGGCCTTCGACTaGGCCATGTCTTCAGGAAGATTCCTGAAGAGGAGG +
Preference number: 3 (lower is better)
Translates to: TGPQQKPSWAFD*AMSSGRFLKRR
Trigger: CCTCCTCTTCAGGAATCTTCCTGAAGACATGGCCCAGTCGAAGGCCCAGGATGGCTTTTGCTGCGGCCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR TCA 72 bp CAAAGTCAGTGGTCGGCCGCTTCGACCAACATGTGGTaGGCATTCCACGGGCGCATGAAGTCTGGGTGCTGT +
Preference number: 3 (lower is better)
Translates to: QSQWSAASTNMW*AFHGRMKSGCC
Trigger: ACAGCACCCAGACTTCATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCCGACCACTGACTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR GCA 72 bp TGTCTTGAGACCCCTCTGTTTTCAAGGAGAGCTCTATaGAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGC +
Preference number: 3 (lower is better)
Translates to: CLETPLFSRRAL*SVCPHRGLQQG
Trigger: GCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGCTCTCCTTGAAAACAGAGGGGTCTCAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CAA 90 bp AGGCAGAATGTCTTGAGACCCCTCTGTTTTCAAGGAGAGCTCTATGCAGCGTGTCAGACCTTCTTGGGTTaGGCCTCCGGGAGAGCAGCC +
Preference number: 3 (lower is better)
Translates to: RQNVLRPLCFQGELYAACQTFLG*ASGRAA
Trigger: GGCTGCTCTCCCGGAGGCCAAACCCAAGAAGGTCTG...ACACGCTGCATAGAGCTCTCCTTGAAAACAGAGGGGTCTCAAGACATTCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CAA 90 bp AAGTCAGTGGTCGGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATCTGCTGGTCATGTCCTaGGCAGTCTTTTGTGCAAAA +
Preference number: 3 (lower is better)
Translates to: KSVVGRFDQHVVSIPRAHLLVMS*AVFCAK
Trigger: TTTTGCACAAAAGACTGCCAAGGACATGACCAGCAG...ATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCCGACCACTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CAA 90 bp AGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTCCCTGTCTCCAGGAGCATGCGTaGGGATGTCCGGATGACCGG +
Preference number: 3 (lower is better)
Translates to: RIVPLLVMPLNVEADSPCLQEHA*GCPDDR
Trigger: CCGGTCATCCGGACATCCCAACGCATGCTCCTGGAG...ACAGGGAGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR TCA 72 bp GGGCCTTCGACTGGGCCATGTCTTCAGGAAGATTCCTaGAGAGGAGGGCCCGAAATACCTGCCTTTATAGGT +
Preference number: 3 (lower is better)
Translates to: GPSTGPCLQEDS*RGGPEIPAFIG
Trigger: ACCTATAAAGGCAGGTATTTCGGGCCCTCCTCTTCAGGAATCTTCCTGAAGACATGGCCCAGTCGAAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CAA 90 bp CGTGAGCTCCTTTCCTCAGTCATGGCCACAGTTGTATCATATAGCATCTCTAACCTCCAGGAGCATGCGTaGGGATGTCCGGATGACCGG +
Preference number: 3 (lower is better)
Translates to: RELLSSVMATVVSYSISNLQEHA*GCPDDR
Trigger: CCGGTCATCCGGACATCCCAACGCATGCTCCTGGAG...GTTAGAGATGCTATATGATACAACTGTGGCCATGACTGAGGAAAGGAGCTCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR TCA 72 bp CTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATaGAGTCTGGGTGCTGTGCTCGAGTCTCTGAATATT +
Preference number: 3 (lower is better)
Translates to: LRPTCGEHSTGA*SLGAVLESLNI
Trigger: AATATTCAGAGACTCGAGCACAGCACCCAGACTTCATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CAA 90 bp GCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCCTGCAAAATAAGGCATATTaGAGCTCCACATTAACCTTG +
Preference number: 3 (lower is better)
Translates to: ALCSVCPHRGLQQGRVSLQNKAY*SSTLTL
Trigger: CAAGGTTAATGTGGAGCTCAAATATGCCTTATTTTG...CAGGGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CAA 90 bp AGAGCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCCAAAATAAGGCATATTaGAGCTCCACATTAACCTTG +
Preference number: 3 (lower is better)
Translates to: RALCSVCPHRGLQQGRVSQNKAY*SSTLTL
Trigger: CAAGGTTAATGTGGAGCTCAAATATGCCTTATTTTG...GGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CAA 90 bp ATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTCTGCTGGTCATGTCCTaGGCAGTCTTTTGTGCAAAA +
Preference number: 3 (lower is better)
Translates to: IRRIVPLLVMPLNVEADSLLVMS*AVFCAK
Trigger: TTTTGCACAAAAGACTGCCAAGGACATGACCAGCAG...AGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CAA 90 bp CGTGAGCTCCTTTCCTCAGTCATGGCCACAGTTGTATCATATAGCATCTCTAACCTGCTGGTCATGTCCTaGGCAGTCTTTTGTGCAAAA +
Preference number: 3 (lower is better)
Translates to: RELLSSVMATVVSYSISNLLVMS*AVFCAK
Trigger: TTTTGCACAAAAGACTGCCAAGGACATGACCAGCAG...GTTAGAGATGCTATATGATACAACTGTGGCCATGACTGAGGAAAGGAGCTCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CAA 90 bp GTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTCCCTGTCTCTCTGAGTCTCTGAATATTTaGATAGGAAGCGACAAGAAA +
Preference number: 3 (lower is better)
Translates to: VPLLVMPLNVEADSPCLSESLNI*IGSDKK
Trigger: TTTCTTGTCGCTTCCTATCAAAATATTCAGAGACTC...AGAGAGACAGGGAGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CAA 90 bp TTAAAGGTTTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGGAGTCTCTGAATATTTaGATAGGAAGCGACAAGAAA +
Preference number: 3 (lower is better)
Translates to: LKVFLFSIKPVRTVRGVGESLNI*IGSDKK
Trigger: TTTCTTGTCGCTTCCTATCAAAATATTCAGAGACTC...CCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAAACCTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CAA 90 bp ATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTGTCCTTGGCAGTCTTTaGTGCAAAATAAGGCATATT +
Preference number: 3 (lower is better)
Translates to: IRRIVPLLVMPLNVEADSVLGSL*CKIRHI
Trigger: AATATGCCTTATTTTGCACAAAAGACTGCCAAGGAC...AGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR TCA 72 bp TACAGGTCACTTGAAGACATAAACATTCTTCTTGGTTaGGGGATCCACGCCCTTGTTTCAGAAATGACACCA +
Preference number: 3 (lower is better)
Translates to: YRSLEDINILLG*GIHALVSEMTP
Trigger: TGGTGTCATTTCTGAAACAAGGGCGTGGATCCCTCAACCAAGAAGAATGTTTATGTCTTCAAGTGACCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CAA 90 bp ATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTCAAAATAAGGCATATTaGAGCTCCACATTAACCTTG +
Preference number: 3 (lower is better)
Translates to: IRRIVPLLVMPLNVEADSQNKAY*SSTLTL
Trigger: CAAGGTTAATGTGGAGCTCAAATATGCCTTATTTTG...AGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR TCA 72 bp ATTTTCTCCAATAGTCCCCAAGCAGTACAGGTCACTTaGAGACATAAACATTCTTCTTGGTTGAGGGATCCA +
Preference number: 3 (lower is better)
Translates to: IFSNSPQAVQVT*RHKHSSWLRDP
Trigger: TGGATCCCTCAACCAAGAAGAATGTTTATGTCTTCAAGTGACCTGTACTGCTTGGGGACTATTGGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CAA 90 bp AAACATTCTTCTTGGTTGAGGGATCCACGCCCTTGTTTCAGAAATGACACCACACAAAATAAGGCATATTaGAGCTCCACATTAACCTTG +
Preference number: 3 (lower is better)
Translates to: KHSSWLRDPRPCFRNDTTQNKAY*SSTLTL
Trigger: CAAGGTTAATGTGGAGCTCAAATATGCCTTATTTTG...TGTGGTGTCATTTCTGAAACAAGGGCGTGGATCCCTCAACCAAGAAGAATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
3UTR-3UTR CAA 90 bp GGGGCTATGTTGTATACAATGTTAACAAGAACATATCTTCTCTGCATATATGTGCTGCTGGTCATGTCCTaGGCAGTCTTTTGTGCAAAA +
Preference number: 3 (lower is better)
Translates to: GAMLYTMLTRTYLLCIYVLLVMS*AVFCAK
Trigger: TTTTGCACAAAAGACTGCCAAGGACATGACCAGCAG...CACATATATGCAGAGAAGATATGTTCTTGTTAACATTGTATACAACATAGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
CDS-3UTR GCA 90 bp CCTGACTTTGCCAGACCTTCTTGGGTTTGGCCTCCGGGAGAGCAGCCCAGTCTCGCAACCGGGGCACGCTaGTTGGCAGGCTGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: PDFARPSWVWPPGEQPSLATGAR*LAGWAR
Trigger: GCGCGCCCAGCCTGCCAAGCAGCGTGCCCCGGTTGC...GAGACTGGGCTGCTCTCCCGGAGGCCAAACCCAAGAAGGTCTGGCAAAGTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp GCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCCTGCCGCTGCATGACGCCTaGAACCGGGGCACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: ALCSVCPHRGLQQGRVSLPLHDA*NRGTLL
Trigger: AAGCAGCGTGCCCCGGTTGCAGGCGTCATGCAGCGG...CAGGGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp TTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGGTGAAGCGTGTCGCGCCCGCTGCATaGCGCCTGCAACCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: FLFSIKPVRTVRGVGVKRVAPAA*RLQPGH
Trigger: GTGCCCCGGTTGCAGGCGTCATGCAGCGGGCGCGAC...ACGCTTCACCCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp AGAGCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCCAGACACCCGGTGCGTaGTGGAGACGGACGGGCTCT +
Preference number: 4 (lower is better)
Translates to: RALCSVCPHRGLQQGRVSQTPGA*WRRTGS
Trigger: AGAGCCCGTCCGTCTCCAGCACGCACCGGGTGTCTG...GGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp GGGAGTGGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACTGGAGCTGGCGGCGCTaGCAGCAGGTAGGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: GSGGEACSLHRQHSRLSHWSWRR*QQVGAQ
Trigger: CTGCGCGCCTACCTGCTGCCAGCGCCGCCAGCTCCA...GTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCCACTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp CCACACTTGTTTGGTTGGGTTGATGGGGTCTCCCTCTCCCTGCACCCTTCTGAGCTGGGGAAGGGCCAGTaGCCACGCCCAGCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: PHLFGWVDGVSLSLHPSELGKGQ*PRPAPE
Trigger: CTCAGGGGCTGGGCGTGGCCACTGGCCCTTCCCCAG...CTCAGAAGGGTGCAGGGAGAGGGAGACCCCATCAACCCAACCAAACAAGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR GCA 90 bp AGAGCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCGTCCACACCGAGGTCTaGAGCAGGGCAGAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: RALCSVCPHRGLQQGRVSVHTEV*SRAESP
Trigger: GGGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGAC...GGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp AGAGCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCCACGGCGCGAAGCTGTaGAATCCAGGCAGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: RALCSVCPHRGLQQGRVSHGAKL*NPGRKR
Trigger: CCGCTTCCTGCCTGGATTCCACAGCTTCGCGCCGTG...GGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp AAGTCAGTGGTCGGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATACACCCGGTGCGTGCTaGAGACGGACGGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: KSVVGRFDQHVVSIPRAHTPGAC*RRTGSP
Trigger: TGGAGAGCCCGTCCGTCTCCAGCACGCACCGGGTGT...ATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCCGACCACTGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp GCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCCTGCTCACTAGCATTTCCTaGAGCTGGCGGCGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ALCSVCPHRGLQQGRVSLLTSIS*SWRRWQ
Trigger: CTGCCAGCGCCGCCAGCTCCAGGAAATGCTAGTGAG...CAGGGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381086.9
CDS-3UTR TCA 90 bp CCCTCTCCCTGCACCCTTCTGAGGGCTCTGTCCTATTTGCTTTGCTCTTTCTGGGCCACGCCCAGCCCCTaGGGCTGGTCCAAGGACAGT +
Preference number: 4 (lower is better)
Translates to: PSPCTLLRALSYLLCSFWATPSP*GWSKDS
Trigger: ACTGTCCTTGGACCAGCCTCAGGGGCTGGGCGTGGC...CCAGAAAGAGCAAAGCAAATAGGACAGAGCCCTCAGAAGGGTGCAGGGAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR GCA 90 bp TTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGGTGAAGCGTCTGGCCCTCGCTCAGTaGGCACGTCAGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: FLFSIKPVRTVRGVGVKRLALAQ*ARQAAA
Trigger: GGCTGCTGCCTGACGTGCGCACTGAGCGAGGGCCAG...ACGCTTCACCCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381083.9
CDS-3UTR GCA 90 bp CTTCCCCACACTTGTTTGGTTGGGTTGATGGGGTCTCCCTCTCCCTGCACCCTTACGGGCTCTCCACACTaGCGGCGCTGCGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LPHTCLVGLMGSPSPCTLTGSPH*RRCGLP
Trigger: AGGAAGACCGCAGCGCCGGCAGTGTGGAGAGCCCGT...AAGGGTGCAGGGAGAGGGAGACCCCATCAACCCAACCAAACAAGTGTGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR GCA 90 bp CTTCCCCACACTTGTTTGGTTGGGTTGATGGGGTCTCCCTCTCCCTGCACCCTTCAGACACCCGGTGCGTaGTGGAGACGGACGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LPHTCLVGLMGSPSPCTLQTPGA*WRRTGS
Trigger: AGAGCCCGTCCGTCTCCAGCACGCACCGGGTGTCTG...AAGGGTGCAGGGAGAGGGAGACCCCATCAACCCAACCAAACAAGTGTGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR CCA 90 bp GGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACAAAGTCCTGGGCGCGCAGGGATaGGGCGACAGTACACGGCGC +
Preference number: 4 (lower is better)
Translates to: GGEACSLHRQHSRLSHKVLGAQG*GDSTRR
Trigger: GCGCCGTGTACTGTCGCCCCATCCCTGCGCGCCCAG...GACTTTGTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp CCACACTTGTTTGGTTGGGTTGATGGGGTCTCCCTCTCCCTGCACCCTTCTGAGACACCCGGTGCGTGCTaGAGACGGACGGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PHLFGWVDGVSLSLHPSETPGAC*RRTGSP
Trigger: TGGAGAGCCCGTCCGTCTCCAGCACGCACCGGGTGT...CTCAGAAGGGTGCAGGGAGAGGGAGACCCCATCAACCCAACCAAACAAGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR CCA 90 bp AGAGCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCTCCAGGAGCATGCGTTaGGATGTCCGGATGACCGGG +
Preference number: 4 (lower is better)
Translates to: RALCSVCPHRGLQQGRVSSRSMR*DVRMTG
Trigger: CCCGGTCATCCGGACATCCCAACGCATGCTCCTGGA...GGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp GCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCCTGCAGCAAAAGCCATCCTaGGCCTTCGACTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: ALCSVCPHRGLQQGRVSLQQKPS*AFDWAM
Trigger: CATGGCCCAGTCGAAGGCCCAGGATGGCTTTTGCTG...CAGGGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp AGAGCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCAGCATTTCCTGGAGCTaGCGGCGCTGGCAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: RALCSVCPHRGLQQGRVSSISWS*RRWQQV
Trigger: TACCTGCTGCCAGCGCCGCCAGCTCCAGGAAATGCT...GGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381086.9
CDS-3UTR CCA 90 bp ATAAAGCAGAGTGTCCCTGAGGTGCACTGGCCGGCCTCCTTCCCCACACTTGTTGTCCCTGAGGTGCACTaGCCGGCCTCCTTCCCCACA +
Preference number: 4 (lower is better)
Translates to: IKQSVPEVHWPASFPTLVVPEVH*PASFPT
Trigger: TGTGGGGAAGGAGGCCGGCCAGTGCACCTCAGGGAC...AACAAGTGTGGGGAAGGAGGCCGGCCAGTGCACCTCAGGGACACTCTGCTTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR TCA 90 bp GGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATGAAGTCTGGGTGTCGACCAACATGTGGTaGGCATTCCACGGGCGCATG +
Preference number: 4 (lower is better)
Translates to: GRFDQHVVSIPRAHEVWVSTNMW*AFHGRM
Trigger: CATGCGCCCGTGGAATGCTCACCACATGTTGGTCGA...CACCCAGACTTCATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp AGTCACAAAGTCAGTGGTCGGCCGCTTCGACCAACATGTGGTGAGCATTCCACGCCGCTGCATGACGCCTaGAACCGGGGCACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SHKVSGRPLRPTCGEHSTPLHDA*NRGTLL
Trigger: AAGCAGCGTGCCCCGGTTGCAGGCGTCATGCAGCGG...CGTGGAATGCTCACCACATGTTGGTCGAAGCGGCCGACCACTGACTTTGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp TTAAAGGTTTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGCGCGCACTGGGCCAGTaGACGCGCGTCGCACGGCTC +
Preference number: 4 (lower is better)
Translates to: LKVFLFSIKPVRTVRGVGRALGQ*TRVARL
Trigger: GAGCCGTGCGACGCGCGTGCACTGGCCCAGTGCGCG...CCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAAACCTTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381083.9
CDS-3UTR GCA 90 bp TTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGGTGAAGCGCCACACTGCCGGCGCTaGGGTCTTCCTCCGACTCAC +
Preference number: 4 (lower is better)
Translates to: FPILDKACAHCTGSGGEAPHCRR*GLPPTH
Trigger: GTGAGTCGGAGGAAGACCGCAGCGCCGGCAGTGTGG...CGCTTCACCCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp CCTGACTTTGCCAGACCTTCTTGGGTTTGGCCTCCGGGAGAGCAGCCCAGTCTCAGAAGCCCCGCTTCCTaGCTTTGGAAGGGCGACACT +
Preference number: 4 (lower is better)
Translates to: PDFARPSWVWPPGEQPSLRSPAS*LWKGDT
Trigger: AGTGTCGCCCTTCCAAAGGCAGGAAGCGGGGCTTCT...GAGACTGGGCTGCTCTCCCGGAGGCCAAACCCAAGAAGGTCTGGCAAAGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp AAGTCAGTGGTCGGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATCGTCCTCCTTCCCCTTaGTGGTGTAGCCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: KSVVGRFDQHVVSIPRAHRPPSP*WCSLGE
Trigger: CTCTCCCAGGCTACACCACCAAGGGGAAGGAGGACG...ATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCCGACCACTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp GGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATGAAGTCTGGGTGCAGCAAAAGCCATCCTaGGCCTTCGACTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: GRFDQHVVSIPRAHEVWVQQKPS*AFDWAM
Trigger: CATGGCCCAGTCGAAGGCCCAGGATGGCTTTTGCTG...CACCCAGACTTCATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp AGAGCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCTCCCAGTGTCCTGGATaGGCTCCCCAGCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: RALCSVCPHRGLQQGRVSSQCPG*APQQAI
Trigger: AATGGCTTGCTGGGGAGCCCATCCAGGACACTGGGA...GGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp TTAAAGGTTTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGCAGGCAGGAAGCGGCTaGTCCTCAGCGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LKVFLFSIKPVRTVRGVGQAGSG*SSAPSR
Trigger: GCGGCTGGGCGCTGAGGATCAGCCGCTTCCTGCCTG...CCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAAACCTTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp GGGTTTAAAGGTTTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGTCGCGCCCGCTGCATaGCGCCTGCAACCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GFKGFPILDKACAHCTGSVAPAA*RLQPGH
Trigger: GTGCCCCGGTTGCAGGCGTCATGCAGCGGGCGCGAC...ACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAAACCTTTAAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp AAGTCAGTGGTCGGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATCACCACAGAAGGCTGTaGGCTCCAGGAGCATGCGTT +
Preference number: 4 (lower is better)
Translates to: KSVVGRFDQHVVSIPRAHHHRRL*APGACV
Trigger: AACGCATGCTCCTGGAGCTCACAGCCTTCTGTGGTG...ATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCCGACCACTGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp AAGTCAGTGGTCGGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATCCCAGTCTCTGGGCGTaGGCTCCTTTCCTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: KSVVGRFDQHVVSIPRAHPSLWA*APFLSH
Trigger: ATGACTGAGGAAAGGAGCTCACGCCCAGAGACTGGG...ATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCCGACCACTGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp TCTCCCTGCACCCTTCTGAGGGCTCTGTCCTATTTGCTTTGCTCTTTCTGGCCCAAAGCAGAGTGTCCCTaGGGTGCACTGGCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SPCTLLRALSYLLCSFWPKAECP*GALAGL
Trigger: GAGGCCGGCCAGTGCACCTCAGGGACACTCTGCTTT...GGGCCAGAAAGAGCAAAGCAAATAGGACAGAGCCCTCAGAAGGGTGCAGGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR GCA 90 bp AGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTCCCTGTGCAACCGGGGCACGCTaGTTGGCAGGCTGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: RIVPLLVMPLNVEADSPCATGAR*LAGWAR
Trigger: GCGCGCCCAGCCTGCCAAGCAGCGTGCCCCGGTTGC...ACAGGGAGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp GGGTTTAAAGGTTTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTCCGTCCAGCAGCGCCTaGAGCGGTCGCGCCTCGTCG +
Preference number: 4 (lower is better)
Translates to: GFKGFPILDKACAHCTGSPSSSA*SGRASS
Trigger: CGACGAGGCGCGACCGCTGCAGGCGCTGCTGGACGG...ACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAAACCTTTAAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381083.9
CDS-3UTR GCA 90 bp GGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATGAAGTCTGGGTGCGGCAGGCGTCTACTTaGTCTGCATGCTGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: GRFDQHVVSIPRAHEVWVRQAST*SACCSS
Trigger: ACTGCTACAGCATGCAGAGCAAGTAGACGCCTGCCG...CACCCAGACTTCATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp TCTCCCTGCACCCTTCTGAGGGCTCTGTCCTATTTGCTTTGCTCTTTCTGGCCCGGAGGGGGTGGAACTTaGGATCAGACACCCGGTGCG +
Preference number: 4 (lower is better)
Translates to: SPCTLLRALSYLLCSFWPGGGGT*DQTPGA
Trigger: CGCACCGGGTGTCTGATCCCAAGTTCCACCCCCTCC...GGGCCAGAAAGAGCAAAGCAAATAGGACAGAGCCCTCAGAAGGGTGCAGGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR CCA 90 bp AGAGCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCCCCGCTTCCTGCCTTTaGAAGGGCGACACTGCTTTT +
Preference number: 4 (lower is better)
Translates to: RALCSVCPHRGLQQGRVSPASCL*KGDTAF
Trigger: AAAAGCAGTGTCGCCCTTCCAAAGGCAGGAAGCGGG...GGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp GGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATGAAGTCTGGGTGCCCGCTTCCTGCCTTTaGAAGGGCGACACTGCTTTT +
Preference number: 4 (lower is better)
Translates to: GRFDQHVVSIPRAHEVWVPASCL*KGDTAF
Trigger: AAAAGCAGTGTCGCCCTTCCAAAGGCAGGAAGCGGG...CACCCAGACTTCATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp CCACACTTGTTTGGTTGGGTTGATGGGGTCTCCCTCTCCCTGCACCCTTCTGAGCCTCCTTCCCCTTGGTaGTGTAGCCTGGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PHLFGWVDGVSLSLHPSEPPSPW*CSLGEA
Trigger: AGCCTCTCCCAGGCTACACCACCAAGGGGAAGGAGG...CTCAGAAGGGTGCAGGGAGAGGGAGACCCCATCAACCCAACCAAACAAGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR CCA 90 bp CCACACTTGTTTGGTTGGGTTGATGGGGTCTCCCTCTCCCTGCACCCTTCTGAGCGTCCTCCTTCCCCTTaGTGGTGTAGCCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PHLFGWVDGVSLSLHPSERPPSP*WCSLGE
Trigger: CTCTCCCAGGCTACACCACCAAGGGGAAGGAGGACG...CTCAGAAGGGTGCAGGGAGAGGGAGACCCCATCAACCCAACCAAACAAGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR TCA 90 bp TTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGGTGAAGCGTCATTCCACGGGCGCATaGAGTCTGGGTGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: FLFSIKPVRTVRGVGVKRHSTGA*SLGAVL
Trigger: GAGCACAGCACCCAGACTTCATGCGCCCGTGGAATG...ACGCTTCACCCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp GGGAGTGGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACCACCACAGAAGGCTGTaGGCTCCAGGAGCATGCGTT +
Preference number: 4 (lower is better)
Translates to: GSGGEACSLHRQHSRLSHHHRRL*APGACV
Trigger: AACGCATGCTCCTGGAGCTCACAGCCTTCTGTGGTG...GTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCCACTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp CCTGACTTTGCCAGACCTTCTTGGGTTTGGCCTCCGGGAGAGCAGCCCAGTCTCTCTGAATGTGGAGGCTaGCTCTCCCTGTCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: PDFARPSWVWPPGEQPSLSECGG*LSLSLC
Trigger: ACAGAGAGACAGGGAGAGTCAGCCTCCACATTCAGA...GAGACTGGGCTGCTCTCCCGGAGGCCAAACCCAAGAAGGTCTGGCAAAGTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp GGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATGAAGTCTGGGTGCGCATGAAGTCTGGGTaGTGTGCTCGAGTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: GRFDQHVVSIPRAHEVWVRMKSG*CARVSE
Trigger: TTCAGAGACTCGAGCACAGCACCCAGACTTCATGCG...CACCCAGACTTCATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp GGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATGAAGTCTGGGTGTCAAGGAGAGCTCTATaGAGCGTGTGTCCACACCGA +
Preference number: 4 (lower is better)
Translates to: GRFDQHVVSIPRAHEVWVSRRAL*SVCPHR
Trigger: TCGGTGTGGACACACGCTGCATAGAGCTCTCCTTGA...CACCCAGACTTCATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp AGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTCCCTGTCTGGGCGCGCAGGGATaGGGCGACAGTACACGGCGC +
Preference number: 4 (lower is better)
Translates to: RIVPLLVMPLNVEADSPCLGAQG*GDSTRR
Trigger: GCGCCGTGTACTGTCGCCCCATCCCTGCGCGCCCAG...ACAGGGAGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp TTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGGTGAAGCGTCGTCCTCCTTCCCCTTaGTGGTGTAGCCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: FLFSIKPVRTVRGVGVKRRPPSP*WCSLGE
Trigger: CTCTCCCAGGCTACACCACCAAGGGGAAGGAGGACG...ACGCTTCACCCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp CAGCAAAAGCCATCCTGGGCCTTCGACTGGGCCATGTCTTCAGGAAGATTCCTGCGGGCGCATGAAGTCTaGGTGCTGTGCTCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: QQKPSWAFDWAMSSGRFLRAHEV*VLCSSL
Trigger: GAGACTCGAGCACAGCACCCAGACTTCATGCGCCCG...CAGGAATCTTCCTGAAGACATGGCCCAGTCGAAGGCCCAGGATGGCTTTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp GGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACAAAGTCGTGCTCCCAGTGTCCTaGATGGGCTCCCCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: GGEACSLHRQHSRLSHKVVLPVS*MGSPAS
Trigger: GCTTGCTGGGGAGCCCATCCAGGACACTGGGAGCAC...GACTTTGTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp TTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGGTGAAGCGCCCAGTCTCTGGGCGTaGGCTCCTTTCCTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: FPILDKACAHCTGSGGEAPSLWA*APFLSH
Trigger: ATGACTGAGGAAAGGAGCTCACGCCCAGAGACTGGG...CGCTTCACCCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp TCTCCCTGCACCCTTCTGAGGGCTCTGTCCTATTTGCTTTGCTCTTTCTGGCCCAGAAGCCCCGCTTCCTaGCTTTGGAAGGGCGACACT +
Preference number: 4 (lower is better)
Translates to: SPCTLLRALSYLLCSFWPRSPAS*LWKGDT
Trigger: AGTGTCGCCCTTCCAAAGGCAGGAAGCGGGGCTTCT...GGGCCAGAAAGAGCAAAGCAAATAGGACAGAGCCCTCAGAAGGGTGCAGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR GCA 90 bp GGGAGTGGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACCGGCAGGCGTCTACTTaGTCTGCATGCTGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: GSGGEACSLHRQHSRLSHRQAST*SACCSS
Trigger: ACTGCTACAGCATGCAGAGCAAGTAGACGCCTGCCG...GTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCCACTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp CCTGACTTTGCCAGACCTTCTTGGGTTTGGCCTCCGGGAGAGCAGCCCAGTCTCTTTGAATGGAGGGGGTaGAACTTGGGATCAGACACC +
Preference number: 4 (lower is better)
Translates to: PDFARPSWVWPPGEQPSLFEWRG*NLGSDT
Trigger: GGTGTCTGATCCCAAGTTCCACCCCCTCCATTCAAA...GAGACTGGGCTGCTCTCCCGGAGGCCAAACCCAAGAAGGTCTGGCAAAGTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp AGAGCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCATTCTGTCTCCCGCTTaGACTCGGAGGAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: RALCSVCPHRGLQQGRVSILSPA*TRRRSS
Trigger: AGAACTTCTCCTCCGAGTCCAAGCGGGAGACAGAAT...GGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp CTTCCCCACACTTGTTTGGTTGGGTTGATGGGGTCTCCCTCTCCCTGCACCCTTCCCGCTTCCTGCCTTTaGAAGGGCGACACTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LPHTCLVGLMGSPSPCTLPASCL*KGDTAF
Trigger: AAAAGCAGTGTCGCCCTTCCAAAGGCAGGAAGCGGG...AAGGGTGCAGGGAGAGGGAGACCCCATCAACCCAACCAAACAAGTGTGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR CCA 90 bp TTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGGTGAAGCGTCCCAGTGTCCTGGATaGGCTCCCCAGCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: FPILDKACAHCTGSGGEASQCPG*APQQAI
Trigger: AATGGCTTGCTGGGGAGCCCATCCAGGACACTGGGA...CGCTTCACCCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp GGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACAAAGTCAGACCTTCTTGGGTTTaGCCTCCGGGAGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GGEACSLHRQHSRLSHKVRPSWV*PPGEQP
Trigger: GGGCTGCTCTCCCGGAGGCCAAACCCAAGAAGGTCT...GACTTTGTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp CCCTCTCCCTGCACCCTTCTGAGGGCTCTGTCCTATTTGCTTTGCTCTTTCTGGCTGAGCTGCAGCTCCTaGGTCTGTAAGCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: PSPCTLLRALSYLLCSFWLSCSS*VCKPGE
Trigger: TTCCCCAGGCTTACAGACCCAGGAGCTGCAGCTCAG...CCAGAAAGAGCAAAGCAAATAGGACAGAGCCCTCAGAAGGGTGCAGGGAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR TCA 90 bp GTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTCCCTGTCTCTCTCATTCCACGGGCGCATaGAGTCTGGGTGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: VPLLVMPLNVEADSPCLSHSTGA*SLGAVL
Trigger: GAGCACAGCACCCAGACTTCATGCGCCCGTGGAATG...AGAGAGACAGGGAGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp CCCTCTCCCTGCACCCTTCTGAGGGCTCTGTCCTATTTGCTTTGCTCTTTCTGGCTTGTTTGGTTGGGTTaGTGGGGTCTCCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PSPCTLLRALSYLLCSFWLVWLG*WGLPLP
Trigger: AGGGAGAGGGAGACCCCATCAACCCAACCAAACAAG...CCAGAAAGAGCAAAGCAAATAGGACAGAGCCCTCAGAAGGGTGCAGGGAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR GCA 90 bp AGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTCCCTGTACGGGCTCTCCACACTaGCGGCGCTGCGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RIVPLLVMPLNVEADSPCTGSPH*RRCGLP
Trigger: AGGAAGACCGCAGCGCCGGCAGTGTGGAGAGCCCGT...ACAGGGAGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp AAGTCAGTGGTCGGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATTCTACTTGCTCTGCATaGTGTAGCAGTGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: KSVVGRFDQHVVSIPRAHSTCSA*CSSARP
Trigger: AGGACGTGCACTGCTACAGCATGCAGAGCAAGTAGA...ATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCCGACCACTGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp CCCTCTCCCTGCACCCTTCTGAGGGCTCTGTCCTATTTGCTTTGCTCTTTCTGGCGGCAGGCGTCTACTTaGTCTGCATGCTGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: PSPCTLLRALSYLLCSFWRQAST*SACCSS
Trigger: ACTGCTACAGCATGCAGAGCAAGTAGACGCCTGCCG...CCAGAAAGAGCAAAGCAAATAGGACAGAGCCCTCAGAAGGGTGCAGGGAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR GCA 90 bp TCTCCCTGCACCCTTCTGAGGGCTCTGTCCTATTTGCTTTGCTCTTTCTGGCCCCTGAGTACTCACCCTTaGGGCAGGCGTCTACTTGCT +
Preference number: 4 (lower is better)
Translates to: SPCTLLRALSYLLCSFWPLSTHP*GRRLLA
Trigger: AGCAAGTAGACGCCTGCCGCAAGGGTGAGTACTCAG...GGGCCAGAAAGAGCAAAGCAAATAGGACAGAGCCCTCAGAAGGGTGCAGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR GCA 90 bp CCCTCTCCCTGCACCCTTCTGAGGGCTCTGTCCTATTTGCTTTGCTCTTTCTGGTTTCTGGCCCTGAGCTaGAGCTCCTGGGTCTGTAAG +
Preference number: 4 (lower is better)
Translates to: PSPCTLLRALSYLLCSFWFLALS*SSWVCK
Trigger: CTTACAGACCCAGGAGCTGCAGCTCAGGGCCAGAAA...CCAGAAAGAGCAAAGCAAATAGGACAGAGCCCTCAGAAGGGTGCAGGGAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR CCA 90 bp AGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTCCCTGTACACCCGGTGCGTGCTaGAGACGGACGGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RIVPLLVMPLNVEADSPCTPGAC*RRTGSP
Trigger: TGGAGAGCCCGTCCGTCTCCAGCACGCACCGGGTGT...ACAGGGAGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp AAGTCAGTGGTCGGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATATTCTGTCTCCCGCTTaGACTCGGAGGAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: KSVVGRFDQHVVSIPRAHILSPA*TRRRSS
Trigger: AGAACTTCTCCTCCGAGTCCAAGCGGGAGACAGAAT...ATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCCGACCACTGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp TCTCCCTGCACCCTTCTGAGGGCTCTGTCCTATTTGCTTTGCTCTTTCTGGCCCCTTGGTGGTGTAGCCTaGGAGAGGCTGCCCATACTT +
Preference number: 4 (lower is better)
Translates to: SPCTLLRALSYLLCSFWPLGGVA*ERLPIL
Trigger: AAGTATGGGCAGCCTCTCCCAGGCTACACCACCAAG...GGGCCAGAAAGAGCAAAGCAAATAGGACAGAGCCCTCAGAAGGGTGCAGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR CCA 90 bp CAGCAAAAGCCATCCTGGGCCTTCGACTGGGCCATGTCTTCAGGAAGATTCCTGGCTGTAGCCAGCTGCTaGTCATGTCCTTGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: QQKPSWAFDWAMSSGRFLAVASC*SCPWQS
Trigger: AGACTGCCAAGGACATGACCAGCAGCTGGCTACAGC...CAGGAATCTTCCTGAAGACATGGCCCAGTCGAAGGCCCAGGATGGCTTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp ATAAAGCAGAGTGTCCCTGAGGTGCACTGGCCGGCCTCCTTCCCCACACTTGTTCCACACTTGTTTGGTTaGGTTGATGGGGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: IKQSVPEVHWPASFPTLVPHLFG*VDGVSL
Trigger: GAGGGAGACCCCATCAACCCAACCAAACAAGTGTGG...AACAAGTGTGGGGAAGGAGGCCGGCCAGTGCACCTCAGGGACACTCTGCTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR GCA 90 bp ATAAAGCAGAGTGTCCCTGAGGTGCACTGGCCGGCCTCCTTCCCCACACTTGTTGGGCTCTGTCCTATTTaGTTTGCTCTTTCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: IKQSVPEVHWPASFPTLVGLCPI*FALSGP
Trigger: AGGGCCAGAAAGAGCAAAGCAAATAGGACAGAGCCC...AACAAGTGTGGGGAAGGAGGCCGGCCAGTGCACCTCAGGGACACTCTGCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR CCA 90 bp AGCATGAGAATGACTCTAAGTTCAACAAACATGGGTGAATCTCTATGTGCTCCCTGGAGCTGGCGGCGCTaGCAGCAGGTAGGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: SMRMTLSSTNMGESLCAPWSWRR*QQVGAQ
Trigger: CTGCGCGCCTACCTGCTGCCAGCGCCGCCAGCTCCA...GGGAGCACATAGAGATTCACCCATGTTTGTTGAACTTAGAGTCATTCTCATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp AAACATTCTTCTTGGTTGAGGGATCCACGCCCTTGTTTCAGAAATGACACCACACGGCTCACCTGGAGCTaGCGGCGCTGGCAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: KHSSWLRDPRPCFRNDTTRLTWS*RRWQQV
Trigger: TACCTGCTGCCAGCGCCGCCAGCTCCAGGTGAGCCG...TGTGGTGTCATTTCTGAAACAAGGGCGTGGATCCCTCAACCAAGAAGAATGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381083.9
CDS-3UTR CCA 90 bp CTTCCCCACACTTGTTTGGTTGGGTTGATGGGGTCTCCCTCTCCCTGCACCCTTTTTGAATGGAGGGGGTaGAACTTGGGATCAGACACC +
Preference number: 4 (lower is better)
Translates to: LPHTCLVGLMGSPSPCTLFEWRG*NLGSDT
Trigger: GGTGTCTGATCCCAAGTTCCACCCCCTCCATTCAAA...AAGGGTGCAGGGAGAGGGAGACCCCATCAACCCAACCAAACAAGTGTGGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR CCA 90 bp ATAAAGCAGAGTGTCCCTGAGGTGCACTGGCCGGCCTCCTTCCCCACACTTGTTATTCTGTCTCCCGCTTaGACTCGGAGGAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: IKQSVPEVHWPASFPTLVILSPA*TRRRSS
Trigger: AGAACTTCTCCTCCGAGTCCAAGCGGGAGACAGAAT...AACAAGTGTGGGGAAGGAGGCCGGCCAGTGCACCTCAGGGACACTCTGCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR CCA 90 bp CTTCCCCACACTTGTTTGGTTGGGTTGATGGGGTCTCCCTCTCCCTGCACCCTTCCTTCTTGTCACAGTTaGGAATGTGTACACCCCTGG +
Preference number: 4 (lower is better)
Translates to: LPHTCLVGLMGSPSPCTLPSCHS*ECVHPW
Trigger: CCAGGGGTGTACACATTCCCAACTGTGACAAGAAGG...AAGGGTGCAGGGAGAGGGAGACCCCATCAACCCAACCAAACAAGTGTGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR CCA 90 bp GGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACAAAGTCTCCTGGGCCTTCGACTaGGCCATGTCTTCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GGEACSLHRQHSRLSHKVSWAFD*AMSSGR
Trigger: TCTTCCTGAAGACATGGCCCAGTCGAAGGCCCAGGA...GACTTTGTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp ACTATTTTCTGCAGTCATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAACAGGCAGGAAGCGGCTaGTCCTCAGCGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TIFCSHPKNCAITCDASEQAGSG*SSAPSR
Trigger: GCGGCTGGGCGCTGAGGATCAGCCGCTTCCTGCCTG...TTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGATGACTGCAGAAAATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp GGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATGAAGTCTGGGTGGATGATGATTATCTTTaGATGGAGGGGGTGGAACTT +
Preference number: 4 (lower is better)
Translates to: GRFDQHVVSIPRAHEVWVDDDYL*MEGVEL
Trigger: AAGTTCCACCCCCTCCATTCAAAGATAATCATCATC...CACCCAGACTTCATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp GGGAGTGGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACTGGGACTCAGCACATTaGGGAACTTCAGGTGATTCA +
Preference number: 4 (lower is better)
Translates to: GSGGEACSLHRQHSRLSHWDSAH*GTSGDS
Trigger: TGAATCACCTGAAGTTCCTCAATGTGCTGAGTCCCA...GTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCCACTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp CTTCCCCACACTTGTTTGGTTGGGTTGATGGGGTCTCCCTCTCCCTGCACCCTTTGGGACTCAGCACATTaGGGAACTTCAGGTGATTCA +
Preference number: 4 (lower is better)
Translates to: LPHTCLVGLMGSPSPCTLWDSAH*GTSGDS
Trigger: TGAATCACCTGAAGTTCCTCAATGTGCTGAGTCCCA...AAGGGTGCAGGGAGAGGGAGACCCCATCAACCCAACCAAACAAGTGTGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR GCA 90 bp GGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGACCTCAGACACCCGGTGCGTaGTGGAGACGGACGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GSCGLKRFLCEDKWTSRPQTPGA*WRRTGS
Trigger: AGAGCCCGTCCGTCTCCAGCACGCACCGGGTGTCTG...AGGTCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR GCA 90 bp TCTCCCTGCACCCTTCTGAGGGCTCTGTCCTATTTGCTTTGCTCTTTCTGGCCCTCTACTTGCTCTGCATaGTGTAGCAGTGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: SPCTLLRALSYLLCSFWPSTCSA*CSSARP
Trigger: AGGACGTGCACTGCTACAGCATGCAGAGCAAGTAGA...GGGCCAGAAAGAGCAAAGCAAATAGGACAGAGCCCTCAGAAGGGTGCAGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR GCA 90 bp CAGCAAAAGCCATCCTGGGCCTTCGACTGGGCCATGTCTTCAGGAAGATTCCTGAGGGCCCGAAATACCTaGCTTTATAGGTTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: QQKPSWAFDWAMSSGRFLRARNT*LYRFPE
Trigger: CTCTGGGAACCTATAAAGGCAGGTATTTCGGGCCCT...CAGGAATCTTCCTGAAGACATGGCCCAGTCGAAGGCCCAGGATGGCTTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp AGCTTTGCCTTTAAAGAGCTTATCCTCAGAAATAAGCTTCGTCTTGAGTTGTTGCGCTGCTTGGCAGGCTaGGCGCGCAGGGATGGGGCG +
Preference number: 4 (lower is better)
Translates to: SFAFKELILRNKLRLELLRCLAG*ARRDGA
Trigger: CGCCCCATCCCTGCGCGCCCAGCCTGCCAAGCAGCG...CAACAACTCAAGACGAAGCTTATTTCTGAGGATAAGCTCTTTAAAGGCAAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp ACTATTTTCTGCAGTCATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAATCGTCGGGCGACGGCTaGCAGCGAAGGCCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: TIFCSHPKNCAITCDASESSGDG*QRRPEP
Trigger: TGGCTCCGGCCTTCGCTGCCAGCCGTCGCCCGACGA...TTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGATGACTGCAGAAAATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381083.9
CDS-3UTR CCA 90 bp GGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGACCTACACCCGGTGCGTGCTaGAGACGGACGGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GSCGLKRFLCEDKWTSRPTPGAC*RRTGSP
Trigger: TGGAGAGCCCGTCCGTCTCCAGCACGCACCGGGTGT...AGGTCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR CCA 90 bp ATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTGGAGGGGGTGGAACTTaGGATCAGACACCCGGTGCG +
Preference number: 4 (lower is better)
Translates to: IRRIVPLLVMPLNVEADSGGGGT*DQTPGA
Trigger: CGCACCGGGTGTCTGATCCCAAGTTCCACCCCCTCC...AGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp TTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGGTGAAGCGTTTTGAATGGAGGGGGTaGAACTTGGGATCAGACACC +
Preference number: 4 (lower is better)
Translates to: FLFSIKPVRTVRGVGVKRFEWRG*NLGSDT
Trigger: GGTGTCTGATCCCAAGTTCCACCCCCTCCATTCAAA...ACGCTTCACCCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp TTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGGTGAAGCGTCCTTCTTGTCACAGTTaGGAATGTGTACACCCCTGG +
Preference number: 4 (lower is better)
Translates to: FLFSIKPVRTVRGVGVKRPSCHS*ECVHPW
Trigger: CCAGGGGTGTACACATTCCCAACTGTGACAAGAAGG...ACGCTTCACCCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp GGGTTTAAAGGTTTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTCCTCCTTCCCCTTGGTaGTGTAGCCTGGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GFKGFPILDKACAHCTGSPPSPW*CSLGEA
Trigger: AGCCTCTCCCAGGCTACACCACCAAGGGGAAGGAGG...ACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAAACCTTTAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp GTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTCCCTGTCTCTCTTTTGCCAGACCTTCTTaGGTTTGGCCTCCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: VPLLVMPLNVEADSPCLSFARPS*VWPPGE
Trigger: CTCTCCCGGAGGCCAAACCCAAGAAGGTCTGGCAAA...AGAGAGACAGGGAGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp AAGTCAGTGGTCGGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATTTGAGGAACTTCAGGTaGTTCAGTGTGTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: KSVVGRFDQHVVSIPRAHLRNFR*FSVSSI
Trigger: AATGGAAGACACACTGAATCACCTGAAGTTCCTCAA...ATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCCGACCACTGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp GGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATGAAGTCTGGGTGCTGACTACTGGAAAGTaGAAAGATGCTCAAGTTTAC +
Preference number: 4 (lower is better)
Translates to: GRFDQHVVSIPRAHEVWVLTTGK*KDAQVY
Trigger: GTAAACTTGAGCATCTTTTCACTTTCCAGTAGTCAG...CACCCAGACTTCATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp TTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGGTGAAGCGTAACATTCTTCTTGGTTaGGGGATCCACGCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: FLFSIKPVRTVRGVGVKRNILLG*GIHALV
Trigger: AACAAGGGCGTGGATCCCTCAACCAAGAAGAATGTT...ACGCTTCACCCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp TCTGGGTGCTGTGCTCGAGTCTCTGAATATTTTGATAGGAAGCGACAAGAAAATCCACACTGCCGGCGCTaGGGTCTTCCTCCGACTCAC +
Preference number: 4 (lower is better)
Translates to: SGCCARVSEYFDRKRQENPHCRR*GLPPTH
Trigger: GTGAGTCGGAGGAAGACCGCAGCGCCGGCAGTGTGG...ATTTTCTTGTCGCTTCCTATCAAAATATTCAGAGACTCGAGCACAGCACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp AGCATGAGAATGACTCTAAGTTCAACAAACATGGGTGAATCTCTATGTGCTCCCCAGACACCCGGTGCGTaGTGGAGACGGACGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SMRMTLSSTNMGESLCAPQTPGA*WRRTGS
Trigger: AGAGCCCGTCCGTCTCCAGCACGCACCGGGTGTCTG...GGGAGCACATAGAGATTCACCCATGTTTGTTGAACTTAGAGTCATTCTCATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp CCTGACTTTGCCAGACCTTCTTGGGTTTGGCCTCCGGGAGAGCAGCCCAGTCTCTGGCTGTCTTTAGCATaGCCTTTCTTGATGATGATT +
Preference number: 4 (lower is better)
Translates to: PDFARPSWVWPPGEQPSLWLSLA*PFLMMI
Trigger: AATCATCATCAAGAAAGGGCATGCTAAAGACAGCCA...GAGACTGGGCTGCTCTCCCGGAGGCCAAACCCAAGAAGGTCTGGCAAAGTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp AGAGCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCTGGCTGTCTTTAGCATaGCCTTTCTTGATGATGATT +
Preference number: 4 (lower is better)
Translates to: RALCSVCPHRGLQQGRVSWLSLA*PFLMMI
Trigger: AATCATCATCAAGAAAGGGCATGCTAAAGACAGCCA...GGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp ATAAAGCAGAGTGTCCCTGAGGTGCACTGGCCGGCCTCCTTCCCCACACTTGTTAGTTCTGGGTATCTGTaGTCTGAGACTCGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: IKQSVPEVHWPASFPTLVSSGYL*SETRSQ
Trigger: TTGACTACGAGTCTCAGAGCACAGATACCCAGAACT...AACAAGTGTGGGGAAGGAGGCCGGCCAGTGCACCTCAGGGACACTCTGCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR GCA 90 bp AGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTCCCTGTAGAAGCCCCGCTTCCTaGCTTTGGAAGGGCGACACT +
Preference number: 4 (lower is better)
Translates to: RIVPLLVMPLNVEADSPCRSPAS*LWKGDT
Trigger: AGTGTCGCCCTTCCAAAGGCAGGAAGCGGGGCTTCT...ACAGGGAGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp GGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACAAAGTCAGGGCCCGAAATACCTaGCTTTATAGGTTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GGEACSLHRQHSRLSHKVRARNT*LYRFPE
Trigger: CTCTGGGAACCTATAAAGGCAGGTATTTCGGGCCCT...GACTTTGTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp TTAAAGGTTTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGCTTGGTGGTGTAGCCTaGGAGAGGCTGCCCATACTT +
Preference number: 4 (lower is better)
Translates to: LKVFLFSIKPVRTVRGVGLGGVA*ERLPIL
Trigger: AAGTATGGGCAGCCTCTCCCAGGCTACACCACCAAG...CCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAAACCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp CGTGAGCTCCTTTCCTCAGTCATGGCCACAGTTGTATCATATAGCATCTCTAACCCTCCTTCCCCTTGGTaGTGTAGCCTGGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RELLSSVMATVVSYSISNPPSPW*CSLGEA
Trigger: AGCCTCTCCCAGGCTACACCACCAAGGGGAAGGAGG...GTTAGAGATGCTATATGATACAACTGTGGCCATGACTGAGGAAAGGAGCTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp ATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTCGGGCGCATGAAGTCTaGGTGCTGTGCTCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: IRRIVPLLVMPLNVEADSRAHEV*VLCSSL
Trigger: GAGACTCGAGCACAGCACCCAGACTTCATGCGCCCG...AGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp AAACATTCTTCTTGGTTGAGGGATCCACGCCCTTGTTTCAGAAATGACACCACAGTGCTCCCAGTGTCCTaGATGGGCTCCCCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: KHSSWLRDPRPCFRNDTTVLPVS*MGSPAS
Trigger: GCTTGCTGGGGAGCCCATCCAGGACACTGGGAGCAC...TGTGGTGTCATTTCTGAAACAAGGGCGTGGATCCCTCAACCAAGAAGAATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp ATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTAGACCTTCTTGGGTTTaGCCTCCGGGAGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: IRRIVPLLVMPLNVEADSRPSWV*PPGEQP
Trigger: GGGCTGCTCTCCCGGAGGCCAAACCCAAGAAGGTCT...AGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp GGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACAAAGTCAACATTCTTCTTGGTTaGGGGATCCACGCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: GGEACSLHRQHSRLSHKVNILLG*GIHALV
Trigger: AACAAGGGCGTGGATCCCTCAACCAAGAAGAATGTT...GACTTTGTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp TTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGGTGAAGCGTTCAACAAACATGGGTaGATCTCTATGTGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: FPILDKACAHCTGSGGEAFNKHG*ISMCSQ
Trigger: CTGGGAGCACATAGAGATTCACCCATGTTTGTTGAA...CGCTTCACCCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp CAGCAAAAGCCATCCTGGGCCTTCGACTGGGCCATGTCTTCAGGAAGATTCCTGTTCAACAAACATGGGTaGATCTCTATGTGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QQKPSWAFDWAMSSGRFLFNKHG*ISMCSQ
Trigger: CTGGGAGCACATAGAGATTCACCCATGTTTGTTGAA...CAGGAATCTTCCTGAAGACATGGCCCAGTCGAAGGCCCAGGATGGCTTTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp ACTATTTTCTGCAGTCATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAAACGGGCTCTCCACACTaGCGGCGCTGCGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TIFCSHPKNCAITCDASETGSPH*RRCGLP
Trigger: AGGAAGACCGCAGCGCCGGCAGTGTGGAGAGCCCGT...TTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGATGACTGCAGAAAATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp AGCATGAGAATGACTCTAAGTTCAACAAACATGGGTGAATCTCTATGTGCTCCCCACGGCGCGAAGCTGTaGAATCCAGGCAGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: SMRMTLSSTNMGESLCAPHGAKL*NPGRKR
Trigger: CCGCTTCCTGCCTGGATTCCACAGCTTCGCGCCGTG...GGGAGCACATAGAGATTCACCCATGTTTGTTGAACTTAGAGTCATTCTCATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp GGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGACCTCCTCCTTCCCCTTGGTaGTGTAGCCTGGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GSCGLKRFLCEDKWTSRPPPSPW*CSLGEA
Trigger: AGCCTCTCCCAGGCTACACCACCAAGGGGAAGGAGG...AGGTCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR CCA 90 bp GGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGACCTCGTCCTCCTTCCCCTTaGTGGTGTAGCCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GSCGLKRFLCEDKWTSRPRPPSP*WCSLGE
Trigger: CTCTCCCAGGCTACACCACCAAGGGGAAGGAGGACG...AGGTCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR TCA 90 bp CCCTCTCCCTGCACCCTTCTGAGGGCTCTGTCCTATTTGCTTTGCTCTTTCTGGTTGAGGAACTTCAGGTaGTTCAGTGTGTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: PSPCTLLRALSYLLCSFWLRNFR*FSVSSI
Trigger: AATGGAAGACACACTGAATCACCTGAAGTTCCTCAA...CCAGAAAGAGCAAAGCAAATAGGACAGAGCCCTCAGAAGGGTGCAGGGAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR GCA 90 bp GGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACAAAGTCAGTTCTGGGTATCTGTaGTCTGAGACTCGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: GGEACSLHRQHSRLSHKVSSGYL*SETRSQ
Trigger: TTGACTACGAGTCTCAGAGCACAGATACCCAGAACT...GACTTTGTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp GCAGGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGAAGAAGCCCCGCTTCCTaGCTTTGGAAGGGCGACACT +
Preference number: 4 (lower is better)
Translates to: AGSCGLKRFLCEDKWTSRRSPAS*LWKGDT
Trigger: AGTGTCGCCCTTCCAAAGGCAGGAAGCGGGGCTTCT...TCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR GCA 90 bp GGGAGTGGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACTATAGGTTCCCAGAGTaGCCTAGAACATTCTTAGAT +
Preference number: 4 (lower is better)
Translates to: GSGGEACSLHRQHSRLSHYRFPE*PRTFLD
Trigger: ATCTAAGAATGTTCTAGGGCACTCTGGGAACCTATA...GTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCCACTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp ACTATTTTCTGCAGTCATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAAGGAGGGGGTGGAACTTaGGATCAGACACCCGGTGCG +
Preference number: 4 (lower is better)
Translates to: TIFCSHPKNCAITCDASEGGGGT*DQTPGA
Trigger: CGCACCGGGTGTCTGATCCCAAGTTCCACCCCCTCC...TTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGATGACTGCAGAAAATAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp CCCTCTCCCTGCACCCTTCTGAGGGCTCTGTCCTATTTGCTTTGCTCTTTCTGGATGATTATCTTTGAATaGAGGGGGTGGAACTTGGGA +
Preference number: 4 (lower is better)
Translates to: PSPCTLLRALSYLLCSFWMIIFE*RGWNLG
Trigger: TCCCAAGTTCCACCCCCTCCATTCAAAGATAATCAT...CCAGAAAGAGCAAAGCAAATAGGACAGAGCCCTCAGAAGGGTGCAGGGAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR CCA 90 bp GGGTTTAAAGGTTTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTAAGTCACAAAGTCAGTaGTCGGCCGCTTCGACCAAC +
Preference number: 4 (lower is better)
Translates to: GFKGFPILDKACAHCTGSKSQSQ*SAASTN
Trigger: GTTGGTCGAAGCGGCCGACCACTGACTTTGTGACTT...ACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAAACCTTTAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp TTAAAGGTTTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGGTAGGCAGAATGTCTTaGGACCCCTCTGTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: LKVFLFSIKPVRTVRGVGVGRMS*DPSVFK
Trigger: CTTGAAAACAGAGGGGTCTCAAGACATTCTGCCTAC...CCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAAACCTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp CCCTCTCCCTGCACCCTTCTGAGGGCTCTGTCCTATTTGCTTTGCTCTTTCTGGTGGCTGTCTTTAGCATaGCCTTTCTTGATGATGATT +
Preference number: 4 (lower is better)
Translates to: PSPCTLLRALSYLLCSFWWLSLA*PFLMMI
Trigger: AATCATCATCAAGAAAGGGCATGCTAAAGACAGCCA...CCAGAAAGAGCAAAGCAAATAGGACAGAGCCCTCAGAAGGGTGCAGGGAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR GCA 90 bp GGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGACCTGCTGTGAGGTATCCTTaGGGCAGGCGTCTACTTGCT +
Preference number: 4 (lower is better)
Translates to: GSCGLKRFLCEDKWTSRPAVRYP*GRRLLA
Trigger: AGCAAGTAGACGCCTGCCGCAAGGATACCTCACAGC...AGGTCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR CCA 90 bp AGCTTTGCCTTTAAAGAGCTTATCCTCAGAAATAAGCTTCGTCTTGAGTTGTTGCTCACTAGCATTTCCTaGCGCGGGCGGCTCACCTGG +
Preference number: 4 (lower is better)
Translates to: SFAFKELILRNKLRLELLLTSIS*RGRLTW
Trigger: CCAGGTGAGCCGCCCGCGCCAGGAAATGCTAGTGAG...CAACAACTCAAGACGAAGCTTATTTCTGAGGATAAGCTCTTTAAAGGCAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381083.9
CDS-3UTR CCA 90 bp GCAGGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGACCCGCTTCCTGCCTTTaGAAGGGCGACACTGCTTTT +
Preference number: 4 (lower is better)
Translates to: AGSCGLKRFLCEDKWTSRPASCL*KGDTAF
Trigger: AAAAGCAGTGTCGCCCTTCCAAAGGCAGGAAGCGGG...TCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR CCA 90 bp GGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGACCTCTTGGTGGTGTAGCCTaGGAGAGGCTGCCCATACTT +
Preference number: 4 (lower is better)
Translates to: GSCGLKRFLCEDKWTSRPLGGVA*ERLPIL
Trigger: AAGTATGGGCAGCCTCTCCCAGGCTACACCACCAAG...AGGTCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR CCA 90 bp GCGACAAGAAAATTCAAACTGCTCTTTGCTGACTACTGGAAAGTGAAAAGATGCTCCAGGAGCATGCGTTaGGATGTCCGGATGACCGGG +
Preference number: 4 (lower is better)
Translates to: ATRKFKLLFADYWKVKRCSRSMR*DVRMTG
Trigger: CCCGGTCATCCGGACATCCCAACGCATGCTCCTGGA...GCATCTTTTCACTTTCCAGTAGTCAGCAAAGAGCAGTTTGAATTTTCTTGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp TTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGGTGAAGCGTACAAAGCCCAGAGATaGTCAATAACAAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: FPILDKACAHCTGSGGEAYKAQR*SITKGK
Trigger: CTTTCCCTTTGTTATTGACCATCTCTGGGCTTTGTA...CGCTTCACCCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp ACTATTTTCTGCAGTCATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAATCGACCAACATGTGGTaGGCATTCCACGGGCGCATG +
Preference number: 4 (lower is better)
Translates to: TIFCSHPKNCAITCDASESTNMW*AFHGRM
Trigger: CATGCGCCCGTGGAATGCTCACCACATGTTGGTCGA...TTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGATGACTGCAGAAAATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp GGGTTTAAAGGTTTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGTAGGCAGAATGTCTTaGGACCCCTCTGTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: GFKGFPILDKACAHCTGSVGRMS*DPSVFK
Trigger: CTTGAAAACAGAGGGGTCTCAAGACATTCTGCCTAC...ACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAAACCTTTAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp ATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTTCTACTTGCTCTGCATaGTGTAGCAGTGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: IRRIVPLLVMPLNVEADSSTCSA*CSSARP
Trigger: AGGACGTGCACTGCTACAGCATGCAGAGCAAGTAGA...AGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp AAACATGTATCTTTAGCAGGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATGGAGGGGGTGGAACTTaGGATCAGACACCCGGTGCG +
Preference number: 4 (lower is better)
Translates to: KHVSLAGSCGLKRFLCEDGGGGT*DQTPGA
Trigger: CGCACCGGGTGTCTGATCCCAAGTTCCACCCCCTCC...ATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACCTGCTAAAGATACATGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR CCA 90 bp GGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACAAAGTCTCCTTTCCTCAGTCATaGCCACAGTTGTATCATATA +
Preference number: 4 (lower is better)
Translates to: GGEACSLHRQHSRLSHKVSFPQS*PQLYHI
Trigger: TATATGATACAACTGTGGCCATGACTGAGGAAAGGA...GACTTTGTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp CGTGAGCTCCTTTCCTCAGTCATGGCCACAGTTGTATCATATAGCATCTCTAACTGGGACTCAGCACATTaGGGAACTTCAGGTGATTCA +
Preference number: 4 (lower is better)
Translates to: RELLSSVMATVVSYSISNWDSAH*GTSGDS
Trigger: TGAATCACCTGAAGTTCCTCAATGTGCTGAGTCCCA...GTTAGAGATGCTATATGATACAACTGTGGCCATGACTGAGGAAAGGAGCTCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp GTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTCCCTGTCTCTCTGCAGTACAGGTCACTTaGAGACATAAACATTCTTCT +
Preference number: 4 (lower is better)
Translates to: VPLLVMPLNVEADSPCLSAVQVT*RHKHSS
Trigger: AGAAGAATGTTTATGTCTTCAAGTGACCTGTACTGC...AGAGAGACAGGGAGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp GGGTTTAAAGGTTTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTAGTTCTGGGTATCTGTaGTCTGAGACTCGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: GFKGFPILDKACAHCTGSSSGYL*SETRSQ
Trigger: TTGACTACGAGTCTCAGAGCACAGATACCCAGAACT...ACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAAACCTTTAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp GGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGACCTTCTACTTGCTCTGCATaGTGTAGCAGTGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: GSCGLKRFLCEDKWTSRPSTCSA*CSSARP
Trigger: AGGACGTGCACTGCTACAGCATGCAGAGCAAGTAGA...AGGTCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR GCA 90 bp CAGCAAAAGCCATCCTGGGCCTTCGACTGGGCCATGTCTTCAGGAAGATTCCTGCAAAACACTATTTTCTaGAGTCATCCGAAGAATTGT +
Preference number: 4 (lower is better)
Translates to: QQKPSWAFDWAMSSGRFLQNTIF*SHPKNC
Trigger: ACAATTCTTCGGATGACTGCAGAAAATAGTGTTTTG...CAGGAATCTTCCTGAAGACATGGCCCAGTCGAAGGCCCAGGATGGCTTTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp GGGGCTATGTTGTATACAATGTTAACAAGAACATATCTTCTCTGCATATATGTGGTCCACACCGAGGTCTaGAGCAGGGCAGAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: GAMLYTMLTRTYLLCIYVVHTEV*SRAESP
Trigger: GGGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGAC...CACATATATGCAGAGAAGATATGTTCTTGTTAACATTGTATACAACATAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp GGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGACCTTTTGAATGGAGGGGGTaGAACTTGGGATCAGACACC +
Preference number: 4 (lower is better)
Translates to: GSCGLKRFLCEDKWTSRPFEWRG*NLGSDT
Trigger: GGTGTCTGATCCCAAGTTCCACCCCCTCCATTCAAA...AGGTCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR CCA 90 bp GGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGACCTATTCTGTCTCCCGCTTaGACTCGGAGGAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: GSCGLKRFLCEDKWTSRPILSPA*TRRRSS
Trigger: AGAACTTCTCCTCCGAGTCCAAGCGGGAGACAGAAT...AGGTCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR CCA 90 bp GCAGGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGACCTTCTTGTCACAGTTaGGAATGTGTACACCCCTGG +
Preference number: 4 (lower is better)
Translates to: AGSCGLKRFLCEDKWTSRPSCHS*ECVHPW
Trigger: CCAGGGGTGTACACATTCCCAACTGTGACAAGAAGG...TCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR CCA 90 bp GCGACAAGAAAATTCAAACTGCTCTTTGCTGACTACTGGAAAGTGAAAAGATGCCTTGGTGGTGTAGCCTaGGAGAGGCTGCCCATACTT +
Preference number: 4 (lower is better)
Translates to: ATRKFKLLFADYWKVKRCLGGVA*ERLPIL
Trigger: AAGTATGGGCAGCCTCTCCCAGGCTACACCACCAAG...GCATCTTTTCACTTTCCAGTAGTCAGCAAAGAGCAGTTTGAATTTTCTTGTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp ACTATTTTCTGCAGTCATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAAGCTGTAGCCAGCTGCTaGTCATGTCCTTGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: TIFCSHPKNCAITCDASEAVASC*SCPWQS
Trigger: AGACTGCCAAGGACATGACCAGCAGCTGGCTACAGC...TTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGATGACTGCAGAAAATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp GCGACAAGAAAATTCAAACTGCTCTTTGCTGACTACTGGAAAGTGAAAAGATGCTTTGCCAGACCTTCTTaGGTTTGGCCTCCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: ATRKFKLLFADYWKVKRCFARPS*VWPPGE
Trigger: CTCTCCCGGAGGCCAAACCCAAGAAGGTCTGGCAAA...GCATCTTTTCACTTTCCAGTAGTCAGCAAAGAGCAGTTTGAATTTTCTTGTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp GCAGGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGACTCTGTGAAGATAAATaGACCTCCAGACCTCACGGG +
Preference number: 4 (lower is better)
Translates to: AGSCGLKRFLCEDKWTSRLCEDK*TSRPHG
Trigger: CCCGTGAGGTCTGGAGGTCCATTTATCTTCACAGAG...TCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR TCA 90 bp GGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGACCTTGGGACTCAGCACATTaGGGAACTTCAGGTGATTCA +
Preference number: 4 (lower is better)
Translates to: GSCGLKRFLCEDKWTSRPWDSAH*GTSGDS
Trigger: TGAATCACCTGAAGTTCCTCAATGTGCTGAGTCCCA...AGGTCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR TCA 90 bp TCTGGGTGCTGTGCTCGAGTCTCTGAATATTTTGATAGGAAGCGACAAGAAAATGTTGGGATGTCCGGATaGCCGGGGTTTAAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: SGCCARVSEYFDRKRQENVGMSG*PGFKGF
Trigger: AAAACCTTTAAACCCCGGTCATCCGGACATCCCAAC...ATTTTCTTGTCGCTTCCTATCAAAATATTCAGAGACTCGAGCACAGCACCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp TCTGGGTGCTGTGCTCGAGTCTCTGAATATTTTGATAGGAAGCGACAAGAAAATCTTCAGGAAGATTCCTaGAGAGGAGGGCCCGAAATA +
Preference number: 4 (lower is better)
Translates to: SGCCARVSEYFDRKRQENLQEDS*RGGPEI
Trigger: TATTTCGGGCCCTCCTCTTCAGGAATCTTCCTGAAG...ATTTTCTTGTCGCTTCCTATCAAAATATTCAGAGACTCGAGCACAGCACCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp GCGACAAGAAAATTCAAACTGCTCTTTGCTGACTACTGGAAAGTGAAAAGATGCCGCATGAAGTCTGGGTaGTGTGCTCGAGTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: ATRKFKLLFADYWKVKRCRMKSG*CARVSE
Trigger: TTCAGAGACTCGAGCACAGCACCCAGACTTCATGCG...GCATCTTTTCACTTTCCAGTAGTCAGCAAAGAGCAGTTTGAATTTTCTTGTCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp ACTATTTTCTGCAGTCATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAATCAAGGAGAGCTCTATaGAGCGTGTGTCCACACCGA +
Preference number: 4 (lower is better)
Translates to: TIFCSHPKNCAITCDASESRRAL*SVCPHR
Trigger: TCGGTGTGGACACACGCTGCATAGAGCTCTCCTTGA...TTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGATGACTGCAGAAAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp TCTGGGTGCTGTGCTCGAGTCTCTGAATATTTTGATAGGAAGCGACAAGAAAATCCTTCTTGTCACAGTTaGGAATGTGTACACCCCTGG +
Preference number: 4 (lower is better)
Translates to: SGCCARVSEYFDRKRQENPSCHS*ECVHPW
Trigger: CCAGGGGTGTACACATTCCCAACTGTGACAAGAAGG...ATTTTCTTGTCGCTTCCTATCAAAATATTCAGAGACTCGAGCACAGCACCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
3UTR CAA 72 bp CTGGGCGTGAGCTCCTTTCCTCAGTCATGGCCACAGTaGTATCATATAGCATCTCTAACATTTCATCTAGGA +
Preference number: 4 (lower is better)
Translates to: LGVSSFPQSWPQ*YHIASLTFHLG
Trigger: TCCTAGATGAAATGTTAGAGATGCTATATGATACAACTGTGGCCATGACTGAGGAAAGGAGCTCACGCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275521.10
ENST00000381083.9
ENST00000381086.9
ENST00000613132.4
CDS-3UTR TCA 90 bp GGGTTTAAAGGTTTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTCTGACTACTGGAAAGTaGAAAGATGCTCAAGTTTAC +
Preference number: 4 (lower is better)
Translates to: GFKGFPILDKACAHCTGSLTTGK*KDAQVY
Trigger: GTAAACTTGAGCATCTTTTCACTTTCCAGTAGTCAG...ACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAAACCTTTAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp GGGTTTAAAGGTTTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGCAGTACAGGTCACTTaGAGACATAAACATTCTTCT +
Preference number: 4 (lower is better)
Translates to: GFKGFPILDKACAHCTGSAVQVT*RHKHSS
Trigger: AGAAGAATGTTTATGTCTTCAAGTGACCTGTACTGC...ACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAAACCTTTAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp GCAGGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGAAGTTCTGGGTATCTGTaGTCTGAGACTCGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: AGSCGLKRFLCEDKWTSRSSGYL*SETRSQ
Trigger: TTGACTACGAGTCTCAGAGCACAGATACCCAGAACT...TCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR GCA 90 bp AAACATGTATCTTTAGCAGGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATCGGCAGGCGTCTACTTaGTCTGCATGCTGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: KHVSLAGSCGLKRFLCEDRQAST*SACCSS
Trigger: ACTGCTACAGCATGCAGAGCAAGTAGACGCCTGCCG...ATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACCTGCTAAAGATACATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR CCA 90 bp CGTGAGCTCCTTTCCTCAGTCATGGCCACAGTTGTATCATATAGCATCTCTAACTGCTGGTCATGTCCTTaGCAGTCTTTTGTGCAAAAT +
Preference number: 4 (lower is better)
Translates to: RELLSSVMATVVSYSISNCWSCP*QSFVQN
Trigger: ATTTTGCACAAAAGACTGCCAAGGACATGACCAGCA...GTTAGAGATGCTATATGATACAACTGTGGCCATGACTGAGGAAAGGAGCTCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp GCAGGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGATTGAGGAACTTCAGGTaGTTCAGTGTGTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: AGSCGLKRFLCEDKWTSRLRNFR*FSVSSI
Trigger: AATGGAAGACACACTGAATCACCTGAAGTTCCTCAA...TCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR GCA 90 bp ATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTTATAGGTTCCCAGAGTaGCCTAGAACATTCTTAGAT +
Preference number: 4 (lower is better)
Translates to: IRRIVPLLVMPLNVEADSYRFPE*PRTFLD
Trigger: ATCTAAGAATGTTCTAGGGCACTCTGGGAACCTATA...AGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp AGGCAGAATGTCTTGAGACCCCTCTGTTTTCAAGGAGAGCTCTATGCAGCGTGTCAAAACACTATTTTCTaGAGTCATCCGAAGAATTGT +
Preference number: 4 (lower is better)
Translates to: RQNVLRPLCFQGELYAACQNTIF*SHPKNC
Trigger: ACAATTCTTCGGATGACTGCAGAAAATAGTGTTTTG...ACACGCTGCATAGAGCTCTCCTTGAAAACAGAGGGGTCTCAAGACATTCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp GCAGGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGAATGATTATCTTTGAATaGAGGGGGTGGAACTTGGGA +
Preference number: 4 (lower is better)
Translates to: AGSCGLKRFLCEDKWTSRMIIFE*RGWNLG
Trigger: TCCCAAGTTCCACCCCCTCCATTCAAAGATAATCAT...TCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR CCA 90 bp ATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTTCCTTTCCTCAGTCATaGCCACAGTTGTATCATATA +
Preference number: 4 (lower is better)
Translates to: IRRIVPLLVMPLNVEADSSFPQS*PQLYHI
Trigger: TATATGATACAACTGTGGCCATGACTGAGGAAAGGA...AGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR GCA 90 bp GCAGGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGATGGCTGTCTTTAGCATaGCCTTTCTTGATGATGATT +
Preference number: 4 (lower is better)
Translates to: AGSCGLKRFLCEDKWTSRWLSLA*PFLMMI
Trigger: AATCATCATCAAGAAAGGGCATGCTAAAGACAGCCA...TCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR GCA 90 bp GGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGACCTTCTTTAGCAGGTTCTTaGGGATTAAAACGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GSCGLKRFLCEDKWTSRPSLAGS*GLKRFL
Trigger: GAGAAACCGTTTTAATCCGCAAGAACCTGCTAAAGA...AGGTCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR CCA 90 bp TCTGGGTGCTGTGCTCGAGTCTCTGAATATTTTGATAGGAAGCGACAAGAAAATATGATTATCTTTGAATaGAGGGGGTGGAACTTGGGA +
Preference number: 4 (lower is better)
Translates to: SGCCARVSEYFDRKRQENMIIFE*RGWNLG
Trigger: TCCCAAGTTCCACCCCCTCCATTCAAAGATAATCAT...ATTTTCTTGTCGCTTCCTATCAAAATATTCAGAGACTCGAGCACAGCACCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR TCA 90 bp GGGGCTATGTTGTATACAATGTTAACAAGAACATATCTTCTCTGCATATATGTGGTTGGGATGTCCGGATaGCCGGGGTTTAAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: GAMLYTMLTRTYLLCIYVVGMSG*PGFKGF
Trigger: AAAACCTTTAAACCCCGGTCATCCGGACATCCCAAC...CACATATATGCAGAGAAGATATGTTCTTGTTAACATTGTATACAACATAGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp ACTATTTTCTGCAGTCATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAAATGATTATCTTTGAATaGAGGGGGTGGAACTTGGGA +
Preference number: 4 (lower is better)
Translates to: TIFCSHPKNCAITCDASEMIIFE*RGWNLG
Trigger: TCCCAAGTTCCACCCCCTCCATTCAAAGATAATCAT...TTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGATGACTGCAGAAAATAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CCA 90 bp GCAGGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGATCTTCACTTTGTGTGTaGATGAATGATAGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: AGSCGLKRFLCEDKWTSRSSLCV*MNDSLG
Trigger: ACCTAAGCTATCATTCATCCACACACAAAGTGAAGA...TCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR CCA 90 bp ACTATTTTCTGCAGTCATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAATACAAAGCCCAGAGATaGTCAATAACAAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: TIFCSHPKNCAITCDASEYKAQR*SITKGK
Trigger: CTTTCCCTTTGTTATTGACCATCTCTGGGCTTTGTA...TTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGATGACTGCAGAAAATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS GCA 90 bp CACCAGCTCCGCGCACACGGCGGGCGGAGGCGCGCACTGGGCCAGTaGACGCGCGTCGCACGGCTCGCAGCGCACCACGGGACCCAAGCC +
Preference number: 5 (lower is better)
Translates to: HQLRAHGGRRRALGQ*TRVARLAAHHGTQA
Trigger: GGCTTGGGTCCCGTGGTGCGCTGCGAGCCGTGCGACGCGCGTGCACTGGCCCAGTGCGCGCCTCCGCCCGCCGTGTGCGCGGAGCTGGTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000613132.5
CDS GCA 90 bp CAGCGCAGCGGCCCAGAGCGTGGGTCGCGCCCGCTGCATGACGCCTaGAACCGGGGCACGCTGCTTGGCAGGCTGGGCGCGCAGGGATGG +
Preference number: 5 (lower is better)
Translates to: QRSGPERGSRPLHDA*NRGTLLGRLGAQGW
Trigger: CCATCCCTGCGCGCCCAGCCTGCCAAGCAGCGTGCCCCGGTTGCAGGCGTCATGCAGCGGGCGCGACCCACGCTCTGGGCCGCTGCGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000613132.5
CDS TCA 90 bp GCAGAGTCAGCGCAGCGGCCCAGAGCGTGGGTCGCGCCCGCTGCATaGCGCCTGCAACCGGGGCACGCTGCTTGGCAGGCTGGGCGCGCA +
Preference number: 5 (lower is better)
Translates to: AESAQRPRAWVAPAA*RLQPGHAAWQAGRA
Trigger: TGCGCGCCCAGCCTGCCAAGCAGCGTGCCCCGGTTGCAGGCGTCATGCAGCGGGCGCGACCCACGCTCTGGGCCGCTGCGCTGACTCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000613132.5
CDS GCA 90 bp AGCGTGGGTCGCGCCCGCTGCATGACGCCTGCAACCGGGGCACGCTaGTTGGCAGGCTGGGCGCGCAGGGATGGGGCGACAGTACACGGC +
Preference number: 5 (lower is better)
Translates to: SVGRARCMTPATGAR*LAGWARRDGATVHG
Trigger: GCCGTGTACTGTCGCCCCATCCCTGCGCGCCCAGCCTGCCAAGCAGCGTGCCCCGGTTGCAGGCGTCATGCAGCGGGCGCGACCCACGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000613132.5
CDS GCA 90 bp ACCAGCAGAGTCAGCGCAGCGGCCCAGAGCGTGGGTCGCGCCCGCTaGATGACGCCTGCAACCGGGGCACGCTGCTTGGCAGGCTGGGCG +
Preference number: 5 (lower is better)
Translates to: TSRVSAAAQSVGRAR*MTPATGARCLAGWA
Trigger: CGCCCAGCCTGCCAAGCAGCGTGCCCCGGTTGCAGGCGTCATGCAGCGGGCGCGACCCACGCTCTGGGCCGCTGCGCTGACTCTGCTGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000613132.5
CDS GCA 90 bp TGCAGCGGTCGCGCCCGCTGCATGACGCCTGCAACCGGGGCACGCTaGTTGGCAGGCTGGGCGCGCAGGGATGGGGCGACAGTACACGGC +
Preference number: 5 (lower is better)
Translates to: CSGRARCMTPATGAR*LAGWARRDGATVHG
Trigger: GCCGTGTACTGTCGCCCCATCCCTGCGCGCCCAGCCTGCCAAGCAGCGTGCCCCGGTTGCAGGCGTCATGCAGCGGGCGCGACCGCTGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381086.9
CDS CCA 90 bp GCCCGCTGCATGACGCCTGCAACCGGGGCACGCTGCTTGGCAGGCTaGGCGCGCAGGGATGGGGCGACAGTACACGGCGCGAAGCTGTGG +
Preference number: 5 (lower is better)
Translates to: ARCMTPATGARCLAG*ARRDGATVHGAKLW
Trigger: CCACAGCTTCGCGCCGTGTACTGTCGCCCCATCCCTGCGCGCCCAGCCTGCCAAGCAGCGTGCCCCGGTTGCAGGCGTCATGCAGCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.5
CDS CCA 90 bp CTCCGACTCACTAGCATTTCCTGGCGCGGGCGGCTCACCTGGAGCTaGCGGCGCTGGCAGCAGGTAGGCGCGCAGGCGGCTGACGGCACT +
Preference number: 5 (lower is better)
Translates to: LRLTSISWRGRLTWS*RRWQQVGAQAADGT
Trigger: AGTGCCGTCAGCCGCCTGCGCGCCTACCTGCTGCCAGCGCCGCCAGCTCCAGGTGAGCCGCCCGCGCCAGGAAATGCTAGTGAGTCGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381083.9
CDS CCA 90 bp GGCTGGGCGCGCAGGGATGGGGCGACAGTACACGGCGCGAAGCTGTaGAATCCAGGCAGGAAGCGGCTGATCCTCAGCGCCCAGCCGCAG +
Preference number: 5 (lower is better)
Translates to: GWARRDGATVHGAKL*NPGRKRLILSAQPQ
Trigger: CTGCGGCTGGGCGCTGAGGATCAGCCGCTTCCTGCCTGGATTCCACAGCTTCGCGCCGTGTACTGTCGCCCCATCCCTGCGCGCCCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.5
CDS CCA 90 bp ACTAGCATTTCCTGGCGCGGGCGGCTCACCTGGAGCTGGCGGCGCTaGCAGCAGGTAGGCGCGCAGGCGGCTGACGGCACTAGCGTTGAC +
Preference number: 5 (lower is better)
Translates to: TSISWRGRLTWSWRR*QQVGAQAADGTSVD
Trigger: GTCAACGCTAGTGCCGTCAGCCGCCTGCGCGCCTACCTGCTGCCAGCGCCGCCAGCTCCAGGTGAGCCGCCCGCGCCAGGAAATGCTAGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381083.9
CDS CCA 90 bp GCCTGCAACCGGGGCACGCTGCTTGGCAGGCTGGGCGCGCAGGGATaGGGCGACAGTACACGGCGCGAAGCTGTGGAATCCAGGCAGGAA +
Preference number: 5 (lower is better)
Translates to: ACNRGTLLGRLGAQG*GDSTRREAVESRQE
Trigger: TTCCTGCCTGGATTCCACAGCTTCGCGCCGTGTACTGTCGCCCCATCCCTGCGCGCCCAGCCTGCCAAGCAGCGTGCCCCGGTTGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.5
CDS-3UTR CAA 90 bp GGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATGAAGTCTGGGTGACCGGGGCACGCTGCTaGGCAGGCTGGGCGCGCAGG +
Preference number: 5 (lower is better)
Translates to: GRFDQHVVSIPRAHEVWVTGARC*AGWARR
Trigger: CCTGCGCGCCCAGCCTGCCAAGCAGCGTGCCCCGGT...CACCCAGACTTCATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS GCA 90 bp GTGAGGCCCTGGAGCCCCAGGCTGCCCCTCCTGAGTACTCACCCTTaGGGCAGGCGTCTACTTGCTCTGCATGCTGTAGCAGTGCACGTC +
Preference number: 5 (lower is better)
Translates to: VRPWSPRLPLLSTHP*GRRLLALHAVAVHV
Trigger: GACGTGCACTGCTACAGCATGCAGAGCAAGTAGACGCCTGCCGCAAGGGTGAGTACTCAGGAGGGGCAGCCTGGGGCTCCAGGGCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS CCA 90 bp TTGAATGGAGGGGGTGGAACTTGGGATCAGACACCCGGTGCGTGCTaGAGACGGACGGGCTCTCCACACTGCCGGCGCTGCGGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LNGGGGTWDQTPGAC*RRTGSPHCRRCGLP
Trigger: AGGAAGACCGCAGCGCCGGCAGTGTGGAGAGCCCGTCCGTCTCCAGCACGCACCGGGTGTCTGATCCCAAGTTCCACCCCCTCCATTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000448817.1
ENST00000460477.1
ENST00000465642.1
ENST00000613132.5
CDS-3UTR CAA 90 bp CAGCAAAAGCCATCCTGGGCCTTCGACTGGGCCATGTCTTCAGGAAGATTCCTGACCGGGGCACGCTGCTaGGCAGGCTGGGCGCGCAGG +
Preference number: 5 (lower is better)
Translates to: QQKPSWAFDWAMSSGRFLTGARC*AGWARR
Trigger: CCTGCGCGCCCAGCCTGCCAAGCAGCGTGCCCCGGT...CAGGAATCTTCCTGAAGACATGGCCCAGTCGAAGGCCCAGGATGGCTTTTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS GCA 90 bp TCTTTGAATGGAGGGGGTGGAACTTGGGATCAGACACCCGGTGCGTaGTGGAGACGGACGGGCTCTCCACACTGCCGGCGCTGCGGTCTT +
Preference number: 5 (lower is better)
Translates to: SLNGGGGTWDQTPGA*WRRTGSPHCRRCGL
Trigger: AAGACCGCAGCGCCGGCAGTGTGGAGAGCCCGTCCGTCTCCAGCACGCACCGGGTGTCTGATCCCAAGTTCCACCCCCTCCATTCAAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000448817.1
ENST00000460477.1
ENST00000465642.1
ENST00000613132.5
CDS-3UTR CAA 90 bp GCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCCTGCTCCAGGAGCATGCGTaGGGATGTCCGGATGACCGG +
Preference number: 5 (lower is better)
Translates to: ALCSVCPHRGLQQGRVSLLQEHA*GCPDDR
Trigger: CCGGTCATCCGGACATCCCAACGCATGCTCCTGGAG...CAGGGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS GCA 90 bp CAGGCTGCCCCTCCTGAGTACTCACCCTTGCGGCAGGCGTCTACTTaGTCTGCATGCTGTAGCAGTGCACGTCCTCCTTCCCCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: QAAPPEYSPLRQAST*SACCSSARPPSPWW
Trigger: CCACCAAGGGGAAGGAGGACGTGCACTGCTACAGCATGCAGAGCAAGTAGACGCCTGCCGCAAGGGTGAGTACTCAGGAGGGGCAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS GCA 90 bp CAACACAAGAGCCATGCGTGCCTAGGCCCGCTGAGTGTGCGCCTGTaGATGCGTGTGGGTGTAACTTCCTGCTCCAAGAAAGCGGGGGTG +
Preference number: 5 (lower is better)
Translates to: QHKSHACLGPLSVRL*MRVGVTSCSKKAGV
Trigger: CACCCCCGCTTTCTTGGAGCAGGAAGTTACACCCACACGCATGCACAGGCGCACACTCAGCGGGCCTAGGCACGCATGGCTCTTGTGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460209.1
CDS-3UTR CAA 90 bp AAGTCAGTGGTCGGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATTGGAGGGGGTGGAACTaGGGATCAGACACCCGGTGC +
Preference number: 5 (lower is better)
Translates to: KSVVGRFDQHVVSIPRAHWRGWN*GSDTRC
Trigger: GCACCGGGTGTCTGATCCCAAGTTCCACCCCCTCCA...ATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCCGACCACTGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS GCA 90 bp CCTCCTGAGTACTCACCCTTGCGGCAGGCGTCTACTTGCTCTGCATaGTGTAGCAGTGCACGTCCTCCTTCCCCTTGGTGGTGTAGCCTG +
Preference number: 5 (lower is better)
Translates to: PPEYSPLRQASTCSA*CSSARPPSPWWCSL
Trigger: CAGGCTACACCACCAAGGGGAAGGAGGACGTGCACTGCTACAGCATGCAGAGCAAGTAGACGCCTGCCGCAAGGGTGAGTACTCAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS CCA 90 bp CATGCTGTAGCAGTGCACGTCCTCCTTCCCCTTGGTGGTGTAGCCTaGGAGAGGCTGCCCATACTTATCCACACACCAGCAGAAGCCCCG +
Preference number: 5 (lower is better)
Translates to: HAVAVHVLLPLGGVA*ERLPILIHTPAEAP
Trigger: CGGGGCTTCTGCTGGTGTGTGGATAAGTATGGGCAGCCTCTCCCAGGCTACACCACCAAGGGGAAGGAGGACGTGCACTGCTACAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000428530.5
ENST00000460209.1
ENST00000613132.5
CDS GCA 90 bp AGGTGCTGTGAGGTATCCTTGCGGCAGGCGTCTACTTGCTCTGCATaGTGTAGCAGTGCACGTCCTCCTTCCCCTTGGTGGTGTAGCCTG +
Preference number: 5 (lower is better)
Translates to: RCCEVSLRQASTCSA*CSSARPPSPWWCSL
Trigger: CAGGCTACACCACCAAGGGGAAGGAGGACGTGCACTGCTACAGCATGCAGAGCAAGTAGACGCCTGCCGCAAGGATACCTCACAGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS GCA 90 bp GTTGCCCACCCATCAGCCAGGCGCTGGGGTTTGTTGAGTAAGAATTaGCCTCAAGAGGCTCTGAGTACCCAGGCTTGGCAGGTCTTGCCC +
Preference number: 5 (lower is better)
Translates to: VAHPSARRWGLLSKN*PQEALSTQAWQVLP
Trigger: GGGCAAGACCTGCCAAGCCTGGGTACTCAGAGCCTCTTGAGGGCAATTCTTACTCAACAAACCCCAGCGCCTGGCTGATGGGTGGGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460477.1
CDS-3UTR CAA 90 bp TTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGGTGAAGCGTCTCCAGGAGCATGCGTaGGGATGTCCGGATGACCGG +
Preference number: 5 (lower is better)
Translates to: FLFSIKPVRTVRGVGVKRLQEHA*GCPDDR
Trigger: CCGGTCATCCGGACATCCCAACGCATGCTCCTGGAG...ACGCTTCACCCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp AAGTCAGTGGTCGGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATCTTTGCCAGACCTTCTaGGGTTTGGCCTCCGGGAGA +
Preference number: 5 (lower is better)
Translates to: KSVVGRFDQHVVSIPRAHLCQTF*GLASGR
Trigger: TCTCCCGGAGGCCAAACCCAAGAAGGTCTGGCAAAG...ATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCCGACCACTGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp CTTCCCCACACTTGTTTGGTTGGGTTGATGGGGTCTCCCTCTCCCTGCACCCTTCCTGAGTACTCACCCTaGCGGCAGGCGTCTACTTGC +
Preference number: 5 (lower is better)
Translates to: LPHTCLVGLMGSPSPCTLPEYSP*RQASTC
Trigger: GCAAGTAGACGCCTGCCGCAAGGGTGAGTACTCAGG...AAGGGTGCAGGGAGAGGGAGACCCCATCAACCCAACCAAACAAGTGTGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS CCA 90 bp ACTTGCTCTGCATGCTGTAGCAGTGCACGTCCTCCTTCCCCTTGGTaGTGTAGCCTGGGAGAGGCTGCCCATACTTATCCACACACCAGC +
Preference number: 5 (lower is better)
Translates to: TCSACCSSARPPSPW*CSLGEAAHTYPHTS
Trigger: GCTGGTGTGTGGATAAGTATGGGCAGCCTCTCCCAGGCTACACCACCAAGGGGAAGGAGGACGTGCACTGCTACAGCATGCAGAGCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000428530.5
ENST00000460209.1
ENST00000613132.5
CDS-3UTR CAA 90 bp GGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATGAAGTCTGGGTGCCCTTCTTGTCACAGTaGGGAATGTGTACACCCCTG +
Preference number: 5 (lower is better)
Translates to: GRFDQHVVSIPRAHEVWVPFLSQ*GMCTPL
Trigger: CAGGGGTGTACACATTCCCAACTGTGACAAGAAGGG...CACCCAGACTTCATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp CCCTCTCCCTGCACCCTTCTGAGGGCTCTGTCCTATTTGCTTTGCTCTTTCTGGCCCCGCTTCCTGCCTTaGGAAGGGCGACACTGCTTT +
Preference number: 5 (lower is better)
Translates to: PSPCTLLRALSYLLCSFWPRFLP*EGRHCF
Trigger: AAAGCAGTGTCGCCCTTCCAAAGGCAGGAAGCGGGG...CCAGAAAGAGCAAAGCAAATAGGACAGAGCCCTCAGAAGGGTGCAGGGAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR CAA 90 bp GGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACAAAGTCCAGACCTTCTTGGGTTaGGCCTCCGGGAGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: GGEACSLHRQHSRLSHKVQTFLG*ASGRAA
Trigger: GGCTGCTCTCCCGGAGGCCAAACCCAAGAAGGTCTG...GACTTTGTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS GCA 90 bp TTGAGCTCCACATTAACCTTGCGGCAGGCGTCTACTTGCTCTGCATaGTGTAGCAGTGCACGTCCTCCTTCCCCTTGGTGGTGTAGCCTG +
Preference number: 5 (lower is better)
Translates to: LSSTLTLRQASTCSA*CSSARPPSPWWCSL
Trigger: CAGGCTACACCACCAAGGGGAAGGAGGACGTGCACTGCTACAGCATGCAGAGCAAGTAGACGCCTGCCGCAAGGTTAATGTGGAGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000460209.1
ENST00000613132.5
CDS GCA 90 bp GAGGCTGCCCATACTTATCCACACACCAGCAGAAGCCCCGCTTCCTaGCTTTGGAAGGGCGACACTGTGGGAGAGAAACAGAAGACAGAG +
Preference number: 5 (lower is better)
Translates to: EAAHTYPHTSRSPAS*LWKGDTVGEKQKTE
Trigger: CTCTGTCTTCTGTTTCTCTCCCACAGTGTCGCCCTTCCAAAGGCAGGAAGCGGGGCTTCTGCTGGTGTGTGGATAAGTATGGGCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460209.1
CDS CCA 90 bp TCTACTTGCTCTGCATGCTGTAGCAGTGCACGTCCTCCTTCCCCTTaGTGGTGTAGCCTGGGAGAGGCTGCCCATACTTATCCACACACC +
Preference number: 5 (lower is better)
Translates to: STCSACCSSARPPSP*WCSLGEAAHTYPHT
Trigger: GGTGTGTGGATAAGTATGGGCAGCCTCTCCCAGGCTACACCACCAAGGGGAAGGAGGACGTGCACTGCTACAGCATGCAGAGCAAGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000428530.5
ENST00000460209.1
ENST00000613132.5
CDS CCA 90 bp ACACCAGCAGAAGCCCCGCTTCCTGCCTTTGGAAGGGCGACACTGTaGGAGAGAAACAGAAGACAGAGAAGTGAATGCTCCTGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: TPAEAPLPAFGRATL*ERNRRQRSECSWVW
Trigger: CCAGACCCAGGAGCATTCACTTCTCTGTCTTCTGTTTCTCTCCCACAGTGTCGCCCTTCCAAAGGCAGGAAGCGGGGCTTCTGCTGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460209.1
CDS-3UTR CAA 90 bp GGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACAAAGTCCCCCGCTTCCTGCCTTaGGAAGGGCGACACTGCTTT +
Preference number: 5 (lower is better)
Translates to: GGEACSLHRQHSRLSHKVPRFLP*EGRHCF
Trigger: AAAGCAGTGTCGCCCTTCCAAAGGCAGGAAGCGGGG...GACTTTGTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp GCTCTATGCAGCGTGTGTCCACACCGAGGTCTGCAGCAGGGCAGAGTCTCCCTGCTGCTGGTCATGTCCTaGGCAGTCTTTTGTGCAAAA +
Preference number: 5 (lower is better)
Translates to: ALCSVCPHRGLQQGRVSLLLVMS*AVFCAK
Trigger: TTTTGCACAAAAGACTGCCAAGGACATGACCAGCAG...CAGGGAGACTCTGCCCTGCTGCAGACCTCGGTGTGGACACACGCTGCATAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp TTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTGGGGGTGAAGCGTCTTTGCCAGACCTTCTaGGGTTTGGCCTCCGGGAGA +
Preference number: 5 (lower is better)
Translates to: FLFSIKPVRTVRGVGVKRLCQTF*GLASGR
Trigger: TCTCCCGGAGGCCAAACCCAAGAAGGTCTGGCAAAG...ACGCTTCACCCCCACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS GCA 90 bp CTCCTGGGTCTGGTGTCAGGTCGGTGGCCAGGGCGCATGATGGTTTaGCAGCGTGACTCTGCTATGCTGAGAAAGCACAACAGAAATTTC +
Preference number: 5 (lower is better)
Translates to: LLGLVSGRWPGRMMV*QRDSAMLRKHNRNF
Trigger: GAAATTTCTGTTGTGCTTTCTCAGCATAGCAGAGTCACGCTGGCAAACCATCATGCGCCCTGGCCACCGACCTGACACCAGACCCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460209.1
CDS-3UTR CAA 90 bp AAACATTCTTCTTGGTTGAGGGATCCACGCCCTTGTTTCAGAAATGACACCACACTGACGGCACTAGCGTaGACGCAGAGCCCGCGGCCG +
Preference number: 5 (lower is better)
Translates to: KHSSWLRDPRPCFRNDTTLTALA*TQSPRP
Trigger: CGGCCGCGGGCTCTGCGTCAACGCTAGTGCCGTCAG...TGTGGTGTCATTTCTGAAACAAGGGCGTGGATCCCTCAACCAAGAAGAATGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp ATAAAGCAGAGTGTCCCTGAGGTGCACTGGCCGGCCTCCTTCCCCACACTTGTTTATTCTGTCTCCCGCTaGGACTCGGAGGAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: IKQSVPEVHWPASFPTLVYSVSR*DSEEKF
Trigger: GAACTTCTCCTCCGAGTCCAAGCGGGAGACAGAATA...AACAAGTGTGGGGAAGGAGGCCGGCCAGTGCACCTCAGGGACACTCTGCTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR CAA 90 bp TCTCCCTGCACCCTTCTGAGGGCTCTGTCCTATTTGCTTTGCTCTTTCTGGCCCACTTGTTTGGTTGGGTaGATGGGGTCTCCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: SPCTLLRALSYLLCSFWPTCLVG*MGSPSP
Trigger: GGGAGAGGGAGACCCCATCAACCCAACCAAACAAGT...GGGCCAGAAAGAGCAAAGCAAATAGGACAGAGCCCTCAGAAGGGTGCAGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS GCA 90 bp ACTGACTTCTCTGCCAAATGTGGGACTGAGAACATCCCCGCTGCCTaGGAATGTCACAGCTATGACTTTGGAGCCCACATCCAGCCTCAC +
Preference number: 5 (lower is better)
Translates to: TDFSAKCGTENIPAA*ECHSYDFGAHIQPH
Trigger: GTGAGGCTGGATGTGGGCTCCAAAGTCATAGCTGTGACATTCGCAGGCAGCGGGGATGTTCTCAGTCCCACATTTGGCAGAGAAGTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460209.1
CDS-3UTR CAA 90 bp GGGTTTAAAGGTTTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTTGGAGGGGGTGGAACTaGGGATCAGACACCCGGTGC +
Preference number: 5 (lower is better)
Translates to: GFKGFPILDKACAHCTGSWRGWN*GSDTRC
Trigger: GCACCGGGTGTCTGATCCCAAGTTCCACCCCCTCCA...ACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAAACCTTTAAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp AGTCACAAAGTCAGTGGTCGGCCGCTTCGACCAACATGTGGTGAGCATTCCACGTATTCTGTCTCCCGCTaGGACTCGGAGGAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: SHKVSGRPLRPTCGEHSTYSVSR*DSEEKF
Trigger: GAACTTCTCCTCCGAGTCCAAGCGGGAGACAGAATA...CGTGGAATGCTCACCACATGTTGGTCGAAGCGGCCGACCACTGACTTTGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp CCCTCTCCCTGCACCCTTCTGAGGGCTCTGTCCTATTTGCTTTGCTCTTTCTGGCCCTTCTTGTCACAGTaGGGAATGTGTACACCCCTG +
Preference number: 5 (lower is better)
Translates to: PSPCTLLRALSYLLCSFWPFLSQ*GMCTPL
Trigger: CAGGGGTGTACACATTCCCAACTGTGACAAGAAGGG...CCAGAAAGAGCAAAGCAAATAGGACAGAGCCCTCAGAAGGGTGCAGGGAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS-3UTR CAA 90 bp GGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACAAAGTCAGCTCCACATTAACCTaGCGGCAGGCGTCTACTTGC +
Preference number: 5 (lower is better)
Translates to: GGEACSLHRQHSRLSHKVSSTLT*RQASTC
Trigger: GCAAGTAGACGCCTGCCGCAAGGTTAATGTGGAGCT...GACTTTGTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp TCTCCCTGCACCCTTCTGAGGGCTCTGTCCTATTTGCTTTGCTCTTTCTGGCCCCTTCCCCACACTTGTTaGGTTGGGTTGATGGGGTCT +
Preference number: 5 (lower is better)
Translates to: SPCTLLRALSYLLCSFWPLPHTC*VGLMGS
Trigger: AGACCCCATCAACCCAACCAAACAAGTGTGGGGAAG...GGGCCAGAAAGAGCAAAGCAAATAGGACAGAGCCCTCAGAAGGGTGCAGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS CCA 90 bp TTAGCATGCCCTTTCTTGATGATGATTATCTTTGAATGGAGGGGGTaGAACTTGGGATCAGACACCCGGTGCGTGCTGGAGACGGACGGG +
Preference number: 5 (lower is better)
Translates to: LACPFLMMIIFEWRG*NLGSDTRCVLETDG
Trigger: CCCGTCCGTCTCCAGCACGCACCGGGTGTCTGATCCCAAGTTCCACCCCCTCCATTCAAAGATAATCATCATCAAGAAAGGGCATGCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000428530.5
ENST00000448817.1
ENST00000460477.1
ENST00000465642.1
ENST00000613132.5
CDS TCA 90 bp GCGCTGGCTGTCTTTAGCATGCCCTTTCTTGATGATGATTATCTTTaGATGGAGGGGGTGGAACTTGGGATCAGACACCCGGTGCGTGCT +
Preference number: 5 (lower is better)
Translates to: ALAVFSMPFLDDDYL*MEGVELGIRHPVRA
Trigger: AGCACGCACCGGGTGTCTGATCCCAAGTTCCACCCCCTCCATTCAAAGATAATCATCATCAAGAAAGGGCATGCTAAAGACAGCCAGCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000428530.5
ENST00000448817.1
ENST00000460477.1
ENST00000465642.1
ENST00000613132.5
CDS CCA 90 bp GTCGGGGAAACTGGCATACAGCGCTCCGCATTCGTGTGTACCTCGTaGAGCTTTCTAAAATTTAATTCCGTTGGCAGGCGAAGTCTTGGG +
Preference number: 5 (lower is better)
Translates to: VGETGIQRSAFVCTS*SFLKFNSVGRRSLG
Trigger: CCCAAGACTTCGCCTGCCAACGGAATTAAATTTTAGAAAGCTCCACGAGGTACACACGAATGCGGAGCGCTGTATGCCAGTTTCCCCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448817.1
CDS CCA 90 bp TGGCTGTCTTTAGCATGCCCTTTCTTGATGATGATTATCTTTGAATaGAGGGGGTGGAACTTGGGATCAGACACCCGGTGCGTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: WLSLACPFLMMIIFE*RGWNLGSDTRCVLE
Trigger: CTCCAGCACGCACCGGGTGTCTGATCCCAAGTTCCACCCCCTCCATTCAAAGATAATCATCATCAAGAAAGGGCATGCTAAAGACAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000428530.5
ENST00000448817.1
ENST00000460477.1
ENST00000465642.1
ENST00000613132.5
CDS CCA 90 bp AATTCCGTTGGCAGGCGAAGTCTTGGGACATTTCTGACTTACATTTaGGTCTCAGGGAGCCAAGGCACTGCGGGGTTTAATTTACACCCG +
Preference number: 5 (lower is better)
Translates to: NSVGRRSLGTFLTYI*VSGSQGTAGFNLHP
Trigger: CGGGTGTAAATTAAACCCCGCAGTGCCTTGGCTCCCTGAGACCCAAATGTAAGTCAGAAATGTCCCAAGACTTCGCCTGCCAACGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448817.1
CDS-3UTR CAA 90 bp GGGTTTAAAGGTTTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTAGCTCCACATTAACCTaGCGGCAGGCGTCTACTTGC +
Preference number: 5 (lower is better)
Translates to: GFKGFPILDKACAHCTGSSSTLT*RQASTC
Trigger: GCAAGTAGACGCCTGCCGCAAGGTTAATGTGGAGCT...ACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAAACCTTTAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp AAGTCAGTGGTCGGCCGCTTCGACCAACATGTGGTGAGCATTCCACGGGCGCATGTCCTTGGCAGTCTTTaGTGCAAAATAAGGCATATT +
Preference number: 5 (lower is better)
Translates to: KSVVGRFDQHVVSIPRAHVLGSL*CKIRHI
Trigger: AATATGCCTTATTTTGCACAAAAGACTGCCAAGGAC...ATGCGCCCGTGGAATGCTCACCACATGTTGGTCGAAGCGGCCGACCACTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp GGGAGTGGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACCAGTCATGGCCACAGTaGTATCATATAGCATCTCTA +
Preference number: 5 (lower is better)
Translates to: GSGGEACSLHRQHSRLSHQSWPQ*YHIASL
Trigger: TAGAGATGCTATATGATACAACTGTGGCCATGACTG...GTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCCACTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp AGCATGAGAATGACTCTAAGTTCAACAAACATGGGTGAATCTCTATGTGCTCCCCAGACCTTCTTGGGTTaGGCCTCCGGGAGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: SMRMTLSSTNMGESLCAPQTFLG*ASGRAA
Trigger: GGCTGCTCTCCCGGAGGCCAAACCCAAGAAGGTCTG...GGGAGCACATAGAGATTCACCCATGTTTGTTGAACTTAGAGTCATTCTCATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp AGCATGAGAATGACTCTAAGTTCAACAAACATGGGTGAATCTCTATGTGCTCCCCCCCGCTTCCTGCCTTaGGAAGGGCGACACTGCTTT +
Preference number: 5 (lower is better)
Translates to: SMRMTLSSTNMGESLCAPPRFLP*EGRHCF
Trigger: AAAGCAGTGTCGCCCTTCCAAAGGCAGGAAGCGGGG...GGGAGCACATAGAGATTCACCCATGTTTGTTGAACTTAGAGTCATTCTCATGCT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp GTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTCCCTGTCTCTCTAAACATTCTTCTTGGTaGAGGGATCCACGCCCTTGT +
Preference number: 5 (lower is better)
Translates to: VPLLVMPLNVEADSPCLSKHSSW*RDPRPC
Trigger: ACAAGGGCGTGGATCCCTCAACCAAGAAGAATGTTT...AGAGAGACAGGGAGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp GGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGACCTTGCTGTGAGGTATCCTaGCGGCAGGCGTCTACTTGC +
Preference number: 5 (lower is better)
Translates to: GSCGLKRFLCEDKWTSRPCCEVS*RQASTC
Trigger: GCAAGTAGACGCCTGCCGCAAGGATACCTCACAGCA...AGGTCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS TCA 90 bp GGAATGTGTACACCCCTGGGACTCAGCACATTGAGGAACTTCAGGTaGTTCAGTGTGTCTTCCATTTCTCTACGGCAGGGACCATATTCT +
Preference number: 5 (lower is better)
Translates to: GMCTPLGLSTLRNFR*FSVSSISLRQGPYS
Trigger: AGAATATGGTCCCTGCCGTAGAGAAATGGAAGACACACTGAATCACCTGAAGTTCCTCAATGTGCTGAGTCCCAGGGGTGTACACATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000428530.5
ENST00000448817.1
ENST00000613132.5
CDS-3UTR CAA 90 bp GGGAGTGGGGGTGAAGCGTGTTCTCTACATAGGCAACACAGCCGCCTAAGTCACGAGTCTCTGAATATTTaGATAGGAAGCGACAAGAAA +
Preference number: 5 (lower is better)
Translates to: GSGGEACSLHRQHSRLSHESLNI*IGSDKK
Trigger: TTTCTTGTCGCTTCCTATCAAAATATTCAGAGACTC...GTGACTTAGGCGGCTGTGTTGCCTATGTAGAGAACACGCTTCACCCCCACTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp GCAGGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGATATTCTGTCTCCCGCTaGGACTCGGAGGAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: AGSCGLKRFLCEDKWTSRYSVSR*DSEEKF
Trigger: GAACTTCTCCTCCGAGTCCAAGCGGGAGACAGAATA...TCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR CAA 90 bp GGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATAAATGGACCTCCAGACCTCCCTTCTTGTCACAGTaGGGAATGTGTACACCCCTG +
Preference number: 5 (lower is better)
Translates to: GSCGLKRFLCEDKWTSRPPFLSQ*GMCTPL
Trigger: CAGGGGTGTACACATTCCCAACTGTGACAAGAAGGG...AGGTCTGGAGGTCCATTTATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS CCA 90 bp ATGGTACTGAAAGTGGCACGCGGAGTTCAAACCTACACTCTGTTGTaGCCGCTGGGTAACCTTAAGAAGTTACTTCTTTTTCAGCTTCAG +
Preference number: 5 (lower is better)
Translates to: MVLKVARGVQTYTLL*PLGNLKKLLLFQLQ
Trigger: CTGAAGCTGAAAAAGAAGTAACTTCTTAAGGTTACCCAGCGGCCACAACAGAGTGTAGGTTTGAACTCCGCGTGCCACTTTCAGTACCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465642.1
CDS-3UTR CAA 90 bp TCTGGGTGCTGTGCTCGAGTCTCTGAATATTTTGATAGGAAGCGACAAGAAAATTATTCTGTCTCCCGCTaGGACTCGGAGGAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: SGCCARVSEYFDRKRQENYSVSR*DSEEKF
Trigger: GAACTTCTCCTCCGAGTCCAAGCGGGAGACAGAATA...ATTTTCTTGTCGCTTCCTATCAAAATATTCAGAGACTCGAGCACAGCACCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp AAACATGTATCTTTAGCAGGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATCCCCGCTTCCTGCCTTaGGAAGGGCGACACTGCTTT +
Preference number: 5 (lower is better)
Translates to: KHVSLAGSCGLKRFLCEDPRFLP*EGRHCF
Trigger: AAAGCAGTGTCGCCCTTCCAAAGGCAGGAAGCGGGG...ATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACCTGCTAAAGATACATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS-3UTR CAA 90 bp ATCCGAAGAATTGTGCCATTACTTGTGATGCCTCTGAATGTGGAGGCTGACTCTGGTAGGCAGAATGTCTaGAGACCCCTCTGTTTTCAA +
Preference number: 5 (lower is better)
Translates to: IRRIVPLLVMPLNVEADSGRQNV*RPLCFQ
Trigger: TTGAAAACAGAGGGGTCTCAAGACATTCTGCCTACC...AGAGTCAGCCTCCACATTCAGAGGCATCACAAGTAATGGCACAATTCTTCGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp CGTGAGCTCCTTTCCTCAGTCATGGCCACAGTTGTATCATATAGCATCTCTAACGGTAGGCAGAATGTCTaGAGACCCCTCTGTTTTCAA +
Preference number: 5 (lower is better)
Translates to: RELLSSVMATVVSYSISNGRQNV*RPLCFQ
Trigger: TTGAAAACAGAGGGGTCTCAAGACATTCTGCCTACC...GTTAGAGATGCTATATGATACAACTGTGGCCATGACTGAGGAAAGGAGCTCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp GCGACAAGAAAATTCAAACTGCTCTTTGCTGACTACTGGAAAGTGAAAAGATGCCCCTTCTTGTCACAGTaGGGAATGTGTACACCCCTG +
Preference number: 5 (lower is better)
Translates to: ATRKFKLLFADYWKVKRCPFLSQ*GMCTPL
Trigger: CAGGGGTGTACACATTCCCAACTGTGACAAGAAGGG...GCATCTTTTCACTTTCCAGTAGTCAGCAAAGAGCAGTTTGAATTTTCTTGTCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp TCTGGGTGCTGTGCTCGAGTCTCTGAATATTTTGATAGGAAGCGACAAGAAAATAAACATTCTTCTTGGTaGAGGGATCCACGCCCTTGT +
Preference number: 5 (lower is better)
Translates to: SGCCARVSEYFDRKRQENKHSSW*RDPRPC
Trigger: ACAAGGGCGTGGATCCCTCAACCAAGAAGAATGTTT...ATTTTCTTGTCGCTTCCTATCAAAATATTCAGAGACTCGAGCACAGCACCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp GGGTTTAAAGGTTTTCCTATTCTCGATAAAGCCTGTGCGCACTGTACGGGGAGTCAAAATAAGGCATATTaGAGCTCCACATTAACCTTG +
Preference number: 5 (lower is better)
Translates to: GFKGFPILDKACAHCTGSQNKAY*SSTLTL
Trigger: CAAGGTTAATGTGGAGCTCAAATATGCCTTATTTTG...ACTCCCCGTACAGTGCGCACAGGCTTTATCGAGAATAGGAAAACCTTTAAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp CGTGAGCTCCTTTCCTCAGTCATGGCCACAGTTGTATCATATAGCATCTCTAACCAAAATAAGGCATATTaGAGCTCCACATTAACCTTG +
Preference number: 5 (lower is better)
Translates to: RELLSSVMATVVSYSISNQNKAY*SSTLTL
Trigger: CAAGGTTAATGTGGAGCTCAAATATGCCTTATTTTG...GTTAGAGATGCTATATGATACAACTGTGGCCATGACTGAGGAAAGGAGCTCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp AGCTTTGCCTTTAAAGAGCTTATCCTCAGAAATAAGCTTCGTCTTGAGTTGTTGCTGCTGGTCATGTCCTaGGCAGTCTTTTGTGCAAAA +
Preference number: 5 (lower is better)
Translates to: SFAFKELILRNKLRLELLLLVMS*AVFCAK
Trigger: TTTTGCACAAAAGACTGCCAAGGACATGACCAGCAG...CAACAACTCAAGACGAAGCTTATTTCTGAGGATAAGCTCTTTAAAGGCAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp AGCATGAGAATGACTCTAAGTTCAACAAACATGGGTGAATCTCTATGTGCTCCCCAGTCATGGCCACAGTaGTATCATATAGCATCTCTA +
Preference number: 5 (lower is better)
Translates to: SMRMTLSSTNMGESLCAPQSWPQ*YHIASL
Trigger: TAGAGATGCTATATGATACAACTGTGGCCATGACTG...GGGAGCACATAGAGATTCACCCATGTTTGTTGAACTTAGAGTCATTCTCATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp TCTGGGTGCTGTGCTCGAGTCTCTGAATATTTTGATAGGAAGCGACAAGAAAATGAGTCTCTGAATATTTaGATAGGAAGCGACAAGAAA +
Preference number: 5 (lower is better)
Translates to: SGCCARVSEYFDRKRQENESLNI*IGSDKK
Trigger: TTTCTTGTCGCTTCCTATCAAAATATTCAGAGACTC...ATTTTCTTGTCGCTTCCTATCAAAATATTCAGAGACTCGAGCACAGCACCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000381086.9
CDS-3UTR CAA 90 bp AAACATGTATCTTTAGCAGGTTCTTGCGGATTAAAACGGTTTCTCTGTGAAGATATCTTTAGCAGGTTCTaGCGGATTAAAACGGTTTCT +
Preference number: 5 (lower is better)
Translates to: KHVSLAGSCGLKRFLCEDIFSRF*RIKTVS
Trigger: AGAAACCGTTTTAATCCGCAAGAACCTGCTAAAGAT...ATCTTCACAGAGAAACCGTTTTAATCCGCAAGAACCTGCTAAAGATACATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS CCA 72 bp ACCAGCTCCGCGCACACGGCGGGCGGAGGCGCGCACTaGGCCAGTGCACGCGCGTCGCACGGCTCGCAGCGC +
Preference number: 6 (lower is better)
Translates to: TSSAHTAGGGAH*ASARASHGSQR
Trigger: GCGCTGCGAGCCGTGCGACGCGCGTGCACTGGCCCAGTGCGCGCCTCCGCCCGCCGTGTGCGCGGAGCTGGT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000613132.5
CDS GCA 72 bp GGCCCAGAGCGTGGGTCGCGCCCGCTGCATGACGCCTaGAACCGGGGCACGCTGCTTGGCAGGCTGGGCGCG +
Preference number: 6 (lower is better)
Translates to: GPERGSRPLHDA*NRGTLLGRLGA
Trigger: CGCGCCCAGCCTGCCAAGCAGCGTGCCCCGGTTGCAGGCGTCATGCAGCGGGCGCGACCCACGCTCTGGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000613132.5
CDS GCA 72 bp CAGCGCCTGCAGCGGTCGCGCCCGCTGCATGACGCCTaGAACCGGGGCACGCTGCTTGGCAGGCTGGGCGCG +
Preference number: 6 (lower is better)
Translates to: QRLQRSRPLHDA*NRGTLLGRLGA
Trigger: CGCGCCCAGCCTGCCAAGCAGCGTGCCCCGGTTGCAGGCGTCATGCAGCGGGCGCGACCGCTGCAGGCGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381086.9
CDS CCA 72 bp TCCTGGCGCGGGCGGCTCACCTGGAGCTGGCGGCGCTaGCAGCAGGTAGGCGCGCAGGCGGCTGACGGCACT +
Preference number: 6 (lower is better)
Translates to: SWRGRLTWSWRR*QQVGAQAADGT
Trigger: AGTGCCGTCAGCCGCCTGCGCGCCTACCTGCTGCCAGCGCCGCCAGCTCCAGGTGAGCCGCCCGCGCCAGGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381083.9
CDS TCA 72 bp GCGCAGCGGCCCAGAGCGTGGGTCGCGCCCGCTGCATaGCGCCTGCAACCGGGGCACGCTGCTTGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: AQRPRAWVAPAA*RLQPGHAAWQA
Trigger: AGCCTGCCAAGCAGCGTGCCCCGGTTGCAGGCGTCATGCAGCGGGCGCGACCCACGCTCTGGGCCGCTGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000613132.5
CDS GCA 72 bp CGCGCCCGCTGCATGACGCCTGCAACCGGGGCACGCTaGTTGGCAGGCTGGGCGCGCAGGGATGGGGCGACA +
Preference number: 6 (lower is better)
Translates to: RARCMTPATGAR*LAGWARRDGAT
Trigger: TGTCGCCCCATCCCTGCGCGCCCAGCCTGCCAAGCAGCGTGCCCCGGTTGCAGGCGTCATGCAGCGGGCGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.5
CDS CAA 90 bp GTGGGTCGCGCCCGCTGCATGACGCCTGCAACCGGGGCACGCTGCTaGGCAGGCTGGGCGCGCAGGGATGGGGCGACAGTACACGGCGCG +
Preference number: 6 (lower is better)
Translates to: VGRARCMTPATGARC*AGWARRDGATVHGA
Trigger: CGCGCCGTGTACTGTCGCCCCATCCCTGCGCGCCCAGCCTGCCAAGCAGCGTGCCCCGGTTGCAGGCGTCATGCAGCGGGCGCGACCCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000613132.5
CDS CAA 90 bp AGCGGTCGCGCCCGCTGCATGACGCCTGCAACCGGGGCACGCTGCTaGGCAGGCTGGGCGCGCAGGGATGGGGCGACAGTACACGGCGCG +
Preference number: 6 (lower is better)
Translates to: SGRARCMTPATGARC*AGWARRDGATVHGA
Trigger: CGCGCCGTGTACTGTCGCCCCATCCCTGCGCGCCCAGCCTGCCAAGCAGCGTGCCCCGGTTGCAGGCGTCATGCAGCGGGCGCGACCGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381086.9
CDS GCA 72 bp GTCAGCGCAGCGGCCCAGAGCGTGGGTCGCGCCCGCTaGATGACGCCTGCAACCGGGGCACGCTGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: VSAAAQSVGRAR*MTPATGARCLA
Trigger: TGCCAAGCAGCGTGCCCCGGTTGCAGGCGTCATGCAGCGGGCGCGACCCACGCTCTGGGCCGCTGCGCTGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381083.9
ENST00000613132.5
CDS CCA 72 bp ATGACGCCTGCAACCGGGGCACGCTGCTTGGCAGGCTaGGCGCGCAGGGATGGGGCGACAGTACACGGCGCG +
Preference number: 6 (lower is better)
Translates to: MTPATGARCLAG*ARRDGATVHGA
Trigger: CGCGCCGTGTACTGTCGCCCCATCCCTGCGCGCCCAGCCTGCCAAGCAGCGTGCCCCGGTTGCAGGCGTCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.5
CDS CCA 72 bp ACTAGCATTTCCTGGCGCGGGCGGCTCACCTGGAGCTaGCGGCGCTGGCAGCAGGTAGGCGCGCAGGCGGCT +
Preference number: 6 (lower is better)
Translates to: TSISWRGRLTWS*RRWQQVGAQAA
Trigger: AGCCGCCTGCGCGCCTACCTGCTGCCAGCGCCGCCAGCTCCAGGTGAGCCGCCCGCGCCAGGAAATGCTAGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381083.9
CDS CCA 72 bp CGGGGCACGCTGCTTGGCAGGCTGGGCGCGCAGGGATaGGGCGACAGTACACGGCGCGAAGCTGTGGAATCC +
Preference number: 6 (lower is better)
Translates to: RGTLLGRLGAQG*GDSTRREAVES
Trigger: GGATTCCACAGCTTCGCGCCGTGTACTGTCGCCCCATCCCTGCGCGCCCAGCCTGCCAAGCAGCGTGCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.5
CDS GCA 72 bp GGAGGGGGTGGAACTTGGGATCAGACACCCGGTGCGTaGTGGAGACGGACGGGCTCTCCACACTGCCGGCGC +
Preference number: 6 (lower is better)
Translates to: GGGGTWDQTPGA*WRRTGSPHCRR
Trigger: GCGCCGGCAGTGTGGAGAGCCCGTCCGTCTCCAGCACGCACCGGGTGTCTGATCCCAAGTTCCACCCCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000448817.1
ENST00000460477.1
ENST00000465642.1
ENST00000613132.5
CDS CCA 72 bp GGGGGTGGAACTTGGGATCAGACACCCGGTGCGTGCTaGAGACGGACGGGCTCTCCACACTGCCGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: GGGTWDQTPGAC*RRTGSPHCRRC
Trigger: GCAGCGCCGGCAGTGTGGAGAGCCCGTCCGTCTCCAGCACGCACCGGGTGTCTGATCCCAAGTTCCACCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000448817.1
ENST00000460477.1
ENST00000465642.1
ENST00000613132.5
CDS CCA 72 bp CGCAGGGATGGGGCGACAGTACACGGCGCGAAGCTGTaGAATCCAGGCAGGAAGCGGCTGATCCTCAGCGCC +
Preference number: 6 (lower is better)
Translates to: RRDGATVHGAKL*NPGRKRLILSA
Trigger: GGCGCTGAGGATCAGCCGCTTCCTGCCTGGATTCCACAGCTTCGCGCCGTGTACTGTCGCCCCATCCCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000613132.5
CDS CAA 72 bp CTGGAGCCCCAGGCTGCCCCTCCTGAGTACTCACCCTaGCGGCAGGCGTCTACTTGCTCTGCATGCTGTAGC +
Preference number: 6 (lower is better)
Translates to: LEPQAAPPEYSP*RQASTCSACCS
Trigger: GCTACAGCATGCAGAGCAAGTAGACGCCTGCCGCAAGGGTGAGTACTCAGGAGGGGCAGCCTGGGGCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS CAA 90 bp AGTGAGGCCCTGGAGCCCCAGGCTGCCCCTCCTGAGTACTCACCCTaGCGGCAGGCGTCTACTTGCTCTGCATGCTGTAGCAGTGCACGT +
Preference number: 6 (lower is better)
Translates to: SEALEPQAAPPEYSP*RQASTCSACCSSAR
Trigger: ACGTGCACTGCTACAGCATGCAGAGCAAGTAGACGCCTGCCGCAAGGGTGAGTACTCAGGAGGGGCAGCCTGGGGCTCCAGGGCCTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS GCA 72 bp TGGAGCCCCAGGCTGCCCCTCCTGAGTACTCACCCTTaGGGCAGGCGTCTACTTGCTCTGCATGCTGTAGCA +
Preference number: 6 (lower is better)
Translates to: WSPRLPLLSTHP*GRRLLALHAVA
Trigger: TGCTACAGCATGCAGAGCAAGTAGACGCCTGCCGCAAGGGTGAGTACTCAGGAGGGGCAGCCTGGGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS GCA 72 bp CCTCCTGAGTACTCACCCTTGCGGCAGGCGTCTACTTaGTCTGCATGCTGTAGCAGTGCACGTCCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: PPEYSPLRQAST*SACCSSARPPS
Trigger: GGAAGGAGGACGTGCACTGCTACAGCATGCAGAGCAAGTAGACGCCTGCCGCAAGGGTGAGTACTCAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417621.5
CDS GCA 72 bp AGCCATGCGTGCCTAGGCCCGCTGAGTGTGCGCCTGTaGATGCGTGTGGGTGTAACTTCCTGCTCCAAGAAA +
Preference number: 6 (lower is better)
Translates to: SHACLGPLSVRL*MRVGVTSCSKK
Trigger: TTTCTTGGAGCAGGAAGTTACACCCACACGCATGCACAGGCGCACACTCAGCGGGCCTAGGCACGCATGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460209.1
CDS CCA 72 bp GCAGTGCACGTCCTCCTTCCCCTTGGTGGTGTAGCCTaGGAGAGGCTGCCCATACTTATCCACACACCAGCA +
Preference number: 6 (lower is better)
Translates to: AVHVLLPLGGVA*ERLPILIHTPA
Trigger: TGCTGGTGTGTGGATAAGTATGGGCAGCCTCTCCCAGGCTACACCACCAAGGGGAAGGAGGACGTGCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000428530.5
ENST00000460209.1
ENST00000613132.5
CDS CCA 72 bp GAGGGGCTAGGGGTTGCCCACCCATCAGCCAGGCGCTaGGGTTTGTTGAGTAAGAATTGCCCTCAAGAGGCT +
Preference number: 6 (lower is better)
Translates to: EGLGVAHPSARR*GLLSKNCPQEA
Trigger: AGCCTCTTGAGGGCAATTCTTACTCAACAAACCCCAGCGCCTGGCTGATGGGTGGGCAACCCCTAGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460477.1
CDS GCA 72 bp AGGTGCTGTGAGGTATCCTTGCGGCAGGCGTCTACTTaGTCTGCATGCTGTAGCAGTGCACGTCCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: RCCEVSLRQAST*SACCSSARPPS
Trigger: GGAAGGAGGACGTGCACTGCTACAGCATGCAGAGCAAGTAGACGCCTGCCGCAAGGATACCTCACAGCACCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428530.5
CDS GCA 72 bp CTGGTGTCAGGTCGGTGGCCAGGGCGCATGATGGTTTaGCAGCGTGACTCTGCTATGCTGAGAAAGCACAAC +
Preference number: 6 (lower is better)
Translates to: LVSGRWPGRMMV*QRDSAMLRKHN
Trigger: GTTGTGCTTTCTCAGCATAGCAGAGTCACGCTGGCAAACCATCATGCGCCCTGGCCACCGACCTGACACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460209.1
CDS GCA 72 bp CCATCAGCCAGGCGCTGGGGTTTGTTGAGTAAGAATTaGCCTCAAGAGGCTCTGAGTACCCAGGCTTGGCAG +
Preference number: 6 (lower is better)
Translates to: PSARRWGLLSKN*PQEALSTQAWQ
Trigger: CTGCCAAGCCTGGGTACTCAGAGCCTCTTGAGGGCAATTCTTACTCAACAAACCCCAGCGCCTGGCTGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460477.1
CDS CCA 72 bp TCTGCATGCTGTAGCAGTGCACGTCCTCCTTCCCCTTaGTGGTGTAGCCTGGGAGAGGCTGCCCATACTTAT +
Preference number: 6 (lower is better)
Translates to: SACCSSARPPSP*WCSLGEAAHTY
Trigger: ATAAGTATGGGCAGCCTCTCCCAGGCTACACCACCAAGGGGAAGGAGGACGTGCACTGCTACAGCATGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000428530.5
ENST00000460209.1
ENST00000613132.5
CDS CAA 90 bp TGCCCTTTCTTGATGATGATTATCTTTGAATGGAGGGGGTGGAACTaGGGATCAGACACCCGGTGCGTGCTGGAGACGGACGGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: CPFLMMIIFEWRGWN*GSDTRCVLETDGLS
Trigger: GGAGAGCCCGTCCGTCTCCAGCACGCACCGGGTGTCTGATCCCAAGTTCCACCCCCTCCATTCAAAGATAATCATCATCAAGAAAGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000428530.5
ENST00000448817.1
ENST00000460477.1
ENST00000465642.1
ENST00000613132.5
CDS GCA 72 bp CCCGCTTGGACTCGGAGGAGAAGTTCTGGGTATCTGTaGTCTGAGACTCGTAGTCAACTTTGTAGCGCTGGC +
Preference number: 6 (lower is better)
Translates to: PAWTRRRSSGYL*SETRSQLCSAG
Trigger: GCCAGCGCTACAAAGTTGACTACGAGTCTCAGAGCACAGATACCCAGAACTTCTCCTCCGAGTCCAAGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000428530.5
ENST00000448817.1
ENST00000460477.1
ENST00000465642.1
ENST00000613132.5
CDS GCA 72 bp TTGAGCTCCACATTAACCTTGCGGCAGGCGTCTACTTaGTCTGCATGCTGTAGCAGTGCACGTCCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: LSSTLTLRQAST*SACCSSARPPS
Trigger: GGAAGGAGGACGTGCACTGCTACAGCATGCAGAGCAAGTAGACGCCTGCCGCAAGGTTAATGTGGAGCTCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000460209.1
ENST00000613132.5
CDS GCA 72 bp CATACTTATCCACACACCAGCAGAAGCCCCGCTTCCTaGCTTTGGAAGGGCGACACTGTGGGAGAGAAACAG +
Preference number: 6 (lower is better)
Translates to: HTYPHTSRSPAS*LWKGDTVGEKQ
Trigger: CTGTTTCTCTCCCACAGTGTCGCCCTTCCAAAGGCAGGAAGCGGGGCTTCTGCTGGTGTGTGGATAAGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460209.1
CDS CCA 72 bp GAAGCCCCGCTTCCTGCCTTTGGAAGGGCGACACTGTaGGAGAGAAACAGAAGACAGAGAAGTGAATGCTCC +
Preference number: 6 (lower is better)
Translates to: EAPLPAFGRATL*ERNRRQRSECS
Trigger: GGAGCATTCACTTCTCTGTCTTCTGTTTCTCTCCCACAGTGTCGCCCTTCCAAAGGCAGGAAGCGGGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460209.1
CDS CAA 72 bp TTATCCACACACCAGCAGAAGCCCCGCTTCCTGCCTTaGGAAGGGCGACACTGTGGGAGAGAAACAGAAGAC +
Preference number: 6 (lower is better)
Translates to: LSTHQQKPRFLP*EGRHCGRETED
Trigger: GTCTTCTGTTTCTCTCCCACAGTGTCGCCCTTCCAAAGGCAGGAAGCGGGGCTTCTGCTGGTGTGTGGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460209.1
CDS GCA 72 bp TCTGCCAAATGTGGGACTGAGAACATCCCCGCTGCCTaGGAATGTCACAGCTATGACTTTGGAGCCCACATC +
Preference number: 6 (lower is better)
Translates to: SAKCGTENIPAA*ECHSYDFGAHI
Trigger: GATGTGGGCTCCAAAGTCATAGCTGTGACATTCGCAGGCAGCGGGGATGTTCTCAGTCCCACATTTGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460209.1
CDS CAA 72 bp CCTCAAGAGGCTCTGAGTACCCAGGCTTGGCAGGTCTaGCCCTCCTCCTTTAACAAGAGGAAAAGCTCTCAC +
Preference number: 6 (lower is better)
Translates to: PQEALSTQAWQV*PSSFNKRKSSH
Trigger: GTGAGAGCTTTTCCTCTTGTTAAAGGAGGAGGGCAAGACCTGCCAAGCCTGGGTACTCAGAGCCTCTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460477.1
CDS CCA 72 bp TTTCTCTACGGCAGGGACCATATTCTGTCTCCCGCTTaGACTCGGAGGAGAAGTTCTGGGTATCTGTGCTCT +
Preference number: 6 (lower is better)
Translates to: FLYGRDHILSPA*TRRRSSGYLCS
Trigger: AGAGCACAGATACCCAGAACTTCTCCTCCGAGTCCAAGCGGGAGACAGAATATGGTCCCTGCCGTAGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000428530.5
ENST00000448817.1
ENST00000465642.1
ENST00000613132.5
CDS CAA 72 bp ATTTCTCTACGGCAGGGACCATATTCTGTCTCCCGCTaGGACTCGGAGGAGAAGTTCTGGGTATCTGTGCTC +
Preference number: 6 (lower is better)
Translates to: ISLRQGPYSVSR*DSEEKFWVSVL
Trigger: GAGCACAGATACCCAGAACTTCTCCTCCGAGTCCAAGCGGGAGACAGAATATGGTCCCTGCCGTAGAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000428530.5
ENST00000448817.1
ENST00000465642.1
ENST00000613132.5
CDS TCA 72 bp ACACCCCTGGGACTCAGCACATTGAGGAACTTCAGGTaGTTCAGTGTGTCTTCCATTTCTCTACGGCAGGGA +
Preference number: 6 (lower is better)
Translates to: TPLGLSTLRNFR*FSVSSISLRQG
Trigger: TCCCTGCCGTAGAGAAATGGAAGACACACTGAATCACCTGAAGTTCCTCAATGTGCTGAGTCCCAGGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000428530.5
ENST00000448817.1
ENST00000613132.5
CDS CCA 72 bp CCTTTCTTGATGATGATTATCTTTGAATGGAGGGGGTaGAACTTGGGATCAGACACCCGGTGCGTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: PFLMMIIFEWRG*NLGSDTRCVLE
Trigger: CTCCAGCACGCACCGGGTGTCTGATCCCAAGTTCCACCCCCTCCATTCAAAGATAATCATCATCAAGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000428530.5
ENST00000448817.1
ENST00000460477.1
ENST00000465642.1
ENST00000613132.5
CDS CCA 72 bp CAAGAGGAAAAGCTCTCACATATTCTGTCTCCCGCTTaGACTCGGAGGAGAAGTTCTGGGTATCTGTGCTCT +
Preference number: 6 (lower is better)
Translates to: QEEKLSHILSPA*TRRRSSGYLCS
Trigger: AGAGCACAGATACCCAGAACTTCTCCTCCGAGTCCAAGCGGGAGACAGAATATGTGAGAGCTTTTCCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460477.1
CDS CAA 72 bp ACAAGAGGAAAAGCTCTCACATATTCTGTCTCCCGCTaGGACTCGGAGGAGAAGTTCTGGGTATCTGTGCTC +
Preference number: 6 (lower is better)
Translates to: TRGKALTYSVSR*DSEEKFWVSVL
Trigger: GAGCACAGATACCCAGAACTTCTCCTCCGAGTCCAAGCGGGAGACAGAATATGTGAGAGCTTTTCCTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460477.1
CDS CAA 90 bp AAGAATTGCCCTCAAGAGGCTCTGAGTACCCAGGCTTGGCAGGTCTaGCCCTCCTCCTTTAACAAGAGGAAAAGCTCTCACATATTCTGT +
Preference number: 6 (lower is better)
Translates to: KNCPQEALSTQAWQV*PSSFNKRKSSHIFC
Trigger: ACAGAATATGTGAGAGCTTTTCCTCTTGTTAAAGGAGGAGGGCAAGACCTGCCAAGCCTGGGTACTCAGAGCCTCTTGAGGGCAATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460477.1
CDS TCA 72 bp GAGTATAAGGTGGACACCAGCCCTTGTAGAACCTCTTaGCTGACTTCTCTGCCAAATGTGGGACTGAGAACA +
Preference number: 6 (lower is better)
Translates to: EYKVDTSPCRTS*LTSLPNVGLRT
Trigger: TGTTCTCAGTCCCACATTTGGCAGAGAAGTCAGTCAAGAGGTTCTACAAGGGCTGGTGTCCACCTTATACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460209.1
CDS GCA 72 bp CATACTTATCCACACACCAGCAGAAGCCCCGCTTCCTaGCTTTGGAAGGGCGACACTGCTTTTTCTTATAAA +
Preference number: 6 (lower is better)
Translates to: HTYPHTSRSPAS*LWKGDTAFSYK
Trigger: TTTATAAGAAAAAGCAGTGTCGCCCTTCCAAAGGCAGGAAGCGGGGCTTCTGCTGGTGTGTGGATAAGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000428530.5
ENST00000613132.5
CDS CAA 72 bp CTGAAAGTGGCACGCGGAGTTCAAACCTACACTCTGTaGTGGCCGCTGGGTAACCTTAAGAAGTTACTTCTT +
Preference number: 6 (lower is better)
Translates to: LKVARGVQTYTL*WPLGNLKKLLL
Trigger: AAGAAGTAACTTCTTAAGGTTACCCAGCGGCCACAACAGAGTGTAGGTTTGAACTCCGCGTGCCACTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465642.1
CDS CAA 90 bp GGTATGGTACTGAAAGTGGCACGCGGAGTTCAAACCTACACTCTGTaGTGGCCGCTGGGTAACCTTAAGAAGTTACTTCTTTTTCAGCTT +
Preference number: 6 (lower is better)
Translates to: GMVLKVARGVQTYTL*WPLGNLKKLLLFQL
Trigger: AAGCTGAAAAAGAAGTAACTTCTTAAGGTTACCCAGCGGCCACAACAGAGTGTAGGTTTGAACTCCGCGTGCCACTTTCAGTACCATACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465642.1
CDS TCA 72 bp AGTTGGGAATGTGTACACCCCTGGGACTCAGCACATTaGGGAACTTCAGGTGATTCAGTGTGTCTTCCATTT +
Preference number: 6 (lower is better)
Translates to: SWECVHPWDSAH*GTSGDSVCLPF
Trigger: AAATGGAAGACACACTGAATCACCTGAAGTTCCTCAATGTGCTGAGTCCCAGGGGTGTACACATTCCCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381083.9
ENST00000381086.9
ENST00000417621.5
ENST00000428530.5
ENST00000448817.1
ENST00000613132.5
CDS CCA 72 bp CACGCGGAGTTCAAACCTACACTCTGTTGTGGCCGCTaGGTAACCTTAAGAAGTTACTTCTTTTTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: HAEFKPTLCCGR*VTLRSYFFFSF
Trigger: GAAGCTGAAAAAGAAGTAACTTCTTAAGGTTACCCAGCGGCCACAACAGAGTGTAGGTTTGAACTCCGCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465642.1
CDS GCA 72 bp ATTTTAAAAGAGAGGTACTATTTCCTACAACGTGCCTaGCCACCTTCCTTGGTCCAAATCCGCCTATATCCC +
Preference number: 6 (lower is better)
Translates to: ILKERYYFLQRA*PPSLVQIRLYP
Trigger: GGGATATAGGCGGATTTGGACCAAGGAAGGTGGGCAGGCACGTTGTAGGAAATAGTACCTCTCTTTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465642.1
CDS CCA 72 bp AAAGTGGCACGCGGAGTTCAAACCTACACTCTGTTGTaGCCGCTGGGTAACCTTAAGAAGTTACTTCTTTTT +
Preference number: 6 (lower is better)
Translates to: KVARGVQTYTLL*PLGNLKKLLLF
Trigger: AAAAAGAAGTAACTTCTTAAGGTTACCCAGCGGCCACAACAGAGTGTAGGTTTGAACTCCGCGTGCCACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465642.1
CDS GCA 72 bp CAGTATTTTAAAAGAGAGGTACTATTTCCTACAACGTaGCTGCCCACCTTCCTTGGTCCAAATCCGCCTATA +
Preference number: 6 (lower is better)
Translates to: QYFKREVLFPTT*LPTFLGPNPPI
Trigger: TATAGGCGGATTTGGACCAAGGAAGGTGGGCAGGCACGTTGTAGGAAATAGTACCTCTCTTTTAAAATACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465642.1
CDS CAA 72 bp AACCGCAGAAGATATCAAAACCCGAATCCACTTTACTaGTTTTTGGACATACCGGGACTAGACATTGCTTTG +
Preference number: 6 (lower is better)
Translates to: NRRRYQNPNPLY*FLDIPGLDIAL
Trigger: CAAAGCAATGTCTAGTCCCGGTATGTCCAAAAACAAGTAAAGTGGATTCGGGTTTTGATATCTTCTGCGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465642.1
CDS CAA 72 bp AGAAGATATCAAAACCCGAATCCACTTTACTTGTTTTaGGACATACCGGGACTAGACATTGCTTTGCAAACC +
Preference number: 6 (lower is better)
Translates to: RRYQNPNPLYLF*DIPGLDIALQT
Trigger: GGTTTGCAAAGCAATGTCTAGTCCCGGTATGTCCAAAAACAAGTAAAGTGGATTCGGGTTTTGATATCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465642.1