RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGF2R (Homo sapiens)

Ensembl gene IDs: ENSG00000197081

Ensembl transcript IDs: ENST00000356956.6, ENST00000475584.1, ENST00000475834.2, ENST00000569097.2, ENST00000649737.1, ENST00000650503.1, ENST00000676781.1, ENST00000677628.1, ENST00000677704.1, ENST00000678224.1

Found 2710 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCCTCCATGCTGTGACCGCCCGGCCTCCCTCCTCCTCCACGCCATaGCCGCCTGGCCTCCCTCCTCCTCCGCGCTGTACCCGCCCAGCC +
Preference number: 1 (lower is better)
Translates to: LLHAVTARPPSSSTP*PPGLPPPPRCTRPA
Trigger: GGCTGGGCGGGTACAGCGCGGAGGAGGAGGGAGGCCAGGCGGGCATGGCGTGGAGGAGGAGGGAGGCCGGGCGGTCACAGCATGGAGGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 90 bp TGCTGTGACCGCCCGGCCTCCCTCCTCCTCCACGCCATGCCCGCCTaGCCTCCCTCCTCCTCCGCGCTGTACCCGCCCAGCCTCCCTCCA +
Preference number: 1 (lower is better)
Translates to: CCDRPASLLLHAMPA*PPSSSALYPPSLPP
Trigger: TGGAGGGAGGCTGGGCGGGTACAGCGCGGAGGAGGAGGGAGGCCAGGCGGGCATGGCGTGGAGGAGGAGGGAGGCCGGGCGGTCACAGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 90 bp CAGGTGAGCGCCACCAGCAGCAGGCTGAGCACCGCGCCGACTGCCTaGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCG +
Preference number: 1 (lower is better)
Translates to: QVSATSSRLSTAPTA*LRSDSPLCICPSSP
Trigger: CGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGTCGGCGCGGTGCTCAGCCTGCTGCTGGTGGCGCTCACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 90 bp GCCAGAATAAGAACACCAGCAGCGCCTCCCTCCTCCTCCATGCTGTaGCCGCCCGGCCTCCCTCCTCCTCCACGCCATGCCCGCCTGGCC +
Preference number: 1 (lower is better)
Translates to: ARIRTPAAPPSSSML*PPGLPPPPRHARLA
Trigger: GGCCAGGCGGGCATGGCGTGGAGGAGGAGGGAGGCCGGGCGGTCACAGCATGGAGGAGGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 90 bp CACCAGCAGCAGGCTGAGCACCGCGCCGACTGCCTGGCTCCGTTCTaGCAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGATTCTCGCT +
Preference number: 1 (lower is better)
Translates to: HQQQAEHRADCLAPF*QPLVHLPVVPGILA
Trigger: AGCGAGAATCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGTCGGCGCGGTGCTCAGCCTGCTGCTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 90 bp CTGAGCACCGCGCCGACTGCCTGGCTCCGTTCTGACAGCCCCTTGTaGATCTGCCCGTCGTCCCCGGGATTCTCGCTGTCAAAGCCCACC +
Preference number: 1 (lower is better)
Translates to: LSTAPTAWLRSDSPL*ICPSSPGFSLSKPT
Trigger: GGTGGGCTTTGACAGCGAGAATCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGTCGGCGCGGTGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 90 bp CTCTCCACTGAGGTCCGTCCCTTACCCTGCCGAGGTTCACGGGCTTaGAGCCACCCAGCAGACACGCGGCTGCTTCTGGAGGGCACGGCT +
Preference number: 1 (lower is better)
Translates to: LSTEVRPLPCRGSRA*SHPADTRLLLEGTA
Trigger: AGCCGTGCCCTCCAGAAGCAGCCGCGTGTCTGCTGGGTGGCTCCAAGCCCGTGAACCTCGGCAGGGTAAGGGACGGACCTCAGTGGAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 90 bp GGAGGTGCTTGGCTGTCCCGCGGCTCCGTGCTCCCCTGCAGGCACTaGGGAGTCAGATGTGTAAGAGGTCCTCGTCGCTGTCGTCATGGA +
Preference number: 1 (lower is better)
Translates to: GGAWLSRGSVLPCRH*GVRCVRGPRRCRHG
Trigger: TCCATGACGACAGCGACGAGGACCTCTTACACATCTGACTCCGCAGTGCCTGCAGGGGAGCACGGAGCCGCGGGACAGCCAAGCACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 90 bp CCTCCGCGCTGTACCCGCCCAGCCTCCCTCCAGCATGAGGCCAAGTaGAATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGT +
Preference number: 1 (lower is better)
Translates to: PPRCTRPASLQHEAK*NARAEALAHDFSCS
Trigger: ACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCATTGCACTTGGCCTCATGCTGGAGGGAGGCTGGGCGGGTACAGCGCGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 90 bp CGCTGGTGGTGCAGGCCGACCCATTCACGTATTCCAGAAGGAGGCTaGCGCTGTCCTCAACCACCGGGCCGGTCTTTGCCATTCCCAAGT +
Preference number: 1 (lower is better)
Translates to: RWWCRPTHSRIPEGG*RCPQPPGRSLPFPS
Trigger: ACTTGGGAATGGCAAAGACCGGCCCGGTGGTTGAGGACAGCGGCAGCCTCCTTCTGGAATACGTGAATGGGTCGGCCTGCACCACCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 90 bp GGTGGCTGTTCAGCCTGCCCCTGGAGCAGACGAGATGGATCCTCGTaGTATATGTGGTCTGTCTGCCATCGCTGGTGGTGCAGGCCGACC +
Preference number: 1 (lower is better)
Translates to: GGCSACPWSRRDGSS*YMWSVCHRWWCRPT
Trigger: GGTCGGCCTGCACCACCAGCGATGGCAGACAGACCACATATACCACGAGGATCCATCTCGTCTGCTCCAGGGGCAGGCTGAACAGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR TCA 90 bp GCCTTCTCACCCCTGACCAGCCCCACCCTATCGTCCTCACGCTCCTaGAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCT +
Preference number: 1 (lower is better)
Translates to: AFSPLTSPTLSSSRS*RALLCAFLTGWELS
Trigger: AGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTGAGGACGATAGGGTGGGGCTGGTCAGGGGTGAGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 90 bp TCAGGACAATTATGCCATCTCTCCACTGAGGTCCGTCCCTTACCCTaGCGAGGTTCACGGGCTTGGAGCCACCCAGCAGACACGCGGCTG +
Preference number: 1 (lower is better)
Translates to: SGQLCHLSTEVRPLP*RGSRAWSHPADTRL
Trigger: CAGCCGCGTGTCTGCTGGGTGGCTCCAAGCCCGTGAACCTCGGCAGGGTAAGGGACGGACCTCAGTGGAGAGATGGCATAATTGTCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 90 bp CAGACAGACTCCTCCGTCCTTACAGCCTCCTTGTTCTGGCCCGACTaGAAAGGTGCACACCCCAACGCTGTAGGTGCGCGAGTCGCGAGT +
Preference number: 1 (lower is better)
Translates to: QTDSSVLTASLFWPD*KGAHPNAVGARVAS
Trigger: ACTCGCGACTCGCGCACCTACAGCGTTGGGGTGTGCACCTTTGCAGTCGGGCCAGAACAAGGAGGCTGTAAGGACGGAGGAGTCTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 90 bp TATTTGGTTGGAGGTGCTTGGCTGTCCCGCGGCTCCGTGCTCCCCTaGAGGCACTGCGGAGTCAGATGTGTAAGAGGTCCTCGTCGCTGT +
Preference number: 1 (lower is better)
Translates to: YLVGGAWLSRGSVLP*RHCGVRCVRGPRRC
Trigger: ACAGCGACGAGGACCTCTTACACATCTGACTCCGCAGTGCCTGCAGGGGAGCACGGAGCCGCGGGACAGCCAAGCACCTCCAACCAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 90 bp GCTTCTGCGTGTGAACGAGTCCCAGGACCTGGACGTCACCAGTTGTaGTCCTTCTGCAAATGCTGGCCCTTTCAGAGCAGCCCAGGGGCC +
Preference number: 1 (lower is better)
Translates to: ASACERVPGPGRHQL*SFCKCWPFQSSPGA
Trigger: GGCCCCTGGGCTGCTCTGAAAGGGCCAGCATTTGCAGAAGGACCACAACTGGTGACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 90 bp CCGCGGCTTGGGGACTCATCTGCACCACACCCAGATTCCAGCTATTaGCTTCTGACACTAAGCAAGACCCCACTGCGCTGCCCTGGCATC +
Preference number: 1 (lower is better)
Translates to: PRLGDSSAPHPDSSY*LLTLSKTPLRCPGI
Trigger: GATGCCAGGGCAGCGCAGTGGGGTCTTGCTTAGTGTCAGAAGGCAATAGCTGGAATCTGGGTGTGGTGCAGATGAGTCCCCAAGCCGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR GCA 90 bp AGGCCGGATTTGGAGGGACAAGGGGACCCATCCTTGTACACCAGCTaGAGGACCTGGTCCACGTATCTCAGCCTCTTGTTGGCCTTGCCC +
Preference number: 1 (lower is better)
Translates to: RPDLEGQGDPSLYTS*RTWSTYLSLLLALP
Trigger: GGGCAAGGCCAACAAGAGGCTGAGATACGTGGACCAGGTCCTGCAGCTGGTGTACAAGGATGGGTCCCCTTGTCCCTCCAAATCCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 90 bp CTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTaGCCCAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATGGT +
Preference number: 1 (lower is better)
Translates to: LKGIALCVSHWVGAL*PSSPARVNFHLWDG
Trigger: ACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTGGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 90 bp TCAGCCTGCCCCTGGAGCAGACGAGATGGATCCTCGTGGTATATGTaGTCTGTCTGCCATCGCTGGTGGTGCAGGCCGACCCATTCACGT +
Preference number: 1 (lower is better)
Translates to: SACPWSRRDGSSWYM*SVCHRWWCRPTHSR
Trigger: ACGTGAATGGGTCGGCCTGCACCACCAGCGATGGCAGACAGACCACATATACCACGAGGATCCATCTCGTCTGCTCCAGGGGCAGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 90 bp TCCCCATGCAGGGAGCTGAGGGCTTTCACTGACTTGGTGGTAATATaGCCGTTCTCCTGCCCTTCCTTTCCCTGCCGTGGAGGAGGCAGC +
Preference number: 1 (lower is better)
Translates to: SPCRELRAFTDLVVI*PFSCPSFPCRGGGS
Trigger: GCTGCCTCCTCCACGGCAGGGAAAGGAAGGGCAGGAGAACGGCCATATTACCACCAAGTCAGTGAAAGCCCTCAGCTCCCTGCATGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 90 bp CGGGTCCCCCGTCCCAGTGATGGCTTCCCAGTTGTCACTGTACCTTaGCAGGGACGAGAGGTCGAAGGAGTTGCCAGCCCCATCTTTGAA +
Preference number: 1 (lower is better)
Translates to: RVPRPSDGFPVVTVP*QGREVEGVASPIFE
Trigger: TTCAAAGATGGGGCTGGCAACTCCTTCGACCTCTCGTCCCTGTCAAGGTACAGTGACAACTGGGAAGCCATCACTGGGACGGGGGACCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR TCA 90 bp TTTCTCACTGGGTGGGAGCTCTCTGCCCCAGCTCCCCTGCCCGAGTaGACTTTCACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCC +
Preference number: 1 (lower is better)
Translates to: FLTGWELSAPAPLPE*TFTSGMVRTSSSLS
Trigger: GGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTGGGGCAGAGAGCTCCCACCCAGTGAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 90 bp CCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTaGACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTC +
Preference number: 1 (lower is better)
Translates to: PRPYCPQLNVAILPP*TQAHLHHDCPLTPF
Trigger: GAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 90 bp CCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTaGTTTCTCTGGGATGGGGCTGAGTGGCACCAGATGACCTCACCT +
Preference number: 1 (lower is better)
Translates to: PTITSWLSPRPASQG*FLWDGAEWHQMTSP
Trigger: AGGTGAGGTCATCTGGTGCCACTCAGCCCCATCCCAGAGAAAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 90 bp TTCCTCACGGAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTaGCAGGAGAAGAAGAGAGTGCATGTCTGCTTGTCCAGGGAGATG +
Preference number: 1 (lower is better)
Translates to: FLTEHSVACSQASGV*QEKKRVHVCLSREM
Trigger: CATCTCCCTGGACAAGCAGACATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTCCGTGAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 90 bp TCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCAGCTCCCCTaGCCGAGTGAACTTTCACCTCTGGGATGGTCAGAACCTCATCCT +
Preference number: 1 (lower is better)
Translates to: SVRFSLGGSSLPQLP*PSELSPLGWSEPHP
Trigger: AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTGGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 90 bp CGAGATGGATCCTCGTGGTATATGTGGTCTGTCTGCCATCGCTGGTaGTGCAGGCCGACCCATTCACGTATTCCAGAAGGAGGCTGCCGC +
Preference number: 1 (lower is better)
Translates to: RDGSSWYMWSVCHRW*CRPTHSRIPEGGCR
Trigger: GCGGCAGCCTCCTTCTGGAATACGTGAATGGGTCGGCCTGCACCACCAGCGATGGCAGACAGACCACATATACCACGAGGATCCATCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR TCA 90 bp GCATGGGCCTATTGGTTGGCCTGGCCTCAGGCCTGCACACGAAACTaGTCACACTCTTATAGCTCAGGCCGGATTTGGAGGGACAAGGGG +
Preference number: 1 (lower is better)
Translates to: AWAYWLAWPQACTRN*SHSYSSGRIWRDKG
Trigger: CCCCTTGTCCCTCCAAATCCGGCCTGAGCTATAAGAGTGTGATCAGTTTCGTGTGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 90 bp GATGGATCCTCGTGGTATATGTGGTCTGTCTGCCATCGCTGGTGGTaGAGGCCGACCCATTCACGTATTCCAGAAGGAGGCTGCCGCTGT +
Preference number: 1 (lower is better)
Translates to: DGSSWYMWSVCHRWW*RPTHSRIPEGGCRC
Trigger: ACAGCGGCAGCCTCCTTCTGGAATACGTGAATGGGTCGGCCTGCACCACCAGCGATGGCAGACAGACCACATATACCACGAGGATCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 90 bp GGTCGGTCACTACGCATTCCAGGGGCTCCTCCGGGCAGGCATAGCTaGTGTACCACCGGAAGTTGTAGGTGGAGTTATCCTCTTCCTGAT +
Preference number: 1 (lower is better)
Translates to: GRSLRIPGAPPGRHS*CTTGSCRWSYPLPD
Trigger: ATCAGGAAGAGGATAACTCCACCTACAACTTCCGGTGGTACACCAGCTATGCCTGCCCGGAGGAGCCCCTGGAATGCGTAGTGACCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 90 bp TTGGAGGGACAAGGGGACCCATCCTTGTACACCAGCTGCAGGACCTaGTCCACGTATCTCAGCCTCTTGTTGGCCTTGCCCACGCTAATC +
Preference number: 1 (lower is better)
Translates to: LEGQGDPSLYTSCRT*STYLSLLLALPTLI
Trigger: GATTAGCGTGGGCAAGGCCAACAAGAGGCTGAGATACGTGGACCAGGTCCTGCAGCTGGTGTACAAGGATGGGTCCCCTTGTCCCTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 90 bp TATAGAAGCATCATCGAGTGGAAGTCTTATTTGGTTGGAGGTGCTTaGCTGTCCCGCGGCTCCGTGCTCCCCTGCAGGCACTGCGGAGTC +
Preference number: 1 (lower is better)
Translates to: YRSIIEWKSYLVGGA*LSRGSVLPCRHCGV
Trigger: GACTCCGCAGTGCCTGCAGGGGAGCACGGAGCCGCGGGACAGCCAAGCACCTCCAACCAAATAAGACTTCCACTCGATGATGCTTCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 90 bp CTCACTGTCCTGGTCATCCCCATGCAGGGAGCTGAGGGCTTTCACTaGCTTGGTGGTAATATGGCCGTTCTCCTGCCCTTCCTTTCCCTG +
Preference number: 1 (lower is better)
Translates to: LTVLVIPMQGAEGFH*LGGNMAVLLPFLSL
Trigger: CAGGGAAAGGAAGGGCAGGAGAACGGCCATATTACCACCAAGTCAGTGAAAGCCCTCAGCTCCCTGCATGGGGATGACCAGGACAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 90 bp TTCCAGAAGGAGGCTGCCGCTGTCCTCAACCACCGGGCCGGTCTTTaGCATTCCCAAGTTACTGATGGAAACCACTTCAGTGAAGGAGCC +
Preference number: 1 (lower is better)
Translates to: FQKEAAAVLNHRAGL*HSQVTDGNHFSEGA
Trigger: GGCTCCTTCACTGAAGTGGTTTCCATCAGTAACTTGGGAATGGCAAAGACCGGCCCGGTGGTTGAGGACAGCGGCAGCCTCCTTCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR GCA 90 bp CCCTGGAGCAGACGAGATGGATCCTCGTGGTATATGTGGTCTGTCTaGCATCGCTGGTGGTGCAGGCCGACCCATTCACGTATTCCAGAA +
Preference number: 1 (lower is better)
Translates to: PWSRRDGSSWYMWSV*HRWWCRPTHSRIPE
Trigger: TTCTGGAATACGTGAATGGGTCGGCCTGCACCACCAGCGATGGCAGACAGACCACATATACCACGAGGATCCATCTCGTCTGCTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 90 bp CCGCCGGAAGCTGCCCCATACACTGACAGCCTCACCATCTCAAGATaGACAAACTGGTACATCACACCCCTGCTGGCAGGAAGAAACGGT +
Preference number: 1 (lower is better)
Translates to: PPEAAPYTDSLTISR*TNWYITPLLAGRNG
Trigger: ACCGTTTCTTCCTGCCAGCAGGGGTGTGATGTACCAGTTTGTCCATCTTGAGATGGTGAGGCTGTCAGTGTATGGGGCAGCTTCCGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 90 bp AGACGAGATGGATCCTCGTGGTATATGTGGTCTGTCTGCCATCGCTaGTGGTGCAGGCCGACCCATTCACGTATTCCAGAAGGAGGCTGC +
Preference number: 1 (lower is better)
Translates to: RRDGSSWYMWSVCHR*WCRPTHSRIPEGGC
Trigger: GCAGCCTCCTTCTGGAATACGTGAATGGGTCGGCCTGCACCACCAGCGATGGCAGACAGACCACATATACCACGAGGATCCATCTCGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 90 bp GTCGTTGAGGCCCAGGGGCTTCAGGTCATACAAGTTGCCATGCCTTaGGTCTTTCACCTCACAGTTGTCCCCTTCCACTCTGACAACGGG +
Preference number: 1 (lower is better)
Translates to: VVEAQGLQVIQVAMP*VFHLTVVPFHSDNG
Trigger: CCCGTTGTCAGAGTGGAAGGGGACAACTGTGAGGTGAAAGACCCAAGGCATGGCAACTTGTATGACCTGAAGCCCCTGGGCCTCAACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 90 bp GCACTGCGGAGTCAGATGTGTAAGAGGTCCTCGTCGCTGTCGTCATaGAAGGACACCAGCTTGGTGGAGCTCACTGTCTTCTGCTGTGCA +
Preference number: 1 (lower is better)
Translates to: ALRSQMCKRSSSLSS*KDTSLVELTVFCCA
Trigger: TGCACAGCAGAAGACAGTGAGCTCCACCAAGCTGGTGTCCTTCCATGACGACAGCGACGAGGACCTCTTACACATCTGACTCCGCAGTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 90 bp CCCGGAAGTAATAAGTGTATTCGCCAGCGCTCACGATGGTGTCGTTaGGGCCCAGGGGCTTCAGGTCATACAAGTTGCCATGCCTTGGGT +
Preference number: 1 (lower is better)
Translates to: PGSNKCIRQRSRWCR*GPGASGHTSCHALG
Trigger: ACCCAAGGCATGGCAACTTGTATGACCTGAAGCCCCTGGGCCTCAACGACACCATCGTGAGCGCTGGCGAATACACTTATTACTTCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR GCA 90 bp ATAGAACAGGCAAACTCTCCAAAACCTAGGCACTCGGGGACCCTGTaGACGTATGTGTGTGTGTGCTCGCACGCACGTGTGTGTGCCCTT +
Preference number: 1 (lower is better)
Translates to: IEQANSPKPRHSGTL*TYVCVCSHARVCAL
Trigger: AAGGGCACACACACGTGCGTGCGAGCACACACACACATACGTGCACAGGGTCCCCGAGTGCCTAGGTTTTGGAGAGTTTGCCTGTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 90 bp ACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATaGTCCGTGGGAGCCTCTGGAAAACAACAGAACCTCGCCACAGAA +
Preference number: 1 (lower is better)
Translates to: TAHQRCGLIQTTHPA*SVGASGKQQNLATE
Trigger: TTCTGTGGCGAGGTTCTGTTGTTTTCCAGAGGCTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 90 bp ACTGACTTGGTGGTAATATGGCCGTTCTCCTGCCCTTCCTTTCCCTaGCGTGGAGGAGGCAGCTGGATCTCTTCCATCAGCCACTCTGTT +
Preference number: 1 (lower is better)
Translates to: TDLVVIWPFSCPSFP*RGGGSWISSISHSV
Trigger: AACAGAGTGGCTGATGGAAGAGATCCAGCTGCCTCCTCCACGGCAGGGAAAGGAAGGGCAGGAGAACGGCCATATTACCACCAAGTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 90 bp TCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATaGAGGGAGCTGAGGGCTTTCACTGACTTGGTGGTAATATGGCCG +
Preference number: 1 (lower is better)
Translates to: SGMVRTSSSLSWSSP*RELRAFTDLVVIWP
Trigger: CGGCCATATTACCACCAAGTCAGTGAAAGCCCTCAGCTCCCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 90 bp CTTACCTATCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTaGCTATCTTGCCGCCTTGCACACAAGCTCACCTGCACCACGACT +
Preference number: 1 (lower is better)
Translates to: LTYPTPPGHTVPNSM*LSCRLAHKLTCTTT
Trigger: AGTCGTGGTGCAGGTGAGCTTGTGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGATAGGTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 90 bp TGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGCCTCTaGAAAACAACAGAACCTCGCCACAGAAGGGAATTTCCCAGTGGA +
Preference number: 1 (lower is better)
Translates to: WSHTDHPPSMLRGSL*KTTEPRHRREFPSG
Trigger: TCCACTGGGAAATTCCCTTCTGTGGCGAGGTTCTGTTGTTTTCCAGAGGCTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 90 bp GAAATCCCTGCGGTTCCCGCTTTTCCTGACATGAGGAGACCACCTTaGACTTGTCACTTGTGGGGCAGACGTCTGAGGAAAGCTTCCCAC +
Preference number: 1 (lower is better)
Translates to: EIPAVPAFPDMRRPP*TCHLWGRRLRKASH
Trigger: GTGGGAAGCTTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATGTCAGGAAAAGCGGGAACCGCAGGGATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 90 bp GTCCCAGGACCTGGACGTCACCAGTTGTGGTCCTTCTGCAAATGCTaGCCCTTTCAGAGCAGCCCAGGGGCCCTTTATATATTTTCTGGC +
Preference number: 1 (lower is better)
Translates to: VPGPGRHQLWSFCKC*PFQSSPGALYIFSG
Trigger: GCCAGAAAATATATAAAGGGCCCCTGGGCTGCTCTGAAAGGGCCAGCATTTGCAGAAGGACCACAACTGGTGACGTCCAGGTCCTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 90 bp TGGCCGTTCTCCTGCCCTTCCTTTCCCTGCCGTGGAGGAGGCAGCTaGATCTCTTCCATCAGCCACTCTGTTTCATTCTCATCTGTCTCT +
Preference number: 1 (lower is better)
Translates to: WPFSCPSFPCRGGGS*ISSISHSVSFSSVS
Trigger: AGAGACAGATGAGAATGAAACAGAGTGGCTGATGGAAGAGATCCAGCTGCCTCCTCCACGGCAGGGAAAGGAAGGGCAGGAGAACGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 90 bp TTATATAGTACGAGACTCCGTTGTGGACGAGGGACCAGGACCCGGTaGGAGAGGAGAGCAGCCGCAGGTCGTAGGTTTTGTGTTTCTGGA +
Preference number: 1 (lower is better)
Translates to: LYSTRLRCGRGTRTR*ERRAAAGRRFCVSG
Trigger: TCCAGAAACACAAAACCTACGACCTGCGGCTGCTCTCCTCTCTCACCGGGTCCTGGTCCCTCGTCCACAACGGAGTCTCGTACTATATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 90 bp CAAAACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATaGCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCT +
Preference number: 1 (lower is better)
Translates to: QNPGHKVPPCGRSEP*LIPMTVNNQEGVGP
Trigger: AGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 90 bp GCCACCAGCTCCCCCAGGGAACACAGGCAAATGTCTAGGAATTGCTaGCTACCTGGAGGCCTGCTGGCCATTTTCTATTGTGATTTCACG +
Preference number: 1 (lower is better)
Translates to: ATSSPREHRQMSRNC*LPGGLLAIFYCDFT
Trigger: CGTGAAATCACAATAGAAAATGGCCAGCAGGCCTCCAGGTAGGCAGCAATTCCTAGACATTTGCCTGTGTTCCCTGGGGGAGCTGGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 90 bp CAGGCCACCAGCTCCCCCAGGGAACACAGGCAAATGTCTAGGAATTaGTGCCTACCTGGAGGCCTGCTGGCCATTTTCTATTGTGATTTC +
Preference number: 1 (lower is better)
Translates to: QATSSPREHRQMSRN*CLPGGLLAIFYCDF
Trigger: GAAATCACAATAGAAAATGGCCAGCAGGCCTCCAGGTAGGCAGCAATTCCTAGACATTTGCCTGTGTTCCCTGGGGGAGCTGGTGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 90 bp ATGGTGTCGTTGAGGCCCAGGGGCTTCAGGTCATACAAGTTGCCATaGCTTGGGTCTTTCACCTCACAGTTGTCCCCTTCCACTCTGACA +
Preference number: 1 (lower is better)
Translates to: MVSLRPRGFRSYKLP*LGSFTSQLSPSTLT
Trigger: TGTCAGAGTGGAAGGGGACAACTGTGAGGTGAAAGACCCAAGGCATGGCAACTTGTATGACCTGAAGCCCCTGGGCCTCAACGACACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 90 bp CCTCCCTCCAGCATGAGGCCAAGTGCAATGCTAGGGCCGAGGCTCTaGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACACACTGTGC +
Preference number: 1 (lower is better)
Translates to: PPSSMRPSAMLGPRL*PMIFHAVSVSHTLC
Trigger: GCACAGTGTGTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCATTGCACTTGGCCTCATGCTGGAGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 90 bp TGGAAAACAACAGAACCTCGCCACAGAAGGGAATTTCCCAGTGGATaGTCACAGGCCACCAGCTCCCCCAGGGAACACAGGCAAATGTCT +
Preference number: 1 (lower is better)
Translates to: WKTTEPRHRREFPSG*SQATSSPREHRQMS
Trigger: AGACATTTGCCTGTGTTCCCTGGGGGAGCTGGTGGCCTGTGACCATCCACTGGGAAATTCCCTTCTGTGGCGAGGTTCTGTTGTTTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 90 bp ATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTaGGAGCCTCTGGAAAACAACAGAACCTCGCCACAGAAGGGAATT +
Preference number: 1 (lower is better)
Translates to: INGVVSYRPPTQHAP*EPLENNRTSPQKGI
Trigger: AATTCCCTTCTGTGGCGAGGTTCTGTTGTTTTCCAGAGGCTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 90 bp CCCGCTTTTCCTGACATGAGGAGACCACCTTGGACTTGTCACTTGTaGGGCAGACGTCTGAGGAAAGCTTCCCACAGACCCGGAAGTAAT +
Preference number: 1 (lower is better)
Translates to: PAFPDMRRPPWTCHL*GRRLRKASHRPGSN
Trigger: ATTACTTCCGGGTCTGTGGGAAGCTTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATGTCAGGAAAAGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR TCA 90 bp CTTGGGGCAAAACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTaGGCCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGT +
Preference number: 1 (lower is better)
Translates to: LGAKPWAQGTALWPI*AMPYSNDCKQSGRS
Trigger: ACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTTTTGCCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 90 bp TCTTGCCGCCTTGCACACAAGCTCACCTGCACCACGACTGCCCGTTaGCCCCATTCTCACAGAACAATGTCCAGAACTGACAGCAAGTAT +
Preference number: 1 (lower is better)
Translates to: SCRLAHKLTCTTTAR*PHSHRTMSRTDSKY
Trigger: ATACTTGCTGTCAGTTCTGGACATTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTGCAAGGCGGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 90 bp TCTTTCTCCCATCGACAGAGGTGTCAACAGCCGTCCAAGGTTTCCTaGCTGTGCTTAGGCCAGTCAGGTCGTACTCATTTCCAGCCAGGT +
Preference number: 1 (lower is better)
Translates to: SFSHRQRCQQPSKVS*LCLGQSGRTHFQPG
Trigger: ACCTGGCTGGAAATGAGTACGACCTGACTGGCCTAAGCACAGTCAGGAAACCTTGGACGGCTGTTGACACCTCTGTCGATGGGAGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR TCA 90 bp TACGTGACAACAACTTTGTCACCTATGACACCCAGCTTCTGCGTGTaGACGAGTCCCAGGACCTGGACGTCACCAGTTGTGGTCCTTCTG +
Preference number: 1 (lower is better)
Translates to: YVTTTLSPMTPSFCV*TSPRTWTSPVVVLL
Trigger: CAGAAGGACCACAACTGGTGACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 90 bp CCTGGCATATGTTGGCTCCAGAGCACGCCGGGTTTCTGGAGCTTGTaGTGGAGGAAAGTTGGATCTCATACAGGTAGTTGTCCCCATTGG +
Preference number: 1 (lower is better)
Translates to: PGICWLQSTPGFWSL*WRKVGSHTGSCPHW
Trigger: CCAATGGGGACAACTACCTGTATGAGATCCAACTTTCCTCCATCACAAGCTCCAGAAACCCGGCGTGCTCTGGAGCCAACATATGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 90 bp CCAAAACCTAGGCACTCGGGGACCCTGTGCACGTATGTGTGTGTGTaGTCGCACGCACGTGTGTGTGCCCTTAAGAAACAGAAAGCAAAA +
Preference number: 1 (lower is better)
Translates to: PKPRHSGTLCTYVCV*SHARVCALKKQKAK
Trigger: TTTTGCTTTCTGTTTCTTAAGGGCACACACACGTGCGTGCGAGCACACACACACATACGTGCACAGGGTCCCCGAGTGCCTAGGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 90 bp CTTACTGTGACAGTCACAACAGGCTCCAAGTTCTGGGCTTGCTTCTaGCTTACCTATCCAACACCCCCAGGCCATACTGTCCCCAACTCA +
Preference number: 1 (lower is better)
Translates to: LTVTVTTGSKFWACF*LTYPTPPGHTVPNS
Trigger: TGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGATAGGTAAGGCAGAAGCAAGCCCAGAACTTGGAGCCTGTTGTGACTGTCACAGTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 90 bp AGTGAAGGAGCCCTGATCTTTTTCATACTTCATCTGGCAAGCCGATaGATATCGGTTGCAGCCCGGCACTGGATTCAGAGGCCGACACAC +
Preference number: 1 (lower is better)
Translates to: SEGALIFFILHLASR*ISVAARHWIQRPTH
Trigger: GTGTGTCGGCCTCTGAATCCAGTGCCGGGCTGCAACCGATATGCATCGGCTTGCCAGATGAAGTATGAAAAAGATCAGGGCTCCTTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR GCA 90 bp ACCCCACTGCGCTGCCCTGGCATCCAGGAATGTAAGGGAGAGGATTaGAAACGCTCAAATAGAAAGTCCTCTTTCTCCCATCGACAGAGG +
Preference number: 1 (lower is better)
Translates to: TPLRCPGIQECKGED*KRSNRKSSFSHRQR
Trigger: CCTCTGTCGATGGGAGAAAGAGGACTTTCTATTTGAGCGTTTGCAATCCTCTCCCTTACATTCCTGGATGCCAGGGCAGCGCAGTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTaGCCTTTGGTAACCACCATTCCACTCTCTGCTTCTGAGTCCAAC +
Preference number: 1 (lower is better)
Translates to: TSAPFHQHLLTSCTL*PLVTTIPLSASESN
Trigger: GTTGGACTCAGAAGCAGAGAGTGGAATGGTGGTTACCAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 90 bp AGTGCATGTCTGCTTGTCCAGGGAGATGAGCATGGGCCTATTGGTTaGCCTGGCCTCAGGCCTGCACACGAAACTGATCACACTCTTATA +
Preference number: 1 (lower is better)
Translates to: SACLLVQGDEHGPIG*PGLRPAHETDHTLI
Trigger: TATAAGAGTGTGATCAGTTTCGTGTGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCATGCTCATCTCCCTGGACAAGCAGACATGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 90 bp TGTAATCCAGTTTCATTGATTGCAGCCGTCCAAAGGATGCCCCCTTaGTGCCTGAGAGCAGACAGACTCCTCCGTCCTTACAGCCTCCTT +
Preference number: 1 (lower is better)
Translates to: CNPVSLIAAVQRMPP*CLRADRLLRPYSLL
Trigger: AAGGAGGCTGTAAGGACGGAGGAGTCTGTCTGCTCTCAGGCACCAAGGGGGCATCCTTTGGACGGCTGCAATCAATGAAACTGGATTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 90 bp CACAGATGCTCATGTAAACCAACCCCTTCTCGCTGTAAGCAGCTGTaGATCCCGCCCTGCCACTTAAGGAGCTCAGATCAAACAGGTGTC +
Preference number: 1 (lower is better)
Translates to: HRCSCKPTPSRCKQL*IPPCHLRSSDQTGV
Trigger: GACACCTGTTTGATCTGAGCTCCTTAAGTGGCAGGGCGGGATTCACAGCTGCTTACAGCGAGAAGGGGTTGGTTTACATGAGCATCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 90 bp AAAGGATATTTCCAGAAATCCAGTCTCGTCCATACAACCTCCTGGTaGCACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGGGTA +
Preference number: 1 (lower is better)
Translates to: KGYFQKSSLVHTTSW*HTHWLLVTRSPTGV
Trigger: TACCCCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTATGGACGAGACTGGATTTCTGGAAATATCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 90 bp GGAAAGGAAAGGAATGAAAGGAAGGAAACGAAGGAAAGAAAGACCTaGCTTCCTCCCAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTC +
Preference number: 1 (lower is better)
Translates to: GKERNERKETKERKT*LPPRESLAGSLRLL
Trigger: GAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTGGGAGGAAGTCAGGTCTTTCTTTCCTTCGTTTCCTTCCTTTCATTCCTTTCCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 90 bp GGAGGCTTTTCTCAATTCCGACTGGCCTTGCTGGCTTCCAATTCTTaGGCTCTTCAGTTTGGGTTTCTGCCTCACAGCCAGAAGCAGGTT +
Preference number: 1 (lower is better)
Translates to: GGFSQFRLALLASNS*ALQFGFLPHSQKQV
Trigger: AACCTGCTTCTGGCTGTGAGGCAGAAACCCAAACTGAAGAGCTCAAGAATTGGAAGCCAGCAAGGCCAGTCGGAATTGAGAAAAGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR GCA 90 bp TACATGATGCTCAAAGATCCATTCGCCGCGGCTTGGGGACTCATCTaGACCACACCCAGATTCCAGCTATTGCCTTCTGACACTAAGCAA +
Preference number: 1 (lower is better)
Translates to: YMMLKDPFAAAWGLI*TTPRFQLLPSDTKQ
Trigger: TTGCTTAGTGTCAGAAGGCAATAGCTGGAATCTGGGTGTGGTGCAGATGAGTCCCCAAGCCGCGGCGAATGGATCTTTGAGCATCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR GCA 90 bp TCCCATCTGGACATAAGTCGCCATCAACGTATTTCAGGACAATTATaGCATCTCTCCACTGAGGTCCGTCCCTTACCCTGCCGAGGTTCA +
Preference number: 1 (lower is better)
Translates to: SHLDISRHQRISGQL*HLSTEVRPLPCRGS
Trigger: TGAACCTCGGCAGGGTAAGGGACGGACCTCAGTGGAGAGATGGCATAATTGTCCTGAAATACGTTGATGGCGACTTATGTCCAGATGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 90 bp GTTAAAGGCAAAATTATAGAAGCATCATCGAGTGGAAGTCTTATTTaGTTGGAGGTGCTTGGCTGTCCCGCGGCTCCGTGCTCCCCTGCA +
Preference number: 1 (lower is better)
Translates to: VKGKIIEASSSGSLI*LEVLGCPAAPCSPA
Trigger: TGCAGGGGAGCACGGAGCCGCGGGACAGCCAAGCACCTCCAACCAAATAAGACTTCCACTCGATGATGCTTCTATAATTTTGCCTTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 90 bp ATACTTCATCTGGCAAGCCGATGCATATCGGTTGCAGCCCGGCACTaGATTCAGAGGCCGACACACGTTAATGTAGTATTTCCTCCACGT +
Preference number: 1 (lower is better)
Translates to: ILHLASRCISVAARH*IQRPTHVNVVFPPR
Trigger: ACGTGGAGGAAATACTACATTAACGTGTGTCGGCCTCTGAATCCAGTGCCGGGCTGCAACCGATATGCATCGGCTTGCCAGATGAAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR TCA 90 bp TACACTCATGTTGAAATCAAACAAGCCAGCCAAACCGGTACAGGCTaGGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCA +
Preference number: 1 (lower is better)
Translates to: YTHVEIKQASQTGTG*GMLQGGLLLSNRTP
Trigger: TGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTGTACCGGTTTGGCTGGCTTGTTTGATTTCAACATGAGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 90 bp CACGACTGCCCGTTGACCCCATTCTCACAGAACAATGTCCAGAACTaGCAGCAAGTATGGCTCAAGAGGCCAACTACTAGTCAACAGAGT +
Preference number: 1 (lower is better)
Translates to: HDCPLTPFSQNNVQN*QQVWLKRPTTSQQS
Trigger: ACTCTGTTGACTAGTAGTTGGCCTCTTGAGCCATACTTGCTGTCAGTTCTGGACATTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 90 bp CCATGCTGCACAGTGGATCTCCAGAATTCATTCATGTTGCATAGCTaGACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACC +
Preference number: 1 (lower is better)
Translates to: PCCTVDLQNSFMLHS*TSAPFHQHLLTSCT
Trigger: GGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGTTCAGCTATGCAACATGAATGAATTCTGGAGATCCACTGTGCAGCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 90 bp CCGACACACGTTAATGTAGTATTTCCTCCACGTGACATGTTCCCCTaGGTTGTCCATGGCATACCAGTTTCCTCCAAGGCCACCTTCAGA +
Preference number: 1 (lower is better)
Translates to: PTHVNVVFPPRDMFP*VVHGIPVSSKATFR
Trigger: TCTGAAGGTGGCCTTGGAGGAAACTGGTATGCCATGGACAACTCAGGGGAACATGTCACGTGGAGGAAATACTACATTAACGTGTGTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR TCA 90 bp CTTGAAGGTAGTACTTGGTCTTGTCAGAGGTTCCAACTTTCCGACTaGAGTGCTGATCGTTGGGCTTCACCTGGCATATGTTGGCTCCAG +
Preference number: 1 (lower is better)
Translates to: LEGSTWSCQRFQLSD*SADRWASPGICWLQ
Trigger: CTGGAGCCAACATATGCCAGGTGAAGCCCAACGATCAGCACTTCAGTCGGAAAGTTGGAACCTCTGACAAGACCAAGTACTACCTTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 90 bp ATGTTGAAATCAAACAAGCCAGCCAAACCGGTACAGGCTGAGGGATaGTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTCTA +
Preference number: 1 (lower is better)
Translates to: MLKSNKPAKPVQAEG*CRAVCFSAIEHQSL
Trigger: TAGACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTGTACCGGTTTGGCTGGCTTGTTTGATTTCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 90 bp AGGTCTGCCCACCGTCTTTGTACAGGTCAATTCTATCACGGAGGATaGGGTCTTATTTCCACCACACGGATAACCTTTGGAGTACGTGAC +
Preference number: 1 (lower is better)
Translates to: RSAHRLCTGQFYHGG*GLISTTRITFGVRD
Trigger: GTCACGTACTCCAAAGGTTATCCGTGTGGTGGAAATAAGACCGCATCCTCCGTGATAGAATTGACCTGTACAAAGACGGTGGGCAGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 90 bp AACGGCAGCAGGAACACTGGGACCCAAATCTCCTCTTGGCACCGCTaGTTTAGACAACTCACTTCATTTGAACTGCAGTTACGCAGAATG +
Preference number: 1 (lower is better)
Translates to: NGSRNTGTQISSWHR*FRQLTSFELQLRRM
Trigger: CATTCTGCGTAACTGCAGTTCAAATGAAGTGAGTTGTCTAAACCAGCGGTGCCAAGAGGAGATTTGGGTCCCAGTGTTCCTGCTGCCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 90 bp AAGGTCTCCAACGGCAGCAGGAACACTGGGACCCAAATCTCCTCTTaGCACCGCTGGTTTAGACAACTCACTTCATTTGAACTGCAGTTA +
Preference number: 1 (lower is better)
Translates to: KVSNGSRNTGTQISS*HRWFRQLTSFELQL
Trigger: TAACTGCAGTTCAAATGAAGTGAGTTGTCTAAACCAGCGGTGCCAAGAGGAGATTTGGGTCCCAGTGTTCCTGCTGCCGTTGGAGACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR TCA 90 bp CTCCTACAGCTCTCAACTGCTTTCAGGACTTCAAACTCCTTACTGTaGCAGTCACAACAGGCTCCAAGTTCTGGGCTTGCTTCTGCCTTA +
Preference number: 1 (lower is better)
Translates to: LLQLSTAFRTSNSLL*QSQQAPSSGLASAL
Trigger: TAAGGCAGAAGCAAGCCCAGAACTTGGAGCCTGTTGTGACTGTCACAGTAAGGAGTTTGAAGTCCTGAAAGCAGTTGAGAGCTGTAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 90 bp GCACTAAGGCTTAGCTGGCAGTACCGTCCCCACATATTGTGGTTCTaGTGGTGGCACCTTAGTCCTGTGAAGGTCCTCATTTGTAGAAAT +
Preference number: 1 (lower is better)
Translates to: ALRLSWQYRPHILWF*WWHLSPVKVLICRN
Trigger: ATTTCTACAAATGAGGACCTTCACAGGACTAAGGTGCCACCATCAGAACCACAATATGTGGGGACGGTACTGCCAGCTAAGCCTTAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 90 bp CAGGACAGGGCACTCCGTGCATGGGATTTAGTGGCTGACAAATATTaGTGTAGAAATCAGGGTTGGTATCGGAGGCATCATCCTCACTCT +
Preference number: 1 (lower is better)
Translates to: QDRALRAWDLVADKY*CRNQGWYRRHHPHS
Trigger: AGAGTGAGGATGATGCCTCCGATACCAACCCTGATTTCTACATCAATATTTGTCAGCCACTAAATCCCATGCACGGAGTGCCCTGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 90 bp AAGCCAGCCAAACCGGTACAGGCTGAGGGATGCTGCAGGGCGGTTTaGTTCTCAGCAATAGAACACCAGAGTCTATATACAATTCTACAA +
Preference number: 1 (lower is better)
Translates to: KPAKPVQAEGCCRAV*FSAIEHQSLYTILQ
Trigger: TTGTAGAATTGTATATAGACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTGTACCGGTTTGGCTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 90 bp TTGAAATCAAACAAGCCAGCCAAACCGGTACAGGCTGAGGGATGCTaGAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTCTATAT +
Preference number: 1 (lower is better)
Translates to: LKSNKPAKPVQAEGC*RAVCFSAIEHQSLY
Trigger: ATATAGACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTGTACCGGTTTGGCTGGCTTGTTTGATTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 90 bp CTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCAACTaGTTTCAGGACTTCAAACTCCTTACTGTGACAGTCACAACAGGC +
Preference number: 1 (lower is better)
Translates to: LSCSKAQSGPPTALN*FQDFKLLTVTVTTG
Trigger: GCCTGTTGTGACTGTCACAGTAAGGAGTTTGAAGTCCTGAAAGCAGTTGAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 90 bp AACACAGGCAAATGTCTAGGAATTGCTGCCTACCTGGAGGCCTGCTaGCCATTTTCTATTGTGATTTCACGTGTGGTCAGCAACTCTCCT +
Preference number: 1 (lower is better)
Translates to: NTGKCLGIAAYLEAC*PFSIVISRVVSNSP
Trigger: AGGAGAGTTGCTGACCACACGTGAAATCACAATAGAAAATGGCCAGCAGGCCTCCAGGTAGGCAGCAATTCCTAGACATTTGCCTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 90 bp TGTTTCGGATCCCTTGCCCAGAGTCGATATCTTGATGCAGGAATTTaGGGGGCCCTGAGTAAACATCATCATTGCAAACAAAGCGGACGA +
Preference number: 1 (lower is better)
Translates to: CFGSLAQSRYLDAGI*GALSKHHHCKQSGR
Trigger: TCGTCCGCTTTGTTTGCAATGATGATGTTTACTCAGGGCCCCTCAAATTCCTGCATCAAGATATCGACTCTGGGCAAGGGATCCGAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 90 bp AACTCCATGTTCATTGTTTTGATGAACAGGACCACACCCCGAGGTTaGCCTGGAGAAGGTAAAGAAATCGGATCTAGAAAGAGCCAAGGG +
Preference number: 1 (lower is better)
Translates to: NSMFIVLMNRTTPRG*PGEGKEIGSRKSQG
Trigger: CCCTTGGCTCTTTCTAGATCCGATTTCTTTACCTTCTCCAGGCCAACCTCGGGGTGTGGTCCTGTTCATCAAAACAATGAACATGGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 90 bp TGTACAATGGATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTaGCATCTTAGTCGTGTGAAGGTCCTTGTTTGTAGGAATGCCTGG +
Preference number: 1 (lower is better)
Translates to: CTMDRTSPKCSLITR*HLSRVKVLVCRNAW
Trigger: CCAGGCATTCCTACAAACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATCCATTGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 90 bp GGGTGTGCCGCCTCTGTAGTTCAGTTGGATCATCCCATCATAATATaGAAGCTTCGCATTACTCAGACCCAAGTTCCAAGTCTTCTCATC +
Preference number: 1 (lower is better)
Translates to: GCAASVVQLDHPIII*KLRITQTQVPSLLI
Trigger: GATGAGAAGACTTGGAACTTGGGTCTGAGTAATGCGAAGCTTTCATATTATGATGGGATGATCCAACTGAACTACAGAGGCGGCACACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR TCA 90 bp CCCTTGCCCAGAGTCGATATCTTGATGCAGGAATTTGAGGGGCCCTaGGTAAACATCATCATTGCAAACAAAGCGGACGATAAAAGCATC +
Preference number: 1 (lower is better)
Translates to: PLPRVDILMQEFEGP*VNIIIANKADDKSI
Trigger: GATGCTTTTATCGTCCGCTTTGTTTGCAATGATGATGTTTACTCAGGGCCCCTCAAATTCCTGCATCAAGATATCGACTCTGGGCAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR GCA 90 bp CATAGTCACCATGCTGCACAGTGGATCTCCAGAATTCATTCATGTTaGATAGCTGAACCTCTGCACCCTTTCACCAACATCTGCTCACTT +
Preference number: 1 (lower is better)
Translates to: HSHHAAQWISRIHSC*IAEPLHPFTNICSL
Trigger: AAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGTTCAGCTATGCAACATGAATGAATTCTGGAGATCCACTGTGCAGCATGGTGACTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 90 bp GAAGGCAGATTGGACCCAAAGTTAACACCTACGACCAGGAGACTCTaGAGAAAAATGAAAGTGCTGCCTCATAAAGGGTCAACGAGAACA +
Preference number: 1 (lower is better)
Translates to: EGRLDPKLTPTTRRL*RKMKVLPHKGSTRT
Trigger: TGTTCTCGTTGACCCTTTATGAGGCAGCACTTTCATTTTTCTCCAGAGTCTCCTGGTCGTAGGTGTTAACTTTGGGTCCAATCTGCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 90 bp CAGAGTGGAACCGGAGAAGTAAGAAAGGACATGAGTGTACCTCCCTaGGCCATGGGATTCTTCAGAGTCAGTAAAGGATATTTCCAGAAA +
Preference number: 1 (lower is better)
Translates to: QSGTGEVRKDMSVPP*AMGFFRVSKGYFQK
Trigger: TTTCTGGAAATATCCTTTACTGACTCTGAAGAATCCCATGGCTCAGGGAGGTACACTCATGTCCTTTCTTACTTCTCCGGTTCCACTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 90 bp CAATCTTTGGGCAGGTTGTTTGAATTCACCAGCCGGCAAAAATACTaGCAAATGTGCTCTGTACGCCCAGGCTTGAAGATATCATGCAAA +
Preference number: 1 (lower is better)
Translates to: QSLGRLFEFTSRQKY*QMCSVRPGLKISCK
Trigger: TTTGCATGATATCTTCAAGCCTGGGCGTACAGAGCACATTTGTCAGTATTTTTGCCGGCTGGTGAATTCAAACAACCTGCCCAAAGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 90 bp CCTTTGAGTATTTGTAGGACACGTTGGAACTTCTCCTACAGCAAGTaGTCAGCTTACTTATCACTGTTTCCCTCCTCTCCTTCTTGTAGA +
Preference number: 1 (lower is better)
Translates to: PLSICRTRWNFSYSK*SAYLSLFPSSPSCR
Trigger: TCTACAAGAAGGAGAGGAGGGAAACAGTGATAAGTAAGCTGACCACTTGCTGTAGGAGAAGTTCCAACGTGTCCTACAAATACTCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 90 bp CACACACACACACAAACACACAAATCAATCTTTGGGCAGGTTGTTTaGATTCACCAGCCGGCAAAAATACTGACAAATGTGCTCTGTACG +
Preference number: 1 (lower is better)
Translates to: HTHTQTHKSIFGQVV*IHQPAKILTNVLCT
Trigger: CGTACAGAGCACATTTGTCAGTATTTTTGCCGGCTGGTGAATTCAAACAACCTGCCCAAAGATTGATTTGTGTGTTTGTGTGTGTGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 90 bp TGGCATCTTAGTCGTGTGAAGGTCCTTGTTTGTAGGAATGCCTGGTaGTGGGAAGAAACTTCATCTCAAATGATTCAGGGAAAAAGAGTT +
Preference number: 1 (lower is better)
Translates to: WHLSRVKVLVCRNAW*WEETSSQMIQGKRV
Trigger: AACTCTTTTTCCCTGAATCATTTGAGATGAAGTTTCTTCCCATCACCAGGCATTCCTACAAACAAGGACCTTCACACGACTAAGATGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 90 bp ACACACACACACACACACACACACACAAACACACAAATCAATCTTTaGGCAGGTTGTTTGAATTCACCAGCCGGCAAAAATACTGACAAA +
Preference number: 1 (lower is better)
Translates to: THTHTHTHTNTQINL*AGCLNSPAGKNTDK
Trigger: TTTGTCAGTATTTTTGCCGGCTGGTGAATTCAAACAACCTGCCCAAAGATTGATTTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 90 bp GTTCATAAGAACCAGATTTCCACTTCACTGTGGATTTCCTTGGTGTaGGGTTTGCCTATTCCATCTTTAGCACCCCAGTTCTTATTCTAT +
Preference number: 1 (lower is better)
Translates to: VHKNQISTSLWISLV*GLPIPSLAPQFLFY
Trigger: ATAGAATAAGAACTGGGGTGCTAAAGATGGAATAGGCAAACCCCACACCAAGGAAATCCACAGTGAAGTGGAAATCTGGTTCTTATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 90 bp GAAAAGGAAAGAAAGAAAGAGGAAAAAGGAAGGAAAGGAAAGGAATaGAAGGAAGGAAACGAAGGAAAGAAAGACCTGACTTCCTCCCAG +
Preference number: 1 (lower is better)
Translates to: EKERKKEEKGRKGKE*KEGNEGKKDLTSSQ
Trigger: CTGGGAGGAAGTCAGGTCTTTCTTTCCTTCGTTTCCTTCCTTTCATTCCTTTCCTTTCCTTCCTTTTTCCTCTTTCTTTCTTTCCTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 90 bp CTGTCTCTTCTTCCTTATTCACCTTTGAGTATTTGTAGGACACGTTaGAACTTCTCCTACAGCAAGTGGTCAGCTTACTTATCACTGTTT +
Preference number: 1 (lower is better)
Translates to: LSLLPYSPLSICRTR*NFSYSKWSAYLSLF
Trigger: AAACAGTGATAAGTAAGCTGACCACTTGCTGTAGGAGAAGTTCCAACGTGTCCTACAAATACTCAAAGGTGAATAAGGAAGAAGAGACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 90 bp GATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGTAACTTCCTaGTTCCATGCAGGTAGCTCTCAGTCACTGCTGAGTAATTTAAGA +
Preference number: 1 (lower is better)
Translates to: DVESKKFVYNTGVTS*FHAGSSQSLLSNLR
Trigger: TCTTAAATTACTCAGCAGTGACTGAGAGCTACCTGCATGGAAGCAGGAAGTTACTCCAGTGTTATAAACAAACTTCTTAGACTCAACATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 90 bp TTCCCTATCTTGGCTATTGTGAATAATGCTGCAATGAACAGGGGCTaGAGAGATCTCTTCAAGGTACTGACTTCATTTCTTTTGGATATA +
Preference number: 1 (lower is better)
Translates to: FPILAIVNNAAMNRG*RDLFKVLTSFLLDI
Trigger: TATATCCAAAAGAAATGAAGTCAGTACCTTGAAGAGATCTCTGCAGCCCCTGTTCATTGCAGCATTATTCACAATAGCCAAGATAGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 90 bp AATTTTAAATACACAAAGCAGTATCATAGTCACCATGCTGCACAGTaGATCTCCAGAATTCATTCATGTTGCATAGCTGAACCTCTGCAC +
Preference number: 1 (lower is better)
Translates to: NFKYTKQYHSHHAAQ*ISRIHSCCIAEPLH
Trigger: GTGCAGAGGTTCAGCTATGCAACATGAATGAATTCTGGAGATCCACTGTGCAGCATGGTGACTATGATACTGCTTTGTGTATTTAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 90 bp ACATTAAACATAAAAATCTTCCCAATGCCAGAGACGTTATATCCTTaGGAACTGTTTAGCGGATTAAGATTAAACACAAATCCACTGTTG +
Preference number: 1 (lower is better)
Translates to: TLNIKIFPMPETLYP*ELFSGLRLNTNPLL
Trigger: CAACAGTGGATTTGTGTTTAATCTTAATCCGCTAAACAGTTCGCAAGGATATAACGTCTCTGGCATTGGGAAGATTTTTATGTTTAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGAGAGGGCACGGCTCAGTaGCAGCCTGCGGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGEGTAQ*QPAGPE
Trigger: CTCTGGCCCCGCAGGCTGGCACTGAGCCGTGCCCTC...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CAA 90 bp AGGCTGAGCACCGCGCCGACTGCCTGGCTCCGTTCTGACAGCCCCTaGTGCATCTGCCCGTCGTCCCCGGGATTCTCGCTGTCAAAGCCC +
Preference number: 2 (lower is better)
Translates to: RLSTAPTAWLRSDSP*CICPSSPGFSLSKP
Trigger: GGGCTTTGACAGCGAGAATCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGTCGGCGCGGTGCTCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACTGTCCCGCGGCTCCGTaGTCCCCTGCAGGCACTGCG +
Preference number: 2 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDCPAAP*SPAGTA
Trigger: CGCAGTGCCTGCAGGGGAGCACGGAGCCGCGGGACA...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGCACACTGGCTCCTTGTaGCCCGATCGCCAACAGGGG +
Preference number: 2 (lower is better)
Translates to: RSLARRPAACARRRRECMHTGSL*PDRQQG
Trigger: CCCCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTG...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCTCCCTCCTCCTCCATaGTGTGACCGCCCGGCCTCC +
Preference number: 2 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPLPPPP*CDRPAS
Trigger: GGAGGCCGGGCGGTCACAGCATGGAGGAGGAGGGAG...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACATGTCCCGCGGCTCCGTaGTCCCCTGCAGGCACTGCG +
Preference number: 2 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTCPAAP*SPAGTA
Trigger: CGCAGTGCCTGCAGGGGAGCACGGAGCCGCGGGACA...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGAGCAGGTCCCTGCATATaGCCCTCCTTACAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGAGPCI*PSLQRG
Trigger: CCCTCTCTGTAAGGAGGGGCATATGCAGGGACCTGC...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCCTGGAGAGGTCGTACTaGTCCAGCGTGGAGGGGTCG +
Preference number: 2 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSLERSY*SSVEGS
Trigger: CGACCCCTCCACGCTGGAGCAGTACGACCTCTCCAG...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTCAAACCGGTACAGGCTaGGGGATGCTGCAGGGCGGT +
Preference number: 2 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCQTGTG*GMLQGG
Trigger: ACCGCCCTGCAGCATCCCTCAGCCTGTACCGGTTTG...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCCACACTGGCTCCTTGTaGCCCGATCGCCAACAGGGG +
Preference number: 2 (lower is better)
Translates to: LLKGIALCVSHWVGALCPHTGSL*PDRQQG
Trigger: CCCCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTG...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTCACACTGGCTCCTTGTaGCCCGATCGCCAACAGGGG +
Preference number: 2 (lower is better)
Translates to: QREPRRQSEASQLSTATAHTGSL*PDRQQG
Trigger: CCCCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTG...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTCGTCCTCACGCTCCTaGAGGGCATTGCTCTGTGCG +
Preference number: 2 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMSSSRS*RALLCA
Trigger: CGCACAGAGCAATGCCCTTCAGGAGCGTGAGGACGA...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGAGGTACATCACACCCCTaGTGGCAGGAAGAAACGGTG +
Preference number: 2 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGGTSHP*WQEETV
Trigger: CACCGTTTCTTCCTGCCAGCAGGGGTGTGATGTACC...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGCAGCATGAGGCCAAGTaGAATGCTAGGGCCGAGGCT +
Preference number: 2 (lower is better)
Translates to: RSLARRPAACARRRRECMQHEAK*NARAEA
Trigger: AGCCTCGGCCCTAGCATTGCACTTGGCCTCATGCTG...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCTCCCTCCTCCTCCATaGTGTGACCGCCCGGCCTCC +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRLPPPP*CDRPAS
Trigger: GGAGGCCGGGCGGTCACAGCATGGAGGAGGAGGGAG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGAAGACCCCACTGCGCTaGCCTGGCATCCAGGAATGT +
Preference number: 2 (lower is better)
Translates to: RSLARRPAACARRRRECMKTPLR*PGIQEC
Trigger: ACATTCCTGGATGCCAGGGCAGCGCAGTGGGGTCTT...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCGTCCGTCCCTTACCCTaGCGAGGTTCACGGGCTTGG +
Preference number: 2 (lower is better)
Translates to: LLKGIALCVSHWVGALCPVRPLP*RGSRAW
Trigger: CCAAGCCCGTGAACCTCGGCAGGGTAAGGGACGGAC...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCCGTCCCTTACCCTaGCGAGGTTCACGGGCTTGG +
Preference number: 2 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCVRPLP*RGSRAW
Trigger: CCAAGCCCGTGAACCTCGGCAGGGTAAGGGACGGAC...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGAGACAGGCAGGCAGATaGGTAACTCGCTCGGGAACG +
Preference number: 2 (lower is better)
Translates to: RSLARRPAACARRRRECMRQAGR*VTRSGT
Trigger: CGTTCCCGAGCGAGTTACCCATCTGCCTGCCTGTCT...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGCCTAAAGCCGCTGGGTaGGGCAGGGCAAATCAGGCA +
Preference number: 2 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMPKAAG*GRANQA
Trigger: TGCCTGATTTGCCCTGCCCCACCCAGCGGCTTTAGG...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGCTGGTGGAGAAGCGCTaGTTCCCACACTTGTCACCG +
Preference number: 2 (lower is better)
Translates to: RSLARRPAACARRRRECMLVEKR*FPHLSP
Trigger: CGGTGACAAGTGTGGGAACCAGCGCTTCTCCACCAG...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTGGAAGGAGTGGGGCCTaGCCTCCTTCACCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPGRSGA*PPSPSP
Trigger: GGGAGAGGGTGAAGGAGGTCAGGCCCCACTCCTTCC...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTGGAAGGAGTGGGGCCTaGCCTCCTTCACCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: APCDPIANRGKTCVPISAGRSGA*PPSPSP
Trigger: GGGAGAGGGTGAAGGAGGTCAGGCCCCACTCCTTCC...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCGGCAGGAGAATCCCTTaGACCCGGGAGGCAGAGATT +
Preference number: 2 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVGRRIP*TREAEI
Trigger: AATCTCTGCCTCCCGGGTTCAAGGGATTCTCCTGCC...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCCTGAGTGGCACCAGATaGCCTCACCTGGGTTGTGAG +
Preference number: 2 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVLSGTR*PHLGCE
Trigger: CTCACAACCCAGGTGAGGTCATCTGGTGCCACTCAG...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCCACTCGGGGACCCTGTaGACGTATGTGTGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSHSGTL*TYVCVC
Trigger: GCACACACACACATACGTGCACAGGGTCCCCGAGTG...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGCACTCGGGGACCCTGTaGACGTATGTGTGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMHSGTL*TYVCVC
Trigger: GCACACACACACATACGTGCACAGGGTCCCCGAGTG...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTCTCCCTCCTCCTCCATaGTGTGACCGCCCGGCCTCC +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSLPPPP*CDRPAS
Trigger: GGAGGCCGGGCGGTCACAGCATGGAGGAGGAGGGAG...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCGTACAGGCTGAGGGATaGTGCAGGGCGGTTTGCTTC +
Preference number: 2 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVVQAEG*CRAVCF
Trigger: GAAGCAAACCGCCCTGCAGCATCCCTCAGCCTGTAC...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACCCGGGAGGCAGAGATTaGAGTGAGCCGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDPGGRD*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAATCTCTGCCTCCCGG...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCCAGGCCAGCGGCGTGTaGCAGGAGAAGAAGAGAGTG +
Preference number: 2 (lower is better)
Translates to: LLKGIALCVSHWVGALCPQASGV*QEKKRV
Trigger: CACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTG...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCCGTAGTCCGCAGTTGTaGTACACCACAGCTTCGCCC +
Preference number: 2 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVRSPQL*YTTASP
Trigger: GGGCGAAGCTGTGGTGTAGCACAACTGCGGACTACG...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGACAATCAGGAAGGAGTaGGGCCTGACCTCCTTCACC +
Preference number: 2 (lower is better)
Translates to: RSLARRPAACARRRRECMTIRKE*GLTSFT
Trigger: GGTGAAGGAGGTCAGGCCCCACTCCTTCCTGATTGT...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCTCTGTCTGCCATCGCTaGTGGTGCAGGCCGACCCAT +
Preference number: 2 (lower is better)
Translates to: LLKGIALCVSHWVGALCPSVCHR*WCRPTH
Trigger: ATGGGTCGGCCTGCACCACCAGCGATGGCAGACAGA...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGGGCCTGGAGTTCACTTaGCTCTCGCTGCAGGTGAAT +
Preference number: 2 (lower is better)
Translates to: RSLARRPAACARRRRECMGLEFT*LSLQVN
Trigger: ATTCACCTGCAGCGAGAGCCAAGTGAACTCCAGGCC...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CAA 90 bp GCCGCGGCTTGGGGACTCATCTGCACCACACCCAGATTCCAGCTATaGCCTTCTGACACTAAGCAAGACCCCACTGCGCTGCCCTGGCAT +
Preference number: 2 (lower is better)
Translates to: AAAWGLICTTPRFQL*PSDTKQDPTALPWH
Trigger: ATGCCAGGGCAGCGCAGTGGGGTCTTGCTTAGTGTCAGAAGGCAATAGCTGGAATCTGGGTGTGGTGCAGATGAGTCCCCAAGCCGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CAA 90 bp CCAGCTTCTGCGTGTGAACGAGTCCCAGGACCTGGACGTCACCAGTaGTGGTCCTTCTGCAAATGCTGGCCCTTTCAGAGCAGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: PASACERVPGPGRHQ*WSFCKCWPFQSSPG
Trigger: CCCTGGGCTGCTCTGAAAGGGCCAGCATTTGCAGAAGGACCACAACTGGTGACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACACCACGACTGCCCGTTaGCCCCATTCTCACAGAACA +
Preference number: 2 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDTTTAR*PHSHRT
Trigger: TGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGT...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCGCCTCGCAGGCAGTCTaGGGCTTCTCAGCTCAGCAC +
Preference number: 2 (lower is better)
Translates to: PVWASLLINGVVSYRPPTASQAV*GFSAQH
Trigger: GTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGC...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGTTCCAGCCAGGTCGGTaGCTTGGCAGTCCACTGGAG +
Preference number: 2 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEFQPGR*LGSPLE
Trigger: CTCCAGTGGACTGCCAAGTCACCGACCTGGCTGGAA...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACACCGTCCAAGGTTTCCTaGCTGTGCTTAGGCCAGTCA +
Preference number: 2 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTPSKVS*LCLGQS
Trigger: TGACTGGCCTAAGCACAGTCAGGAAACCTTGGACGG...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTGGCTCTCGCTGCAGGTaGATCGGATGGTGGTTGACT +
Preference number: 2 (lower is better)
Translates to: QREPRRQSEASQLSTATAGSRCR*IGWWLT
Trigger: AGTCAACCACCATCCGATTCACCTGCAGCGAGAGCC...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGCTGTGCTTGGGTTGGTaGCCTGGCAGTCATCATGCT +
Preference number: 2 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMLCLGW*PGSHHA
Trigger: AGCATGATGACTGCCAGGTCACCAACCCAAGCACAG...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCCGCTGTAAGCAGCTGTaGATCCCGCCCTGCCACTTA +
Preference number: 2 (lower is better)
Translates to: LLKGIALCVSHWVGALCPRCKQL*IPPCHL
Trigger: TAAGTGGCAGGGCGGGATTCACAGCTGCTTACAGCG...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCCCGGGAGTCCCAGCTaGAGTAGTAAGTGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPPGSPS*SSKCSC
Trigger: ACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGG...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTACCATCTGCACCTCCTaGGGCTTCACGGCGCAGGCA +
Preference number: 2 (lower is better)
Translates to: APCDPIANRGKTCVPISATICTS*GFTAQA
Trigger: TGCCTGCGCCGTGAAGCCTCAGGAGGTGCAGATGGT...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTCGGCAGTCTCGTGACTaGACTCGGGGATCCCGTCCT +
Preference number: 2 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLRQSRD*TRGSRP
Trigger: AGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCG...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGCAGTCGGCAGTCTCGTaGCTGAACTCGGGGATCCCG +
Preference number: 2 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQQSAVS*LNSGIP
Trigger: CGGGATCCCCGAGTTCAGTCACGAGACTGCCGACTG...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGAGCAGTCCTCAGCACTaGTTTACCCTGGGCCATACT +
Preference number: 2 (lower is better)
Translates to: RSLARRPAACARRRRECMSSPQH*FTLGHT
Trigger: AGTATGGCCCAGGGTAAATCAGTGCTGAGGACTGCT...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677704.1
3UTR-3UTR GCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGGCAGGAAAGGCGCTaGCGCCAGAATAAGAACACC +
Preference number: 2 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMWQERR*RQNKNT
Trigger: GGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCA...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTGTACAGGCTGAGGGATaGTGCAGGGCGGTTTGCTTC +
Preference number: 2 (lower is better)
Translates to: QREPRRQSEASQLSTATAVQAEG*CRAVCF
Trigger: GAAGCAAACCGCCCTGCAGCATCCCTCAGCCTGTAC...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACGCCCCCTGGGTAGAATaGCTGAGGACCAGCATCTTT +
Preference number: 2 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDAPWVE*LRTSIF
Trigger: AAAGATGCTGGTCCTCAGGCATTCTACCCAGGGGGC...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCGCAGGTCCCTGCATATaGCCCTCCTTACAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: LLKGIALCVSHWVGALCPAGPCI*PSLQRG
Trigger: CCCTCTCTGTAAGGAGGGGCATATGCAGGGACCTGC...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTGGATGGGCAGGTCCCTaGATATGCCCCTCCTTACAG +
Preference number: 2 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPGWAGP*ICPSLQ
Trigger: CTGTAAGGAGGGGCATATGCAGGGACCTGCCCATCC...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACGCTATCTTGCCGCCTTaGACACAAGCTCACCTGCAC +
Preference number: 2 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDAILPP*TQAHLH
Trigger: GTGCAGGTGAGCTTGTGTGCAAGGCGGCAAGATAGC...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTCAGCCACAGCTCCCATaGCCAACCTCCCATCTGGTT +
Preference number: 2 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCQPQLP*PTSHLV
Trigger: AACCAGATGGGAGGTTGGGCATGGGAGCTGTGGCTG...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATGGTCAGAACCTCATCCTGAACCAGGCCCGGGCTaGAGACCACAGGAACCCACA +
Preference number: 2 (lower is better)
Translates to: QLPCPSELSPLGWSEPHPEPGPG*RPQEPT
Trigger: TGTGGGTTCCTGTGGTCTGCAGCCCGGGCCTGGTTC...AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGCACCGGGCCGGTCTTTaGCATTCCCAAGTTACTGAT +
Preference number: 2 (lower is better)
Translates to: RSLARRPAACARRRRECMHRAGL*HSQVTD
Trigger: ATCAGTAACTTGGGAATGGCAAAGACCGGCCCGGTG...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp CAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATGGTCAGAACCTCATCCTGAACATTCGGTCGCTTaGTCGCAGGCCAGCGGCGTG +
Preference number: 2 (lower is better)
Translates to: QLPCPSELSPLGWSEPHPEHSVA*SQASGV
Trigger: CACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC...AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACACAATCAGGAAGGAGTaGGGCCTGACCTCCTTCACC +
Preference number: 2 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDTIRKE*GLTSFT
Trigger: GGTGAAGGAGGTCAGGCCCCACTCCTTCCTGATTGT...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GTCACCTATGACACCCAGCTTCTGCGTGTGAACGAGTCCCAGGACCTGGACGTCCTTGGGGCAAAACCCTaGGCACAAGGTACCGCCCTG +
Preference number: 2 (lower is better)
Translates to: VTYDTQLLRVNESQDLDVLGAKP*AQGTAL
Trigger: CAGGGCGGTACCTTGTGCCCAGGGTTTTGCCCCAAG...GACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGGTGTCATAGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGATTAGCAGGCAGCCAGTaGTGCAGACAACATGCCTTT +
Preference number: 2 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGLAGSQ*CRQHAF
Trigger: AAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAA...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCCCCACCATCACTTCTTaGTTGTCACCGAGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVPTITS*LSPRPA
Trigger: TGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGG...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACCTCCGTGGGAGCCTCTaGAAAACAACAGAACCTCGC +
Preference number: 2 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDLRGSL*KTTEPR
Trigger: GCGAGGTTCTGTTGTTTTCCAGAGGCTCCCACGGAG...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTCAGGTGTCCTGTGCTTaGGTTGGTGACCTGGCAGTC +
Preference number: 2 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPQVSCA*VGDLAV
Trigger: GACTGCCAGGTCACCAACCCAAGCACAGGACACCTG...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CAA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTaGCCGCCTTGCACACAAGCTCACCTGCACCACGACTGCCCGTTG +
Preference number: 2 (lower is better)
Translates to: SNTPRPYCPQLNVAI*PPCTQAHLHHDCPL
Trigger: CAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCAGCTGCCCCATACACTaGCAGCCTCACCATCTCAAG +
Preference number: 2 (lower is better)
Translates to: LLKGIALCVSHWVGALCPSCPIH*QPHHLK
Trigger: CTTGAGATGGTGAGGCTGTCAGTGTATGGGGCAGCT...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGCAAACCGGTACAGGCTaGGGGATGCTGCAGGGCGGT +
Preference number: 2 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLQTGTG*GMLQGG
Trigger: ACCGCCCTGCAGCATCCCTCAGCCTGTACCGGTTTG...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACCATACAACCTCCTGGTaGCACACACACTGGCTCCTT +
Preference number: 2 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDHTTSW*HTHWLL
Trigger: AAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTATG...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGGCCTCGCAGGCAGTCTaGGGCTTCTCAGCTCAGCAC +
Preference number: 2 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLASQAV*GFSAQH
Trigger: GTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGC...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACACCTCACCTGGGTTGTaGGCCCCTCATTTTCACTCT +
Preference number: 2 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDTSPGL*APHFHS
Trigger: AGAGTGAAAATGAGGGGCTCACAACCCAGGTGAGGT...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGACCTCACCTGGGTTGTaGGCCCCTCATTTTCACTCT +
Preference number: 2 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMTSPGL*APHFHS
Trigger: AGAGTGAAAATGAGGGGCTCACAACCCAGGTGAGGT...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTGAGCACACTCAAACGTaGTCCTGGTGGAGAAGCGCT +
Preference number: 2 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPEHTQT*SWWRSA
Trigger: AGCGCTTCTCCACCAGGATCACGTTTGAGTGTGCTC...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGGGCTCTCGCTGCAGGTaGATCGGATGGTGGTTGACT +
Preference number: 2 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEGSRCR*IGWWLT
Trigger: AGTCAACCACCATCCGATTCACCTGCAGCGAGAGCC...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGCGATATCAAACCTCTTaGATGCAGGTCTGCCCACCG +
Preference number: 2 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMRYQTS*MQVCPP
Trigger: CGGTGGGCAGACCTGCATTCAAGAGGTTTGATATCG...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTCGGCAGTCTCGTGACTaGACTCGGGGATCCCGTCCT +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSRQSRD*TRGSRP
Trigger: AGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCG...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCCACCAGCAGCAGGCTaGGCACCGCGCCGACTGCCT +
Preference number: 2 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVPPAAG*APRRLP
Trigger: AGGCAGTCGGCGCGGTGCTCAGCCTGCTGCTGGTGG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGGCAGGTCCCTGCATATaGCCCTCCTTACAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEAGPCI*PSLQRG
Trigger: CCCTCTCTGTAAGGAGGGGCATATGCAGGGACCTGC...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGGGATGGGCAGGTCCCTaGATATGCCCCTCCTTACAG +
Preference number: 2 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEGWAGP*ICPSLQ
Trigger: CTGTAAGGAGGGGCATATGCAGGGACCTGCCCATCC...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGCAGCCACAGCTCCCATaGCCAACCTCCCATCTGGTT +
Preference number: 2 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEQPQLP*PTSHLV
Trigger: AACCAGATGGGAGGTTGGGCATGGGAGCTGTGGCTG...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCCTGTTTGGGCCTCACTaGTCATCAACGGTGTGGTCT +
Preference number: 2 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVLFGPH*SSTVWS
Trigger: AGACCACACCGTTGATGAGCAGTGAGGCCCAAACAG...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGATTCCAGAAGGAGGCTaGCGCTGTCCTCAACCACCG +
Preference number: 2 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLIPEGG*RCPQPP
Trigger: CGGTGGTTGAGGACAGCGGCAGCCTCCTTCTGGAAT...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACATATATGTGGTCTGTCTaGCATCGCTGGTGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTYMWSV*HRWWCR
Trigger: CCTGCACCACCAGCGATGGCAGACAGACCACATATA...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGACAGCAGACACGCGGCTaGTTCTGGAGGGCACGGCTC +
Preference number: 2 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERQQTRG*FWRARL
Trigger: GAGCCGTGCCCTCCAGAAGCAGCCGCGTGTCTGCTG...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGTTGGTTGGAGGTGCTTaGCTGTCCCGCGGCTCCGTG +
Preference number: 2 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLLVGGA*LSRGSV
Trigger: CACGGAGCCGCGGGACAGCCAAGCACCTCCAACCAA...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAATTGGTTGGAGGTGCTTaGCTGTCCCGCGGCTCCGTG +
Preference number: 2 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQLVGGA*LSRGSV
Trigger: CACGGAGCCGCGGGACAGCCAAGCACCTCCAACCAA...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCCTTGGGGCAAAACCCTaGGCACAAGGTACCGCCCTG +
Preference number: 2 (lower is better)
Translates to: PVWASLLINGVVSYRPPTLGAKP*AQGTAL
Trigger: CAGGGCGGTACCTTGTGCCCAGGGTTTTGCCCCAAG...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACCTAGGGCCGAGGCTCTaGCCCATGATTTTTCATGCA +
Preference number: 2 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDLGPRL*PMIFHA
Trigger: TGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAG...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGAGACAGGCAGGCAGATaGGTAACTCGCTCGGGAACG +
Preference number: 2 (lower is better)
Translates to: LINGVVSYRPPTQHAPWERQAGR*VTRSGT
Trigger: CGTTCCCGAGCGAGTTACCCATCTGCCTGCCTGTCT...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCAGCTTACCAAGGGGATaGGCAGGTCCCTGCATATGC +
Preference number: 2 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPSLPRG*AGPCIC
Trigger: GCATATGCAGGGACCTGCCCATCCCCTTGGTAAGCT...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTACCCAGCATGCTCCGTaGGAGCCTCTGGAAAACAAC +
Preference number: 2 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPTQHAP*EPLENN
Trigger: GTTGTTTTCCAGAGGCTCCCACGGAGCATGCTGGGT...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAACGAGGTTCACGGGCTTaGAGCCACCCAGCAGACACG +
Preference number: 2 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQRGSRA*SHPADT
Trigger: CGTGTCTGCTGGGTGGCTCCAAGCCCGTGAACCTCG...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp GCTGATCGTTGGGCTTCACCTGGCATATGTTGGCTCCAGAGCACGCCGGGTTTCAGCTCAGGCCGGATTTaGAGGGACAAGGGGACCCAT +
Preference number: 2 (lower is better)
Translates to: ADRWASPGICWLQSTPGFSSGRI*RDKGTH
Trigger: ATGGGTCCCCTTGTCCCTCCAAATCCGGCCTGAGCT...GAAACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTTACGAGACTCCGTTGTaGACGAGGGACCAGGACCCG +
Preference number: 2 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLYETPL*TRDQDP
Trigger: CGGGTCCTGGTCCCTCGTCCACAACGGAGTCTCGTA...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGTCACCTGGCATATGTTaGCTCCAGAGCACGCCGGGT +
Preference number: 2 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLSPGIC*LQSTPG
Trigger: ACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGA...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CAA 90 bp AGGGCTCTGTGCTCCACCCTGTCTCTAGCAACCCACCATCACTTCTaGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTTCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: RALCSTLSLATHHHF*VVTEASIPRLLSLG
Trigger: TCCCAGAGAAAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGCTAGAGACAGGGTGGAGCACAGAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CAA 90 bp CTGTCCTGGTCATCCCCATGCAGGGAGCTGAGGGCTTTCACTGACTaGGTGGTAATATGGCCGTTCTCCTGCCCTTCCTTTCCCTGCCGT +
Preference number: 2 (lower is better)
Translates to: LSWSSPCRELRAFTD*VVIWPFSCPSFPCR
Trigger: ACGGCAGGGAAAGGAAGGGCAGGAGAACGGCCATATTACCACCAAGTCAGTGAAAGCCCTCAGCTCCCTGCATGGGGATGACCAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGAGCTGCCCCATACACTaGCAGCCTCACCATCTCAAG +
Preference number: 2 (lower is better)
Translates to: LINGVVSYRPPTQHAPWESCPIH*QPHHLK
Trigger: CTTGAGATGGTGAGGCTGTCAGTGTATGGGGCAGCT...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCCGAGGCTCTGGCCCATaGTTTTTCATGCAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSRGSGP*FFMQFL
Trigger: CAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCG...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTGGCAGGAGAATCCCTTaGACCCGGGAGGCAGAGATT +
Preference number: 2 (lower is better)
Translates to: APCDPIANRGKTCVPISAGRRIP*TREAEI
Trigger: AATCTCTGCCTCCCGGGTTCAAGGGATTCTCCTGCC...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTGAGGCAGGTGGATCATaGGGTCAGGAGATCGAGACC +
Preference number: 2 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLEAGGS*GQEIET
Trigger: GGTCTCGATCTCCTGACCTCATGATCCACCTGCCTC...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTCTGAGTGGCACCAGATaGCCTCACCTGGGTTGTGAG +
Preference number: 2 (lower is better)
Translates to: APCDPIANRGKTCVPISALSGTR*PHLGCE
Trigger: CTCACAACCCAGGTGAGGTCATCTGGTGCCACTCAG...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGTGTCCCCTTCCACTCTaGCAACGGGACAGGCTTCCA +
Preference number: 2 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRCPLPL*QRDRLP
Trigger: TGGAAGCCTGTCCCGTTGTCAGAGTGGAAGGGGACA...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGGAATCGGATGGTGGTTaGCTTTTTCCGAATCCCATC +
Preference number: 2 (lower is better)
Translates to: RSLARRPAACARRRRECMESDGG*LFPNPI
Trigger: GATGGGATTCGGAAAAAGTCAACCACCATCCGATTC...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp GCTGATCGTTGGGCTTCACCTGGCATATGTTGGCTCCAGAGCACGCCGGGTTTCTCGCCCTGCTCTCTATaGTGCACTCCTCGTAGCTCT +
Preference number: 2 (lower is better)
Translates to: ADRWASPGICWLQSTPGFSPCSL*CTPRSS
Trigger: AGAGCTACGAGGAGTGCATCATAGAGAGCAGGGCGA...GAAACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGATCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTTGCCTGGCTCCGTTCTaGCAGCCCCTTGTGCATCTG +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSCLAPF*QPLVHL
Trigger: CAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCA...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGGCTCCCCTGCCCGAGTaGACTTTCACCTCTGGGATG +
Preference number: 2 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLAPLPE*TFTSGM
Trigger: CATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGC...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCATTATTTGGTTGGAGGTaGTTGGCTGTCCCGCGGCTC +
Preference number: 2 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPLFGWR*LAVPRL
Trigger: GAGCCGCGGGACAGCCAAGCACCTCCAACCAAATAA...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTCAGCATGAGGCCAAGTaGAATGCTAGGGCCGAGGCT +
Preference number: 2 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLQHEAK*NARAEA
Trigger: AGCCTCGGCCCTAGCATTGCACTTGGCCTCATGCTG...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCCTCCCTCCTCCTCCATaGTGTGACCGCCCGGCCTCC +
Preference number: 2 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLLPPPP*CDRPAS
Trigger: GGAGGCCGGGCGGTCACAGCATGGAGGAGGAGGGAG...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGCTGCAGGGCGGTTTaGTTCTCAGCAATAGAACAC +
Preference number: 2 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMCCRAV*FSAIEH
Trigger: GTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCA...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACATGCTGCAGGGCGGTTTaGTTCTCAGCAATAGAACAC +
Preference number: 2 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTCCRAV*FSAIEH
Trigger: GTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCA...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTCAGGCTGAGGGATGCTaGAGGGCGGTTTGCTTCTCA +
Preference number: 2 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLQAEGC*RAVCFS
Trigger: TGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GCTGATCGTTGGGCTTCACCTGGCATATGTTGGCTCCAGAGCACGCCGGGTTTCGCCCCCTGGGTAGAATaGCTGAGGACCAGCATCTTT +
Preference number: 2 (lower is better)
Translates to: ADRWASPGICWLQSTPGFAPWVE*LRTSIF
Trigger: AAAGATGCTGGTCCTCAGGCATTCTACCCAGGGGGC...GAAACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGATCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGGGATGGGCAGGTCCCTaGATATGCCCCTCCTTACAG +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRGWAGP*ICPSLQ
Trigger: CTGTAAGGAGGGGCATATGCAGGGACCTGCCCATCC...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCGCAGGCAGCCAGTGGTaGAGACAACATGCCTTTTTG +
Preference number: 2 (lower is better)
Translates to: LLKGIALCVSHWVGALCPAGSQW*RQHAFL
Trigger: CAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGC...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGCAGGCAGCCAGTGGTaGAGACAACATGCCTTTTTG +
Preference number: 2 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCAGSQW*RQHAFL
Trigger: CAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGC...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGCACCTGCACCACGACTaGCCGTTGACCCCATTCTCA +
Preference number: 2 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQHLHHD*PLTPFS
Trigger: TGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTG...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCCCAGCATCCCAAGGCTaGTTTCTCTGGGATGGGGCT +
Preference number: 2 (lower is better)
Translates to: PVWASLLINGVVSYRPPTPASQG*FLWDGA
Trigger: AGCCCCATCCCAGAGAAAGCAGCCTTGGGATGCTGG...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGGGGTTGGTCTTGCTGTaGCAAGGGTGCCAGAGGTGG +
Preference number: 2 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLGLVLL*QGCQRW
Trigger: CCACCTCTGGCACCCTTGGCACAGCAAGACCAACCC...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCATCTGGCAAGCCGATaGATATCGGTTGCAGCCCGG +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRHLASR*ISVAAR
Trigger: CCGGGCTGCAACCGATATGCATCGGCTTGCCAGATG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTGGTGGCTGTTCAGCCTaGCCCTGGAGCAGACGAGAT +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSGGCSA*PWSRRD
Trigger: ATCTCGTCTGCTCCAGGGGCAGGCTGAACAGCCACC...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACAGGAGAAGAAGAGAGTaGATGTCTGCTTGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDRRRRE*MSACPG
Trigger: CCCTGGACAAGCAGACATGCACTCTCTTCTTCTCCT...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTCGTAGTCCGCAGTTGTaGTACACCACAGCTTCGCCC +
Preference number: 2 (lower is better)
Translates to: APCDPIANRGKTCVPISARSPQL*YTTASP
Trigger: GGGCGAAGCTGTGGTGTAGCACAACTGCGGACTACG...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCGAAGTCTTATTTGGTTaGAGGTGCTTGGCTGTCCCG +
Preference number: 2 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVEVLFG*RCLAVP
Trigger: CGGGACAGCCAAGCACCTCCAACCAAATAAGACTTC...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAACTTGGGGCAAAACCCTaGGCACAAGGTACCGCCCTG +
Preference number: 2 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQLGAKP*AQGTAL
Trigger: CAGGGCGGTACCTTGTGCCCAGGGTTTTGCCCCAAG...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGCTTGGGGCAAAACCCTaGGCACAAGGTACCGCCCTG +
Preference number: 2 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLLGAKP*AQGTAL
Trigger: CAGGGCGGTACCTTGTGCCCAGGGTTTTGCCCCAAG...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTAGACAGGCAGGCAGATaGGTAACTCGCTCGGGAACG +
Preference number: 2 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPRQAGR*VTRSGT
Trigger: CGTTCCCGAGCGAGTTACCCATCTGCCTGCCTGTCT...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTAGACAGGCAGGCAGATaGGTAACTCGCTCGGGAACG +
Preference number: 2 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLRQAGR*VTRSGT
Trigger: CGTTCCCGAGCGAGTTACCCATCTGCCTGCCTGTCT...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGGAGGTGGGAATGGCCTaGAGAACAGCCCCCTGGGTA +
Preference number: 2 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLEVGMA*RTAPWV
Trigger: TACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTC...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGACCCAGCATGCTCCGTaGGAGCCTCTGGAAAACAAC +
Preference number: 2 (lower is better)
Translates to: LINGVVSYRPPTQHAPWETQHAP*EPLENN
Trigger: GTTGTTTTCCAGAGGCTCCCACGGAGCATGCTGGGT...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTCCGGGCAGGCATAGCTaGTGTACCACCGGAAGTTGT +
Preference number: 2 (lower is better)
Translates to: APCDPIANRGKTCVPISAPGRHS*CTTGSC
Trigger: ACAACTTCCGGTGGTACACCAGCTATGCCTGCCCGG...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACCGAGATGGATCCTCGTaGTATATGTGGTCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDRDGSS*YMWSVC
Trigger: GCAGACAGACCACATATACCACGAGGATCCATCTCG...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTTCCGACTGGCCTTGCTaGCTTCCAATTCTTGAGCTC +
Preference number: 2 (lower is better)
Translates to: QREPRRQSEASQLSTATASDWPC*LPILEL
Trigger: GAGCTCAAGAATTGGAAGCCAGCAAGGCCAGTCGGA...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTGCTCGTTGCTCTTCATaGGACAGGCTGTGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLARCSS*DRLWLW
Trigger: CCACAGCCACAGCCTGTCCCATGAAGAGCAACGAGC...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGCTCGTTGCTCTTCATaGGACAGGCTGTGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQARCSS*DRLWLW
Trigger: CCACAGCCACAGCCTGTCCCATGAAGAGCAACGAGC...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAACCAGCTGCAGGACCTaGTCCACGTATCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTTSCRT*STYLSL
Trigger: GAGGCTGAGATACGTGGACCAGGTCCTGCAGCTGGT...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTCATGGGCCTATTGGTTaGCCTGGCCTCAGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPHGPIG*PGLRPA
Trigger: TGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCATG...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGGGAAGGAGTGGGGCCTaGCCTCCTTCACCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVGRSGA*PPSPSP
Trigger: GGGAGAGGGTGAAGGAGGTCAGGCCCCACTCCTTCC...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGGCCCTGTGGCCGATCTaGGCCATGCCTTATTCCAAT +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRALWPI*AMPYSN
Trigger: ATTGGAATAAGGCATGGCTCAGATCGGCCACAGGGC...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGAGCTGCCCCATACACTaGCAGCCTCACCATCTCAAG +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRSCPIH*QPHHLK
Trigger: CTTGAGATGGTGAGGCTGTCAGTGTATGGGGCAGCT...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTTTGGGCAGGTTGTTTaGATTCACCAGCCGGCAAAA +
Preference number: 2 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMFGQVV*IHQPAK
Trigger: TTTTGCCGGCTGGTGAATTCAAACAACCTGCCCAAA...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCTTTGGGCAGGTTGTTTaGATTCACCAGCCGGCAAAA +
Preference number: 2 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSFGQVV*IHQPAK
Trigger: TTTTGCCGGCTGGTGAATTCAAACAACCTGCCCAAA...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTCGAGGCTCTGGCCCATaGTTTTTCATGCAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: QREPRRQSEASQLSTATARGSGP*FFMQFL
Trigger: CAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCG...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGCATACAACCTCCTGGTaGCACACACACTGGCTCCTT +
Preference number: 2 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEHTTSW*HTHWLL
Trigger: AAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTATG...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTATGAGTGTACCTCCCTaGGCCATGGGATTCTTCAGA +
Preference number: 2 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPMSVPP*AMGFFR
Trigger: TCTGAAGAATCCCATGGCTCAGGGAGGTACACTCAT...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTACCACGACTGCCCGTTaGCCCCATTCTCACAGAACA +
Preference number: 2 (lower is better)
Translates to: APCDPIANRGKTCVPISATTTAR*PHSHRT
Trigger: TGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGT...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTCTCCCATCTGGTTGCTaGAGCGTCTCCATCTCTTTA +
Preference number: 2 (lower is better)
Translates to: QREPRRQSEASQLSTATALPSGC*SVSISL
Trigger: TAAAGAGATGGAGACGCTTCAGCAACCAGATGGGAG...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGGGCAGGAGAATCCCTTaGACCCGGGAGGCAGAGATT +
Preference number: 2 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLGRRIP*TREAEI
Trigger: AATCTCTGCCTCCCGGGTTCAAGGGATTCTCCTGCC...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCCATTCTGGCAGGTGTaGGGCAACGTCTCACTGTGT +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRPFWQV*GNVSLC
Trigger: ACACAGTGAGACGTTGCCTCACACCTGCCAGAATGG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACACCACACACTCCCAGTTaGGAGAAAAGATGGGGTGGC +
Preference number: 2 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTPHTPS*EKRWGG
Trigger: GCCACCCCATCTTTTCTCTCAACTGGGAGTGTGTGG...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGGTATCCGTCGTTGTCTaGATGGGACAGGCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRVSVVV*MGQAAS
Trigger: AGAGGCTGCCTGTCCCATTCAGACAACGACGGATAC...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAAGACCTGCCACTTTGTaGAATCCCTGCGGTTCCCGC +
Preference number: 2 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQRPATL*NPCGSR
Trigger: GCGGGAACCGCAGGGATTTCACAAAGTGGCAGGTCT...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTACCCACGCACTTCACTaGAGACTTGTGGCCTCCCAA +
Preference number: 2 (lower is better)
Translates to: APCDPIANRGKTCVPISATHALH*RLVASQ
Trigger: TTGGGAGGCCACAAGTCTTCAGTGAAGTGCGTGGGT...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGGCTGAGGGCTTTCACTaGCTTGGTGGTAATATGGCC +
Preference number: 2 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLAEGFH*LGGNMA
Trigger: GGCCATATTACCACCAAGTCAGTGAAAGCCCTCAGC...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGATGTCCCGCGGCTCCGTaGTCCCCTGCAGGCACTGCG +
Preference number: 2 (lower is better)
Translates to: FDIPVWASLLINGVVSYRCPAAP*SPAGTA
Trigger: CGCAGTGCCTGCAGGGGAGCACGGAGCCGCGGGACA...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGGGTACATCACACCCCTaGTGGCAGGAAGAAACGGTG +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRGTSHP*WQEETV
Trigger: CACCGTTTCTTCCTGCCAGCAGGGGTGTGATGTACC...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAACAGCATGAGGCCAAGTaGAATGCTAGGGCCGAGGCT +
Preference number: 2 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQQHEAK*NARAEA
Trigger: AGCCTCGGCCCTAGCATTGCACTTGGCCTCATGCTG...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGTGGCAGGAAAGGCGCTaGCGCCAGAATAAGAACACC +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRWQERR*RQNKNT
Trigger: GGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCA...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAACAGGCTGAGGGATGCTaGAGGGCGGTTTGCTTCTCA +
Preference number: 2 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQQAEGC*RAVCFS
Trigger: TGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTGTACAGGCTGAGGGATaGTGCAGGGCGGTTTGCTTC +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSVQAEG*CRAVCF
Trigger: GAAGCAAACCGCCCTGCAGCATCCCTCAGCCTGTAC...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGACTGGAGTAACTTCCTaGTTCCATGCAGGTAGCTCT +
Preference number: 2 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMTGVTS*FHAGSS
Trigger: AGAGCTACCTGCATGGAAGCAGGAAGTTACTCCAGT...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAGCCCCCTGGGTAGAATaGCTGAGGACCAGCATCTTT +
Preference number: 2 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTAPWVE*LRTSIF
Trigger: AAAGATGCTGGTCCTCAGGCATTCTACCCAGGGGGC...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTCAGCCACAGCTCCCATaGCCAACCTCCCATCTGGTT +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSQPQLP*PTSHLV
Trigger: AACCAGATGGGAGGTTGGGCATGGGAGCTGTGGCTG...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGCTGTTTGGGCCTCACTaGTCATCAACGGTGTGGTCT +
Preference number: 2 (lower is better)
Translates to: LINGVVSYRPPTQHAPWELFGPH*SSTVWS
Trigger: AGACCACACCGTTGATGAGCAGTGAGGCCCAAACAG...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTAGTCATCATGCTCGTTaGTCTTCATGGGACAGGCTG +
Preference number: 2 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCSHHAR*SSWDRL
Trigger: CAGCCTGTCCCATGAAGAGCAACGAGCATGATGACT...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTCAGTTGTGGTCCTTCTaGAAATGCTGGCCCTTTCAG +
Preference number: 2 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCQLWSF*KCWPFQ
Trigger: CTGAAAGGGCCAGCATTTGCAGAAGGACCACAACTG...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCTAGGGCCGAGGCTCTaGCCCATGATTTTTCATGCA +
Preference number: 2 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLLGPRL*PMIFHA
Trigger: TGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAG...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGAGCTTACCAAGGGGATaGGCAGGTCCCTGCATATGC +
Preference number: 2 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRSLPRG*AGPCIC
Trigger: GCATATGCAGGGACCTGCCCATCCCCTTGGTAAGCT...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTAGCTTACCAAGGGGATaGGCAGGTCCCTGCATATGC +
Preference number: 2 (lower is better)
Translates to: APCDPIANRGKTCVPISASLPRG*AGPCIC
Trigger: GCATATGCAGGGACCTGCCCATCCCCTTGGTAAGCT...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCTTAGCAGGCAGCCAGTaGTGCAGACAACATGCCTTT +
Preference number: 2 (lower is better)
Translates to: LLKGIALCVSHWVGALCPLAGSQ*CRQHAF
Trigger: AAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAA...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCTACCTCCCTGAGCCATaGGATTCTTCAGAGTCAGTA +
Preference number: 2 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVYLPEP*DSSESV
Trigger: TACTGACTCTGAAGAATCCCATGGCTCAGGGAGGTA...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTGCCCAACCTCCCATCTaGTTGCTGAAGCGTCTCCAT +
Preference number: 2 (lower is better)
Translates to: APCDPIANRGKTCVPISAAQPPI*LLKRLH
Trigger: ATGGAGACGCTTCAGCAACCAGATGGGAGGTTGGGC...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCAGATGACCTCACCTaGGTTGTGAGCCCCTCATTT +
Preference number: 2 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLPDDLT*VVSPSF
Trigger: AAATGAGGGGCTCACAACCCAGGTGAGGTCATCTGG...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTCCCACCATCACTTCTTaGTTGTCACCGAGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPPTITS*LSPRPA
Trigger: TGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGG...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCCCCTGAGTTGTCCATaGCATACCAGTTTCCTCCAA +
Preference number: 2 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPPLSCP*HTSFLQ
Trigger: TTGGAGGAAACTGGTATGCCATGGACAACTCAGGGG...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp CATGAGGAGACCACCTTGGACTTGTCACTTGTGGGGCAGACGTCTGAGGAAAGCTGTTCAGCCTGCCCCTaGAGCAGACGAGATGGATCC +
Preference number: 2 (lower is better)
Translates to: HEETTLDLSLVGQTSEESCSACP*SRRDGS
Trigger: GGATCCATCTCGTCTGCTCCAGGGGCAGGCTGAACA...GCTTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGCCGTCGTTGTCTGAATaGGACAGGCAGCCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRPSLSE*DRQPLC
Trigger: ACACAGAGGCTGCCTGTCCCATTCAGACAACGACGG...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGTGGATTGAGTATTGGTaGTCCTGCTACCCGGCCGAT +
Preference number: 2 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEWIEYW*SCYPAD
Trigger: ATCGGCCGGGTAGCAGGACCACCAATACTCAATCCA...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGGCCGTCATCGGTTTCTaGAGGGCAACGATCACCATT +
Preference number: 2 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLAVIGF*RATITI
Trigger: AATGGTGATCGTTGCCCTCCAGAAACCGATGACGGC...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTGGTAGTTGTCCCCATTaGTCCTCATGTCCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLGSCPH*SSCPQR
Trigger: CCTCTGGGGACATGAGGACCAATGGGGACAACTACC...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGTCACCTGGCATATGTTaGCTCCAGAGCACGCCGGGT +
Preference number: 2 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLSPGIC*LQSTPG
Trigger: ACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGA...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CAA 90 bp ACAGCGACATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTaGCCATCCAGCTTACCAAGGGGATGGGCAGGTCCCTGCATATGC +
Preference number: 2 (lower is better)
Translates to: TATLAGSQWCRQHAF*PSSLPRGWAGPCIC
Trigger: GCATATGCAGGGACCTGCCCATCCCCTTGGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAATGTCGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CAA 90 bp CTCACGATGGTGTCGTTGAGGCCCAGGGGCTTCAGGTCATACAAGTaGCCATGCCTTGGGTCTTTCACCTCACAGTTGTCCCCTTCCACT +
Preference number: 2 (lower is better)
Translates to: LTMVSLRPRGFRSYK*PCLGSFTSQLSPST
Trigger: AGTGGAAGGGGACAACTGTGAGGTGAAAGACCCAAGGCATGGCAACTTGTATGACCTGAAGCCCCTGGGCCTCAACGACACCATCGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CAA 90 bp GTTCCCGCTTTTCCTGACATGAGGAGACCACCTTGGACTTGTCACTaGTGGGGCAGACGTCTGAGGAAAGCTTCCCACAGACCCGGAAGT +
Preference number: 2 (lower is better)
Translates to: VPAFPDMRRPPWTCH*WGRRLRKASHRPGS
Trigger: ACTTCCGGGTCTGTGGGAAGCTTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATGTCAGGAAAAGCGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CAA 90 bp AAGAGAGTGCATGTCTGCTTGTCCAGGGAGATGAGCATGGGCCTATaGGTTGGCCTGGCCTCAGGCCTGCACACGAAACTGATCACACTC +
Preference number: 2 (lower is better)
Translates to: KRVHVCLSREMSMGL*VGLASGLHTKLITL
Trigger: GAGTGTGATCAGTTTCGTGTGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCATGCTCATCTCCCTGGACAAGCAGACATGCACTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CAA 90 bp GGCTCCAGAGCACGCCGGGTTTCTGGAGCTTGTGATGGAGGAAAGTaGGATCTCATACAGGTAGTTGTCCCCATTGGTCCTCATGTCCCC +
Preference number: 2 (lower is better)
Translates to: GSRARRVSGACDGGK*DLIQVVVPIGPHVP
Trigger: GGGGACATGAGGACCAATGGGGACAACTACCTGTATGAGATCCAACTTTCCTCCATCACAAGCTCCAGAAACCCGGCGTGCTCTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTTTTGGGCAGGTTGTTTaGATTCACCAGCCGGCAAAA +
Preference number: 2 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPFGQVV*IHQPAK
Trigger: TTTTGCCGGCTGGTGAATTCAAACAACCTGCCCAAA...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACAGGTATCATGAGAACCTaGAGAGATGAGACCTATACC +
Preference number: 2 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTGIMRT*RDETYT
Trigger: GGTATAGGTCTCATCTCTTCAGGTTCTCATGATACC...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCAACAATGTCCAGAACTaGCAGCAAGTATGGCTCAAG +
Preference number: 2 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVNNVQN*QQVWLK
Trigger: CTTGAGCCATACTTGCTGTCAGTTCTGGACATTGTT...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCACCTCACCTGGGTTGTaGGCCCCTCATTTTCACTCT +
Preference number: 2 (lower is better)
Translates to: PVWASLLINGVVSYRPPTTSPGL*APHFHS
Trigger: AGAGTGAAAATGAGGGGCTCACAACCCAGGTGAGGT...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACATCACGATGGTGTCGTTaGGGCCCAGGGGCTTCAGGT +
Preference number: 2 (lower is better)
Translates to: PEVEEVEEGADASGVTFTSRWCR*GPGASG
Trigger: ACCTGAAGCCCCTGGGCCTCAACGACACCATCGTGA...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCGGTCCCCCGTCCCAGTaGTGGCTTCCCAGTTGTCAC +
Preference number: 2 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLGPPSQ*WLPSCH
Trigger: GTGACAACTGGGAAGCCATCACTGGGACGGGGGACC...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTTGTCCGGTAGCTGTTTaGGTGTCTGCAGAAGCCCCA +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSCPVAV*VSAEAP
Trigger: TGGGGCTTCTGCAGACACTCAAACAGCTACCGGACA...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCAACTTTGTCACCTATaGCACCCAGCTTCTGCGTGT +
Preference number: 2 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLQLCHL*HPASAC
Trigger: ACACGCAGAAGCTGGGTGTCATAGGTGACAAAGTTG...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCGATATCAAACCTCTTaGATGCAGGTCTGCCCACCG +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRRYQTS*MQVCPP
Trigger: CGGTGGGCAGACCTGCATTCAAGAGGTTTGATATCG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACATGCCTGGCTCCGTTCTaGCAGCCCCTTGTGCATCTG +
Preference number: 2 (lower is better)
Translates to: PEVEEVEEGADASGVTFTCLAPF*QPLVHL
Trigger: CAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCA...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCCCTCTGTTTTGAGATaGGTCCGGCCTTATGCTTTT +
Preference number: 2 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPPSVLR*VRPYAF
Trigger: AAAAGCATAAGGCCGGACGCATCTCAAAACAGAGGG...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp CATGAGGAGACCACCTTGGACTTGTCACTTGTGGGGCAGACGTCTGAGGAAAGCTGGCAGGAAAGGCGCTaGCGCCAGAATAAGAACACC +
Preference number: 2 (lower is better)
Translates to: HEETTLDLSLVGQTSEESWQERR*RQNKNT
Trigger: GGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCA...GCTTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAATGGCAGGAAAGGCGCTaGCGCCAGAATAAGAACACC +
Preference number: 2 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQWQERR*RQNKNT
Trigger: GGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCA...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTGCAATGAACAGGGGCTaGAGAGATCTCTTCAAGGTA +
Preference number: 2 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPAMNRG*RDLFKV
Trigger: TACCTTGAAGAGATCTCTGCAGCCCCTGTTCATTGC...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTAAGGGCATTGCTCTGTaGGTTTCTCACTGGGTGGGA +
Preference number: 2 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLKGIAL*VSHWVG
Trigger: TCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTT...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTTCAAGATGGACAAACTaGTACATCACACCCCTGCTG +
Preference number: 2 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPSRWTN*YITPLL
Trigger: CAGCAGGGGTGTGATGTACCAGTTTGTCCATCTTGA...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGATCAAGATGGACAAACTaGTACATCACACCCCTGCTG +
Preference number: 2 (lower is better)
Translates to: EHSVACSQASGVCQEKKRSRWTN*YITPLL
Trigger: CAGCAGGGGTGTGATGTACCAGTTTGTCCATCTTGA...TCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAACCACACCCCGAGGTTaGCCTGGAGAAGGTAAAGAA +
Preference number: 2 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTTTPRG*PGEGKE
Trigger: TTCTTTACCTTCTCCAGGCCAACCTCGGGGTGTGGT...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCTGGATTTCCTTGGTGTaGGGTTTGCCTATTCCATCT +
Preference number: 2 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVWISLV*GLPIPS
Trigger: AGATGGAATAGGCAAACCCCACACCAAGGAAATCCA...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTTACCTCCCTGAGCCATaGGATTCTTCAGAGTCAGTA +
Preference number: 2 (lower is better)
Translates to: QREPRRQSEASQLSTATAYLPEP*DSSESV
Trigger: TACTGACTCTGAAGAATCCCATGGCTCAGGGAGGTA...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCGTCCCCAACTCAATGTaGCTATCTTGCCGCCTTGCA +
Preference number: 2 (lower is better)
Translates to: PVWASLLINGVVSYRPPTVPNSM*LSCRLA
Trigger: TGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGAC...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTGTCCCCAACTCAATGTaGCTATCTTGCCGCCTTGCA +
Preference number: 2 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPVPNSM*LSCRLA
Trigger: TGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGAC...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTACAGGCTCCAAGTTCTaGGCTTGCTTCTGCCTTACC +
Preference number: 2 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPTGSKF*ACFCLT
Trigger: GGTAAGGCAGAAGCAAGCCCAGAACTTGGAGCCTGT...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTGCCCAACCTCCCATCTaGTTGCTGAAGCGTCTCCAT +
Preference number: 2 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPAQPPI*LLKRLH
Trigger: ATGGAGACGCTTCAGCAACCAGATGGGAGGTTGGGC...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGAAAATTAGCCGGGCGTaGCAGTGCGTGCCTTTAATC +
Preference number: 2 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLKISRA*QCVPLI
Trigger: GATTAAAGGCACGCACTGCCACGCCCGGCTAATTTT...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTCCAGATGACCTCACCTaGGTTGTGAGCCCCTCATTT +
Preference number: 2 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPPDDLT*VVSPSF
Trigger: AAATGAGGGGCTCACAACCCAGGTGAGGTCATCTGG...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACACCTAAAGCCGCTGGGTaGGGCAGGGCAAATCAGGCA +
Preference number: 2 (lower is better)
Translates to: PEVEEVEEGADASGVTFTPKAAG*GRANQA
Trigger: TGCCTGATTTGCCCTGCCCCACCCAGCGGCTTTAGG...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGAAGGGAATTTCCCAGTaGATGGTCACAGGCCACCAG +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRKGISQ*MVTGHQ
Trigger: CTGGTGGCCTGTGACCATCCACTGGGAAATTCCCTT...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GCTGATCGTTGGGCTTCACCTGGCATATGTTGGCTCCAGAGCACGCCGGGTTTCCTGGAGCAGACGAGATaGATCCTCGTGGTATATGTG +
Preference number: 2 (lower is better)
Translates to: ADRWASPGICWLQSTPGFLEQTR*ILVVYV
Trigger: CACATATACCACGAGGATCCATCTCGTCTGCTCCAG...GAAACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGATCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTCAAGTTGCCATGCCTTaGGTCTTTCACCTCACAGTT +
Preference number: 2 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCQVAMP*VFHLTV
Trigger: AACTGTGAGGTGAAAGACCCAAGGCATGGCAACTTG...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACATACGAGACTCCGTTGTaGACGAGGGACCAGGACCCG +
Preference number: 2 (lower is better)
Translates to: PEVEEVEEGADASGVTFTYETPL*TRDQDP
Trigger: CGGGTCCTGGTCCCTCGTCCACAACGGAGTCTCGTA...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CAA 90 bp AACGTGATCCTGGTGGAGAAGCGCTGGTTCCCACACTTGTCACCGTaGACATACATGATGCTCAAAGATCCATTCGCCGCGGCTTGGGGA +
Preference number: 2 (lower is better)
Translates to: NVILVEKRWFPHLSP*TYMMLKDPFAAAWG
Trigger: TCCCCAAGCCGCGGCGAATGGATCTTTGAGCATCATGTATGTCAACGGTGACAAGTGTGGGAACCAGCGCTTCTCCACCAGGATCACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCGGAAGGAGTGGGGCCTaGCCTCCTTCACCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTGRSGA*PPSPSP
Trigger: GGGAGAGGGTGAAGGAGGTCAGGCCCCACTCCTTCC...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGAGCCGGCAAAAATACTaGCAAATGTGCTCTGTACGC +
Preference number: 2 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLSRQKY*QMCSVR
Trigger: GCGTACAGAGCACATTTGTCAGTATTTTTGCCGGCT...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp CACAGCCAGAAGCAGGTTTTCCCAGGATGGTCCCACAGACAGGCATTGTGCCGCTTTGGGCAGGTTGTTTaGATTCACCAGCCGGCAAAA +
Preference number: 2 (lower is better)
Translates to: HSQKQVFPGWSHRQALCRFGQVV*IHQPAK
Trigger: TTTTGCCGGCTGGTGAATTCAAACAACCTGCCCAAA...GCGGCACAATGCCTGTCTGTGGGACCATCCTGGGAAAACCTGCTTCTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTGAGAACCTGAAGAGATaGGACCTATACCCCAAATCT +
Preference number: 2 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPENLKR*DLYPKS
Trigger: AGATTTGGGGTATAGGTCTCATCTCTTCAGGTTCTC...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGGTATCATGAGAACCTaGAGAGATGAGACCTATACC +
Preference number: 2 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCGIMRT*RDETYT
Trigger: GGTATAGGTCTCATCTCTTCAGGTTCTCATGATACC...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACGACTCTGGAGAAAAATaGAAGTGCTGCCTCATAAAG +
Preference number: 2 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDDSGEK*KCCLIK
Trigger: CTTTATGAGGCAGCACTTTCATTTTTCTCCAGAGTC...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCAAAAGAGTCCAATTCTaGTTTGCTGTCACGGGATGT +
Preference number: 2 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVKRVQF*FAVTGC
Trigger: ACATCCCGTGACAGCAAATCAGAATTGGACTCTTTT...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACCTATATGTTCCTTCCTaGGGAATCATCTCGTGTTAC +
Preference number: 2 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDLYVPS*GIISCY
Trigger: GTAACACGAGATGATTCCTCAGGAAGGAACATATAG...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGCATACAACCTCCTGGTaGCACACACACTGGCTCCTT +
Preference number: 2 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLHTTSW*HTHWLL
Trigger: AAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTATG...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCGAGGCAGGTGGATCATaGGGTCAGGAGATCGAGACC +
Preference number: 2 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTEAGGS*GQEIET
Trigger: GGTCTCGATCTCCTGACCTCATGATCCACCTGCCTC...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCTCACTCTCCCAGGTGTaGCAACCAATAACCCCATTC +
Preference number: 2 (lower is better)
Translates to: PVWASLLINGVVSYRPPTSLSQV*QPITPF
Trigger: GAATGGGGTTATTGGTTGTCACACCTGGGAGAGTGA...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGAACCTTTGGAGTACGTaGCAACAACTTTGTCACCTA +
Preference number: 2 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMNLWST*QQLCHL
Trigger: TAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTT...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATTGTCCCGCGGCTCCGTaGTCCCCTGCAGGCACTGCG +
Preference number: 2 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNCPAAP*SPAGTA
Trigger: CGCAGTGCCTGCAGGGGAGCACGGAGCCGCGGGACA...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GTCACCTATGACACCCAGCTTCTGCGTGTGAACGAGTCCCAGGACCTGGACGTCGGCCGATCTGAGCCATaGCTTATTCCAATGACTGTA +
Preference number: 2 (lower is better)
Translates to: VTYDTQLLRVNESQDLDVGRSEP*LIPMTV
Trigger: TACAGTCATTGGAATAAGGCATGGCTCAGATCGGCC...GACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGGTGTCATAGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTGCAGGCAGCCAGTGGTaGAGACAACATGCCTTTTTG +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSAGSQW*RQHAFL
Trigger: CAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGC...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTTTCTGGGCTTGCTTCTaGCTTACCTATCCAACACCC +
Preference number: 2 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLFWACF*LTYPTP
Trigger: GGGTGTTGGATAGGTAAGGCAGAAGCAAGCCCAGAA...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACACCGGGAGGCAGAGATTaGAGTGAGCCGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: PEVEEVEEGADASGVTFTPGGRD*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAATCTCTGCCTCCCGG...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGGGGTTGGTCTTGCTGTaGCAAGGGTGCCAGAGGTGG +
Preference number: 2 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVGLVLL*QGCQRW
Trigger: CCACCTCTGGCACCCTTGGCACAGCAAGACCAACCC...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCCATTGTTATAGGGTGTaGCGCCTCTGTAGTTCAGTT +
Preference number: 2 (lower is better)
Translates to: LLKGIALCVSHWVGALCPHCYRV*RLCSSV
Trigger: AACTGAACTACAGAGGCGGCACACCCTATAACAATG...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCATTCTCCCCACAGATaGTCATGTAAACCAACCCCT +
Preference number: 2 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLHSPHR*SCKPTP
Trigger: AGGGGTTGGTTTACATGAGCATCTGTGGGGAGAATG...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCGAACATTCGGTCGCTTaGTCGCAGGCCAGCGGCGTG +
Preference number: 2 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALEHSVA*SQASGV
Trigger: CACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGTCCAGTTTCATTGATTaGAGCCGTCCAAAGGATGCC +
Preference number: 2 (lower is better)
Translates to: LINGVVSYRPPTQHAPWESSFID*SRPKDA
Trigger: GGCATCCTTTGGACGGCTGCAATCAATGAAACTGGA...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGATCAAACCTCTTGAATaGAGGTCTGCCCACCGTCTT +
Preference number: 2 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEIKPLE*RSAHRL
Trigger: AAGACGGTGGGCAGACCTGCATTCAAGAGGTTTGAT...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTAGTGGAAGTCTTATTTaGTTGGAGGTGCTTGGCTGT +
Preference number: 2 (lower is better)
Translates to: QREPRRQSEASQLSTATASGSLI*LEVLGC
Trigger: ACAGCCAAGCACCTCCAACCAAATAAGACTTCCACT...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGAACAATCAGGAAGGAGTaGGGCCTGACCTCCTTCACC +
Preference number: 2 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERTIRKE*GLTSFT
Trigger: GGTGAAGGAGGTCAGGCCCCACTCCTTCCTGATTGT...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAACTAGGGCCGAGGCTCTaGCCCATGATTTTTCATGCA +
Preference number: 2 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQLGPRL*PMIFHA
Trigger: TGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAG...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTACCACACCCCGAGGTTaGCCTGGAGAAGGTAAAGAA +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSTTPRG*PGEGKE
Trigger: TTCTTTACCTTCTCCAGGCCAACCTCGGGGTGTGGT...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACGAGGTGGGAATGGCCTaGAGAACAGCCCCCTGGGTA +
Preference number: 2 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDEVGMA*RTAPWV
Trigger: TACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTC...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGCACTGTGGATTTCCTTaGTGTGGGGTTTGCCTATTC +
Preference number: 2 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEHCGFP*CGVCLF
Trigger: GAATAGGCAAACCCCACACCAAGGAAATCCACAGTG...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTATTTCCACTTCACTGTaGATTTCCTTGGTGTGGGGT +
Preference number: 2 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCISTSL*ISLVWG
Trigger: ACCCCACACCAAGGAAATCCACAGTGAAGTGGAAAT...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGGTCCCCAACTCAATGTaGCTATCTTGCCGCCTTGCA +
Preference number: 2 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLVPNSM*LSCRLA
Trigger: TGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGAC...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCCTAAAGCCGCTGGGTaGGGCAGGGCAAATCAGGCA +
Preference number: 2 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVPKAAG*GRANQA
Trigger: TGCCTGATTTGCCCTGCCCCACCCAGCGGCTTTAGG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTTGCTCATCAACGGTGTaGTCTCATACAGACCACCCA +
Preference number: 2 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLCSSTV*SHTDHP
Trigger: TGGGTGGTCTGTATGAGACCACACCGTTGATGAGCA...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACCATTCTCACCAAAGGTaGACAAGTGTTCGCTTTTCT +
Preference number: 2 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDHSHQR*TSVRFS
Trigger: AGAAAAGCGAACACTTGTCCACCTTTGGTGAGAATG...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGCATTCTCACCAAAGGTaGACAAGTGTTCGCTTTTCT +
Preference number: 2 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMHSHQR*TSVRFS
Trigger: AGAAAAGCGAACACTTGTCCACCTTTGGTGAGAATG...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGACGGCAGCAGGAACACTaGGACCCAAATCTCCTCTTG +
Preference number: 2 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERRQQEH*DPNLLL
Trigger: CAAGAGGAGATTTGGGTCCCAGTGTTCCTGCTGCCG...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCCAGGTGTCCTGTGCTTaGGTTGGTGACCTGGCAGTC +
Preference number: 2 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTQVSCA*VGDLAV
Trigger: GACTGCCAGGTCACCAACCCAAGCACAGGACACCTG...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACGCCTATTGGTTGGCCTaGCCTCAGGCCTGCACACGA +
Preference number: 2 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDAYWLA*PQACTR
Trigger: TCGTGTGCAGGCCTGAGGCCAGGCCAACCAATAGGC...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCATGGGCCTATTGGTTaGCCTGGCCTCAGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVHGPIG*PGLRPA
Trigger: TGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCATG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACTTCTCCTACAGCAAGTaGTCAGCTTACTTATCACTG +
Preference number: 2 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDFSYSK*SAYLSL
Trigger: CAGTGATAAGTAAGCTGACCACTTGCTGTAGGAGAA...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTCTTTCACCTCTGGGATaGTCAGAACCTCATCCTCAC +
Preference number: 2 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPLSPLG*SEPHPH
Trigger: GTGAGGATGAGGTTCTGACCATCCCAGAGGTGAAAG...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACACTGTACGCCCAGGCTTaGAGATATCATGCAAAAAGG +
Preference number: 2 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTLYAQA*RYHAKR
Trigger: CCTTTTTGCATGATATCTTCAAGCCTGGGCGTACAG...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAAGCCGGCAAAAATACTaGCAAATGTGCTCTGTACGC +
Preference number: 2 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTSRQKY*QMCSVR
Trigger: GCGTACAGAGCACATTTGTCAGTATTTTTGCCGGCT...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACAAAATTCATTTTCTCTaGCACCTCAACTCCACTCAC +
Preference number: 2 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDKIHFL*HLNSTH
Trigger: GTGAGTGGAGTTGAGGTGTCAGAGAAAATGAATTTT...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTAAAAGAGTCCAATTCTaGTTTGCTGTCACGGGATGT +
Preference number: 2 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCKRVQF*FAVTGC
Trigger: ACATCCCGTGACAGCAAATCAGAATTGGACTCTTTT...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTTCAAACTCCTTACTGTaGCAGTCACAACAGGCTCCA +
Preference number: 2 (lower is better)
Translates to: APCDPIANRGKTCVPISASNSLL*QSQQAP
Trigger: TGGAGCCTGTTGTGACTGTCACAGTAAGGAGTTTGA...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGCTCCCATCTGGTTGCTaGAGCGTCTCCATCTCTTTA +
Preference number: 2 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLLPSGC*SVSISL
Trigger: TAAAGAGATGGAGACGCTTCAGCAACCAGATGGGAG...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTCTCCCATCTGGTTGCTaGAGCGTCTCCATCTCTTTA +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSLPSGC*SVSISL
Trigger: TAAAGAGATGGAGACGCTTCAGCAACCAGATGGGAG...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGTTCATGTTGCATAGCTaGACCTCTGCACCCTTTCAC +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRFMLHS*TSAPFH
Trigger: GTGAAAGGGTGCAGAGGTTCAGCTATGCAACATGAA...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCAGTATTTCCTCCACGTaGCATGTTCCCCTGAGTTGT +
Preference number: 2 (lower is better)
Translates to: PVWASLLINGVVSYRPPTSISST*HVPLSC
Trigger: ACAACTCAGGGGAACATGTCACGTGGAGGAAATACT...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp GTCACCTATGACACCCAGCTTCTGCGTGTGAACGAGTCCCAGGACCTGGACGTCTGGAAACCACTTCAGTaGAGGAGCCCTGATCTTTTT +
Preference number: 2 (lower is better)
Translates to: VTYDTQLLRVNESQDLDVWKPLQ*RSPDLF
Trigger: AAAAAGATCAGGGCTCCTTCACTGAAGTGGTTTCCA...GACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGGTGTCATAGGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGCTGGCTTCCAATTCTTaGGCTCTTCAGTTTGGGTTT +
Preference number: 2 (lower is better)
Translates to: LINGVVSYRPPTQHAPWELASNS*ALQFGF
Trigger: AAACCCAAACTGAAGAGCTCAAGAATTGGAAGCCAG...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTGAATCGGATGGTGGTTaGCTTTTTCCGAATCCCATC +
Preference number: 2 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPESDGG*LFPNPI
Trigger: GATGGGATTCGGAAAAAGTCAACCACCATCCGATTC...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGGCCTGCACACGAAACTaGTCACACTCTTATAGCTCA +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRACTRN*SHSYSS
Trigger: TGAGCTATAAGAGTGTGATCAGTTTCGTGTGCAGGC...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCATTTGCTATTGGATTaGGTATTGGTGGTCCTGCTA +
Preference number: 2 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPHLLLD*VLVVLL
Trigger: TAGCAGGACCACCAATACTCAATCCAATAGCAAATG...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAGGCCGATCTGAGCCATaGCTTATTCCAATGACTGTA +
Preference number: 2 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTGRSEP*LIPMTV
Trigger: TACAGTCATTGGAATAAGGCATGGCTCAGATCGGCC...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTCCCTCTGTTTTGAGATaGGTCCGGCCTTATGCTTTT +
Preference number: 2 (lower is better)
Translates to: APCDPIANRGKTCVPISAPSVLR*VRPYAF
Trigger: AAAAGCATAAGGCCGGACGCATCTCAAAACAGAGGG...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGGGATGGGCAGGTCCCTaGATATGCCCCTCCTTACAG +
Preference number: 2 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVGWAGP*ICPSLQ
Trigger: CTGTAAGGAGGGGCATATGCAGGGACCTGCCCATCC...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCAAGAGTCAAAGCAAATaGACTCAAACGTGTTGTCAC +
Preference number: 2 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVKSQSK*TQTCCH
Trigger: GTGACAACACGTTTGAGTGCATTTGCTTTGACTCTT...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTTCATCTAGACTATCTTaGTCAAAAGCCCAATCTGGC +
Preference number: 2 (lower is better)
Translates to: QREPRRQSEASQLSTATASSRLS*SKAQSG
Trigger: GCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGA...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTTCATCTAGACTATCTTaGTCAAAAGCCCAATCTGGC +
Preference number: 2 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPSSRLS*SKAQSG
Trigger: GCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGA...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCCAGCATCCCAAGGCTaGTTTCTCTGGGATGGGGCT +
Preference number: 2 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVPASQG*FLWDGA
Trigger: AGCCCCATCCCAGAGAAAGCAGCCTTGGGATGCTGG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCAGATTCCAGCTATTaGCTTCTGACACTAAGCAAG +
Preference number: 2 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLPDSSY*LLTLSK
Trigger: CTTGCTTAGTGTCAGAAGGCAATAGCTGGAATCTGG...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTGAGTATTGGTGGTCCTaGTACCCGGCCGATATCTAT +
Preference number: 2 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPEYWWS*YPADIY
Trigger: ATAGATATCGGCCGGGTAGCAGGACCACCAATACTC...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCCCAACGCTGTAGGTaGGCGAGTCGCGAGTCACCT +
Preference number: 2 (lower is better)
Translates to: FDIPVWASLLINGVVSYRPQRCR*ASRESP
Trigger: AGGTGACTCGCGACTCGCGCACCTACAGCGTTGGGG...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGATTGGTTGGAGGTGCTTaGCTGTCCCGCGGCTCCGTG +
Preference number: 2 (lower is better)
Translates to: FDIPVWASLLINGVVSYRLVGGA*LSRGSV
Trigger: CACGGAGCCGCGGGACAGCCAAGCACCTCCAACCAA...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGAGAAGCATCATCGAGTaGAAGTCTTATTTGGTTGGA +
Preference number: 2 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMRSIIE*KSYLVG
Trigger: TCCAACCAAATAAGACTTCCACTCGATGATGCTTCT...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACATCAAGATGGACAAACTaGTACATCACACCCCTGCTG +
Preference number: 2 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTSRWTN*YITPLL
Trigger: CAGCAGGGGTGTGATGTACCAGTTTGTCCATCTTGA...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACACCTCAGGAGAGGTATTaGAAAGTCCTTAAGAATAAC +
Preference number: 2 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTPQERY*KVLKNN
Trigger: GTTATTCTTAAGGACTTTCCAATACCTCTCCTGAGG...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCACTGTGGATTTCCTTaGTGTGGGGTTTGCCTATTC +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRHCGFP*CGVCLF
Trigger: GAATAGGCAAACCCCACACCAAGGAAATCCACAGTG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTTCTTTAATCACCAGGTaGCATCTTAGTCGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: QREPRRQSEASQLSTATASLITR*HLSRVK
Trigger: CTTCACACGACTAAGATGCCACCTGGTGATTAAAGA...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCCAAGGCTGCTTTCTCTaGGATGGGGCTGAGTGGCAC +
Preference number: 2 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLQGCFL*DGAEWH
Trigger: GTGCCACTCAGCCCCATCCCAGAGAAAGCAGCCTTG...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAGAATTTCCCAGTGGATaGTCACAGGCCACCAGCTCC +
Preference number: 2 (lower is better)
Translates to: PEVEEVEEGADASGVTFTEFPSG*SQATSS
Trigger: GGAGCTGGTGGCCTGTGACCATCCACTGGGAAATTC...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCGAATTTCCCAGTGGATaGTCACAGGCCACCAGCTCC +
Preference number: 2 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTEFPSG*SQATSS
Trigger: GGAGCTGGTGGCCTGTGACCATCCACTGGGAAATTC...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCCGTACTGCTCCAGCGTaGAGGGGTCGGTCACTACGC +
Preference number: 2 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTRTAPA*RGRSLR
Trigger: GCGTAGTGACCGACCCCTCCACGCTGGAGCAGTACG...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGATCCTCGTGGTATATGTaGTCTGTCTGCCATCGCTGG +
Preference number: 2 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERSSWYM*SVCHRW
Trigger: CCAGCGATGGCAGACAGACCACATATACCACGAGGA...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp GCTGATCGTTGGGCTTCACCTGGCATATGTTGGCTCCAGAGCACGCCGGGTTTCTTTCTCAATTCCGACTaGCCTTGCTGGCTTCCAATT +
Preference number: 2 (lower is better)
Translates to: ADRWASPGICWLQSTPGFFLNSD*PCWLPI
Trigger: AATTGGAAGCCAGCAAGGCCAGTCGGAATTGAGAAA...GAAACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGTGGACTTGTCACTTGTaGGGCAGACGTCTGAGGAAA +
Preference number: 2 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLWTCHL*GRRLRK
Trigger: TTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCA...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGACACGCGGCTGCTTCTaGAGGGCACGGCTCAGTGCC +
Preference number: 2 (lower is better)
Translates to: IGPHVPRGSEQLKINISETRGCF*RARLSA
Trigger: GGCACTGAGCCGTGCCCTCCAGAAGCAGCCGCGTGT...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCGTGGAGGAGGCAGCTaGATCTCTTCCATCAGCCAC +
Preference number: 2 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVRGGGS*ISSISH
Trigger: GTGGCTGATGGAAGAGATCCAGCTGCCTCCTCCACG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCTCTGCTGTGCAGAGCTaGACTTCCCTTTCCTCGCCT +
Preference number: 2 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTSAVQS*TSLSSP
Trigger: AGGCGAGGAAAGGGAAGTCCAGCTCTGCACAGCAGA...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAACTGTACGCCCAGGCTTaGAGATATCATGCAAAAAGG +
Preference number: 2 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQLYAQA*RYHAKR
Trigger: CCTTTTTGCATGATATCTTCAAGCCTGGGCGTACAG...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGTGTAGGAATGCCTGGTaGTGGGAAGAAACTTCATCT +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRCRNAW*WEETSS
Trigger: AGATGAAGTTTCTTCCCATCACCAGGCATTCCTACA...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGAATGAGTGTACCTCCCTaGGCCATGGGATTCTTCAGA +
Preference number: 2 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERMSVPP*AMGFFR
Trigger: TCTGAAGAATCCCATGGCTCAGGGAGGTACACTCAT...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTTCAAACTCCTTACTGTaGCAGTCACAACAGGCTCCA +
Preference number: 2 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPSNSLL*QSQQAP
Trigger: TGGAGCCTGTTGTGACTGTCACAGTAAGGAGTTTGA...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTTCAAACTCCTTACTGTaGCAGTCACAACAGGCTCCA +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSSNSLL*QSQQAP
Trigger: TGGAGCCTGTTGTGACTGTCACAGTAAGGAGTTTGA...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACAGAAATACAAATAACTaGCCATTCACAGCCTACCTT +
Preference number: 2 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDRNTNN*PFTAYL
Trigger: AAGGTAGGCTGTGAATGGTCAGTTATTTGTATTTCT...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCGTTTCCCTCAAACACTaGGCATCAAAACAACATTAT +
Preference number: 2 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVVSLKH*ASKQHY
Trigger: ATAATGTTGTTTTGATGCTCAGTGTTTGAGGGAAAC...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGGGCCATTTTCTATTGTaGTTTCACGTGTGGTCAGCA +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRGHFLL*FHVWSA
Trigger: TGCTGACCACACGTGAAATCACAATAGAAAATGGCC...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGAATTTGAGGGGCCCTaGGTAAACATCATCATTGCA +
Preference number: 2 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQEFEGP*VNIIIA
Trigger: TGCAATGATGATGTTTACTCAGGGCCCCTCAAATTC...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCATGCCATCTCTCCACTaGGGTCCGTCCCTTACCCTG +
Preference number: 2 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALMPSLH*GPSLTL
Trigger: CAGGGTAAGGGACGGACCTCAGTGGAGAGATGGCAT...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTGCCTGCACACGAAACTaGTCACACTCTTATAGCTCA +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSACTRN*SHSYSS
Trigger: TGAGCTATAAGAGTGTGATCAGTTTCGTGTGCAGGC...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCCAGGCTGAGGGATGCTaGAGGGCGGTTTGCTTCTCA +
Preference number: 2 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALQAEGC*RAVCFS
Trigger: TGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAGCAGGCAGCCAGTGGTaGAGACAACATGCCTTTTTG +
Preference number: 2 (lower is better)
Translates to: PEVEEVEEGADASGVTFTAGSQW*RQHAFL
Trigger: CAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGC...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTAAGAGTCAAAGCAAATaGACTCAAACGTGTTGTCAC +
Preference number: 2 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCKSQSK*TQTCCH
Trigger: GTGACAACACGTTTGAGTGCATTTGCTTTGACTCTT...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTTCCAAGTTCTGGGCTTaGTTCTGCCTTACCTATCCA +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSSKFWA*FCLTYP
Trigger: TGGATAGGTAAGGCAGAAGCAAGCCCAGAACTTGGA...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTTCACTTCATTTGAACTaGAGTTACGCAGAATGCAGA +
Preference number: 2 (lower is better)
Translates to: QREPRRQSEASQLSTATASLHLN*SYAECR
Trigger: TCTGCATTCTGCGTAACTGCAGTTCAAATGAAGTGA...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGGGTGGGCAGGCATACTaGGTTCGCCACTCAAACAAG +
Preference number: 2 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVGGQAY*VRHSNK
Trigger: CTTGTTTGAGTGGCGAACGCAGTATGCCTGCCCACC...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAACATTCTCCCCACAGATaGTCATGTAAACCAACCCCT +
Preference number: 2 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQHSPHR*SCKPTP
Trigger: AGGGGTTGGTTTACATGAGCATCTGTGGGGAGAATG...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGAAAGAGAGTGCATGTCTaGTTGTCCAGGGAGATGAGC +
Preference number: 2 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERKRVHV*LSREMS
Trigger: GCTCATCTCCCTGGACAAGCAGACATGCACTCTCTT...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGTTCTATCACGGAGGATaGGGTCTTATTTCCACCACA +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRFYHGG*GLISTT
Trigger: TGTGGTGGAAATAAGACCGCATCCTCCGTGATAGAA...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAAGTGGAAGTCTTATTTaGTTGGAGGTGCTTGGCTGT +
Preference number: 2 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTSGSLI*LEVLGC
Trigger: ACAGCCAAGCACCTCCAACCAAATAAGACTTCCACT...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTAGTGGAAGTCTTATTTaGTTGGAGGTGCTTGGCTGT +
Preference number: 2 (lower is better)
Translates to: APCDPIANRGKTCVPISASGSLI*LEVLGC
Trigger: ACAGCCAAGCACCTCCAACCAAATAAGACTTCCACT...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTCCTCAGGAGAGGTATTaGAAAGTCCTTAAGAATAAC +
Preference number: 2 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCPQERY*KVLKNN
Trigger: GTTATTCTTAAGGACTTTCCAATACCTCTCCTGAGG...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCTGTCTCTGTCATTCATaGACAGTCTCAAGAAAGGGG +
Preference number: 2 (lower is better)
Translates to: PVWASLLINGVVSYRPPTCLCHS*TVSRKG
Trigger: CCCCTTTCTTGAGACTGTCCATGAATGACAGAGACA...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATGGTCAGAACCTCATCCTATTTCCACTTCACTGTaGATTTCCTTGGTGTGGGGT +
Preference number: 2 (lower is better)
Translates to: QLPCPSELSPLGWSEPHPISTSL*ISLVWG
Trigger: ACCCCACACCAAGGAAATCCACAGTGAAGTGGAAAT...AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCACAGGCTCCAAGTTCTaGGCTTGCTTCTGCCTTACC +
Preference number: 2 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTTGSKF*ACFCLT
Trigger: GGTAAGGCAGAAGCAAGCCCAGAACTTGGAGCCTGT...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACCTCCGTGGGAGCCTCTaGAAAACAACAGAACCTCGC +
Preference number: 2 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDLRGSL*KTTEPR
Trigger: GCGAGGTTCTGTTGTTTTCCAGAGGCTCCCACGGAG...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTTCCTCTTGGCACCGCTaGTTTAGACAACTCACTTCA +
Preference number: 2 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPSSWHR*FRQLTS
Trigger: TGAAGTGAGTTGTCTAAACCAGCGGTGCCAAGAGGA...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGCGAGGTTCACGGGCTTaGAGCCACCCAGCAGACACG +
Preference number: 2 (lower is better)
Translates to: IGPHVPRGSEQLKINISERGSRA*SHPADT
Trigger: CGTGTCTGCTGGGTGGCTCCAAGCCCGTGAACCTCG...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTGCCTATTGGTTGGCCTaGCCTCAGGCCTGCACACGA +
Preference number: 2 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLAYWLA*PQACTR
Trigger: TCGTGTGCAGGCCTGAGGCCAGGCCAACCAATAGGC...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGTAGAAATCAGGGTTaGTATCGGAGGCATCATCCT +
Preference number: 2 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPCRNQG*YRRHHP
Trigger: AGGATGATGCCTCCGATACCAACCCTGATTTCTACA...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAGGACGTCACCAGTTGTaGTCCTTCTGCAAATGCTGG +
Preference number: 2 (lower is better)
Translates to: PEVEEVEEGADASGVTFTGRHQL*SFCKCW
Trigger: CCAGCATTTGCAGAAGGACCACAACTGGTGACGTCC...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CAA 90 bp GCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTaGGTAACCACCATTCCACTCTCTGCTTCTGAGTCCAACCTTTTT +
Preference number: 2 (lower is better)
Translates to: APFHQHLLTSCTLWP*VTTIPLSASESNLF
Trigger: AAAAAGGTTGGACTCAGAAGCAGAGAGTGGAATGGTGGTTACCAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CAA 90 bp AATTCCGACTGGCCTTGCTGGCTTCCAATTCTTGAGCTCTTCAGTTaGGGTTTCTGCCTCACAGCCAGAAGCAGGTTTTCCCAGGATGGT +
Preference number: 2 (lower is better)
Translates to: NSDWPCWLPILELFS*GFCLTARSRFSQDG
Trigger: ACCATCCTGGGAAAACCTGCTTCTGGCTGTGAGGCAGAAACCCAAACTGAAGAGCTCAAGAATTGGAAGCCAGCAAGGCCAGTCGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CAA 90 bp TGGAGGCTTTTCTCAATTCCGACTGGCCTTGCTGGCTTCCAATTCTaGAGCTCTTCAGTTTGGGTTTCTGCCTCACAGCCAGAAGCAGGT +
Preference number: 2 (lower is better)
Translates to: WRLFSIPTGLAGFQF*SSSVWVSASQPEAG
Trigger: ACCTGCTTCTGGCTGTGAGGCAGAAACCCAAACTGAAGAGCTCAAGAATTGGAAGCCAGCAAGGCCAGTCGGAATTGAGAAAAGCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CAA 90 bp AACTTAAAACGACCGCTTCATCCTGGTGCCTGTAATCCAGTTTCATaGATTGCAGCCGTCCAAAGGATGCCCCCTTGGTGCCTGAGAGCA +
Preference number: 2 (lower is better)
Translates to: NLKRPLHPGACNPVS*IAAVQRMPPWCLRA
Trigger: TGCTCTCAGGCACCAAGGGGGCATCCTTTGGACGGCTGCAATCAATGAAACTGGATTACAGGCACCAGGATGAAGCGGTCGTTTTAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCTGCAGCCCTCTGTTTTaGGATGCGTCCGGCCTTATG +
Preference number: 2 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALCSPLF*DASGLM
Trigger: CATAAGGCCGGACGCATCTCAAAACAGAGGGCTGCA...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGGAGAACCTGAAGAGATaGGACCTATACCCCAAATCT +
Preference number: 2 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLENLKR*DLYPKS
Trigger: AGATTTGGGGTATAGGTCTCATCTCTTCAGGTTCTC...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTGGTATCATGAGAACCTaGAGAGATGAGACCTATACC +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSGIMRT*RDETYT
Trigger: GGTATAGGTCTCATCTCTTCAGGTTCTCATGATACC...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACACGAGGCTCTGGCCCATaGTTTTTCATGCAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: PEVEEVEEGADASGVTFTRGSGP*FFMQFL
Trigger: CAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCG...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATCAAACCGGTACAGGCTaGGGGATGCTGCAGGGCGGT +
Preference number: 2 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNQTGTG*GMLQGG
Trigger: ACCGCCCTGCAGCATCCCTCAGCCTGTACCGGTTTG...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTGACTCTGGAGAAAAATaGAAGTGCTGCCTCATAAAG +
Preference number: 2 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLDSGEK*KCCLIK
Trigger: CTTTATGAGGCAGCACTTTCATTTTTCTCCAGAGTC...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAAAAAGAGTCCAATTCTaGTTTGCTGTCACGGGATGT +
Preference number: 2 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTKRVQF*FAVTGC
Trigger: ACATCCCGTGACAGCAAATCAGAATTGGACTCTTTT...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTCTATATGTTCCTTCCTaGGGAATCATCTCGTGTTAC +
Preference number: 2 (lower is better)
Translates to: APCDPIANRGKTCVPISALYVPS*GIISCY
Trigger: GTAACACGAGATGATTCCTCAGGAAGGAACATATAG...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAATGTAGGAATGCCTGGTaGTGGGAAGAAACTTCATCT +
Preference number: 2 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQCRNAW*WEETSS
Trigger: AGATGAAGTTTCTTCCCATCACCAGGCATTCCTACA...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAATGAGTGTACCTCCCTaGGCCATGGGATTCTTCAGA +
Preference number: 2 (lower is better)
Translates to: PEVEEVEEGADASGVTFTMSVPP*AMGFFR
Trigger: TCTGAAGAATCCCATGGCTCAGGGAGGTACACTCAT...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTGGCCATTTTCTATTGTaGTTTCACGTGTGGTCAGCA +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSGHFLL*FHVWSA
Trigger: TGCTGACCACACGTGAAATCACAATAGAAAATGGCC...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATGGTCAGAACCTCATCCTAGCCCCATCTTTGAATaGACATTCAGTCAGATCGAA +
Preference number: 2 (lower is better)
Translates to: QLPCPSELSPLGWSEPHPSPIFE*TFSQIE
Trigger: TTCGATCTGACTGAATGTTCATTCAAAGATGGGGCT...AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCATGCCATCTCTCCACTaGGGTCCGTCCCTTACCCTG +
Preference number: 2 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTMPSLH*GPSLTL
Trigger: CAGGGTAAGGGACGGACCTCAGTGGAGAGATGGCAT...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTGTAATCCAGTTTCATTaGTTGCAGCCGTCCAAAGGA +
Preference number: 2 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPVIQFH*LQPSKG
Trigger: TCCTTTGGACGGCTGCAATCAATGAAACTGGATTAC...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCCACTCGGGGACCCTGTaGACGTATGTGTGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTHSGTL*TYVCVC
Trigger: GCACACACACACATACGTGCACAGGGTCCCCGAGTG...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGGTAAGTCACACACTGTaGAAATTAAGGCTTCTTATA +
Preference number: 2 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMVSHTL*KLRLLI
Trigger: TATAAGAAGCCTTAATTTGCACAGTGTGTGACTTAC...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACGTAAGTCACACACTGTaGAAATTAAGGCTTCTTATA +
Preference number: 2 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDVSHTL*KLRLLI
Trigger: TATAAGAAGCCTTAATTTGCACAGTGTGTGACTTAC...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCTGCTGCAGGGCGGTTTaGTTCTCAGCAATAGAACAC +
Preference number: 2 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTCCRAV*FSAIEH
Trigger: GTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCA...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACAGGCTGAGGGATGCTaGAGGGCGGTTTGCTTCTCA +
Preference number: 2 (lower is better)
Translates to: FDIPVWASLLINGVVSYRQAEGC*RAVCFS
Trigger: TGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCGCCCCCTGGGTAGAATaGCTGAGGACCAGCATCTTT +
Preference number: 2 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALAPWVE*LRTSIF
Trigger: AAAGATGCTGGTCCTCAGGCATTCTACCCAGGGGGC...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTAGTCCAATTCTGATTTaGTGTCACGGGATGTTTTCC +
Preference number: 2 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPSPILI*CHGMFS
Trigger: GGAAAACATCCCGTGACAGCAAATCAGAATTGGACT...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACATCAATGTGGCTATCTTaGCGCCTTGCACACAAGCTC +
Preference number: 2 (lower is better)
Translates to: PEVEEVEEGADASGVTFTSMWLS*RLAHKL
Trigger: GAGCTTGTGTGCAAGGCGGCAAGATAGCCACATTGA...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCTTCTGGGCTTGCTTCTaGCTTACCTATCCAACACCC +
Preference number: 2 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTFWACF*LTYPTP
Trigger: GGGTGTTGGATAGGTAAGGCAGAAGCAAGCCCAGAA...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGATCCAAGTTCTGGGCTTaGTTCTGCCTTACCTATCCA +
Preference number: 2 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERSKFWA*FCLTYP
Trigger: TGGATAGGTAAGGCAGAAGCAAGCCCAGAACTTGGA...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACACAAATGTCTAGGAATTaGTGCCTACCTGGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: PEVEEVEEGADASGVTFTQMSRN*CLPGGL
Trigger: CAGGCCTCCAGGTAGGCAGCAATTCCTAGACATTTG...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGATTTCAGGACAATTATaGCATCTCTCCACTGAGGTC +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRISGQL*HLSTEV
Trigger: GACCTCAGTGGAGAGATGGCATAATTGTCCTGAAAT...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTGTTTCTGGACGAATTTaGACTCCAACTTCTTTGGAG +
Preference number: 2 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLVSGRI*TPTSLE
Trigger: CTCCAAAGAAGTTGGAGTGCAAATTCGTCCAGAAAC...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGGCTTTATTGACTCACTaGACTCTAAACTCCATGTTC +
Preference number: 2 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEALLTH*TLNSMF
Trigger: GAACATGGAGTTTAGAGTCCAGTGAGTCAATAAAGC...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCTGGAGAACAGCCCCCTaGGTAGAATGCCTGAGGACC +
Preference number: 2 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTWRTAP*VECLRT
Trigger: GGTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCA...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGGAGGTGGGAATGGCCTaGAGAACAGCCCCCTGGGTA +
Preference number: 2 (lower is better)
Translates to: IGPHVPRGSEQLKINISEEVGMA*RTAPWV
Trigger: TACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTC...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp GTGGAAGAAGATGGTGGAAGAAACAGACTTGGTCTTATCCTTTCCGCACTTAGAAGCAGGAGGTGGGAATaGCCTGGAGAACAGCCCCCT +
Preference number: 2 (lower is better)
Translates to: VEEDGGRNRLGLILSALRSRRWE*PGEQPP
Trigger: AGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGCT...TCTAAGTGCGGAAAGGATAAGACCAAGTCTGTTTCTTCCACCATCTTCTTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCTGGGATGGGGCTGAGTaGCACCAGATGACCTCACCT +
Preference number: 2 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTWDGAE*HQMTSP
Trigger: AGGTGAGGTCATCTGGTGCCACTCAGCCCCATCCCA...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTTGGGATGGGGCTGAGTaGCACCAGATGACCTCACCT +
Preference number: 2 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLWDGAE*HQMTSP
Trigger: AGGTGAGGTCATCTGGTGCCACTCAGCCCCATCCCA...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTTGGGATGGGGCTGAGTaGCACCAGATGACCTCACCT +
Preference number: 2 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIWDGAE*HQMTSP
Trigger: AGGTGAGGTCATCTGGTGCCACTCAGCCCCATCCCA...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GTGGAAGAAGATGGTGGAAGAAACAGACTTGGTCTTATCCTTTCCGCACTTAGAGTTGCAGCCCGGCACTaGATTCAGAGGCCGACACAC +
Preference number: 2 (lower is better)
Translates to: VEEDGGRNRLGLILSALRVAARH*IQRPTH
Trigger: GTGTGTCGGCCTCTGAATCCAGTGCCGGGCTGCAAC...TCTAAGTGCGGAAAGGATAAGACCAAGTCTGTTTCTTCCACCATCTTCTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAACCAGCTGCAGGACCTaGTCCACGTATCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: FDIPVWASLLINGVVSYRTSCRT*STYLSL
Trigger: GAGGCTGAGATACGTGGACCAGGTCCTGCAGCTGGT...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCAATCTCATTTGCTATTaGATTGAGTATTGGTGGTCC +
Preference number: 2 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPNLICY*IEYWWS
Trigger: GGACCACCAATACTCAATCCAATAGCAAATGAGATT...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATACACGCGGCTGCTTCTaGAGGGCACGGCTCATGGCT +
Preference number: 2 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNTRGCF*RARLMA
Trigger: AGCCATGAGCCGTGCCCTCCAGAAGCAGCCGCGTGT...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677704.1
3UTR-3UTR TCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTTGCAGCCCTCTGTTTTaGGATGCGTCCGGCCTTATG +
Preference number: 2 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAICSPLF*DASGLM
Trigger: CATAAGGCCGGACGCATCTCAAAACAGAGGGCTGCA...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTAGCTGCCCCATACACTaGCAGCCTCACCATCTCAAG +
Preference number: 2 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAISCPIH*QPHHLK
Trigger: CTTGAGATGGTGAGGCTGTCAGTGTATGGGGCAGCT...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCAGCCGGCAAAAATACTaGCAAATGTGCTCTGTACGC +
Preference number: 2 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTSRQKY*QMCSVR
Trigger: GCGTACAGAGCACATTTGTCAGTATTTTTGCCGGCT...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTAAAAGAGTCCAATTCTaGTTTGCTGTCACGGGATGT +
Preference number: 2 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPKRVQF*FAVTGC
Trigger: ACATCCCGTGACAGCAAATCAGAATTGGACTCTTTT...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTCTATATGTTCCTTCCTaGGGAATCATCTCGTGTTAC +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSLYVPS*GIISCY
Trigger: GTAACACGAGATGATTCCTCAGGAAGGAACATATAG...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCGGCATCTTAGTCGTGTaGAGGTCCTTGTTTGTAGGA +
Preference number: 2 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTGILVV*RSLFVG
Trigger: TCCTACAAACAAGGACCTTCACACGACTAAGATGCC...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCATGAGTGTACCTCCCTaGGCCATGGGATTCTTCAGA +
Preference number: 2 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLMSVPP*AMGFFR
Trigger: TCTGAAGAATCCCATGGCTCAGGGAGGTACACTCAT...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTACCACGACTGCCCGTTaGCCCCATTCTCACAGAACA +
Preference number: 2 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLTTTAR*PHSHRT
Trigger: TGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGT...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCTCAAACTCCTTACTGTaGCAGTCACAACAGGCTCCA +
Preference number: 2 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTSNSLL*QSQQAP
Trigger: TGGAGCCTGTTGTGACTGTCACAGTAAGGAGTTTGA...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCTCCCATCTGGTTGCTaGAGCGTCTCCATCTCTTTA +
Preference number: 2 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVLPSGC*SVSISL
Trigger: TAAAGAGATGGAGACGCTTCAGCAACCAGATGGGAG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTCCATTCTGGCAGGTGTaGGGCAACGTCTCACTGTGT +
Preference number: 2 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIPFWQV*GNVSLC
Trigger: ACACAGTGAGACGTTGCCTCACACCTGCCAGAATGG...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTACCCACGCACTTCACTaGAGACTTGTGGCCTCCCAA +
Preference number: 2 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLTHALH*RLVASQ
Trigger: TTGGGAGGCCACAAGTCTTCAGTGAAGTGCGTGGGT...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCCAGAGGACACACGGCTaGGGTGTACCAAGAGAAGAG +
Preference number: 2 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTQRTHG*GVPREE
Trigger: CTCTTCTCTTGGTACACCTCAGCCGTGTGTCCTCTG...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCCCCTCTGTTTTGAGATaGGTCCGGCCTTATGCTTTT +
Preference number: 2 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTPSVLR*VRPYAF
Trigger: AAAAGCATAAGGCCGGACGCATCTCAAAACAGAGGG...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAGCCCATGATTTTTCATaGAGTTTCTGTAAGTCACAC +
Preference number: 2 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTAHDFS*SFCKSH
Trigger: GTGTGACTTACAGAAACTGCATGAAAAATCATGGGC...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTGTACAGGCTGAGGGATaGTGCAGGGCGGTTTGCTTC +
Preference number: 2 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVVQAEG*CRAVCF
Trigger: GAAGCAAACCGCCCTGCAGCATCCCTCAGCCTGTAC...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTAAGAGTCAAAGCAAATaGACTCAAACGTGTTGTCAC +
Preference number: 2 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPKSQSK*TQTCCH
Trigger: GTGACAACACGTTTGAGTGCATTTGCTTTGACTCTT...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCTGTGTACCCATCAGTaGTTTAACTTGTACAATGGA +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRLCTHQ*FNLYNG
Trigger: TCCATTGTACAAGTTAAAGCACTGATGGGTACACAG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTCTGTGTACCCATCAGTaGTTTAACTTGTACAATGGA +
Preference number: 2 (lower is better)
Translates to: APCDPIANRGKTCVPISALCTHQ*FNLYNG
Trigger: TCCATTGTACAAGTTAAAGCACTGATGGGTACACAG...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGCCAGCATCCCAAGGCTaGTTTCTCTGGGATGGGGCT +
Preference number: 2 (lower is better)
Translates to: IGPHVPRGSEQLKINISEPASQG*FLWDGA
Trigger: AGCCCCATCCCAGAGAAAGCAGCCTTGGGATGCTGG...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACTTGAACCTGACTTCCTaGTTCCTTCCAGGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDLNLTS*FLPGLC
Trigger: ACAGAGCCCTGGAAGGAAGCAGGAAGTCAGGTTCAA...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTTTCCACGGGGCACACTaGGAAAAATGTTTCTATATG +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSFHGAH*EKCFYM
Trigger: CATATAGAAACATTTTTCGCAGTGTGCCCCGTGGAA...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGAGGATTTCCTTCTTCTaGAAGACTTGGTATTCCACT +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRRISFF*KTWYST
Trigger: AGTGGAATACCAAGTCTTGCAGAAGAAGGAAATCCT...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCTTCAGTTTGGGTTTCTaGCTCACAGCCAGAAGCAGG +
Preference number: 2 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLFSLGF*LTARSR
Trigger: CCTGCTTCTGGCTGTGAGGCAGAAACCCAAACTGAA...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCTGAGTCAGGAGACCTaGCACTTTGTGAAATCCCTG +
Preference number: 2 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVLSQET*HFVKSL
Trigger: CAGGGATTTCACAAAGTGGCAGGTCTCCTGACTCAG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGATACTGGCCGCTGGGTaGCGCGGTCACAGTAGAAGA +
Preference number: 2 (lower is better)
Translates to: IGPHVPRGSEQLKINISEILAAG*RGHSRR
Trigger: TCTTCTACTGTGACCGCGGCACCCAGCGGCCAGTAT...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGAGGATGCCCCCTTGGTaGCTGAGAGCAGACAGACTC +
Preference number: 2 (lower is better)
Translates to: IGPHVPRGSEQLKINISERMPPW*LRADRL
Trigger: GAGTCTGTCTGCTCTCAGGCACCAAGGGGGCATCCT...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTAGAAGCATCATCGAGTaGAAGTCTTATTTGGTTGGA +
Preference number: 2 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPRSIIE*KSYLVG
Trigger: TCCAACCAAATAAGACTTCCACTCGATGATGCTTCT...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGAGAAGCATCATCGAGTaGAAGTCTTATTTGGTTGGA +
Preference number: 2 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRRSIIE*KSYLVG
Trigger: TCCAACCAAATAAGACTTCCACTCGATGATGCTTCT...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCCTCAGGAGAGGTATTaGAAAGTCCTTAAGAATAAC +
Preference number: 2 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRPQERY*KVLKNN
Trigger: GTTATTCTTAAGGACTTTCCAATACCTCTCCTGAGG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGATGTCTCTGTCATTCATaGACAGTCTCAAGAAAGGGG +
Preference number: 2 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERCLCHS*TVSRKG
Trigger: CCCCTTTCTTGAGACTGTCCATGAATGACAGAGACA...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCTCAAAAGCCCAATCTaGCCCTCCTACAGCTCTCAA +
Preference number: 2 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVLKSPI*PSYSSQ
Trigger: TTGAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCCCCACCATCACTTCTTaGTTGTCACCGAGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTPTITS*LSPRPA
Trigger: TGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGG...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAGAATTTCCCAGTGGATaGTCACAGGCCACCAGCTCC +
Preference number: 2 (lower is better)
Translates to: FDIPVWASLLINGVVSYREFPSG*SQATSS
Trigger: GGAGCTGGTGGCCTGTGACCATCCACTGGGAAATTC...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACTCCGTGGGAGCCTCTaGAAAACAACAGAACCTCGC +
Preference number: 2 (lower is better)
Translates to: FDIPVWASLLINGVVSYRLRGSL*KTTEPR
Trigger: GCGAGGTTCTGTTGTTTTCCAGAGGCTCCCACGGAG...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTTTTTCATACTTCATCTaGCAAGCCGATGCATATCGG +
Preference number: 2 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPFSYFI*QADAYR
Trigger: CCGATATGCATCGGCTTGCCAGATGAAGTATGAAAA...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTGGCCTGGAGTTCACTTaGCTCTCGCTGCAGGTGAAT +
Preference number: 2 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIGLEFT*LSLQVN
Trigger: ATTCACCTGCAGCGAGAGCCAAGTGAACTCCAGGCC...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGTGCAGCCCTCTGTTTTaGGATGCGTCCGGCCTTATG +
Preference number: 2 (lower is better)
Translates to: IGPHVPRGSEQLKINISECSPLF*DASGLM
Trigger: CATAAGGCCGGACGCATCTCAAAACAGAGGGCTGCA...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACCTGTACGCCCAGGCTTaGAGATATCATGCAAAAAGG +
Preference number: 2 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHLYAQA*RYHAKR
Trigger: CCTTTTTGCATGATATCTTCAAGCCTGGGCGTACAG...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTAAAATTCATTTTCTCTaGCACCTCAACTCCACTCAC +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSKIHFL*HLNSTH
Trigger: GTGAGTGGAGTTGAGGTGTCAGAGAAAATGAATTTT...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTAAAATACACTCATGTTaGAATCAAACAAGCCAGCCA +
Preference number: 2 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLKIHSC*NQTSQP
Trigger: TGGCTGGCTTGTTTGATTTCAACATGAGTGTATTTT...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGGGCATCTTAGTCGTGTaGAGGTCCTTGTTTGTAGGA +
Preference number: 2 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVGILVV*RSLFVG
Trigger: TCCTACAAACAAGGACCTTCACACGACTAAGATGCC...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAAACAATGTCCAGAACTaGCAGCAAGTATGGCTCAAG +
Preference number: 2 (lower is better)
Translates to: PEVEEVEEGADASGVTFTNNVQN*QQVWLK
Trigger: CTTGAGCCATACTTGCTGTCAGTTCTGGACATTGTT...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTGTTTCCCTCAAACACTaGGCATCAAAACAACATTAT +
Preference number: 2 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLVSLKH*ASKQHY
Trigger: ATAATGTTGTTTTGATGCTCAGTGTTTGAGGGAAAC...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCGGCCATTTTCTATTGTaGTTTCACGTGTGGTCAGCA +
Preference number: 2 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTGHFLL*FHVWSA
Trigger: TGCTGACCACACGTGAAATCACAATAGAAAATGGCC...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp TGCCTCACAGCCAGAAGCAGGTTTTCCCAGGATGGTCCCACAGACAGGCATTGTACAACTCACTTCATTTaGACTGCAGTTACGCAGAAT +
Preference number: 2 (lower is better)
Translates to: CLTARSRFSQDGPTDRHCTTHFI*TAVTQN
Trigger: ATTCTGCGTAACTGCAGTTCAAATGAAGTGAGTTGT...ACAATGCCTGTCTGTGGGACCATCCTGGGAAAACCTGCTTCTGGCTGTGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAACATCCCATCATAATATaGAAGCTTCGCATTACTCAG +
Preference number: 2 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQHPIII*KLRITQ
Trigger: CTGAGTAATGCGAAGCTTTCATATTATGATGGGATG...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATCACTCGGGGACCCTGTaGACGTATGTGTGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNHSGTL*TYVCVC
Trigger: GCACACACACACATACGTGCACAGGGTCCCCGAGTG...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCACTGGAGTAACTTCCTaGTTCCATGCAGGTAGCTCT +
Preference number: 2 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLTGVTS*FHAGSS
Trigger: AGAGCTACCTGCATGGAAGCAGGAAGTTACTCCAGT...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTCTGTGTACCCATCAGTaGTTTAACTTGTACAATGGA +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSLCTHQ*FNLYNG
Trigger: TCCATTGTACAAGTTAAAGCACTGATGGGTACACAG...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTGACAATCCATACCTATaGCAACGGGATTTTCTAGTT +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSDNPYL*QRDFLV
Trigger: AACTAGAAAATCCCGTTGGCATAGGTATGGATTGTC...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTACTGTGTTTATGATGTaGATTTCCCTGATGATCAGC +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSTVFMM*ISLMIS
Trigger: GCTGATCATCAGGGAAATGCACATCATAAACACAGT...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCGCAATGAACAGGGGCTaGAGAGATCTCTTCAAGGTA +
Preference number: 2 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLAMNRG*RDLFKV
Trigger: TACCTTGAAGAGATCTCTGCAGCCCCTGTTCATTGC...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp AAACTCAAAGTAAGTGTTTCGGATCCCTTGCCCAGAGTCGATATCTTGATGCAGCCGATGCATATCGGTTaGAGCCCGGCACTGGATTCA +
Preference number: 2 (lower is better)
Translates to: KLKVSVSDPLPRVDILMQPMHIG*SPALDS
Trigger: TGAATCCAGTGCCGGGCTGCAACCGATATGCATCGG...CTGCATCAAGATATCGACTCTGGGCAAGGGATCCGAAACACTTACTTTGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTTCCTTGTACACCAGCTaGAGGACCTGGTCCACGTAT +
Preference number: 2 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLSLYTS*RTWSTY
Trigger: ATACGTGGACCAGGTCCTGCAGCTGGTGTACAAGGA...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTTTGGTTGGAGGTGCTTaGCTGTCCCGCGGCTCCGTG +
Preference number: 2 (lower is better)
Translates to: QASDALKMFIRTRFPLHCLVGGA*LSRGSV
Trigger: CACGGAGCCGCGGGACAGCCAAGCACCTCCAACCAA...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACTAGGGCCGAGGCTCTaGCCCATGATTTTTCATGCA +
Preference number: 2 (lower is better)
Translates to: FDIPVWASLLINGVVSYRLGPRL*PMIFHA
Trigger: TGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAG...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTACCACACCCCGAGGTTaGCCTGGAGAAGGTAAAGAA +
Preference number: 2 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAITTPRG*PGEGKE
Trigger: TTCTTTACCTTCTCCAGGCCAACCTCGGGGTGTGGT...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACCACTGTGGATTTCCTTaGTGTGGGGTTTGCCTATTC +
Preference number: 2 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDHCGFP*CGVCLF
Trigger: GAATAGGCAAACCCCACACCAAGGAAATCCACAGTG...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCACTGTGGATTTCCTTaGTGTGGGGTTTGCCTATTC +
Preference number: 2 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVHCGFP*CGVCLF
Trigger: GAATAGGCAAACCCCACACCAAGGAAATCCACAGTG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTGTCCCCAACTCAATGTaGCTATCTTGCCGCCTTGCA +
Preference number: 2 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIVPNSM*LSCRLA
Trigger: TGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGAC...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATCAAGGCTGCTTTCTCTaGGATGGGGCTGAGTGGCAC +
Preference number: 2 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNQGCFL*DGAEWH
Trigger: GTGCCACTCAGCCCCATCCCAGAGAAAGCAGCCTTG...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAGAATTGCTGCCTACCTaGAGGCCTGCTGGCCATTTT +
Preference number: 2 (lower is better)
Translates to: FDIPVWASLLINGVVSYRELLPT*RPAGHF
Trigger: AAAATGGCCAGCAGGCCTCCAGGTAGGCAGCAATTC...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTGAATTGCTGCCTACCTaGAGGCCTGCTGGCCATTTT +
Preference number: 2 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIELLPT*RPAGHF
Trigger: AAAATGGCCAGCAGGCCTCCAGGTAGGCAGCAATTC...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACCTTATAGAGCAAGCCTaGTCTGTATCCGTCGTTGTC +
Preference number: 2 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDLIEQA*SVSVVV
Trigger: GACAACGACGGATACAGACCAGGCTTGCTCTATAAG...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTAAAATACACTCATGTTaGAATCAAACAAGCCAGCCA +
Preference number: 2 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSKIHSC*NQTSQP
Trigger: TGGCTGGCTTGTTTGATTTCAACATGAGTGTATTTT...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACTGTAGGAATGCCTGGTaGTGGGAAGAAACTTCATCT +
Preference number: 2 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDCRNAW*WEETSS
Trigger: AGATGAAGTTTCTTCCCATCACCAGGCATTCCTACA...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGCATACAACCTCCTGGTaGCACACACACTGGCTCCTT +
Preference number: 2 (lower is better)
Translates to: IGPHVPRGSEQLKINISEHTTSW*HTHWLL
Trigger: AAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTATG...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTCCAGAGTCGATATCTTaGTGCAGGAATTTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIPESIS*CRNLRG
Trigger: GCCCCTCAAATTCCTGCATCAAGATATCGACTCTGG...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATGGTTCCCGCTTTTCCTaGCATGAGGAGACCACCTTG +
Preference number: 2 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNGSRFS*HEETTL
Trigger: CAAGGTGGTCTCCTCATGTCAGGAAAAGCGGGAACC...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACTGCCAGCCCCATCTTTaGATGAACATTCAGTCAGAT +
Preference number: 2 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDCQPHL*MNIQSD
Trigger: ATCTGACTGAATGTTCATTCAAAGATGGGGCTGGCA...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCCCCTCTGTTTTGAGATaGGTCCGGCCTTATGCTTTT +
Preference number: 2 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALPSVLR*VRPYAF
Trigger: AAAAGCATAAGGCCGGACGCATCTCAAAACAGAGGG...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTGTAAGTCACACACTGTaGAAATTAAGGCTTCTTATA +
Preference number: 2 (lower is better)
Translates to: APCDPIANRGKTCVPISAVSHTL*KLRLLI
Trigger: TATAAGAAGCCTTAATTTGCACAGTGTGTGACTTAC...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCTCAATGTGGCTATCTTaGCGCCTTGCACACAAGCTC +
Preference number: 2 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTSMWLS*RLAHKL
Trigger: GAGCTTGTGTGCAAGGCGGCAAGATAGCCACATTGA...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCTTGAACCTGACTTCCTaGTTCCTTCCAGGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTLNLTS*FLPGLC
Trigger: ACAGAGCCCTGGAAGGAAGCAGGAAGTCAGGTTCAA...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCCCTTTCACCAACATCTaGTCACTTCCTGCACCCTCT +
Preference number: 2 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTPFTNI*SLPAPS
Trigger: AGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGG...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTCCTTTCACCAACATCTaGTCACTTCCTGCACCCTCT +
Preference number: 2 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIPFTNI*SLPAPS
Trigger: AGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGG...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTCAGTTGTGGTCCTTCTaGAAATGCTGGCCCTTTCAG +
Preference number: 2 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIQLWSF*KCWPFQ
Trigger: CTGAAAGGGCCAGCATTTGCAGAAGGACCACAACTG...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTAGCAGGAGGTGGGAATaGCCTGGAGAACAGCCCCCT +
Preference number: 2 (lower is better)
Translates to: QASDALKMFIRTRFPLHCSRRWE*PGEQPP
Trigger: AGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGCT...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCAGCAGGAGGTGGGAATaGCCTGGAGAACAGCCCCCT +
Preference number: 2 (lower is better)
Translates to: VTERRNFPDRSKPNGTMISRRWE*PGEQPP
Trigger: AGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGCT...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCTTAGCAGGCAGCCAGTaGTGCAGACAACATGCCTTT +
Preference number: 2 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTLAGSQ*CRQHAF
Trigger: AAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAA...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCTGGATTTCCTTGGTGTaGGGTTTGCCTATTCCATCT +
Preference number: 2 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLWISLV*GLPIPS
Trigger: AGATGGAATAGGCAAACCCCACACCAAGGAAATCCA...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACATTTCCACTTCACTGTaGATTTCCTTGGTGTGGGGT +
Preference number: 2 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDISTSL*ISLVWG
Trigger: ACCCCACACCAAGGAAATCCACAGTGAAGTGGAAAT...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTAAGGGAATTTCCCAGTaGATGGTCACAGGCCACCAG +
Preference number: 2 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVKGISQ*MVTGHQ
Trigger: CTGGTGGCCTGTGACCATCCACTGGGAAATTCCCTT...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCTGCTCATCAACGGTGTaGTCTCATACAGACCACCCA +
Preference number: 2 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTCSSTV*SHTDHP
Trigger: TGGGTGGTCTGTATGAGACCACACCGTTGATGAGCA...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCGTCTGCCATCGCTGGTaGTGCAGGCCGACCCATTCA +
Preference number: 2 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIVCHRW*CRPTHS
Trigger: TGAATGGGTCGGCCTGCACCACCAGCGATGGCAGAC...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCCATTCGCCGCGGCTTaGGGACTCATCTGCACCACA +
Preference number: 2 (lower is better)
Translates to: QASDALKMFIRTRFPLHCPFAAA*GLICTT
Trigger: TGTGGTGCAGATGAGTCCCCAAGCCGCGGCGAATGG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCACAGTAGAAGAAGATaGCTGTGGAGCGCTGATAAA +
Preference number: 2 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVHSRRR*LWSADK
Trigger: TTTATCAGCGCTCCACAGCCATCTTCTTCTACTGTG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCAGGGCACTCCGTGCATaGGATTTAGTGGCTGACAAA +
Preference number: 2 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTRALRA*DLVADK
Trigger: TTTGTCAGCCACTAAATCCCATGCACGGAGTGCCCT...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCTATTGGATTGAGTATTaGTGGTCCTGCTACCCGGCC +
Preference number: 2 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTYWIEY*WSCYPA
Trigger: GGCCGGGTAGCAGGACCACCAATACTCAATCCAATA...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAATTTGTAGGACACGTTaGAACTTCTCCTACAGCAAG +
Preference number: 2 (lower is better)
Translates to: PEVEEVEEGADASGVTFTICRTR*NFSYSK
Trigger: CTTGCTGTAGGAGAAGTTCCAACGTGTCCTACAAAT...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAGGAGGGCACGGCTCATaGCTATTATTTCTATCTATT +
Preference number: 2 (lower is better)
Translates to: PEVEEVEEGADASGVTFTGGHGS*LLFLSI
Trigger: AATAGATAGAAATAATAGCCATGAGCCGTGCCCTCC...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677704.1
3UTR-3UTR TCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCCTGAGTGGCACCAGATaGCCTCACCTGGGTTGTGAG +
Preference number: 2 (lower is better)
Translates to: VTERRNFPDRSKPNGTMILSGTR*PHLGCE
Trigger: CTCACAACCCAGGTGAGGTCATCTGGTGCCACTCAG...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATCGTGACATGTTCCCCTaGGTTGTCCATGGCATACCA +
Preference number: 2 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNRDMFP*VVHGIP
Trigger: TGGTATGCCATGGACAACTCAGGGGAACATGTCACG...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATGTTGTCACTGTACCTTaGCAGGGACGAGAGGTCGAA +
Preference number: 2 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNVVTVP*QGREVE
Trigger: TTCGACCTCTCGTCCCTGTCAAGGTACAGTGACAAC...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAGGCCGATCTGAGCCATaGCTTATTCCAATGACTGTA +
Preference number: 2 (lower is better)
Translates to: FDIPVWASLLINGVVSYRGRSEP*LIPMTV
Trigger: TACAGTCATTGGAATAAGGCATGGCTCAGATCGGCC...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCCAGCATGAGGCCAAGTaGAATGCTAGGGCCGAGGCT +
Preference number: 2 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIQHEAK*NARAEA
Trigger: AGCCTCGGCCCTAGCATTGCACTTGGCCTCATGCTG...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCAGTCCAATTCTGATTTaGTGTCACGGGATGTTTTCC +
Preference number: 2 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLSPILI*CHGMFS
Trigger: GGAAAACATCCCGTGACAGCAAATCAGAATTGGACT...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCCACCTGCACCACGACTaGCCGTTGACCCCATTCTCA +
Preference number: 2 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIHLHHD*PLTPFS
Trigger: TGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTG...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGATCCAAGTTCTGGGCTTaGTTCTGCCTTACCTATCCA +
Preference number: 2 (lower is better)
Translates to: FDIPVWASLLINGVVSYRSKFWA*FCLTYP
Trigger: TGGATAGGTAAGGCAGAAGCAAGCCCAGAACTTGGA...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCTTCCACGGGGCACACTaGGAAAAATGTTTCTATATG +
Preference number: 2 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLFHGAH*EKCFYM
Trigger: CATATAGAAACATTTTTCGCAGTGTGCCCCGTGGAA...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTGCCACCTTCAGATTTTaGCAGACTGGAGAGGTCGTA +
Preference number: 2 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVATFRF*QTGEVV
Trigger: TACGACCTCTCCAGTCTGGCAAAATCTGAAGGTGGC...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCGAGACGTTATATCCTTaGGAACTGTTTAGCGGATTA +
Preference number: 2 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTETLYP*ELFSGL
Trigger: TAATCCGCTAAACAGTTCGCAAGGATATAACGTCTC...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCTGGAGAACAGCCCCCTaGGTAGAATGCCTGAGGACC +
Preference number: 2 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIWRTAP*VECLRT
Trigger: GGTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCA...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCTCTTTAATCACCAGGTaGCATCTTAGTCGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLSLITR*HLSRVK
Trigger: CTTCACACGACTAAGATGCCACCTGGTGATTAAAGA...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGTCTTTAATCACCAGGTaGCATCTTAGTCGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVSLITR*HLSRVK
Trigger: CTTCACACGACTAAGATGCCACCTGGTGATTAAAGA...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCCATGTGTCAAGGTCATaGAGGTTACAGAAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLHVSRS*RLQKGE
Trigger: TTCTCCTTTCTGTAACCTCCATGACCTTGACACATG...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACTTTGATATACCTGTTTaGGCCTCACTGCTCATCAAC +
Preference number: 2 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDFDIPV*ASLLIN
Trigger: GTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACTTCTTCTGCAAGACTTaGTATTCCACTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDFFCKT*YSTVCV
Trigger: CACACACACAGTGGAATACCAAGTCTTGCAGAAGAA...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTATGAGGAGACCACCTTaGACTTGTCACTTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: ITTSAMNKGRQVNNRASIMRRPP*TCHLWG
Trigger: GCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCAT...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCACGAGTCCCAGGACCTaGACGTCACCAGTTGTGGTC +
Preference number: 2 (lower is better)
Translates to: VTERRNFPDRSKPNGTMITSPRT*TSPVVV
Trigger: GACCACAACTGGTGACGTCCAGGTCCTGGGACTCGT...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCAGTGGAAGAAGATGGTaGAAGAAACAGACTTGGTCT +
Preference number: 2 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLSGRRW*KKQTWS
Trigger: AGACCAAGTCTGTTTCTTCCACCATCTTCTTCCACT...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CAA 90 bp CCTTGCGAACTGTTTAGCGGATTAAGATTAAACACAAATCCACTGTaGGGATCCCTTATAGAGCAAGCCTGGTCTGTATCCGTCGTTGTC +
Preference number: 2 (lower is better)
Translates to: PCELFSGLRLNTNPL*GSLIEQAWSVSVVV
Trigger: GACAACGACGGATACAGACCAGGCTTGCTCTATAAGGGATCCCAACAGTGGATTTGTGTTTAATCTTAATCCGCTAAACAGTTCGCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTTGCAGCCCTCTGTTTTaGGATGCGTCCGGCCTTATG +
Preference number: 2 (lower is better)
Translates to: QASDALKMFIRTRFPLHCCSPLF*DASGLM
Trigger: CATAAGGCCGGACGCATCTCAAAACAGAGGGCTGCA...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTGGCATCTTAGTCGTGTaGAGGTCCTTGTTTGTAGGA +
Preference number: 2 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVGILVV*RSLFVG
Trigger: TCCTACAAACAAGGACCTTCACACGACTAAGATGCC...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCAACAATGTCCAGAACTaGCAGCAAGTATGGCTCAAG +
Preference number: 2 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTNNVQN*QQVWLK
Trigger: CTTGAGCCATACTTGCTGTCAGTTCTGGACATTGTT...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTACTGGAGTAACTTCCTaGTTCCATGCAGGTAGCTCT +
Preference number: 2 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVTGVTS*FHAGSS
Trigger: AGAGCTACCTGCATGGAAGCAGGAAGTTACTCCAGT...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGGACAATCCATACCTATaGCAACGGGATTTTCTAGTT +
Preference number: 2 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVDNPYL*QRDFLV
Trigger: AACTAGAAAATCCCGTTGGCATAGGTATGGATTGTC...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTTTCTATCACGGAGGATaGGGTCTTATTTCCACCACA +
Preference number: 2 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIFYHGG*GLISTT
Trigger: TGTGGTGGAAATAAGACCGCATCCTCCGTGATAGAA...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTACAATCAGGAAGGAGTaGGGCCTGACCTCCTTCACC +
Preference number: 2 (lower is better)
Translates to: QASDALKMFIRTRFPLHCTIRKE*GLTSFT
Trigger: GGTGAAGGAGGTCAGGCCCCACTCCTTCCTGATTGT...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTAGCAGGAGGTGGGAATaGCCTGGAGAACAGCCCCCT +
Preference number: 2 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCSRRWE*PGEQPP
Trigger: AGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGCT...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGATGGATTTCCTTGGTGTaGGGTTTGCCTATTCCATCT +
Preference number: 2 (lower is better)
Translates to: FDIPVWASLLINGVVSYRWISLV*GLPIPS
Trigger: AGATGGAATAGGCAAACCCCACACCAAGGAAATCCA...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCTGGATTTCCTTGGTGTaGGGTTTGCCTATTCCATCT +
Preference number: 2 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTWISLV*GLPIPS
Trigger: AGATGGAATAGGCAAACCCCACACCAAGGAAATCCA...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTATTTCCACTTCACTGTaGATTTCCTTGGTGTGGGGT +
Preference number: 2 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIISTSL*ISLVWG
Trigger: ACCCCACACCAAGGAAATCCACAGTGAAGTGGAAAT...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTCCTAAAGCCGCTGGGTaGGGCAGGGCAAATCAGGCA +
Preference number: 2 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCPKAAG*GRANQA
Trigger: TGCCTGATTTGCCCTGCCCCACCCAGCGGCTTTAGG...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCACCCAGCATGCTCCGTaGGAGCCTCTGGAAAACAAC +
Preference number: 2 (lower is better)
Translates to: VTERRNFPDRSKPNGTMITQHAP*EPLENN
Trigger: GTTGTTTTCCAGAGGCTCCCACGGAGCATGCTGGGT...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTCAGATTTTGCCAGACTaGAGAGGTCGTACTGCTCCA +
Preference number: 2 (lower is better)
Translates to: ITTSAMNKGRQVNNRASIQILPD*RGRTAP
Trigger: TGGAGCAGTACGACCTCTCCAGTCTGGCAAAATCTG...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATAGGGCACTCCGTGCATaGGATTTAGTGGCTGACAAA +
Preference number: 2 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNRALRA*DLVADK
Trigger: TTTGTCAGCCACTAAATCCCATGCACGGAGTGCCCT...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCGGTAGTTGTCCCCATTaGTCCTCATGTCCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIGSCPH*SSCPQR
Trigger: CCTCTGGGGACATGAGGACCAATGGGGACAACTACC...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CAA 90 bp CAATCCATACCTATGCCAACGGGATTTTCTAGTTCAAGTATGATTTaGCAGTTAGACCCAAGGGCCCTCTCCCTAATTGTTCCTGAAGAG +
Preference number: 2 (lower is better)
Translates to: QSIPMPTGFSSSSMI*QLDPRALSLIVPEE
Trigger: CTCTTCAGGAACAATTAGGGAGAGGGCCCTTGGGTCTAACTGCAAAATCATACTTGAACTAGAAAATCCCGTTGGCATAGGTATGGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CAA 90 bp TTTATGATGTGCATTTCCCTGATGATCAGCGATGCTGAGCATTTTTaGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCT +
Preference number: 2 (lower is better)
Translates to: FMMCISLMISDAEHF*IYLFGPHCSSTVWS
Trigger: AGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAAAAATGCTCAGCATCGCTGATCATCAGGGAAATGCACATCATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACAAAATACACTCATGTTaGAATCAAACAAGCCAGCCA +
Preference number: 2 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDKIHSC*NQTSQP
Trigger: TGGCTGGCTTGTTTGATTTCAACATGAGTGTATTTT...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATGGCATCTTAGTCGTGTaGAGGTCCTTGTTTGTAGGA +
Preference number: 2 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNGILVV*RSLFVG
Trigger: TCCTACAAACAAGGACCTTCACACGACTAAGATGCC...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTGGTGAGCCCGATATCTaGGCACACTCAAACGTGATC +
Preference number: 2 (lower is better)
Translates to: QASDALKMFIRTRFPLHCGEPDI*AHSNVI
Trigger: GATCACGTTTGAGTGTGCTCAGATATCGGGCTCACC...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR TCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTCGCTGTAAGCAGCTGTaGATCCCGCCCTGCCACTTA +
Preference number: 2 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCRCKQL*IPPCHL
Trigger: TAAGTGGCAGGGCGGGATTCACAGCTGCTTACAGCG...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCAACCTTTGGAGTACGTaGCAACAACTTTGTCACCTA +
Preference number: 2 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTNLWST*QQLCHL
Trigger: TAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTT...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGGGTACATCACACCCCTaGTGGCAGGAAGAAACGGTG +
Preference number: 2 (lower is better)
Translates to: KGMENRMLSLRSLFITLEGTSHP*WQEETV
Trigger: CACCGTTTCTTCCTGCCAGCAGGGGTGTGATGTACC...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTGCAGGTCCCTGCATATaGCCCTCCTTACAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCAGPCI*PSLQRG
Trigger: CCCTCTCTGTAAGGAGGGGCATATGCAGGGACCTGC...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTCCGGGAGGCAGAGATTaGAGTGAGCCGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCPGGRD*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAATCTCTGCCTCCCGG...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGATTCCACGGGGCACACTaGGAAAAATGTTTCTATATG +
Preference number: 2 (lower is better)
Translates to: FDIPVWASLLINGVVSYRFHGAH*EKCFYM
Trigger: CATATAGAAACATTTTTCGCAGTGTGCCCCGTGGAA...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCTGCAGTTACGCAGAATaGAGAAATACGCACAGAGAT +
Preference number: 2 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTCSYAE*RNTHRD
Trigger: ATCTCTGTGCGTATTTCTGCATTCTGCGTAACTGCA...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGTCAGGTCATACAAGTTaGCATGCCTTGGGTCTTTCA +
Preference number: 2 (lower is better)
Translates to: IGPHVPRGSEQLKINISESGHTS*HALGLS
Trigger: TGAAAGACCCAAGGCATGGCAACTTGTATGACCTGA...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCATTTCAGGACAATTATaGCATCTCTCCACTGAGGTC +
Preference number: 2 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTISGQL*HLSTEV
Trigger: GACCTCAGTGGAGAGATGGCATAATTGTCCTGAAAT...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATATCAAACCTCTTGAATaGAGGTCTGCCCACCGTCTT +
Preference number: 2 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNIKPLE*RSAHRL
Trigger: AAGACGGTGGGCAGACCTGCATTCAAGAGGTTTGAT...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTTCAAGATGGACAAACTaGTACATCACACCCCTGCTG +
Preference number: 2 (lower is better)
Translates to: ITTSAMNKGRQVNNRASISRWTN*YITPLL
Trigger: CAGCAGGGGTGTGATGTACCAGTTTGTCCATCTTGA...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCACCACACCCCGAGGTTaGCCTGGAGAAGGTAAAGAA +
Preference number: 2 (lower is better)
Translates to: VTERRNFPDRSKPNGTMITTPRG*PGEGKE
Trigger: TTCTTTACCTTCTCCAGGCCAACCTCGGGGTGTGGT...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCCCTCAGGAGAGGTATTaGAAAGTCCTTAAGAATAAC +
Preference number: 2 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALPQERY*KVLKNN
Trigger: GTTATTCTTAAGGACTTTCCAATACCTCTCCTGAGG...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTTCTTTAATCACCAGGTaGCATCTTAGTCGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLSLITR*HLSRVK
Trigger: CTTCACACGACTAAGATGCCACCTGGTGATTAAAGA...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCCCAGATGACCTCACCTaGGTTGTGAGCCCCTCATTT +
Preference number: 2 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIPDDLT*VVSPSF
Trigger: AAATGAGGGGCTCACAACCCAGGTGAGGTCATCTGG...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTCAAGGCTGCTTTCTCTaGGATGGGGCTGAGTGGCAC +
Preference number: 2 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCQGCFL*DGAEWH
Trigger: GTGCCACTCAGCCCCATCCCAGAGAAAGCAGCCTTG...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTTACCTGGAGGCCTGCTaGCCATTTTCTATTGTGATT +
Preference number: 2 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVYLEAC*PFSIVI
Trigger: AATCACAATAGAAAATGGCCAGCAGGCCTCCAGGTA...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTGACTTGGCAGTCCACTaGAGAAGGAACACAGGCCAA +
Preference number: 2 (lower is better)
Translates to: QASDALKMFIRTRFPLHCDLAVH*RRNTGQ
Trigger: TTGGCCTGTGTTCCTTCTCCAGTGGACTGCCAAGTC...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CAA 90 bp AAGAACCAGATTTCCACTTCACTGTGGATTTCCTTGGTGTGGGGTTaGCCTATTCCATCTTTAGCACCCCAGTTCTTATTCTATGTCTCT +
Preference number: 2 (lower is better)
Translates to: KNQISTSLWISLVWG*PIPSLAPQFLFYVS
Trigger: AGAGACATAGAATAAGAACTGGGGTGCTAAAGATGGAATAGGCAAACCCCACACCAAGGAAATCCACAGTGAAGTGGAAATCTGGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTGTAAAGGTGGTATCATaGGAACCTGAAGAGATGAGA +
Preference number: 2 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVVKVVS*EPEEMR
Trigger: TCTCATCTCTTCAGGTTCTCATGATACCACCTTTAC...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCGAGGCTCTGGCCCATaGTTTTTCATGCAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: QASDALKMFIRTRFPLHCRGSGP*FFMQFL
Trigger: CAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCAAGGAAAGAAAGACCTaGCTTCCTCCCAGAGAGAGC +
Preference number: 2 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIKERKT*LPPRES
Trigger: GCTCTCTCTGGGAGGAAGTCAGGTCTTTCTTTCCTT...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATGTAATCCAGTTTCATTaGTTGCAGCCGTCCAAAGGA +
Preference number: 2 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNVIQFH*LQPSKG
Trigger: TCCTTTGGACGGCTGCAATCAATGAAACTGGATTAC...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTTGTCCGGTAGCTGTTTaGGTGTCTGCAGAAGCCCCA +
Preference number: 2 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCCPVAV*VSAEAP
Trigger: TGGGGCTTCTGCAGACACTCAAACAGCTACCGGACA...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCTTCCAACTTTCCGACTaGAGTGCTGATCGTTGGGCT +
Preference number: 2 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIFQLSD*SADRWA
Trigger: AGCCCAACGATCAGCACTTCAGTCGGAAAGTTGGAA...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTGGTACATCACACCCCTaGTGGCAGGAAGAAACGGTG +
Preference number: 2 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCGTSHP*WQEETV
Trigger: CACCGTTTCTTCCTGCCAGCAGGGGTGTGATGTACC...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAAAGAGTCAAAGCAAATaGACTCAAACGTGTTGTCAC +
Preference number: 2 (lower is better)
Translates to: FDIPVWASLLINGVVSYRKSQSK*TQTCCH
Trigger: GTGACAACACGTTTGAGTGCATTTGCTTTGACTCTT...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCTTGAACCTGACTTCCTaGTTCCTTCCAGGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: VTERRNFPDRSKPNGTMILNLTS*FLPGLC
Trigger: ACAGAGCCCTGGAAGGAAGCAGGAAGTCAGGTTCAA...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTTGTAAGGGAGAGGATTaGAAACGCTCAAATAGAAAG +
Preference number: 2 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLCKGED*KRSNRK
Trigger: CTTTCTATTTGAGCGTTTGCAATCCTCTCCCTTACA...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATTCATACAAGTTGCCATaGCTTGGGTCTTTCACCTCA +
Preference number: 2 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNSYKLP*LGSFTS
Trigger: TGAGGTGAAAGACCCAAGGCATGGCAACTTGTATGA...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCAGTCATCATGCTCGTTaGTCTTCATGGGACAGGCTG +
Preference number: 2 (lower is better)
Translates to: VTERRNFPDRSKPNGTMISHHAR*SSWDRL
Trigger: CAGCCTGTCCCATGAAGAGCAACGAGCATGATGACT...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATAGTGGAAGTCTTATTTaGTTGGAGGTGCTTGGCTGT +
Preference number: 2 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNSGSLI*LEVLGC
Trigger: ACAGCCAAGCACCTCCAACCAAATAAGACTTCCACT...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAGCTTTATTGACTCACTaGACTCTAAACTCCATGTTC +
Preference number: 2 (lower is better)
Translates to: FDIPVWASLLINGVVSYRALLTH*TLNSMF
Trigger: GAACATGGAGTTTAGAGTCCAGTGAGTCAATAAAGC...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTCATGTGTCAAGGTCATaGAGGTTACAGAAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVHVSRS*RLQKGE
Trigger: TTCTCCTTTCTGTAACCTCCATGACCTTGACACATG...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CAA 90 bp ACACACACACACACAAACACACAAATCAATCTTTGGGCAGGTTGTTaGAATTCACCAGCCGGCAAAAATACTGACAAATGTGCTCTGTAC +
Preference number: 2 (lower is better)
Translates to: THTHTNTQINLWAGC*NSPAGKNTDKCALY
Trigger: GTACAGAGCACATTTGTCAGTATTTTTGCCGGCTGGTGAATTCAAACAACCTGCCCAAAGATTGATTTGTGTGTTTGTGTGTGTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTAAAATTCATTTTCTCTaGCACCTCAACTCCACTCAC +
Preference number: 2 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVKIHFL*HLNSTH
Trigger: GTGAGTGGAGTTGAGGTGTCAGAGAAAATGAATTTT...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATGTAAAGGTGGTATCATaGGAACCTGAAGAGATGAGA +
Preference number: 2 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNVKVVS*EPEEMR
Trigger: TCTCATCTCTTCAGGTTCTCATGATACCACCTTTAC...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp TTGCCTACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGGTCCGAGATTTCAACTaGAGGGAGTTAGTTGAAAAT +
Preference number: 2 (lower is better)
Translates to: LPTVKCLVLTRIAQSTVKVRDFN*RELVEN
Trigger: ATTTTCAACTAACTCCCTTCAGTTGAAATCTCGGAC...CTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475834.2
3UTR-3UTR GCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCGGCCGATCTGAGCCATaGCTTATTCCAATGACTGTA +
Preference number: 2 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIGRSEP*LIPMTV
Trigger: TACAGTCATTGGAATAAGGCATGGCTCAGATCGGCC...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTACTGGAGTAACTTCCTaGTTCCATGCAGGTAGCTCT +
Preference number: 2 (lower is better)
Translates to: QASDALKMFIRTRFPLHCTGVTS*FHAGSS
Trigger: AGAGCTACCTGCATGGAAGCAGGAAGTTACTCCAGT...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTATGTCTAGGAATTGCTaGCTACCTGGAGGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCMSRNC*LPGGLL
Trigger: CAGCAGGCCTCCAGGTAGGCAGCAATTCCTAGACAT...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCAGCACTGATTTACCCTaGGCCATACTAGGGATCAAC +
Preference number: 2 (lower is better)
Translates to: VTERRNFPDRSKPNGTMISTDLP*AILGIN
Trigger: GTTGATCCCTAGTATGGCCCAGGGTAAATCAGTGCT...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677704.1
3UTR-3UTR GCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATGACAATCCATACCTATaGCAACGGGATTTTCTAGTT +
Preference number: 2 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNDNPYL*QRDFLV
Trigger: AACTAGAAAATCCCGTTGGCATAGGTATGGATTGTC...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGAATTCCGACTGGCCTTaGTGGCTTCCAATTCTTGAG +
Preference number: 2 (lower is better)
Translates to: KGMENRMLSLRSLFITLENSDWP*WLPILE
Trigger: CTCAAGAATTGGAAGCCAGCAAGGCCAGTCGGAATT...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR GCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTACCTGGCAGTCATCATaGTCGTTGCTCTTCATGGGA +
Preference number: 2 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCTWQSS*SLLFMG
Trigger: TCCCATGAAGAGCAACGAGCATGATGACTGCCAGGT...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CCA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTGCTTTATTGACTCACTaGACTCTAAACTCCATGTTC +
Preference number: 2 (lower is better)
Translates to: ITTSAMNKGRQVNNRASIALLTH*TLNSMF
Trigger: GAACATGGAGTTTAGAGTCCAGTGAGTCAATAAAGC...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR TCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTAGCCGGCAAAAATACTaGCAAATGTGCTCTGTACGC +
Preference number: 2 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCSRQKY*QMCSVR
Trigger: GCGTACAGAGCACATTTGTCAGTATTTTTGCCGGCT...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTTTCATGTTGCATAGCTaGACCTCTGCACCCTTTCAC +
Preference number: 2 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCFMLHS*TSAPFH
Trigger: GTGAAAGGGTGCAGAGGTTCAGCTATGCAACATGAA...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTTCCAAGTTCTGGGCTTaGTTCTGCCTTACCTATCCA +
Preference number: 2 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCSKFWA*FCLTYP
Trigger: TGGATAGGTAAGGCAGAAGCAAGCCCAGAACTTGGA...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGGTAAAGGTGGTATCATaGGAACCTGAAGAGATGAGA +
Preference number: 2 (lower is better)
Translates to: KGMENRMLSLRSLFITLEVKVVS*EPEEMR
Trigger: TCTCATCTCTTCAGGTTCTCATGATACCACCTTTAC...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATGTAAGTCACACACTGTaGAAATTAAGGCTTCTTATA +
Preference number: 2 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNVSHTL*KLRLLI
Trigger: TATAAGAAGCCTTAATTTGCACAGTGTGTGACTTAC...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR GCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCAGGATTTCCTTCTTCTaGAAGACTTGGTATTCCACT +
Preference number: 2 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIRISFF*KTWYST
Trigger: AGTGGAATACCAAGTCTTGCAGAAGAAGGAAATCCT...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CAA 90 bp CAGGGAAAAAGAGTTCTTTGTCCTGTAAGTTCTAATGTCTATATGTaGTCTCCTGTCTGTATGTCTATATGTTCCTTCCTGAGGAATCAT +
Preference number: 2 (lower is better)
Translates to: QGKRVLCPVSSNVYM*SPVCMSICSFLRNH
Trigger: ATGATTCCTCAGGAAGGAACATATAGACATACAGACAGGAGACAACATATAGACATTAGAACTTACAGGACAAAGAACTCTTTTTCCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTGTGGCTGACAAATATTaGTGTAGAAATCAGGGTTGG +
Preference number: 2 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCVADKY*CRNQGW
Trigger: CCAACCCTGATTTCTACATCAATATTTGTCAGCCAC...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR GCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGGCCCATGATTTTTCATaGAGTTTCTGTAAGTCACAC +
Preference number: 2 (lower is better)
Translates to: KGMENRMLSLRSLFITLEAHDFS*SFCKSH
Trigger: GTGTGACTTACAGAAACTGCATGAAAAATCATGGGC...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGGCTTTATTGACTCACTaGACTCTAAACTCCATGTTC +
Preference number: 2 (lower is better)
Translates to: KGMENRMLSLRSLFITLEALLTH*TLNSMF
Trigger: GAACATGGAGTTTAGAGTCCAGTGAGTCAATAAAGC...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTAGAAGCATCATCGAGTaGAAGTCTTATTTGGTTGGA +
Preference number: 2 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCRSIIE*KSYLVG
Trigger: TCCAACCAAATAAGACTTCCACTCGATGATGCTTCT...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR TCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTGTTTCCCTCAAACACTaGGCATCAAAACAACATTAT +
Preference number: 2 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCVSLKH*ASKQHY
Trigger: ATAATGTTGTTTTGATGCTCAGTGTTTGAGGGAAAC...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 72 bp CGCCCGGCCTCCCTCCTCCTCCACGCCATGCCCGCCTaGCCTCCCTCCTCCTCCGCGCTGTACCCGCCCAGC +
Preference number: 3 (lower is better)
Translates to: RPASLLLHAMPA*PPSSSALYPPS
Trigger: GCTGGGCGGGTACAGCGCGGAGGAGGAGGGAGGCCAGGCGGGCATGGCGTGGAGGAGGAGGGAGGCCGGGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 72 bp GCTGTGACCGCCCGGCCTCCCTCCTCCTCCACGCCATaGCCGCCTGGCCTCCCTCCTCCTCCGCGCTGTACC +
Preference number: 3 (lower is better)
Translates to: AVTARPPSSSTP*PPGLPPPPRCT
Trigger: GGTACAGCGCGGAGGAGGAGGGAGGCCAGGCGGGCATGGCGTGGAGGAGGAGGGAGGCCGGGCGGTCACAGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 72 bp CAGGCTGAGCACCGCGCCGACTGCCTGGCTCCGTTCTaGCAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGG +
Preference number: 3 (lower is better)
Translates to: QAEHRADCLAPF*QPLVHLPVVPG
Trigger: CCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGTCGGCGCGGTGCTCAGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 72 bp AGAACACCAGCAGCGCCTCCCTCCTCCTCCATGCTGTaGCCGCCCGGCCTCCCTCCTCCTCCACGCCATGCC +
Preference number: 3 (lower is better)
Translates to: RTPAAPPSSSML*PPGLPPPPRHA
Trigger: GGCATGGCGTGGAGGAGGAGGGAGGCCGGGCGGTCACAGCATGGAGGAGGAGGGAGGCGCTGCTGGTGTTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 72 bp GTTCACGGGCTTGGAGCCACCCAGCAGACACGCGGCTaGTTCTGGAGGGCACGGCTCAGTGCCAGCCTGCGG +
Preference number: 3 (lower is better)
Translates to: VHGLGATQQTRG*FWRARLSASLR
Trigger: CCGCAGGCTGGCACTGAGCCGTGCCCTCCAGAAGCAGCCGCGTGTCTGCTGGGTGGCTCCAAGCCCGTGAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 72 bp GCCACCAGCAGCAGGCTGAGCACCGCGCCGACTGCCTaGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCG +
Preference number: 3 (lower is better)
Translates to: ATSSRLSTAPTA*LRSDSPLCICP
Trigger: CGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGTCGGCGCGGTGCTCAGCCTGCTGCTGGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 72 bp GCGCCGACTGCCTGGCTCCGTTCTGACAGCCCCTTGTaGATCTGCCCGTCGTCCCCGGGATTCTCGCTGTCA +
Preference number: 3 (lower is better)
Translates to: APTAWLRSDSPL*ICPSSPGFSLS
Trigger: TGACAGCGAGAATCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGTCGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 72 bp GAGGTCCGTCCCTTACCCTGCCGAGGTTCACGGGCTTaGAGCCACCCAGCAGACACGCGGCTGCTTCTGGAG +
Preference number: 3 (lower is better)
Translates to: EVRPLPCRGSRA*SHPADTRLLLE
Trigger: CTCCAGAAGCAGCCGCGTGTCTGCTGGGTGGCTCCAAGCCCGTGAACCTCGGCAGGGTAAGGGACGGACCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 72 bp GGAGGTGCTTGGCTGTCCCGCGGCTCCGTGCTCCCCTaGAGGCACTGCGGAGTCAGATGTGTAAGAGGTCCT +
Preference number: 3 (lower is better)
Translates to: GGAWLSRGSVLP*RHCGVRCVRGP
Trigger: AGGACCTCTTACACATCTGACTCCGCAGTGCCTGCAGGGGAGCACGGAGCCGCGGGACAGCCAAGCACCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 72 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTaGCCGTCGTCCCCGGGATTCTCGCTGTCAAAGCCC +
Preference number: 3 (lower is better)
Translates to: TAWLRSDSPLCI*PSSPGFSLSKP
Trigger: GGGCTTTGACAGCGAGAATCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 72 bp ACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTaGGTGGGAGCTCTCTGCCCCAGCTCCCCTGCCCGA +
Preference number: 3 (lower is better)
Translates to: TLLKGIALCVSH*VGALCPSSPAR
Trigger: TCGGGCAGGGGAGCTGGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACATTTGGTTGGAGGTGCTaGGCTGTCCCGCGGCTCCGT +
Preference number: 3 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTFGWRC*AVPRLR
Trigger: ACGGAGCCGCGGGACAGCCAAGCACCTCCAACCAAA...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGCAAGGGGACCCATCCTaGTACACCAGCTGCAGGACC +
Preference number: 3 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMQGDPS*YTSCRT
Trigger: GGTCCTGCAGCTGGTGTACAAGGATGGGTCCCCTTG...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 72 bp GGGTGGGAGCTCTCTGCCCCAGCTCCCCTGCCCGAGTaGACTTTCACCTCTGGGATGGTCAGAACCTCATCC +
Preference number: 3 (lower is better)
Translates to: GWELSAPAPLPE*TFTSGMVRTSS
Trigger: GGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTGGGGCAGAGAGCTCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 72 bp CCCCTGACCAGCCCCACCCTATCGTCCTCACGCTCCTaGAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGG +
Preference number: 3 (lower is better)
Translates to: PLTSPTLSSSRS*RALLCAFLTGW
Trigger: CCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTGAGGACGATAGGGTGGGGCTGGTCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 72 bp TGCAGGCCGACCCATTCACGTATTCCAGAAGGAGGCTaGCGCTGTCCTCAACCACCGGGCCGGTCTTTGCCA +
Preference number: 3 (lower is better)
Translates to: CRPTHSRIPEGG*RCPQPPGRSLP
Trigger: TGGCAAAGACCGGCCCGGTGGTTGAGGACAGCGGCAGCCTCCTTCTGGAATACGTGAATGGGTCGGCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR GCA 72 bp CCTTACAGCCTCCTTGTTCTGGCCCGACTGCAAAGGTaGACACCCCAACGCTGTAGGTGCGCGAGTCGCGAG +
Preference number: 3 (lower is better)
Translates to: PYSLLVLARLQR*TPQRCRCASRE
Trigger: CTCGCGACTCGCGCACCTACAGCGTTGGGGTGTGCACCTTTGCAGTCGGGCCAGAACAAGGAGGCTGTAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGTTTGGTTGGAGGTGCTaGGCTGTCCCGCGGCTCCGT +
Preference number: 3 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEFGWRC*AVPRLR
Trigger: ACGGAGCCGCGGGACAGCCAAGCACCTCCAACCAAA...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGGCATGGGCCTATTGGTaGGCCTGGCCTCAGGCCTGC +
Preference number: 3 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRAWAYW*AWPQAC
Trigger: GCAGGCCTGAGGCCAGGCCAACCAATAGGCCCATGC...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 72 bp ACGAGACTCCGTTGTGGACGAGGGACCAGGACCCGGTaGGAGAGGAGAGCAGCCGCAGGTCGTAGGTTTTGT +
Preference number: 3 (lower is better)
Translates to: TRLRCGRGTRTR*ERRAAAGRRFC
Trigger: ACAAAACCTACGACCTGCGGCTGCTCTCCTCTCTCACCGGGTCCTGGTCCCTCGTCCACAACGGAGTCTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 72 bp CTCGCTGTCAAAGCCCACCCCCAGAGGACACACGGCTaGGGTGTACCAAGAGAAGAGGTACTGGCAGTCGGC +
Preference number: 3 (lower is better)
Translates to: LAVKAHPQRTHG*GVPREEVLAVG
Trigger: GCCGACTGCCAGTACCTCTTCTCTTGGTACACCTCAGCCGTGTGTCCTCTGGGGGTGGGCTTTGACAGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 72 bp TTATGCCATCTCTCCACTGAGGTCCGTCCCTTACCCTaGCGAGGTTCACGGGCTTGGAGCCACCCAGCAGAC +
Preference number: 3 (lower is better)
Translates to: LCHLSTEVRPLP*RGSRAWSHPAD
Trigger: GTCTGCTGGGTGGCTCCAAGCCCGTGAACCTCGGCAGGGTAAGGGACGGACCTCAGTGGAGAGATGGCATAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 72 bp TCCTCCGTCCTTACAGCCTCCTTGTTCTGGCCCGACTaGAAAGGTGCACACCCCAACGCTGTAGGTGCGCGA +
Preference number: 3 (lower is better)
Translates to: SSVLTASLFWPD*KGAHPNAVGAR
Trigger: TCGCGCACCTACAGCGTTGGGGTGTGCACCTTTGCAGTCGGGCCAGAACAAGGAGGCTGTAAGGACGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 72 bp GCCCCACCCTATCGTCCTCACGCTCCTGAAGGGCATTaGTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTG +
Preference number: 3 (lower is better)
Translates to: APPYRPHAPEGH*SVRFSLGGSSL
Trigger: CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTGAGGACGATAGGGTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 72 bp CCCTGGAGCAGACGAGATGGATCCTCGTGGTATATGTaGTCTGTCTGCCATCGCTGGTGGTGCAGGCCGACC +
Preference number: 3 (lower is better)
Translates to: PWSRRDGSSWYM*SVCHRWWCRPT
Trigger: GGTCGGCCTGCACCACCAGCGATGGCAGACAGACCACATATACCACGAGGATCCATCTCGTCTGCTCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGTTTGGTTGGAGGTGCTaGGCTGTCCCGCGGCTCCGT +
Preference number: 3 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQFGWRC*AVPRLR
Trigger: ACGGAGCCGCGGGACAGCCAAGCACCTCCAACCAAA...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTGGCTATCTTGCCGCCTaGCACACAAGCTCACCTGCA +
Preference number: 3 (lower is better)
Translates to: QREPRRQSEASQLSTATAGYLAA*HTSSPA
Trigger: TGCAGGTGAGCTTGTGTGCAAGGCGGCAAGATAGCC...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTACCCACCATCACTTCTaGGTTGTCACCGAGGCCAGC +
Preference number: 3 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPTHHHF*VVTEAS
Trigger: GCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGT...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GCTGATCGTTGGGCTTCACCTGGCATATGTTGGCTCCAGAGCACGCCGGGTTTCAGCCAGGTCGGTGACTaGGCAGTCCACTGGAGAAGG +
Preference number: 3 (lower is better)
Translates to: ADRWASPGICWLQSTPGFSQVGD*AVHWRR
Trigger: CCTTCTCCAGTGGACTGCCAAGTCACCGACCTGGCT...GAAACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGATCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTCTCACGATGGTGTCGTaGAGGCCCAGGGGCTTCAGG +
Preference number: 3 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLLTMVS*RPRGFR
Trigger: CCTGAAGCCCCTGGGCCTCAACGACACCATCGTGAG...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTCCGAGGTTCACGGGCTaGGAGCCACCCAGCAGACAC +
Preference number: 3 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPPRFTG*EPPSRH
Trigger: GTGTCTGCTGGGTGGCTCCAAGCCCGTGAACCTCGG...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGGGGCCTGGAGTTCACTaGGCTCTCGCTGCAGGTGAA +
Preference number: 3 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLGPGVH*ALAAGE
Trigger: TTCACCTGCAGCGAGAGCCAAGTGAACTCCAGGCCC...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACGTCCTTACAGCCTCCTaGTTCTGGCCCGACTGCAAA +
Preference number: 3 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDVLTAS*FWPDCK
Trigger: TTTGCAGTCGGGCCAGAACAAGGAGGCTGTAAGGAC...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGTTCACCTGGCATATGTaGGCTCCAGAGCACGCCGGG +
Preference number: 3 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLFTWHM*APEHAG
Trigger: CCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAA...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 72 bp CGTCCCAGTGATGGCTTCCCAGTTGTCACTGTACCTTaGCAGGGACGAGAGGTCGAAGGAGTTGCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: RPSDGFPVVTVP*QGREVEGVASP
Trigger: GGGGCTGGCAACTCCTTCGACCTCTCGTCCCTGTCAAGGTACAGTGACAACTGGGAAGCCATCACTGGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR GCA 72 bp GAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTaGCAGGAGAAGAAGAGAGTGCATGTCTGCTTGTCC +
Preference number: 3 (lower is better)
Translates to: EHSVACSQASGV*QEKKRVHVCLS
Trigger: GGACAAGCAGACATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 72 bp ATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTaGCCCAGCTCCCCTGCCCGAGTGAACTTTCACCTC +
Preference number: 3 (lower is better)
Translates to: IALCVSHWVGAL*PSSPARVNFHL
Trigger: GAGGTGAAAGTTCACTCGGGCAGGGGAGCTGGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 72 bp GTTCACGGGCTTGGAGCCACCCAGCAGACACGCGGCTaGTTCTGGAGGGCACGGCTCATGGCTATTATTTCT +
Preference number: 3 (lower is better)
Translates to: VHGLGATQQTRG*FWRARLMAIIS
Trigger: AGAAATAATAGCCATGAGCCGTGCCCTCCAGAAGCAGCCGCGTGTCTGCTGGGTGGCTCCAAGCCCGTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677704.1
3UTR CCA 72 bp TCAGCCTGCCCCTGGAGCAGACGAGATGGATCCTCGTaGTATATGTGGTCTGTCTGCCATCGCTGGTGGTGC +
Preference number: 3 (lower is better)
Translates to: SACPWSRRDGSS*YMWSVCHRWWC
Trigger: GCACCACCAGCGATGGCAGACAGACCACATATACCACGAGGATCCATCTCGTCTGCTCCAGGGGCAGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 72 bp CAAGGGGACCCATCCTTGTACACCAGCTGCAGGACCTaGTCCACGTATCTCAGCCTCTTGTTGGCCTTGCCC +
Preference number: 3 (lower is better)
Translates to: QGDPSLYTSCRT*STYLSLLLALP
Trigger: GGGCAAGGCCAACAAGAGGCTGAGATACGTGGACCAGGTCCTGCAGCTGGTGTACAAGGATGGGTCCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp GCTGATCGTTGGGCTTCACCTGGCATATGTTGGCTCCAGAGCACGCCGGGTTTCCACCACGACTGCCCGTaGACCCCATTCTCACAGAAC +
Preference number: 3 (lower is better)
Translates to: ADRWASPGICWLQSTPGFHHDCP*TPFSQN
Trigger: GTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTG...GAAACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCGGTCTGTATCCGTCGTaGTCTGAATGGGACAGGCAG +
Preference number: 3 (lower is better)
Translates to: LLKGIALCVSHWVGALCPGLYPS*SEWDRQ
Trigger: CTGCCTGTCCCATTCAGACAACGACGGATACAGACC...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTCCATCAATAGGAACTTaGCACACAGCGGCTCCGGCA +
Preference number: 3 (lower is better)
Translates to: QREPRRQSEASQLSTATAPSIGT*HTAAPA
Trigger: TGCCGGAGCCGCTGTGTGCAAAGTTCCTATTGATGG...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTCCAAAGGATGCCCCCTaGGTGCCTGAGAGCAGACAG +
Preference number: 3 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLPKDAP*VPESRQ
Trigger: CTGTCTGCTCTCAGGCACCAAGGGGGCATCCTTTGG...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGCCAAAGGATGCCCCCTaGGTGCCTGAGAGCAGACAG +
Preference number: 3 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQPKDAP*VPESRQ
Trigger: CTGTCTGCTCTCAGGCACCAAGGGGGCATCCTTTGG...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGTTCACCTGGCATATGTaGGCTCCAGAGCACGCCGGG +
Preference number: 3 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRFTWHM*APEHAG
Trigger: CCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAA...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTATGCAGCCCTCTGTTTaGAGATGCGTCCGGCCTTAT +
Preference number: 3 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCMQPSV*RCVRPY
Trigger: ATAAGGCCGGACGCATCTCAAAACAGAGGGCTGCAT...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGTCACTGTGGATTTCCTaGGTGTGGGGTTTGCCTATT +
Preference number: 3 (lower is better)
Translates to: RSLARRPAACARRRRECMSLWIS*VWGLPI
Trigger: AATAGGCAAACCCCACACCAAGGAAATCCACAGTGA...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGGAGACCACCTTGGACTaGTCACTTGTGGGGCAGACG +
Preference number: 3 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRETTLD*SLVGQT
Trigger: CGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTC...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTAGCCTCTTGTTGGCCTaGCCCACGCTAATCCTGGTC +
Preference number: 3 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPSLLLA*PTLILV
Trigger: GACCAGGATTAGCGTGGGCAAGGCCAACAAGAGGCT...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAGGAACATTCGGTCGCTaGCTCGCAGGCCAGCGGCGT +
Preference number: 3 (lower is better)
Translates to: PEVEEVEEGADASGVTFTGTFGR*LAGQRR
Trigger: ACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTCC...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 72 bp GAGGCTTCACGGCGCAGGCAGCCCGGGAGTCCCAGCTaGAGTAGTAAGTGCAGCTGTCGATATCAAACCTCT +
Preference number: 3 (lower is better)
Translates to: EASRRRQPGSPS*SSKCSCRYQTS
Trigger: AGAGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCCTGCGCCGTGAAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 72 bp AAGCATCATCGAGTGGAAGTCTTATTTGGTTGGAGGTaGTTGGCTGTCCCGCGGCTCCGTGCTCCCCTGCAG +
Preference number: 3 (lower is better)
Translates to: KHHRVEVLFGWR*LAVPRLRAPLQ
Trigger: CTGCAGGGGAGCACGGAGCCGCGGGACAGCCAAGCACCTCCAACCAAATAAGACTTCCACTCGATGATGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 72 bp AGGCACTCGGGGACCCTGTGCACGTATGTGTGTGTGTaGTCGCACGCACGTGTGTGTGCCCTTAAGAAACAG +
Preference number: 3 (lower is better)
Translates to: RHSGTLCTYVCV*SHARVCALKKQ
Trigger: CTGTTTCTTAAGGGCACACACACGTGCGTGCGAGCACACACACACATACGTGCACAGGGTCCCCGAGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 72 bp TCCAGCTTACCAAGGGGATGGGCAGGTCCCTGCATATaGCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTA +
Preference number: 3 (lower is better)
Translates to: SSLPRGWAGPCI*PSLQRGLPMVL
Trigger: TAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGGCATATGCAGGGACCTGCCCATCCCCTTGGTAAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 72 bp ACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTaGTTTCTCTGGGATGGGGCTGAGTGGCACCAGATG +
Preference number: 3 (lower is better)
Translates to: TSWLSPRPASQG*FLWDGAEWHQM
Trigger: CATCTGGTGCCACTCAGCCCCATCCCAGAGAAAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 72 bp GTTCCAAGTCTTCTCATCACAGAACCAGGCCCGGGCTaGAGACCACAGGAACCCACACAAGGTCTCCAACGG +
Preference number: 3 (lower is better)
Translates to: VPSLLITEPGPG*RPQEPTQGLQR
Trigger: CCGTTGGAGACCTTGTGTGGGTTCCTGTGGTCTGCAGCCCGGGCCTGGTTCTGTGATGAGAAGACTTGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR GCA 72 bp CCACCTTCAGATTTTGCCAGACTGGAGAGGTCGTACTaGTCCAGCGTGGAGGGGTCGGTCACTACGCATTCC +
Preference number: 3 (lower is better)
Translates to: PPSDFARLERSY*SSVEGSVTTHS
Trigger: GGAATGCGTAGTGACCGACCCCTCCACGCTGGAGCAGTACGACCTCTCCAGTCTGGCAAAATCTGAAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR GCA 72 bp GGACACCAGCTTGGTGGAGCTCACTGTCTTCTGCTGTaGAGAGCTGGACTTCCCTTTCCTCGCCTTCTCACC +
Preference number: 3 (lower is better)
Translates to: GHQLGGAHCLLL*RAGLPFPRLLT
Trigger: GGTGAGAAGGCGAGGAAAGGGAAGTCCAGCTCTGCACAGCAGAAGACAGTGAGCTCCACCAAGCTGGTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 72 bp CCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTaGCTATCTTGCCGCCTTGCACACAAGCTCACCTGC +
Preference number: 3 (lower is better)
Translates to: PTPPGHTVPNSM*LSCRLAHKLTC
Trigger: GCAGGTGAGCTTGTGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 72 bp GTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTaGGAGCCTCTGGAAAACAACAGAACCTCGCCACAG +
Preference number: 3 (lower is better)
Translates to: VVSYRPPTQHAP*EPLENNRTSPQ
Trigger: CTGTGGCGAGGTTCTGTTGTTTTCCAGAGGCTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 72 bp CTACGCATTCCAGGGGCTCCTCCGGGCAGGCATAGCTaGTGTACCACCGGAAGTTGTAGGTGGAGTTATCCT +
Preference number: 3 (lower is better)
Translates to: LRIPGAPPGRHS*CTTGSCRWSYP
Trigger: AGGATAACTCCACCTACAACTTCCGGTGGTACACCAGCTATGCCTGCCCGGAGGAGCCCCTGGAATGCGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 72 bp CTGCTTGTCCAGGGAGATGAGCATGGGCCTATTGGTTaGCCTGGCCTCAGGCCTGCACACGAAACTGATCAC +
Preference number: 3 (lower is better)
Translates to: LLVQGDEHGPIG*PGLRPAHETDH
Trigger: GTGATCAGTTTCGTGTGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCATGCTCATCTCCCTGGACAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 72 bp CAGACAGACTCCTCCGTCCTTACAGCCTCCTTGTTCTaGCCCGACTGCAAAGGTGCACACCCCAACGCTGTA +
Preference number: 3 (lower is better)
Translates to: QTDSSVLTASLF*PDCKGAHPNAV
Trigger: TACAGCGTTGGGGTGTGCACCTTTGCAGTCGGGCCAGAACAAGGAGGCTGTAAGGACGGAGGAGTCTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 72 bp CAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATaGTCAGAACCTCATCCTCACTGTCCTGGTCATCCC +
Preference number: 3 (lower is better)
Translates to: QLPCPSELSPLG*SEPHPHCPGHP
Trigger: GGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTCCAAGGGAAGGCAGATaGGACCCAAAGTTAACACCT +
Preference number: 3 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCPREGR*DPKLTP
Trigger: AGGTGTTAACTTTGGGTCCAATCTGCCTTCCCTTGG...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTCCAAGGGAAGGCAGATaGGACCCAAAGTTAACACCT +
Preference number: 3 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPPREGR*DPKLTP
Trigger: AGGTGTTAACTTTGGGTCCAATCTGCCTTCCCTTGG...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACAGACAACATGCCTTTTaGCCATCCAGCTTACCAAGG +
Preference number: 3 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDRQHAF*PSSLPR
Trigger: CCTTGGTAAGCTGGATGGCAAAAAGGCATGTTGTCT...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCTCCTTGGTGTGGGGTTaGCCTATTCCATCTTTAGCA +
Preference number: 3 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVSLVWG*PIPSLA
Trigger: TGCTAAAGATGGAATAGGCAAACCCCACACCAAGGA...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGCAACCTCCCATCTGGTaGCTGAAGCGTCTCCATCTC +
Preference number: 3 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQQPPIW*LKRLHL
Trigger: GAGATGGAGACGCTTCAGCAACCAGATGGGAGGTTG...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTCAACCTCCCATCTGGTaGCTGAAGCGTCTCCATCTC +
Preference number: 3 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLQPPIW*LKRLHL
Trigger: GAGATGGAGACGCTTCAGCAACCAGATGGGAGGTTG...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGACCATCACTTCTTGGTaGTCACCGAGGCCAGCATCC +
Preference number: 3 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQTITSW*SPRPAS
Trigger: GGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGT...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTACCCACCATCACTTCTaGGTTGTCACCGAGGCCAGC +
Preference number: 3 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSTHHHF*VVTEAS
Trigger: GCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGT...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGGTCACAAGTCCTTTCTaGAACCTGACTTCCTGCTTC +
Preference number: 3 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMVTSPF*NLTSCF
Trigger: GAAGCAGGAAGTCAGGTTCAAGAAAGGACTTGTGAC...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATGGTCAGAACCTCATCCTCATGAGGAGACCACCTaGGACTTGTCACTTGTGGGG +
Preference number: 3 (lower is better)
Translates to: QLPCPSELSPLGWSEPHPHEETT*DLSLVG
Trigger: CCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATG...AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACATGTCCTGTGCTTGGGTaGGTGACCTGGCAGTCATCA +
Preference number: 3 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTCPVLG*VTWQSS
Trigger: TGATGACTGCCAGGTCACCAACCCAAGCACAGGACA...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACGGAACATTCGGTCGCTaGCTCGCAGGCCAGCGGCGT +
Preference number: 3 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDGTFGR*LAGQRR
Trigger: ACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTCC...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGTGTCGTAGTCCGCAGTaGTGCTACACCACAGCTTCG +
Preference number: 3 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRCRSPQ*CYTTAS
Trigger: CGAAGCTGTGGTGTAGCACAACTGCGGACTACGACA...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCACTTCACTGAAGACTaGTGGCCTCCCAATGTCCTC +
Preference number: 3 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLHFTED*WPPNVL
Trigger: GAGGACATTGGGAGGCCACAAGTCTTCAGTGAAGTG...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTACGTGACAACAACTTaGTCACCTATGACACCCAGC +
Preference number: 3 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMYVTTT*SPMTPS
Trigger: GCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTA...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCATCGAGATCGCCGTCTaGAAGGTAGTACTTGGTCTT +
Preference number: 3 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVIEIAV*KVVLGL
Trigger: AAGACCAAGTACTACCTTCAAGACGGCGATCTCGAT...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 72 bp CTGGTCATCCCCATGCAGGGAGCTGAGGGCTTTCACTaGCTTGGTGGTAATATGGCCGTTCTCCTGCCCTTC +
Preference number: 3 (lower is better)
Translates to: LVIPMQGAEGFH*LGGNMAVLLPF
Trigger: GAAGGGCAGGAGAACGGCCATATTACCACCAAGTCAGTGAAAGCCCTCAGCTCCCTGCATGGGGATGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 72 bp TTGCCGCCTTGCACACAAGCTCACCTGCACCACGACTaGCCGTTGACCCCATTCTCACAGAACAATGTCCAG +
Preference number: 3 (lower is better)
Translates to: LPPCTQAHLHHD*PLTPFSQNNVQ
Trigger: CTGGACATTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTGCAAGGCGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 72 bp TACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTaGACACAAGCTCACCTGCACCACGACTGCCCGTTG +
Preference number: 3 (lower is better)
Translates to: YCPQLNVAILPP*TQAHLHHDCPL
Trigger: CAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 72 bp CCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTaGCGCCTTGCACACAAGCTCACCTGCACCACGACT +
Preference number: 3 (lower is better)
Translates to: PGHTVPNSMWLS*RLAHKLTCTTT
Trigger: AGTCGTGGTGCAGGTGAGCTTGTGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 72 bp CAACGGTGTGGTCTCATACAGACCACCCACCCAGCATaGTCCGTGGGAGCCTCTGGAAAACAACAGAACCTC +
Preference number: 3 (lower is better)
Translates to: QRCGLIQTTHPA*SVGASGKQQNL
Trigger: GAGGTTCTGTTGTTTTCCAGAGGCTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 72 bp GAGGCTGCCGCTGTCCTCAACCACCGGGCCGGTCTTTaGCATTCCCAAGTTACTGATGGAAACCACTTCAGT +
Preference number: 3 (lower is better)
Translates to: EAAAVLNHRAGL*HSQVTDGNHFS
Trigger: ACTGAAGTGGTTTCCATCAGTAACTTGGGAATGGCAAAGACCGGCCCGGTGGTTGAGGACAGCGGCAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR GCA 72 bp TCGTGGTATATGTGGTCTGTCTGCCATCGCTGGTGGTaGAGGCCGACCCATTCACGTATTCCAGAAGGAGGC +
Preference number: 3 (lower is better)
Translates to: SWYMWSVCHRWW*RPTHSRIPEGG
Trigger: GCCTCCTTCTGGAATACGTGAATGGGTCGGCCTGCACCACCAGCGATGGCAGACAGACCACATATACCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR GCA 72 bp AGACGAGATGGATCCTCGTGGTATATGTGGTCTGTCTaGCATCGCTGGTGGTGCAGGCCGACCCATTCACGT +
Preference number: 3 (lower is better)
Translates to: RRDGSSWYMWSV*HRWWCRPTHSR
Trigger: ACGTGAATGGGTCGGCCTGCACCACCAGCGATGGCAGACAGACCACATATACCACGAGGATCCATCTCGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR GCA 72 bp TGTCCTGTGCTTGGGTTGGTGACCTGGCAGTCATCATaGTCGTTGCTCTTCATGGGACAGGCTGTGGCTGTG +
Preference number: 3 (lower is better)
Translates to: CPVLGLVTWQSS*SLLFMGQAVAV
Trigger: CACAGCCACAGCCTGTCCCATGAAGAGCAACGAGCATGATGACTGCCAGGTCACCAACCCAAGCACAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 72 bp TGGAAGGACACCAGCTTGGTGGAGCTCACTGTCTTCTaGTGTGCAGAGCTGGACTTCCCTTTCCTCGCCTTC +
Preference number: 3 (lower is better)
Translates to: WKDTSLVELTVF*CAELDFPFLAF
Trigger: GAAGGCGAGGAAAGGGAAGTCCAGCTCTGCACAGCAGAAGACAGTGAGCTCCACCAAGCTGGTGTCCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 72 bp CCTGACATGAGGAGACCACCTTGGACTTGTCACTTGTaGGGCAGACGTCTGAGGAAAGCTTCCCACAGACCC +
Preference number: 3 (lower is better)
Translates to: PDMRRPPWTCHL*GRRLRKASHRP
Trigger: GGGTCTGTGGGAAGCTTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATGTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 72 bp CTGGCCGCTGGGTGCCGCGGTCACAGTAGAAGAAGATaGCTGTGGAGCGCTGATAAACCTTATGGCAAGTGT +
Preference number: 3 (lower is better)
Translates to: LAAGCRGHSRRR*LWSADKPYGKC
Trigger: ACACTTGCCATAAGGTTTATCAGCGCTCCACAGCCATCTTCTTCTACTGTGACCGCGGCACCCAGCGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 72 bp TGTGAACGAGTCCCAGGACCTGGACGTCACCAGTTGTaGTCCTTCTGCAAATGCTGGCCCTTTCAGAGCAGC +
Preference number: 3 (lower is better)
Translates to: CERVPGPGRHQL*SFCKCWPFQSS
Trigger: GCTGCTCTGAAAGGGCCAGCATTTGCAGAAGGACCACAACTGGTGACGTCCAGGTCCTGGGACTCGTTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 72 bp GGGCTTGGAGCCACCCAGCAGACACGCGGCTGCTTCTaGAGGGCACGGCTCATGGCTATTATTTCTATCTAT +
Preference number: 3 (lower is better)
Translates to: GLGATQQTRGCF*RARLMAIISIY
Trigger: ATAGATAGAAATAATAGCCATGAGCCGTGCCCTCCAGAAGCAGCCGCGTGTCTGCTGGGTGGCTCCAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677704.1
3UTR-3UTR CAA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAGGAAGTCTTATTTGGTaGGAGGTGCTTGGCTGTCCC +
Preference number: 3 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTGSLIW*EVLGCP
Trigger: GGGACAGCCAAGCACCTCCAACCAAATAAGACTTCC...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCATGCAGCCCTCTGTTTaGAGATGCGTCCGGCCTTAT +
Preference number: 3 (lower is better)
Translates to: PVWASLLINGVVSYRPPTMQPSV*RCVRPY
Trigger: ATAAGGCCGGACGCATCTCAAAACAGAGGGCTGCAT...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGCTTTGGGCAGGTTGTTaGAATTCACCAGCCGGCAAA +
Preference number: 3 (lower is better)
Translates to: LINGVVSYRPPTQHAPWELWAGC*NSPAGK
Trigger: TTTGCCGGCTGGTGAATTCAAACAACCTGCCCAAAG...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACTCCATGTTCATTGTTTaGATGAACAGGACCACACCC +
Preference number: 3 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDSMFIV*MNRTTP
Trigger: GGGTGTGGTCCTGTTCATCAAAACAATGAACATGGA...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTAGACAACATGCCTTTTaGCCATCCAGCTTACCAAGG +
Preference number: 3 (lower is better)
Translates to: QREPRRQSEASQLSTATARQHAF*PSSLPR
Trigger: CCTTGGTAAGCTGGATGGCAAAAAGGCATGTTGTCT...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTTCCTTGGTGTGGGGTTaGCCTATTCCATCTTTAGCA +
Preference number: 3 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCSLVWG*PIPSLA
Trigger: TGCTAAAGATGGAATAGGCAAACCCCACACCAAGGA...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGCATCAGTGCTTTAACTaGTACAATGGATCGGACCAG +
Preference number: 3 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMHQCFN*YNGSDQ
Trigger: CTGGTCCGATCCATTGTACAAGTTAAAGCACTGATG...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACACCCCATTCACTAGATaGTGTTTCCCTCAAACACTG +
Preference number: 3 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDTPFTR*CFPQTL
Trigger: CAGTGTTTGAGGGAAACACAATCTAGTGAATGGGGT...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGGCCTCTGTAGTTCAGTaGGATCATCCCATCATAATA +
Preference number: 3 (lower is better)
Translates to: RSLARRPAACARRRRECMASVVQ*DHPIII
Trigger: TATTATGATGGGATGATCCAACTGAACTACAGAGGC...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAGCCGATGCATATCGGTaGCAGCCCGGCACTGGATTC +
Preference number: 3 (lower is better)
Translates to: PEVEEVEEGADASGVTFTADAYR*QPGTGF
Trigger: GAATCCAGTGCCGGGCTGCAACCGATATGCATCGGC...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACTCCATTCGCCGCGGCTaGGGGACTCATCTGCACCAC +
Preference number: 3 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDSIRRG*GTHLHH
Trigger: GTGGTGCAGATGAGTCCCCAAGCCGCGGCGAATGGA...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTAGAGTGCATGTCTGCTaGTCCAGGGAGATGAGCATG +
Preference number: 3 (lower is better)
Translates to: APCDPIANRGKTCVPISARVHVC*SREMSM
Trigger: CATGCTCATCTCCCTGGACAAGCAGACATGCACTCT...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGAGAGTGCATGTCTGCTaGTCCAGGGAGATGAGCATG +
Preference number: 3 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQRVHVC*SREMSM
Trigger: CATGCTCATCTCCCTGGACAAGCAGACATGCACTCT...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGGTCCTTACAGCCTCCTaGTTCTGGCCCGACTGCAAA +
Preference number: 3 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLVLTAS*FWPDCK
Trigger: TTTGCAGTCGGGCCAGAACAAGGAGGCTGTAAGGAC...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCGTTCTGACAGCCCCTaGTGCATCTGCCCGTCGTCC +
Preference number: 3 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVRSDSP*CICPSS
Trigger: GGACGACGGGCAGATGCACAAGGGGCTGTCAGAACG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 72 bp GACCGCTTCATCCTGGTGCCTGTAATCCAGTTTCATTaGTTGCAGCCGTCCAAAGGATGCCCCCTTGGTGCC +
Preference number: 3 (lower is better)
Translates to: DRFILVPVIQFH*LQPSKGCPLGA
Trigger: GGCACCAAGGGGGCATCCTTTGGACGGCTGCAATCAATGAAACTGGATTACAGGCACCAGGATGAAGCGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 72 bp AACAAGCCAGCCAAACCGGTACAGGCTGAGGGATGCTaGAGGGCGGTTTGCTTCTCAGCAATAGAACACCAG +
Preference number: 3 (lower is better)
Translates to: NKPAKPVQAEGC*RAVCFSAIEHQ
Trigger: CTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTGTACCGGTTTGGCTGGCTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 72 bp TTGAGGCCCAGGGGCTTCAGGTCATACAAGTTGCCATaGCTTGGGTCTTTCACCTCACAGTTGTCCCCTTCC +
Preference number: 3 (lower is better)
Translates to: LRPRGFRSYKLP*LGSFTSQLSPS
Trigger: GGAAGGGGACAACTGTGAGGTGAAAGACCCAAGGCATGGCAACTTGTATGACCTGAAGCCCCTGGGCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 72 bp ACAGACCACCCACCCAGCATGCTCCGTGGGAGCCTCTaGAAAACAACAGAACCTCGCCACAGAAGGGAATTT +
Preference number: 3 (lower is better)
Translates to: TDHPPSMLRGSL*KTTEPRHRREF
Trigger: AAATTCCCTTCTGTGGCGAGGTTCTGTTGTTTTCCAGAGGCTCCCACGGAGCATGCTGGGTGGGTGGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 72 bp TCCTCGTGGTATATGTGGTCTGTCTGCCATCGCTGGTaGTGCAGGCCGACCCATTCACGTATTCCAGAAGGA +
Preference number: 3 (lower is better)
Translates to: SSWYMWSVCHRW*CRPTHSRIPEG
Trigger: TCCTTCTGGAATACGTGAATGGGTCGGCCTGCACCACCAGCGATGGCAGACAGACCACATATACCACGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 72 bp GGATCCTCGTGGTATATGTGGTCTGTCTGCCATCGCTaGTGGTGCAGGCCGACCCATTCACGTATTCCAGAA +
Preference number: 3 (lower is better)
Translates to: GSSWYMWSVCHR*WCRPTHSRIPE
Trigger: TTCTGGAATACGTGAATGGGTCGGCCTGCACCACCAGCGATGGCAGACAGACCACATATACCACGAGGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 72 bp CTCATTTCCAGCCAGGTCGGTGACTTGGCAGTCCACTaGAGAAGGAACACAGGCCAACGCGGTTTCAAACTC +
Preference number: 3 (lower is better)
Translates to: LISSQVGDLAVH*RRNTGQRGFKL
Trigger: GAGTTTGAAACCGCGTTGGCCTGTGTTCCTTCTCCAGTGGACTGCCAAGTCACCGACCTGGCTGGAAATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 72 bp GCCCAGGGGCTTCAGGTCATACAAGTTGCCATGCCTTaGGTCTTTCACCTCACAGTTGTCCCCTTCCACTCT +
Preference number: 3 (lower is better)
Translates to: AQGLQVIQVAMP*VFHLTVVPFHS
Trigger: AGAGTGGAAGGGGACAACTGTGAGGTGAAAGACCCAAGGCATGGCAACTTGTATGACCTGAAGCCCCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 72 bp GCGGTTCCCGCTTTTCCTGACATGAGGAGACCACCTTaGACTTGTCACTTGTGGGGCAGACGTCTGAGGAAA +
Preference number: 3 (lower is better)
Translates to: AVPAFPDMRRPP*TCHLWGRRLRK
Trigger: TTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATGTCAGGAAAAGCGGGAACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 72 bp GTTTCATTGATTGCAGCCGTCCAAAGGATGCCCCCTTaGTGCCTGAGAGCAGACAGACTCCTCCGTCCTTAC +
Preference number: 3 (lower is better)
Translates to: VSLIAAVQRMPP*CLRADRLLRPY
Trigger: GTAAGGACGGAGGAGTCTGTCTGCTCTCAGGCACCAAGGGGGCATCCTTTGGACGGCTGCAATCAATGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 72 bp CCTGGACGTCACCAGTTGTGGTCCTTCTGCAAATGCTaGCCCTTTCAGAGCAGCCCAGGGGCCCTTTATATA +
Preference number: 3 (lower is better)
Translates to: PGRHQLWSFCKC*PFQSSPGALYI
Trigger: TATATAAAGGGCCCCTGGGCTGCTCTGAAAGGGCCAGCATTTGCAGAAGGACCACAACTGGTGACGTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTTCTGTACGCCCAGGCTaGAAGATATCATGCAAAAAG +
Preference number: 3 (lower is better)
Translates to: QREPRRQSEASQLSTATASVRPG*KISCKK
Trigger: CTTTTTGCATGATATCTTCAAGCCTGGGCGTACAGA...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCAATCTTTGGGCAGGTaGTTTGAATTCACCAGCCGG +
Preference number: 3 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRQSLGR*FEFTSR
Trigger: CCGGCTGGTGAATTCAAACAACCTGCCCAAAGATTG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAATCTTTGGGCAGGTaGTTTGAATTCACCAGCCGG +
Preference number: 3 (lower is better)
Translates to: PVWASLLINGVVSYRPPTQSLGR*FEFTSR
Trigger: CCGGCTGGTGAATTCAAACAACCTGCCCAAAGATTG...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTCCAAGGGAAGGCAGATaGGACCCAAAGTTAACACCT +
Preference number: 3 (lower is better)
Translates to: APCDPIANRGKTCVPISAPREGR*DPKLTP
Trigger: AGGTGTTAACTTTGGGTCCAATCTGCCTTCCCTTGG...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTTCCATGTTCATTGTTTaGATGAACAGGACCACACCC +
Preference number: 3 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCSMFIV*MNRTTP
Trigger: GGGTGTGGTCCTGTTCATCAAAACAATGAACATGGA...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTTCCATGTTCATTGTTTaGATGAACAGGACCACACCC +
Preference number: 3 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPSMFIV*MNRTTP
Trigger: GGGTGTGGTCCTGTTCATCAAAACAATGAACATGGA...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTATGCACTCAAACGTGTaGTCACTTCTCCTTCCCCAC +
Preference number: 3 (lower is better)
Translates to: APCDPIANRGKTCVPISAMHSNV*SLLLPH
Trigger: GTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCAT...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGTCACTGTGGATTTCCTaGGTGTGGGGTTTGCCTATT +
Preference number: 3 (lower is better)
Translates to: LINGVVSYRPPTQHAPWESLWIS*VWGLPI
Trigger: AATAGGCAAACCCCACACCAAGGAAATCCACAGTGA...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGCGTATTATTTTAGGGTaGGTGAAGTACAGGCTTCAG +
Preference number: 3 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMRIILG*VKYRLQ
Trigger: CTGAAGCCTGTACTTCACCAACCCTAAAATAATACG...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCCACCACGACTGCCCGTaGACCCCATTCTCACAGAAC +
Preference number: 3 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTHHDCP*TPFSQN
Trigger: GTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTG...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTAGTTCAAGTATGATTTaGCAGTTAGACCCAAGGGCC +
Preference number: 3 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPSSSMI*QLDPRA
Trigger: GGCCCTTGGGTCTAACTGCAAAATCATACTTGAACT...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCCTCAGCTCATCCATGTaGTCACAAATGACAGGATTT +
Preference number: 3 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVLSSSM*SQMTGF
Trigger: AAATCCTGTCATTTGTGACAACATGGATGAGCTGAG...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAGAGAGGTCGAAGGAGTaGCCAGCCCCATCTTTGAAT +
Preference number: 3 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQERSKE*PAPSLN
Trigger: ATTCAAAGATGGGGCTGGCAACTCCTTCGACCTCTC...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTCCGAGGTTCACGGGCTaGGAGCCACCCAGCAGACAC +
Preference number: 3 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLPRFTG*EPPSRH
Trigger: GTGTCTGCTGGGTGGCTCCAAGCCCGTGAACCTCGG...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCGCATGGGCCTATTGGTaGGCCTGGCCTCAGGCCTGC +
Preference number: 3 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTAWAYW*AWPQAC
Trigger: GCAGGCCTGAGGCCAGGCCAACCAATAGGCCCATGC...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCGAGGGCAGACAACTTTaGTTTTCCACTCAAATGTCA +
Preference number: 3 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVEGRQL*FSTQMS
Trigger: TGACATTTGAGTGGAAAACAAAAGTTGTCTGCCCTC...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGTGCACTCCAACTTCTTaGGAGGGCAGACAACTTTTG +
Preference number: 3 (lower is better)
Translates to: LINGVVSYRPPTQHAPWECTPTS*EGRQLL
Trigger: CAAAAGTTGTCTGCCCTCCAAAGAAGTTGGAGTGCA...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 72 bp TTCCAGAAATCCAGTCTCGTCCATACAACCTCCTGGTaGCACACACACTGGCTCCTTGTGACCCGATCGCCA +
Preference number: 3 (lower is better)
Translates to: FQKSSLVHTTSW*HTHWLLVTRSP
Trigger: TGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTATGGACGAGACTGGATTTCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 72 bp CTTGCACACAAGCTCACCTGCACCACGACTGCCCGTTaGCCCCATTCTCACAGAACAATGTCCAGAACTGAC +
Preference number: 3 (lower is better)
Translates to: LAHKLTCTTTAR*PHSHRTMSRTD
Trigger: GTCAGTTCTGGACATTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 72 bp ATGCTGGTGAGCCCGATATCTGAGCACACTCAAACGTaGTCCTGGTGGAGAAGCGCTGGTTCCCACACTTGT +
Preference number: 3 (lower is better)
Translates to: MLVSPISEHTQT*SWWRSAGSHTC
Trigger: ACAAGTGTGGGAACCAGCGCTTCTCCACCAGGATCACGTTTGAGTGTGCTCAGATATCGGGCTCACCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR TCA 72 bp TATTGGTTGGCCTGGCCTCAGGCCTGCACACGAAACTaGTCACACTCTTATAGCTCAGGCCGGATTTGGAGG +
Preference number: 3 (lower is better)
Translates to: YWLAWPQACTRN*SHSYSSGRIWR
Trigger: CCTCCAAATCCGGCCTGAGCTATAAGAGTGTGATCAGTTTCGTGTGCAGGCCTGAGGCCAGGCCAACCAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 72 bp ACAACTTTGTCACCTATGACACCCAGCTTCTGCGTGTaGACGAGTCCCAGGACCTGGACGTCACCAGTTGTG +
Preference number: 3 (lower is better)
Translates to: TTLSPMTPSFCV*TSPRTWTSPVV
Trigger: CACAACTGGTGACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGGTGTCATAGGTGACAAAGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 72 bp TCAAACAAGCCAGCCAAACCGGTACAGGCTGAGGGATaGTGCAGGGCGGTTTGCTTCTCAGCAATAGAACAC +
Preference number: 3 (lower is better)
Translates to: SNKPAKPVQAEG*CRAVCFSAIEH
Trigger: GTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTGTACCGGTTTGGCTGGCTTGTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 72 bp TCCCCACTGACAGCGACATTAGCAGGCAGCCAGTGGTaGAGACAACATGCCTTTTTGCCATCCAGCTTACCA +
Preference number: 3 (lower is better)
Translates to: SPLTATLAGSQW*RQHAFLPSSLP
Trigger: TGGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAATGTCGCTGTCAGTGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 72 bp ACTGTGACAGTCACAACAGGCTCCAAGTTCTGGGCTTaGTTCTGCCTTACCTATCCAACACCCCCAGGCCAT +
Preference number: 3 (lower is better)
Translates to: TVTVTTGSKFWA*FCLTYPTPPGH
Trigger: ATGGCCTGGGGGTGTTGGATAGGTAAGGCAGAAGCAAGCCCAGAACTTGGAGCCTGTTGTGACTGTCACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 72 bp AGCTCCCCCAGGGAACACAGGCAAATGTCTAGGAATTaGTGCCTACCTGGAGGCCTGCTGGCCATTTTCTAT +
Preference number: 3 (lower is better)
Translates to: SSPREHRQMSRN*CLPGGLLAIFY
Trigger: ATAGAAAATGGCCAGCAGGCCTCCAGGTAGGCAGCAATTCCTAGACATTTGCCTGTGTTCCCTGGGGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 72 bp TTTCATACTTCATCTGGCAAGCCGATGCATATCGGTTaGAGCCCGGCACTGGATTCAGAGGCCGACACACGT +
Preference number: 3 (lower is better)
Translates to: FHTSSGKPMHIG*SPALDSEADTR
Trigger: ACGTGTGTCGGCCTCTGAATCCAGTGCCGGGCTGCAACCGATATGCATCGGCTTGCCAGATGAAGTATGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 72 bp CCTTCCCCACTGACAGCGACATTAGCAGGCAGCCAGTaGTGCAGACAACATGCCTTTTTGCCATCCAGCTTA +
Preference number: 3 (lower is better)
Translates to: PSPLTATLAGSQ*CRQHAFLPSSL
Trigger: TAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAATGTCGCTGTCAGTGGGGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 72 bp AGTCAGATGTGTAAGAGGTCCTCGTCGCTGTCGTCATaGAAGGACACCAGCTTGGTGGAGCTCACTGTCTTC +
Preference number: 3 (lower is better)
Translates to: SQMCKRSSSLSS*KDTSLVELTVF
Trigger: GAAGACAGTGAGCTCCACCAAGCTGGTGTCCTTCCATGACGACAGCGACGAGGACCTCTTACACATCTGACT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAGAGTGGAAGTCTTATTaGGTTGGAGGTGCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQEWKSY*VGGAWL
Trigger: CAGCCAAGCACCTCCAACCAAATAAGACTTCCACTC...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTATGCTGCAGGGCGGTTaGCTTCTCAGCAATAGAACA +
Preference number: 3 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSMLQGG*LLSNRT
Trigger: TGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCAT...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGGAGTCCAATTCTGATTaGCTGTCACGGGATGTTTTC +
Preference number: 3 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEESNSD*LSRDVF
Trigger: GAAAACATCCCGTGACAGCAAATCAGAATTGGACTC...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCTCACTGTGGATTTCCTaGGTGTGGGGTTTGCCTATT +
Preference number: 3 (lower is better)
Translates to: PVWASLLINGVVSYRPPTSLWIS*VWGLPI
Trigger: AATAGGCAAACCCCACACCAAGGAAATCCACAGTGA...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCCACCACGACTGCCCGTaGACCCCATTCTCACAGAAC +
Preference number: 3 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLHHDCP*TPFSQN
Trigger: GTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTG...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGGGCTATCTTGCCGCCTaGCACACAAGCTCACCTGCA +
Preference number: 3 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVGYLAA*HTSSPA
Trigger: TGCAGGTGAGCTTGTGTGCAAGGCGGCAAGATAGCC...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACGGCTATCTTGCCGCCTaGCACACAAGCTCACCTGCA +
Preference number: 3 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDGYLAA*HTSSPA
Trigger: TGCAGGTGAGCTTGTGTGCAAGGCGGCAAGATAGCC...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGACCCCATTCACTAGATaGTGTTTCCCTCAAACACTG +
Preference number: 3 (lower is better)
Translates to: LINGVVSYRPPTQHAPWETPFTR*CFPQTL
Trigger: CAGTGTTTGAGGGAAACACAATCTAGTGAATGGGGT...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCACCCACCATCACTTCTaGGTTGTCACCGAGGCCAGC +
Preference number: 3 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLTHHHF*VVTEAS
Trigger: GCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGT...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAATGTCCGGTAGCTGTTaGAGTGTCTGCAGAAGCCCC +
Preference number: 3 (lower is better)
Translates to: PEVEEVEEGADASGVTFTMSGSC*SVCRSP
Trigger: GGGGCTTCTGCAGACACTCAAACAGCTACCGGACAT...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGTACGTGACAACAACTTaGTCACCTATGACACCCAGC +
Preference number: 3 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRYVTTT*SPMTPS
Trigger: GCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTA...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGTTGCCATTTATAGGGTaGGTGATGGTCCCATTCACC +
Preference number: 3 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQLPFIG*VMVPFT
Trigger: GGTGAATGGGACCATCACCAACCCTATAAATGGCAA...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 72 bp GTTGAAATCAAACAAGCCAGCCAAACCGGTACAGGCTaGGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAAT +
Preference number: 3 (lower is better)
Translates to: VEIKQASQTGTG*GMLQGGLLLSN
Trigger: ATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTGTACCGGTTTGGCTGGCTTGTTTGATTTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 72 bp CATCGACAGAGGTGTCAACAGCCGTCCAAGGTTTCCTaGCTGTGCTTAGGCCAGTCAGGTCGTACTCATTTC +
Preference number: 3 (lower is better)
Translates to: HRQRCQQPSKVS*LCLGQSGRTHF
Trigger: GAAATGAGTACGACCTGACTGGCCTAAGCACAGTCAGGAAACCTTGGACGGCTGTTGACACCTCTGTCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR TCA 72 bp AATAAGTGTATTCGCCAGCGCTCACGATGGTGTCGTTaGGGCCCAGGGGCTTCAGGTCATACAAGTTGCCAT +
Preference number: 3 (lower is better)
Translates to: NKCIRQRSRWCR*GPGASGHTSCH
Trigger: ATGGCAACTTGTATGACCTGAAGCCCCTGGGCCTCAACGACACCATCGTGAGCGCTGGCGAATACACTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR TCA 72 bp GACCACCTTGGACTTGTCACTTGTGGGGCAGACGTCTaGGGAAAGCTTCCCACAGACCCGGAAGTAATAAGT +
Preference number: 3 (lower is better)
Translates to: DHLGLVTCGADV*GKLPTDPEVIS
Trigger: ACTTATTACTTCCGGGTCTGTGGGAAGCTTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR TCA 72 bp TTTGTGAAATCCCTGCGGTTCCCGCTTTTCCTGACATaGGGAGACCACCTTGGACTTGTCACTTGTGGGGCA +
Preference number: 3 (lower is better)
Translates to: FVKSLRFPLFLT*GDHLGLVTCGA
Trigger: TGCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATGTCAGGAAAAGCGGGAACCGCAGGGATTTCACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR TCA 72 bp ACATGGGCCTGGAGTTCACTTGGCTCTCGCTGCAGGTaGATCGGATGGTGGTTGACTTTTTCCGAATCCCAT +
Preference number: 3 (lower is better)
Translates to: TWAWSSLGSRCR*IGWWLTFSESH
Trigger: ATGGGATTCGGAAAAAGTCAACCACCATCCGATTCACCTGCAGCGAGAGCCAAGTGAACTCCAGGCCCATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 72 bp GGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATaGCTTATTCCAATGACTGTAAACAATCAGGAAGGA +
Preference number: 3 (lower is better)
Translates to: GHKVPPCGRSEP*LIPMTVNNQEG
Trigger: TCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 72 bp TCCCCCAGGGAACACAGGCAAATGTCTAGGAATTGCTaGCTACCTGGAGGCCTGCTGGCCATTTTCTATTGT +
Preference number: 3 (lower is better)
Translates to: SPREHRQMSRNC*LPGGLLAIFYC
Trigger: ACAATAGAAAATGGCCAGCAGGCCTCCAGGTAGGCAGCAATTCCTAGACATTTGCCTGTGTTCCCTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 72 bp GCCCTGATCTTTTTCATACTTCATCTGGCAAGCCGATaGATATCGGTTGCAGCCCGGCACTGGATTCAGAGG +
Preference number: 3 (lower is better)
Translates to: ALIFFILHLASR*ISVAARHWIQR
Trigger: CCTCTGAATCCAGTGCCGGGCTGCAACCGATATGCATCGGCTTGCCAGATGAAGTATGAAAAAGATCAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 72 bp CTCCTTACTGTGACAGTCACAACAGGCTCCAAGTTCTaGGCTTGCTTCTGCCTTACCTATCCAACACCCCCA +
Preference number: 3 (lower is better)
Translates to: LLTVTVTTGSKF*ACFCLTYPTPP
Trigger: TGGGGGTGTTGGATAGGTAAGGCAGAAGCAAGCCCAGAACTTGGAGCCTGTTGTGACTGTCACAGTAAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 72 bp CTGGCAAGCCGATGCATATCGGTTGCAGCCCGGCACTaGATTCAGAGGCCGACACACGTTAATGTAGTATTT +
Preference number: 3 (lower is better)
Translates to: LASRCISVAARH*IQRPTHVNVVF
Trigger: AAATACTACATTAACGTGTGTCGGCCTCTGAATCCAGTGCCGGGCTGCAACCGATATGCATCGGCTTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 72 bp ACATACATGATGCTCAAAGATCCATTCGCCGCGGCTTaGGGACTCATCTGCACCACACCCAGATTCCAGCTA +
Preference number: 3 (lower is better)
Translates to: TYMMLKDPFAAA*GLICTTPRFQL
Trigger: TAGCTGGAATCTGGGTGTGGTGCAGATGAGTCCCCAAGCCGCGGCGAATGGATCTTTGAGCATCATGTATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 72 bp AACTCGGGGATCCCGTCCTCCACCAGAGGGTCACAGTaGAAGAAGATGGTGGAAGAAACAGACTTGGTCTTA +
Preference number: 3 (lower is better)
Translates to: NSGIPSSTRGSQ*KKMVEETDLVL
Trigger: TAAGACCAAGTCTGTTTCTTCCACCATCTTCTTCCACTGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCATGCAGCCCTCTGTTTaGAGATGCGTCCGGCCTTAT +
Preference number: 3 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTMQPSV*RCVRPY
Trigger: ATAAGGCCGGACGCATCTCAAAACAGAGGGCTGCAT...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTGAGTCCAATTCTGATTaGCTGTCACGGGATGTTTTC +
Preference number: 3 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLESNSD*LSRDVF
Trigger: GAAAACATCCCGTGACAGCAAATCAGAATTGGACTC...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCCATCAGTGCTTTAACTaGTACAATGGATCGGACCAG +
Preference number: 3 (lower is better)
Translates to: PVWASLLINGVVSYRPPTHQCFN*YNGSDQ
Trigger: CTGGTCCGATCCATTGTACAAGTTAAAGCACTGATG...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTCATCAGTGCTTTAACTaGTACAATGGATCGGACCAG +
Preference number: 3 (lower is better)
Translates to: APCDPIANRGKTCVPISAHQCFN*YNGSDQ
Trigger: CTGGTCCGATCCATTGTACAAGTTAAAGCACTGATG...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCGGCTATCTTGCCGCCTaGCACACAAGCTCACCTGCA +
Preference number: 3 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALGYLAA*HTSSPA
Trigger: TGCAGGTGAGCTTGTGTGCAAGGCGGCAAGATAGCC...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGACCCCATTCACTAGATaGTGTTTCCCTCAAACACTG +
Preference number: 3 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRTPFTR*CFPQTL
Trigger: CAGTGTTTGAGGGAAACACAATCTAGTGAATGGGGT...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCACCATCACTTCTTGGTaGTCACCGAGGCCAGCATCC +
Preference number: 3 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLTITSW*SPRPAS
Trigger: GGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGT...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGACCATCACTTCTTGGTaGTCACCGAGGCCAGCATCC +
Preference number: 3 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVTITSW*SPRPAS
Trigger: GGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGT...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTCTGACTTCATTTCTTTaGGATATACACCCAGATGTG +
Preference number: 3 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPLTSFL*DIHPDV
Trigger: CACATCTGGGTGTATATCCAAAAGAAATGAAGTCAG...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAGGGCCTGGAGTTCACTaGGCTCTCGCTGCAGGTGAA +
Preference number: 3 (lower is better)
Translates to: FDIPVWASLLINGVVSYRGPGVH*ALAAGE
Trigger: TTCACCTGCAGCGAGAGCCAAGTGAACTCCAGGCCC...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGTGCACTCCAACTTCTTaGGAGGGCAGACAACTTTTG +
Preference number: 3 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLCTPTS*EGRQLL
Trigger: CAAAAGTTGTCTGCCCTCCAAAGAAGTTGGAGTGCA...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCCCTGGACGTCACCAGTaGTGGTCCTTCTGCAAATGC +
Preference number: 3 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLPGRHQ*WSFCKC
Trigger: GCATTTGCAGAAGGACCACAACTGGTGACGTCCAGG...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGCACACAAATCAATCTTaGGGCAGGTTGTTTGAATTC +
Preference number: 3 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEHTNQS*GRLFEF
Trigger: GAATTCAAACAACCTGCCCAAAGATTGATTTGTGTG...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCATGCTGCAGGGCGGTTaGCTTCTCAGCAATAGAACA +
Preference number: 3 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTMLQGG*LLSNRT
Trigger: TGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCAT...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTAAAAATACACTCATGTaGAAATCAAACAAGCCAGCC +
Preference number: 3 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPKNTLM*KSNKPA
Trigger: GGCTGGCTTGTTTGATTTCAACATGAGTGTATTTTT...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCTTAAAAATGAGACGGTaGAGGTTTTTGGACTCTACA +
Preference number: 3 (lower is better)
Translates to: LLKGIALCVSHWVGALCPLKMRR*RFLDST
Trigger: TGTAGAGTCCAAAAACCTCAACCGTCTCATTTTTAA...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATGGTCAGAACCTCATCCTCGTATTATTTTAGGGTaGGTGAAGTACAGGCTTCAG +
Preference number: 3 (lower is better)
Translates to: QLPCPSELSPLGWSEPHPRIILG*VKYRLQ
Trigger: CTGAAGCCTGTACTTCACCAACCCTAAAATAATACG...AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCTCAATGTGGCTATCTaGCCGCCTTGCACACAAGCT +
Preference number: 3 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVLNVAI*PPCTQA
Trigger: AGCTTGTGTGCAAGGCGGCAAGATAGCCACATTGAG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGTTGATCCATCTTTATTaGTCAGTAGACACTGAGGCT +
Preference number: 3 (lower is better)
Translates to: LINGVVSYRPPTQHAPWELIHLY*SVDTEA
Trigger: AGCCTCAGTGTCTACTGACAAATAAAGATGGATCAA...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATGGTCAGAACCTCATCCTAACACAAATCCACTGTaGGGATCCCTTATAGAGCAA +
Preference number: 3 (lower is better)
Translates to: QLPCPSELSPLGWSEPHPNTNPL*GSLIEQ
Trigger: TTGCTCTATAAGGGATCCCAACAGTGGATTTGTGTT...AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCACAAGTTGCCATGCCTaGGGTCTTTCACCTCACAGT +
Preference number: 3 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTTSCHA*GLSPHS
Trigger: ACTGTGAGGTGAAAGACCCAAGGCATGGCAACTTGT...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTTCATTTGCTATTGGATaGAGTATTGGTGGTCCTGCT +
Preference number: 3 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLSFAIG*SIGGPA
Trigger: AGCAGGACCACCAATACTCAATCCAATAGCAAATGA...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCTCGATATCAAACCTCTaGAATGCAGGTCTGCCCACC +
Preference number: 3 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTSISNL*NAGLPT
Trigger: GGTGGGCAGACCTGCATTCAAGAGGTTTGATATCGA...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCCGAGGCTGAAGCTCTaGCCATTTATAGGGTTGGTG +
Preference number: 3 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVPRLKL*PFIGLV
Trigger: CACCAACCCTATAAATGGCAAGAGCTTCAGCCTCGG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 72 bp AAACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTaGGCCATGCCTTATTCCAATGACTGTAAACAATCA +
Preference number: 3 (lower is better)
Translates to: KPWAQGTALWPI*AMPYSNDCKQS
Trigger: TGATTGTTTACAGTCATTGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 72 bp CTTAGCTGGCAGTACCGTCCCCACATATTGTGGTTCTaGTGGTGGCACCTTAGTCCTGTGAAGGTCCTCATT +
Preference number: 3 (lower is better)
Translates to: LSWQYRPHILWF*WWHLSPVKVLI
Trigger: AATGAGGACCTTCACAGGACTAAGGTGCCACCATCAGAACCACAATATGTGGGGACGGTACTGCCAGCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 72 bp CTTATAGAGCAAGCCTGGTCTGTATCCGTCGTTGTCTaGATGGGACAGGCAGCCTCTGTGTTCCACAGGAAA +
Preference number: 3 (lower is better)
Translates to: LIEQAWSVSVVV*MGQAASVFHRK
Trigger: TTTCCTGTGGAACACAGAGGCTGCCTGTCCCATTCAGACAACGACGGATACAGACCAGGCTTGCTCTATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR TCA 72 bp TCTCAATTCCGACTGGCCTTGCTGGCTTCCAATTCTTaGGCTCTTCAGTTTGGGTTTCTGCCTCACAGCCAG +
Preference number: 3 (lower is better)
Translates to: SQFRLALLASNS*ALQFGFLPHSQ
Trigger: CTGGCTGTGAGGCAGAAACCCAAACTGAAGAGCTCAAGAATTGGAAGCCAGCAAGGCCAGTCGGAATTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR TCA 72 bp TCATGTAAACCAACCCCTTCTCGCTGTAAGCAGCTGTaGATCCCGCCCTGCCACTTAAGGAGCTCAGATCAA +
Preference number: 3 (lower is better)
Translates to: SCKPTPSRCKQL*IPPCHLRSSDQ
Trigger: TTGATCTGAGCTCCTTAAGTGGCAGGGCGGGATTCACAGCTGCTTACAGCGAGAAGGGGTTGGTTTACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 72 bp TGTTGGCTCCAGAGCACGCCGGGTTTCTGGAGCTTGTaGTGGAGGAAAGTTGGATCTCATACAGGTAGTTGT +
Preference number: 3 (lower is better)
Translates to: CWLQSTPGFWSL*WRKVGSHTGSC
Trigger: ACAACTACCTGTATGAGATCCAACTTTCCTCCATCACAAGCTCCAGAAACCCGGCGTGCTCTGGAGCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 72 bp GTCTTGTCAGAGGTTCCAACTTTCCGACTGAAGTGCTaGTCGTTGGGCTTCACCTGGCATATGTTGGCTCCA +
Preference number: 3 (lower is better)
Translates to: VLSEVPTFRLKC*SLGFTWHMLAP
Trigger: TGGAGCCAACATATGCCAGGTGAAGCCCAACGATCAGCACTTCAGTCGGAAAGTTGGAACCTCTGACAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 72 bp AGCATGAGGCCAAGTGCAATGCTAGGGCCGAGGCTCTaGCCCATGATTTTTCATGCAGTTTCTGTAAGTCAC +
Preference number: 3 (lower is better)
Translates to: SMRPSAMLGPRL*PMIFHAVSVSH
Trigger: GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCATTGCACTTGGCCTCATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGGAGTGGAAGTCTTATTaGGTTGGAGGTGCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVEWKSY*VGGAWL
Trigger: CAGCCAAGCACCTCCAACCAAATAAGACTTCCACTC...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCATGCAGCCCTCTGTTTaGAGATGCGTCCGGCCTTAT +
Preference number: 3 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALMQPSV*RCVRPY
Trigger: ATAAGGCCGGACGCATCTCAAAACAGAGGGCTGCAT...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACCAATCTTTGGGCAGGTaGTTTGAATTCACCAGCCGG +
Preference number: 3 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHQSLGR*FEFTSR
Trigger: CCGGCTGGTGAATTCAAACAACCTGCCCAAAGATTG...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTCACACAAATCAATCTTaGGGCAGGTTGTTTGAATTC +
Preference number: 3 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPHTNQS*GRLFEF
Trigger: GAATTCAAACAACCTGCCCAAAGATTGATTTGTGTG...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACATGCTGCAGGGCGGTTaGCTTCTCAGCAATAGAACA +
Preference number: 3 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDMLQGG*LLSNRT
Trigger: TGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCAT...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACCCAAGGGAAGGCAGATaGGACCCAAAGTTAACACCT +
Preference number: 3 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDPREGR*DPKLTP
Trigger: AGGTGTTAACTTTGGGTCCAATCTGCCTTCCCTTGG...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACATGCACTCAAACGTGTaGTCACTTCTCCTTCCCCAC +
Preference number: 3 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDMHSNV*SLLLPH
Trigger: GTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCAT...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTCAACCTCCCATCTGGTaGCTGAAGCGTCTCCATCTC +
Preference number: 3 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIQPPIW*LKRLHL
Trigger: GAGATGGAGACGCTTCAGCAACCAGATGGGAGGTTG...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCCTGACTTCATTTCTTTaGGATATACACCCAGATGTG +
Preference number: 3 (lower is better)
Translates to: PVWASLLINGVVSYRPPTLTSFL*DIHPDV
Trigger: CACATCTGGGTGTATATCCAAAAGAAATGAAGTCAG...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCGGCTTTTTCCCTATCTaGGCTATTGTGAATAATGCT +
Preference number: 3 (lower is better)
Translates to: PVWASLLINGVVSYRPPTGFFPI*AIVNNA
Trigger: AGCATTATTCACAATAGCCAAGATAGGGAAAAAGCC...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAGGCCACCTTCAGATTTaGCCAGACTGGAGAGGTCGT +
Preference number: 3 (lower is better)
Translates to: FDIPVWASLLINGVVSYRGHLQI*PDWRGR
Trigger: ACGACCTCTCCAGTCTGGCAAAATCTGAAGGTGGCC...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACAGTGTTTCGGATCCCTaGCCCAGAGTCGATATCTTG +
Preference number: 3 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDSVSDP*PRVDIL
Trigger: CAAGATATCGACTCTGGGCAAGGGATCCGAAACACT...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCCAGTCATCATGCTCGTaGCTCTTCATGGGACAGGCT +
Preference number: 3 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALQSSCS*LFMGQA
Trigger: AGCCTGTCCCATGAAGAGCAACGAGCATGATGACTG...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTATGAGCATGGGCCTATaGGTTGGCCTGGCCTCAGGC +
Preference number: 3 (lower is better)
Translates to: ITTSAMNKGRQVNNRASIMSMGL*VGLASG
Trigger: GCCTGAGGCCAGGCCAACCAATAGGCCCATGCTCAT...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTTGTTTCTGGACGAATTaGCACTCCAACTTCTTTGGA +
Preference number: 3 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPCFWTN*HSNFFG
Trigger: TCCAAAGAAGTTGGAGTGCAAATTCGTCCAGAAACA...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 72 bp AAACCGGTACAGGCTGAGGGATGCTGCAGGGCGGTTTaGTTCTCAGCAATAGAACACCAGAGTCTATATACA +
Preference number: 3 (lower is better)
Translates to: KPVQAEGCCRAV*FSAIEHQSLYT
Trigger: TGTATATAGACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTGTACCGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 72 bp AACGGCAGCAGGAACACTGGGACCCAAATCTCCTCTTaGCACCGCTGGTTTAGACAACTCACTTCATTTGAA +
Preference number: 3 (lower is better)
Translates to: NGSRNTGTQISS*HRWFRQLTSFE
Trigger: TTCAAATGAAGTGAGTTGTCTAAACCAGCGGTGCCAAGAGGAGATTTGGGTCCCAGTGTTCCTGCTGCCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 72 bp CAGCTGGAGGCTTTTCTCAATTCCGACTGGCCTTGCTaGCTTCCAATTCTTGAGCTCTTCAGTTTGGGTTTC +
Preference number: 3 (lower is better)
Translates to: QLEAFLNSDWPC*LPILELFSLGF
Trigger: GAAACCCAAACTGAAGAGCTCAAGAATTGGAAGCCAGCAAGGCCAGTCGGAATTGAGAAAAGCCTCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACATCTGTACGCCCAGGCTaGAAGATATCATGCAAAAAG +
Preference number: 3 (lower is better)
Translates to: PEVEEVEEGADASGVTFTSVRPG*KISCKK
Trigger: CTTTTTGCATGATATCTTCAAGCCTGGGCGTACAGA...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCTTAAAAATGAGACGGTaGAGGTTTTTGGACTCTACA +
Preference number: 3 (lower is better)
Translates to: PVWASLLINGVVSYRPPTLKMRR*RFLDST
Trigger: TGTAGAGTCCAAAAACCTCAACCGTCTCATTTTTAA...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACAGACAACATGCCTTTTaGCCATCCAGCTTACCAAGG +
Preference number: 3 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDRQHAF*PSSLPR
Trigger: CCTTGGTAAGCTGGATGGCAAAAAGGCATGTTGTCT...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGTCTAATGTCTATATGTaGTCTCCTGTCTGTATGTCT +
Preference number: 3 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRSNVYM*SPVCMS
Trigger: AGACATACAGACAGGAGACAACATATAGACATTAGA...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCGTCACAAGTCCTTTCTaGAACCTGACTTCCTGCTTC +
Preference number: 3 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLVTSPF*NLTSCF
Trigger: GAAGCAGGAAGTCAGGTTCAAGAAAGGACTTGTGAC...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAAGTTCAAGTATGATTTaGCAGTTAGACCCAAGGGCC +
Preference number: 3 (lower is better)
Translates to: PEVEEVEEGADASGVTFTSSSMI*QLDPRA
Trigger: GGCCCTTGGGTCTAACTGCAAAATCATACTTGAACT...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGTTCAGGTCATACAAGTaGCCATGCCTTGGGTCTTTC +
Preference number: 3 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVFRSYK*PCLGSF
Trigger: GAAAGACCCAAGGCATGGCAACTTGTATGACCTGAA...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGACGTATCTCAGCCTCTaGTTGGCCTTGCCCACGCTA +
Preference number: 3 (lower is better)
Translates to: IGPHVPRGSEQLKINISETYLSL*LALPTL
Trigger: TAGCGTGGGCAAGGCCAACAAGAGGCTGAGATACGT...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACGTCTGCCCACCGTCTTaGTACAGGTCAATTCTATCA +
Preference number: 3 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDVCPPS*YRSILS
Trigger: TGATAGAATTGACCTGTACAAAGACGGTGGGCAGAC...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 72 bp AGCAGCAAGGGTTTCTTCGAATGCAGCCCTCTGTTTTaGGATGCGTCCGGCCTTATGCTTTTAAATGAGGAC +
Preference number: 3 (lower is better)
Translates to: SSKGFFECSPLF*DASGLMLLNED
Trigger: GTCCTCATTTAAAAGCATAAGGCCGGACGCATCTCAAAACAGAGGGCTGCATTCGAAGAAACCCTTGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 72 bp GTTAATGTAGTATTTCCTCCACGTGACATGTTCCCCTaGGTTGTCCATGGCATACCAGTTTCCTCCAAGGCC +
Preference number: 3 (lower is better)
Translates to: VNVVFPPRDMFP*VVHGIPVSSKA
Trigger: GGCCTTGGAGGAAACTGGTATGCCATGGACAACTCAGGGGAACATGTCACGTGGAGGAAATACTACATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR TCA 72 bp AGTACTTGGTCTTGTCAGAGGTTCCAACTTTCCGACTaGAGTGCTGATCGTTGGGCTTCACCTGGCATATGT +
Preference number: 3 (lower is better)
Translates to: STWSCQRFQLSD*SADRWASPGIC
Trigger: ACATATGCCAGGTGAAGCCCAACGATCAGCACTTCAGTCGGAAAGTTGGAACCTCTGACAAGACCAAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR GCA 72 bp TCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCAACTaGTTTCAGGACTTCAAACTCCTTACTGTGACAGTC +
Preference number: 3 (lower is better)
Translates to: SKAQSGPPTALN*FQDFKLLTVTV
Trigger: GACTGTCACAGTAAGGAGTTTGAAGTCCTGAAAGCAGTTGAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 72 bp GCCGCAGGTCGTAGGTTTTGTGTTTCTGGACGAATTTaGACTCCAACTTCTTTGGAGGGCAGACAACTTTTG +
Preference number: 3 (lower is better)
Translates to: AAGRRFCVSGRI*TPTSLEGRQLL
Trigger: CAAAAGTTGTCTGCCCTCCAAAGAAGTTGGAGTGCAAATTCGTCCAGAAACACAAAACCTACGACCTGCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 72 bp AAATGTCTAGGAATTGCTGCCTACCTGGAGGCCTGCTaGCCATTTTCTATTGTGATTTCACGTGTGGTCAGC +
Preference number: 3 (lower is better)
Translates to: KCLGIAAYLEAC*PFSIVISRVVS
Trigger: GCTGACCACACGTGAAATCACAATAGAAAATGGCCAGCAGGCCTCCAGGTAGGCAGCAATTCCTAGACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGTTTGGTTGGAGGTGCTaGGCTGTCCCGCGGCTCCGT +
Preference number: 3 (lower is better)
Translates to: KGMENRMLSLRSLFITLEFGWRC*AVPRLR
Trigger: ACGGAGCCGCGGGACAGCCAAGCACCTCCAACCAAA...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACTCTGTACGCCCAGGCTaGAAGATATCATGCAAAAAG +
Preference number: 3 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDSVRPG*KISCKK
Trigger: CTTTTTGCATGATATCTTCAAGCCTGGGCGTACAGA...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACTTTGGGCAGGTTGTTaGAATTCACCAGCCGGCAAA +
Preference number: 3 (lower is better)
Translates to: FDIPVWASLLINGVVSYRLWAGC*NSPAGK
Trigger: TTTGCCGGCTGGTGAATTCAAACAACCTGCCCAAAG...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACAATCTTTGGGCAGGTaGTTTGAATTCACCAGCCGG +
Preference number: 3 (lower is better)
Translates to: FDIPVWASLLINGVVSYRQSLGR*FEFTSR
Trigger: CCGGCTGGTGAATTCAAACAACCTGCCCAAAGATTG...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGACACACAAATCAATCTTaGGGCAGGTTGTTTGAATTC +
Preference number: 3 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERHTNQS*GRLFEF
Trigger: GAATTCAAACAACCTGCCCAAAGATTGATTTGTGTG...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAAAAAATACACTCATGTaGAAATCAAACAAGCCAGCC +
Preference number: 3 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQKNTLM*KSNKPA
Trigger: GGCTGGCTTGTTTGATTTCAACATGAGTGTATTTTT...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTAAAAATACACTCATGTaGAAATCAAACAAGCCAGCC +
Preference number: 3 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSKNTLM*KSNKPA
Trigger: GGCTGGCTTGTTTGATTTCAACATGAGTGTATTTTT...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCAGACAACATGCCTTTTaGCCATCCAGCTTACCAAGG +
Preference number: 3 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALRQHAF*PSSLPR
Trigger: CCTTGGTAAGCTGGATGGCAAAAAGGCATGTTGTCT...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAATGCACTCAAACGTGTaGTCACTTCTCCTTCCCCAC +
Preference number: 3 (lower is better)
Translates to: FDIPVWASLLINGVVSYRMHSNV*SLLLPH
Trigger: GTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCAT...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCTCACTGTGGATTTCCTaGGTGTGGGGTTTGCCTATT +
Preference number: 3 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALSLWIS*VWGLPI
Trigger: AATAGGCAAACCCCACACCAAGGAAATCCACAGTGA...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAGTTCAAGTATGATTTaGCAGTTAGACCCAAGGGCC +
Preference number: 3 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVSSSMI*QLDPRA
Trigger: GGCCCTTGGGTCTAACTGCAAAATCATACTTGAACT...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCCAGAGTCGATATCTaGATGCAGGAATTTGAGGGG +
Preference number: 3 (lower is better)
Translates to: FDIPVWASLLINGVVSYRPRVDI*MQEFEG
Trigger: CCCCTCAAATTCCTGCATCAAGATATCGACTCTGGG...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCTTGCCAGCCCCATCTTaGAATGAACATTCAGTCAGA +
Preference number: 3 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLLPAPS*NEHSVR
Trigger: TCTGACTGAATGTTCATTCAAAGATGGGGCTGGCAA...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCGAGTCCAATTCTGATTaGCTGTCACGGGATGTTTTC +
Preference number: 3 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALESNSD*LSRDVF
Trigger: GAAAACATCCCGTGACAGCAAATCAGAATTGGACTC...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCTCCTTGGTGTGGGGTTaGCCTATTCCATCTTTAGCA +
Preference number: 3 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTSLVWG*PIPSLA
Trigger: TGCTAAAGATGGAATAGGCAAACCCCACACCAAGGA...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCGTATTATTTTAGGGTaGGTGAAGTACAGGCTTCAG +
Preference number: 3 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVRIILG*VKYRLQ
Trigger: CTGAAGCCTGTACTTCACCAACCCTAAAATAATACG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGGATGCTGAGCATTTTTaGATATACCTGTTTGGGCCT +
Preference number: 3 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVDAEHF*IYLFGP
Trigger: AGGCCCAAACAGGTATATCAAAAAATGCTCAGCATC...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCGACAACTCACTTCATTaGAACTGCAGTTACGCAGAA +
Preference number: 3 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLDNSLH*NCSYAE
Trigger: TTCTGCGTAACTGCAGTTCAAATGAAGTGAGTTGTC...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCCAGATTCCAGCTATaGCCTTCTGACACTAAGCAA +
Preference number: 3 (lower is better)
Translates to: FDIPVWASLLINGVVSYRPRFQL*PSDTKQ
Trigger: TTGCTTAGTGTCAGAAGGCAATAGCTGGAATCTGGG...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTCGCTGGTTCCCACACTaGTCACCGTTGACATACATG +
Preference number: 3 (lower is better)
Translates to: ITTSAMNKGRQVNNRASIRWFPH*SPLTYM
Trigger: CATGTATGTCAACGGTGACAAGTGTGGGAACCAGCG...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATCAGTCATCATGCTCGTaGCTCTTCATGGGACAGGCT +
Preference number: 3 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNQSSCS*LFMGQA
Trigger: AGCCTGTCCCATGAAGAGCAACGAGCATGATGACTG...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 72 bp GGCAGGTTGTTTGAATTCACCAGCCGGCAAAAATACTaGCAAATGTGCTCTGTACGCCCAGGCTTGAAGATA +
Preference number: 3 (lower is better)
Translates to: GRLFEFTSRQKY*QMCSVRPGLKI
Trigger: TATCTTCAAGCCTGGGCGTACAGAGCACATTTGTCAGTATTTTTGCCGGCTGGTGAATTCAAACAACCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 72 bp GAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATaGTCACCTGCAACACGTGACCATCACAGGCTCCTC +
Preference number: 3 (lower is better)
Translates to: ETFQTEVNQMAQ*SPATRDHHRLL
Trigger: GAGGAGCCTGTGATGGTCACGTGTTGCAGGTGATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 72 bp AGAAAGGGTTATCATGTTCCCAGCAGTCCTCAGCACTaGTTTACCCTGGGCCATACTAGGGATCAACTGTTA +
Preference number: 3 (lower is better)
Translates to: RKGYHVPSSPQH*FTLGHTRDQLL
Trigger: TAACAGTTGATCCCTAGTATGGCCCAGGGTAAATCAGTGCTGAGGACTGCTGGGAACATGATAACCCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677704.1
3UTR GCA 72 bp CACCGTCTTTGTACAGGTCAATTCTATCACGGAGGATaGGGTCTTATTTCCACCACACGGATAACCTTTGGA +
Preference number: 3 (lower is better)
Translates to: HRLCTGQFYHGG*GLISTTRITFG
Trigger: TCCAAAGGTTATCCGTGTGGTGGAAATAAGACCGCATCCTCCGTGATAGAATTGACCTGTACAAAGACGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CCA 72 bp AGGAACACTGGGACCCAAATCTCCTCTTGGCACCGCTaGTTTAGACAACTCACTTCATTTGAACTGCAGTTA +
Preference number: 3 (lower is better)
Translates to: RNTGTQISSWHR*FRQLTSFELQL
Trigger: TAACTGCAGTTCAAATGAAGTGAGTTGTCTAAACCAGCGGTGCCAAGAGGAGATTTGGGTCCCAGTGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTGAGTGGAAGTCTTATTaGGTTGGAGGTGCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: ITTSAMNKGRQVNNRASIEWKSY*VGGAWL
Trigger: CAGCCAAGCACCTCCAACCAAATAAGACTTCCACTC...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGATCTGTACGCCCAGGCTaGAAGATATCATGCAAAAAG +
Preference number: 3 (lower is better)
Translates to: ILTLIISLITTSAMNKGRSVRPG*KISCKK
Trigger: CTTTTTGCATGATATCTTCAAGCCTGGGCGTACAGA...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATCTTTGGGCAGGTTGTTaGAATTCACCAGCCGGCAAA +
Preference number: 3 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNLWAGC*NSPAGK
Trigger: TTTGCCGGCTGGTGAATTCAAACAACCTGCCCAAAG...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCGGCTTTTTCCCTATCTaGGCTATTGTGAATAATGCT +
Preference number: 3 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLGFFPI*AIVNNA
Trigger: AGCATTATTCACAATAGCCAAGATAGGGAAAAAGCC...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCATGTCCGGTAGCTGTTaGAGTGTCTGCAGAAGCCCC +
Preference number: 3 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIMSGSC*SVCRSP
Trigger: GGGGCTTCTGCAGACACTCAAACAGCTACCGGACAT...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 72 bp ACCGGAGAAGTAAGAAAGGACATGAGTGTACCTCCCTaGGCCATGGGATTCTTCAGAGTCAGTAAAGGATAT +
Preference number: 3 (lower is better)
Translates to: TGEVRKDMSVPP*AMGFFRVSKGY
Trigger: ATATCCTTTACTGACTCTGAAGAATCCCATGGCTCAGGGAGGTACACTCATGTCCTTTCTTACTTCTCCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 72 bp ACAGTGGATCTCCAGAATTCATTCATGTTGCATAGCTaGACCTCTGCACCCTTTCACCAACATCTGCTCACT +
Preference number: 3 (lower is better)
Translates to: TVDLQNSFMLHS*TSAPFHQHLLT
Trigger: AGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGTTCAGCTATGCAACATGAATGAATTCTGGAGATCCACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 72 bp TCCCTTGCCCAGAGTCGATATCTTGATGCAGGAATTTaGGGGGCCCTGAGTAAACATCATCATTGCAAACAA +
Preference number: 3 (lower is better)
Translates to: SLAQSRYLDAGI*GALSKHHHCKQ
Trigger: TTGTTTGCAATGATGATGTTTACTCAGGGCCCCTCAAATTCCTGCATCAAGATATCGACTCTGGGCAAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR GCA 72 bp CAAATGTGCTCTGTACGCCCAGGCTTGAAGATATCATaGAAAAAGGTGCAGCCATTCCTGACTAAAGGCATA +
Preference number: 3 (lower is better)
Translates to: QMCSVRPGLKIS*KKVQPFLTKGI
Trigger: TATGCCTTTAGTCAGGAATGGCTGCACCTTTTTGCATGATATCTTCAAGCCTGGGCGTACAGAGCACATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR GCA 72 bp GGCACCGCTGGTTTAGACAACTCACTTCATTTGAACTaGAGTTACGCAGAATGCAGAAATACGCACAGAGAT +
Preference number: 3 (lower is better)
Translates to: GTAGLDNSLHLN*SYAECRNTHRD
Trigger: ATCTCTGTGCGTATTTCTGCATTCTGCGTAACTGCAGTTCAAATGAAGTGAGTTGTCTAAACCAGCGGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 72 bp TTGGACCCAAAGTTAACACCTACGACCAGGAGACTCTaGAGAAAAATGAAAGTGCTGCCTCATAAAGGGTCA +
Preference number: 3 (lower is better)
Translates to: LDPKLTPTTRRL*RKMKVLPHKGS
Trigger: TGACCCTTTATGAGGCAGCACTTTCATTTTTCTCCAGAGTCTCCTGGTCGTAGGTGTTAACTTTGGGTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 72 bp TTCATTGTTTTGATGAACAGGACCACACCCCGAGGTTaGCCTGGAGAAGGTAAAGAAATCGGATCTAGAAAG +
Preference number: 3 (lower is better)
Translates to: FIVLMNRTTPRG*PGEGKEIGSRK
Trigger: CTTTCTAGATCCGATTTCTTTACCTTCTCCAGGCCAACCTCGGGGTGTGGTCCTGTTCATCAAAACAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATGCTGGCTTCCAATTCTaGAGCTCTTCAGTTTGGGTT +
Preference number: 3 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNAGFQF*SSSVWV
Trigger: AACCCAAACTGAAGAGCTCAAGAATTGGAAGCCAGC...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGATGTGATGGAGGAAAGTaGGATCTCATACAGGTAGTT +
Preference number: 3 (lower is better)
Translates to: FDIPVWASLLINGVVSYRCDGGK*DLIQVV
Trigger: AACTACCTGTATGAGATCCAACTTTCCTCCATCACA...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTGAGTGGAAGTCTTATTaGGTTGGAGGTGCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: QASDALKMFIRTRFPLHCEWKSY*VGGAWL
Trigger: CAGCCAAGCACCTCCAACCAAATAAGACTTCCACTC...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGCTTGAGCTCTTCAGTTaGGGTTTCTGCCTCACAGCC +
Preference number: 3 (lower is better)
Translates to: KGMENRMLSLRSLFITLELELFS*GFCLTA
Trigger: GGCTGTGAGGCAGAAACCCAAACTGAAGAGCTCAAG...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR TCA 72 bp GCCTCTGTAGTTCAGTTGGATCATCCCATCATAATATaGAAGCTTCGCATTACTCAGACCCAAGTTCCAAGT +
Preference number: 3 (lower is better)
Translates to: ASVVQLDHPIII*KLRITQTQVPS
Trigger: ACTTGGAACTTGGGTCTGAGTAATGCGAAGCTTTCATATTATGATGGGATGATCCAACTGAACTACAGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 72 bp CATAATGGCTATACCAATTTACATTCTCACCAAAGGTaGACAAGTGTTCGCTTTTCTCCACATCCTCACCCA +
Preference number: 3 (lower is better)
Translates to: HNGYTNLHSHQR*TSVRFSPHPHP
Trigger: TGGGTGAGGATGTGGAGAAAAGCGAACACTTGTCCACCTTTGGTGAGAATGTAAATTGGTATAGCCATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTAAAAATACACTCATGTaGAAATCAAACAAGCCAGCC +
Preference number: 3 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIKNTLM*KSNKPA
Trigger: GGCTGGCTTGTTTGATTTCAACATGAGTGTATTTTT...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCACATGTTCCCCTGAGTaGTCCATGGCATACCAGTTT +
Preference number: 3 (lower is better)
Translates to: VTERRNFPDRSKPNGTMITCSPE*SMAYQF
Trigger: AAACTGGTATGCCATGGACAACTCAGGGGAACATGT...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR-3UTR CAA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGTCTTTCACCTCACAGTaGTCCCCTTCCACTCTGACA +
Preference number: 3 (lower is better)
Translates to: KGMENRMLSLRSLFITLESFTSQ*SPSTLT
Trigger: TGTCAGAGTGGAAGGGGACAACTGTGAGGTGAAAGA...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CCA 72 bp TACACAAAGCAGTATCATAGTCACCATGCTGCACAGTaGATCTCCAGAATTCATTCATGTTGCATAGCTGAA +
Preference number: 3 (lower is better)
Translates to: YTKQYHSHHAAQ*ISRIHSCCIAE
Trigger: TTCAGCTATGCAACATGAATGAATTCTGGAGATCCACTGTGCAGCATGGTGACTATGATACTGCTTTGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 72 bp CTTCCTTATTCACCTTTGAGTATTTGTAGGACACGTTaGAACTTCTCCTACAGCAAGTGGTCAGCTTACTTA +
Preference number: 3 (lower is better)
Translates to: LPYSPLSICRTR*NFSYSKWSAYL
Trigger: TAAGTAAGCTGACCACTTGCTGTAGGAGAAGTTCCAACGTGTCCTACAAATACTCAAAGGTGAATAAGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR-3UTR CAA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTCTTTGGGCAGGTTGTTaGAATTCACCAGCCGGCAAA +
Preference number: 3 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCLWAGC*NSPAGK
Trigger: TTTGCCGGCTGGTGAATTCAAACAACCTGCCCAAAG...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGTCTAATGTCTATATGTaGTCTCCTGTCTGTATGTCT +
Preference number: 3 (lower is better)
Translates to: IGPHVPRGSEQLKINISESNVYM*SPVCMS
Trigger: AGACATACAGACAGGAGACAACATATAGACATTAGA...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 72 bp CATAATGTTCTCTCAGCTCATCCATGTTGTCACAAATaGCAGGATTTCCTTCTTCTGCAAGACTTGGTATTC +
Preference number: 3 (lower is better)
Translates to: HNVLSAHPCCHK*QDFLLLQDLVF
Trigger: GAATACCAAGTCTTGCAGAAGAAGGAAATCCTGTCATTTGTGACAACATGGATGAGCTGAGAGAACATTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CCA 72 bp TTTGTGTTTCTGGACGAATTTGCACTCCAACTTCTTTaGAGGGCAGACAACTTTTGTTTTCCACTCAAATGT +
Preference number: 3 (lower is better)
Translates to: FVFLDEFALQLL*RADNFCFPLKC
Trigger: ACATTTGAGTGGAAAACAAAAGTTGTCTGCCCTCCAAAGAAGTTGGAGTGCAAATTCGTCCAGAAACACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR TCA 72 bp AAAAATAAGCACAGTAAAGGTGGTATCATGAGAACCTaGAGAGATGAGACCTATACCCCAAATCTGGAAAAA +
Preference number: 3 (lower is better)
Translates to: KNKHSKGGIMRT*RDETYTPNLEK
Trigger: TTTTTCCAGATTTGGGGTATAGGTCTCATCTCTTCAGGTTCTCATGATACCACCTTTACTGTGCTTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR TCA 72 bp CTTCTGAGTCCAACCTTTTTAGATTCCACATATAAGTaGGATCATCTGGTATTTTTCTTTCTGTGTCTGGCT +
Preference number: 3 (lower is better)
Translates to: LLSPTFLDSTYK*DHLVFFFLCLA
Trigger: AGCCAGACACAGAAAGAAAAATACCAGATGATCTCACTTATATGTGGAATCTAAAAAGGTTGGACTCAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTTTAAAAATGAGACGGTaGAGGTTTTTGGACTCTACA +
Preference number: 3 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCLKMRR*RFLDST
Trigger: TGTAGAGTCCAAAAACCTCAACCGTCTCATTTTTAA...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR-3UTR CAA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTTCTAATGTCTATATGTaGTCTCCTGTCTGTATGTCT +
Preference number: 3 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCSNVYM*SPVCMS
Trigger: AGACATACAGACAGGAGACAACATATAGACATTAGA...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCGTCGTCCCCGGGATTCTCGCTGTCAAAGCCCACCCCCAGAGGACACACGGCTTGTCCCGCGGCTCCGTaGTCCCCTGCAGGCACTGCG +
Preference number: 4 (lower is better)
Translates to: PSSPGFSLSKPTPRGHTACPAAP*SPAGTA
Trigger: CGCAGTGCCTGCAGGGGAGCACGGAGCCGCGGGACA...AGCCGTGTGTCCTCTGGGGGTGGGCTTTGACAGCGAGAATCCCGGGGACGACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGCCACCAGCAGCAGGCTaGGCACCGCGCCGACTGCCT +
Preference number: 4 (lower is better)
Translates to: RSLARRPAACARRRRECMPPAAG*APRRLP
Trigger: AGGCAGTCGGCGCGGTGCTCAGCCTGCTGCTGGTGG...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CAA 72 bp ACCGCGCCGACTGCCTGGCTCCGTTCTGACAGCCCCTaGTGCATCTGCCCGTCGTCCCCGGGATTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: TAPTAWLRSDSP*CICPSSPGFSL
Trigger: CAGCGAGAATCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGTCGGCGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCCCACCAGCAGCAGGCTaGGCACCGCGCCGACTGCCT +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSPPAAG*APRRLP
Trigger: AGGCAGTCGGCGCGGTGCTCAGCCTGCTGCTGGTGG...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCTGTCCCGCGGCTCCGTaGTCCCCTGCAGGCACTGCG +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVCPAAP*SPAGTA
Trigger: CGCAGTGCCTGCAGGGGAGCACGGAGCCGCGGGACA...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCGGGCAAAGGCGGAGGTaGAGACGGAGCGGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSGQRRR*RRSGSP
Trigger: CGGGCTCCCGCTCCGTCTCCACCTCCGCCTTTGCCC...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGAACACGCGGCTGCTTCTaGAGGGCACGGCTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGTRGCF*RARLSA
Trigger: GGCACTGAGCCGTGCCCTCCAGAAGCAGCCGCGTGT...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR TCA 90 bp TCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGGGACCAGGACCCGGTaGGAGAGGAGAGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: SVACSQASGVCQEKKRVHGTRTR*ERRAAA
Trigger: TGCGGCTGCTCTCCTCTCTCACCGGGTCCTGGTCCC...ATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCGTCGTCCCCGGGATTCTCGCTGTCAAAGCCCACCCCCAGAGGACACACGGCTCTCGGGACACCCTCGTaGCTTGCCTTCCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PSSPGFSLSKPTPRGHTALGTPS*LAFLQH
Trigger: GTGCTGCAGGAAGGCAAGGCACGAGGGTGTCCCGAG...AGCCGTGTGTCCTCTGGGGGTGGGCTTTGACAGCGAGAATCCCGGGGACGACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGGGCAAAGGCGGAGGTaGAGACGGAGCGGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: EHSVACSQASGVCQEKKRGQRRR*RRSGSP
Trigger: CGGGCTCCCGCTCCGTCTCCACCTCCGCCTTTGCCC...TCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCGTCGTCCCCGGGATTCTCGCTGTCAAAGCCCACCCCCAGAGGACACACGGCTACACGCGGCTGCTTCTaGAGGGCACGGCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: PSSPGFSLSKPTPRGHTATRGCF*RARLMA
Trigger: AGCCATGAGCCGTGCCCTCCAGAAGCAGCCGCGTGT...AGCCGTGTGTCCTCTGGGGGTGGGCTTTGACAGCGAGAATCCCGGGGACGACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677704.1
CDS-3UTR TCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGAGCTCCCCTGCCCGAGTaGACTTTCACCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGAPLPE*TFTSGM
Trigger: CATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGC...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGCAAACCGGTACAGGCTaGGGGATGCTGCAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: RSLARRPAACARRRRECMQTGTG*GMLQGG
Trigger: ACCGCCCTGCAGCATCCCTCAGCCTGTACCGGTTTG...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGCCCCAACGCTGTAGGTaGGCGAGTCGCGAGTCACCT +
Preference number: 4 (lower is better)
Translates to: RSLARRPAACARRRRECMPQRCR*ASRESP
Trigger: AGGTGACTCGCGACTCGCGCACCTACAGCGTTGGGG...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGTCTGACAGCCCCTTGTaGATCTGCCCGTCGTCCCCG +
Preference number: 4 (lower is better)
Translates to: RSLARRPAACARRRRECMSDSPL*ICPSSP
Trigger: CGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGA...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGGGCTCCGTGCTCCCCTaGAGGCACTGCGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMGSVLP*RHCGVR
Trigger: TCTGACTCCGCAGTGCCTGCAGGGGAGCACGGAGCC...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCATGTCCCGCGGCTCCGTaGTCCCCTGCAGGCACTGCG +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPCPAAP*SPAGTA
Trigger: CGCAGTGCCTGCAGGGGAGCACGGAGCCGCGGGACA...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTCTCCCTCCTCCTCCATaGTGTGACCGCCCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPLPPPP*CDRPAS
Trigger: GGAGGCCGGGCGGTCACAGCATGGAGGAGGAGGGAG...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGCGAGGTTCACGGGCTTaGAGCCACCCAGCAGACACG +
Preference number: 4 (lower is better)
Translates to: RSLARRPAACARRRRECMRGSRA*SHPADT
Trigger: CGTGTCTGCTGGGTGGCTCCAAGCCCGTGAACCTCG...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTACCGCGCCGACTGCCTaGCTCCGTTCTGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATATAPTA*LRSDSP
Trigger: GGGGCTGTCAGAACGGAGCCAGGCAGTCGGCGCGGT...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGGCTCCTGAGTCTGGCTaGCAGGGGCTCACAGACACC +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMAPESG*QGLTDT
Trigger: GGTGTCTGTGAGCCCCTGTCAGCCAGACTCAGGAGC...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGCGGCAGTCTCGTGACTaGACTCGGGGATCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMRQSRD*TRGSRP
Trigger: AGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCG...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACCAGTCGGCAGTCTCGTaGCTGAACTCGGGGATCCCG +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDQSAVS*LNSGIP
Trigger: CGGGATCCCCGAGTTCAGTCACGAGACTGCCGACTG...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCCACCAGCAGCAGGCTaGGCACCGCGCCGACTGCCT +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRPPAAG*APRRLP
Trigger: AGGCAGTCGGCGCGGTGCTCAGCCTGCTGCTGGTGG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGCACACTGGCTCCTTGTaGCCCGATCGCCAACAGGGG +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMHTGSL*PDRQQG
Trigger: CCCCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTG...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACATCCACTGCACACACTaGCGCGTCCTCGGGACACCC +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDIHCTH*RVLGTP
Trigger: GGGTGTCCCGAGGACGCGGCAGTGTGTGCAGTGGAT...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGACATCTGGCAAGCCGATaGATATCGGTTGCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGHLASR*ISVAAR
Trigger: CCGGGCTGCAACCGATATGCATCGGCTTGCCAGATG...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAGAGGGCACGGCTCAGTaGCAGCCTGCGGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTEGTAQ*QPAGPE
Trigger: CTCTGGCCCCGCAGGCTGGCACTGAGCCGTGCCCTC...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356956.6
ENST00000676781.1
CDS-3UTR GCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGGTCCGTCCCTTACCCTaGCGAGGTTCACGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMVRPLP*RGSRAW
Trigger: CCAAGCCCGTGAACCTCGGCAGGGTAAGGGACGGAC...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACAGAACATTCGGTCGCTTaGTCGCAGGCCAGCGGCGTG +
Preference number: 4 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTEHSVA*SQASGV
Trigger: CACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTCTGACAGCCCCTTGTaGATCTGCCCGTCGTCCCCG +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMSDSPL*ICPSSP
Trigger: CGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGA...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGCCCTTCCTTTCCCTaGCGTGGAGGAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMCPSFP*RGGGSW
Trigger: CCAGCTGCCTCCTCCACGGCAGGGAAAGGAAGGGCA...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp TCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATTGCCCTTCCTTTCCCTaGCGTGGAGGAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SVACSQASGVCQEKKRVHCPSFP*RGGGSW
Trigger: CCAGCTGCCTCCTCCACGGCAGGGAAAGGAAGGGCA...ATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGACAGCCACAGCTCCCATaGCCAACCTCCCATCTGGTT +
Preference number: 4 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGQPQLP*PTSHLV
Trigger: AACCAGATGGGAGGTTGGGCATGGGAGCTGTGGCTG...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACACATGCAGTGCCAGCCTaGGGGGCCAGAGACTTGCAG +
Preference number: 4 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTHAVPA*GARDLQ
Trigger: CTGCAAGTCTCTGGCCCCGCAGGCTGGCACTGCATG...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677704.1
CDS-3UTR CCA 90 bp TCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATAGTCCGTCCCGGGGCTaGCCAACATCAAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: SVACSQASGVCQEKKRVHSPSRG*PTSNAW
Trigger: CCAGGCGTTTGATGTTGGCCAGCCCCGGGACGGACT...ATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGACAGGTGTCCTGTGCTTaGGTTGGTGACCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGQVSCA*VGDLAV
Trigger: GACTGCCAGGTCACCAACCCAAGCACAGGACACCTG...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGACCGCGCCGACTGCCTaGCTCCGTTCTGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWETAPTA*LRSDSP
Trigger: GGGGCTGTCAGAACGGAGCCAGGCAGTCGGCGCGGT...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCAACCGCGCCGACTGCCTaGCTCCGTTCTGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPTAPTA*LRSDSP
Trigger: GGGGCTGTCAGAACGGAGCCAGGCAGTCGGCGCGGT...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGGCGTTTCTCACTGGGTaGGAGCTCTCTGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RSLARRPAACARRRRECMAFLTG*ELSAPA
Trigger: AGCTGGGGCAGAGAGCTCCCACCCAGTGAGAAACGC...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCGCTCCTGAGTCTGGCTaGCAGGGGCTCACAGACACC +
Preference number: 4 (lower is better)
Translates to: LLKGIALCVSHWVGALCPAPESG*QGLTDT
Trigger: GGTGTCTGTGAGCCCCTGTCAGCCAGACTCAGGAGC...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACTTCCAGCCAGGTCGGTaGCTTGGCAGTCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDFQPGR*LGSPLE
Trigger: CTCCAGTGGACTGCCAAGTCACCGACCTGGCTGGAA...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGAGGTTCCCGCTTTTCCTaGCATGAGGAGACCACCTTG +
Preference number: 4 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGGSRFS*HEETTL
Trigger: CAAGGTGGTCTCCTCATGTCAGGAAAAGCGGGAACC...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCTGCCCCCTTGGTGCCTaGGAGCAGACAGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPCPLGA*EQTDSS
Trigger: GGAGGAGTCTGTCTGCTCTCAGGCACCAAGGGGGCA...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCGGGACCAGGACCCGGTaGGAGAGGAGAGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTGTRTR*ERRAAA
Trigger: TGCGGCTGCTCTCCTCTCTCACCGGGTCCTGGTCCC...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTACCATCTGCACCTCCTaGGGCTTCACGGCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATATICTS*GFTAQA
Trigger: TGCCTGCGCCGTGAAGCCTCAGGAGGTGCAGATGGT...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCGTCGTCCCCGGGATTCTCGCTGTCAAAGCCCACCCCCAGAGGACACACGGCTCAGAGGACACACGGCTaGGGTGTACCAAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PSSPGFSLSKPTPRGHTAQRTHG*GVPREE
Trigger: CTCTTCTCTTGGTACACCTCAGCCGTGTGTCCTCTG...AGCCGTGTGTCCTCTGGGGGTGGGCTTTGACAGCGAGAATCCCGGGGACGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACTGCCTGGCTCCGTTCTaGCAGCCCCTTGTGCATCTG +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDCLAPF*QPLVHL
Trigger: CAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCA...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACACCCCATGCAGGGAGCTaGGGGCTTTCACTGACTTGG +
Preference number: 4 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTPHAGS*GLSLTW
Trigger: CCAAGTCAGTGAAAGCCCTCAGCTCCCTGCATGGGG...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGATGCAGCCCTCTGTTTTaGGATGCGTCCGGCCTTATG +
Preference number: 4 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGCSPLF*DASGLM
Trigger: CATAAGGCCGGACGCATCTCAAAACAGAGGGCTGCA...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTCACACTGGCTCCTTGTaGCCCGATCGCCAACAGGGG +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPHTGSL*PDRQQG
Trigger: CCCCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTG...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCCTGGAGAGGTCGTACTaGTCCAGCGTGGAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: LLKGIALCVSHWVGALCPLERSY*SSVEGS
Trigger: CGACCCCTCCACGCTGGAGCAGTACGACCTCTCCAG...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCGTCGTCCCCGGGATTCTCGCTGTCAAAGCCCACCCCCAGAGGACACACGGCTCCGATGCATATCGGTTaGAGCCCGGCACTGGATTCA +
Preference number: 4 (lower is better)
Translates to: PSSPGFSLSKPTPRGHTAPMHIG*SPALDS
Trigger: TGAATCCAGTGCCGGGCTGCAACCGATATGCATCGG...AGCCGTGTGTCCTCTGGGGGTGGGCTTTGACAGCGAGAATCCCGGGGACGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACAGGTGGCTGTTCAGCCTaGCCCTGGAGCAGACGAGAT +
Preference number: 4 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTGGCSA*PWSRRD
Trigger: ATCTCGTCTGCTCCAGGGGCAGGCTGAACAGCCACC...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp TCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATCAGGCCAGCGGCGTGTaGCAGGAGAAGAAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: SVACSQASGVCQEKKRVHQASGV*QEKKRV
Trigger: CACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTG...ATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCGCCCGACTGCAAAGGTaGACACCCCAACGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSARLQR*TPQRCR
Trigger: CCTACAGCGTTGGGGTGTGCACCTTTGCAGTCGGGC...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCGTCGTCCCCGGGATTCTCGCTGTCAAAGCCCACCCCCAGAGGACACACGGCTTTGTTCTGGCCCGACTaGAAAGGTGCACACCCCAAC +
Preference number: 4 (lower is better)
Translates to: PSSPGFSLSKPTPRGHTALFWPD*KGAHPN
Trigger: GTTGGGGTGTGCACCTTTGCAGTCGGGCCAGAACAA...AGCCGTGTGTCCTCTGGGGGTGGGCTTTGACAGCGAGAATCCCGGGGACGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCAGGCTCCGTGCTCCCCTaGAGGCACTGCGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPGSVLP*RHCGVR
Trigger: TCTGACTCCGCAGTGCCTGCAGGGGAGCACGGAGCC...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACACTCCCTCCTCCTCCATaGTGTGACCGCCCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTLPPPP*CDRPAS
Trigger: GGAGGCCGGGCGGTCACAGCATGGAGGAGGAGGGAG...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCGCTTCTTCCCGTCGGTaGCACCGCAGAGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSASSRR*HRRGGL
Trigger: AAGACCTCCTCTGCGGTGCCACCGACGGGAAGAAGC...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTCGTACTGCTCCAGCGTaGAGGGGTCGGTCACTACGC +
Preference number: 4 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCRTAPA*RGRSLR
Trigger: GCGTAGTGACCGACCCCTCCACGCTGGAGCAGTACG...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACCCATTCGCCGCGGCTTaGGGACTCATCTGCACCACA +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDPFAAA*GLICTT
Trigger: TGTGGTGCAGATGAGTCCCCAAGCCGCGGCGAATGG...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCGAGGTGGGAATGGCCTaGAGAACAGCCCCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSEVGMA*RTAPWV
Trigger: TACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTC...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCTTCCAGCCAGGTCGGTaGCTTGGCAGTCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPFQPGR*LGSPLE
Trigger: CTCCAGTGGACTGCCAAGTCACCGACCTGGCTGGAA...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GTCACCTATGACACCCAGCTTCTGCGTGTGAACGAGTCCCAGGACCTGGACGTCTGCCCCCTTGGTGCCTaGGAGCAGACAGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: VTYDTQLLRVNESQDLDVCPLGA*EQTDSS
Trigger: GGAGGAGTCTGTCTGCTCTCAGGCACCAAGGGGGCA...GACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGGTGTCATAGGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATCCCGGGAGTCCCAGCTaGAGTAGTAAGTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SVACSQASGVCQEKKRVHPGSPS*SSKCSC
Trigger: ACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGG...ATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTCCCCATGCAGGGAGCTaGGGGCTTTCACTGACTTGG +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPPHAGS*GLSLTW
Trigger: CCAAGTCAGTGAAAGCCCTCAGCTCCCTGCATGGGG...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTGGAAGGAGTGGGGCCTaGCCTCCTTCACCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLGRSGA*PPSPSP
Trigger: GGGAGAGGGTGAAGGAGGTCAGGCCCCACTCCTTCC...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp TCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGGACAAGCCTGTCCTTaGGCACCAGCTTCAGTCCGT +
Preference number: 4 (lower is better)
Translates to: SVACSQASGVCQEKKRVHGQACP*APASVR
Trigger: ACGGACTGAAGCTGGTGCGCAAGGACAGGCTTGTCC...ATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGATGCCATCGCTGGTGGTaGAGGCCGACCCATTCACGT +
Preference number: 4 (lower is better)
Translates to: EHSVACSQASGVCQEKKRCHRWW*RPTHSR
Trigger: ACGTGAATGGGTCGGCCTGCACCACCAGCGATGGCA...TCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGGGTGGGCAGGCATACTaGGTTCGCCACTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: RSLARRPAACARRRRECMGGQAY*VRHSNK
Trigger: CTTGTTTGAGTGGCGAACGCAGTATGCCTGCCCACC...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCAGAACATTCGGTCGCTTaGTCGCAGGCCAGCGGCGTG +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPEHSVA*SQASGV
Trigger: CACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCTGATCGTTGGGCTTCACCTGGCATATGTTGGCTCCAGAGCACGCCGGGTTTCTCTGACAGCCCCTTGTaGATCTGCCCGTCGTCCCCG +
Preference number: 4 (lower is better)
Translates to: ADRWASPGICWLQSTPGFSDSPL*ICPSSP
Trigger: CGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGA...GAAACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGATCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTCTGCCCCAGCTCCCCTaGCCGAGTGAACTTTCACCT +
Preference number: 4 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCLPQLP*PSELSP
Trigger: AGGTGAAAGTTCACTCGGGCAGGGGAGCTGGGGCAG...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGGGCTCCGTGCTCCCCTaGAGGCACTGCGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRGSVLP*RHCGVR
Trigger: TCTGACTCCGCAGTGCCTGCAGGGGAGCACGGAGCC...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGATGTCCCGCGGCTCCGTaGTCCCCTGCAGGCACTGCG +
Preference number: 4 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERCPAAP*SPAGTA
Trigger: CGCAGTGCCTGCAGGGGAGCACGGAGCCGCGGGACA...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACGTACAGGCTGAGGGATaGTGCAGGGCGGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDVQAEG*CRAVCF
Trigger: GAAGCAAACCGCCCTGCAGCATCCCTCAGCCTGTAC...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACGGATGGGCAGGTCCCTaGATATGCCCCTCCTTACAG +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDGWAGP*ICPSLQ
Trigger: CTGTAAGGAGGGGCATATGCAGGGACCTGCCCATCC...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACCCTTCCAGGGCTCTGTaGTCCACCCTGTCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDPSRAL*STLSLA
Trigger: TGCTAGAGACAGGGTGGAGCACAGAGCCCTGGAAGG...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGAGGGCAAAGGCGGAGGTaGAGACGGAGCGGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERGQRRR*RRSGSP
Trigger: CGGGCTCCCGCTCCGTCTCCACCTCCGCCTTTGCCC...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCACGTACTGCTCCAGCGTaGAGGGGTCGGTCACTACGC +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPRTAPA*RGRSLR
Trigger: GCGTAGTGACCGACCCCTCCACGCTGGAGCAGTACG...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCTCTGTCTGCCATCGCTaGTGGTGCAGGCCGACCCAT +
Preference number: 4 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPSVCHR*WCRPTH
Trigger: ATGGGTCGGCCTGCACCACCAGCGATGGCAGACAGA...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCGTCGTCCCCGGGATTCTCGCTGTCAAAGCCCACCCCCAGAGGACACACGGCTTCCGACTGGCCTTGCTaGCTTCCAATTCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PSSPGFSLSKPTPRGHTASDWPC*LPILEL
Trigger: GAGCTCAAGAATTGGAAGCCAGCAAGGCCAGTCGGA...AGCCGTGTGTCCTCTGGGGGTGGGCTTTGACAGCGAGAATCCCGGGGACGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCGCTCGTTGCTCTTCATaGGACAGGCTGTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSARCSS*DRLWLW
Trigger: CCACAGCCACAGCCTGTCCCATGAAGAGCAACGAGC...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACGCTCGTTGCTCTTCATaGGACAGGCTGTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDARCSS*DRLWLW
Trigger: CCACAGCCACAGCCTGTCCCATGAAGAGCAACGAGC...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTGCCTATTGGTTGGCCTaGCCTCAGGCCTGCACACGA +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATAAYWLA*PQACTR
Trigger: TCGTGTGCAGGCCTGAGGCCAGGCCAACCAATAGGC...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCATGGGCCTATTGGTTaGCCTGGCCTCAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPHGPIG*PGLRPA
Trigger: TGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCATG...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACACGAGTCCCAGGACCTaGACGTCACCAGTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDTSPRT*TSPVVV
Trigger: GACCACAACTGGTGACGTCCAGGTCCTGGGACTCGT...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATTCACCTGGCATATGTTaGCTCCAGAGCACGCCGGGT +
Preference number: 4 (lower is better)
Translates to: SVACSQASGVCQEKKRVHSPGIC*LQSTPG
Trigger: ACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGA...ATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACCGTGGAGGAGGCAGCTaGATCTCTTCCATCAGCCAC +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDRGGGS*ISSISH
Trigger: GTGGCTGATGGAAGAGATCCAGCTGCCTCCTCCACG...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCTTGGGGCAAAACCCTaGGCACAAGGTACCGCCCTG +
Preference number: 4 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPLGAKP*AQGTAL
Trigger: CAGGGCGGTACCTTGTGCCCAGGGTTTTGCCCCAAG...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCAGCAGGAGGTGGGAATaGCCTGGAGAACAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPSRRWE*PGEQPP
Trigger: AGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGCT...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCTGGGATGGGGCTGAGTaGCACCAGATGACCTCACCT +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSWDGAE*HQMTSP
Trigger: AGGTGAGGTCATCTGGTGCCACTCAGCCCCATCCCA...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATCAAGGCTGCTTTCTCTaGGATGGGGCTGAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: SVACSQASGVCQEKKRVHQGCFL*DGAEWH
Trigger: GTGCCACTCAGCCCCATCCCAGAGAAAGCAGCCTTG...ATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTCCTAAAGCCGCTGGGTaGGGCAGGGCAAATCAGGCA +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATAPKAAG*GRANQA
Trigger: TGCCTGATTTGCCCTGCCCCACCCAGCGGCTTTAGG...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGGAATTTCCCAGTGGATaGTCACAGGCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RSLARRPAACARRRRECMEFPSG*SQATSS
Trigger: GGAGCTGGTGGCCTGTGACCATCCACTGGGAAATTC...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CAA 72 bp TGCTCCGGGTCCCCCGTCCCAGTGATGGCTTCCCAGTaGTCACTGTACCTTGACAGGGACGAGAGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: CSGSPVPVMASQ*SLYLDRDERSK
Trigger: CTTCGACCTCTCGTCCCTGTCAAGGTACAGTGACAACTGGGAAGCCATCACTGGGACGGGGGACCCGGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR TCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACGAGCACACTCAAACGTaGTCCTGGTGGAGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDEHTQT*SWWRSA
Trigger: AGCGCTTCTCCACCAGGATCACGTTTGAGTGTGCTC...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGAGCACACTCAAACGTaGTCCTGGTGGAGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: SVACSQASGVCQEKKRVHEHTQT*SWWRSA
Trigger: AGCGCTTCTCCACCAGGATCACGTTTGAGTGTGCTC...ATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTTGTCCCCTTCCACTCTaGCAACGGGACAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCCPLPL*QRDRLP
Trigger: TGGAAGCCTGTCCCGTTGTCAGAGTGGAAGGGGACA...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CACAGCCAGAAGCAGGTTTTCCCAGGATGGTCCCACAGACAGGCATTGTGCCGCTCACGATGGTGTCGTTaGGGCCCAGGGGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: HSQKQVFPGWSHRQALCRSRWCR*GPGASG
Trigger: ACCTGAAGCCCCTGGGCCTCAACGACACCATCGTGA...GCGGCACAATGCCTGTCTGTGGGACCATCCTGGGAAAACCTGCTTCTGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR TCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCGGTTCCCGCTTTTCCTaGCATGAGGAGACCACCTTG +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVGSRFS*HEETTL
Trigger: CAAGGTGGTCTCCTCATGTCAGGAAAAGCGGGAACC...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGGGTCCCCCGTCCCAGTaGTGGCTTCCCAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRGPPSQ*WLPSCH
Trigger: GTGACAACTGGGAAGCCATCACTGGGACGGGGGACC...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCCTGTGCTTGGGTTGGTaGCCTGGCAGTCATCATGCT +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVLCLGW*PGSHHA
Trigger: AGCATGATGACTGCCAGGTCACCAACCCAAGCACAG...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTCCCAGCTTCTGCGTGTaGACGAGTCCCAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLPSFCV*TSPRTW
Trigger: CCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGG...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGCCCAGCTTCTGCGTGTaGACGAGTCCCAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQPSFCV*TSPRTW
Trigger: CCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGG...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCTTCCGACTGAAGTGCTaGTCGTTGGGCTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSFRLKC*SLGFTW
Trigger: CCAGGTGAAGCCCAACGATCAGCACTTCAGTCGGAA...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCGGCAGTCTCGTGACTaGACTCGGGGATCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRRQSRD*TRGSRP
Trigger: AGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACACAGTCGGCAGTCTCGTaGCTGAACTCGGGGATCCCG +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTQSAVS*LNSGIP
Trigger: CGGGATCCCCGAGTTCAGTCACGAGACTGCCGACTG...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCATCGTCCTCACGCTCCTaGAGGGCATTGCTCTGTGCG +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPSSSRS*RALLCA
Trigger: CGCACAGAGCAATGCCCTTCAGGAGCGTGAGGACGA...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGTCGTCCTCACGCTCCTaGAGGGCATTGCTCTGTGCG +
Preference number: 4 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLSSSRS*RALLCA
Trigger: CGCACAGAGCAATGCCCTTCAGGAGCGTGAGGACGA...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCAGCTGCCCCATACACTaGCAGCCTCACCATCTCAAG +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVSCPIH*QPHHLK
Trigger: CTTGAGATGGTGAGGCTGTCAGTGTATGGGGCAGCT...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTCAAACCGGTACAGGCTaGGGGATGCTGCAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISAQTGTG*GMLQGG
Trigger: ACCGCCCTGCAGCATCCCTCAGCCTGTACCGGTTTG...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGCACACTGGCTCCTTGTaGCCCGATCGCCAACAGGGG +
Preference number: 4 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRHTGSL*PDRQQG
Trigger: CCCCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTG...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGAATGAGTGTACCTCCCTaGGCCATGGGATTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGMSVPP*AMGFFR
Trigger: TCTGAAGAATCCCATGGCTCAGGGAGGTACACTCAT...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCACCACGACTGCCCGTTaGCCCCATTCTCACAGAACA +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVTTTAR*PHSHRT
Trigger: TGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGT...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTGCCTCGCAGGCAGTCTaGGGCTTCTCAGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLASQAV*GFSAQH
Trigger: GTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGC...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTGCCTCGCAGGCAGTCTaGGGCTTCTCAGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISAASQAV*GFSAQH
Trigger: GTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGC...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTGGCAGGAGAATCCCTTaGACCCGGGAGGCAGAGATT +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPGRRIP*TREAEI
Trigger: AATCTCTGCCTCCCGGGTTCAAGGGATTCTCCTGCC...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCGTCGTCCCCGGGATTCTCGCTGTCAAAGCCCACCCCCAGAGGACACACGGCTCACACAGGAAGGCAATaGTGCTCTGGACTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: PSSPGFSLSKPTPRGHTAHTGRQ*CSGLCD
Trigger: ATCACAGAGTCCAGAGCAGCATTGCCTTCCTGTGTG...AGCCGTGTGTCCTCTGGGGGTGGGCTTTGACAGCGAGAATCCCGGGGACGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTGACACCCTCGTGCCTTaGCTTCCTGCAGCACTCTGT +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATADTLVP*LPAALC
Trigger: ACAGAGTGCTGCAGGAAGGCAAGGCACGAGGGTGTC...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACACTCGGGACACCCTCGTaGCTTGCCTTCCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTLGTPS*LAFLQH
Trigger: GTGCTGCAGGAAGGCAAGGCACGAGGGTGTCCCGAG...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTATCCACTGCACACACTaGCGCGTCCTCGGGACACCC +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPIHCTH*RVLGTP
Trigger: GGGTGTCCCGAGGACGCGGCAGTGTGTGCAGTGGAT...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGATCCATTTTTATCCACTaGACACACTGCCGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGSIFIH*THCRVL
Trigger: GAGGACGCGGCAGTGTGTGCAGTGGATAAAAATGGA...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCGCTTGGGGACTCATCTaGACCACACCCAGATTCCAG +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVAWGLI*TTPRFQ
Trigger: CTGGAATCTGGGTGTGGTGCAGATGAGTCCCCAAGC...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAGTCCGTCCCTTACCCTaGCGAGGTTCACGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTVRPLP*RGSRAW
Trigger: CCAAGCCCGTGAACCTCGGCAGGGTAAGGGACGGAC...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTGAACATTCGGTCGCTTaGTCGCAGGCCAGCGGCGTG +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLEHSVA*SQASGV
Trigger: CACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTCCCCAACGCTGTAGGTaGGCGAGTCGCGAGTCACCT +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLPQRCR*ASRESP
Trigger: AGGTGACTCGCGACTCGCGCACCTACAGCGTTGGGG...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACATTGTTCTGGCCCGACTaGAAAGGTGCACACCCCAAC +
Preference number: 4 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTLFWPD*KGAHPN
Trigger: GTTGGGGTGTGCACCTTTGCAGTCGGGCCAGAACAA...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCGTCGTCCCCGGGATTCTCGCTGTCAAAGCCCACCCCCAGAGGACACACGGCTCAGTTGTGGTCCTTCTaGAAATGCTGGCCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: PSSPGFSLSKPTPRGHTAQLWSF*KCWPFQ
Trigger: CTGAAAGGGCCAGCATTTGCAGAAGGACCACAACTG...AGCCGTGTGTCCTCTGGGGGTGGGCTTTGACAGCGAGAATCCCGGGGACGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGAGCCCCTTGTGCATCTaGCCGTCGTCCCCGGGATTC +
Preference number: 4 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRSPLCI*PSSPGF
Trigger: GAATCCCGGGGACGACGGGCAGATGCACAAGGGGCT...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTTGCCCTTCCTTTCCCTaGCGTGGAGGAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLCPSFP*RGGGSW
Trigger: CCAGCTGCCTCCTCCACGGCAGGGAAAGGAAGGGCA...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGGGCTCCGTGCTCCCCTaGAGGCACTGCGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLGSVLP*RHCGVR
Trigger: TCTGACTCCGCAGTGCCTGCAGGGGAGCACGGAGCC...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGGGTACATCACACCCCTaGTGGCAGGAAGAAACGGTG +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMGTSHP*WQEETV
Trigger: CACCGTTTCTTCCTGCCAGCAGGGGTGTGATGTACC...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTCAGCATGAGGCCAAGTaGAATGCTAGGGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPQHEAK*NARAEA
Trigger: AGCCTCGGCCCTAGCATTGCACTTGGCCTCATGCTG...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGACAGGCTGAGGGATGCTaGAGGGCGGTTTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: EHSVACSQASGVCQEKKRQAEGC*RAVCFS
Trigger: TGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG...TCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCGCCCCCTGGGTAGAATaGCTGAGGACCAGCATCTTT +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVAPWVE*LRTSIF
Trigger: AAAGATGCTGGTCCTCAGGCATTCTACCCAGGGGGC...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGCAGGTCCCTGCATATaGCCCTCCTTACAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCAGPCI*PSLQRG
Trigger: CCCTCTCTGTAAGGAGGGGCATATGCAGGGACCTGC...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCGGATGGGCAGGTCCCTaGATATGCCCCTCCTTACAG +
Preference number: 4 (lower is better)
Translates to: LLKGIALCVSHWVGALCPGWAGP*ICPSLQ
Trigger: CTGTAAGGAGGGGCATATGCAGGGACCTGCCCATCC...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCGCTATCTTGCCGCCTTaGACACAAGCTCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSAILPP*TQAHLH
Trigger: GTGCAGGTGAGCTTGTGTGCAAGGCGGCAAGATAGC...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTCCAGCATCCCAAGGCTaGTTTCTCTGGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCPASQG*FLWDGA
Trigger: AGCCCCATCCCAGAGAAAGCAGCCTTGGGATGCTGG...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTCCAGCATCCCAAGGCTaGTTTCTCTGGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPPASQG*FLWDGA
Trigger: AGCCCCATCCCAGAGAAAGCAGCCTTGGGATGCTGG...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGGGGTTGGTCTTGCTGTaGCAAGGGTGCCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEGLVLL*QGCQRW
Trigger: CCACCTCTGGCACCCTTGGCACAGCAAGACCAACCC...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGATCTTGCAGGCTGCAGTaGTCCTCCACTCAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGSCRLQ*SSTQSS
Trigger: ACTACTTTGAGTGGAGGACCACTGCAGCCTGCAAGA...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACGATGAACCTCCGCTCTaGGCAAGTGGTGTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDDEPPL*ASGVRS
Trigger: AGACCTCACACCACTTGCCCAGAGCGGAGGTTCATC...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCTGCTCTGGTTCTGCATaGCGGACCAGCGCGGACAGG +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTCSGSA*RTSADR
Trigger: CCTGTCCGCGCTGGTCCGCCATGCAGAACCAGAGCA...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGTGCTCTGGTTCTGCATaGCGGACCAGCGCGGACAGG +
Preference number: 4 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQCSGSA*RTSADR
Trigger: CCTGTCCGCGCTGGTCCGCCATGCAGAACCAGAGCA...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTCACTTTTTGCCACCTaGCAGGCTCCTGAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMSLFAT*QAPESG
Trigger: GCCAGACTCAGGAGCCTGCCAGGTGGCAAAAAGTGA...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356956.6
ENST00000677704.1
CDS-3UTR CCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGCATCAGCGGTACCTTTaGCAGAGAGAGGCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: RSLARRPAACARRRRECMHQRYL*QREALC
Trigger: ACAAAGGGCCTCTCTCTGCCAAAGGTACCGCTGATG...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCACCATTCGCCGCGGCTTaGGGACTCATCTGCACCACA +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPPFAAA*GLICTT
Trigger: TGTGGTGCAGATGAGTCCCCAAGCCGCGGCGAATGG...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGACTGGTGGAGAAGCGCTaGTTCCCACACTTGTCACCG +
Preference number: 4 (lower is better)
Translates to: EHSVACSQASGVCQEKKRLVEKR*FPHLSP
Trigger: CGGTGACAAGTGTGGGAACCAGCGCTTCTCCACCAG...TCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTACACGCGGCTGCTTCTaGAGGGCACGGCTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSTRGCF*RARLSA
Trigger: GGCACTGAGCCGTGCCCTCCAGAAGCAGCCGCGTGT...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356956.6
ENST00000676781.1
CDS-3UTR CCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTCGAGGTTCACGGGCTTaGAGCCACCCAGCAGACACG +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISARGSRA*SHPADT
Trigger: CGTGTCTGCTGGGTGGCTCCAAGCCCGTGAACCTCG...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGGCCTATTGGTTGGCCTaGCCTCAGGCCTGCACACGA +
Preference number: 4 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLAYWLA*PQACTR
Trigger: TCGTGTGCAGGCCTGAGGCCAGGCCAACCAATAGGC...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCACGAGTCCCAGGACCTaGACGTCACCAGTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: LLKGIALCVSHWVGALCPTSPRT*TSPVVV
Trigger: GACCACAACTGGTGACGTCCAGGTCCTGGGACTCGT...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCAGCGTTTCTCACTGGGTaGGAGCTCTCTGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPAFLTG*ELSAPA
Trigger: AGCTGGGGCAGAGAGCTCCCACCCAGTGAGAAACGC...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTTTGGTTGGAGGTGCTTaGCTGTCCCGCGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLLVGGA*LSRGSV
Trigger: CACGGAGCCGCGGGACAGCCAAGCACCTCCAACCAA...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTAGACAGGCAGGCAGATaGGTAACTCGCTCGGGAACG +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATARQAGR*VTRSGT
Trigger: CGTTCCCGAGCGAGTTACCCATCTGCCTGCCTGTCT...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTTGGAGAACAGCCCCCTaGGTAGAATGCCTGAGGACC +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATAWRTAP*VECLRT
Trigger: GGTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCA...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGACTCAAAAGCCCAATCTaGCCCTCCTACAGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGLKSPI*PSYSSQ
Trigger: TTGAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAG...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCGCCCAACCTCCCATCTaGTTGCTGAAGCGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSAQPPI*LLKRLH
Trigger: ATGGAGACGCTTCAGCAACCAGATGGGAGGTTGGGC...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGCCTAAAGCCGCTGGGTaGGGCAGGGCAAATCAGGCA +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEPKAAG*GRANQA
Trigger: TGCCTGATTTGCCCTGCCCCACCCAGCGGCTTTAGG...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACGAATTTCCCAGTGGATaGTCACAGGCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDEFPSG*SQATSS
Trigger: GGAGCTGGTGGCCTGTGACCATCCACTGGGAAATTC...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATCTCCGTGGGAGCCTCTaGAAAACAACAGAACCTCGC +
Preference number: 4 (lower is better)
Translates to: SVACSQASGVCQEKKRVHLRGSL*KTTEPR
Trigger: GCGAGGTTCTGTTGTTTTCCAGAGGCTCCCACGGAG...ATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATACCCAGCATGCTCCGTaGGAGCCTCTGGAAAACAAC +
Preference number: 4 (lower is better)
Translates to: SVACSQASGVCQEKKRVHTQHAP*EPLENN
Trigger: GTTGTTTTCCAGAGGCTCCCACGGAGCATGCTGGGT...ATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGCATACAAACAGCACTTaGTGGCCCGCACTGGACAAT +
Preference number: 4 (lower is better)
Translates to: RSLARRPAACARRRRECMHTNST*WPALDN
Trigger: ATTGTCCAGTGCGGGCCATCAAGTGCTGTTTGTATG...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCTCTGGGCAAGTGGTGTaGGGTCTATGGAGACATCCT +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVSGQVV*GLWRHP
Trigger: AGGATGTCTCCATAGACCTCACACCACTTGCCCAGA...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATTCTGGGCAAGTGGTGTaGGGTCTATGGAGACATCCT +
Preference number: 4 (lower is better)
Translates to: SVACSQASGVCQEKKRVHSGQVV*GLWRHP
Trigger: AGGATGTCTCCATAGACCTCACACCACTTGCCCAGA...ATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGAGAATATCGGAGGGTCTaGTTGTGGTATCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGEYRRV*LWYLPA
Trigger: AGCAGGAAGATACCACAATCAGACCCTCCGATATTC...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTCCGTCCAAGGTTTCCTaGCTGTGCTTAGGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATAPSKVS*LCLGQS
Trigger: TGACTGGCCTAAGCACAGTCAGGAAACCTTGGACGG...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCGGTGAGCCCGATATCTaGGCACACTCAAACGTGATC +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSGEPDI*AHSNVI
Trigger: GATCACGTTTGAGTGTGCTCAGATATCGGGCTCACC...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGGGTCCCCCGTCCCAGTaGTGGCTTCCCAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLGPPSQ*WLPSCH
Trigger: GTGACAACTGGGAAGCCATCACTGGGACGGGGGACC...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCGTCGTCCCCGGGATTCTCGCTGTCAAAGCCCACCCCCAGAGGACACACGGCTGCCTGCACACGAAACTaGTCACACTCTTATAGCTCA +
Preference number: 4 (lower is better)
Translates to: PSSPGFSLSKPTPRGHTAACTRN*SHSYSS
Trigger: TGAGCTATAAGAGTGTGATCAGTTTCGTGTGCAGGC...AGCCGTGTGTCCTCTGGGGGTGGGCTTTGACAGCGAGAATCCCGGGGACGACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACAACACCTCTCTTACAGTaGAACGCGATGAGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTTPLLQ*NAMSEV
Trigger: CACCTCGCTCATCGCGTTTCACTGTAAGAGAGGTGT...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTTGCCTGGCTCCGTTCTaGCAGCCCCTTGTGCATCTG +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLCLAPF*QPLVHL
Trigger: CAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCA...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGGCTGAGGGCTTTCACTaGCTTGGTGGTAATATGGCC +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMAEGFH*LGGNMA
Trigger: GGCCATATTACCACCAAGTCAGTGAAAGCCCTCAGC...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTCCCCATGCAGGGAGCTaGGGGCTTTCACTGACTTGG +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPPHAGS*GLSLTW
Trigger: CCAAGTCAGTGAAAGCCCTCAGCTCCCTGCATGGGG...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTTGCAGCCCTCTGTTTTaGGATGCGTCCGGCCTTATG +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPCSPLF*DASGLM
Trigger: CATAAGGCCGGACGCATCTCAAAACAGAGGGCTGCA...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTACCACGACTGCCCGTTaGCCCCATTCTCACAGAACA +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATATTTAR*PHSHRT
Trigger: TGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGT...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCAGCAGTCCTCAGCACTaGTTTACCCTGGGCCATACT +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSSSPQH*FTLGHT
Trigger: AGTATGGCCCAGGGTAAATCAGTGCTGAGGACTGCT...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677704.1
CDS-3UTR GCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGACAGCTTCCCAATTCTaGTCTGGTTCTGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMTASQF*SGSAWR
Trigger: CCGCCATGCAGAACCAGAGCAGAATTGGGAAGCTGT...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTCTCGGGACACCCTCGTaGCTTGCCTTCCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPLGTPS*LAFLQH
Trigger: GTGCTGCAGGAAGGCAAGGCACGAGGGTGTCCCGAG...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCCACCGGGCCGGTCTTTaGCATTCCCAAGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVHRAGL*HSQVTD
Trigger: ATCAGTAACTTGGGAATGGCAAAGACCGGCCCGGTG...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATGGTCAGAACCTCATCCTGGTGGCTGTTCAGCCTaGCCCTGGAGCAGACGAGAT +
Preference number: 4 (lower is better)
Translates to: QLPCPSELSPLGWSEPHPGGCSA*PWSRRD
Trigger: ATCTCGTCTGCTCCAGGGGCAGGCTGAACAGCCACC...AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CACAGCCAGAAGCAGGTTTTCCCAGGATGGTCCCACAGACAGGCATTGTGCCGCATACTGGCCGCTGGGTaGCGCGGTCACAGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: HSQKQVFPGWSHRQALCRILAAG*RGHSRR
Trigger: TCTTCTACTGTGACCGCGGCACCCAGCGGCCAGTAT...GCGGCACAATGCCTGTCTGTGGGACCATCCTGGGAAAACCTGCTTCTGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR GCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTGGTGGGCAGGCATACTaGGTTCGCCACTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATAGGQAY*VRHSNK
Trigger: CTTGTTTGAGTGGCGAACGCAGTATGCCTGCCCACC...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACTCCTTGTACACCAGCTaGAGGACCTGGTCCACGTAT +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDSLYTS*RTWSTY
Trigger: ATACGTGGACCAGGTCCTGCAGCTGGTGTACAAGGA...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCAGGCCAGCGGCGTGTaGCAGGAGAAGAAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRQASGV*QEKKRV
Trigger: CACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTCAGGCCAGCGGCGTGTaGCAGGAGAAGAAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPQASGV*QEKKRV
Trigger: CACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTG...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACAGCTGTTTGAGTGTCTaGAGAAGCCCCACTCGTGGT +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDSCLSV*RSPTRG
Trigger: ACCACGAGTGGGGCTTCTGCAGACACTCAAACAGCT...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTAGCCCCTTGTGCATCTaGCCGTCGTCCCCGGGATTC +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSSPLCI*PSSPGF
Trigger: GAATCCCGGGGACGACGGGCAGATGCACAAGGGGCT...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCAAGGGCATTGCTCTGTaGGTTTCTCACTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVKGIAL*VSHWVG
Trigger: TCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTT...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGCACTGTCTTCTGCTGTaGAGAGCTGGACTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: RSLARRPAACARRRRECMHCLLL*RAGLPF
Trigger: AAAGGGAAGTCCAGCTCTGCACAGCAGAAGACAGTG...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCCTCCCTCCTCCTCCATaGTGTGACCGCCCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTLPPPP*CDRPAS
Trigger: GGAGGCCGGGCGGTCACAGCATGGAGGAGGAGGGAG...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGCAGGCTGAGGGATGCTaGAGGGCGGTTTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEQAEGC*RAVCFS
Trigger: TGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGAACTGGAGTAACTTCCTaGTTCCATGCAGGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGTGVTS*FHAGSS
Trigger: AGAGCTACCTGCATGGAAGCAGGAAGTTACTCCAGT...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGCCCCCTGGGTAGAATaGCTGAGGACCAGCATCTTT +
Preference number: 4 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCAPWVE*LRTSIF
Trigger: AAAGATGCTGGTCCTCAGGCATTCTACCCAGGGGGC...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCAGGATGGGCAGGTCCCTaGATATGCCCCTCCTTACAG +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPGWAGP*ICPSLQ
Trigger: CTGTAAGGAGGGGCATATGCAGGGACCTGCCCATCC...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCGCAGGCAGCCAGTGGTaGAGACAACATGCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVAGSQW*RQHAFL
Trigger: CAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGC...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACGCAGGCAGCCAGTGGTaGAGACAACATGCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDAGSQW*RQHAFL
Trigger: CAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGC...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGCACCTGCACCACGACTaGCCGTTGACCCCATTCTCA +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEHLHHD*PLTPFS
Trigger: TGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTG...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCGCCTACCTGGAGGCCTaGTGGCCATTTTCTATTGTG +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVAYLEA*WPFSIV
Trigger: CACAATAGAAAATGGCCAGCAGGCCTCCAGGTAGGC...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACGCCTACCTGGAGGCCTaGTGGCCATTTTCTATTGTG +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDAYLEA*WPFSIV
Trigger: CACAATAGAAAATGGCCAGCAGGCCTCCAGGTAGGC...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp TGCCTCACAGCCAGAAGCAGGTTTTCCCAGGATGGTCCCACAGACAGGCATTGTGAACCAGGCCCGGGCTaGAGACCACAGGAACCCACA +
Preference number: 4 (lower is better)
Translates to: CLTARSRFSQDGPTDRHCEPGPG*RPQEPT
Trigger: TGTGGGTTCCTGTGGTCTGCAGCCCGGGCCTGGTTC...ACAATGCCTGTCTGTGGGACCATCCTGGGAAAACCTGCTTCTGGCTGTGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR CCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCCCAACATCAAACGCCTaGTGTCCTCTTACCAGGCAG +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSPTSNA*CPLTRQ
Trigger: CTGCCTGGTAAGAGGACACCAGGCGTTTGATGTTGG...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCGCTTCTTCCCGTCGGTaGCACCGCAGAGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTASSRR*HRRGGL
Trigger: AAGACCTCCTCTGCGGTGCCACCGACGGGAAGAAGC...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TGCCTCACAGCCAGAAGCAGGTTTTCCCAGGATGGTCCCACAGACAGGCATTGTTGCTCTGGTTCTGCATaGCGGACCAGCGCGGACAGG +
Preference number: 4 (lower is better)
Translates to: CLTARSRFSQDGPTDRHCCSGSA*RTSADR
Trigger: CCTGTCCGCGCTGGTCCGCCATGCAGAACCAGAGCA...ACAATGCCTGTCTGTGGGACCATCCTGGGAAAACCTGCTTCTGGCTGTGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR CCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTGTTGCAGCCCGGCACTaGATTCAGAGGCCGACACAC +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLVAARH*IQRPTH
Trigger: GTGTGTCGGCCTCTGAATCCAGTGCCGGGCTGCAAC...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGTCTGCCATCGCTGGTaGTGCAGGCCGACCCATTCA +
Preference number: 4 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQVCHRW*CRPTHS
Trigger: TGAATGGGTCGGCCTGCACCACCAGCGATGGCAGAC...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTCTGTCTGCCATCGCTaGTGGTGCAGGCCGACCCAT +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPSVCHR*WCRPTH
Trigger: ATGGGTCGGCCTGCACCACCAGCGATGGCAGACAGA...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCTCCTCGTGGTATATGTaGTCTGTCTGCCATCGCTGG +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVSSWYM*SVCHRW
Trigger: CCAGCGATGGCAGACAGACCACATATACCACGAGGA...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGACTTATAGAGCAAGCCTaGTCTGTATCCGTCGTTGTC +
Preference number: 4 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGLIEQA*SVSVVV
Trigger: GACAACGACGGATACAGACCAGGCTTGCTCTATAAG...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACAATGAGGAGACCACCTTaGACTTGTCACTTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTMRRPP*TCHLWG
Trigger: GCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCAT...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTCATGGGCCTATTGGTTaGCCTGGCCTCAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISAHGPIG*PGLRPA
Trigger: TGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCATG...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACTGGATTGAGTATTGGTaGTCCTGCTACCCGGCCGAT +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDWIEYW*SCYPAD
Trigger: ATCGGCCGGGTAGCAGGACCACCAATACTCAATCCA...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCGGTAGTTGTCCCCATTaGTCCTCATGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPGSCPH*SSCPQR
Trigger: CCTCTGGGGACATGAGGACCAATGGGGACAACTACC...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTCTGTGCGTTTCTCACTaGGTGGGAGCTCTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPLCVSH*VGALCP
Trigger: GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAG...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCGGAAGGACACCAGCTTaGTGGAGCTCACTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVGRTPA*WSSLSS
Trigger: AGAAGACAGTGAGCTCCACCAAGCTGGTGTCCTTCC...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CATGAGGAGACCACCTTGGACTTGTCACTTGTGGGGCAGACGTCTGAGGAAAGCTTGGTTGGAGGTGCTTaGCTGTCCCGCGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: HEETTLDLSLVGQTSEESLVGGA*LSRGSV
Trigger: CACGGAGCCGCGGGACAGCCAAGCACCTCCAACCAA...GCTTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR CCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTACAATCAGGAAGGAGTaGGGCCTGACCTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCTIRKE*GLTSFT
Trigger: GGTGAAGGAGGTCAGGCCCCACTCCTTCCTGATTGT...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCCTAGGGCCGAGGCTCTaGCCCATGATTTTTCATGCA +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVLGPRL*PMIFHA
Trigger: TGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAG...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CACAGCCAGAAGCAGGTTTTCCCAGGATGGTCCCACAGACAGGCATTGTGCCGCTGGAGAACAGCCCCCTaGGTAGAATGCCTGAGGACC +
Preference number: 4 (lower is better)
Translates to: HSQKQVFPGWSHRQALCRWRTAP*VECLRT
Trigger: GGTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCA...GCGGCACAATGCCTGTCTGTGGGACCATCCTGGGAAAACCTGCTTCTGGCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR CCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGGAGGTGGGAATGGCCTaGAGAACAGCCCCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCREVGMA*RTAPWV
Trigger: TACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTC...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCGAGGTGGGAATGGCCTaGAGAACAGCCCCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTEVGMA*RTAPWV
Trigger: TACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTC...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTAGCTTACCAAGGGGATaGGCAGGTCCCTGCATATGC +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATASLPRG*AGPCIC
Trigger: GCATATGCAGGGACCTGCCCATCCCCTTGGTAAGCT...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGATACCTCCCTGAGCCATaGGATTCTTCAGAGTCAGTA +
Preference number: 4 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGYLPEP*DSSESV
Trigger: TACTGACTCTGAAGAATCCCATGGCTCAGGGAGGTA...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTGCCCAACCTCCCATCTaGTTGCTGAAGCGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATAAQPPI*LLKRLH
Trigger: ATGGAGACGCTTCAGCAACCAGATGGGAGGTTGGGC...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCCCACCATCACTTCTTaGTTGTCACCGAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPPTITS*LSPRPA
Trigger: TGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGG...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGCCTAAAGCCGCTGGGTaGGGCAGGGCAAATCAGGCA +
Preference number: 4 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQPKAAG*GRANQA
Trigger: TGCCTGATTTGCCCTGCCCCACCCAGCGGCTTTAGG...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGAATTTCCCAGTGGATaGTCACAGGCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCEFPSG*SQATSS
Trigger: GGAGCTGGTGGCCTGTGACCATCCACTGGGAAATTC...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTCTCCGTGGGAGCCTCTaGAAAACAACAGAACCTCGC +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPLRGSL*KTTEPR
Trigger: GCGAGGTTCTGTTGTTTTCCAGAGGCTCCCACGGAG...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACCATACAAACAGCACTTaGTGGCCCGCACTGGACAAT +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDHTNST*WPALDN
Trigger: ATTGTCCAGTGCGGGCCATCAAGTGCTGTTTGTATG...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTATGACGCTCATCCGCTaGAACCCTGAGCTGCATTCA +
Preference number: 4 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCMTLIR*NPELHS
Trigger: TGAATGCAGCTCAGGGTTTCAGCGGATGAGCGTCAT...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGATTCCGTGTCCCATGTaGAGAAGTAGGTGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: RSLARRPAACARRRRECMIPCPM*RSRCSQ
Trigger: TTGACTGCACCTACTTCTTCACATGGGACACGGAAT...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGGAGTTATCCTCTTCCTaGTATTCAGGGAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: RSLARRPAACARRRRECMELSSS*YSGKPT
Trigger: AGTGGGCTTCCCTGAATATCAGGAAGAGGATAACTC...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTCGTGACATGTTCCCCTaGGTTGTCCATGGCATACCA +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPRDMFP*VVHGIP
Trigger: TGGTATGCCATGGACAACTCAGGGGAACATGTCACG...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GCTGATCGTTGGGCTTCACCTGGCATATGTTGGCTCCAGAGCACGCCGGGTTTCGTATCCGTCGTTGTCTaGATGGGACAGGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: ADRWASPGICWLQSTPGFVSVVV*MGQAAS
Trigger: AGAGGCTGCCTGTCCCATTCAGACAACGACGGATAC...GAAACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGATCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCTGTCCCCTTCCACTCTaGCAACGGGACAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTCPLPL*QRDRLP
Trigger: TGGAAGCCTGTCCCGTTGTCAGAGTGGAAGGGGACA...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGTCACGATGGTGTCGTTaGGGCCCAGGGGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLSRWCR*GPGASG
Trigger: ACCTGAAGCCCCTGGGCCTCAACGACACCATCGTGA...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGAGACCTGCCACTTTGTaGAATCCCTGCGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRRPATL*NPCGSR
Trigger: GCGGGAACCGCAGGGATTTCACAAAGTGGCAGGTCT...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTGTTGTCACTGTACCTTaGCAGGGACGAGAGGTCGAA +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPVVTVP*QGREVE
Trigger: TTCGACCTCTCGTCCCTGTCAAGGTACAGTGACAAC...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCGGCTCTCGCTGCAGGTaGATCGGATGGTGGTTGACT +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTGSRCR*IGWWLT
Trigger: AGTCAACCACCATCCGATTCACCTGCAGCGAGAGCC...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCGCTGTAAGCAGCTGTaGATCCCGCCCTGCCACTTA +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRRCKQL*IPPCHL
Trigger: TAAGTGGCAGGGCGGGATTCACAGCTGCTTACAGCG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTCGCTGTAAGCAGCTGTaGATCCCGCCCTGCCACTTA +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPRCKQL*IPPCHL
Trigger: TAAGTGGCAGGGCGGGATTCACAGCTGCTTACAGCG...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCACACCTCTCTTACAGTaGAACGCGATGAGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: LLKGIALCVSHWVGALCPTPLLQ*NAMSEV
Trigger: CACCTCGCTCATCGCGTTTCACTGTAAGAGAGGTGT...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCATGTCCGGTAGCTGTTTaGGTGTCTGCAGAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPCPVAV*VSAEAP
Trigger: TGGGGCTTCTGCAGACACTCAAACAGCTACCGGACA...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGCAACTTTGTCACCTATaGCACCCAGCTTCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMQLCHL*HPASAC
Trigger: ACACGCAGAAGCTGGGTGTCATAGGTGACAAAGTTG...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCGGAAGGAGTGGGGCCTaGCCTCCTTCACCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTGRSGA*PPSPSP
Trigger: GGGAGAGGGTGAAGGAGGTCAGGCCCCACTCCTTCC...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCAGCCCTGTGGCCGATCTaGGCCATGCCTTATTCCAAT +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPALWPI*AMPYSN
Trigger: ATTGGAATAAGGCATGGCTCAGATCGGCCACAGGGC...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGAGGTATCATGAGAACCTaGAGAGATGAGACCTATACC +
Preference number: 4 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGGIMRT*RDETYT
Trigger: GGTATAGGTCTCATCTCTTCAGGTTCTCATGATACC...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGACATACAACCTCCTGGTaGCACACACACTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: EHSVACSQASGVCQEKKRHTTSW*HTHWLL
Trigger: AAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTATG...TCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGATGAGTGTACCTCCCTaGGCCATGGGATTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMMSVPP*AMGFFR
Trigger: TCTGAAGAATCCCATGGCTCAGGGAGGTACACTCAT...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACCTCCCATCTGGTTGCTaGAGCGTCTCCATCTCTTTA +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDLPSGC*SVSISL
Trigger: TAAAGAGATGGAGACGCTTCAGCAACCAGATGGGAG...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACACTCCCATCTGGTTGCTaGAGCGTCTCCATCTCTTTA +
Preference number: 4 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTLPSGC*SVSISL
Trigger: TAAAGAGATGGAGACGCTTCAGCAACCAGATGGGAG...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGAGGCCATTTTCTATTGTaGTTTCACGTGTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGGHFLL*FHVWSA
Trigger: TGCTGACCACACGTGAAATCACAATAGAAAATGGCC...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACAGGACTCTGTGATTTGTaGCTTGCTGGTCACAGCTCA +
Preference number: 4 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTGLCDL*LAGHSS
Trigger: TGAGCTGTGACCAGCAAGGCACAAATCACAGAGTCC...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCGTCTTTCTTGCAGGCTaGAGTGGTCCTCCACTCAAA +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVVFLAG*SGPPLK
Trigger: TTTGAGTGGAGGACCACTGCAGCCTGCAAGAAAGAC...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGAGCTGAAACCCTGAGCTaGATTCATCACCTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGAETLS*IHHLQN
Trigger: ATTTTGGAGGTGATGAATGCAGCTCAGGGTTTCAGC...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGACTGGAGAGGTCGTACTaGTCCAGCGTGGAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERLERSY*SSVEGS
Trigger: CGACCCCTCCACGCTGGAGCAGTACGACCTCTCCAG...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACGCCACCTTCAGATTTTaGCAGACTGGAGAGGTCGTA +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDATFRF*QTGEVV
Trigger: TACGACCTCTCCAGTCTGGCAAAATCTGAAGGTGGC...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATGGTCAGAACCTCATCCTCATCTGGCAAGCCGATaGATATCGGTTGCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: QLPCPSELSPLGWSEPHPHLASR*ISVAAR
Trigger: CCGGGCTGCAACCGATATGCATCGGCTTGCCAGATG...AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCATTCCAGAAGGAGGCTaGCGCTGTCCTCAACCACCG +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTIPEGG*RCPQPP
Trigger: CGGTGGTTGAGGACAGCGGCAGCCTCCTTCTGGAAT...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCAAGACCCCACTGCGCTaGCCTGGCATCCAGGAATGT +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTKTPLR*PGIQEC
Trigger: ACATTCCTGGATGCCAGGGCAGCGCAGTGGGGTCTT...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCGTCGTCCCCGGGATTCTCGCTGTCAAAGCCCACCCCCAGAGGACACACGGCTTCAGGTCATACAAGTTaGCATGCCTTGGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: PSSPGFSLSKPTPRGHTASGHTS*HALGLS
Trigger: TGAAAGACCCAAGGCATGGCAACTTGTATGACCTGA...AGCCGTGTGTCCTCTGGGGGTGGGCTTTGACAGCGAGAATCCCGGGGACGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACACTGAGTCAGGAGACCTaGCACTTTGTGAAATCCCTG +
Preference number: 4 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTLSQET*HFVKSL
Trigger: CAGGGATTTCACAAAGTGGCAGGTCTCCTGACTCAG...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCCTGAGTCAGGAGACCTaGCACTTTGTGAAATCCCTG +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVLSQET*HFVKSL
Trigger: CAGGGATTTCACAAAGTGGCAGGTCTCCTGACTCAG...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATGGTCAGAACCTCATCCTATACTGGCCGCTGGGTaGCGCGGTCACAGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: QLPCPSELSPLGWSEPHPILAAG*RGHSRR
Trigger: TCTTCTACTGTGACCGCGGCACCCAGCGGCCAGTAT...AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACACAGCAGACACGCGGCTaGTTCTGGAGGGCACGGCTC +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTQQTRG*FWRARL
Trigger: GAGCCGTGCCCTCCAGAAGCAGCCGCGTGTCTGCTG...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCACCTGGCAGTCATCATaGTCGTTGCTCTTCATGGGA +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSTWQSS*SLLFMG
Trigger: TCCCATGAAGAGCAACGAGCATGATGACTGCCAGGT...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACAAGAGAGTGCATGTCTaGTTGTCCAGGGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDKRVHV*LSREMS
Trigger: GCTCATCTCCCTGGACAAGCAGACATGCACTCTCTT...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGTTGTTCTGGCCCGACTaGAAAGGTGCACACCCCAAC +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWELFWPD*KGAHPN
Trigger: GTTGGGGTGTGCACCTTTGCAGTCGGGCCAGAACAA...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGCGTAGTCCGCAGTTGTaGTACACCACAGCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQRSPQL*YTTASP
Trigger: GGGCGAAGCTGTGGTGTAGCACAACTGCGGACTACG...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTGCTCCTGAAGGGCATTaGTCTGTGCGTTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPAPEGH*SVRFSL
Trigger: CAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGCACTGTCTTCTGCTGTaGAGAGCTGGACTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMHCLLL*RAGLPF
Trigger: AAAGGGAAGTCCAGCTCTGCACAGCAGAAGACAGTG...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCAGGTACATCACACCCCTaGTGGCAGGAAGAAACGGTG +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPGTSHP*WQEETV
Trigger: CACCGTTTCTTCCTGCCAGCAGGGGTGTGATGTACC...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTCACTCGGGGACCCTGTaGACGTATGTGTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLHSGTL*TYVCVC
Trigger: GCACACACACACATACGTGCACAGGGTCCCCGAGTG...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGCACTCGGGGACCCTGTaGACGTATGTGTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQHSGTL*TYVCVC
Trigger: GCACACACACACATACGTGCACAGGGTCCCCGAGTG...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTGTACAGGCTGAGGGATaGTGCAGGGCGGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPVQAEG*CRAVCF
Trigger: GAAGCAAACCGCCCTGCAGCATCCCTCAGCCTGTAC...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATGGTCAGAACCTCATCCTCACCTGCACCACGACTaGCCGTTGACCCCATTCTCA +
Preference number: 4 (lower is better)
Translates to: QLPCPSELSPLGWSEPHPHLHHD*PLTPFS
Trigger: TGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTG...AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTCCAGCATCCCAAGGCTaGTTTCTCTGGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPPASQG*FLWDGA
Trigger: AGCCCCATCCCAGAGAAAGCAGCCTTGGGATGCTGG...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTCCTTCCAGGGCTCTGTaGTCCACCCTGTCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPPSRAL*STLSLA
Trigger: TGCTAGAGACAGGGTGGAGCACAGAGCCCTGGAAGG...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTGCCTACCTGGAGGCCTaGTGGCCATTTTCTATTGTG +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPAYLEA*WPFSIV
Trigger: CACAATAGAAAATGGCCAGCAGGCCTCCAGGTAGGC...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CATGAGGAGACCACCTTGGACTTGTCACTTGTGGGGCAGACGTCTGAGGAAAGCGCTTCTTCCCGTCGGTaGCACCGCAGAGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: HEETTLDLSLVGQTSEESASSRR*HRRGGL
Trigger: AAGACCTCCTCTGCGGTGCCACCGACGGGAAGAAGC...GCTTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR CCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCCCGGGCAGGCATAGCTaGTGTACCACCGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTPGRHS*CTTGSC
Trigger: ACAACTTCCGGTGGTACACCAGCTATGCCTGCCCGG...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACACCCCTGAGTTGTCCATaGCATACCAGTTTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTPLSCP*HTSFLQ
Trigger: TTGGAGGAAACTGGTATGCCATGGACAACTCAGGGG...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGTTCAGCCTGCCCCTaGAGCAGACGAGATGGATCC +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPCSACP*SRRDGS
Trigger: GGATCCATCTCGTCTGCTCCAGGGGCAGGCTGAACA...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGACTTGGCAGTCCACTaGAGAAGGAACACAGGCCAA +
Preference number: 4 (lower is better)
Translates to: EHSVACSQASGVCQEKKRDLAVH*RRNTGQ
Trigger: TTGGCCTGTGTTCCTTCTCCAGTGGACTGCCAAGTC...TCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTGCCAGGTCGGTGACTTaGCAGTCCACTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISAARSVT*QSTGEG
Trigger: TCCTTCTCCAGTGGACTGCCAAGTCACCGACCTGGC...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCTGGTGGAGAAGCGCTaGTTCCCACACTTGTCACCG +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRLVEKR*FPHLSP
Trigger: CGGTGACAAGTGTGGGAACCAGCGCTTCTCCACCAG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTAGTCAGATCGAAAGGTaGGCAGGCATACTGCGTTCG +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATASQIER*AGILRS
Trigger: CGAACGCAGTATGCCTGCCCACCTTTCGATCTGACT...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAAGTCAGATCGAAAGGTaGGCAGGCATACTGCGTTCG +
Preference number: 4 (lower is better)
Translates to: EHSVACSQASGVCQEKKRSQIER*AGILRS
Trigger: CGAACGCAGTATGCCTGCCCACCTTTCGATCTGACT...TCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCAGGTGTCCTGTGCTTaGGTTGGTGACCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRQVSCA*VGDLAV
Trigger: GACTGCCAGGTCACCAACCCAAGCACAGGACACCTG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGAGCTCAGGCCGGATTTaGAGGGACAAGGGGACCCAT +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRSSGRI*RDKGTH
Trigger: ATGGGTCCCCTTGTCCCTCCAAATCCGGCCTGAGCT...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGAGCTCAGGCCGGATTTaGAGGGACAAGGGGACCCAT +
Preference number: 4 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRSSGRI*RDKGTH
Trigger: ATGGGTCCCCTTGTCCCTCCAAATCCGGCCTGAGCT...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGCATGGGCCTATTGGTTaGCCTGGCCTCAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLHGPIG*PGLRPA
Trigger: TGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCATG...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GTCACCTATGACACCCAGCTTCTGCGTGTGAACGAGTCCCAGGACCTGGACGTCCAAAGGATGCCCCCTTaGTGCCTGAGAGCAGACAGA +
Preference number: 4 (lower is better)
Translates to: VTYDTQLLRVNESQDLDVQRMPP*CLRADR
Trigger: TCTGTCTGCTCTCAGGCACCAAGGGGGCATCCTTTG...GACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGGTGTCATAGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCAGGTAGTTGTCCCCATTaGTCCTCATGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPGSCPH*SSCPQR
Trigger: CCTCTGGGGACATGAGGACCAATGGGGACAACTACC...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGGGTAGTTGTCCCCATTaGTCCTCATGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLGSCPH*SSCPQR
Trigger: CCTCTGGGGACATGAGGACCAATGGGGACAACTACC...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCACCGCGCCGACTGCCTaGCTCCGTTCTGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLTAPTA*LRSDSP
Trigger: GGGGCTGTCAGAACGGAGCCAGGCAGTCGGCGCGGT...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCCTTTCACCTCTGGGATaGTCAGAACCTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSLSPLG*SEPHPH
Trigger: GTGAGGATGAGGTTCTGACCATCCCAGAGGTGAAAG...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCGAAGTCTTATTTGGTTaGAGGTGCTTGGCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSEVLFG*RCLAVP
Trigger: CGGGACAGCCAAGCACCTCCAACCAAATAAGACTTC...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TGCCTCACAGCCAGAAGCAGGTTTTCCCAGGATGGTCCCACAGACAGGCATTGTCTTGGGGCAAAACCCTaGGCACAAGGTACCGCCCTG +
Preference number: 4 (lower is better)
Translates to: CLTARSRFSQDGPTDRHCLGAKP*AQGTAL
Trigger: CAGGGCGGTACCTTGTGCCCAGGGTTTTGCCCCAAG...ACAATGCCTGTCTGTGGGACCATCCTGGGAAAACCTGCTTCTGGCTGTGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR CCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTTGGAGAACAGCCCCCTaGGTAGAATGCCTGAGGACC +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISAWRTAP*VECLRT
Trigger: GGTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCA...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAAGCAGGAGGTGGGAATaGCCTGGAGAACAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQSRRWE*PGEQPP
Trigger: AGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGCT...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGAGCAGGAGGTGGGAATaGCCTGGAGAACAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLSRRWE*PGEQPP
Trigger: AGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGCT...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CACAGCCAGAAGCAGGTTTTCCCAGGATGGTCCCACAGACAGGCATTGTGCCGCAGCTTACCAAGGGGATaGGCAGGTCCCTGCATATGC +
Preference number: 4 (lower is better)
Translates to: HSQKQVFPGWSHRQALCRSLPRG*AGPCIC
Trigger: GCATATGCAGGGACCTGCCCATCCCCTTGGTAAGCT...GCGGCACAATGCCTGTCTGTGGGACCATCCTGGGAAAACCTGCTTCTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR CCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCTTAGCAGGCAGCCAGTaGTGCAGACAACATGCCTTT +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVLAGSQ*CRQHAF
Trigger: AAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAA...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGTGGGATGGGGCTGAGTaGCACCAGATGACCTCACCT +
Preference number: 4 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQWDGAE*HQMTSP
Trigger: AGGTGAGGTCATCTGGTGCCACTCAGCCCCATCCCA...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTCAAGGCTGCTTTCTCTaGGATGGGGCTGAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISAQGCFL*DGAEWH
Trigger: GTGCCACTCAGCCCCATCCCAGAGAAAGCAGCCTTG...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTAAGGGAATTTCCCAGTaGATGGTCACAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATAKGISQ*MVTGHQ
Trigger: CTGGTGGCCTGTGACCATCCACTGGGAAATTCCCTT...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GCTGATCGTTGGGCTTCACCTGGCATATGTTGGCTCCAGAGCACGCCGGGTTTCCTCCGTGGGAGCCTCTaGAAAACAACAGAACCTCGC +
Preference number: 4 (lower is better)
Translates to: ADRWASPGICWLQSTPGFLRGSL*KTTEPR
Trigger: GCGAGGTTCTGTTGTTTTCCAGAGGCTCCCACGGAG...GAAACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGATCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CAA 72 bp CCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTaGCCGCCTTGCACACAAGCTCACCTGCACCACGAC +
Preference number: 4 (lower is better)
Translates to: PRPYCPQLNVAI*PPCTQAHLHHD
Trigger: GTCGTGGTGCAGGTGAGCTTGTGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CAA 72 bp AGGACCTGGTCCACGTATCTCAGCCTCTTGTTGGCCTaGCCCACGCTAATCCTGGTCTGTCCAAAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: RTWSTYLSLLLA*PTLILVCPKQA
Trigger: GGCCTGCTTTGGACAGACCAGGATTAGCGTGGGCAAGGCCAACAAGAGGCTGAGATACGTGGACCAGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CAA 72 bp CATGTCTGCTTGTCCAGGGAGATGAGCATGGGCCTATaGGTTGGCCTGGCCTCAGGCCTGCACACGAAACTG +
Preference number: 4 (lower is better)
Translates to: HVCLSREMSMGL*VGLASGLHTKL
Trigger: CAGTTTCGTGTGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCATGCTCATCTCCCTGGACAAGCAGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CAA 72 bp GCGTGTGAACGAGTCCCAGGACCTGGACGTCACCAGTaGTGGTCCTTCTGCAAATGCTGGCCCTTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: ACERVPGPGRHQ*WSFCKCWPFQS
Trigger: GCTCTGAAAGGGCCAGCATTTGCAGAAGGACCACAACTGGTGACGTCCAGGTCCTGGGACTCGTTCACACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGCCTGCTGCTTTGACTTaGGAGGTATCGCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMPAALT*EVSLFF
Trigger: GAAAAAGAGCGATACCTCTCAAGTCAAAGCAGCAGG...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACATCTTCCTGCTGCTTTaGCTTGAGAGGTATCGCTCT +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDIFLLL*LERYRS
Trigger: AGAGCGATACCTCTCAAGTCAAAGCAGCAGGAAGAT...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCCGTCCAAGGTTTCCTaGCTGTGCTTAGGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRPSKVS*LCLGQS
Trigger: TGACTGGCCTAAGCACAGTCAGGAAACCTTGGACGG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGCGCTGTAAGCAGCTGTaGATCCCGCCCTGCCACTTA +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLRCKQL*IPPCHL
Trigger: TAAGTGGCAGGGCGGGATTCACAGCTGCTTACAGCG...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGGCCTGCACACGAAACTaGTCACACTCTTATAGCTCA +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMACTRN*SHSYSS
Trigger: TGAGCTATAAGAGTGTGATCAGTTTCGTGTGCAGGC...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGTGTCCGGTAGCTGTTTaGGTGTCTGCAGAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRCPVAV*VSAEAP
Trigger: TGGGGCTTCTGCAGACACTCAAACAGCTACCGGACA...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTACCCACGCACTTCACTaGAGACTTGTGGCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPTHALH*RLVASQ
Trigger: TTGGGAGGCCACAAGTCTTCAGTGAAGTGCGTGGGT...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAACCCACGCACTTCACTaGAGACTTGTGGCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTTHALH*RLVASQ
Trigger: TTGGGAGGCCACAAGTCTTCAGTGAAGTGCGTGGGT...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGAAACCTTTGGAGTACGTaGCAACAACTTTGTCACCTA +
Preference number: 4 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGNLWST*QQLCHL
Trigger: TAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTT...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAACCCGGGAGTCCCAGCTaGAGTAGTAAGTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQPGSPS*SSKCSC
Trigger: ACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGG...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCACCATCTGCACCTCCTaGGGCTTCACGGCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTTICTS*GFTAQA
Trigger: TGCCTGCGCCGTGAAGCCTCAGGAGGTGCAGATGGT...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCGGTTTCTGGAGCTTGTaGTGGAGGAAAGTTGGATCT +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVGFWSL*WRKVGS
Trigger: AGATCCAACTTTCCTCCATCACAAGCTCCAGAAACC...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACATTCCGACTGAAGTGCTaGTCGTTGGGCTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTFRLKC*SLGFTW
Trigger: CCAGGTGAAGCCCAACGATCAGCACTTCAGTCGGAA...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTCCACCAGCAGCAGGCTaGGCACCGCGCCGACTGCCT +
Preference number: 4 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLPPAAG*APRRLP
Trigger: AGGCAGTCGGCGCGGTGCTCAGCCTGCTGCTGGTGG...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CACAGCCAGAAGCAGGTTTTCCCAGGATGGTCCCACAGACAGGCATTGTGCCGCGCTGAGGGCTTTCACTaGCTTGGTGGTAATATGGCC +
Preference number: 4 (lower is better)
Translates to: HSQKQVFPGWSHRQALCRAEGFH*LGGNMA
Trigger: GGCCATATTACCACCAAGTCAGTGAAAGCCCTCAGC...GCGGCACAATGCCTGTCTGTGGGACCATCCTGGGAAAACCTGCTTCTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR TCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCGGAAGGAGTGGGGCCTaGCCTCCTTCACCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLGRSGA*PPSPSP
Trigger: GGGAGAGGGTGAAGGAGGTCAGGCCCCACTCCTTCC...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTGCCCTGTGGCCGATCTaGGCCATGCCTTATTCCAAT +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLALWPI*AMPYSN
Trigger: ATTGGAATAAGGCATGGCTCAGATCGGCCACAGGGC...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTGCCCTGTGGCCGATCTaGGCCATGCCTTATTCCAAT +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISAALWPI*AMPYSN
Trigger: ATTGGAATAAGGCATGGCTCAGATCGGCCACAGGGC...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATGGTCAGAACCTCATCCTAGCTGCCCCATACACTaGCAGCCTCACCATCTCAAG +
Preference number: 4 (lower is better)
Translates to: QLPCPSELSPLGWSEPHPSCPIH*QPHHLK
Trigger: CTTGAGATGGTGAGGCTGTCAGTGTATGGGGCAGCT...AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCCTGTACGCCCAGGCTTaGAGATATCATGCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSLYAQA*RYHAKR
Trigger: CCTTTTTGCATGATATCTTCAAGCCTGGGCGTACAG...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACTTTGGGCAGGTTGTTTaGATTCACCAGCCGGCAAAA +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDFGQVV*IHQPAK
Trigger: TTTTGCCGGCTGGTGAATTCAAACAACCTGCCCAAA...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGACGAGGCTCTGGCCCATaGTTTTTCATGCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: EHSVACSQASGVCQEKKRRGSGP*FFMQFL
Trigger: CAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCG...TCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCCAAACCGGTACAGGCTaGGGGATGCTGCAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTQTGTG*GMLQGG
Trigger: ACCGCCCTGCAGCATCCCTCAGCCTGTACCGGTTTG...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGACCACGACTGCCCGTTaGCCCCATTCTCACAGAACA +
Preference number: 4 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRTTTAR*PHSHRT
Trigger: TGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGT...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTCAAACTCCTTACTGTaGCAGTCACAACAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMSNSLL*QSQQAP
Trigger: TGGAGCCTGTTGTGACTGTCACAGTAAGGAGTTTGA...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAGAGGCAGGTGGATCATaGGGTCAGGAGATCGAGACC +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQEAGGS*GQEIET
Trigger: GGTCTCGATCTCCTGACCTCATGATCCACCTGCCTC...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGCTGAGTGGCACCAGATaGCCTCACCTGGGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLLSGTR*PHLGCE
Trigger: CTCACAACCCAGGTGAGGTCATCTGGTGCCACTCAG...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTCCATTCTGGCAGGTGTaGGGCAACGTCTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPPFWQV*GNVSLC
Trigger: ACACAGTGAGACGTTGCCTCACACCTGCCAGAATGG...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAGGACAAGCCTGTCCTTaGGCACCAGCTTCAGTCCGT +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQGQACP*APASVR
Trigger: ACGGACTGAAGCTGGTGCGCAAGGACAGGCTTGTCC...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCTGATCGTTGGGCTTCACCTGGCATATGTTGGCTCCAGAGCACGCCGGGTTTCATGGAGACATCCTGCTaGTCGCCGCTCAGAGAACAA +
Preference number: 4 (lower is better)
Translates to: ADRWASPGICWLQSTPGFMETSC*SPLREQ
Trigger: TTGTTCTCTGAGCGGCGAGCAGCAGGATGTCTCCAT...GAAACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGATCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTGACACCCTCGTGCCTTaGCTTCCTGCAGCACTCTGT +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSDTLVP*LPAALC
Trigger: ACAGAGTGCTGCAGGAAGGCAAGGCACGAGGGTGTC...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGAGTTCTCAACACTGGTaGACTTTCCAGATCACCTGG +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMSSQHW*TFQITW
Trigger: CCAGGTGATCTGGAAAGTGCACCAGTGTTGAGAACT...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCTTCAGTTTGGGTTTCTaGCTCACAGCCAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLKGIALCVSHWVGALCPFSLGF*LTARSR
Trigger: CCTGCTTCTGGCTGTGAGGCAGAAACCCAAACTGAA...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTGAGGGCACGGCTCAGTaGCAGCCTGCGGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIEGTAQ*QPAGPE
Trigger: CTCTGGCCCCGCAGGCTGGCACTGAGCCGTGCCCTC...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356956.6
ENST00000676781.1
CDS-3UTR GCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCCAGCAGACACGCGGCTaGTTCTGGAGGGCACGGCTC +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLQQTRG*FWRARL
Trigger: GAGCCGTGCCCTCCAGAAGCAGCCGCGTGTCTGCTG...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTAAGAGAGTGCATGTCTaGTTGTCCAGGGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCKRVHV*LSREMS
Trigger: GCTCATCTCCCTGGACAAGCAGACATGCACTCTCTT...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGAGTATTGGTGGTCCTaGTACCCGGCCGATATCTAT +
Preference number: 4 (lower is better)
Translates to: EHSVACSQASGVCQEKKREYWWS*YPADIY
Trigger: ATAGATATCGGCCGGGTAGCAGGACCACCAATACTC...TCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGAAGGGCATTGCTCTGTaGGTTTCTCACTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLKGIAL*VSHWVG
Trigger: TCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTT...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTCACTGTCTTCTGCTGTaGAGAGCTGGACTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATAHCLLL*RAGLPF
Trigger: AAAGGGAAGTCCAGCTCTGCACAGCAGAAGACAGTG...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACATTATTTGGTTGGAGGTaGTTGGCTGTCCCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTLFGWR*LAVPRL
Trigger: GAGCCGCGGGACAGCCAAGCACCTCCAACCAAATAA...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCCTCCCTCCTCCTCCATaGTGTGACCGCCCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALLPPPP*CDRPAS
Trigger: GGAGGCCGGGCGGTCACAGCATGGAGGAGGAGGGAG...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCTGGCAGGAAAGGCGCTaGCGCCAGAATAAGAACACC +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTWQERR*RQNKNT
Trigger: GGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCA...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTTGCTGCAGGGCGGTTTaGTTCTCAGCAATAGAACAC +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATACCRAV*FSAIEH
Trigger: GTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCA...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTGCTATCTTGCCGCCTTaGACACAAGCTCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISAAILPP*TQAHLH
Trigger: GTGCAGGTGAGCTTGTGTGCAAGGCGGCAAGATAGC...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCTCAATGTGGCTATCTTaGCGCCTTGCACACAAGCTC +
Preference number: 4 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPSMWLS*RLAHKL
Trigger: GAGCTTGTGTGCAAGGCGGCAAGATAGCCACATTGA...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGCAGCCACAGCTCCCATaGCCAACCTCCCATCTGGTT +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLQPQLP*PTSHLV
Trigger: AACCAGATGGGAGGTTGGGCATGGGAGCTGTGGCTG...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp TGCCTCACAGCCAGAAGCAGGTTTTCCCAGGATGGTCCCACAGACAGGCATTGTCAGCCACAGCTCCCATaGCCAACCTCCCATCTGGTT +
Preference number: 4 (lower is better)
Translates to: CLTARSRFSQDGPTDRHCQPQLP*PTSHLV
Trigger: AACCAGATGGGAGGTTGGGCATGGGAGCTGTGGCTG...ACAATGCCTGTCTGTGGGACCATCCTGGGAAAACCTGCTTCTGGCTGTGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR GCA 90 bp TGCCTCACAGCCAGAAGCAGGTTTTCCCAGGATGGTCCCACAGACAGGCATTGTCCAGCATCCCAAGGCTaGTTTCTCTGGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: CLTARSRFSQDGPTDRHCPASQG*FLWDGA
Trigger: AGCCCCATCCCAGAGAAAGCAGCCTTGGGATGCTGG...ACAATGCCTGTCTGTGGGACCATCCTGGGAAAACCTGCTTCTGGCTGTGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR GCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGCCTTCCAGGGCTCTGTaGTCCACCCTGTCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLPSRAL*STLSLA
Trigger: TGCTAGAGACAGGGTGGAGCACAGAGCCCTGGAAGG...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GTCACCTATGACACCCAGCTTCTGCGTGTGAACGAGTCCCAGGACCTGGACGTCGCCTACCTGGAGGCCTaGTGGCCATTTTCTATTGTG +
Preference number: 4 (lower is better)
Translates to: VTYDTQLLRVNESQDLDVAYLEA*WPFSIV
Trigger: CACAATAGAAAATGGCCAGCAGGCCTCCAGGTAGGC...GACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGGTGTCATAGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTCAAATGTCTAGGAATTaGTGCCTACCTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCQMSRN*CLPGGL
Trigger: CAGGCCTCCAGGTAGGCAGCAATTCCTAGACATTTG...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCCAAATGTCTAGGAATTaGTGCCTACCTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LLKGIALCVSHWVGALCPQMSRN*CLPGGL
Trigger: CAGGCCTCCAGGTAGGCAGCAATTCCTAGACATTTG...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCAAATGTCTAGGAATTaGTGCCTACCTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPQMSRN*CLPGGL
Trigger: CAGGCCTCCAGGTAGGCAGCAATTCCTAGACATTTG...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGGCAATGAACAGGGGCTaGAGAGATCTCTTCAAGGTA +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMAMNRG*RDLFKV
Trigger: TACCTTGAAGAGATCTCTGCAGCCCCTGTTCATTGC...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGTTCCCAATTCTGCTCTaGTTCTGCATGGCGGACCAG +
Preference number: 4 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLFPILL*FCMADQ
Trigger: CTGGTCCGCCATGCAGAACCAGAGCAGAATTGGGAA...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACACGTACTGCTCCAGCGTaGAGGGGTCGGTCACTACGC +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTRTAPA*RGRSLR
Trigger: GCGTAGTGACCGACCCCTCCACGCTGGAGCAGTACG...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTCCGTCGTTGTCTGAATaGGACAGGCAGCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLPSLSE*DRQPLC
Trigger: ACACAGAGGCTGCCTGTCCCATTCAGACAACGACGG...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTGCCAGGTCGGTGACTTaGCAGTCCACTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPARSVT*QSTGEG
Trigger: TCCTTCTCCAGTGGACTGCCAAGTCACCGACCTGGC...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAACTGGTGGAGAAGCGCTaGTTCCCACACTTGTCACCG +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQLVEKR*FPHLSP
Trigger: CGGTGACAAGTGTGGGAACCAGCGCTTCTCCACCAG...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGGCCTGGAGTTCACTTaGCTCTCGCTGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQGLEFT*LSLQVN
Trigger: ATTCACCTGCAGCGAGAGCCAAGTGAACTCCAGGCC...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAGCTCGTTGCTCTTCATaGGACAGGCTGTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQARCSS*DRLWLW
Trigger: CCACAGCCACAGCCTGTCCCATGAAGAGCAACGAGC...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTAGGGCACTCCGTGCATaGGATTTAGTGGCTGACAAA +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATARALRA*DLVADK
Trigger: TTTGTCAGCCACTAAATCCCATGCACGGAGTGCCCT...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTACAGCCTCCTTGTTCTaGCCCGACTGCAAAGGTGCA +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPTASLF*PDCKGA
Trigger: TGCACCTTTGCAGTCGGGCCAGAACAAGGAGGCTGT...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTCAAAGGATGCCCCCTTaGTGCCTGAGAGCAGACAGA +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISAQRMPP*CLRADR
Trigger: TCTGTCTGCTCTCAGGCACCAAGGGGGCATCCTTTG...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCATCCTTCTGCAAATGCTaGCCCTTTCAGAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPSFCKC*PFQSSP
Trigger: TGGGCTGCTCTGAAAGGGCCAGCATTTGCAGAAGGA...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTTCACCTGGCATATGTTaGCTCCAGAGCACGCCGGGT +
Preference number: 4 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPSPGIC*LQSTPG
Trigger: ACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGA...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAACGTGGAGGAGGCAGCTaGATCTCTTCCATCAGCCAC +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQRGGGS*ISSISH
Trigger: GTGGCTGATGGAAGAGATCCAGCTGCCTCCTCCACG...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTCTTTCACCTCTGGGATaGTCAGAACCTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCLSPLG*SEPHPH
Trigger: GTGAGGATGAGGTTCTGACCATCCCAGAGGTGAAAG...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCTCGTCGCTGTCGTCATaGAAGGACACCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTSSLSS*KDTSLV
Trigger: CACCAAGCTGGTGTCCTTCCATGACGACAGCGACGA...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTTCGTCGCTGTCGTCATaGAAGGACACCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISASSLSS*KDTSLV
Trigger: CACCAAGCTGGTGTCCTTCCATGACGACAGCGACGA...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTACAATCAGGAAGGAGTaGGGCCTGACCTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPTIRKE*GLTSFT
Trigger: GGTGAAGGAGGTCAGGCCCCACTCCTTCCTGATTGT...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACATCAAGATGGACAAACTaGTACATCACACCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTSRWTN*YITPLL
Trigger: CAGCAGGGGTGTGATGTACCAGTTTGTCCATCTTGA...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCTGATCGTTGGGCTTCACCTGGCATATGTTGGCTCCAGAGCACGCCGGGTTTCACCACACCCCGAGGTTaGCCTGGAGAAGGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: ADRWASPGICWLQSTPGFTTPRG*PGEGKE
Trigger: TTCTTTACCTTCTCCAGGCCAACCTCGGGGTGTGGT...GAAACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGATCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCAGTCCCCAACTCAATGTaGCTATCTTGCCGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPVPNSM*LSCRLA
Trigger: TGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGAC...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGGTCCCCAACTCAATGTaGCTATCTTGCCGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLVPNSM*LSCRLA
Trigger: TGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGAC...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTCTCAAAAGCCCAATCTaGCCCTCCTACAGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCLKSPI*PSYSSQ
Trigger: TTGAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAG...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATGGTCAGAACCTCATCCTGCCCAACCTCCCATCTaGTTGCTGAAGCGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: QLPCPSELSPLGWSEPHPAQPPI*LLKRLH
Trigger: ATGGAGACGCTTCAGCAACCAGATGGGAGGTTGGGC...AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTAAAATTAGCCGGGCGTaGCAGTGCGTGCCTTTAATC +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPKISRA*QCVPLI
Trigger: GATTAAAGGCACGCACTGCCACGCCCGGCTAATTTT...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCTGCTCATCAACGGTGTaGTCTCATACAGACCACCCA +
Preference number: 4 (lower is better)
Translates to: LLKGIALCVSHWVGALCPCSSTV*SHTDHP
Trigger: TGGGTGGTCTGTATGAGACCACACCGTTGATGAGCA...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CAA 72 bp GGCCCAGGGGCTTCAGGTCATACAAGTTGCCATGCCTaGGGTCTTTCACCTCACAGTTGTCCCCTTCCACTC +
Preference number: 4 (lower is better)
Translates to: GPGASGHTSCHA*GLSPHSCPLPL
Trigger: GAGTGGAAGGGGACAACTGTGAGGTGAAAGACCCAAGGCATGGCAACTTGTATGACCTGAAGCCCCTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CAA 72 bp GGCGTGTGCCAGGAGAAGAAGAGAGTGCATGTCTGCTaGTCCAGGGAGATGAGCATGGGCCTATTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: GVCQEKKRVHVC*SREMSMGLLVG
Trigger: GCCAACCAATAGGCCCATGCTCATCTCCCTGGACAAGCAGACATGCACTCTCTTCTTCTCCTGGCACACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCAACAGAGTCACCCACTaGATGATAAGTGCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSNRVTH*MISACL
Trigger: AAGACACGCACTTATCATTCAGTGGGTGACTCTGTT...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTATCTTCCTGCTGCTTTaGCTTGAGAGGTATCGCTCT +
Preference number: 4 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCIFLLL*LERYRS
Trigger: AGAGCGATACCTCTCAAGTCAAAGCAGCAGGAAGAT...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTATTCCGTGTCCCATGTaGAGAAGTAGGTGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPIPCPM*RSRCSQ
Trigger: TTGACTGCACCTACTTCTTCACATGGGACACGGAAT...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTCGTGACATGTTCCCCTaGGTTGTCCATGGCATACCA +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISARDMFP*VVHGIP
Trigger: TGGTATGCCATGGACAACTCAGGGGAACATGTCACG...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACTGGAAACCACTTCAGTaGAGGAGCCCTGATCTTTTT +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDWKPLQ*RSPDLF
Trigger: AAAAAGATCAGGGCTCCTTCACTGAAGTGGTTTCCA...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCCTGGCTTCCAATTCTTaGGCTCTTCAGTTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVLASNS*ALQFGF
Trigger: AAACCCAAACTGAAGAGCTCAAGAATTGGAAGCCAG...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTGAGCACACTCAAACGTaGTCCTGGTGGAGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPEHTQT*SWWRSA
Trigger: AGCGCTTCTCCACCAGGATCACGTTTGAGTGTGCTC...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCTGCCAGCCCCATCTTTaGATGAACATTCAGTCAGAT +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSCQPHL*MNIQSD
Trigger: ATCTGACTGAATGTTCATTCAAAGATGGGGCTGGCA...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGGTTGTCACTGTACCTTaGCAGGGACGAGAGGTCGAA +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRVVTVP*QGREVE
Trigger: TTCGACCTCTCGTCCCTGTCAAGGTACAGTGACAAC...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGGTTGTCACTGTACCTTaGCAGGGACGAGAGGTCGAA +
Preference number: 4 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRVVTVP*QGREVE
Trigger: TTCGACCTCTCGTCCCTGTCAAGGTACAGTGACAAC...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACGGTCCCCCGTCCCAGTaGTGGCTTCCCAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDGPPSQ*WLPSCH
Trigger: GTGACAACTGGGAAGCCATCACTGGGACGGGGGACC...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGAATCGGATGGTGGTTaGCTTTTTCCGAATCCCATC +
Preference number: 4 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCESDGG*LFPNPI
Trigger: GATGGGATTCGGAAAAAGTCAACCACCATCCGATTC...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGCTGTGCTTGGGTTGGTaGCCTGGCAGTCATCATGCT +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLLCLGW*PGSHHA
Trigger: AGCATGATGACTGCCAGGTCACCAACCCAAGCACAG...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCGCCTGCACACGAAACTaGTCACACTCTTATAGCTCA +
Preference number: 4 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPACTRN*SHSYSS
Trigger: TGAGCTATAAGAGTGTGATCAGTTTCGTGTGCAGGC...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGCATTTGCTATTGGATTaGGTATTGGTGGTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: RSLARRPAACARRRRECMHLLLD*VLVVLL
Trigger: TAGCAGGACCACCAATACTCAATCCAATAGCAAATG...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACTGCCCCCTTGGTGCCTaGGAGCAGACAGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDCPLGA*EQTDSS
Trigger: GGAGGAGTCTGTCTGCTCTCAGGCACCAAGGGGGCA...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCACAACTTTGTCACCTATaGCACCCAGCTTCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPQLCHL*HPASAC
Trigger: ACACGCAGAAGCTGGGTGTCATAGGTGACAAAGTTG...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGACCATCTGCACCTCCTaGGGCTTCACGGCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVTICTS*GFTAQA
Trigger: TGCCTGCGCCGTGAAGCCTCAGGAGGTGCAGATGGT...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGGTTTCTGGAGCTTGTaGTGGAGGAAAGTTGGATCT +
Preference number: 4 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCGFWSL*WRKVGS
Trigger: AGATCCAACTTTCCTCCATCACAAGCTCCAGAAACC...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GCTGATCGTTGGGCTTCACCTGGCATATGTTGGCTCCAGAGCACGCCGGGTTTCTTCCAACTTTCCGACTaGAGTGCTGATCGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: ADRWASPGICWLQSTPGFFQLSD*SADRWA
Trigger: AGCCCAACGATCAGCACTTCAGTCGGAAAGTTGGAA...GAAACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGATCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGCAGAGGACACACGGCTaGGGTGTACCAAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLQRTHG*GVPREE
Trigger: CTCTTCTCTTGGTACACCTCAGCCGTGTGTCCTCTG...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TGCCTCACAGCCAGAAGCAGGTTTTCCCAGGATGGTCCCACAGACAGGCATTGTCAGAGGACACACGGCTaGGGTGTACCAAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: CLTARSRFSQDGPTDRHCQRTHG*GVPREE
Trigger: CTCTTCTCTTGGTACACCTCAGCCGTGTGTCCTCTG...ACAATGCCTGTCTGTGGGACCATCCTGGGAAAACCTGCTTCTGGCTGTGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR TCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTGCTGAGGGCTTTCACTaGCTTGGTGGTAATATGGCC +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLAEGFH*LGGNMA
Trigger: GGCCATATTACCACCAAGTCAGTGAAAGCCCTCAGC...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp TGCCTCACAGCCAGAAGCAGGTTTTCCCAGGATGGTCCCACAGACAGGCATTGTTGCAGCCCTCTGTTTTaGGATGCGTCCGGCCTTATG +
Preference number: 4 (lower is better)
Translates to: CLTARSRFSQDGPTDRHCCSPLF*DASGLM
Trigger: CATAAGGCCGGACGCATCTCAAAACAGAGGGCTGCA...ACAATGCCTGTCTGTGGGACCATCCTGGGAAAACCTGCTTCTGGCTGTGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR TCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCAGCCGGCAAAAATACTaGCAAATGTGCTCTGTACGC +
Preference number: 4 (lower is better)
Translates to: LLKGIALCVSHWVGALCPSRQKY*QMCSVR
Trigger: GCGTACAGAGCACATTTGTCAGTATTTTTGCCGGCT...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCGTCGTCCCCGGGATTCTCGCTGTCAAAGCCCACCCCCAGAGGACACACGGCTAAAATTCATTTTCTCTaGCACCTCAACTCCACTCAC +
Preference number: 4 (lower is better)
Translates to: PSSPGFSLSKPTPRGHTAKIHFL*HLNSTH
Trigger: GTGAGTGGAGTTGAGGTGTCAGAGAAAATGAATTTT...AGCCGTGTGTCCTCTGGGGGTGGGCTTTGACAGCGAGAATCCCGGGGACGACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCGAGAACCTGAAGAGATaGGACCTATACCCCAAATCT +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSENLKR*DLYPKS
Trigger: AGATTTGGGGTATAGGTCTCATCTCTTCAGGTTCTC...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACGAGAACCTGAAGAGATaGGACCTATACCCCAAATCT +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDENLKR*DLYPKS
Trigger: AGATTTGGGGTATAGGTCTCATCTCTTCAGGTTCTC...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCGGTATCATGAGAACCTaGAGAGATGAGACCTATACC +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSGIMRT*RDETYT
Trigger: GGTATAGGTCTCATCTCTTCAGGTTCTCATGATACC...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGGGTATCATGAGAACCTaGAGAGATGAGACCTATACC +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMGIMRT*RDETYT
Trigger: GGTATAGGTCTCATCTCTTCAGGTTCTCATGATACC...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGGCATCTTAGTCGTGTaGAGGTCCTTGTTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCGILVV*RSLFVG
Trigger: TCCTACAAACAAGGACCTTCACACGACTAAGATGCC...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATGGTCAGAACCTCATCCTCATACAACCTCCTGGTaGCACACACACTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: QLPCPSELSPLGWSEPHPHTTSW*HTHWLL
Trigger: AAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTATG...AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGACCTCACCTGGGTTGTaGGCCCCTCATTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRTSPGL*APHFHS
Trigger: AGAGTGAAAATGAGGGGCTCACAACCCAGGTGAGGT...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGACTGAGTGGCACCAGATaGCCTCACCTGGGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERLSGTR*PHLGCE
Trigger: CTCACAACCCAGGTGAGGTCATCTGGTGCCACTCAG...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACCCACTGAATGATAAGTaGGTGTCTTCAAGTCGTGCA +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDPLNDK*VSSSRA
Trigger: TGCACGACTTGAAGACACGCACTTATCATTCAGTGG...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACCAGGAGAGATCTGGTTaGACTTCTCAAAACAGAGTC +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDQERSG*TSQNRV
Trigger: GACTCTGTTTTGAGAAGTGCAACCAGATCTCTCCTG...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTATGGAGACATCCTGCTaGTCGCCGCTCAGAGAACAA +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLMETSC*SPLREQ
Trigger: TTGTTCTCTGAGCGGCGAGCAGCAGGATGTCTCCAT...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCTCTATGGAGACATCCTaGTGCTCGCCGCTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTSMETS*CSPLRE
Trigger: TTCTCTGAGCGGCGAGCAGCAGGATGTCTCCATAGA...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGGCTGAAACCCTGAGCTaGATTCATCACCTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMAETLS*IHHLQN
Trigger: ATTTTGGAGGTGATGAATGCAGCTCAGGGTTTCAGC...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCCATTGTTATAGGGTGTaGCGCCTCTGTAGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSHCYRV*RLCSSV
Trigger: AACTGAACTACAGAGGCGGCACACCCTATAACAATG...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGCATTGTTATAGGGTGTaGCGCCTCTGTAGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMHCYRV*RLCSSV
Trigger: AACTGAACTACAGAGGCGGCACACCCTATAACAATG...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACCTGGAGAGGTCGTACTaGTCCAGCGTGGAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDLERSY*SSVEGS
Trigger: CGACCCCTCCACGCTGGAGCAGTACGACCTCTCCAG...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGGCCACCTTCAGATTTTaGCAGACTGGAGAGGTCGTA +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEATFRF*QTGEVV
Trigger: TACGACCTCTCCAGTCTGGCAAAATCTGAAGGTGGC...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGAATTCCAGAAGGAGGCTaGCGCTGTCCTCAACCACCG +
Preference number: 4 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERIPEGG*RCPQPP
Trigger: CGGTGGTTGAGGACAGCGGCAGCCTCCTTCTGGAAT...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGAGAGACGTTATATCCTTaGGAACTGTTTAGCGGATTA +
Preference number: 4 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGETLYP*ELFSGL
Trigger: TAATCCGCTAAACAGTTCGCAAGGATATAACGTCTC...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTAATTCCGACTGGCCTTaGTGGCTTCCAATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPNSDWP*WLPILE
Trigger: CTCAAGAATTGGAAGCCAGCAAGGCCAGTCGGAATT...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACTCAGGTCATACAAGTTaGCATGCCTTGGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDSGHTS*HALGLS
Trigger: TGAAAGACCCAAGGCATGGCAACTTGTATGACCTGA...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GTCACCTATGACACCCAGCTTCTGCGTGTGAACGAGTCCCAGGACCTGGACGTCAGTCATCATGCTCGTTaGTCTTCATGGGACAGGCTG +
Preference number: 4 (lower is better)
Translates to: VTYDTQLLRVNESQDLDVSHHAR*SSWDRL
Trigger: CAGCCTGTCCCATGAAGAGCAACGAGCATGATGACT...GACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGGTGTCATAGGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGAGTCATCATGCTCGTTaGTCTTCATGGGACAGGCTG +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWESHHAR*SSWDRL
Trigger: CAGCCTGTCCCATGAAGAGCAACGAGCATGATGACT...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGAAGAGAGTGCATGTCTaGTTGTCCAGGGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEKRVHV*LSREMS
Trigger: GCTCATCTCCCTGGACAAGCAGACATGCACTCTCTT...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCAAGGAGAAGAAGAGAGTaGATGTCTGCTTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPRRRRE*MSACPG
Trigger: CCCTGGACAAGCAGACATGCACTCTCTTCTTCTCCT...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCCCCAACGCTGTAGGTaGGCGAGTCGCGAGTCACCT +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVPQRCR*ASRESP
Trigger: AGGTGACTCGCGACTCGCGCACCTACAGCGTTGGGG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTTCCAGTTTCATTGATTaGAGCCGTCCAAAGGATGCC +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPSSFID*SRPKDA
Trigger: GGCATCCTTTGGACGGCTGCAATCAATGAAACTGGA...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGACGTAGTCCGCAGTTGTaGTACACCACAGCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERRSPQL*YTTASP
Trigger: GGGCGAAGCTGTGGTGTAGCACAACTGCGGACTACG...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACATGGTCCTTCTGCAAATaGTGGCCCTTTCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTWSFCK*WPFQSS
Trigger: GCTGCTCTGAAAGGGCCAGCATTTGCAGAAGGACCA...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACTTCTATCACGGAGGATaGGGTCTTATTTCCACCACA +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDFYHGG*GLISTT
Trigger: TGTGGTGGAAATAAGACCGCATCCTCCGTGATAGAA...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTATCAAACCTCTTGAATaGAGGTCTGCCCACCGTCTT +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATAIKPLE*RSAHRL
Trigger: AAGACGGTGGGCAGACCTGCATTCAAGAGGTTTGAT...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCAGCCCCTTGTGCATCTaGCCGTCGTCCCCGGGATTC +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLSPLCI*PSSPGF
Trigger: GAATCCCGGGGACGACGGGCAGATGCACAAGGGGCT...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCTGCCCTTCCTTTCCCTaGCGTGGAGGAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLCPSFP*RGGGSW
Trigger: CCAGCTGCCTCCTCCACGGCAGGGAAAGGAAGGGCA...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGATATGGCCGTTCTCCTaGCCTTCCTTTCCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLIWPFS*PSFPCR
Trigger: ACGGCAGGGAAAGGAAGGGCAGGAGAACGGCCATAT...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTATATGGCCGTTCTCCTaGCCTTCCTTTCCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSIWPFS*PSFPCR
Trigger: ACGGCAGGGAAAGGAAGGGCAGGAGAACGGCCATAT...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTTGGCAGGAAAGGCGCTaGCGCCAGAATAAGAACACC +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSWQERR*RQNKNT
Trigger: GGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCA...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCATGCTGCAGGGCGGTTTaGTTCTCAGCAATAGAACAC +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPCCRAV*FSAIEH
Trigger: GTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCA...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCGGGTTGGTCTTGCTGTaGCAAGGGTGCCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTGLVLL*QGCQRW
Trigger: CCACCTCTGGCACCCTTGGCACAGCAAGACCAACCC...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCATCTTGCAGGCTGCAGTaGTCCTCCACTCAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPSCRLQ*SSTQSS
Trigger: ACTACTTTGAGTGGAGGACCACTGCAGCCTGCAAGA...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACAAGAAGTTCTCAACACTaGTGCACTTTCCAGATCACC +
Preference number: 4 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTRSSQH*CTFQIT
Trigger: GGTGATCTGGAAAGTGCACCAGTGTTGAGAACTTCT...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GTCACCTATGACACCCAGCTTCTGCGTGTGAACGAGTCCCAGGACCTGGACGTCAAAGAAAACCCTGCCTaGGAGTCAAAGACCGTGCAG +
Preference number: 4 (lower is better)
Translates to: VTYDTQLLRVNESQDLDVKENPA*ESKTVQ
Trigger: CTGCACGGTCTTTGACTCCCAGGCAGGGTTTTCTTT...GACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGGTGTCATAGGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGTCCGACTGGCCTTGCTaGCTTCCAATTCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRSDWPC*LPILEL
Trigger: GAGCTCAAGAATTGGAAGCCAGCAAGGCCAGTCGGA...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCCATCAGCGGTACCTTTaGCAGAGAGAGGCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTHQRYL*QREALC
Trigger: ACAAAGGGCCTCTCTCTGCCAAAGGTACCGCTGATG...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGCATCAGCGGTACCTTTaGCAGAGAGAGGCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQHQRYL*QREALC
Trigger: ACAAAGGGCCTCTCTCTGCCAAAGGTACCGCTGATG...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCCAAGTTGCCATGCCTTaGGTCTTTCACCTCACAGTT +
Preference number: 4 (lower is better)
Translates to: LLKGIALCVSHWVGALCPQVAMP*VFHLTV
Trigger: AACTGTGAGGTGAAAGACCCAAGGCATGGCAACTTG...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGCACAGTAGAAGAAGATaGCTGTGGAGCGCTGATAAA +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMHSRRR*LWSADK
Trigger: TTTATCAGCGCTCCACAGCCATCTTCTTCTACTGTG...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACCACAGTAGAAGAAGATaGCTGTGGAGCGCTGATAAA +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDHSRRR*LWSADK
Trigger: TTTATCAGCGCTCCACAGCCATCTTCTTCTACTGTG...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTCTTGGGTTGGTGACCTaGCAGTCATCATGCTCGTTG +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISALGLVT*QSSCSL
Trigger: CAACGAGCATGATGACTGCCAGGTCACCAACCCAAG...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACACTTGGGTTGGTGACCTaGCAGTCATCATGCTCGTTG +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTLGLVT*QSSCSL
Trigger: CAACGAGCATGATGACTGCCAGGTCACCAACCCAAG...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCGCCGTCATCGGTTTCTaGAGGGCAACGATCACCATT +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTAVIGF*RATITI
Trigger: AATGGTGATCGTTGCCCTCCAGAAACCGATGACGGC...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACATCCTTCTGCAAATGCTaGCCCTTTCAGAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTSFCKC*PFQSSP
Trigger: TGGGCTGCTCTGAAAGGGCCAGCATTTGCAGAAGGA...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTCCTTCTGCAAATGCTaGCCCTTTCAGAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPSFCKC*PFQSSP
Trigger: TGGGCTGCTCTGAAAGGGCCAGCATTTGCAGAAGGA...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGAACGAGTCCCAGGACCTaGACGTCACCAGTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERTSPRT*TSPVVV
Trigger: GACCACAACTGGTGACGTCCAGGTCCTGGGACTCGT...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGTCGTTGGGCTTCACCTaGCATATGTTGGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQSLGFT*HMLAPE
Trigger: CTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGA...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTGACTTGGTGGTAATATaGCCGTTCTCCTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLDLVVI*PFSCPS
Trigger: GGAAGGGCAGGAGAACGGCCATATTACCACCAAGTC...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCACTTTCACCTCTGGGATaGTCAGAACCTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPLSPLG*SEPHPH
Trigger: GTGAGGATGAGGTTCTGACCATCCCAGAGGTGAAAG...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACACTGTGCGTTTCTCACTaGGTGGGAGCTCTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTLCVSH*VGALCP
Trigger: GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAG...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAGGAAGGACACCAGCTTaGTGGAGCTCACTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTGRTPA*WSSLSS
Trigger: AGAAGACAGTGAGCTCCACCAAGCTGGTGTCCTTCC...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAATCGTCGCTGTCGTCATaGAAGGACACCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQSSLSS*KDTSLV
Trigger: CACCAAGCTGGTGTCCTTCCATGACGACAGCGACGA...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACTTGGTTGGAGGTGCTTaGCTGTCCCGCGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHLVGGA*LSRGSV
Trigger: CACGGAGCCGCGGGACAGCCAAGCACCTCCAACCAA...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGAGTGGAAGTCTTATTTaGTTGGAGGTGCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMSGSLI*LEVLGC
Trigger: ACAGCCAAGCACCTCCAACCAAATAAGACTTCCACT...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGACAATCAGGAAGGAGTaGGGCCTGACCTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLTIRKE*GLTSFT
Trigger: GGTGAAGGAGGTCAGGCCCCACTCCTTCCTGATTGT...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTTCAAGATGGACAAACTaGTACATCACACCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATASRWTN*YITPLL
Trigger: CAGCAGGGGTGTGATGTACCAGTTTGTCCATCTTGA...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTAGCTTACCAAGGGGATaGGCAGGTCCCTGCATATGC +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSSLPRG*AGPCIC
Trigger: GCATATGCAGGGACCTGCCCATCCCCTTGGTAAGCT...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGTTAGCAGGCAGCCAGTaGTGCAGACAACATGCCTTT +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWELAGSQ*CRQHAF
Trigger: AAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAA...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCCCTAAAGCCGCTGGGTaGGGCAGGGCAAATCAGGCA +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTPKAAG*GRANQA
Trigger: TGCCTGATTTGCCCTGCCCCACCCAGCGGCTTTAGG...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTACCTGGAGGCCTGCTaGCCATTTTCTATTGTGATT +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMYLEAC*PFSIVI
Trigger: AATCACAATAGAAAATGGCCAGCAGGCCTCCAGGTA...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGAATTGCTGCCTACCTaGAGGCCTGCTGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQELLPT*RPAGHF
Trigger: AAAATGGCCAGCAGGCCTCCAGGTAGGCAGCAATTC...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAAAGGGAATTTCCCAGTaGATGGTCACAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTKGISQ*MVTGHQ
Trigger: CTGGTGGCCTGTGACCATCCACTGGGAAATTCCCTT...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAACCCAGCATGCTCCGTaGGAGCCTCTGGAAAACAAC +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQTQHAP*EPLENN
Trigger: GTTGTTTTCCAGAGGCTCCCACGGAGCATGCTGGGT...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTCGGCAGCAGGAACACTaGGACCCAAATCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSRQQEH*DPNLLL
Trigger: CAAGAGGAGATTTGGGTCCCAGTGTTCCTGCTGCCG...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CAA 72 bp ATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTaGCACACAAGCTCACCTGCACCACGACTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: ILSPTQCGYLAA*HTSSPAPRLPV
Trigger: AACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CAA 72 bp TGGGGACTCATCTGCACCACACCCAGATTCCAGCTATaGCCTTCTGACACTAAGCAAGACCCCACTGCGCTG +
Preference number: 4 (lower is better)
Translates to: WGLICTTPRFQL*PSDTKQDPTAL
Trigger: CAGCGCAGTGGGGTCTTGCTTAGTGTCAGAAGGCAATAGCTGGAATCTGGGTGTGGTGCAGATGAGTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CAA 72 bp GTGTCGTTGAGGCCCAGGGGCTTCAGGTCATACAAGTaGCCATGCCTTGGGTCTTTCACCTCACAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: VSLRPRGFRSYK*PCLGSFTSQLS
Trigger: GGACAACTGTGAGGTGAAAGACCCAAGGCATGGCAACTTGTATGACCTGAAGCCCCTGGGCCTCAACGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CAA 72 bp CGACCGCTTCATCCTGGTGCCTGTAATCCAGTTTCATaGATTGCAGCCGTCCAAAGGATGCCCCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: RPLHPGACNPVS*IAAVQRMPPWC
Trigger: GCACCAAGGGGGCATCCTTTGGACGGCTGCAATCAATGAAACTGGATTACAGGCACCAGGATGAAGCGGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACACATACAAACAGCACTTaGTGGCCCGCACTGGACAAT +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTHTNST*WPALDN
Trigger: ATTGTCCAGTGCGGGCCATCAAGTGCTGTTTGTATG...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GTCACCTATGACACCCAGCTTCTGCGTGTGAACGAGTCCCAGGACCTGGACGTCCCTGCTGCTTTGACTTaGGAGGTATCGCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: VTYDTQLLRVNESQDLDVPAALT*EVSLFF
Trigger: GAAAAAGAGCGATACCTCTCAAGTCAAAGCAGCAGG...GACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGGTGTCATAGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGATGACGCTCATCCGCTaGAACCCTGAGCTGCATTCA +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLMTLIR*NPELHS
Trigger: TGAATGCAGCTCAGGGTTTCAGCGGATGAGCGTCAT...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCGTCGTCCCCGGGATTCTCGCTGTCAAAGCCCACCCCCAGAGGACACACGGCTTTAATTTTCTTGCCATaGCCACAATCATCACCATCT +
Preference number: 4 (lower is better)
Translates to: PSSPGFSLSKPTPRGHTALIFLP*PQSSPS
Trigger: AGATGGTGATGATTGTGGTCATGGCAAGAAAATTAA...AGCCGTGTGTCCTCTGGGGGTGGGCTTTGACAGCGAGAATCCCGGGGACGACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGAATTTGAGGGGCCCTaGGTAAACATCATCATTGCA +
Preference number: 4 (lower is better)
Translates to: EHSVACSQASGVCQEKKREFEGP*VNIIIA
Trigger: TGCAATGATGATGTTTACTCAGGGCCCCTCAAATTC...TCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGCTTGATGCAGGAATTTaGGGGGCCCTGAGTAAACAT +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWELDAGI*GALSKH
Trigger: ATGTTTACTCAGGGCCCCTCAAATTCCTGCATCAAG...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTCCAGAGTCGATATCTTaGTGCAGGAATTTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPPESIS*CRNLRG
Trigger: GCCCCTCAAATTCCTGCATCAAGATATCGACTCTGG...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTGGTGAGCCCGATATCTaGGCACACTCAAACGTGATC +
Preference number: 4 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPGEPDI*AHSNVI
Trigger: GATCACGTTTGAGTGTGCTCAGATATCGGGCTCACC...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACTCACGATGGTGTCGTTaGGGCCCAGGGGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHSRWCR*GPGASG
Trigger: ACCTGAAGCCCCTGGGCCTCAACGACACCATCGTGA...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATAGCCCCATCTTTGAATaGACATTCAGTCAGATCGAA +
Preference number: 4 (lower is better)
Translates to: SVACSQASGVCQEKKRVHSPIFE*TFSQIE
Trigger: TTCGATCTGACTGAATGTTCATTCAAAGATGGGGCT...ATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAACACCTCTCTTACAGTaGAACGCGATGAGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQTPLLQ*NAMSEV
Trigger: CACCTCGCTCATCGCGTTTCACTGTAAGAGAGGTGT...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGTTCCAACTTTCCGACTaGAGTGCTGATCGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRFQLSD*SADRWA
Trigger: AGCCCAACGATCAGCACTTCAGTCGGAAAGTTGGAA...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACTCGTCCTCACGCTCCTaGAGGGCATTGCTCTGTGCG +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDSSSRS*RALLCA
Trigger: CGCACAGAGCAATGCCCTTCAGGAGCGTGAGGACGA...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTCGAGGCTCTGGCCCATaGTTTTTCATGCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPRGSGP*FFMQFL
Trigger: CAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCG...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTTGTAGGAATGCCTGGTaGTGGGAAGAAACTTCATCT +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPCRNAW*WEETSS
Trigger: AGATGAAGTTTCTTCCCATCACCAGGCATTCCTACA...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAAACAATGTCCAGAACTaGCAGCAAGTATGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: EHSVACSQASGVCQEKKRNNVQN*QQVWLK
Trigger: CTTGAGCCATACTTGCTGTCAGTTCTGGACATTGTT...TCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAGGCAGGAGAATCCCTTaGACCCGGGAGGCAGAGATT +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTGRRIP*TREAEI
Trigger: AATCTCTGCCTCCCGGGTTCAAGGGATTCTCCTGCC...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGTCACTCTCCCAGGTGTaGCAACCAATAACCCCATTC +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRSLSQV*QPITPF
Trigger: GAATGGGGTTATTGGTTGTCACACCTGGGAGAGTGA...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTTCACTCTCCCAGGTGTaGCAACCAATAACCCCATTC +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISASLSQV*QPITPF
Trigger: GAATGGGGTTATTGGTTGTCACACCTGGGAGAGTGA...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTCACACAGGAAGGCAATaGTGCTCTGGACTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISAHTGRQ*CSGLCD
Trigger: ATCACAGAGTCCAGAGCAGCATTGCCTTCCTGTGTG...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTGTCTTTCTTGCAGGCTaGAGTGGTCCTCCACTCAAA +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPVFLAG*SGPPLK
Trigger: TTTGAGTGGAGGACCACTGCAGCCTGCAAGAAAGAC...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAATGGAGACATCCTGCTaGTCGCCGCTCAGAGAACAA +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQMETSC*SPLREQ
Trigger: TTGTTCTCTGAGCGGCGAGCAGCAGGATGTCTCCAT...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTGTGGTATCTTCCTGCTaGTTTGACTTGAGAGGTATC +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATAVVSSC*FDLRGI
Trigger: GATACCTCTCAAGTCAAAGCAGCAGGAAGATACCAC...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGTTTCCCATCGTTACCTaGGGTTTTATTGCACTCAAA +
Preference number: 4 (lower is better)
Translates to: RSLARRPAACARRRRECMFPIVT*GFIALK
Trigger: TTTGAGTGCAATAAAACCGCAGGTAACGATGGGAAA...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACACTGTTTCCGTCTGACTaGCATCCACAGCTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTLFPSD*HPQLPN
Trigger: ATTGGGAAGCTGTGGATGGCAGTCAGACGGAAACAG...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTTCCATTTTTATCCACTaGACACACTGCCGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLSIFIH*THCRVL
Trigger: GAGGACGCGGCAGTGTGTGCAGTGGATAAAAATGGA...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGGCCACCTTCAGATTTTaGCAGACTGGAGAGGTCGTA +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRATFRF*QTGEVV
Trigger: TACGACCTCTCCAGTCTGGCAAAATCTGAAGGTGGC...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAATTCCAGAAGGAGGCTaGCGCTGTCCTCAACCACCG +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTIPEGG*RCPQPP
Trigger: CGGTGGTTGAGGACAGCGGCAGCCTCCTTCTGGAAT...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTTTCAGTTTGGGTTTCTaGCTCACAGCCAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISAFSLGF*LTARSR
Trigger: CCTGCTTCTGGCTGTGAGGCAGAAACCCAAACTGAA...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GTCACCTATGACACCCAGCTTCTGCGTGTGAACGAGTCCCAGGACCTGGACGTCAATTCCGACTGGCCTTaGTGGCTTCCAATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: VTYDTQLLRVNESQDLDVNSDWP*WLPILE
Trigger: CTCAAGAATTGGAAGCCAGCAAGGCCAGTCGGAATT...GACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGGTGTCATAGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCATACTGGCCGCTGGGTaGCGCGGTCACAGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTILAAG*RGHSRR
Trigger: TCTTCTACTGTGACCGCGGCACCCAGCGGCCAGTAT...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGACAGCAGACACGCGGCTaGTTCTGGAGGGCACGGCTC +
Preference number: 4 (lower is better)
Translates to: ILTLIISLITTSAMNKGRQQTRG*FWRARL
Trigger: GAGCCGTGCCCTCCAGAAGCAGCCGCGTGTCTGCTG...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTACCTGGCAGTCATCATaGTCGTTGCTCTTCATGGGA +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISATWQSS*SLLFMG
Trigger: TCCCATGAAGAGCAACGAGCATGATGACTGCCAGGT...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTAGCTGTTTGAGTGTCTaGAGAAGCCCCACTCGTGGT +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSSCLSV*RSPTRG
Trigger: ACCACGAGTGGGGCTTCTGCAGACACTCAAACAGCT...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTCAGTTGTGGTCCTTCTaGAAATGCTGGCCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLQLWSF*KCWPFQ
Trigger: CTGAAAGGGCCAGCATTTGCAGAAGGACCACAACTG...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTTTCTATCACGGAGGATaGGGTCTTATTTCCACCACA +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPFYHGG*GLISTT
Trigger: TGTGGTGGAAATAAGACCGCATCCTCCGTGATAGAA...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCAGCCCCTTGTGCATCTaGCCGTCGTCCCCGGGATTC +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALSPLCI*PSSPGF
Trigger: GAATCCCGGGGACGACGGGCAGATGCACAAGGGGCT...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GTCACCTATGACACCCAGCTTCTGCGTGTGAACGAGTCCCAGGACCTGGACGTCCCCTCTGTTTTGAGATaGGTCCGGCCTTATGCTTTT +
Preference number: 4 (lower is better)
Translates to: VTYDTQLLRVNESQDLDVPSVLR*VRPYAF
Trigger: AAAAGCATAAGGCCGGACGCATCTCAAAACAGAGGG...GACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGGTGTCATAGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACACAGCATGAGGCCAAGTaGAATGCTAGGGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTQHEAK*NARAEA
Trigger: AGCCTCGGCCCTAGCATTGCACTTGGCCTCATGCTG...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCCAGGCTGAGGGATGCTaGAGGGCGGTTTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTQAEGC*RAVCFS
Trigger: TGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAGCAGGTCCCTGCATATaGCCCTCCTTACAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTAGPCI*PSLQRG
Trigger: CCCTCTCTGTAAGGAGGGGCATATGCAGGGACCTGC...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACATCAATGTGGCTATCTTaGCGCCTTGCACACAAGCTC +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTSMWLS*RLAHKL
Trigger: GAGCTTGTGTGCAAGGCGGCAAGATAGCCACATTGA...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGTCCAAGTTCTGGGCTTaGTTCTGCCTTACCTATCCA +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWESKFWA*FCLTYP
Trigger: TGGATAGGTAAGGCAGAAGCAAGCCCAGAACTTGGA...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACACAGCCACAGCTCCCATaGCCAACCTCCCATCTGGTT +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTQPQLP*PTSHLV
Trigger: AACCAGATGGGAGGTTGGGCATGGGAGCTGTGGCTG...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTTTGAACCTGACTTCCTaGTTCCTTCCAGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLLNLTS*FLPGLC
Trigger: ACAGAGCCCTGGAAGGAAGCAGGAAGTCAGGTTCAA...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCTTCCACGGGGCACACTaGGAAAAATGTTTCTATATG +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSFHGAH*EKCFYM
Trigger: CATATAGAAACATTTTTCGCAGTGTGCCCCGTGGAA...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAATGTCTAGGAATTGCTaGCTACCTGGAGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQMSRNC*LPGGLL
Trigger: CAGCAGGCCTCCAGGTAGGCAGCAATTCCTAGACAT...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAACTGTTTGGGCCTCACTaGTCATCAACGGTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQLFGPH*SSTVWS
Trigger: AGACCACACCGTTGATGAGCAGTGAGGCCCAAACAG...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTCCTTTCACCAACATCTaGTCACTTCCTGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPPFTNI*SLPAPS
Trigger: AGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGG...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTACCACGTCCATGCAGTaGCAGCCTGCGGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAITTSMQ*QPAGPE
Trigger: CTCTGGCCCCGCAGGCTGGCACTGCATGGACGTGGT...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677704.1
CDS-3UTR CCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTCTTGATGGCCCGCACTaGACAATATCCACACTTCCA +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPLDGPH*TISTLP
Trigger: TGGAAGTGTGGATATTGTCCAGTGCGGGCCATCAAG...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATGGTCAGAACCTCATCCTTCTTGCAGGCTGCAGTaGTCCTCCACTCAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: QLPCPSELSPLGWSEPHPSCRLQ*SSTQSS
Trigger: ACTACTTTGAGTGGAGGACCACTGCAGCCTGCAAGA...AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTCCAACATCAAACGCCTaGTGTCCTCTTACCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPPTSNA*CPLTRQ
Trigger: CTGCCTGGTAAGAGGACACCAGGCGTTTGATGTTGG...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTAGAAGTTCTCAACACTaGTGCACTTTCCAGATCACC +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPRSSQH*CTFQIT
Trigger: GGTGATCTGGAAAGTGCACCAGTGTTGAGAACTTCT...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGATCACTTTTTGCCACCTaGCAGGCTCCTGAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERSLFAT*QAPESG
Trigger: GCCAGACTCAGGAGCCTGCCAGGTGGCAAAAAGTGA...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677704.1
CDS-3UTR CCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTCAGATTTTGCCAGACTaGAGAGGTCGTACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISAQILPD*RGRTAP
Trigger: TGGAGCAGTACGACCTCTCCAGTCTGGCAAAATCTG...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCTGGAGCAGACGAGATaGATCCTCGTGGTATATGTG +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRLEQTR*ILVVYV
Trigger: CACATATACCACGAGGATCCATCTCGTCTGCTCCAG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCTGTTCAGCCTGCCCCTaGAGCAGACGAGATGGATCC +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTCSACP*SRRDGS
Trigger: GGATCCATCTCGTCTGCTCCAGGGGCAGGCTGAACA...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGGACTTGGCAGTCCACTaGAGAAGGAACACAGGCCAA +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLDLAVH*RRNTGQ
Trigger: TTGGCCTGTGTTCCTTCTCCAGTGGACTGCCAAGTC...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACAAGAAGAAGATGGCTGTaGAGCGCTGATAAACCTTAT +
Preference number: 4 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTRRRWL*SADKPY
Trigger: ATAAGGTTTATCAGCGCTCCACAGCCATCTTCTTCT...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAACCAGCTGCAGGACCTaGTCCACGTATCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTTSCRT*STYLSL
Trigger: GAGGCTGAGATACGTGGACCAGGTCCTGCAGCTGGT...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTTGTAGAAATCAGGGTTaGTATCGGAGGCATCATCCT +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATACRNQG*YRRHHP
Trigger: AGGATGATGCCTCCGATACCAACCCTGATTTCTACA...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCTGTAGAAATCAGGGTTaGTATCGGAGGCATCATCCT +
Preference number: 4 (lower is better)
Translates to: LLKGIALCVSHWVGALCPCRNQG*YRRHHP
Trigger: AGGATGATGCCTCCGATACCAACCCTGATTTCTACA...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAAGGGCACTCCGTGCATaGGATTTAGTGGCTGACAAA +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTRALRA*DLVADK
Trigger: TTTGTCAGCCACTAAATCCCATGCACGGAGTGCCCT...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTGCCGTCATCGGTTTCTaGAGGGCAACGATCACCATT +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSAVIGF*RATITI
Trigger: AATGGTGATCGTTGCCCTCCAGAAACCGATGACGGC...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCTGATCGTTGGGCTTCACCTGGCATATGTTGGCTCCAGAGCACGCCGGGTTTCTTCACTGAAGACTTGTaGCCTCCCAATGTCCTCATC +
Preference number: 4 (lower is better)
Translates to: ADRWASPGICWLQSTPGFFTEDL*PPNVLI
Trigger: GATGAGGACATTGGGAGGCCACAAGTCTTCAGTGAA...GAAACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGATCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGCACTCCAACTTCTTTaGAGGGCAGACAACTTTTGT +
Preference number: 4 (lower is better)
Translates to: EHSVACSQASGVCQEKKRALQLL*RADNFC
Trigger: ACAAAAGTTGTCTGCCCTCCAAAGAAGTTGGAGTGC...TCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATCTTGAAGGTAGTACTTaGTCTTGTCAGAGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: SVACSQASGVCQEKKRVHLEGST*SCQRFQ
Trigger: TTGGAACCTCTGACAAGACCAAGTACTACCTTCAAG...ATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCCGTGGAGGAGGCAGCTaGATCTCTTCCATCAGCCAC +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTRGGGS*ISSISH
Trigger: GTGGCTGATGGAAGAGATCCAGCTGCCTCCTCCACG...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAGACTTGGTGGTAATATaGCCGTTCTCCTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQDLVVI*PFSCPS
Trigger: GGAAGGGCAGGAGAACGGCCATATTACCACCAAGTC...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGATCATCCTCACTGTCCTaGTCATCCCCATGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERSSSLS*SSPCRE
Trigger: CTCCCTGCATGGGGATGACCAGGACAGTGAGGATGA...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACGCGTTTCTCACTGGGTaGGAGCTCTCTGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHAFLTG*ELSAPA
Trigger: AGCTGGGGCAGAGAGCTCCCACCCAGTGAGAAACGC...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGGAAGTCTTATTTGGTTaGAGGTGCTTGGCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCREVLFG*RCLAVP
Trigger: CGGGACAGCCAAGCACCTCCAACCAAATAAGACTTC...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTGAAGTCTTATTTGGTTaGAGGTGCTTGGCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLEVLFG*RCLAVP
Trigger: CGGGACAGCCAAGCACCTCCAACCAAATAAGACTTC...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGAGAAGCATCATCGAGTaGAAGTCTTATTTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: RSLARRPAACARRRRECMRSIIE*KSYLVG
Trigger: TCCAACCAAATAAGACTTCCACTCGATGATGCTTCT...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGCTAGGGCCGAGGCTCTaGCCCATGATTTTTCATGCA +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLLGPRL*PMIFHA
Trigger: TGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAG...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAACAGGCTCCAAGTTCTaGGCTTGCTTCTGCCTTACC +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQTGSKF*ACFCLT
Trigger: GGTAAGGCAGAAGCAAGCCCAGAACTTGGAGCCTGT...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACACTCAAAAGCCCAATCTaGCCCTCCTACAGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTLKSPI*PSYSSQ
Trigger: TTGAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAG...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGAAAATTAGCCGGGCGTaGCAGTGCGTGCCTTTAATC +
Preference number: 4 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQKISRA*QCVPLI
Trigger: GATTAAAGGCACGCACTGCCACGCCCGGCTAATTTT...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CATGAGGAGACCACCTTGGACTTGTCACTTGTGGGGCAGACGTCTGAGGAAAGCCCAGATGACCTCACCTaGGTTGTGAGCCCCTCATTT +
Preference number: 4 (lower is better)
Translates to: HEETTLDLSLVGQTSEESPDDLT*VVSPSF
Trigger: AAATGAGGGGCTCACAACCCAGGTGAGGTCATCTGG...GCTTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR CCA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTCCAGATGACCTCACCTaGGTTGTGAGCCCCTCATTT +
Preference number: 4 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPPDDLT*VVSPSF
Trigger: AAATGAGGGGCTCACAACCCAGGTGAGGTCATCTGG...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTGAATTGCTGCCTACCTaGAGGCCTGCTGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSELLPT*RPAGHF
Trigger: AAAATGGCCAGCAGGCCTCCAGGTAGGCAGCAATTC...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CATGAGGAGACCACCTTGGACTTGTCACTTGTGGGGCAGACGTCTGAGGAAAGCGAATTGCTGCCTACCTaGAGGCCTGCTGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: HEETTLDLSLVGQTSEESELLPT*RPAGHF
Trigger: AAAATGGCCAGCAGGCCTCCAGGTAGGCAGCAATTC...GCTTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR CCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTAAGGGAATTTCCCAGTaGATGGTCACAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSKGISQ*MVTGHQ
Trigger: CTGGTGGCCTGTGACCATCCACTGGGAAATTCCCTT...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGTGCTCATCAACGGTGTaGTCTCATACAGACCACCCA +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRCSSTV*SHTDHP
Trigger: TGGGTGGTCTGTATGAGACCACACCGTTGATGAGCA...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCTTTGATATACCTGTTTaGGCCTCACTGCTCATCAAC +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVFDIPV*ASLLIN
Trigger: GTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCCATTCTCACCAAAGGTaGACAAGTGTTCGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSHSHQR*TSVRFS
Trigger: AGAAAAGCGAACACTTGTCCACCTTTGGTGAGAATG...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCTTCTTCTGCAAGACTTaGTATTCCACTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVFFCKT*YSTVCV
Trigger: CACACACACAGTGGAATACCAAGTCTTGCAGAAGAA...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGTCCTCTTGGCACCGCTaGTTTAGACAACTCACTTCA +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWESSWHR*FRQLTS
Trigger: TGAAGTGAGTTGTCTAAACCAGCGGTGCCAAGAGGA...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CAA 72 bp CACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTaGGTAACCACCATTCCACTCTCTGCTTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: HQHLLTSCTLWP*VTTIPLSASES
Trigger: GGACTCAGAAGCAGAGAGTGGAATGGTGGTTACCAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CAA 72 bp TTTTCATACTTCATCTGGCAAGCCGATGCATATCGGTaGCAGCCCGGCACTGGATTCAGAGGCCGACACACG +
Preference number: 4 (lower is better)
Translates to: FSYFIWQADAYR*QPGTGFRGRHT
Trigger: CGTGTGTCGGCCTCTGAATCCAGTGCCGGGCTGCAACCGATATGCATCGGCTTGCCAGATGAAGTATGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CAA 72 bp CTGGTGGAGAAGCGCTGGTTCCCACACTTGTCACCGTaGACATACATGATGCTCAAAGATCCATTCGCCGCG +
Preference number: 4 (lower is better)
Translates to: LVEKRWFPHLSP*TYMMLKDPFAA
Trigger: CGCGGCGAATGGATCTTTGAGCATCATGTATGTCAACGGTGACAAGTGTGGGAACCAGCGCTTCTCCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CAA 72 bp AGTTTCATTGATTGCAGCCGTCCAAAGGATGCCCCCTaGGTGCCTGAGAGCAGACAGACTCCTCCGTCCTTA +
Preference number: 4 (lower is better)
Translates to: SFIDCSRPKDAP*VPESRQTPPSL
Trigger: TAAGGACGGAGGAGTCTGTCTGCTCTCAGGCACCAAGGGGGCATCCTTTGGACGGCTGCAATCAATGAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
3UTR CAA 72 bp TCATCCCCATGCAGGGAGCTGAGGGCTTTCACTGACTaGGTGGTAATATGGCCGTTCTCCTGCCCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SSPCRELRAFTD*VVIWPFSCPSF
Trigger: AAAGGAAGGGCAGGAGAACGGCCATATTACCACCAAGTCAGTGAAAGCCCTCAGCTCCCTGCATGGGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCAGCTCACTGTTGTGTTaGATTCCAGGAGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTSSLLC*IPGEIW
Trigger: CCAGATCTCTCCTGGAATTCAACACAACAGTGAGCT...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTAGCTCACTGTTGTGTTaGATTCCAGGAGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISASSLLC*IPGEIW
Trigger: CCAGATCTCTCCTGGAATTCAACACAACAGTGAGCT...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGGAATATCGGAGGGTCTaGTTGTGGTATCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANREYRRV*LWYLPA
Trigger: AGCAGGAAGATACCACAATCAGACCCTCCGATATTC...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACATGCACTCAAAGTTTATaGCGCTCATCCGCTGAAACC +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTCTQSL*RSSAET
Trigger: GGTTTCAGCGGATGAGCGTCATAAACTTTGAGTGCA...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACTCAAAGTTTATaGCGCTCATCCGCTGAAACC +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPCTQSL*RSSAET
Trigger: GGTTTCAGCGGATGAGCGTCATAAACTTTGAGTGCA...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTATTCCGTGTCCCATGTaGAGAAGTAGGTGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISAIPCPM*RSRCSQ
Trigger: TTGACTGCACCTACTTCTTCACATGGGACACGGAAT...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCGCTCCTGAGTCTGGCTaGCAGGGGCTCACAGACACC +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTAPESG*QGLTDT
Trigger: GGTGTCTGTGAGCCCCTGTCAGCCAGACTCAGGAGC...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTGAGTTATCCTCTTCCTaGTATTCAGGGAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISAELSSS*YSGKPT
Trigger: AGTGGGCTTCCCTGAATATCAGGAAGAGGATAACTC...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAAGTATTTCCTCCACGTaGCATGTTCCCCTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTSISST*HVPLSC
Trigger: ACAACTCAGGGGAACATGTCACGTGGAGGAAATACT...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCATGGAAACCACTTCAGTaGAGGAGCCCTGATCTTTTT +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPWKPLQ*RSPDLF
Trigger: AAAAAGATCAGGGCTCCTTCACTGAAGTGGTTTCCA...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCGTATCCGTCGTTGTCTaGATGGGACAGGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTVSVVV*MGQAAS
Trigger: AGAGGCTGCCTGTCCCATTCAGACAACGACGGATAC...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCTTGATGCAGGAATTTaGGGGGCCCTGAGTAAACAT +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRLDAGI*GALSKH
Trigger: ATGTTTACTCAGGGCCCCTCAAATTCCTGCATCAAG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAACCAGAGTCGATATCTTaGTGCAGGAATTTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQPESIS*CRNLRG
Trigger: GCCCCTCAAATTCCTGCATCAAGATATCGACTCTGG...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCTTCCAGCCAGGTCGGTaGCTTGGCAGTCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALFQPGR*LGSPLE
Trigger: CTCCAGTGGACTGCCAAGTCACCGACCTGGCTGGAA...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAGACCTGCCACTTTGTaGAATCCCTGCGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVRPATL*NPCGSR
Trigger: GCGGGAACCGCAGGGATTTCACAAAGTGGCAGGTCT...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCAGCCCCATCTTTGAATaGACATTCAGTCAGATCGAA +
Preference number: 4 (lower is better)
Translates to: LLKGIALCVSHWVGALCPSPIFE*TFSQIE
Trigger: TTCGATCTGACTGAATGTTCATTCAAAGATGGGGCT...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACATGCCATCTCTCCACTaGGGTCCGTCCCTTACCCTG +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDMPSLH*GPSLTL
Trigger: CAGGGTAAGGGACGGACCTCAGTGGAGAGATGGCAT...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCATGCCATCTCTCCACTaGGGTCCGTCCCTTACCCTG +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLMPSLH*GPSLTL
Trigger: CAGGGTAAGGGACGGACCTCAGTGGAGAGATGGCAT...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGGAATCGGATGGTGGTTaGCTTTTTCCGAATCCCATC +
Preference number: 4 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRESDGG*LFPNPI
Trigger: GATGGGATTCGGAAAAAGTCAACCACCATCCGATTC...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGGCTGACAAATATTaGTGTAGAAATCAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: EHSVACSQASGVCQEKKRVADKY*CRNQGW
Trigger: CCAACCCTGATTTCTACATCAATATTTGTCAGCCAC...TCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CACAGCCAGAAGCAGGTTTTCCCAGGATGGTCCCACAGACAGGCATTGTGCCGCGTAATCCAGTTTCATTaGTTGCAGCCGTCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: HSQKQVFPGWSHRQALCRVIQFH*LQPSKG
Trigger: TCCTTTGGACGGCTGCAATCAATGAAACTGGATTAC...GCGGCACAATGCCTGTCTGTGGGACCATCCTGGGAAAACCTGCTTCTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR TCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCTCGCCCTGCTCTCTATaGTGCACTCCTCGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTSPCSL*CTPRSS
Trigger: AGAGCTACGAGGAGTGCATCATAGAGAGCAGGGCGA...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATGGGACCAGGACCCGGTaGGAGAGGAGAGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNGTRTR*ERRAAA
Trigger: TGCGGCTGCTCTCCTCTCTCACCGGGTCCTGGTCCC...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAACAACTTTGTCACCTATaGCACCCAGCTTCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQQLCHL*HPASAC
Trigger: ACACGCAGAAGCTGGGTGTCATAGGTGACAAAGTTG...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGACGATATCAAACCTCTTaGATGCAGGTCTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERRYQTS*MQVCPP
Trigger: CGGTGGGCAGACCTGCATTCAAGAGGTTTGATATCG...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTCAGTCGGCAGTCTCGTaGCTGAACTCGGGGATCCCG +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIQSAVS*LNSGIP
Trigger: CGGGATCCCCGAGTTCAGTCACGAGACTGCCGACTG...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCCCCCATGCAGGGAGCTaGGGGCTTTCACTGACTTGG +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALPHAGS*GLSLTW
Trigger: CCAAGTCAGTGAAAGCCCTCAGCTCCCTGCATGGGG...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCTCGTCCTCACGCTCCTaGAGGGCATTGCTCTGTGCG +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALSSSRS*RALLCA
Trigger: CGCACAGAGCAATGCCCTTCAGGAGCGTGAGGACGA...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGCTGTACGCCCAGGCTTaGAGATATCATGCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQLYAQA*RYHAKR
Trigger: CCTTTTTGCATGATATCTTCAAGCCTGGGCGTACAG...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCTGTACGCCCAGGCTTaGAGATATCATGCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRLYAQA*RYHAKR
Trigger: CCTTTTTGCATGATATCTTCAAGCCTGGGCGTACAG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTAGCCGGCAAAAATACTaGCAAATGTGCTCTGTACGC +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLSRQKY*QMCSVR
Trigger: GCGTACAGAGCACATTTGTCAGTATTTTTGCCGGCT...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GTCACCTATGACACCCAGCTTCTGCGTGTGAACGAGTCCCAGGACCTGGACGTCGAGAACCTGAAGAGATaGGACCTATACCCCAAATCT +
Preference number: 4 (lower is better)
Translates to: VTYDTQLLRVNESQDLDVENLKR*DLYPKS
Trigger: AGATTTGGGGTATAGGTCTCATCTCTTCAGGTTCTC...GACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGGTGTCATAGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCGTAAAGGTGGTATCATaGGAACCTGAAGAGATGAGA +
Preference number: 4 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPVKVVS*EPEEMR
Trigger: TCTCATCTCTTCAGGTTCTCATGATACCACCTTTAC...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTGTAAAGGTGGTATCATaGGAACCTGAAGAGATGAGA +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPVKVVS*EPEEMR
Trigger: TCTCATCTCTTCAGGTTCTCATGATACCACCTTTAC...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTAAAAGAGTCCAATTCTaGTTTGCTGTCACGGGATGT +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATAKRVQF*FAVTGC
Trigger: ACATCCCGTGACAGCAAATCAGAATTGGACTCTTTT...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAGGCATCTTAGTCGTGTaGAGGTCCTTGTTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTGILVV*RSLFVG
Trigger: TCCTACAAACAAGGACCTTCACACGACTAAGATGCC...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGATGAGTGTACCTCCCTaGGCCATGGGATTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLMSVPP*AMGFFR
Trigger: TCTGAAGAATCCCATGGCTCAGGGAGGTACACTCAT...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GTCACCTATGACACCCAGCTTCTGCGTGTGAACGAGTCCCAGGACCTGGACGTCAACAATGTCCAGAACTaGCAGCAAGTATGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: VTYDTQLLRVNESQDLDVNNVQN*QQVWLK
Trigger: CTTGAGCCATACTTGCTGTCAGTTCTGGACATTGTT...GACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGGTGTCATAGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCTCAAACTCCTTACTGTaGCAGTCACAACAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTSNSLL*QSQQAP
Trigger: TGGAGCCTGTTGTGACTGTCACAGTAAGGAGTTTGA...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAGGACTCTGTGATTTGTaGCTTGCTGGTCACAGCTCA +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQGLCDL*LAGHSS
Trigger: TGAGCTGTGACCAGCAAGGCACAAATCACAGAGTCC...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGACAGGAAGGCAATGCTaGTCTGGACTCTGTGATTTG +
Preference number: 4 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQTGRQC*SGLCDL
Trigger: CAAATCACAGAGTCCAGAGCAGCATTGCCTTCCTGT...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCGGACAAGCCTGTCCTTaGGCACCAGCTTCAGTCCGT +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLGQACP*APASVR
Trigger: ACGGACTGAAGCTGGTGCGCAAGGACAGGCTTGTCC...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACTTTCCCATCGTTACCTaGGGTTTTATTGCACTCAAA +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDFPIVT*GFIALK
Trigger: TTTGAGTGCAATAAAACCGCAGGTAACGATGGGAAA...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTATCCACTGCACACACTaGCGCGTCCTCGGGACACCC +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIIHCTH*RVLGTP
Trigger: GGGTGTCCCGAGGACGCGGCAGTGTGTGCAGTGGAT...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGTTCAGTTTGGGTTTCTaGCTCACAGCCAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLFSLGF*LTARSR
Trigger: CCTGCTTCTGGCTGTGAGGCAGAAACCCAAACTGAA...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GTCACCTATGACACCCAGCTTCTGCGTGTGAACGAGTCCCAGGACCTGGACGTCCCAGATTCCAGCTATTaGCTTCTGACACTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: VTYDTQLLRVNESQDLDVPDSSY*LLTLSK
Trigger: CTTGCTTAGTGTCAGAAGGCAATAGCTGGAATCTGG...GACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGGTGTCATAGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGCTGAGTCAGGAGACCTaGCACTTTGTGAAATCCCTG +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLLSQET*HFVKSL
Trigger: CAGGGATTTCACAAAGTGGCAGGTCTCCTGACTCAG...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCATTTCAGGACAATTATaGCATCTCTCCACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LLKGIALCVSHWVGALCPISGQL*HLSTEV
Trigger: GACCTCAGTGGAGAGATGGCATAATTGTCCTGAAAT...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCCATTCTCCCCACAGATaGTCATGTAAACCAACCCCT +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTHSPHR*SCKPTP
Trigger: AGGGGTTGGTTTACATGAGCATCTGTGGGGAGAATG...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CATGAGGAGACCACCTTGGACTTGTCACTTGTGGGGCAGACGTCTGAGGAAAGCGAGTATTGGTGGTCCTaGTACCCGGCCGATATCTAT +
Preference number: 4 (lower is better)
Translates to: HEETTLDLSLVGQTSEESEYWWS*YPADIY
Trigger: ATAGATATCGGCCGGGTAGCAGGACCACCAATACTC...GCTTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR GCA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACAGGATGCCCCCTTGGTaGCTGAGAGCAGACAGACTC +
Preference number: 4 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHRMPPW*LRADRL
Trigger: GAGTCTGTCTGCTCTCAGGCACCAAGGGGGCATCCT...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTCCAGTTTCATTGATTaGAGCCGTCCAAAGGATGCC +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPSSFID*SRPKDA
Trigger: GGCATCCTTTGGACGGCTGCAATCAATGAAACTGGA...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCGTAGTCCGCAGTTGTaGTACACCACAGCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVRSPQL*YTTASP
Trigger: GGGCGAAGCTGTGGTGTAGCACAACTGCGGACTACG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCATCAAACCTCTTGAATaGAGGTCTGCCCACCGTCTT +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTIKPLE*RSAHRL
Trigger: AAGACGGTGGGCAGACCTGCATTCAAGAGGTTTGAT...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTTCTGACAGCCCCTTGTaGATCTGCCCGTCGTCCCCG +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAISDSPL*ICPSSP
Trigger: CGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGA...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCCTGCCCCAGCTCCCCTaGCCGAGTGAACTTTCACCT +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALLPQLP*PSELSP
Trigger: AGGTGAAAGTTCACTCGGGCAGGGGAGCTGGGGCAG...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACCACTCGGGGACCCTGTaGACGTATGTGTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDHSGTL*TYVCVC
Trigger: GCACACACACACATACGTGCACAGGGTCCCCGAGTG...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACGCAGGTCCCTGCATATaGCCCTCCTTACAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDAGPCI*PSLQRG
Trigger: CCCTCTCTGTAAGGAGGGGCATATGCAGGGACCTGC...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp TCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATAAGAGTCAAAGCAAATaGACTCAAACGTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: SVACSQASGVCQEKKRVHKSQSK*TQTCCH
Trigger: GTGACAACACGTTTGAGTGCATTTGCTTTGACTCTT...ATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCGCTATCTTGCCGCCTTaGACACAAGCTCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTAILPP*TQAHLH
Trigger: GTGCAGGTGAGCTTGTGTGCAAGGCGGCAAGATAGC...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTTTCTGGGCTTGCTTCTaGCTTACCTATCCAACACCC +
Preference number: 4 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPFWACF*LTYPTP
Trigger: GGGTGTTGGATAGGTAAGGCAGAAGCAAGCCCAGAA...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTTTCTGGGCTTGCTTCTaGCTTACCTATCCAACACCC +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSFWACF*LTYPTP
Trigger: GGGTGTTGGATAGGTAAGGCAGAAGCAAGCCCAGAA...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTTTCCACGGGGCACACTaGGAAAAATGTTTCTATATG +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPFHGAH*EKCFYM
Trigger: CATATAGAAACATTTTTCGCAGTGTGCCCCGTGGAA...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTCAAATGTCTAGGAATTaGTGCCTACCTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSQMSRN*CLPGGL
Trigger: CAGGCCTCCAGGTAGGCAGCAATTCCTAGACATTTG...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCACTGTGTTTATGATGTaGATTTCCCTGATGATCAGC +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVTVFMM*ISLMIS
Trigger: GCTGATCATCAGGGAAATGCACATCATAAACACAGT...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCACTGTGTTTATGATGTaGATTTCCCTGATGATCAGC +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSTVFMM*ISLMIS
Trigger: GCTGATCATCAGGGAAATGCACATCATAAACACAGT...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGAATCATTCTTCGTCCTaGTGTTTCTCGGCCGAACCA +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRNHSSS*CFSAEP
Trigger: TGGTTCGGCCGAGAAACAGCAGGACGAAGAATGATT...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677704.1
CDS-3UTR GCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTTGCAGTTACGCAGAATaGAGAAATACGCACAGAGAT +
Preference number: 4 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCCSYAE*RNTHRD
Trigger: ATCTCTGTGCGTATTTCTGCATTCTGCGTAACTGCA...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR CCA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTAGTCCGTCCCGGGGCTaGCCAACATCAAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLSPSRG*PTSNAW
Trigger: CCAGGCGTTTGATGTTGGCCAGCCCCGGGACGGACT...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACTCGCTCTTTTTCACTTaGCAAACTGCAGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDSLFFT*QTAACF
Trigger: AAAACAAGCTGCAGTTTGCCAAGTGAAAAAGAGCGA...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGCAGATTTTGCCAGACTaGAGAGGTCGTACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLQILPD*RGRTAP
Trigger: TGGAGCAGTACGACCTCTCCAGTCTGGCAAAATCTG...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCTTTTCATACTTCATCTaGCAAGCCGATGCATATCGG +
Preference number: 4 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPFSYFI*QADAYR
Trigger: CCGATATGCATCGGCTTGCCAGATGAAGTATGAAAA...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGACGAGGTTCACGGGCTTaGAGCCACCCAGCAGACACG +
Preference number: 4 (lower is better)
Translates to: ILTLIISLITTSAMNKGRRGSRA*SHPADT
Trigger: CGTGTCTGCTGGGTGGCTCCAAGCCCGTGAACCTCG...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCAGGTGTCCTGTGCTTaGGTTGGTGACCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVQVSCA*VGDLAV
Trigger: GACTGCCAGGTCACCAACCCAAGCACAGGACACCTG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCGCCTATTGGTTGGCCTaGCCTCAGGCCTGCACACGA +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALAYWLA*PQACTR
Trigger: TCGTGTGCAGGCCTGAGGCCAGGCCAACCAATAGGC...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAAGGGCACTCCGTGCATaGGATTTAGTGGCTGACAAA +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQRALRA*DLVADK
Trigger: TTTGTCAGCCACTAAATCCCATGCACGGAGTGCCCT...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCACAGCCTCCTTGTTCTaGCCCGACTGCAAAGGTGCA +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTTASLF*PDCKGA
Trigger: TGCACCTTTGCAGTCGGGCCAGAACAAGGAGGCTGT...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTTCACTGAAGACTTGTaGCCTCCCAATGTCCTCATC +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPFTEDL*PPNVLI
Trigger: GATGAGGACATTGGGAGGCCACAAGTCTTCAGTGAA...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCAGTGGAAGAAGATGGTaGAAGAAACAGACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: LLKGIALCVSHWVGALCPSGRRW*KKQTWS
Trigger: AGACCAAGTCTGTTTCTTCCACCATCTTCTTCCACT...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTTTCTCCTACAGCAAGTaGTCAGCTTACTTATCACTG +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATAFSYSK*SAYLSL
Trigger: CAGTGATAAGTAAGCTGACCACTTGCTGTAGGAGAA...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACATCATCCTCACTGTCCTaGTCATCCCCATGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTSSSLS*SSPCRE
Trigger: CTCCCTGCATGGGGATGACCAGGACAGTGAGGATGA...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCCTGTGCGTTTCTCACTaGGTGGGAGCTCTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALLCVSH*VGALCP
Trigger: GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAG...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACATCTGCTGTGCAGAGCTaGACTTCCCTTTCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTSAVQS*TSLSSP
Trigger: AGGCGAGGAAAGGGAAGTCCAGCTCTGCACAGCAGA...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATAGAAGCATCATCGAGTaGAAGTCTTATTTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: SVACSQASGVCQEKKRVHRSIIE*KSYLVG
Trigger: TCCAACCAAATAAGACTTCCACTCGATGATGCTTCT...ATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACCCTCAGGAGAGGTATTaGAAAGTCCTTAAGAATAAC +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDPQERY*KVLKNN
Trigger: GTTATTCTTAAGGACTTTCCAATACCTCTCCTGAGG...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGTGTCTCTGTCATTCATaGACAGTCTCAAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWECLCHS*TVSRKG
Trigger: CCCCTTTCTTGAGACTGTCCATGAATGACAGAGACA...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCATGTCTCTGTCATTCATaGACAGTCTCAAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPCLCHS*TVSRKG
Trigger: CCCCTTTCTTGAGACTGTCCATGAATGACAGAGACA...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GCTGATCGTTGGGCTTCACCTGGCATATGTTGGCTCCAGAGCACGCCGGGTTTCTGGATTTCCTTGGTGTaGGGTTTGCCTATTCCATCT +
Preference number: 4 (lower is better)
Translates to: ADRWASPGICWLQSTPGFWISLV*GLPIPS
Trigger: AGATGGAATAGGCAAACCCCACACCAAGGAAATCCA...GAAACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTTACCTCCCTGAGCCATaGGATTCTTCAGAGTCAGTA +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISAYLPEP*DSSESV
Trigger: TACTGACTCTGAAGAATCCCATGGCTCAGGGAGGTA...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTACCTCCCTGAGCCATaGGATTCTTCAGAGTCAGTA +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPYLPEP*DSSESV
Trigger: TACTGACTCTGAAGAATCCCATGGCTCAGGGAGGTA...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTCATGTGTCAAGGTCATaGAGGTTACAGAAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCHVSRS*RLQKGE
Trigger: TTCTCCTTTCTGTAACCTCCATGACCTTGACACATG...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CAA 72 bp AACCCTGAAGCCAAGGGTGAGGTCACAAGTCCTTTCTaGAACCTGACTTCCTGCTTCCTTCCAGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: NPEAKGEVTSPF*NLTSCFLPGLC
Trigger: ACAGAGCCCTGGAAGGAAGCAGGAAGTCAGGTTCAAGAAAGGACTTGTGACCTCACCCTTGGCTTCAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CAA 72 bp TTTCCTGACATGAGGAGACCACCTTGGACTTGTCACTaGTGGGGCAGACGTCTGAGGAAAGCTTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: FPDMRRPPWTCH*WGRRLRKASHR
Trigger: TCTGTGGGAAGCTTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATGTCAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CAA 72 bp GCACGCCGGGTTTCTGGAGCTTGTGATGGAGGAAAGTaGGATCTCATACAGGTAGTTGTCCCCATTGGTCCT +
Preference number: 4 (lower is better)
Translates to: ARRVSGACDGGK*DLIQVVVPIGP
Trigger: AGGACCAATGGGGACAACTACCTGTATGAGATCCAACTTTCCTCCATCACAAGCTCCAGAAACCCGGCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGGTCACCGCAGGGCTGTaGCCATCACAAAAGTCTAGC +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVVTAGL*PSQKSS
Trigger: GCTAGACTTTTGTGATGGTCACAGCCCTGCGGTGAC...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCTCTGGGCAAGTGGTGTaGGGTCTATGGAGACATCCT +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTSGQVV*GLWRHP
Trigger: AGGATGTCTCCATAGACCTCACACCACTTGCCCAGA...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTCAAAATATATCAAGGTaGGGTCTCCATCCGAATATC +
Preference number: 4 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPQNISR*GLHPNI
Trigger: GATATTCGGATGGAGACCTCACCTTGATATATTTTG...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAGAGTTATCCTCTTCCTaGTATTCAGGGAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQELSSS*YSGKPT
Trigger: AGTGGGCTTCCCTGAATATCAGGAAGAGGATAACTC...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGAGCCCCATCTTTGAATaGACATTCAGTCAGATCGAA +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWESPIFE*TFSQIE
Trigger: TTCGATCTGACTGAATGTTCATTCAAAGATGGGGCT...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGTGCCAGCCCCATCTTTaGATGAACATTCAGTCAGAT +
Preference number: 4 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRCQPHL*MNIQSD
Trigger: ATCTGACTGAATGTTCATTCAAAGATGGGGCTGGCA...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTGAATCGGATGGTGGTTaGCTTTTTCCGAATCCCATC +
Preference number: 4 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPESDGG*LFPNPI
Trigger: GATGGGATTCGGAAAAAGTCAACCACCATCCGATTC...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCCTGTGCTTGGGTTGGTaGCCTGGCAGTCATCATGCT +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLLCLGW*PGSHHA
Trigger: AGCATGATGACTGCCAGGTCACCAACCCAAGCACAG...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACTCGCCCTGCTCTCTATaGTGCACTCCTCGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHSPCSL*CTPRSS
Trigger: AGAGCTACGAGGAGTGCATCATAGAGAGCAGGGCGA...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACACCCACGCACTTCACTaGAGACTTGTGGCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHTHALH*RLVASQ
Trigger: TTGGGAGGCCACAAGTCTTCAGTGAAGTGCGTGGGT...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GTGGAAGAAGATGGTGGAAGAAACAGACTTGGTCTTATCCTTTCCGCACTTAGACCCAGCTTCTGCGTGTaGACGAGTCCCAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: VEEDGGRNRLGLILSALRPSFCV*TSPRTW
Trigger: CCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGG...TCTAAGTGCGGAAAGGATAAGACCAAGTCTGTTTCTTCCACCATCTTCTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTTTTGGGCAGGTTGTTTaGATTCACCAGCCGGCAAAA +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSFGQVV*IHQPAK
Trigger: TTTTGCCGGCTGGTGAATTCAAACAACCTGCCCAAA...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGGTAAAGGTGGTATCATaGGAACCTGAAGAGATGAGA +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEVKVVS*EPEEMR
Trigger: TCTCATCTCTTCAGGTTCTCATGATACCACCTTTAC...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GTCACCTATGACACCCAGCTTCTGCGTGTGAACGAGTCCCAGGACCTGGACGTCCTATATGTTCCTTCCTaGGGAATCATCTCGTGTTAC +
Preference number: 4 (lower is better)
Translates to: VTYDTQLLRVNESQDLDVLYVPS*GIISCY
Trigger: GTAACACGAGATGATTCCTCAGGAAGGAACATATAG...GACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGGTGTCATAGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTGGCATCTTAGTCGTGTaGAGGTCCTTGTTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSGILVV*RSLFVG
Trigger: TCCTACAAACAAGGACCTTCACACGACTAAGATGCC...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGCACACTGGCTCCTTGTaGCCCGATCGCCAACAGGGG +
Preference number: 4 (lower is better)
Translates to: IGPHVPRGSEQLKINISEHTGSL*PDRQQG
Trigger: CCCCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTG...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTGCCTCGCAGGCAGTCTaGGGCTTCTCAGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVASQAV*GFSAQH
Trigger: GTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGC...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCGAGGCAGGTGGATCATaGGGTCAGGAGATCGAGACC +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALEAGGS*GQEIET
Trigger: GGTCTCGATCTCCTGACCTCATGATCCACCTGCCTC...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCACCTCACCTGGGTTGTaGGCCCCTCATTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTTSPGL*APHFHS
Trigger: AGAGTGAAAATGAGGGGCTCACAACCCAGGTGAGGT...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCCCATTCTGGCAGGTGTaGGGCAACGTCTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLPFWQV*GNVSLC
Trigger: ACACAGTGAGACGTTGCCTCACACCTGCCAGAATGG...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGCCACTGAATGATAAGTaGGTGTCTTCAAGTCGTGCA +
Preference number: 4 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRPLNDK*VSSSRA
Trigger: TGCACGACTTGAAGACACGCACTTATCATTCAGTGG...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTTGCCATCGCTGGTGGTaGAGGCCGACCCATTCACGT +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAICHRWW*RPTHSR
Trigger: ACGTGAATGGGTCGGCCTGCACCACCAGCGATGGCA...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTTCAGGTCATACAAGTTaGCATGCCTTGGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISASGHTS*HALGLS
Trigger: TGAAAGACCCAAGGCATGGCAACTTGTATGACCTGA...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTGTCCGTCCCTTACCCTaGCGAGGTTCACGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVVRPLP*RGSRAW
Trigger: CCAAGCCCGTGAACCTCGGCAGGGTAAGGGACGGAC...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCAATTTCAGGACAATTATaGCATCTCTCCACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPISGQL*HLSTEV
Trigger: GACCTCAGTGGAGAGATGGCATAATTGTCCTGAAAT...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGAAGGAGAAGAAGAGAGTaGATGTCTGCTTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERRRRRE*MSACPG
Trigger: CCCTGGACAAGCAGACATGCACTCTCTTCTTCTCCT...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTGCCCGACTGCAAAGGTaGACACCCCAACGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLARLQR*TPQRCR
Trigger: CCTACAGCGTTGGGGTGTGCACCTTTGCAGTCGGGC...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCGCCCGACTGCAAAGGTaGACACCCCAACGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTARLQR*TPQRCR
Trigger: CCTACAGCGTTGGGGTGTGCACCTTTGCAGTCGGGC...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCAGGATGCCCCCTTGGTaGCTGAGAGCAGACAGACTC +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALRMPPW*LRADRL
Trigger: GAGTCTGTCTGCTCTCAGGCACCAAGGGGGCATCCT...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGGTTTCTGGACGAATTTaGACTCCAACTTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEVSGRI*TPTSLE
Trigger: CTCCAAAGAAGTTGGAGTGCAAATTCGTCCAGAAAC...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACATGGTCCTTCTGCAAATaGTGGCCCTTTCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTWSFCK*WPFQSS
Trigger: GCTGCTCTGAAAGGGCCAGCATTTGCAGAAGGACCA...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATGGTCAGAACCTCATCCTTTCTATCACGGAGGATaGGGTCTTATTTCCACCACA +
Preference number: 4 (lower is better)
Translates to: QLPCPSELSPLGWSEPHPFYHGG*GLISTT
Trigger: TGTGGTGGAAATAAGACCGCATCCTCCGTGATAGAA...AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGATATGGCCGTTCTCCTaGCCTTCCTTTCCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVIWPFS*PSFPCR
Trigger: ACGGCAGGGAAAGGAAGGGCAGGAGAACGGCCATAT...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTCTGCCCCAGCTCCCCTaGCCGAGTGAACTTTCACCT +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAILPQLP*PSELSP
Trigger: AGGTGAAAGTTCACTCGGGCAGGGGAGCTGGGGCAG...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACTTATTTGGTTGGAGGTaGTTGGCTGTCCCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDLFGWR*LAVPRL
Trigger: GAGCCGCGGGACAGCCAAGCACCTCCAACCAAATAA...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAACTGGAGTAACTTCCTaGTTCCATGCAGGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQTGVTS*FHAGSS
Trigger: AGAGCTACCTGCATGGAAGCAGGAAGTTACTCCAGT...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACGCCCCCTGGGTAGAATaGCTGAGGACCAGCATCTTT +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDAPWVE*LRTSIF
Trigger: AAAGATGCTGGTCCTCAGGCATTCTACCCAGGGGGC...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTAAGAGTCAAAGCAAATaGACTCAAACGTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATAKSQSK*TQTCCH
Trigger: GTGACAACACGTTTGAGTGCATTTGCTTTGACTCTT...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGAGTCCAATTCTGATTTaGTGTCACGGGATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWESPILI*CHGMFS
Trigger: GGAAAACATCCCGTGACAGCAAATCAGAATTGGACT...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp TGCCTCACAGCCAGAAGCAGGTTTTCCCAGGATGGTCCCACAGACAGGCATTGTGCAATGAACAGGGGCTaGAGAGATCTCTTCAAGGTA +
Preference number: 4 (lower is better)
Translates to: CLTARSRFSQDGPTDRHCAMNRG*RDLFKV
Trigger: TACCTTGAAGAGATCTCTGCAGCCCCTGTTCATTGC...ACAATGCCTGTCTGTGGGACCATCCTGGGAAAACCTGCTTCTGGCTGTGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR GCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCTCACTTCATTTGAACTaGAGTTACGCAGAATGCAGA +
Preference number: 4 (lower is better)
Translates to: LLKGIALCVSHWVGALCPSLHLN*SYAECR
Trigger: TCTGCATTCTGCGTAACTGCAGTTCAAATGAAGTGA...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR CCA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCATCAAACACATAGCATaGCACCTCCTTATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSIKHIA*HLLICF
Trigger: AAAGCAAATAAGGAGGTGCCATGCTATGTGTTTGAT...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCATCAAACACATAGCATaGCACCTCCTTATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVIKHIA*HLLICF
Trigger: AAAGCAAATAAGGAGGTGCCATGCTATGTGTTTGAT...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGGATGAACCTCCGCTCTaGGCAAGTGGTGTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVDEPPL*ASGVRS
Trigger: AGACCTCACACCACTTGCCCAGAGCGGAGGTTCATC...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACGATGAACCTCCGCTCTaGGCAAGTGGTGTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDDEPPL*ASGVRS
Trigger: AGACCTCACACCACTTGCCCAGAGCGGAGGTTCATC...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCTCGCTCTTTTTCACTTaGCAAACTGCAGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LLKGIALCVSHWVGALCPSLFFT*QTAACF
Trigger: AAAACAAGCTGCAGTTTGCCAAGTGAAAAAGAGCGA...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCTCGCTCTTTTTCACTTaGCAAACTGCAGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPSLFFT*QTAACF
Trigger: AAAACAAGCTGCAGTTTGCCAAGTGAAAAAGAGCGA...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GTCACCTATGACACCCAGCTTCTGCGTGTGAACGAGTCCCAGGACCTGGACGTCACTTTCCAGATCACCTaGCTTGCATACAAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: VTYDTQLLRVNESQDLDVTFQIT*LAYKCD
Trigger: ATCACACTTGTATGCAAGCCAGGTGATCTGGAAAGT...GACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGGTGTCATAGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGACTTTCCAGATCACCTaGCTTGCATACAAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWETFQIT*LAYKCD
Trigger: ATCACACTTGTATGCAAGCCAGGTGATCTGGAAAGT...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAGTTGCAGCCCGGCACTaGATTCAGAGGCCGACACAC +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRVAARH*IQRPTH
Trigger: GTGTGTCGGCCTCTGAATCCAGTGCCGGGCTGCAAC...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCGTTGCAGCCCGGCACTaGATTCAGAGGCCGACACAC +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTVAARH*IQRPTH
Trigger: GTGTGTCGGCCTCTGAATCCAGTGCCGGGCTGCAAC...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAGTCTGCCATCGCTGGTaGTGCAGGCCGACCCATTCA +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRVCHRW*CRPTHS
Trigger: TGAATGGGTCGGCCTGCACCACCAGCGATGGCAGAC...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTTTTCTCAATTCCGACTaGCCTTGCTGGCTTCCAATT +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLFLNSD*PCWLPI
Trigger: AATTGGAAGCCAGCAAGGCCAGTCGGAATTGAGAAA...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCAAGAAGAAGATGGCTGTaGAGCGCTGATAAACCTTAT +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPRRRWL*SADKPY
Trigger: ATAAGGTTTATCAGCGCTCCACAGCCATCTTCTTCT...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTCACAGTAGAAGAAGATaGCTGTGGAGCGCTGATAAA +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISAHSRRR*LWSADK
Trigger: TTTATCAGCGCTCCACAGCCATCTTCTTCTACTGTG...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCCTTGGGTTGGTGACCTaGCAGTCATCATGCTCGTTG +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTLGLVT*QSSCSL
Trigger: CAACGAGCATGATGACTGCCAGGTCACCAACCCAAG...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGAATCTCATTTGCTATTaGATTGAGTATTGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMNLICY*IEYWWS
Trigger: GGACCACCAATACTCAATCCAATAGCAAATGAGATT...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGGCACTCCAACTTCTTTaGAGGGCAGACAACTTTTGT +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRALQLL*RADNFC
Trigger: ACAAAAGTTGTCTGCCCTCCAAAGAAGTTGGAGTGC...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTTACGAGACTCCGTTGTaGACGAGGGACCAGGACCCG +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIYETPL*TRDQDP
Trigger: CGGGTCCTGGTCCCTCGTCCACAACGGAGTCTCGTA...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCTCACCTGGCATATGTTaGCTCCAGAGCACGCCGGGT +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALSPGIC*LQSTPG
Trigger: ACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGA...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCTCGTTGGGCTTCACCTaGCATATGTTGGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTSLGFT*HMLAPE
Trigger: CTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGA...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGTCATCCTCACTGTCCTaGTCATCCCCATGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVSSSLS*SSPCRE
Trigger: CTCCCTGCATGGGGATGACCAGGACAGTGAGGATGA...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAGCGTTTCTCACTGGGTaGGAGCTCTCTGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRAFLTG*ELSAPA
Trigger: AGCTGGGGCAGAGAGCTCCCACCCAGTGAGAAACGC...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTCTGTGCGTTTCTCACTaGGTGGGAGCTCTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAILCVSH*VGALCP
Trigger: GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAG...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCAGTGGAAGTCTTATTTaGTTGGAGGTGCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTSGSLI*LEVLGC
Trigger: ACAGCCAAGCACCTCCAACCAAATAAGACTTCCACT...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGAGTGGAAGTCTTATTTaGTTGGAGGTGCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRSGSLI*LEVLGC
Trigger: ACAGCCAAGCACCTCCAACCAAATAAGACTTCCACT...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCCTTGGGGCAAAACCCTaGGCACAAGGTACCGCCCTG +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTLGAKP*AQGTAL
Trigger: CAGGGCGGTACCTTGTGCCCAGGGTTTTGCCCCAAG...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCACCACACCCCGAGGTTaGCCTGGAGAAGGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTTTPRG*PGEGKE
Trigger: TTCTTTACCTTCTCCAGGCCAACCTCGGGGTGTGGT...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCGAGGTGGGAATGGCCTaGAGAACAGCCCCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTEVGMA*RTAPWV
Trigger: TACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTC...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCATCTTTAATCACCAGGTaGCATCTTAGTCGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPSLITR*HLSRVK
Trigger: CTTCACACGACTAAGATGCCACCTGGTGATTAAAGA...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCGTCCCCAACTCAATGTaGCTATCTTGCCGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTVPNSM*LSCRLA
Trigger: TGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGAC...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACACCAGATGACCTCACCTaGGTTGTGAGCCCCTCATTT +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTPDDLT*VVSPSF
Trigger: AAATGAGGGGCTCACAACCCAGGTGAGGTCATCTGG...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACATACCTGGAGGCCTGCTaGCCATTTTCTATTGTGATT +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTYLEAC*PFSIVI
Trigger: AATCACAATAGAAAATGGCCAGCAGGCCTCCAGGTA...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGTACCTGGAGGCCTGCTaGCCATTTTCTATTGTGATT +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRYLEAC*PFSIVI
Trigger: AATCACAATAGAAAATGGCCAGCAGGCCTCCAGGTA...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCAAGGGAATTTCCCAGTaGATGGTCACAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTKGISQ*MVTGHQ
Trigger: CTGGTGGCCTGTGACCATCCACTGGGAAATTCCCTT...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGTTTGATATACCTGTTTaGGCCTCACTGCTCATCAAC +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEFDIPV*ASLLIN
Trigger: GTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGCATTCTCACCAAAGGTaGACAAGTGTTCGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEHSHQR*TSVRFS
Trigger: AGAAAAGCGAACACTTGTCCACCTTTGGTGAGAATG...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTAGCACTGATTTACCCTaGGCCATACTAGGGATCAAC +
Preference number: 4 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPSTDLP*AILGIN
Trigger: GTTGATCCCTAGTATGGCCCAGGGTAAATCAGTGCT...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677704.1
CDS-3UTR TCA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGCAAAATATATCAAGGTaGGGTCTCCATCCGAATATC +
Preference number: 4 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEQNISR*GLHPNI
Trigger: GATATTCGGATGGAGACCTCACCTTGATATATTTTG...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCATGACGCTCATCCGCTaGAACCCTGAGCTGCATTCA +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLMTLIR*NPELHS
Trigger: TGAATGCAGCTCAGGGTTTCAGCGGATGAGCGTCAT...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAATGGAAACCACTTCAGTaGAGGAGCCCTGATCTTTTT +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQWKPLQ*RSPDLF
Trigger: AAAAAGATCAGGGCTCCTTCACTGAAGTGGTTTCCA...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTGAATTTGAGGGGCCCTaGGTAAACATCATCATTGCA +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSEFEGP*VNIIIA
Trigger: TGCAATGATGATGTTTACTCAGGGCCCCTCAAATTC...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAGAATTTGAGGGGCCCTaGGTAAACATCATCATTGCA +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQEFEGP*VNIIIA
Trigger: TGCAATGATGATGTTTACTCAGGGCCCCTCAAATTC...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGATGTCCCCTTCCACTCTaGCAACGGGACAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: ILTLIISLITTSAMNKGRCPLPL*QRDRLP
Trigger: TGGAAGCCTGTCCCGTTGTCAGAGTGGAAGGGGACA...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTAGACCTGCCACTTTGTaGAATCCCTGCGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIRPATL*NPCGSR
Trigger: GCGGGAACCGCAGGGATTTCACAAAGTGGCAGGTCT...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGCATTTGCTATTGGATTaGGTATTGGTGGTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRHLLLD*VLVVLL
Trigger: TAGCAGGACCACCAATACTCAATCCAATAGCAAATG...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTCGGCAGTCTCGTGACTaGACTCGGGGATCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: ITTSAMNKGRQVNNRASIRQSRD*TRGSRP
Trigger: AGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCG...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTTTCCTTATTCACCTTTaGGTATTTGTAGGACACGTT +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATAFLIHL*VFVGHV
Trigger: AACGTGTCCTACAAATACTCAAAGGTGAATAAGGAA...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTTTCCTTATTCACCTTTaGGTATTTGTAGGACACGTT +
Preference number: 4 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCFLIHL*VFVGHV
Trigger: AACGTGTCCTACAAATACTCAAAGGTGAATAAGGAA...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACGCTGAGGGCTTTCACTaGCTTGGTGGTAATATGGCC +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDAEGFH*LGGNMA
Trigger: GGCCATATTACCACCAAGTCAGTGAAAGCCCTCAGC...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGGCTCCCCTGCCCGAGTaGACTTTCACCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: IGPHVPRGSEQLKINISEAPLPE*TFTSGM
Trigger: CATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGC...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCAGCTGCCCCATACACTaGCAGCCTCACCATCTCAAG +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALSCPIH*QPHHLK
Trigger: CTTGAGATGGTGAGGCTGTCAGTGTATGGGGCAGCT...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCAAAAATTCATTTTCTCTaGCACCTCAACTCCACTCAC +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPKIHFL*HLNSTH
Trigger: GTGAGTGGAGTTGAGGTGTCAGAGAAAATGAATTTT...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTAAAAGAGTCCAATTCTaGTTTGCTGTCACGGGATGT +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLKRVQF*FAVTGC
Trigger: ACATCCCGTGACAGCAAATCAGAATTGGACTCTTTT...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTCTATATGTTCCTTCCTaGGGAATCATCTCGTGTTAC +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLLYVPS*GIISCY
Trigger: GTAACACGAGATGATTCCTCAGGAAGGAACATATAG...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTCTATATGTTCCTTCCTaGGGAATCATCTCGTGTTAC +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPLYVPS*GIISCY
Trigger: GTAACACGAGATGATTCCTCAGGAAGGAACATATAG...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGAGGCAGGAGAATCCCTTaGACCCGGGAGGCAGAGATT +
Preference number: 4 (lower is better)
Translates to: ILTLIISLITTSAMNKGRGRRIP*TREAEI
Trigger: AATCTCTGCCTCCCGGGTTCAAGGGATTCTCCTGCC...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAGAGGCAGGTGGATCATaGGGTCAGGAGATCGAGACC +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYREAGGS*GQEIET
Trigger: GGTCTCGATCTCCTGACCTCATGATCCACCTGCCTC...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTGAGGCAGGTGGATCATaGGGTCAGGAGATCGAGACC +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIEAGGS*GQEIET
Trigger: GGTCTCGATCTCCTGACCTCATGATCCACCTGCCTC...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTAGAAATACAAATAACTaGCCATTCACAGCCTACCTT +
Preference number: 4 (lower is better)
Translates to: QREPRRQSEASQLSTATARNTNN*PFTAYL
Trigger: AAGGTAGGCTGTGAATGGTCAGTTATTTGTATTTCT...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCTCACTCTCCCAGGTGTaGCAACCAATAACCCCATTC +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTSLSQV*QPITPF
Trigger: GAATGGGGTTATTGGTTGTCACACCTGGGAGAGTGA...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCCCATTCTGGCAGGTGTaGGGCAACGTCTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALPFWQV*GNVSLC
Trigger: ACACAGTGAGACGTTGCCTCACACCTGCCAGAATGG...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGACAGCTTCCCAATTCTaGTCTGGTTCTGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVTASQF*SGSAWR
Trigger: CCGCCATGCAGAACCAGAGCAGAATTGGGAAGCTGT...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACATCTGGCAAGCCGATaGATATCGGTTGCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRHLASR*ISVAAR
Trigger: CCGGGCTGCAACCGATATGCATCGGCTTGCCAGATG...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACCACCGGGCCGGTCTTTaGCATTCCCAAGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHHRAGL*HSQVTD
Trigger: ATCAGTAACTTGGGAATGGCAAAGACCGGCCCGGTG...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGTGCCATCGCTGGTGGTaGAGGCCGACCCATTCACGT +
Preference number: 4 (lower is better)
Translates to: IGPHVPRGSEQLKINISECHRWW*RPTHSR
Trigger: ACGTGAATGGGTCGGCCTGCACCACCAGCGATGGCA...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGTATATGTGGTCTGTCTaGCATCGCTGGTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVYMWSV*HRWWCR
Trigger: CCTGCACCACCAGCGATGGCAGACAGACCACATATA...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAACCAGATTCCAGCTATTaGCTTCTGACACTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQPDSSY*LLTLSK
Trigger: CTTGCTTAGTGTCAGAAGGCAATAGCTGGAATCTGG...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTCCAGATTCCAGCTATTaGCTTCTGACACTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSPDSSY*LLTLSK
Trigger: CTTGCTTAGTGTCAGAAGGCAATAGCTGGAATCTGG...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCGCTTGGGGACTCATCTaGACCACACCCAGATTCCAG +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALAWGLI*TTPRFQ
Trigger: CTGGAATCTGGGTGTGGTGCAGATGAGTCCCCAAGC...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCGGTGGGCAGGCATACTaGGTTCGCCACTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALGGQAY*VRHSNK
Trigger: CTTGTTTGAGTGGCGAACGCAGTATGCCTGCCCACC...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACTGGTCCTTCTGCAAATaGTGGCCCTTTCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDWSFCK*WPFQSS
Trigger: GCTGCTCTGAAAGGGCCAGCATTTGCAGAAGGACCA...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTGTACAGGCTGAGGGATaGTGCAGGGCGGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIVQAEG*CRAVCF
Trigger: GAAGCAAACCGCCCTGCAGCATCCCTCAGCCTGTAC...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTGCAGGTCCCTGCATATaGCCCTCCTTACAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLAGPCI*PSLQRG
Trigger: CCCTCTCTGTAAGGAGGGGCATATGCAGGGACCTGC...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GTCACCTATGACACCCAGCTTCTGCGTGTGAACGAGTCCCAGGACCTGGACGTCCTGTGTACCCATCAGTaGTTTAACTTGTACAATGGA +
Preference number: 4 (lower is better)
Translates to: VTYDTQLLRVNESQDLDVLCTHQ*FNLYNG
Trigger: TCCATTGTACAAGTTAAAGCACTGATGGGTACACAG...GACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGGTGTCATAGGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCAGACAATCCATACCTATaGCAACGGGATTTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPDNPYL*QRDFLV
Trigger: AACTAGAAAATCCCGTTGGCATAGGTATGGATTGTC...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GCTGATCGTTGGGCTTCACCTGGCATATGTTGGCTCCAGAGCACGCCGGGTTTCGACAATCCATACCTATaGCAACGGGATTTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: ADRWASPGICWLQSTPGFDNPYL*QRDFLV
Trigger: AACTAGAAAATCCCGTTGGCATAGGTATGGATTGTC...GAAACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACCTGTTTGGGCCTCACTaGTCATCAACGGTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHLFGPH*SSTVWS
Trigger: AGACCACACCGTTGATGAGCAGTGAGGCCCAAACAG...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTAGAAGTTCTCAACACTaGTGCACTTTCCAGATCACC +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSRSSQH*CTFQIT
Trigger: GGTGATCTGGAAAGTGCACCAGTGTTGAGAACTTCT...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTCCGGGCAGGCATAGCTaGTGTACCACCGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLPGRHS*CTTGSC
Trigger: ACAACTTCCGGTGGTACACCAGCTATGCCTGCCCGG...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACACCCCTGAGTTGTCCATaGCATACCAGTTTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTPLSCP*HTSFLQ
Trigger: TTGGAGGAAACTGGTATGCCATGGACAACTCAGGGG...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGTCCTCGTGGTATATGTaGTCTGTCTGCCATCGCTGG +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVSSWYM*SVCHRW
Trigger: CCAGCGATGGCAGACAGACCACATATACCACGAGGA...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGACTTATAGAGCAAGCCTaGTCTGTATCCGTCGTTGTC +
Preference number: 4 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERLIEQA*SVSVVV
Trigger: GACAACGACGGATACAGACCAGGCTTGCTCTATAAG...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCTCCGACTGGCCTTGCTaGCTTCCAATTCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLSDWPC*LPILEL
Trigger: GAGCTCAAGAATTGGAAGCCAGCAAGGCCAGTCGGA...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGCCATTCGCCGCGGCTTaGGGACTCATCTGCACCACA +
Preference number: 4 (lower is better)
Translates to: IGPHVPRGSEQLKINISEPFAAA*GLICTT
Trigger: TGTGGTGCAGATGAGTCCCCAAGCCGCGGCGAATGG...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGATGAGGAGACCACCTTaGACTTGTCACTTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVMRRPP*TCHLWG
Trigger: GCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCAT...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCACCAGCTGCAGGACCTaGTCCACGTATCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTTSCRT*STYLSL
Trigger: GAGGCTGAGATACGTGGACCAGGTCCTGCAGCTGGT...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCTGGATTGAGTATTGGTaGTCCTGCTACCCGGCCGAT +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLWIEYW*SCYPAD
Trigger: ATCGGCCGGGTAGCAGGACCACCAATACTCAATCCA...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACGGACGTCACCAGTTGTaGTCCTTCTGCAAATGCTGG +
Preference number: 4 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHGRHQL*SFCKCW
Trigger: CCAGCATTTGCAGAAGGACCACAACTGGTGACGTCC...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCTTGAAGGTAGTACTTaGTCTTGTCAGAGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRLEGST*SCQRFQ
Trigger: TTGGAACCTCTGACAAGACCAAGTACTACCTTCAAG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTTCTCCTACAGCAAGTaGTCAGCTTACTTATCACTG +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPFSYSK*SAYLSL
Trigger: CAGTGATAAGTAAGCTGACCACTTGCTGTAGGAGAA...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTATTTGTAGGACACGTTaGAACTTCTCCTACAGCAAG +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISAICRTR*NFSYSK
Trigger: CTTGCTGTAGGAGAAGTTCCAACGTGTCCTACAAAT...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACGACTTGGTGGTAATATaGCCGTTCTCCTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHDLVVI*PFSCPS
Trigger: GGAAGGGCAGGAGAACGGCCATATTACCACCAAGTC...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACGACTTGGTGGTAATATaGCCGTTCTCCTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDDLVVI*PFSCPS
Trigger: GGAAGGGCAGGAGAACGGCCATATTACCACCAAGTC...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACACTTTCACCTCTGGGATaGTCAGAACCTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTLSPLG*SEPHPH
Trigger: GTGAGGATGAGGTTCTGACCATCCCAGAGGTGAAAG...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACGGAAGGACACCAGCTTaGTGGAGCTCACTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDGRTPA*WSSLSS
Trigger: AGAAGACAGTGAGCTCCACCAAGCTGGTGTCCTTCC...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAGAAGTCTTATTTGGTTaGAGGTGCTTGGCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTEVLFG*RCLAVP
Trigger: CGGGACAGCCAAGCACCTCCAACCAAATAAGACTTC...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTAGCAGGAGGTGGGAATaGCCTGGAGAACAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVSRRWE*PGEQPP
Trigger: AGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGCT...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGACACTGTGGATTTCCTTaGTGTGGGGTTTGCCTATTC +
Preference number: 4 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERHCGFP*CGVCLF
Trigger: GAATAGGCAAACCCCACACCAAGGAAATCCACAGTG...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTATTTCCACTTCACTGTaGATTTCCTTGGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSISTSL*ISLVWG
Trigger: ACCCCACACCAAGGAAATCCACAGTGAAGTGGAAAT...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTCTTTAATCACCAGGTaGCATCTTAGTCGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPSLITR*HLSRVK
Trigger: CTTCACACGACTAAGATGCCACCTGGTGATTAAAGA...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACGTCCCCAACTCAATGTaGCTATCTTGCCGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHVPNSM*LSCRLA
Trigger: TGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGAC...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCCCCACCATCACTTCTTaGTTGTCACCGAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALPTITS*LSPRPA
Trigger: TGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGG...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCACCCAGCATGCTCCGTaGGAGCCTCTGGAAAACAAC +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALTQHAP*EPLENN
Trigger: GTTGTTTTCCAGAGGCTCCCACGGAGCATGCTGGGT...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGTTTGATATACCTGTTTaGGCCTCACTGCTCATCAAC +
Preference number: 4 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRFDIPV*ASLLIN
Trigger: GTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTCATTCTCACCAAAGGTaGACAAGTGTTCGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLHSHQR*TSVRFS
Trigger: AGAAAAGCGAACACTTGTCCACCTTTGGTGAGAATG...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTTTCTTCTGCAAGACTTaGTATTCCACTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLFFCKT*YSTVCV
Trigger: CACACACACAGTGGAATACCAAGTCTTGCAGAAGAA...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGTTCTTCTGCAAGACTTaGTATTCCACTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQFFCKT*YSTVCV
Trigger: CACACACACAGTGGAATACCAAGTCTTGCAGAAGAA...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGTTCTTCTGCAAGACTTaGTATTCCACTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRFFCKT*YSTVCV
Trigger: CACACACACAGTGGAATACCAAGTCTTGCAGAAGAA...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACGACTTGCCTGCTTTGTaGTTAATTTTTGCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDDLPAL*LIFAKV
Trigger: AACTTTAGCAAAAATTAACCACAAAGCAGGCAAGTC...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000678224.1
CDS-3UTR TCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCCATCCGCTGAAACCCTaGGCTGCATTCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTHPLKP*AAFITS
Trigger: GGAGGTGATGAATGCAGCTCAGGGTTTCAGCGGATG...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTCATCCCATCATAATATaGAAGCTTCGCATTACTCAG +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISAHPIII*KLRITQ
Trigger: CTGAGTAATGCGAAGCTTTCATATTATGATGGGATG...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACACATCCCATCATAATATaGAAGCTTCGCATTACTCAG +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTHPIII*KLRITQ
Trigger: CTGAGTAATGCGAAGCTTTCATATTATGATGGGATG...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTCCACACACTCCCAGTTaGGAGAAAAGATGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIPHTPS*EKRWGG
Trigger: GCCACCCCATCTTTTCTCTCAACTGGGAGTGTGTGG...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCCCACACACTCCCAGTTaGGAGAAAAGATGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTPHTPS*EKRWGG
Trigger: GCCACCCCATCTTTTCTCTCAACTGGGAGTGTGTGG...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAGTATCCGTCGTTGTCTaGATGGGACAGGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRVSVVV*MGQAAS
Trigger: AGAGGCTGCCTGTCCCATTCAGACAACGACGGATAC...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGGGCTCTCGCTGCAGGTaGATCGGATGGTGGTTGACT +
Preference number: 4 (lower is better)
Translates to: IGPHVPRGSEQLKINISEGSRCR*IGWWLT
Trigger: AGTCAACCACCATCCGATTCACCTGCAGCGAGAGCC...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCCGATATCAAACCTCTTaGATGCAGGTCTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALRYQTS*MQVCPP
Trigger: CGGTGGGCAGACCTGCATTCAAGAGGTTTGATATCG...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACACTGTACGCCCAGGCTTaGAGATATCATGCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTLYAQA*RYHAKR
Trigger: CCTTTTTGCATGATATCTTCAAGCCTGGGCGTACAG...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGAAAATTCATTTTCTCTaGCACCTCAACTCCACTCAC +
Preference number: 4 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRKIHFL*HLNSTH
Trigger: GTGAGTGGAGTTGAGGTGTCAGAGAAAATGAATTTT...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTGACTCTGGAGAAAAATaGAAGTGCTGCCTCATAAAG +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSDSGEK*KCCLIK
Trigger: CTTTATGAGGCAGCACTTTCATTTTTCTCCAGAGTC...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGCTATATGTTCCTTCCTaGGGAATCATCTCGTGTTAC +
Preference number: 4 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLLYVPS*GIISCY
Trigger: GTAACACGAGATGATTCCTCAGGAAGGAACATATAG...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCAAGAAATACAAATAACTaGCCATTCACAGCCTACCTT +
Preference number: 4 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPRNTNN*PFTAYL
Trigger: AAGGTAGGCTGTGAATGGTCAGTTATTTGTATTTCT...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGGTGCACACATTCTGTTaGAGTTACAAATTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRVHTFC*SYKFRS
Trigger: ACTCCTGAATTTGTAACTGCAACAGAATGTGTGCAC...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCGTCTTTCTTGCAGGCTaGAGTGGTCCTCCACTCAAA +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLVFLAG*SGPPLK
Trigger: TTTGAGTGGAGGACCACTGCAGCCTGCAAGAAAGAC...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CATGAGGAGACCACCTTGGACTTGTCACTTGTGGGGCAGACGTCTGAGGAAAGCATTGTGGTATCTTCCTaGTGCTTTGACTTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: HEETTLDLSLVGQTSEESIVVSS*CFDLRG
Trigger: ACCTCTCAAGTCAAAGCAGCAGGAAGATACCACAAT...GCTTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR GCA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGAGCTGAAACCCTGAGCTaGATTCATCACCTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERAETLS*IHHLQN
Trigger: ATTTTGGAGGTGATGAATGCAGCTCAGGGTTTCAGC...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCACAGCTTCCCAATTCTaGTCTGGTTCTGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALTASQF*SGSAWR
Trigger: CCGCCATGCAGAACCAGAGCAGAATTGGGAAGCTGT...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCTGTAAGGGAGAGGATTaGAAACGCTCAAATAGAAAG +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTCKGED*KRSNRK
Trigger: CTTTCTATTTGAGCGTTTGCAATCCTCTCCCTTACA...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGAGCTTGGGGACTCATCTaGACCACACCCAGATTCCAG +
Preference number: 4 (lower is better)
Translates to: ILTLIISLITTSAMNKGRAWGLI*TTPRFQ
Trigger: CTGGAATCTGGGTGTGGTGCAGATGAGTCCCCAAGC...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAATTTCAGGACAATTATaGCATCTCTCCACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQISGQL*HLSTEV
Trigger: GACCTCAGTGGAGAGATGGCATAATTGTCCTGAAAT...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACACCTGGCAGTCATCATaGTCGTTGCTCTTCATGGGA +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDTWQSS*SLLFMG
Trigger: TCCCATGAAGAGCAACGAGCATGATGACTGCCAGGT...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACGAGTATTGGTGGTCCTaGTACCCGGCCGATATCTAT +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDEYWWS*YPADIY
Trigger: ATAGATATCGGCCGGGTAGCAGGACCACCAATACTC...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTAGGATGCCCCCTTGGTaGCTGAGAGCAGACAGACTC +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVRMPPW*LRADRL
Trigger: GAGTCTGTCTGCTCTCAGGCACCAAGGGGGCATCCT...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTGTTTCTGGACGAATTTaGACTCCAACTTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSVSGRI*TPTSLE
Trigger: CTCCAAAGAAGTTGGAGTGCAAATTCGTCCAGAAAC...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGATTATTTGGTTGGAGGTaGTTGGCTGTCCCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: ILTLIISLITTSAMNKGRLFGWR*LAVPRL
Trigger: GAGCCGCGGGACAGCCAAGCACCTCCAACCAAATAA...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTGCCCATGATTTTTCATaGAGTTTCTGTAAGTCACAC +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISAAHDFS*SFCKSH
Trigger: GTGTGACTTACAGAAACTGCATGAAAAATCATGGGC...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGTGCTGCAGGGCGGTTTaGTTCTCAGCAATAGAACAC +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVCCRAV*FSAIEH
Trigger: GTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCA...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTCTGTGTACCCATCAGTaGTTTAACTTGTACAATGGA +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLLCTHQ*FNLYNG
Trigger: TCCATTGTACAAGTTAAAGCACTGATGGGTACACAG...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTCACCTGCACCACGACTaGCCGTTGACCCCATTCTCA +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVHLHHD*PLTPFS
Trigger: TGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTG...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAGCTATCTTGCCGCCTTaGACACAAGCTCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRAILPP*TQAHLH
Trigger: GTGCAGGTGAGCTTGTGTGCAAGGCGGCAAGATAGC...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCTTCTGGGCTTGCTTCTaGCTTACCTATCCAACACCC +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLFWACF*LTYPTP
Trigger: GGGTGTTGGATAGGTAAGGCAGAAGCAAGCCCAGAA...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACTTGAACCTGACTTCCTaGTTCCTTCCAGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHLNLTS*FLPGLC
Trigger: ACAGAGCCCTGGAAGGAAGCAGGAAGTCAGGTTCAA...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTAGGATTTCCTTCTTCTaGAAGACTTGGTATTCCACT +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISARISFF*KTWYST
Trigger: AGTGGAATACCAAGTCTTGCAGAAGAAGGAAATCCT...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCCTTTCACCAACATCTaGTCACTTCCTGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVPFTNI*SLPAPS
Trigger: AGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCCCTTTCACCAACATCTaGTCACTTCCTGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLPFTNI*SLPAPS
Trigger: AGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGG...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACCTTGATGGCCCGCACTaGACAATATCCACACTTCCA +
Preference number: 4 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHLDGPH*TISTLP
Trigger: TGGAAGTGTGGATATTGTCCAGTGCGGGCCATCAAG...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACAAAGAAAACCCTGCCTaGGAGTCAAAGACCGTGCAG +
Preference number: 4 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHKENPA*ESKTVQ
Trigger: CTGCACGGTCTTTGACTCCCAGGCAGGGTTTTCTTT...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCAGATTTTGCCAGACTaGAGAGGTCGTACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVQILPD*RGRTAP
Trigger: TGGAGCAGTACGACCTCTCCAGTCTGGCAAAATCTG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATTCTGTCTGCCATCGCTaGTGGTGCAGGCCGACCCAT +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNSVCHR*WCRPTH
Trigger: ATGGGTCGGCCTGCACCACCAGCGATGGCAGACAGA...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACCTGGAGCAGACGAGATaGATCCTCGTGGTATATGTG +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDLEQTR*ILVVYV
Trigger: CACATATACCACGAGGATCCATCTCGTCTGCTCCAG...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGACCGTCGTTGTCTGAATaGGACAGGCAGCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ILTLIISLITTSAMNKGRPSLSE*DRQPLC
Trigger: ACACAGAGGCTGCCTGTCCCATTCAGACAACGACGG...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACACAAGTTGCCATGCCTTaGGTCTTTCACCTCACAGTT +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTQVAMP*VFHLTV
Trigger: AACTGTGAGGTGAAAGACCCAAGGCATGGCAACTTG...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATTACGAGACTCCGTTGTaGACGAGGGACCAGGACCCG +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNYETPL*TRDQDP
Trigger: CGGGTCCTGGTCCCTCGTCCACAACGGAGTCTCGTA...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTCTTGAAGGTAGTACTTaGTCTTGTCAGAGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSLEGST*SCQRFQ
Trigger: TTGGAACCTCTGACAAGACCAAGTACTACCTTCAAG...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TGCCTCACAGCCAGAAGCAGGTTTTCCCAGGATGGTCCCACAGACAGGCATTGTTTCTCCTACAGCAAGTaGTCAGCTTACTTATCACTG +
Preference number: 4 (lower is better)
Translates to: CLTARSRFSQDGPTDRHCFSYSK*SAYLSL
Trigger: CAGTGATAAGTAAGCTGACCACTTGCTGTAGGAGAA...ACAATGCCTGTCTGTGGGACCATCCTGGGAAAACCTGCTTCTGGCTGTGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR CCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGATCTGCTGTGCAGAGCTaGACTTCCCTTTCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRSAVQS*TSLSSP
Trigger: AGGCGAGGAAAGGGAAGTCCAGCTCTGCACAGCAGA...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTTCTGCTGTGCAGAGCTaGACTTCCCTTTCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLSAVQS*TSLSSP
Trigger: AGGCGAGGAAAGGGAAGTCCAGCTCTGCACAGCAGA...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTAGACAGGCAGGCAGATaGGTAACTCGCTCGGGAACG +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVRQAGR*VTRSGT
Trigger: CGTTCCCGAGCGAGTTACCCATCTGCCTGCCTGTCT...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGGCTTTATTGACTCACTaGACTCTAAACTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRALLTH*TLNSMF
Trigger: GAACATGGAGTTTAGAGTCCAGTGAGTCAATAAAGC...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTCCTCAGGAGAGGTATTaGAAAGTCCTTAAGAATAAC +
Preference number: 4 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPPQERY*KVLKNN
Trigger: GTTATTCTTAAGGACTTTCCAATACCTCTCCTGAGG...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTAGCTTACCAAGGGGATaGGCAGGTCCCTGCATATGC +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAISLPRG*AGPCIC
Trigger: GCATATGCAGGGACCTGCCCATCCCCTTGGTAAGCT...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGTTAGCAGGCAGCCAGTaGTGCAGACAACATGCCTTT +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVLAGSQ*CRQHAF
Trigger: AAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAA...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTTCTTTAATCACCAGGTaGCATCTTAGTCGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSSLITR*HLSRVK
Trigger: CTTCACACGACTAAGATGCCACCTGGTGATTAAAGA...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCACAGGCTCCAAGTTCTaGGCTTGCTTCTGCCTTACC +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALTGSKF*ACFCLT
Trigger: GGTAAGGCAGAAGCAAGCCCAGAACTTGGAGCCTGT...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTCCCACCATCACTTCTTaGTTGTCACCGAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIPTITS*LSPRPA
Trigger: TGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGG...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAACCCAGCATGCTCCGTaGGAGCCTCTGGAAAACAAC +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRTQHAP*EPLENN
Trigger: GTTGTTTTCCAGAGGCTCCCACGGAGCATGCTGGGT...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGGCACTTTTTGCCACCTaGCAGGCTCCTGAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: IGPHVPRGSEQLKINISEALFAT*QAPESG
Trigger: GCCAGACTCAGGAGCCTGCCAGGTGGCAAAAAGTGC...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CAA 72 bp TTCTCAATTCCGACTGGCCTTGCTGGCTTCCAATTCTaGAGCTCTTCAGTTTGGGTTTCTGCCTCACAGCCA +
Preference number: 4 (lower is better)
Translates to: FSIPTGLAGFQF*SSSVWVSASQP
Trigger: TGGCTGTGAGGCAGAAACCCAAACTGAAGAGCTCAAGAATTGGAAGCCAGCAAGGCCAGTCGGAATTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CAA 72 bp AACGTGATCCTGGTGGAGAAGCGCTGGTTCCCACACTaGTCACCGTTGACATACATGATGCTCAAAGATCCA +
Preference number: 4 (lower is better)
Translates to: NVILVEKRWFPH*SPLTYMMLKDP
Trigger: TGGATCTTTGAGCATCATGTATGTCAACGGTGACAAGTGTGGGAACCAGCGCTTCTCCACCAGGATCACGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CAA 72 bp TCACTGTACCTTGACAGGGACGAGAGGTCGAAGGAGTaGCCAGCCCCATCTTTGAATGAACATTCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: SLYLDRDERSKE*PAPSLNEHSVR
Trigger: TCTGACTGAATGTTCATTCAAAGATGGGGCTGGCAACTCCTTCGACCTCTCGTCCCTGTCAAGGTACAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR TCA 90 bp GTGGAAGAAGATGGTGGAAGAAACAGACTTGGTCTTATCCTTTCCGCACTTAGAGTCACCGCAGGGCTGTaGCCATCACAAAAGTCTAGC +
Preference number: 4 (lower is better)
Translates to: VEEDGGRNRLGLILSALRVTAGL*PSQKSS
Trigger: GCTAGACTTTTGTGATGGTCACAGCCCTGCGGTGAC...TCTAAGTGCGGAAAGGATAAGACCAAGTCTGTTTCTTCCACCATCTTCTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGGAATATCGGAGGGTCTaGTTGTGGTATCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVEYRRV*LWYLPA
Trigger: AGCAGGAAGATACCACAATCAGACCCTCCGATATTC...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTCATCCGCTGAAACCCTaGGCTGCATTCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVHPLKP*AAFITS
Trigger: GGAGGTGATGAATGCAGCTCAGGGTTTCAGCGGATG...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGTTAATTTTCTTGCCATaGCCACAATCATCACCATCT +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRLIFLP*PQSSPS
Trigger: AGATGGTGATGATTGTGGTCATGGCAAGAAAATTAA...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACACACCATTTTTCTTTGTaGGAGGTGATAAGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTHHFSL*EVISQK
Trigger: CTTTTGACTTATCACCTCTCACAAAGAAAAATGGTG...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTCGTGACATGTTCCCCTaGGTTGTCCATGGCATACCA +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIRDMFP*VVHGIP
Trigger: TGGTATGCCATGGACAACTCAGGGGAACATGTCACG...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACAGTATTTCCTCCACGTaGCATGTTCCCCTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHSISST*HVPLSC
Trigger: ACAACTCAGGGGAACATGTCACGTGGAGGAAATACT...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCGGTGAGCCCGATATCTaGGCACACTCAAACGTGATC +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTGEPDI*AHSNVI
Trigger: GATCACGTTTGAGTGTGCTCAGATATCGGGCTCACC...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTGGTTCCCGCTTTTCCTaGCATGAGGAGACCACCTTG +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVGSRFS*HEETTL
Trigger: CAAGGTGGTCTCCTCATGTCAGGAAAAGCGGGAACC...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCGTAATCCAGTTTCATTaGTTGCAGCCGTCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTVIQFH*LQPSKG
Trigger: TCCTTTGGACGGCTGCAATCAATGAAACTGGATTAC...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGAAATTCATAACCCCAGCTTCTGCGTGTaGACGAGTCCCAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: EMLSSDTYRSIHCQEIHNPSFCV*TSPRTW
Trigger: CCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGG...GTTATGAATTTCTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR TCA 90 bp AGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGAAATTCATACCATCTGCACCTCCTaGGGCTTCACGGCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SEMLSSDTYRSIHCQEIHTICTS*GFTAQA
Trigger: TGCCTGCGCCGTGAAGCCTCAGGAGGTGCAGATGGT...ATGAATTTCTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR TCA 90 bp TTGCCTACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGTTCCGACTGAAGTGCTaGTCGTTGGGCTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: LPTVKCLVLTRIAQSTVKFRLKC*SLGFTW
Trigger: CCAGGTGAAGCCCAACGATCAGCACTTCAGTCGGAA...CTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR TCA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTTTCCTTATTCACCTTTaGGTATTTGTAGGACACGTT +
Preference number: 4 (lower is better)
Translates to: APCDPIANRGKTCVPISAFLIHL*VFVGHV
Trigger: AACGTGTCCTACAAATACTCAAAGGTGAATAAGGAA...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GTGGAAGAAGATGGTGGAAGAAACAGACTTGGTCTTATCCTTTCCGCACTTAGAGCCCTGTGGCCGATCTaGGCCATGCCTTATTCCAAT +
Preference number: 4 (lower is better)
Translates to: VEEDGGRNRLGLILSALRALWPI*AMPYSN
Trigger: ATTGGAATAAGGCATGGCTCAGATCGGCCACAGGGC...TCTAAGTGCGGAAAGGATAAGACCAAGTCTGTTTCTTCCACCATCTTCTTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCCGAGGCTCTGGCCCATaGTTTTTCATGCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALRGSGP*FFMQFL
Trigger: CAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCG...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCCAAACCGGTACAGGCTaGGGGATGCTGCAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIQTGTG*GMLQGG
Trigger: ACCGCCCTGCAGCATCCCTCAGCCTGTACCGGTTTG...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCAAAATACACTCATGTTaGAATCAAACAAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTKIHSC*NQTSQP
Trigger: TGGCTGGCTTGTTTGATTTCAACATGAGTGTATTTT...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCATGAGTGTACCTCCCTaGGCCATGGGATTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALMSVPP*AMGFFR
Trigger: TCTGAAGAATCCCATGGCTCAGGGAGGTACACTCAT...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGTCAAACTCCTTACTGTaGCAGTCACAACAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVSNSLL*QSQQAP
Trigger: TGGAGCCTGTTGTGACTGTCACAGTAAGGAGTTTGA...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTCTGAGTGGCACCAGATaGCCTCACCTGGGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: ITTSAMNKGRQVNNRASILSGTR*PHLGCE
Trigger: CTCACAACCCAGGTGAGGTCATCTGGTGCCACTCAG...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACTTCATGTTGCATAGCTaGACCTCTGCACCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDFMLHS*TSAPFH
Trigger: GTGAAAGGGTGCAGAGGTTCAGCTATGCAACATGAA...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCTTCATGTTGCATAGCTaGACCTCTGCACCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLFMLHS*TSAPFH
Trigger: GTGAAAGGGTGCAGAGGTTCAGCTATGCAACATGAA...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGATCTATGGAGACATCCTaGTGCTCGCCGCTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRSMETS*CSPLRE
Trigger: TTCTCTGAGCGGCGAGCAGCAGGATGTCTCCATAGA...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCTCTATGGAGACATCCTaGTGCTCGCCGCTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTSMETS*CSPLRE
Trigger: TTCTCTGAGCGGCGAGCAGCAGGATGTCTCCATAGA...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTTTTCCCATCGTTACCTaGGGTTTTATTGCACTCAAA +
Preference number: 4 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSFPIVT*GFIALK
Trigger: TTTGAGTGCAATAAAACCGCAGGTAACGATGGGAAA...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGACACCGGGCCGGTCTTTaGCATTCCCAAGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: ILTLIISLITTSAMNKGRHRAGL*HSQVTD
Trigger: ATCAGTAACTTGGGAATGGCAAAGACCGGCCCGGTG...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CATGAGGAGACCACCTTGGACTTGTCACTTGTGGGGCAGACGTCTGAGGAAAGCTGTAAGGGAGAGGATTaGAAACGCTCAAATAGAAAG +
Preference number: 4 (lower is better)
Translates to: HEETTLDLSLVGQTSEESCKGED*KRSNRK
Trigger: CTTTCTATTTGAGCGTTTGCAATCCTCTCCCTTACA...GCTTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR GCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCAGTCATCATGCTCGTTaGTCTTCATGGGACAGGCTG +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALSHHAR*SSWDRL
Trigger: CAGCCTGTCCCATGAAGAGCAACGAGCATGATGACT...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTTCCTTGTACACCAGCTaGAGGACCTGGTCCACGTAT +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAISLYTS*RTWSTY
Trigger: ATACGTGGACCAGGTCCTGCAGCTGGTGTACAAGGA...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCAGCTGTTTGAGTGTCTaGAGAAGCCCCACTCGTGGT +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTSCLSV*RSPTRG
Trigger: ACCACGAGTGGGGCTTCTGCAGACACTCAAACAGCT...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GTGGAAGAAGATGGTGGAAGAAACAGACTTGGTCTTATCCTTTCCGCACTTAGAATATGGCCGTTCTCCTaGCCTTCCTTTCCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: VEEDGGRNRLGLILSALRIWPFS*PSFPCR
Trigger: ACGGCAGGGAAAGGAAGGGCAGGAGAACGGCCATAT...TCTAAGTGCGGAAAGGATAAGACCAAGTCTGTTTCTTCCACCATCTTCTTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCGGCCGATCTGAGCCATaGCTTATTCCAATGACTGTA +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLGRSEP*LIPMTV
Trigger: TACAGTCATTGGAATAAGGCATGGCTCAGATCGGCC...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACCCCTCTGTTTTGAGATaGGTCCGGCCTTATGCTTTT +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDPSVLR*VRPYAF
Trigger: AAAAGCATAAGGCCGGACGCATCTCAAAACAGAGGG...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTGGATGGGCAGGTCCCTaGATATGCCCCTCCTTACAG +
Preference number: 4 (lower is better)
Translates to: ITTSAMNKGRQVNNRASIGWAGP*ICPSLQ
Trigger: CTGTAAGGAGGGGCATATGCAGGGACCTGCCCATCC...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTCTGTTTGGGCCTCACTaGTCATCAACGGTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAILFGPH*SSTVWS
Trigger: AGACCACACCGTTGATGAGCAGTGAGGCCCAAACAG...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCTTCCCAATTCTGCTCTaGTTCTGCATGGCGGACCAG +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTFPILL*FCMADQ
Trigger: CTGGTCCGCCATGCAGAACCAGAGCAGAATTGGGAA...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGATCCTCGTGGTATATGTaGTCTGTCTGCCATCGCTGG +
Preference number: 4 (lower is better)
Translates to: ILTLIISLITTSAMNKGRSSWYM*SVCHRW
Trigger: CCAGCGATGGCAGACAGACCACATATACCACGAGGA...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCAAGTTGCCATGCCTTaGGTCTTTCACCTCACAGTT +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVQVAMP*VFHLTV
Trigger: AACTGTGAGGTGAAAGACCCAAGGCATGGCAACTTG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCATGAGGAGACCACCTTaGACTTGTCACTTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTMRRPP*TCHLWG
Trigger: GCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCAT...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTGGCCTGGAGTTCACTTaGCTCTCGCTGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVGLEFT*LSLQVN
Trigger: ATTCACCTGCAGCGAGAGCCAAGTGAACTCCAGGCC...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATAGCTCAGGCCGGATTTaGAGGGACAAGGGGACCCAT +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNSSGRI*RDKGTH
Trigger: ATGGGTCCCCTTGTCCCTCCAAATCCGGCCTGAGCT...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGAATCTCATTTGCTATTaGATTGAGTATTGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRNLICY*IEYWWS
Trigger: GGACCACCAATACTCAATCCAATAGCAAATGAGATT...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTAATCTCATTTGCTATTaGATTGAGTATTGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLNLICY*IEYWWS
Trigger: GGACCACCAATACTCAATCCAATAGCAAATGAGATT...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGACAGCCTCCTTGTTCTaGCCCGACTGCAAAGGTGCA +
Preference number: 4 (lower is better)
Translates to: IGPHVPRGSEQLKINISETASLF*PDCKGA
Trigger: TGCACCTTTGCAGTCGGGCCAGAACAAGGAGGCTGT...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCTACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGAAAACGAGTCCCAGGACCTaGACGTCACCAGTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: PTVKCLVLTRIAQSTVKKTSPRT*TSPVVV
Trigger: GACCACAACTGGTGACGTCCAGGTCCTGGGACTCGT...TTTCTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR CCA 90 bp CCTACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGAAATCACCTGGCATATGTTaGCTCCAGAGCACGCCGGGT +
Preference number: 4 (lower is better)
Translates to: PTVKCLVLTRIAQSTVKKSPGIC*LQSTPG
Trigger: ACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGA...TTTCTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR CCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTTCATCCTCACTGTCCTaGTCATCCCCATGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVSSSLS*SSPCRE
Trigger: CTCCCTGCATGGGGATGACCAGGACAGTGAGGATGA...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACTCAAGATGGACAAACTaGTACATCACACCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDSRWTN*YITPLL
Trigger: CAGCAGGGGTGTGATGTACCAGTTTGTCCATCTTGA...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATTGGAGAACAGCCCCCTaGGTAGAATGCCTGAGGACC +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNWRTAP*VECLRT
Trigger: GGTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCA...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCTTAGCAGGCAGCCAGTaGTGCAGACAACATGCCTTT +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALLAGSQ*CRQHAF
Trigger: AAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAA...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCATTTCCACTTCACTGTaGATTTCCTTGGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTISTSL*ISLVWG
Trigger: ACCCCACACCAAGGAAATCCACAGTGAAGTGGAAAT...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACTACCTCCCTGAGCCATaGGATTCTTCAGAGTCAGTA +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDYLPEP*DSSESV
Trigger: TACTGACTCTGAAGAATCCCATGGCTCAGGGAGGTA...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCAAAATTAGCCGGGCGTaGCAGTGCGTGCCTTTAATC +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALKISRA*QCVPLI
Trigger: GATTAAAGGCACGCACTGCCACGCCCGGCTAATTTT...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATTGGGATGGGGCTGAGTaGCACCAGATGACCTCACCT +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNWDGAE*HQMTSP
Trigger: AGGTGAGGTCATCTGGTGCCACTCAGCCCCATCCCA...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCTGCTCATCAACGGTGTaGTCTCATACAGACCACCCA +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALCSSTV*SHTDHP
Trigger: TGGGTGGTCTGTATGAGACCACACCGTTGATGAGCA...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTGTCACCGCAGGGCTGTaGCCATCACAAAAGTCTAGC +
Preference number: 4 (lower is better)
Translates to: ITTSAMNKGRQVNNRASIVTAGL*PSQKSS
Trigger: GCTAGACTTTTGTGATGGTCACAGCCCTGCGGTGAC...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTCACCATTTTTCTTTGTaGGAGGTGATAAGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPHHFSL*EVISQK
Trigger: CTTTTGACTTATCACCTCTCACAAAGAAAAATGGTG...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGACCAGAGTCGATATCTTaGTGCAGGAATTTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ILTLIISLITTSAMNKGRPESIS*CRNLRG
Trigger: GCCCCTCAAATTCCTGCATCAAGATATCGACTCTGG...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCGTGGCTGACAAATATTaGTGTAGAAATCAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTVADKY*CRNQGW
Trigger: CCAACCCTGATTTCTACATCAATATTTGTCAGCCAC...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCTGCCTGGCTCCGTTCTaGCAGCCCCTTGTGCATCTG +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMICLAPF*QPLVHL
Trigger: CAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCA...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTGCTCCCCTGCCCGAGTaGACTTTCACCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCAPLPE*TFTSGM
Trigger: CATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGC...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCCGAGGCTCTGGCCCATaGTTTTTCATGCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTRGSGP*FFMQFL
Trigger: CAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCG...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCAACAATGTCCAGAACTaGCAGCAAGTATGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLNNVQN*QQVWLK
Trigger: CTTGAGCCATACTTGCTGTCAGTTCTGGACATTGTT...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCTCAAACTCCTTACTGTaGCAGTCACAACAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALSNSLL*QSQQAP
Trigger: TGGAGCCTGTTGTGACTGTCACAGTAAGGAGTTTGA...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAAAGGAAAGAAAGACCTaGCTTCCTCCCAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRKERKT*LPPRES
Trigger: GCTCTCTCTGGGAGGAAGTCAGGTCTTTCTTTCCTT...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CATGAGGAGACCACCTTGGACTTGTCACTTGTGGGGCAGACGTCTGAGGAAAGCAGAAATACAAATAACTaGCCATTCACAGCCTACCTT +
Preference number: 4 (lower is better)
Translates to: HEETTLDLSLVGQTSEESRNTNN*PFTAYL
Trigger: AAGGTAGGCTGTGAATGGTCAGTTATTTGTATTTCT...GCTTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR TCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTTCACTCTCCCAGGTGTaGCAACCAATAACCCCATTC +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAISLSQV*QPITPF
Trigger: GAATGGGGTTATTGGTTGTCACACCTGGGAGAGTGA...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGACACACAGGAAGGCAATaGTGCTCTGGACTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: ILTLIISLITTSAMNKGRHTGRQ*CSGLCD
Trigger: ATCACAGAGTCCAGAGCAGCATTGCCTTCCTGTGTG...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCCTGTTTCCGTCTGACTaGCATCCACAGCTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTLFPSD*HPQLPN
Trigger: ATTGGGAAGCTGTGGATGGCAGTCAGACGGAAACAG...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATCCGATGCATATCGGTTaGAGCCCGGCACTGGATTCA +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNPMHIG*SPALDS
Trigger: TGAATCCAGTGCCGGGCTGCAACCGATATGCATCGG...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GTGGAAGAAGATGGTGGAAGAAACAGACTTGGTCTTATCCTTTCCGCACTTAGATCCTTGTACACCAGCTaGAGGACCTGGTCCACGTAT +
Preference number: 4 (lower is better)
Translates to: VEEDGGRNRLGLILSALRSLYTS*RTWSTY
Trigger: ATACGTGGACCAGGTCCTGCAGCTGGTGTACAAGGA...TCTAAGTGCGGAAAGGATAAGACCAAGTCTGTTTCTTCCACCATCTTCTTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACAGTTGTGGTCCTTCTaGAAATGCTGGCCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRQLWSF*KCWPFQ
Trigger: CTGAAAGGGCCAGCATTTGCAGAAGGACCACAACTG...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCTGCCCCAGCTCCCCTaGCCGAGTGAACTTTCACCT +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCLPQLP*PSELSP
Trigger: AGGTGAAAGTTCACTCGGGCAGGGGAGCTGGGGCAG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTAAGGGCATTGCTCTGTaGGTTTCTCACTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVKGIAL*VSHWVG
Trigger: TCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTT...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACACTGTCTTCTGCTGTaGAGAGCTGGACTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRHCLLL*RAGLPF
Trigger: AAAGGGAAGTCCAGCTCTGCACAGCAGAAGACAGTG...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp AAACTCAAAGTAAGTGTTTCGGATCCCTTGCCCAGAGTCGATATCTTGATGCAGGCAGGCAGCCAGTGGTaGAGACAACATGCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: KLKVSVSDPLPRVDILMQAGSQW*RQHAFL
Trigger: CAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGC...CTGCATCAAGATATCGACTCTGGGCAAGGGATCCGAAACACTTACTTTGAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR GCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGATCAATGTGGCTATCTTaGCGCCTTGCACACAAGCTC +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRSMWLS*RLAHKL
Trigger: GAGCTTGTGTGCAAGGCGGCAAGATAGCCACATTGA...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGATTGAACCTGACTTCCTaGTTCCTTCCAGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRLNLTS*FLPGLC
Trigger: ACAGAGCCCTGGAAGGAAGCAGGAAGTCAGGTTCAA...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTATGTCTAGGAATTGCTaGCTACCTGGAGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVMSRNC*LPGGLL
Trigger: CAGCAGGCCTCCAGGTAGGCAGCAATTCCTAGACAT...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GTGGAAGAAGATGGTGGAAGAAACAGACTTGGTCTTATCCTTTCCGCACTTAGACTGTTTGGGCCTCACTaGTCATCAACGGTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: VEEDGGRNRLGLILSALRLFGPH*SSTVWS
Trigger: AGACCACACCGTTGATGAGCAGTGAGGCCCAAACAG...TCTAAGTGCGGAAAGGATAAGACCAAGTCTGTTTCTTCCACCATCTTCTTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCGGGTTGGTCTTGCTGTaGCAAGGGTGCCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIGLVLL*QGCQRW
Trigger: CCACCTCTGGCACCCTTGGCACAGCAAGACCAACCC...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCATGTCTATTAAATCTTaGTTTTCACTGTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: PVWASLLINGVVSYRPPTMSIKS*FSLCCL
Trigger: GAGACAGCACAGTGAAAAGCAAGATTTAATAGACAT...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678224.1
CDS-3UTR CCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTTTCCCAATTCTGCTCTaGTTCTGCATGGCGGACCAG +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVFPILL*FCMADQ
Trigger: CTGGTCCGCCATGCAGAACCAGAGCAGAATTGGGAA...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAACTTTCCAGATCACCTaGCTTGCATACAAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTTFQIT*LAYKCD
Trigger: ATCACACTTGTATGCAAGCCAGGTGATCTGGAAAGT...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATCCGTCGTTGTCTGAATaGGACAGGCAGCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNPSLSE*DRQPLC
Trigger: ACACAGAGGCTGCCTGTCCCATTCAGACAACGACGG...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCTTTCTCAATTCCGACTaGCCTTGCTGGCTTCCAATT +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLFLNSD*PCWLPI
Trigger: AATTGGAAGCCAGCAAGGCCAGTCGGAATTGAGAAA...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTGACTTGGCAGTCCACTaGAGAAGGAACACAGGCCAA +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVDLAVH*RRNTGQ
Trigger: TTGGCCTGTGTTCCTTCTCCAGTGGACTGCCAAGTC...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGATGGACTTGTCACTTGTaGGGCAGACGTCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRWTCHL*GRRLRK
Trigger: TTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCA...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGATGGACTTGTCACTTGTaGGGCAGACGTCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: ILTLIISLITTSAMNKGRWTCHL*GRRLRK
Trigger: TTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCA...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATGGCCTGGAGTTCACTTaGCTCTCGCTGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNGLEFT*LSLQVN
Trigger: ATTCACCTGCAGCGAGAGCCAAGTGAACTCCAGGCC...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGATATTGGATTGAGTATTaGTGGTCCTGCTACCCGGCC +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRYWIEY*WSCYPA
Trigger: GGCCGGGTAGCAGGACCACCAATACTCAATCCAATA...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCTACGAGACTCCGTTGTaGACGAGGGACCAGGACCCG +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIYETPL*TRDQDP
Trigger: CGGGTCCTGGTCCCTCGTCCACAACGGAGTCTCGTA...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAAGTGGAAGAAGATGGTaGAAGAAACAGACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTSGRRW*KKQTWS
Trigger: AGACCAAGTCTGTTTCTTCCACCATCTTCTTCCACT...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGACCACACCCCGAGGTTaGCCTGGAGAAGGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: IGPHVPRGSEQLKINISETTPRG*PGEGKE
Trigger: TTCTTTACCTTCTCCAGGCCAACCTCGGGGTGTGGT...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGTGGATTTCCTTGGTGTaGGGTTTGCCTATTCCATCT +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVWISLV*GLPIPS
Trigger: AGATGGAATAGGCAAACCCCACACCAAGGAAATCCA...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACTCAAAAGCCCAATCTaGCCCTCCTACAGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRLKSPI*PSYSSQ
Trigger: TTGAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAG...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCCATGTGTCAAGGTCATaGAGGTTACAGAAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTHVSRS*RLQKGE
Trigger: TTCTCCTTTCTGTAACCTCCATGACCTTGACACATG...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTTGCTCATCAACGGTGTaGTCTCATACAGACCACCCA +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAICSSTV*SHTDHP
Trigger: TGGGTGGTCTGTATGAGACCACACCGTTGATGAGCA...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTAGCTCACTGTTGTGTTaGATTCCAGGAGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAISSLLC*IPGEIW
Trigger: CCAGATCTCTCCTGGAATTCAACACAACAGTGAGCT...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTTGCACTCAAAGTTTATaGCGCTCATCCGCTGAAACC +
Preference number: 4 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLCTQSL*RSSAET
Trigger: GGTTTCAGCGGATGAGCGTCATAAACTTTGAGTGCA...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTGGCTCTCGCTGCAGGTaGATCGGATGGTGGTTGACT +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCGSRCR*IGWWLT
Trigger: AGTCAACCACCATCCGATTCACCTGCAGCGAGAGCC...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACCATTTGCTATTGGATTaGGTATTGGTGGTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDHLLLD*VLVVLL
Trigger: TAGCAGGACCACCAATACTCAATCCAATAGCAAATG...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CACAATTTGCCTACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTCGATATCAAACCTCTTaGATGCAGGTCTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: HNLPTVKCLVLTRIAQSTRYQTS*MQVCPP
Trigger: CGGTGGGCAGACCTGCATTCAAGAGGTTTGATATCG...AGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTAGGCAAATTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR TCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCCCCGGGAGTCCCAGCTaGAGTAGTAAGTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIPGSPS*SSKCSC
Trigger: ACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGG...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGAAATTCATAACCCCGGGAGTCCCAGCTaGAGTAGTAAGTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: EMLSSDTYRSIHCQEIHNPGSPS*SSKCSC
Trigger: ACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGG...GTTATGAATTTCTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR TCA 90 bp TTGCCTACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGTTCCAACTTTCCGACTaGAGTGCTGATCGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LPTVKCLVLTRIAQSTVKFQLSD*SADRWA
Trigger: AGCCCAACGATCAGCACTTCAGTCGGAAAGTTGGAA...CTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR TCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGGCTCCCCTGCCCGAGTaGACTTTCACCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: KGMENRMLSLRSLFITLEAPLPE*TFTSGM
Trigger: CATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGC...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTTTTGGGCAGGTTGTTTaGATTCACCAGCCGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIFGQVV*IHQPAK
Trigger: TTTTGCCGGCTGGTGAATTCAAACAACCTGCCCAAA...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAAAAATTCATTTTCTCTaGCACCTCAACTCCACTCAC +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTKIHFL*HLNSTH
Trigger: GTGAGTGGAGTTGAGGTGTCAGAGAAAATGAATTTT...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGGACTCTGGAGAAAAATaGAAGTGCTGCCTCATAAAG +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVDSGEK*KCCLIK
Trigger: CTTTATGAGGCAGCACTTTCATTTTTCTCCAGAGTC...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCTGTAGGAATGCCTGGTaGTGGGAAGAAACTTCATCT +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALCRNAW*WEETSS
Trigger: AGATGAAGTTTCTTCCCATCACCAGGCATTCCTACA...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATCATACAACCTCCTGGTaGCACACACACTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNHTTSW*HTHWLL
Trigger: AAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTATG...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GTGGAAGAAGATGGTGGAAGAAACAGACTTGGTCTTATCCTTTCCGCACTTAGACTCCCATCTGGTTGCTaGAGCGTCTCCATCTCTTTA +
Preference number: 4 (lower is better)
Translates to: VEEDGGRNRLGLILSALRLPSGC*SVSISL
Trigger: TAAAGAGATGGAGACGCTTCAGCAACCAGATGGGAG...TCTAAGTGCGGAAAGGATAAGACCAAGTCTGTTTCTTCCACCATCTTCTTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCGGCCATTTTCTATTGTaGTTTCACGTGTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALGHFLL*FHVWSA
Trigger: TGCTGACCACACGTGAAATCACAATAGAAAATGGCC...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTGGACTCTGTGATTTGTaGCTTGCTGGTCACAGCTCA +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVGLCDL*LAGHSS
Trigger: TGAGCTGTGACCAGCAAGGCACAAATCACAGAGTCC...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAACAGGAAGGCAATGCTaGTCTGGACTCTGTGATTTG +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRTGRQC*SGLCDL
Trigger: CAAATCACAGAGTCCAGAGCAGCATTGCCTTCCTGT...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAGTGCACACATTCTGTTaGAGTTACAAATTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTVHTFC*SYKFRS
Trigger: ACTCCTGAATTTGTAACTGCAACAGAATGTGTGCAC...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACATTGTGGTATCTTCCTaGTGCTTTGACTTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDIVVSS*CFDLRG
Trigger: ACCTCTCAAGTCAAAGCAGCAGGAAGATACCACAAT...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GTGGAAGAAGATGGTGGAAGAAACAGACTTGGTCTTATCCTTTCCGCACTTAGACTGTTTCCGTCTGACTaGCATCCACAGCTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: VEEDGGRNRLGLILSALRLFPSD*HPQLPN
Trigger: ATTGGGAAGCTGTGGATGGCAGTCAGACGGAAACAG...TCTAAGTGCGGAAAGGATAAGACCAAGTCTGTTTCTTCCACCATCTTCTTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp AAACTCAAAGTAAGTGTTTCGGATCCCTTGCCCAGAGTCGATATCTTGATGCAGTCCATTTTTATCCACTaGACACACTGCCGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: KLKVSVSDPLPRVDILMQSIFIH*THCRVL
Trigger: GAGGACGCGGCAGTGTGTGCAGTGGATAAAAATGGA...CTGCATCAAGATATCGACTCTGGGCAAGGGATCCGAAACACTTACTTTGAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR GCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAAGTTCTCAACACTGGTaGACTTTCCAGATCACCTGG +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRSSQHW*TFQITW
Trigger: CCAGGTGATCTGGAAAGTGCACCAGTGTTGAGAACT...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATTATATGTGGTCTGTCTaGCATCGCTGGTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNYMWSV*HRWWCR
Trigger: CCTGCACCACCAGCGATGGCAGACAGACCACATATA...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGGGTGGCTGTTCAGCCTaGCCCTGGAGCAGACGAGAT +
Preference number: 4 (lower is better)
Translates to: KGMENRMLSLRSLFITLEGGCSA*PWSRRD
Trigger: ATCTCGTCTGCTCCAGGGGCAGGCTGAACAGCCACC...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTAAGACCCCACTGCGCTaGCCTGGCATCCAGGAATGT +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCKTPLR*PGIQEC
Trigger: ACATTCCTGGATGCCAGGGCAGCGCAGTGGGGTCTT...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTGCTCCTGAAGGGCATTaGTCTGTGCGTTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: ITTSAMNKGRQVNNRASIAPEGH*SVRFSL
Trigger: CAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTGGCCGATCTGAGCCATaGCTTATTCCAATGACTGTA +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIGRSEP*LIPMTV
Trigger: TACAGTCATTGGAATAAGGCATGGCTCAGATCGGCC...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCCTCTGTTTTGAGATaGGTCCGGCCTTATGCTTTT +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRPSVLR*VRPYAF
Trigger: AAAAGCATAAGGCCGGACGCATCTCAAAACAGAGGG...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CATGAGGAGACCACCTTGGACTTGTCACTTGTGGGGCAGACGTCTGAGGAAAGCGTAAGTCACACACTGTaGAAATTAAGGCTTCTTATA +
Preference number: 4 (lower is better)
Translates to: HEETTLDLSLVGQTSEESVSHTL*KLRLLI
Trigger: TATAAGAAGCCTTAATTTGCACAGTGTGTGACTTAC...GCTTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR GCA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCGCCCATGATTTTTCATaGAGTTTCTGTAAGTCACAC +
Preference number: 4 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTAHDFS*SFCKSH
Trigger: GTGTGACTTACAGAAACTGCATGAAAAATCATGGGC...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCACCTGCACCACGACTaGCCGTTGACCCCATTCTCA +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCHLHHD*PLTPFS
Trigger: TGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTTTCTGGGCTTGCTTCTaGCTTACCTATCCAACACCC +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVFWACF*LTYPTP
Trigger: GGGTGTTGGATAGGTAAGGCAGAAGCAAGCCCAGAA...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACTCATCTAGACTATCTTaGTCAAAAGCCCAATCTGGC +
Preference number: 4 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDSSRLS*SKAQSG
Trigger: GCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGA...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCTCATCTAGACTATCTTaGTCAAAAGCCCAATCTGGC +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLSSRLS*SKAQSG
Trigger: GCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGA...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTAGTCCGTCCCGGGGCTaGCCAACATCAAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCSPSRG*PTSNAW
Trigger: CCAGGCGTTTGATGTTGGCCAGCCCCGGGACGGACT...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GTGGAAGAAGATGGTGGAAGAAACAGACTTGGTCTTATCCTTTCCGCACTTAGACTGGAGCAGACGAGATaGATCCTCGTGGTATATGTG +
Preference number: 4 (lower is better)
Translates to: VEEDGGRNRLGLILSALRLEQTR*ILVVYV
Trigger: CACATATACCACGAGGATCCATCTCGTCTGCTCCAG...TCTAAGTGCGGAAAGGATAAGACCAAGTCTGTTTCTTCCACCATCTTCTTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATTGGATTGAGTATTGGTaGTCCTGCTACCCGGCCGAT +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNWIEYW*SCYPAD
Trigger: ATCGGCCGGGTAGCAGGACCACCAATACTCAATCCA...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATGGACGTCACCAGTTGTaGTCCTTCTGCAAATGCTGG +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNGRHQL*SFCKCW
Trigger: CCAGCATTTGCAGAAGGACCACAACTGGTGACGTCC...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CACAATTTGCCTACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTTCGTTGGGCTTCACCTaGCATATGTTGGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: HNLPTVKCLVLTRIAQSTSLGFT*HMLAPE
Trigger: CTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGA...AGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTAGGCAAATTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR CCA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACTTCTCCTACAGCAAGTaGTCAGCTTACTTATCACTG +
Preference number: 4 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHFSYSK*SAYLSL
Trigger: CAGTGATAAGTAAGCTGACCACTTGCTGTAGGAGAA...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGATTTGTAGGACACGTTaGAACTTCTCCTACAGCAAG +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVICRTR*NFSYSK
Trigger: CTTGCTGTAGGAGAAGTTCCAACGTGTCCTACAAAT...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCGTGGAGGAGGCAGCTaGATCTCTTCCATCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCRGGGS*ISSISH
Trigger: GTGGCTGATGGAAGAGATCCAGCTGCCTCCTCCACG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTTTGGTTGGAGGTGCTTaGCTGTCCCGCGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCLVGGA*LSRGSV
Trigger: CACGGAGCCGCGGGACAGCCAAGCACCTCCAACCAA...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTTCAAGATGGACAAACTaGTACATCACACCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAISRWTN*YITPLL
Trigger: CAGCAGGGGTGTGATGTACCAGTTTGTCCATCTTGA...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATCTAGGGCCGAGGCTCTaGCCCATGATTTTTCATGCA +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNLGPRL*PMIFHA
Trigger: TGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAG...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCAGACAGGCAGGCAGATaGGTAACTCGCTCGGGAACG +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIRQAGR*VTRSGT
Trigger: CGTTCCCGAGCGAGTTACCCATCTGCCTGCCTGTCT...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACACTGTGGATTTCCTTaGTGTGGGGTTTGCCTATTC +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRHCGFP*CGVCLF
Trigger: GAATAGGCAAACCCCACACCAAGGAAATCCACAGTG...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTAAAATTAGCCGGGCGTaGCAGTGCGTGCCTTTAATC +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVKISRA*QCVPLI
Trigger: GATTAAAGGCACGCACTGCCACGCCCGGCTAATTTT...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCCAAGGCTGCTTTCTCTaGGATGGGGCTGAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIQGCFL*DGAEWH
Trigger: GTGCCACTCAGCCCCATCCCAGAGAAAGCAGCCTTG...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCAAGGCTGCTTTCTCTaGGATGGGGCTGAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCQGCFL*DGAEWH
Trigger: GTGCCACTCAGCCCCATCCCAGAGAAAGCAGCCTTG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACTTTGATATACCTGTTTaGGCCTCACTGCTCATCAAC +
Preference number: 4 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHFDIPV*ASLLIN
Trigger: GTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CAA 72 bp CCTCTTGGCACCGCTGGTTTAGACAACTCACTTCATTaGAACTGCAGTTACGCAGAATGCAGAAATACGCAC +
Preference number: 4 (lower is better)
Translates to: PLGTAGLDNSLH*NCSYAECRNTH
Trigger: GTGCGTATTTCTGCATTCTGCGTAACTGCAGTTCAAATGAAGTGAGTTGTCTAAACCAGCGGTGCCAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
3UTR CAA 72 bp AAATGTCACATCACACCCACGCACTTCACTGAAGACTaGTGGCCTCCCAATGTCCTCATCTTCATCACACTT +
Preference number: 4 (lower is better)
Translates to: KCHITPTHFTED*WPPNVLIFITL
Trigger: AAGTGTGATGAAGATGAGGACATTGGGAGGCCACAAGTCTTCAGTGAAGTGCGTGGGTGTGATGTGACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAAACAGAGTCACCCACTaGATGATAAGTGCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRNRVTH*MISACL
Trigger: AAGACACGCACTTATCATTCAGTGGGTGACTCTGTT...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCATCCGCTGAAACCCTaGGCTGCATTCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCHPLKP*AAFITS
Trigger: GGAGGTGATGAATGCAGCTCAGGGTTTCAGCGGATG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGACTGGCTTCCAATTCTTaGGCTCTTCAGTTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: ILTLIISLITTSAMNKGRLASNS*ALQFGF
Trigger: AAACCCAAACTGAAGAGCTCAAGAATTGGAAGCCAG...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCCGTCCAAGGTTTCCTaGCTGTGCTTAGGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCPSKVS*LCLGQS
Trigger: TGACTGGCCTAAGCACAGTCAGGAAACCTTGGACGG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGAGTAATCCAGTTTCATTaGTTGCAGCCGTCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: ILTLIISLITTSAMNKGRVIQFH*LQPSKG
Trigger: TCCTTTGGACGGCTGCAATCAATGAAACTGGATTAC...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CACAATTTGCCTACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTCAACTTTGTCACCTATaGCACCCAGCTTCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: HNLPTVKCLVLTRIAQSTQLCHL*HPASAC
Trigger: ACACGCAGAAGCTGGGTGTCATAGGTGACAAAGTTG...AGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTAGGCAAATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR TCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTGAGAACCTGAAGAGATaGGACCTATACCCCAAATCT +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIENLKR*DLYPKS
Trigger: AGATTTGGGGTATAGGTCTCATCTCTTCAGGTTCTC...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCGTAAAGGTGGTATCATaGGAACCTGAAGAGATGAGA +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALVKVVS*EPEEMR
Trigger: TCTCATCTCTTCAGGTTCTCATGATACCACCTTTAC...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAAAAATACACTCATGTTaGAATCAAACAAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTKIHSC*NQTSQP
Trigger: TGGCTGGCTTGTTTGATTTCAACATGAGTGTATTTT...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTACCACGACTGCCCGTTaGCCCCATTCTCACAGAACA +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCTTTAR*PHSHRT
Trigger: TGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGT...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATCTCCCATCTGGTTGCTaGAGCGTCTCCATCTCTTTA +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNLPSGC*SVSISL
Trigger: TAAAGAGATGGAGACGCTTCAGCAACCAGATGGGAG...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGACAACTCACTTCATTTaGACTGCAGTTACGCAGAAT +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVTTHFI*TAVTQN
Trigger: ATTCTGCGTAACTGCAGTTCAAATGAAGTGAGTTGT...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR GCA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGACATTGTTATAGGGTGTaGCGCCTCTGTAGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: ILTLIISLITTSAMNKGRHCYRV*RLCSSV
Trigger: AACTGAACTACAGAGGCGGCACACCCTATAACAATG...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCCGATGCATATCGGTTaGAGCCCGGCACTGGATTCA +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCPMHIG*SPALDS
Trigger: TGAATCCAGTGCCGGGCTGCAACCGATATGCATCGG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGAAGACCCCACTGCGCTaGCCTGGCATCCAGGAATGT +
Preference number: 4 (lower is better)
Translates to: KGMENRMLSLRSLFITLEKTPLR*PGIQEC
Trigger: ACATTCCTGGATGCCAGGGCAGCGCAGTGGGGTCTT...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCTCATACAAGTTGCCATaGCTTGGGTCTTTCACCTCA +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTSYKLP*LGSFTS
Trigger: TGAGGTGAAAGACCCAAGGCATGGCAACTTGTATGA...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATAGGAGAAGAAGAGAGTaGATGTCTGCTTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNRRRRE*MSACPG
Trigger: CCCTGGACAAGCAGACATGCACTCTCTTCTTCTCCT...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTATCAAACCTCTTGAATaGAGGTCTGCCCACCGTCTT +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVIKPLE*RSAHRL
Trigger: AAGACGGTGGGCAGACCTGCATTCAAGAGGTTTGAT...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTGGCCGATCTGAGCCATaGCTTATTCCAATGACTGTA +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVGRSEP*LIPMTV
Trigger: TACAGTCATTGGAATAAGGCATGGCTCAGATCGGCC...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTGGTACATCACACCCCTaGTGGCAGGAAGAAACGGTG +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCGTSHP*WQEETV
Trigger: CACCGTTTCTTCCTGCCAGCAGGGGTGTGATGTACC...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTTGGCAGGAAAGGCGCTaGCGCCAGAATAAGAACACC +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCWQERR*RQNKNT
Trigger: GGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCA...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTTGCTGCAGGGCGGTTTaGTTCTCAGCAATAGAACAC +
Preference number: 4 (lower is better)
Translates to: ITTSAMNKGRQVNNRASICCRAV*FSAIEH
Trigger: GTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCA...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGGTACAGGCTGAGGGATaGTGCAGGGCGGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: KGMENRMLSLRSLFITLEVQAEG*CRAVCF
Trigger: GAAGCAAACCGCCCTGCAGCATCCCTCAGCCTGTAC...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCTGTGTACCCATCAGTaGTTTAACTTGTACAATGGA +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVLCTHQ*FNLYNG
Trigger: TCCATTGTACAAGTTAAAGCACTGATGGGTACACAG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp AAACTCAAAGTAAGTGTTTCGGATCCCTTGCCCAGAGTCGATATCTTGATGCAGTCCAAGTTCTGGGCTTaGTTCTGCCTTACCTATCCA +
Preference number: 4 (lower is better)
Translates to: KLKVSVSDPLPRVDILMQSKFWA*FCLTYP
Trigger: TGGATAGGTAAGGCAGAAGCAAGCCCAGAACTTGGA...CTGCATCAAGATATCGACTCTGGGCAAGGGATCCGAAACACTTACTTTGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR GCA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTTTGAACCTGACTTCCTaGTTCCTTCCAGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: ITTSAMNKGRQVNNRASILNLTS*FLPGLC
Trigger: ACAGAGCCCTGGAAGGAAGCAGGAAGTCAGGTTCAA...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTGCAATGAACAGGGGCTaGAGAGATCTCTTCAAGGTA +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVAMNRG*RDLFKV
Trigger: TACCTTGAAGAGATCTCTGCAGCCCCTGTTCATTGC...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTGGGTTGGTCTTGCTGTaGCAAGGGTGCCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCGLVLL*QGCQRW
Trigger: CCACCTCTGGCACCCTTGGCACAGCAAGACCAACCC...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATCGAGATGGATCCTCGTaGTATATGTGGTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNRDGSS*YMWSVC
Trigger: GCAGACAGACCACATATACCACGAGGATCCATCTCG...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGTGTTCAGCCTGCCCCTaGAGCAGACGAGATGGATCC +
Preference number: 4 (lower is better)
Translates to: KGMENRMLSLRSLFITLECSACP*SRRDGS
Trigger: GGATCCATCTCGTCTGCTCCAGGGGCAGGCTGAACA...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATTGGACTTGTCACTTGTaGGGCAGACGTCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNWTCHL*GRRLRK
Trigger: TTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCA...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGAAATTGGTAGTTGTCCCCATTaGTCCTCATGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: YSEMLSSDTYRSIHCQEIGSCPH*SSCPQR
Trigger: CCTCTGGGGACATGAGGACCAATGGGGACAACTACC...AATTTCTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR CCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCTCGTCGCTGTCGTCATaGAAGGACACCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMISSLSS*KDTSLV
Trigger: CACCAAGCTGGTGTCCTTCCATGACGACAGCGACGA...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCGCTTTATTGACTCACTaGACTCTAAACTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLALLTH*TLNSMF
Trigger: GAACATGGAGTTTAGAGTCCAGTGAGTCAATAAAGC...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCCCTCAGGAGAGGTATTaGAAAGTCCTTAAGAATAAC +
Preference number: 4 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLPQERY*KVLKNN
Trigger: GTTATTCTTAAGGACTTTCCAATACCTCTCCTGAGG...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACCCTCAGGAGAGGTATTaGAAAGTCCTTAAGAATAAC +
Preference number: 4 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHPQERY*KVLKNN
Trigger: GTTATTCTTAAGGACTTTCCAATACCTCTCCTGAGG...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCTGTCTCTGTCATTCATaGACAGTCTCAAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTCLCHS*TVSRKG
Trigger: CCCCTTTCTTGAGACTGTCCATGAATGACAGAGACA...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGATGTCTCTGTCATTCATaGACAGTCTCAAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: ILTLIISLITTSAMNKGRCLCHS*TVSRKG
Trigger: CCCCTTTCTTGAGACTGTCCATGAATGACAGAGACA...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTTGGATTTCCTTGGTGTaGGGTTTGCCTATTCCATCT +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIWISLV*GLPIPS
Trigger: AGATGGAATAGGCAAACCCCACACCAAGGAAATCCA...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CAA 72 bp CATAAGAACCAGATTTCCACTTCACTGTGGATTTCCTaGGTGTGGGGTTTGCCTATTCCATCTTTAGCACCC +
Preference number: 4 (lower is better)
Translates to: HKNQISTSLWIS*VWGLPIPSLAP
Trigger: GGGTGCTAAAGATGGAATAGGCAAACCCCACACCAAGGAAATCCACAGTGAAGTGGAAATCTGGTTCTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CAA 72 bp CGCGGTTTCAAACTCAAAGTAAGTGTTTCGGATCCCTaGCCCAGAGTCGATATCTTGATGCAGGAATTTGAG +
Preference number: 4 (lower is better)
Translates to: RGFKLKVSVSDP*PRVDILMQEFE
Trigger: CTCAAATTCCTGCATCAAGATATCGACTCTGGGCAAGGGATCCGAAACACTTACTTTGAGTTTGAAACCGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR TCA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCACCATTTTTCTTTGTaGGAGGTGATAAGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVHHFSL*EVISQK
Trigger: CTTTTGACTTATCACCTCTCACAAAGAAAAATGGTG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGCTGGCTTCCAATTCTTaGGCTCTTCAGTTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: IGPHVPRGSEQLKINISELASNS*ALQFGF
Trigger: AAACCCAAACTGAAGAGCTCAAGAATTGGAAGCCAG...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTATGCCATCTCTCCACTaGGGTCCGTCCCTTACCCTG +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCMPSLH*GPSLTL
Trigger: CAGGGTAAGGGACGGACCTCAGTGGAGAGATGGCAT...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTAACCTTTGGAGTACGTaGCAACAACTTTGTCACCTA +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAINLWST*QQLCHL
Trigger: TAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTT...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGAGCTGCCCCATACACTaGCAGCCTCACCATCTCAAG +
Preference number: 4 (lower is better)
Translates to: KGMENRMLSLRSLFITLESCPIH*QPHHLK
Trigger: CTTGAGATGGTGAGGCTGTCAGTGTATGGGGCAGCT...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAGACTCTGGAGAAAAATaGAAGTGCTGCCTCATAAAG +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRDSGEK*KCCLIK
Trigger: CTTTATGAGGCAGCACTTTCATTTTTCTCCAGAGTC...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTTGTAGGAATGCCTGGTaGTGGGAAGAAACTTCATCT +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVCRNAW*WEETSS
Trigger: AGATGAAGTTTCTTCCCATCACCAGGCATTCCTACA...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCATACAACCTCCTGGTaGCACACACACTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCHTTSW*HTHWLL
Trigger: AAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTATG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACGTTTCCCTCAAACACTaGGCATCAAAACAACATTAT +
Preference number: 4 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHVSLKH*ASKQHY
Trigger: ATAATGTTGTTTTGATGCTCAGTGTTTGAGGGAAAC...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATTTCATGTTGCATAGCTaGACCTCTGCACCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNFMLHS*TSAPFH
Trigger: GTGAAAGGGTGCAGAGGTTCAGCTATGCAACATGAA...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCAGAGGATTGAGATCATaGTTCCTCAACTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALRGLRS*FLNSSS
Trigger: TGATGAAGAGTTGAGGAAGCATGATCTCAATCCTCT...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTGTGGTATCTTCCTGCTaGTTTGACTTGAGAGGTATC +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVVVSSC*FDLRGI
Trigger: GATACCTCTCAAGTCAAAGCAGCAGGAAGATACCAC...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTGACACCCTCGTGCCTTaGCTTCCTGCAGCACTCTGT +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCDTLVP*LPAALC
Trigger: ACAGAGTGCTGCAGGAAGGCAAGGCACGAGGGTGTC...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCTATATGTGGTCTGTCTaGCATCGCTGGTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIYMWSV*HRWWCR
Trigger: CCTGCACCACCAGCGATGGCAGACAGACCACATATA...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTAATTCCGACTGGCCTTaGTGGCTTCCAATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: ITTSAMNKGRQVNNRASINSDWP*WLPILE
Trigger: CTCAAGAATTGGAAGCCAGCAAGGCCAGTCGGAATT...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTTCATACAAGTTGCCATaGCTTGGGTCTTTCACCTCA +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVSYKLP*LGSFTS
Trigger: TGAGGTGAAAGACCCAAGGCATGGCAACTTGTATGA...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATCATTCTCCCCACAGATaGTCATGTAAACCAACCCCT +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNHSPHR*SCKPTP
Trigger: AGGGGTTGGTTTACATGAGCATCTGTGGGGAGAATG...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp TTGCCTACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGTTCTATCACGGAGGATaGGGTCTTATTTCCACCACA +
Preference number: 4 (lower is better)
Translates to: LPTVKCLVLTRIAQSTVKFYHGG*GLISTT
Trigger: TGTGGTGGAAATAAGACCGCATCCTCCGTGATAGAA...CTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR GCA 90 bp CCTACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGAAAATCAAACCTCTTGAATaGAGGTCTGCCCACCGTCTT +
Preference number: 4 (lower is better)
Translates to: PTVKCLVLTRIAQSTVKKIKPLE*RSAHRL
Trigger: AAGACGGTGGGCAGACCTGCATTCAAGAGGTTTGAT...TTTCTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR GCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTGCTCCTGAAGGGCATTaGTCTGTGCGTTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCAPEGH*SVRFSL
Trigger: CAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAGTAAGTCACACACTGTaGAAATTAAGGCTTCTTATA +
Preference number: 4 (lower is better)
Translates to: PEVEEVEEGADASGVTFTVSHTL*KLRLLI
Trigger: TATAAGAAGCCTTAATTTGCACAGTGTGTGACTTAC...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATACTGGAGTAACTTCCTaGTTCCATGCAGGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNTGVTS*FHAGSS
Trigger: AGAGCTACCTGCATGGAAGCAGGAAGTTACTCCAGT...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGGCCCCCTGGGTAGAATaGCTGAGGACCAGCATCTTT +
Preference number: 4 (lower is better)
Translates to: KGMENRMLSLRSLFITLEAPWVE*LRTSIF
Trigger: AAAGATGCTGGTCCTCAGGCATTCTACCCAGGGGGC...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGAAGTCCAATTCTGATTTaGTGTCACGGGATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: ILTLIISLITTSAMNKGRSPILI*CHGMFS
Trigger: GGAAAACATCCCGTGACAGCAAATCAGAATTGGACT...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTCCTTCCAGGGCTCTGTaGTCCACCCTGTCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCPSRAL*STLSLA
Trigger: TGCTAGAGACAGGGTGGAGCACAGAGCCCTGGAAGG...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTTTCCACGGGGCACACTaGGAAAAATGTTTCTATATG +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIFHGAH*EKCFYM
Trigger: CATATAGAAACATTTTTCGCAGTGTGCCCCGTGGAA...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTATGTCTAGGAATTGCTaGCTACCTGGAGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCMSRNC*LPGGLL
Trigger: CAGCAGGCCTCCAGGTAGGCAGCAATTCCTAGACAT...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCACTGTGTTTATGATGTaGATTTCCCTGATGATCAGC +
Preference number: 4 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALTVFMM*ISLMIS
Trigger: GCTGATCATCAGGGAAATGCACATCATAAACACAGT...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATGCAATGAACAGGGGCTaGAGAGATCTCTTCAAGGTA +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNAMNRG*RDLFKV
Trigger: TACCTTGAAGAGATCTCTGCAGCCCCTGTTCATTGC...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCATTCCAGGAGAGATCTaGTTGCACTTCTCAAAACAG +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTIPGEI*LHFSKQ
Trigger: CTGTTTTGAGAAGTGCAACCAGATCTCTCCTGGAAT...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCTTTTCATACTTCATCTaGCAAGCCGATGCATATCGG +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTFSYFI*QADAYR
Trigger: CCGATATGCATCGGCTTGCCAGATGAAGTATGAAAA...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGATTTTCATACTTCATCTaGCAAGCCGATGCATATCGG +
Preference number: 4 (lower is better)
Translates to: ILTLIISLITTSAMNKGRFSYFI*QADAYR
Trigger: CCGATATGCATCGGCTTGCCAGATGAAGTATGAAAA...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTTTTCTCAATTCCGACTaGCCTTGCTGGCTTCCAATT +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVFLNSD*PCWLPI
Trigger: AATTGGAAGCCAGCAAGGCCAGTCGGAATTGAGAAA...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTGCCAGGTCGGTGACTTaGCAGTCCACTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCARSVT*QSTGEG
Trigger: TCCTTCTCCAGTGGACTGCCAAGTCACCGACCTGGC...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTAGAAGAAGATGGCTGTaGAGCGCTGATAAACCTTAT +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIRRRWL*SADKPY
Trigger: ATAAGGTTTATCAGCGCTCCACAGCCATCTTCTTCT...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGCAAAGGATGCCCCCTTaGTGCCTGAGAGCAGACAGA +
Preference number: 4 (lower is better)
Translates to: KGMENRMLSLRSLFITLEQRMPP*CLRADR
Trigger: TCTGTCTGCTCTCAGGCACCAAGGGGGCATCCTTTG...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTGCCGTCATCGGTTTCTaGAGGGCAACGATCACCATT +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCAVIGF*RATITI
Trigger: AATGGTGATCGTTGCCCTCCAGAAACCGATGACGGC...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CATCATAATATGAAAGCTTCGCATTACTCAGACCCAAGTTCCAAGTCTTCTCATGGACGTCACCAGTTGTaGTCCTTCTGCAAATGCTGG +
Preference number: 4 (lower is better)
Translates to: HHNMKASHYSDPSSKSSHGRHQL*SFCKCW
Trigger: CCAGCATTTGCAGAAGGACCACAACTGGTGACGTCC...ATGAGAAGACTTGGAACTTGGGTCTGAGTAATGCGAAGCTTTCATATTATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR CCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCTCGTTGGGCTTCACCTaGCATATGTTGGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMISLGFT*HMLAPE
Trigger: CTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGA...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCTAGGGCCGAGGCTCTaGCCCATGATTTTTCATGCA +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCLGPRL*PMIFHA
Trigger: TGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTACAGGCTCCAAGTTCTaGGCTTGCTTCTGCCTTACC +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCTGSKF*ACFCLT
Trigger: GGTAAGGCAGAAGCAAGCCCAGAACTTGGAGCCTGT...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCACAGGCTCCAAGTTCTaGGCTTGCTTCTGCCTTACC +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMITGSKF*ACFCLT
Trigger: GGTAAGGCAGAAGCAAGCCCAGAACTTGGAGCCTGT...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCCAGATGACCTCACCTaGGTTGTGAGCCCCTCATTT +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCPDDLT*VVSPSF
Trigger: AAATGAGGGGCTCACAACCCAGGTGAGGTCATCTGG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTCATGTGTCAAGGTCATaGAGGTTACAGAAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIHVSRS*RLQKGE
Trigger: TTCTCCTTTCTGTAACCTCCATGACCTTGACACATG...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGAGGAGGGCACGGCTCATaGCTATTATTTCTATCTATT +
Preference number: 4 (lower is better)
Translates to: ILTLIISLITTSAMNKGRGGHGS*LLFLSI
Trigger: AATAGATAGAAATAATAGCCATGAGCCGTGCCCTCC...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677704.1
3UTR CAA 72 bp ATTTCCACTTCACTGTGGATTTCCTTGGTGTGGGGTTaGCCTATTCCATCTTTAGCACCCCAGTTCTTATTC +
Preference number: 4 (lower is better)
Translates to: ISTSLWISLVWG*PIPSLAPQFLF
Trigger: GAATAAGAACTGGGGTGCTAAAGATGGAATAGGCAAACCCCACACCAAGGAAATCCACAGTGAAGTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CAA 72 bp CCTATGCCAACGGGATTTTCTAGTTCAAGTATGATTTaGCAGTTAGACCCAAGGGCCCTCTCCCTAATTGTT +
Preference number: 4 (lower is better)
Translates to: PMPTGFSSSSMI*QLDPRALSLIV
Trigger: AACAATTAGGGAGAGGGCCCTTGGGTCTAACTGCAAAATCATACTTGAACTAGAAAATCCCGTTGGCATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTCAAAATATATCAAGGTaGGGTCTCCATCCGAATATC +
Preference number: 4 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLQNISR*GLHPNI
Trigger: GATATTCGGATGGAGACCTCACCTTGATATATTTTG...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTCATCCCATCATAATATaGAAGCTTCGCATTACTCAG +
Preference number: 4 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLHPIII*KLRITQ
Trigger: CTGAGTAATGCGAAGCTTTCATATTATGATGGGATG...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATTGCCAGCCCCATCTTTaGATGAACATTCAGTCAGAT +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNCQPHL*MNIQSD
Trigger: ATCTGACTGAATGTTCATTCAAAGATGGGGCTGGCA...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTGTGGCTGACAAATATTaGTGTAGAAATCAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVVADKY*CRNQGW
Trigger: CCAACCCTGATTTCTACATCAATATTTGTCAGCCAC...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTTCGCCCTGCTCTCTATaGTGCACTCCTCGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCSPCSL*CTPRSS
Trigger: AGAGCTACGAGGAGTGCATCATAGAGAGCAGGGCGA...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTTTCCGACTGAAGTGCTaGTCGTTGGGCTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCFRLKC*SLGFTW
Trigger: CCAGGTGAAGCCCAACGATCAGCACTTCAGTCGGAA...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATGGTATCATGAGAACCTaGAGAGATGAGACCTATACC +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNGIMRT*RDETYT
Trigger: GGTATAGGTCTCATCTCTTCAGGTTCTCATGATACC...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp AAACTCAAAGTAAGTGTTTCGGATCCCTTGCCCAGAGTCGATATCTTGATGCAGGACTCTGGAGAAAAATaGAAGTGCTGCCTCATAAAG +
Preference number: 4 (lower is better)
Translates to: KLKVSVSDPLPRVDILMQDSGEK*KCCLIK
Trigger: CTTTATGAGGCAGCACTTTCATTTTTCTCCAGAGTC...CTGCATCAAGATATCGACTCTGGGCAAGGGATCCGAAACACTTACTTTGAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR TCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTAAGGAAAGAAAGACCTaGCTTCCTCCCAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCKERKT*LPPRES
Trigger: GCTCTCTCTGGGAGGAAGTCAGGTCTTTCTTTCCTT...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGACCTCACCTGGGTTGTaGGCCCCTCATTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: KGMENRMLSLRSLFITLETSPGL*APHFHS
Trigger: AGAGTGAAAATGAGGGGCTCACAACCCAGGTGAGGT...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTCCATTCTGGCAGGTGTaGGGCAACGTCTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCPFWQV*GNVSLC
Trigger: ACACAGTGAGACGTTGCCTCACACCTGCCAGAATGG...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATCCACTGAATGATAAGTaGGTGTCTTCAAGTCGTGCA +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNPLNDK*VSSSRA
Trigger: TGCACGACTTGAAGACACGCACTTATCATTCAGTGG...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGAGTGCACACATTCTGTTaGAGTTACAAATTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: ILTLIISLITTSAMNKGRVHTFC*SYKFRS
Trigger: ACTCCTGAATTTGTAACTGCAACAGAATGTGTGCAC...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCGAGACGTTATATCCTTaGGAACTGTTTAGCGGATTA +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTETLYP*ELFSGL
Trigger: TAATCCGCTAAACAGTTCGCAAGGATATAACGTCTC...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTTCATACAAGTTGCCATaGCTTGGGTCTTTCACCTCA +
Preference number: 4 (lower is better)
Translates to: ITTSAMNKGRQVNNRASISYKLP*LGSFTS
Trigger: TGAGGTGAAAGACCCAAGGCATGGCAACTTGTATGA...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGAAGGGCATTGCTCTGTaGGTTTCTCACTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: KGMENRMLSLRSLFITLEKGIAL*VSHWVG
Trigger: TCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTT...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTTTATTTGGTTGGAGGTaGTTGGCTGTCCCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCLFGWR*LAVPRL
Trigger: GAGCCGCGGGACAGCCAAGCACCTCCAACCAAATAA...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTAGTCCAATTCTGATTTaGTGTCACGGGATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVSPILI*CHGMFS
Trigger: GGAAAACATCCCGTGACAGCAAATCAGAATTGGACT...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTCTGTGTACCCATCAGTaGTTTAACTTGTACAATGGA +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAILCTHQ*FNLYNG
Trigger: TCCATTGTACAAGTTAAAGCACTGATGGGTACACAG...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGATGTCTAGGAATTGCTaGCTACCTGGAGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: KGMENRMLSLRSLFITLEMSRNC*LPGGLL
Trigger: CAGCAGGCCTCCAGGTAGGCAGCAATTCCTAGACAT...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp AAACTCAAAGTAAGTGTTTCGGATCCCTTGCCCAGAGTCGATATCTTGATGCAGATTCCAGGAGAGATCTaGTTGCACTTCTCAAAACAG +
Preference number: 4 (lower is better)
Translates to: KLKVSVSDPLPRVDILMQIPGEI*LHFSKQ
Trigger: CTGTTTTGAGAAGTGCAACCAGATCTCTCCTGGAAT...CTGCATCAAGATATCGACTCTGGGCAAGGGATCCGAAACACTTACTTTGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR CCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCCCCTGAGTTGTCCATaGCATACCAGTTTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCPLSCP*HTSFLQ
Trigger: TTGGAGGAAACTGGTATGCCATGGACAACTCAGGGG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCCGAGATGGATCCTCGTaGTATATGTGGTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIRDGSS*YMWSVC
Trigger: GCAGACAGACCACATATACCACGAGGATCCATCTCG...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTGCACTCCAACTTCTTTaGAGGGCAGACAACTTTTGT +
Preference number: 4 (lower is better)
Translates to: ITTSAMNKGRQVNNRASIALQLL*RADNFC
Trigger: ACAAAAGTTGTCTGCCCTCCAAAGAAGTTGGAGTGC...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTAGTGGAAGAAGATGGTaGAAGAAACAGACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVSGRRW*KKQTWS
Trigger: AGACCAAGTCTGTTTCTTCCACCATCTTCTTCCACT...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTATTTGTAGGACACGTTaGAACTTCTCCTACAGCAAG +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVICRTR*NFSYSK
Trigger: CTTGCTGTAGGAGAAGTTCCAACGTGTCCTACAAAT...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTTCTGCTGTGCAGAGCTaGACTTCCCTTTCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCSAVQS*TSLSSP
Trigger: AGGCGAGGAAAGGGAAGTCCAGCTCTGCACAGCAGA...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGGAATTGCTGCCTACCTaGAGGCCTGCTGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: KGMENRMLSLRSLFITLEELLPT*RPAGHF
Trigger: AAAATGGCCAGCAGGCCTCCAGGTAGGCAGCAATTC...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTCATTCTCACCAAAGGTaGACAAGTGTTCGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVHSHQR*TSVRFS
Trigger: AGAAAAGCGAACACTTGTCCACCTTTGGTGAGAATG...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TTGCCTACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGAAATGTGGAACTTTGTaGGAAGCCACGGATTACCTT +
Preference number: 4 (lower is better)
Translates to: LPTVKCLVLTRIAQSTVKKCGTL*EATDYL
Trigger: AAGGTAATCCGTGGCTTCCCACAAAGTTCCACATTT...CTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
3UTR CAA 72 bp CTGTTTAGCGGATTAAGATTAAACACAAATCCACTGTaGGGATCCCTTATAGAGCAAGCCTGGTCTGTATCC +
Preference number: 4 (lower is better)
Translates to: LFSGLRLNTNPL*GSLIEQAWSVS
Trigger: GGATACAGACCAGGCTTGCTCTATAAGGGATCCCAACAGTGGATTTGTGTTTAATCTTAATCCGCTAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR TCA 90 bp CATCATAATATGAAAGCTTCGCATTACTCAGACCCAAGTTCCAAGTCTTCTCATCCTGCTGCTTTGACTTaGGAGGTATCGCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: HHNMKASHYSDPSSKSSHPAALT*EVSLFF
Trigger: GAAAAAGAGCGATACCTCTCAAGTCAAAGCAGCAGG...ATGAGAAGACTTGGAACTTGGGTCTGAGTAATGCGAAGCTTTCATATTATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR TCA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTTTAATTTTCTTGCCATaGCCACAATCATCACCATCT +
Preference number: 4 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAILIFLP*PQSSPS
Trigger: AGATGGTGATGATTGTGGTCATGGCAAGAAAATTAA...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTCGATATCAAACCTCTTaGATGCAGGTCTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCRYQTS*MQVCPP
Trigger: CGGTGGGCAGACCTGCATTCAAGAGGTTTGATATCG...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCGGTTTCTGGAGCTTGTaGTGGAGGAAAGTTGGATCT +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIGFWSL*WRKVGS
Trigger: AGATCCAACTTTCCTCCATCACAAGCTCCAGAAACC...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGAAATTGGTTTCTGGAGCTTGTaGTGGAGGAAAGTTGGATCT +
Preference number: 4 (lower is better)
Translates to: YSEMLSSDTYRSIHCQEIGFWSL*WRKVGS
Trigger: AGATCCAACTTTCCTCCATCACAAGCTCCAGAAACC...AATTTCTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR TCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGAAGGAAAGAAAGACCTaGCTTCCTCCCAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: KGMENRMLSLRSLFITLEKERKT*LPPRES
Trigger: GCTCTCTCTGGGAGGAAGTCAGGTCTTTCTTTCCTT...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCAGTTTTCTAAGTGTTTaGTGTAAGCTTGGGCAAACA +
Preference number: 4 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTSFLSV*CKLGQT
Trigger: TGTTTGCCCAAGCTTACATCAAACACTTAGAAAACT...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678224.1
CDS-3UTR GCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCAGTTCTCAACACTGGTaGACTTTCCAGATCACCTGG +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMISSQHW*TFQITW
Trigger: CCAGGTGATCTGGAAAGTGCACCAGTGTTGAGAACT...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATGTTTCTGGACGAATTTaGACTCCAACTTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNVSGRI*TPTSLE
Trigger: CTCCAAAGAAGTTGGAGTGCAAATTCGTCCAGAAAC...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTGCCCATGATTTTTCATaGAGTTTCTGTAAGTCACAC +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVAHDFS*SFCKSH
Trigger: GTGTGACTTACAGAAACTGCATGAAAAATCATGGGC...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTATTCCAGGAGAGATCTaGTTGCACTTCTCAAAACAG +
Preference number: 4 (lower is better)
Translates to: ITTSAMNKGRQVNNRASIIPGEI*LHFSKQ
Trigger: CTGTTTTGAGAAGTGCAACCAGATCTCTCCTGGAAT...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGAATCAAACACATAGCATaGCACCTCCTTATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: FDIPVWASLLINGVVSYRIKHIA*HLLICF
Trigger: AAAGCAAATAAGGAGGTGCCATGCTATGTGTTTGAT...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCTTATAGAGCAAGCCTaGTCTGTATCCGTCGTTGTC +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCLIEQA*SVSVVV
Trigger: GACAACGACGGATACAGACCAGGCTTGCTCTATAAG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGTATTGGATTGAGTATTaGTGGTCCTGCTACCCGGCC +
Preference number: 4 (lower is better)
Translates to: KGMENRMLSLRSLFITLEYWIEY*WSCYPA
Trigger: GGCCGGGTAGCAGGACCACCAATACTCAATCCAATA...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTAGAAGCATCATCGAGTaGAAGTCTTATTTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVRSIIE*KSYLVG
Trigger: TCCAACCAAATAAGACTTCCACTCGATGATGCTTCT...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCACTGTGGATTTCCTTaGTGTGGGGTTTGCCTATTC +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCHCGFP*CGVCLF
Trigger: GAATAGGCAAACCCCACACCAAGGAAATCCACAGTG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTTCTTTAATCACCAGGTaGCATCTTAGTCGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: ITTSAMNKGRQVNNRASISLITR*HLSRVK
Trigger: CTTCACACGACTAAGATGCCACCTGGTGATTAAAGA...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp AAACTCAAAGTAAGTGTTTCGGATCCCTTGCCCAGAGTCGATATCTTGATGCAGAAAATACACTCATGTTaGAATCAAACAAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KLKVSVSDPLPRVDILMQKIHSC*NQTSQP
Trigger: TGGCTGGCTTGTTTGATTTCAACATGAGTGTATTTT...CTGCATCAAGATATCGACTCTGGGCAAGGGATCCGAAACACTTACTTTGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR TCA 90 bp GTGGAAGAAGATGGTGGAAGAAACAGACTTGGTCTTATCCTTTCCGCACTTAGAAAAATACACTCATGTTaGAATCAAACAAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VEEDGGRNRLGLILSALRKIHSC*NQTSQP
Trigger: TGGCTGGCTTGTTTGATTTCAACATGAGTGTATTTT...TCTAAGTGCGGAAAGGATAAGACCAAGTCTGTTTCTTCCACCATCTTCTTCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCAACAATGTCCAGAACTaGCAGCAAGTATGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMINNVQN*QQVWLK
Trigger: CTTGAGCCATACTTGCTGTCAGTTCTGGACATTGTT...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTAAGGAAAGAAAGACCTaGCTTCCTCCCAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCKERKT*LPPRES
Trigger: GCTCTCTCTGGGAGGAAGTCAGGTCTTTCTTTCCTT...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTAGAAATACAAATAACTaGCCATTCACAGCCTACCTT +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVRNTNN*PFTAYL
Trigger: AAGGTAGGCTGTGAATGGTCAGTTATTTGTATTTCT...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTGTTTCCCTCAAACACTaGGCATCAAAACAACATTAT +
Preference number: 4 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVVSLKH*ASKQHY
Trigger: ATAATGTTGTTTTGATGCTCAGTGTTTGAGGGAAAC...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCGGCCATTTTCTATTGTaGTTTCACGTGTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIGHFLL*FHVWSA
Trigger: TGCTGACCACACGTGAAATCACAATAGAAAATGGCC...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp CACAATTTGCCTACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCCGAGATTTCAACTaGAGGGAGTTAGTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: HNLPTVKCLVLTRIAQSTVRDFN*RELVEN
Trigger: ATTTTCAACTAACTCCCTTCAGTTGAAATCTCGGAC...AGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTAGGCAAATTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR GCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCAGGAGAGATCTGGTTaGACTTCTCAAAACAGAGTC +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCQERSG*TSQNRV
Trigger: GACTCTGTTTTGAGAAGTGCAACCAGATCTCTCCTG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGACAGGAAGGCAATGCTaGTCTGGACTCTGTGATTTG +
Preference number: 4 (lower is better)
Translates to: KGMENRMLSLRSLFITLETGRQC*SGLCDL
Trigger: CAAATCACAGAGTCCAGAGCAGCATTGCCTTCCTGT...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGGGCCGATCTGAGCCATaGCTTATTCCAATGACTGTA +
Preference number: 4 (lower is better)
Translates to: KGMENRMLSLRSLFITLEGRSEP*LIPMTV
Trigger: TACAGTCATTGGAATAAGGCATGGCTCAGATCGGCC...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTTCAATGTGGCTATCTTaGCGCCTTGCACACAAGCTC +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCSMWLS*RLAHKL
Trigger: GAGCTTGTGTGCAAGGCGGCAAGATAGCCACATTGA...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGTCCAAGTTCTGGGCTTaGTTCTGCCTTACCTATCCA +
Preference number: 4 (lower is better)
Translates to: KGMENRMLSLRSLFITLESKFWA*FCLTYP
Trigger: TGGATAGGTAAGGCAGAAGCAAGCCCAGAACTTGGA...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCAGGACCACTCGAAATaGATCCAAGAGACACATCAT +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCQDHSK*IQETHH
Trigger: ATGATGTGTCTCTTGGATGCATTTCGAGTGGTCCTG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678224.1
CDS-3UTR CCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCTGTAGAAATCAGGGTTaGTATCGGAGGCATCATCCT +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMICRNQG*YRRHHP
Trigger: AGGATGATGCCTCCGATACCAACCCTGATTTCTACA...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTTATTGGATTGAGTATTaGTGGTCCTGCTACCCGGCC +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCYWIEY*WSCYPA
Trigger: GGCCGGGTAGCAGGACCACCAATACTCAATCCAATA...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCAGTGGAAGTCTTATTTaGTTGGAGGTGCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMISGSLI*LEVLGC
Trigger: ACAGCCAAGCACCTCCAACCAAATAAGACTTCCACT...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATGCTTTATTGACTCACTaGACTCTAAACTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNALLTH*TLNSMF
Trigger: GAACATGGAGTTTAGAGTCCAGTGAGTCAATAAAGC...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCATTTCCACTTCACTGTaGATTTCCTTGGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIISTSL*ISLVWG
Trigger: ACCCCACACCAAGGAAATCCACAGTGAAGTGGAAAT...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTATCTTCCTGCTGCTTTaGCTTGAGAGGTATCGCTCT +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCIFLLL*LERYRS
Trigger: AGAGCGATACCTCTCAAGTCAAAGCAGCAGGAAGAT...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTCTTGATGCAGGAATTTaGGGGGCCCTGAGTAAACAT +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCLDAGI*GALSKH
Trigger: ATGTTTACTCAGGGCCCCTCAAATTCCTGCATCAAG...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGAAATTAACCTTTGGAGTACGTaGCAACAACTTTGTCACCTA +
Preference number: 4 (lower is better)
Translates to: YSEMLSSDTYRSIHCQEINLWST*QQLCHL
Trigger: TAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTT...AATTTCTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR TCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTTTTGGGCAGGTTGTTTaGATTCACCAGCCGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCFGQVV*IHQPAK
Trigger: TTTTGCCGGCTGGTGAATTCAAACAACCTGCCCAAA...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGTGTAGGAATGCCTGGTaGTGGGAAGAAACTTCATCT +
Preference number: 4 (lower is better)
Translates to: KGMENRMLSLRSLFITLECRNAW*WEETSS
Trigger: AGATGAAGTTTCTTCCCATCACCAGGCATTCCTACA...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTGTTTCCCTCAAACACTaGGCATCAAAACAACATTAT +
Preference number: 4 (lower is better)
Translates to: ITTSAMNKGRQVNNRASIVSLKH*ASKQHY
Trigger: ATAATGTTGTTTTGATGCTCAGTGTTTGAGGGAAAC...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATGTTTCCCTCAAACACTaGGCATCAAAACAACATTAT +
Preference number: 4 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNVSLKH*ASKQHY
Trigger: ATAATGTTGTTTTGATGCTCAGTGTTTGAGGGAAAC...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCAAAAAGGGAAATTGCTaGCTTGCCTGCTTTGTGGTT +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIKKGNC*LACFVV
Trigger: AACCACAAAGCAGGCAAGTCAGCAATTTCCCTTTTT...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678224.1
CDS-3UTR TCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTGGCATGAGAATCACTTaGATCTGGGAAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCGMRIT*IWEAEV
Trigger: AACCTCTGCTTCCCAGATTCAAGTGATTCTCATGCC...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678224.1
CDS-3UTR GCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTATTGTGGTATCTTCCTaGTGCTTTGACTTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCIVVSS*CFDLRG
Trigger: ACCTCTCAAGTCAAAGCAGCAGGAAGATACCACAAT...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTTCCAGTTTCATTGATTaGAGCCGTCCAAAGGATGCC +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCSSFID*SRPKDA
Trigger: GGCATCCTTTGGACGGCTGCAATCAATGAAACTGGA...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCTCATCTAGACTATCTTaGTCAAAAGCCCAATCTGGC +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMISSRLS*SKAQSG
Trigger: GCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGA...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGAAATTCTTGAAGGTAGTACTTaGTCTTGTCAGAGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: YSEMLSSDTYRSIHCQEILEGST*SCQRFQ
Trigger: TTGGAACCTCTGACAAGACCAAGTACTACCTTCAAG...AATTTCTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR CCA 90 bp CATCATAATATGAAAGCTTCGCATTACTCAGACCCAAGTTCCAAGTCTTCTCATATTTGTAGGACACGTTaGAACTTCTCCTACAGCAAG +
Preference number: 4 (lower is better)
Translates to: HHNMKASHYSDPSSKSSHICRTR*NFSYSK
Trigger: CTTGCTGTAGGAGAAGTTCCAACGTGTCCTACAAAT...ATGAGAAGACTTGGAACTTGGGTCTGAGTAATGCGAAGCTTTCATATTATGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR CCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCATGTGTCAAGGTCATaGAGGTTACAGAAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCHVSRS*RLQKGE
Trigger: TTCTCCTTTCTGTAACCTCCATGACCTTGACACATG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CAA 72 bp CACACAAACACACAAATCAATCTTTGGGCAGGTTGTTaGAATTCACCAGCCGGCAAAAATACTGACAAATGT +
Preference number: 4 (lower is better)
Translates to: HTNTQINLWAGC*NSPAGKNTDKC
Trigger: ACATTTGTCAGTATTTTTGCCGGCTGGTGAATTCAAACAACCTGCCCAAAGATTGATTTGTGTGTTTGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTAGAGGATTGAGATCATaGTTCCTCAACTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCRGLRS*FLNSSS
Trigger: TGATGAAGAGTTGAGGAAGCATGATCTCAATCCTCT...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCAGAGGATTGAGATCATaGTTCCTCAACTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIRGLRS*FLNSSS
Trigger: TGATGAAGAGTTGAGGAAGCATGATCTCAATCCTCT...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTGTGGTATCTTCCTGCTaGTTTGACTTGAGAGGTATC +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCVVSSC*FDLRGI
Trigger: GATACCTCTCAAGTCAAAGCAGCAGGAAGATACCAC...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTTGTAAGGGAGAGGATTaGAAACGCTCAAATAGAAAG +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCCKGED*KRSNRK
Trigger: CTTTCTATTTGAGCGTTTGCAATCCTCTCCCTTACA...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR GCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCAAGAGTCAAAGCAAATaGACTCAAACGTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIKSQSK*TQTCCH
Trigger: GTGACAACACGTTTGAGTGCATTTGCTTTGACTCTT...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCGACAATCCATACCTATaGCAACGGGATTTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIDNPYL*QRDFLV
Trigger: AACTAGAAAATCCCGTTGGCATAGGTATGGATTGTC...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTGACAATCCATACCTATaGCAACGGGATTTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCDNPYL*QRDFLV
Trigger: AACTAGAAAATCCCGTTGGCATAGGTATGGATTGTC...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTAGGATTTCCTTCTTCTaGAAGACTTGGTATTCCACT +
Preference number: 4 (lower is better)
Translates to: QASDALKMFIRTRFPLHCRISFF*KTWYST
Trigger: AGTGGAATACCAAGTCTTGCAGAAGAAGGAAATCCT...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
3UTR CAA 72 bp CTGAGGAATCATCTCGTGTTACGTATTATTTTAGGGTaGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGT +
Preference number: 4 (lower is better)
Translates to: LRNHLVLRIILG*VKYRLQMLLKC
Trigger: ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAACACGAGATGATTCCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR TCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTAACCTTTGGAGTACGTaGCAACAACTTTGTCACCTA +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCNLWST*QQLCHL
Trigger: TAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTT...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR TCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTAAAAGAGTCCAATTCTaGTTTGCTGTCACGGGATGT +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCKRVQF*FAVTGC
Trigger: ACATCCCGTGACAGCAAATCAGAATTGGACTCTTTT...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTAGTCCAATTCTGATTTaGTGTCACGGGATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCSPILI*CHGMFS
Trigger: GGAAAACATCCCGTGACAGCAAATCAGAATTGGACT...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGAGGATTTCCTTCTTCTaGAAGACTTGGTATTCCACT +
Preference number: 4 (lower is better)
Translates to: KGMENRMLSLRSLFITLERISFF*KTWYST
Trigger: AGTGGAATACCAAGTCTTGCAGAAGAAGGAAATCCT...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCGTAAGTCACACACTGTaGAAATTAAGGCTTCTTATA +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIVSHTL*KLRLLI
Trigger: TATAAGAAGCCTTAATTTGCACAGTGTGTGACTTAC...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTAAGAGTCAAAGCAAATaGACTCAAACGTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCKSQSK*TQTCCH
Trigger: GTGACAACACGTTTGAGTGCATTTGCTTTGACTCTT...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR GCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTACTGTGTTTATGATGTaGATTTCCCTGATGATCAGC +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCTVFMM*ISLMIS
Trigger: GCTGATCATCAGGGAAATGCACATCATAAACACAGT...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTGCTTTATTGACTCACTaGACTCTAAACTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCALLTH*TLNSMF
Trigger: GAACATGGAGTTTAGAGTCCAGTGAGTCAATAAAGC...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CCA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCCTTGTTTCTTGTGTGTaGTTTTGTCAATTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: VTERRNFPDRSKPNGTMILVSCV*FCQFLL
Trigger: AAGCAGAAATTGACAAAACCACACACAAGAAACAAG...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678224.1
CDS-3UTR TCA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTTTCCTTATTCACCTTTaGGTATTTGTAGGACACGTT +
Preference number: 4 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCFLIHL*VFVGHV
Trigger: AACGTGTCCTACAAATACTCAAAGGTGAATAAGGAA...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS GCA 90 bp GCCTGGGCCTGCGTGGACCCCGGGGCAGCGACGAGCAGCAGCAGCTaGAGCAGGAGCAGAGAGCGCTGCGGGCGGCGGGCGGGCGCGGGC +
Preference number: 5 (lower is better)
Translates to: AWACVDPGAATSSSS*SRSRERCGRRAGAG
Trigger: GCCCGCGCCCGCCCGCCGCCCGCAGCGCTCTCTGCTCCTGCTGCAGCTGCTGCTGCTCGTCGCTGCCCCGGGGTCCACGCAGGCCCAGGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS GCA 90 bp TGCTGCGAGACTTCAGTTGGGTCCCGAGGCCCCCACTCCCCGGGCTaGGCAGGCCTAGGCAGAATTTCCCGACTCAACACTGACGGCAGC +
Preference number: 5 (lower is better)
Translates to: CCETSVGSRGPHSPG*AGLGRISRLNTDGS
Trigger: GCTGCCGTCAGTGTTGAGTCGGGAAATTCTGCCTAGGCCTGCGCAGCCCGGGGAGTGGGGGCCTCGGGACCCAACTGAAGTCTCGCAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS CCA 90 bp GAAGCAGCTCACTGGCTTTCAGTCAAGGTGCTGCGAGACTTCAGTTaGGTCCCGAGGCCCCCACTCCCCGGGCTGCGCAGGCCTAGGCAG +
Preference number: 5 (lower is better)
Translates to: EAAHWLSVKVLRDFS*VPRPPLPGLRRPRQ
Trigger: CTGCCTAGGCCTGCGCAGCCCGGGGAGTGGGGGCCTCGGGACCCAACTGAAGTCTCGCAGCACCTTGACTGAAAGCCAGTGAGCTGCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS GCA 90 bp ACCCTGGGCTGGTTCTTTGCCTGCTTGCTAGGACGTTCGCAGGGGTaGGGTGCTACCAGGGCAGGGGTGCCTGTCTCTCCCAACGCAGAC +
Preference number: 5 (lower is better)
Translates to: TLGWFFACLLGRSQG*GATRAGVPVSPNAD
Trigger: GTCTGCGTTGGGAGAGACAGGCACCCCTGCCCTGGTAGCACCGCACCCCTGCGAACGTCCTAGCAAGCAGGCAAAGAACCAGCCCAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS GCA 90 bp AACACTGCGGAGCCCTTGAAGCAGCTCACTGGCTTTCAGTCAAGGTaGTGCGAGACTTCAGTTGGGTCCCGAGGCCCCCACTCCCCGGGC +
Preference number: 5 (lower is better)
Translates to: NTAEPLKQLTGFQSR*CETSVGSRGPHSPG
Trigger: GCCCGGGGAGTGGGGGCCTCGGGACCCAACTGAAGTCTCGCAGCACCTTGACTGAAAGCCAGTGAGCTGCTTCAAGGGCTCCGCAGTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS GCA 90 bp GGGCTGGTTCTTTGCCTGCTTGCTAGGACGTTCGCAGGGGTGCGGTaGTACCAGGGCAGGGGTGCCTGTCTCTCCCAACGCAGACCTGAT +
Preference number: 5 (lower is better)
Translates to: GLVLCLLARTFAGVR*YQGRGACLSQRRPD
Trigger: ATCAGGTCTGCGTTGGGAGAGACAGGCACCCCTGCCCTGGTAGCACCGCACCCCTGCGAACGTCCTAGCAAGCAGGCAAAGAACCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS CCA 90 bp AGGACAAGCCTGTCCTTGCGCACCAGCTTCAGTCCGTCCCGGGGCTaGCCAACATCAAACGCCTGGTGTCCTCTTACCAGGCAGGCGGCA +
Preference number: 5 (lower is better)
Translates to: RTSLSLRTSFSPSRG*PTSNAWCPLTRQAA
Trigger: TGCCGCCTGCCTGGTAAGAGGACACCAGGCGTTTGATGTTGGCCAGCCCCGGGACGGACTGAAGCTGGTGCGCAAGGACAGGCTTGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCCTCACGATGGTGTCGTaGAGGCCCAGGGGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVLTMVS*RPRGFR
Trigger: CCTGAAGCCCCTGGGCCTCAACGACACCATCGTGAG...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGCATGGGCCTATTGGTaGGCCTGGCCTCAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: EHSVACSQASGVCQEKKRAWAYW*AWPQAC
Trigger: GCAGGCCTGAGGCCAGGCCAACCAATAGGCCCATGC...TCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGATGAGCATGGGCCTATaGGTTGGCCTGGCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: RSLARRPAACARRRRECMMSMGL*VGLASG
Trigger: GCCTGAGGCCAGGCCAACCAATAGGCCCATGCTCAT...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCCGTTCTGACAGCCCCTaGTGCATCTGCCCGTCGTCC +
Preference number: 5 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVRSDSP*CICPSS
Trigger: GGACGACGGGCAGATGCACAAGGGGCTGTCAGAACG...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTTTGGTTGGAGGTGCTaGGCTGTCCCGCGGCTCCGT +
Preference number: 5 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMFGWRC*AVPRLR
Trigger: ACGGAGCCGCGGGACAGCCAAGCACCTCCAACCAAA...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACAAGGACAAGCCTGTCCTaGCGCACCAGCTTCAGTCCG +
Preference number: 5 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTRTSLS*RTSFSP
Trigger: CGGACTGAAGCTGGTGCGCAAGGACAGGCTTGTCCT...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGAGGTCTGTATCCGTCGTaGTCTGAATGGGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGGLYPS*SEWDRQ
Trigger: CTGCCTGTCCCATTCAGACAACGACGGATACAGACC...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp TCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATCAAGGGGACCCATCCTaGTACACCAGCTGCAGGACC +
Preference number: 5 (lower is better)
Translates to: SVACSQASGVCQEKKRVHQGDPS*YTSCRT
Trigger: GGTCCTGCAGCTGGTGTACAAGGATGGGTCCCCTTG...ATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGATGTCGTAGTCCGCAGTaGTGCTACACCACAGCTTCG +
Preference number: 5 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGCRSPQ*CYTTAS
Trigger: CGAAGCTGTGGTGTAGCACAACTGCGGACTACGACA...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCTTCACCTGGCATATGTaGGCTCCAGAGCACGCCGGG +
Preference number: 5 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVFTWHM*APEHAG
Trigger: CCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAA...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS TCA 90 bp GCGGTGCTACCAGGGCAGGGGTGCCTGTCTCTCCCAACGCAGACCTaGTCTCCGGAGGCTTCGAGAGCATGGTTCACATCATGTCCAGCT +
Preference number: 5 (lower is better)
Translates to: AVLPGQGCLSLPTQT*SPEASRAWFTSCPA
Trigger: AGCTGGACATGATGTGAACCATGCTCTCGAAGCCTCCGGAGATCAGGTCTGCGTTGGGAGAGACAGGCACCCCTGCCCTGGTAGCACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS GCA 90 bp ACCAGAATGGGCCCTAGAATTGCTCTGAGCAGTGGTGGGATGCCCTaGAGGGTGCCTGGAGTCACAGCCTGGGGGTCAACAGATGGGGCA +
Preference number: 5 (lower is better)
Translates to: TRMGPRIALSSGGMP*RVPGVTAWGSTDGA
Trigger: TGCCCCATCTGTTGACCCCCAGGCTGTGACTCCAGGCACCCTGCAGGGCATCCCACCACTGCTCAGAGCAATTCTAGGGCCCATTCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS-3UTR CAA 90 bp CCGTCGTCCCCGGGATTCTCGCTGTCAAAGCCCACCCCCAGAGGACACACGGCTGCATACAAACAGCACTaGATGGCCCGCACTGGACAA +
Preference number: 5 (lower is better)
Translates to: PSSPGFSLSKPTPRGHTAAYKQH*MARTGQ
Trigger: TTGTCCAGTGCGGGCCATCAAGTGCTGTTTGTATGC...AGCCGTGTGTCCTCTGGGGGTGGGCTTTGACAGCGAGAATCCCGGGGACGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCAGGACACCCTCGTGCCTaGCCTTCCTGCAGCACTCTG +
Preference number: 5 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPGHPRA*PSCSTL
Trigger: CAGAGTGCTGCAGGAAGGCAAGGCACGAGGGTGTCC...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGCCGATGCATATCGGTaGCAGCCCGGCACTGGATTC +
Preference number: 5 (lower is better)
Translates to: EHSVACSQASGVCQEKKRADAYR*QPGTGF
Trigger: GAATCCAGTGCCGGGCTGCAACCGATATGCATCGGC...TCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCCCGAGGTTCACGGGCTaGGAGCCACCCAGCAGACAC +
Preference number: 5 (lower is better)
Translates to: PVWASLLINGVVSYRPPTPRFTG*EPPSRH
Trigger: GTGTCTGCTGGGTGGCTCCAAGCCCGTGAACCTCGG...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGTGTCCTGTGCTTGGGTaGGTGACCTGGCAGTCATCA +
Preference number: 5 (lower is better)
Translates to: RSLARRPAACARRRRECMCPVLG*VTWQSS
Trigger: TGATGACTGCCAGGTCACCAACCCAAGCACAGGACA...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACAAGCCTCTTGTTGGCCTaGCCCACGCTAATCCTGGTC +
Preference number: 5 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTSLLLA*PTLILV
Trigger: GACCAGGATTAGCGTGGGCAAGGCCAACAAGAGGCT...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGGCATGGGCCTATTGGTaGGCCTGGCCTCAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRAWAYW*AWPQAC
Trigger: GCAGGCCTGAGGCCAGGCCAACCAATAGGCCCATGC...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTATGAGCATGGGCCTATaGGTTGGCCTGGCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: QREPRRQSEASQLSTATAMSMGL*VGLASG
Trigger: GCCTGAGGCCAGGCCAACCAATAGGCCCATGCTCAT...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGGGAACATTCGGTCGCTaGCTCGCAGGCCAGCGGCGT +
Preference number: 5 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRGTFGR*LAGQRR
Trigger: ACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTCC...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGGGCTATCTTGCCGCCTaGCACACAAGCTCACCTGCA +
Preference number: 5 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMGYLAA*HTSSPA
Trigger: TGCAGGTGAGCTTGTGTGCAAGGCGGCAAGATAGCC...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGGACACCCTCGTGCCTaGCCTTCCTGCAGCACTCTG +
Preference number: 5 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQGHPRA*PSCSTL
Trigger: CAGAGTGCTGCAGGAAGGCAAGGCACGAGGGTGTCC...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACGGCCACCTTCAGATTTaGCCAGACTGGAGAGGTCGT +
Preference number: 5 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDGHLQI*PDWRGR
Trigger: ACGACCTCTCCAGTCTGGCAAAATCTGAAGGTGGCC...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGGGTCTGTATCCGTCGTaGTCTGAATGGGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMGLYPS*SEWDRQ
Trigger: CTGCCTGTCCCATTCAGACAACGACGGATACAGACC...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCGCATCAGCGGTACCTTaGGCAGAGAGAGGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPASAVP*AERGPL
Trigger: CAAAGGGCCTCTCTCTGCCAAAGGTACCGCTGATGC...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTTCCATTCGCCGCGGCTaGGGGACTCATCTGCACCAC +
Preference number: 5 (lower is better)
Translates to: APCDPIANRGKTCVPISASIRRG*GTHLHH
Trigger: GTGGTGCAGATGAGTCCCCAAGCCGCGGCGAATGGA...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCCCTTGGACTTGTCACTaGTGGGGCAGACGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: LLKGIALCVSHWVGALCPPWTCH*WGRRLR
Trigger: CCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGG...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTGAGACCACCTTGGACTaGTCACTTGTGGGGCAGACG +
Preference number: 5 (lower is better)
Translates to: QREPRRQSEASQLSTATAETTLD*SLVGQT
Trigger: CGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTC...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCACGTATCTCAGCCTCTaGTTGGCCTTGCCCACGCTA +
Preference number: 5 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSTYLSL*LALPTL
Trigger: TAGCGTGGGCAAGGCCAACAAGAGGCTGAGATACGT...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAGCATGGGCCTATTGGTaGGCCTGGCCTCAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQAWAYW*AWPQAC
Trigger: GCAGGCCTGAGGCCAGGCCAACCAATAGGCCCATGC...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGCCGAGGCTGAAGCTCTaGCCATTTATAGGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: RSLARRPAACARRRRECMPRLKL*PFIGLV
Trigger: CACCAACCCTATAAATGGCAAGAGCTTCAGCCTCGG...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTTTTGGTTGGAGGTGCTaGGCTGTCCCGCGGCTCCGT +
Preference number: 5 (lower is better)
Translates to: APCDPIANRGKTCVPISAFGWRC*AVPRLR
Trigger: ACGGAGCCGCGGGACAGCCAAGCACCTCCAACCAAA...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGTTTGGTTGGAGGTGCTaGGCTGTCCCGCGGCTCCGT +
Preference number: 5 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRFGWRC*AVPRLR
Trigger: ACGGAGCCGCGGGACAGCCAAGCACCTCCAACCAAA...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGACCATCACTTCTTGGTaGTCACCGAGGCCAGCATCC +
Preference number: 5 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMTITSW*SPRPAS
Trigger: GGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGT...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCACCATCACTTCTTGGTaGTCACCGAGGCCAGCATCC +
Preference number: 5 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVTITSW*SPRPAS
Trigger: GGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGT...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS CCA 90 bp CTAAAGCCACCCCAACACGGGACTGGCATGCTCCTCAATGTAGTGTaGCTCAGGCAGCACTTCCTCCTCTCTGAACTGCCTGACCCCTGC +
Preference number: 5 (lower is better)
Translates to: LKPPQHGTGMLLNVV*LRQHFLLSELPDPC
Trigger: GCAGGGGTCAGGCAGTTCAGAGAGGAGGAAGTGCTGCCTGAGCCACACTACATTGAGGAGCATGCCAGTCCCGTGTTGGGGTGGCTTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS-3UTR CAA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGAGGACAAGCCTGTCCTaGCGCACCAGCTTCAGTCCG +
Preference number: 5 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRRTSLS*RTSFSP
Trigger: CGGACTGAAGCTGGTGCGCAAGGACAGGCTTGTCCT...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGGCCACCTTCAGATTTaGCCAGACTGGAGAGGTCGT +
Preference number: 5 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCGHLQI*PDWRGR
Trigger: ACGACCTCTCCAGTCTGGCAAAATCTGAAGGTGGCC...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAGCCGATGCATATCGGTaGCAGCCCGGCACTGGATTC +
Preference number: 5 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTADAYR*QPGTGF
Trigger: GAATCCAGTGCCGGGCTGCAACCGATATGCATCGGC...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCCTTGAGCTCTTCAGTTaGGGTTTCTGCCTCACAGCC +
Preference number: 5 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVLELFS*GFCLTA
Trigger: GGCTGTGAGGCAGAAACCCAAACTGAAGAGCTCAAG...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GTCACCTATGACACCCAGCTTCTGCGTGTGAACGAGTCCCAGGACCTGGACGTCGCATCAGCGGTACCTTaGGCAGAGAGAGGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: VTYDTQLLRVNESQDLDVASAVP*AERGPL
Trigger: CAAAGGGCCTCTCTCTGCCAAAGGTACCGCTGATGC...GACGTCCAGGTCCTGGGACTCGTTCACACGCAGAAGCTGGGTGTCATAGGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTAGCCAGGTCGGTGACTaGGCAGTCCACTGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPSQVGD*AVHWRR
Trigger: CCTTCTCCAGTGGACTGCCAAGTCACCGACCTGGCT...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTCTCACGATGGTGTCGTaGAGGCCCAGGGGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSLTMVS*RPRGFR
Trigger: CCTGAAGCCCCTGGGCCTCAACGACACCATCGTGAG...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGGAGACCACCTTGGACTaGTCACTTGTGGGGCAGACG +
Preference number: 5 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEETTLD*SLVGQT
Trigger: CGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTC...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCATGAGGAGACCACCTaGGACTTGTCACTTGTGGGG +
Preference number: 5 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPHEETT*DLSLVG
Trigger: CCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATG...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCGAGAGGTCGAAGGAGTaGCCAGCCCCATCTTTGAAT +
Preference number: 5 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVERSKE*PAPSLN
Trigger: ATTCAAAGATGGGGCTGGCAACTCCTTCGACCTCTC...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAGGGCCTGGAGTTCACTaGGCTCTCGCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTGPGVH*ALAAGE
Trigger: TTCACCTGCAGCGAGAGCCAAGTGAACTCCAGGCCC...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTTGTCCTGTGCTTGGGTaGGTGACCTGGCAGTCATCA +
Preference number: 5 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPCPVLG*VTWQSS
Trigger: TGATGACTGCCAGGTCACCAACCCAAGCACAGGACA...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCAAGGGGACCCATCCTaGTACACCAGCTGCAGGACC +
Preference number: 5 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRQGDPS*YTSCRT
Trigger: GGTCCTGCAGCTGGTGTACAAGGATGGGTCCCCTTG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTCCATCAATAGGAACTTaGCACACAGCGGCTCCGGCA +
Preference number: 5 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCPSIGT*HTAAPA
Trigger: TGCCGGAGCCGCTGTGTGCAAAGTTCCTATTGATGG...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTGTCCTTACAGCCTCCTaGTTCTGGCCCGACTGCAAA +
Preference number: 5 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPVLTAS*FWPDCK
Trigger: TTTGCAGTCGGGCCAGAACAAGGAGGCTGTAAGGAC...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTATGTCCGGTAGCTGTTaGAGTGTCTGCAGAAGCCCC +
Preference number: 5 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCMSGSC*SVCRSP
Trigger: GGGGCTTCTGCAGACACTCAAACAGCTACCGGACAT...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCCTGGACGTCACCAGTaGTGGTCCTTCTGCAAATGC +
Preference number: 5 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPPGRHQ*WSFCKC
Trigger: GCATTTGCAGAAGGACCACAACTGGTGACGTCCAGG...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTTGGAAGGACACCAGCTaGGTGGAGCTCACTGTCTTC +
Preference number: 5 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPWKDTS*VELTVF
Trigger: GAAGACAGTGAGCTCCACCAAGCTGGTGTCCTTCCA...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCGGAAGTCTTATTTGGTaGGAGGTGCTTGGCTGTCCC +
Preference number: 5 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSGSLIW*EVLGCP
Trigger: GGGACAGCCAAGCACCTCCAACCAAATAAGACTTCC...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGGGAAGTCTTATTTGGTaGGAGGTGCTTGGCTGTCCC +
Preference number: 5 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMGSLIW*EVLGCP
Trigger: GGGACAGCCAAGCACCTCCAACCAAATAAGACTTCC...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCATGCAGCCCTCTGTTTaGAGATGCGTCCGGCCTTAT +
Preference number: 5 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVMQPSV*RCVRPY
Trigger: ATAAGGCCGGACGCATCTCAAAACAGAGGGCTGCAT...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTACCATCACTTCTTGGTaGTCACCGAGGCCAGCATCC +
Preference number: 5 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPTITSW*SPRPAS
Trigger: GGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGT...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS CCA 90 bp GCTTCCAGAGACGGCGCTGCAGGAAGGCGTCTCAGCACCCAAAGGTaGGAGGATAGTGTAGGAACAGGTCAGAAGTGTCCGTTCAATGGC +
Preference number: 5 (lower is better)
Translates to: ASRDGAAGRRLSTQR*EDSVGTGQKCPFNG
Trigger: GCCATTGAACGGACACTTCTGACCTGTTCCTACACTATCCTCCCACCTTTGGGTGCTGAGACGCCTTCCTGCAGCGCCGTCTCTGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475584.1
CDS CCA 90 bp TCTTGTAACAGTGTCTCAGCACTGTATCTGGAGGTCTTCCCTGCCTaGAGCAGCCCCGCCCAATACAGCACAATCAGCGGCTCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: SCNSVSALYLEVFPA*SSPAQYSTISGSGP
Trigger: AGGGCCAGAGCCGCTGATTGTGCTGTATTGGGCGGGGCTGCTCCAGGCAGGGAAGACCTCCAGATACAGTGCTGAGACACTGTTACAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS CCA 90 bp GATGCCCTGCAGGGTGCCTGGAGTCACAGCCTGGGGGTCAACAGATaGGGCAGGTCTCTGATGATGACGGAATCCCATCATCTCTCTACA +
Preference number: 5 (lower is better)
Translates to: DALQGAWSHSLGVNR*GRSLMMTESHHLST
Trigger: TGTAGAGAGATGATGGGATTCCGTCATCATCAGAGACCTGCCCCATCTGTTGACCCCCAGGCTGTGACTCCAGGCACCCTGCAGGGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS CCA 90 bp TGTGAACAAGGGCATCCCAGGGGCAGGTGCCACAACAGCAGTTACTaGGGCATTTTGGGCTTGAAAGCCTTCCCAGTGGCAAGACCCTGG +
Preference number: 5 (lower is better)
Translates to: CEQGHPRGRCHNSSY*GILGLKAFPVARPW
Trigger: CCAGGGTCTTGCCACTGGGAAGGCTTTCAAGCCCAAAATGCCCCAGTAACTGCTGTTGTGGCACCTGCCCCTGGGATGCCCTTGTTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS-3UTR CAA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACATCTGTGATTTGTGCCTaGCTGGTCACAGCTCACTGT +
Preference number: 5 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTSVICA*LVTAHC
Trigger: ACAGTGAGCTGTGACCAGCAAGGCACAAATCACAGA...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTCGCTGGTTCCCACACTaGTCACCGTTGACATACATG +
Preference number: 5 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPRWFPH*SPLTYM
Trigger: CATGTATGTCAACGGTGACAAGTGTGGGAACCAGCG...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACAACAAGTTGCCATGCCTaGGGTCTTTCACCTCACAGT +
Preference number: 5 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTTSCHA*GLSPHS
Trigger: ACTGTGAGGTGAAAGACCCAAGGCATGGCAACTTGT...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACACCTTGGACTTGTCACTaGTGGGGCAGACGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTPWTCH*WGRRLR
Trigger: CCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGG...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCGTGATGGCTTCCCAGTaGTCACTGTACCTTGACAGG +
Preference number: 5 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPVMASQ*SLYLDR
Trigger: CCTGTCAAGGTACAGTGACAACTGGGAAGCCATCAC...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTCAGTCATCATGCTCGTaGCTCTTCATGGGACAGGCT +
Preference number: 5 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPQSSCS*LFMGQA
Trigger: AGCCTGTCCCATGAAGAGCAACGAGCATGATGACTG...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCGGAACATTCGGTCGCTaGCTCGCAGGCCAGCGGCGT +
Preference number: 5 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTGTFGR*LAGQRR
Trigger: ACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTCC...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGCCAAAGGATGCCCCCTaGGTGCCTGAGAGCAGACAG +
Preference number: 5 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLPKDAP*VPESRQ
Trigger: CTGTCTGCTCTCAGGCACCAAGGGGGCATCCTTTGG...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCGTCGTCCCCGGGATTCTCGCTGTCAAAGCCCACCCCCAGAGGACACACGGCTTGTAATCCAGTTTCATaGATTGCAGCCGTCCAAAGG +
Preference number: 5 (lower is better)
Translates to: PSSPGFSLSKPTPRGHTACNPVS*IAAVQR
Trigger: CCTTTGGACGGCTGCAATCAATGAAACTGGATTACA...AGCCGTGTGTCCTCTGGGGGTGGGCTTTGACAGCGAGAATCCCGGGGACGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCATGTCGTAGTCCGCAGTaGTGCTACACCACAGCTTCG +
Preference number: 5 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPCRSPQ*CYTTAS
Trigger: CGAAGCTGTGGTGTAGCACAACTGCGGACTACGACA...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTCACTTCACTGAAGACTaGTGGCCTCCCAATGTCCTC +
Preference number: 5 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCHFTED*WPPNVL
Trigger: GAGGACATTGGGAGGCCACAAGTCTTCAGTGAAGTG...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCCACTTCACTGAAGACTaGTGGCCTCCCAATGTCCTC +
Preference number: 5 (lower is better)
Translates to: LLKGIALCVSHWVGALCPHFTED*WPPNVL
Trigger: GAGGACATTGGGAGGCCACAAGTCTTCAGTGAAGTG...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGCCTGGACGTCACCAGTaGTGGTCCTTCTGCAAATGC +
Preference number: 5 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEPGRHQ*WSFCKC
Trigger: GCATTTGCAGAAGGACCACAACTGGTGACGTCCAGG...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAATTCACCTGGCATATGTaGGCTCCAGAGCACGCCGGG +
Preference number: 5 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQFTWHM*APEHAG
Trigger: CCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAA...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCCTTTGGGCAGGTTGTTaGAATTCACCAGCCGGCAAA +
Preference number: 5 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSLWAGC*NSPAGK
Trigger: TTTGCCGGCTGGTGAATTCAAACAACCTGCCCAAAG...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCCCAAGGGAAGGCAGATaGGACCCAAAGTTAACACCT +
Preference number: 5 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVPREGR*DPKLTP
Trigger: AGGTGTTAACTTTGGGTCCAATCTGCCTTCCCTTGG...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATGGTCAGAACCTCATCCTCACCACGACTGCCCGTaGACCCCATTCTCACAGAAC +
Preference number: 5 (lower is better)
Translates to: QLPCPSELSPLGWSEPHPHHDCP*TPFSQN
Trigger: GTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTG...AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCACAACCTCCCATCTGGTaGCTGAAGCGTCTCCATCTC +
Preference number: 5 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPQPPIW*LKRLHL
Trigger: GAGATGGAGACGCTTCAGCAACCAGATGGGAGGTTG...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAACCCACCATCACTTCTaGGTTGTCACCGAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTTHHHF*VVTEAS
Trigger: GCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGT...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTACCCACCATCACTTCTaGGTTGTCACCGAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPTHHHF*VVTEAS
Trigger: GCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGT...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp ACTGCCTGGCTCCGTTCTGACAGCCCCTTGTGCATCTGCCCGTCGTCCCCGGGAAGTTCAAGTATGATTTaGCAGTTAGACCCAAGGGCC +
Preference number: 5 (lower is better)
Translates to: TAWLRSDSPLCICPSSPGSSSMI*QLDPRA
Trigger: GGCCCTTGGGTCTAACTGCAAAATCATACTTGAACT...TCCCGGGGACGACGGGCAGATGCACAAGGGGCTGTCAGAACGGAGCCAGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS TCA 90 bp TTGGCTAATGACAGGATACGGAGCAGGGGCTGGCCATGCAGTACCTaGGTGATCAATGGACCAATCCTGCCCATGTCAGAGCCCCGGGAA +
Preference number: 5 (lower is better)
Translates to: LANDRIRSRGWPCST*VINGPILPMSEPRE
Trigger: TTCCCGGGGCTCTGACATGGGCAGGATTGGTCCATTGATCACTCAGGTACTGCATGGCCAGCCCCTGCTCCGTATCCTGTCATTAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569097.2
CDS TCA 90 bp CTCCCCGGGCTGCGCAGGCCTAGGCAGAATTTCCCGACTCAACACTaGCGGCAGCTCGGAGCGAGGGTGGTTATTTTACTCACTTCTTTT +
Preference number: 5 (lower is better)
Translates to: LPGLRRPRQNFPTQH*RQLGARVVILLTSF
Trigger: AAAAGAAGTGAGTAAAATAACCACCCTCGCTCCGAGCTGCCGTCAGTGTTGAGTCGGGAAATTCTGCCTAGGCCTGCGCAGCCCGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS TCA 90 bp TACGCACAGAGATATCTAGGCACTTTTTGCCACCTGGCAGGCTCCTaGGTCTGGCTGACAGGGGCTCACAGACACCGGGCCACACACATT +
Preference number: 5 (lower is better)
Translates to: YAQRYLGTFCHLAGS*VWLTGAHRHRATHI
Trigger: AATGTGTGTGGCCCGGTGTCTGTGAGCCCCTGTCAGCCAGACTCAGGAGCCTGCCAGGTGGCAAAAAGTGCCTAGATATCTCTGTGCGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS CCA 90 bp CACGTGGGTGCTGGGAACACAACACATCTGATTCCACGGGAGAGCTaGTGGGAACTCTGCATTCAATTCCCTCCTGGACTCTGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: HVGAGNTTHLIPRES*WELCIQFPPGLCPV
Trigger: CACAGGGCAGAGTCCAGGAGGGAATTGAATGCAGAGTTCCCACCAGCTCTCCCGTGGAATCAGATGTGTTGTGTTCCCAGCACCCACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569097.2
CDS CCA 90 bp CCCAGCTGCTCGAGGGTCCCAGCCAGGCTGCTTGAACACCTCGGGTaGGACAAATCCACGCCCCTTTGTTTCTACTATGACATTCAAAGG +
Preference number: 5 (lower is better)
Translates to: PSCSRVPARLLEHLG*DKSTPLCFYYDIQR
Trigger: CCTTTGAATGTCATAGTAGAAACAAAGGGGCGTGGATTTGTCCCACCCGAGGTGTTCAAGCAGCCTGGCTGGGACCCTCGAGCAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS-3UTR CAA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCACTTGAGCTCTTCAGTTaGGGTTTCTGCCTCACAGCC +
Preference number: 5 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPLELFS*GFCLTA
Trigger: GGCTGTGAGGCAGAAACCCAAACTGAAGAGCTCAAG...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCGCTGGCTTCCAATTCTaGAGCTCTTCAGTTTGGGTT +
Preference number: 5 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVAGFQF*SSSVWV
Trigger: AACCCAAACTGAAGAGCTCAAGAATTGGAAGCCAGC...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAGCATCAGCGGTACCTTaGGCAGAGAGAGGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQASAVP*AERGPL
Trigger: CAAAGGGCCTCTCTCTGCCAAAGGTACCGCTGATGC...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCCCCAGATTCCAGCTATaGCCTTCTGACACTAAGCAA +
Preference number: 5 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVPRFQL*PSDTKQ
Trigger: TTGCTTAGTGTCAGAAGGCAATAGCTGGAATCTGGG...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp TCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATCCCAGATTCCAGCTATaGCCTTCTGACACTAAGCAA +
Preference number: 5 (lower is better)
Translates to: SVACSQASGVCQEKKRVHPRFQL*PSDTKQ
Trigger: TTGCTTAGTGTCAGAAGGCAATAGCTGGAATCTGGG...ATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTACAAGTTGCCATGCCTaGGGTCTTTCACCTCACAGT +
Preference number: 5 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCTSCHA*GLSPHS
Trigger: ACTGTGAGGTGAAAGACCCAAGGCATGGCAACTTGT...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGGAGACCACCTTGGACTaGTCACTTGTGGGGCAGACG +
Preference number: 5 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLETTLD*SLVGQT
Trigger: CGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTC...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCACAGTCATCATGCTCGTaGCTCTTCATGGGACAGGCT +
Preference number: 5 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPQSSCS*LFMGQA
Trigger: AGCCTGTCCCATGAAGAGCAACGAGCATGATGACTG...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGTCCTGTGCTTGGGTaGGTGACCTGGCAGTCATCA +
Preference number: 5 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPCPVLG*VTWQSS
Trigger: TGATGACTGCCAGGTCACCAACCCAAGCACAGGACA...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTACGTATCTCAGCCTCTaGTTGGCCTTGCCCACGCTA +
Preference number: 5 (lower is better)
Translates to: APCDPIANRGKTCVPISATYLSL*LALPTL
Trigger: TAGCGTGGGCAAGGCCAACAAGAGGCTGAGATACGT...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACATGCACTCCAACTTCTTaGGAGGGCAGACAACTTTTG +
Preference number: 5 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTCTPTS*EGRQLL
Trigger: CAAAAGTTGTCTGCCCTCCAAAGAAGTTGGAGTGCA...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCCTGGACGTCACCAGTaGTGGTCCTTCTGCAAATGC +
Preference number: 5 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRPGRHQ*WSFCKC
Trigger: GCATTTGCAGAAGGACCACAACTGGTGACGTCCAGG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTTCGATATCAAACCTCTaGAATGCAGGTCTGCCCACC +
Preference number: 5 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPSISNL*NAGLPT
Trigger: GGTGGGCAGACCTGCATTCAAGAGGTTTGATATCGA...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACATTGCCATTTATAGGGTaGGTGATGGTCCCATTCACC +
Preference number: 5 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTLPFIG*VMVPFT
Trigger: GGTGAATGGGACCATCACCAACCCTATAAATGGCAA...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCACCGAGGCTGAAGCTCTaGCCATTTATAGGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPPRLKL*PFIGLV
Trigger: CACCAACCCTATAAATGGCAAGAGCTTCAGCCTCGG...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGATTCACCTGGCATATGTaGGCTCCAGAGCACGCCGGG +
Preference number: 5 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERFTWHM*APEHAG
Trigger: CCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAA...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACACGTTCTGACAGCCCCTaGTGCATCTGCCCGTCGTCC +
Preference number: 5 (lower is better)
Translates to: PEVEEVEEGADASGVTFTRSDSP*CICPSS
Trigger: GGACGACGGGCAGATGCACAAGGGGCTGTCAGAACG...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCCGTTCTGACAGCCCCTaGTGCATCTGCCCGTCGTCC +
Preference number: 5 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTRSDSP*CICPSS
Trigger: GGACGACGGGCAGATGCACAAGGGGCTGTCAGAACG...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTTGGAAGGACACCAGCTaGGTGGAGCTCACTGTCTTC +
Preference number: 5 (lower is better)
Translates to: APCDPIANRGKTCVPISAWKDTS*VELTVF
Trigger: GAAGACAGTGAGCTCCACCAAGCTGGTGTCCTTCCA...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTGAGTGGAAGTCTTATTaGGTTGGAGGTGCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPEWKSY*VGGAWL
Trigger: CAGCCAAGCACCTCCAACCAAATAAGACTTCCACTC...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCAATGCAGCCCTCTGTTTaGAGATGCGTCCGGCCTTAT +
Preference number: 5 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPMQPSV*RCVRPY
Trigger: ATAAGGCCGGACGCATCTCAAAACAGAGGGCTGCAT...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTCCAAGGGAAGGCAGATaGGACCCAAAGTTAACACCT +
Preference number: 5 (lower is better)
Translates to: QREPRRQSEASQLSTATAPREGR*DPKLTP
Trigger: AGGTGTTAACTTTGGGTCCAATCTGCCTTCCCTTGG...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGAGACAACATGCCTTTTaGCCATCCAGCTTACCAAGG +
Preference number: 5 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMRQHAF*PSSLPR
Trigger: CCTTGGTAAGCTGGATGGCAAAAAGGCATGTTGTCT...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGCTCAATGTGGCTATCTaGCCGCCTTGCACACAAGCT +
Preference number: 5 (lower is better)
Translates to: LINGVVSYRPPTQHAPWELNVAI*PPCTQA
Trigger: AGCTTGTGTGCAAGGCGGCAAGATAGCCACATTGAG...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCACTCAATGTGGCTATCTaGCCGCCTTGCACACAAGCT +
Preference number: 5 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPLNVAI*PPCTQA
Trigger: AGCTTGTGTGCAAGGCGGCAAGATAGCCACATTGAG...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACAGTCACAAGTCCTTTCTaGAACCTGACTTCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTVTSPF*NLTSCF
Trigger: GAAGCAGGAAGTCAGGTTCAAGAAAGGACTTGTGAC...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS TCA 90 bp CAAGTTCCAAGTCTTCTCATCACTTTTTGCCACCTGGCAGGCTCCTaGGTCTGGCTGACAGGGGCTCACAGACACCGGGCCACACACATT +
Preference number: 5 (lower is better)
Translates to: QVPSLLITFCHLAGS*VWLTGAHRHRATHI
Trigger: AATGTGTGTGGCCCGGTGTCTGTGAGCCCCTGTCAGCCAGACTCAGGAGCCTGCCAGGTGGCAAAAAGTGATGAGAAGACTTGGAACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356956.6
ENST00000677704.1
CDS TCA 90 bp CTCCATGTGCACTGCCACACGTGGGTGCTGGGAACACAACACATCTaGTTCCACGGGAGAGCTGGTGGGAACTCTGCATTCAATTCCCTC +
Preference number: 5 (lower is better)
Translates to: LHVHCHTWVLGTQHI*FHGRAGGNSAFNSL
Trigger: GAGGGAATTGAATGCAGAGTTCCCACCAGCTCTCCCGTGGAATCAGATGTGTTGTGTTCCCAGCACCCACGTGTGGCAGTGCACATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569097.2
CDS-3UTR CAA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCGCATACAAACAGCACTaGATGGCCCGCACTGGACAA +
Preference number: 5 (lower is better)
Translates to: PVWASLLINGVVSYRPPTAYKQH*MARTGQ
Trigger: TTGTCCAGTGCGGGCCATCAAGTGCTGTTTGTATGC...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACAGCTTGATCAGAGGATaGAGATCATGCTTCCTCAAC +
Preference number: 5 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDSLIRG*RSCFLN
Trigger: GTTGAGGAAGCATGATCTCAATCCTCTGATCAAGCT...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTGGCCACCTTCAGATTTaGCCAGACTGGAGAGGTCGT +
Preference number: 5 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPGHLQI*PDWRGR
Trigger: ACGACCTCTCCAGTCTGGCAAAATCTGAAGGTGGCC...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAACATGTTCCCCTGAGTaGTCCATGGCATACCAGTTT +
Preference number: 5 (lower is better)
Translates to: EHSVACSQASGVCQEKKRTCSPE*SMAYQF
Trigger: AAACTGGTATGCCATGGACAACTCAGGGGAACATGT...TCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCACATGTTCCCCTGAGTaGTCCATGGCATACCAGTTT +
Preference number: 5 (lower is better)
Translates to: LLKGIALCVSHWVGALCPTCSPE*SMAYQF
Trigger: AAACTGGTATGCCATGGACAACTCAGGGGAACATGT...GGGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GCTGATCGTTGGGCTTCACCTGGCATATGTTGGCTCCAGAGCACGCCGGGTTTCCCCAGAGTCGATATCTaGATGCAGGAATTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: ADRWASPGICWLQSTPGFPRVDI*MQEFEG
Trigger: CCCCTCAAATTCCTGCATCAAGATATCGACTCTGGG...GAAACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCAGCCAGGTCGGTGACTaGGCAGTCCACTGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTSQVGD*AVHWRR
Trigger: CCTTCTCCAGTGGACTGCCAAGTCACCGACCTGGCT...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCTCCATTCGCCGCGGCTaGGGGACTCATCTGCACCAC +
Preference number: 5 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLSIRRG*GTHLHH
Trigger: GTGGTGCAGATGAGTCCCCAAGCCGCGGCGAATGGA...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCGGAACATTCGGTCGCTaGCTCGCAGGCCAGCGGCGT +
Preference number: 5 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALGTFGR*LAGQRR
Trigger: ACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTCC...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGCCATCAATAGGAACTTaGCACACAGCGGCTCCGGCA +
Preference number: 5 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLPSIGT*HTAAPA
Trigger: TGCCGGAGCCGCTGTGTGCAAAGTTCCTATTGATGG...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAGTCCTTACAGCCTCCTaGTTCTGGCCCGACTGCAAA +
Preference number: 5 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQVLTAS*FWPDCK
Trigger: TTTGCAGTCGGGCCAGAACAAGGAGGCTGTAAGGAC...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACACCAAAGGATGCCCCCTaGGTGCCTGAGAGCAGACAG +
Preference number: 5 (lower is better)
Translates to: PEVEEVEEGADASGVTFTPKDAP*VPESRQ
Trigger: CTGTCTGCTCTCAGGCACCAAGGGGGCATCCTTTGG...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp TCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATTGTAATCCAGTTTCATaGATTGCAGCCGTCCAAAGG +
Preference number: 5 (lower is better)
Translates to: SVACSQASGVCQEKKRVHCNPVS*IAAVQR
Trigger: CCTTTGGACGGCTGCAATCAATGAAACTGGATTACA...ATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTTGCACTCCAACTTCTTaGGAGGGCAGACAACTTTTG +
Preference number: 5 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPCTPTS*EGRQLL
Trigger: CAAAAGTTGTCTGCCCTCCAAAGAAGTTGGAGTGCA...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCATCGATATCAAACCTCTaGAATGCAGGTCTGCCCACC +
Preference number: 5 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPSISNL*NAGLPT
Trigger: GGTGGGCAGACCTGCATTCAAGAGGTTTGATATCGA...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAATGGAAGGACACCAGCTaGGTGGAGCTCACTGTCTTC +
Preference number: 5 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQWKDTS*VELTVF
Trigger: GAAGACAGTGAGCTCCACCAAGCTGGTGTCCTTCCA...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGGAGTGGAAGTCTTATTaGGTTGGAGGTGCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEEWKSY*VGGAWL
Trigger: CAGCCAAGCACCTCCAACCAAATAAGACTTCCACTC...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTATGCAGCCCTCTGTTTaGAGATGCGTCCGGCCTTAT +
Preference number: 5 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLMQPSV*RCVRPY
Trigger: ATAAGGCCGGACGCATCTCAAAACAGAGGGCTGCAT...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACATCTGTACGCCCAGGCTaGAAGATATCATGCAAAAAG +
Preference number: 5 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTSVRPG*KISCKK
Trigger: CTTTTTGCATGATATCTTCAAGCCTGGGCGTACAGA...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GTCGGCAGTCTCGTGACTGAACTCGGGGATCCCGTCCTCCACCAGAGGGTCACATCCATGTTCATTGTTTaGATGAACAGGACCACACCC +
Preference number: 5 (lower is better)
Translates to: VGSLVTELGDPVLHQRVTSMFIV*MNRTTP
Trigger: GGGTGTGGTCCTGTTCATCAAAACAATGAACATGGA...TGTGACCCTCTGGTGGAGGACGGGATCCCCGAGTTCAGTCACGAGACTGCCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCTCCATGTTCATTGTTTaGATGAACAGGACCACACCC +
Preference number: 5 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSSMFIV*MNRTTP
Trigger: GGGTGTGGTCCTGTTCATCAAAACAATGAACATGGA...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTAGACAACATGCCTTTTaGCCATCCAGCTTACCAAGG +
Preference number: 5 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCRQHAF*PSSLPR
Trigger: CCTTGGTAAGCTGGATGGCAAAAAGGCATGTTGTCT...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCACAAGTCCTTTCTaGAACCTGACTTCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCVTSPF*NLTSCF
Trigger: GAAGCAGGAAGTCAGGTTCAAGAAAGGACTTGTGAC...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGAGTTCAAGTATGATTTaGCAGTTAGACCCAAGGGCC +
Preference number: 5 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMSSSMI*QLDPRA
Trigger: GGCCCTTGGGTCTAACTGCAAAATCATACTTGAACT...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAGTGCATGGATGCTGAGCATTTTTaGATATACCTGTTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: RSLARRPAACARRRRECMDAEHF*IYLFGP
Trigger: AGGCCCAAACAGGTATATCAAAAAATGCTCAGCATC...CATGCACTCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS CCA 90 bp GGCAAGAATTTAACCTTGCCCAAAAAGAGGGCTGGCCTTGCTCCTTaGCTAATGACAGGATACGGAGCAGGGGCTGGCCATGCAGTACCT +
Preference number: 5 (lower is better)
Translates to: GKNLTLPKKRAGLAP*LMTGYGAGAGHAVP
Trigger: AGGTACTGCATGGCCAGCCCCTGCTCCGTATCCTGTCATTAGCCAAGGAGCAAGGCCAGCCCTCTTTTTGGGCAAGGTTAAATTCTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569097.2
CDS CCA 90 bp CAGAGAAGTTGCACTGGTCTTGTAACAGTGTCTCAGCACTGTATCTaGAGGTCTTCCCTGCCTGGAGCAGCCCCGCCCAATACAGCACAA +
Preference number: 5 (lower is better)
Translates to: QRSCTGLVTVSQHCI*RSSLPGAAPPNTAQ
Trigger: TTGTGCTGTATTGGGCGGGGCTGCTCCAGGCAGGGAAGACCTCCAGATACAGTGCTGAGACACTGTTACAAGACCAGTGCAACTTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS CCA 90 bp GGAATCAGTTCTGTTCACAAACAGCAGCTCACATGCACCCTCTGTTaGCCAAGCTCTCCCTGGCACCAGATGCAATGTGGCCGGGAAAAC +
Preference number: 5 (lower is better)
Translates to: GISSVHKQQLTCTLC*PSSPWHQMQCGREN
Trigger: GTTTTCCCGGCCACATTGCATCTGGTGCCAGGGAGAGCTTGGCCAACAGAGGGTGCATGTGAGCTGCTGTTTGTGAACAGAACTGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS CCA 90 bp AGACTGCAAAACAATGAACACTGCGGAGCCCTTGAAGCAGCTCACTaGCTTTCAGTCAAGGTGCTGCGAGACTTCAGTTGGGTCCCGAGG +
Preference number: 5 (lower is better)
Translates to: RLQNNEHCGALEAAH*LSVKVLRDFSWVPR
Trigger: CCTCGGGACCCAACTGAAGTCTCGCAGCACCTTGACTGAAAGCCAGTGAGCTGCTTCAAGGGCTCCGCAGTGTTCATTGTTTTGCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS-3UTR CAA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAATCTTCTCATCACTTTTaGCCACCTGGCAGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQSSHHF*PPGRLL
Trigger: CAGGAGCCTGCCAGGTGGCAAAAAGTGATGAGAAGA...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356956.6
ENST00000677704.1
CDS-3UTR CAA 90 bp CAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATGGTCAGAACCTCATCCTTCTTTCACCTCACAGTaGTCCCCTTCCACTCTGACA +
Preference number: 5 (lower is better)
Translates to: QLPCPSELSPLGWSEPHPSFTSQ*SPSTLT
Trigger: TGTCAGAGTGGAAGGGGACAACTGTGAGGTGAAAGA...AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACATCTTTCACCTCACAGTaGTCCCCTTCCACTCTGACA +
Preference number: 5 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTSFTSQ*SPSTLT
Trigger: TGTCAGAGTGGAAGGGGACAACTGTGAGGTGAAAGA...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGGTGATGGCTTCCCAGTaGTCACTGTACCTTGACAGG +
Preference number: 5 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLVMASQ*SLYLDR
Trigger: CCTGTCAAGGTACAGTGACAACTGGGAAGCCATCAC...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCCCGAGGTTCACGGGCTaGGAGCCACCCAGCAGACAC +
Preference number: 5 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTPRFTG*EPPSRH
Trigger: GTGTCTGCTGGGTGGCTCCAAGCCCGTGAACCTCGG...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCGGGCCTGGAGTTCACTaGGCTCTCGCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLGPGVH*ALAAGE
Trigger: TTCACCTGCAGCGAGAGCCAAGTGAACTCCAGGCCC...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTCATTTGCTATTGGATaGAGTATTGGTGGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMSFAIG*SIGGPA
Trigger: AGCAGGACCACCAATACTCAATCCAATAGCAAATGA...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGATGTCGTAGTCCGCAGTaGTGCTACACCACAGCTTCG +
Preference number: 5 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERCRSPQ*CYTTAS
Trigger: CGAAGCTGTGGTGTAGCACAACTGCGGACTACGACA...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGGTCTGCCCACCGTCTTaGTACAGGTCAATTCTATCA +
Preference number: 5 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLVCPPS*YRSILS
Trigger: TGATAGAATTGACCTGTACAAAGACGGTGGGCAGAC...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGATCGAGATCGCCGTCTaGAAGGTAGTACTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLIEIAV*KVVLGL
Trigger: AAGACCAAGTACTACCTTCAAGACGGCGATCTCGAT...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCAGGGCTTTCACTGACTaGGTGGTAATATGGCCGTTC +
Preference number: 5 (lower is better)
Translates to: PVWASLLINGVVSYRPPTRAFTD*VVIWPF
Trigger: GAACGGCCATATTACCACCAAGTCAGTGAAAGCCCT...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGATGGAAGGACACCAGCTaGGTGGAGCTCACTGTCTTC +
Preference number: 5 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERWKDTS*VELTVF
Trigger: GAAGACAGTGAGCTCCACCAAGCTGGTGTCCTTCCA...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTGGAAGTCTTATTTGGTaGGAGGTGCTTGGCTGTCCC +
Preference number: 5 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPGSLIW*EVLGCP
Trigger: GGGACAGCCAAGCACCTCCAACCAAATAAGACTTCC...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTTCTGTACGCCCAGGCTaGAAGATATCATGCAAAAAG +
Preference number: 5 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCSVRPG*KISCKK
Trigger: CTTTTTGCATGATATCTTCAAGCCTGGGCGTACAGA...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCATGCTGCAGGGCGGTTaGCTTCTCAGCAATAGAACA +
Preference number: 5 (lower is better)
Translates to: PVWASLLINGVVSYRPPTMLQGG*LLSNRT
Trigger: TGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCAT...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAATGCACTCAAACGTGTaGTCACTTCTCCTTCCCCAC +
Preference number: 5 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTMHSNV*SLLLPH
Trigger: GTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCAT...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTGAGTCCAATTCTGATTaGCTGTCACGGGATGTTTTC +
Preference number: 5 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPESNSD*LSRDVF
Trigger: GAAAACATCCCGTGACAGCAAATCAGAATTGGACTC...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTCTCAATGTGGCTATCTaGCCGCCTTGCACACAAGCT +
Preference number: 5 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSLNVAI*PPCTQA
Trigger: AGCTTGTGTGCAAGGCGGCAAGATAGCCACATTGAG...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGAACCCCATTCACTAGATaGTGTTTCCCTCAAACACTG +
Preference number: 5 (lower is better)
Translates to: EHSVACSQASGVCQEKKRTPFTR*CFPQTL
Trigger: CAGTGTTTGAGGGAAACACAATCTAGTGAATGGGGT...TCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCGATGCTGAGCATTTTTaGATATACCTGTTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVDAEHF*IYLFGP
Trigger: AGGCCCAAACAGGTATATCAAAAAATGCTCAGCATC...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp TGCCTCACAGCCAGAAGCAGGTTTTCCCAGGATGGTCCCACAGACAGGCATTGTATATCTAGGCACTTTTaGCCACCTGGCAGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: CLTARSRFSQDGPTDRHCISRHF*PPGRLL
Trigger: CAGGAGCCTGCCAGGTGGCAAAAAGTGCCTAGATAT...ACAATGCCTGTCTGTGGGACCATCCTGGGAAAACCTGCTTCTGGCTGTGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS CCA 90 bp ATGCACCCTCTGTTGGCCAAGCTCTCCCTGGCACCAGATGCAATGTaGCCGGGAAAACTTGAATATAATCCAAGCACATCCCAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: MHPLLAKLSLAPDAM*PGKLEYNPSTSQVQ
Trigger: CTGGACCTGGGATGTGCTTGGATTATATTCAAGTTTTCCCGGCCACATTGCATCTGGTGCCAGGGAGAGCTTGGCCAACAGAGGGTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS-3UTR CAA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAATCTGTGATTTGTGCCTaGCTGGTCACAGCTCACTGT +
Preference number: 5 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQSVICA*LVTAHC
Trigger: ACAGTGAGCTGTGACCAGCAAGGCACAAATCACAGA...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGTTAAATATGTCTTTCTaGCAGGCTGCAGTGGTCCTC +
Preference number: 5 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLLNMSF*QAAVVL
Trigger: GAGGACCACTGCAGCCTGCAAGAAAGACATATTTAA...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTGATTTAGCTGTGAGTTaGGGAATGGTGCCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSDLAVS*GMVPSL
Trigger: GAGAGAGGGCACCATTCCCAAACTCACAGCTAAATC...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGTCCTGCTGCTTTGACTaGAGAGGTATCGCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: LINGVVSYRPPTQHAPWESCCFD*RGIALF
Trigger: AAAAAGAGCGATACCTCTCAAGTCAAAGCAGCAGGA...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGAGTGTTTCGGATCCCTaGCCCAGAGTCGATATCTTG +
Preference number: 5 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLSVSDP*PRVDIL
Trigger: CAAGATATCGACTCTGGGCAAGGGATCCGAAACACT...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGTCTTTCACCTCACAGTaGTCCCCTTCCACTCTGACA +
Preference number: 5 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLSFTSQ*SPSTLT
Trigger: TGTCAGAGTGGAAGGGGACAACTGTGAGGTGAAAGA...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTACAAGTTGCCATGCCTaGGGTCTTTCACCTCACAGT +
Preference number: 5 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSTSCHA*GLSPHS
Trigger: ACTGTGAGGTGAAAGACCCAAGGCATGGCAACTTGT...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCTTCAGGTCATACAAGTaGCCATGCCTTGGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: PVWASLLINGVVSYRPPTFRSYK*PCLGSF
Trigger: GAAAGACCCAAGGCATGGCAACTTGTATGACCTGAA...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAACGTATCTCAGCCTCTaGTTGGCCTTGCCCACGCTA +
Preference number: 5 (lower is better)
Translates to: PEVEEVEEGADASGVTFTTYLSL*LALPTL
Trigger: TAGCGTGGGCAAGGCCAACAAGAGGCTGAGATACGT...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCCAAGGGGACCCATCCTaGTACACCAGCTGCAGGACC +
Preference number: 5 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALQGDPS*YTSCRT
Trigger: GGTCCTGCAGCTGGTGTACAAGGATGGGTCCCCTTG...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCCCTCCTTACAGAGAGGGCTCCCCATGGTCTTAGCAGGAGGTGGGAATGGCCTGAGGGCAGACAACTTTaGTTTTCCACTCAAATGTCA +
Preference number: 5 (lower is better)
Translates to: PLLTERAPHGLSRRWEWPEGRQL*FSTQMS
Trigger: TGACATTTGAGTGGAAAACAAAAGTTGTCTGCCCTC...AGGCCATTCCCACCTCCTGCTAAGACCATGGGGAGCCCTCTCTGTAAGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTGTCTGCCCACCGTCTTaGTACAGGTCAATTCTATCA +
Preference number: 5 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLVCPPS*YRSILS
Trigger: TGATAGAATTGACCTGTACAAAGACGGTGGGCAGAC...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTGTCAAGGTCCTTCCTTATTCACCTTaGAGTATTTGTAGGACACGT +
Preference number: 5 (lower is better)
Translates to: GTLPEVGRVRRVTSCVKVLPYSP*SICRTR
Trigger: ACGTGTCCTACAAATACTCAAAGGTGAATAAGGAAG...GACCTTGACACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTAGGGCTTTCACTGACTaGGTGGTAATATGGCCGTTC +
Preference number: 5 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSRAFTD*VVIWPF
Trigger: GAACGGCCATATTACCACCAAGTCAGTGAAAGCCCT...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTCAATCTTTGGGCAGGTaGTTTGAATTCACCAGCCGG +
Preference number: 5 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSQSLGR*FEFTSR
Trigger: CCGGCTGGTGAATTCAAACAACCTGCCCAAAGATTG...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAAGACAACATGCCTTTTaGCCATCCAGCTTACCAAGG +
Preference number: 5 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTRQHAF*PSSLPR
Trigger: CCTTGGTAAGCTGGATGGCAAAAAGGCATGTTGTCT...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCAGACAACATGCCTTTTaGCCATCCAGCTTACCAAGG +
Preference number: 5 (lower is better)
Translates to: PVWASLLINGVVSYRPPTRQHAF*PSSLPR
Trigger: CCTTGGTAAGCTGGATGGCAAAAAGGCATGTTGTCT...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTATGCACTCAAACGTGTaGTCACTTCTCCTTCCCCAC +
Preference number: 5 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSMHSNV*SLLLPH
Trigger: GTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCAT...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTCCTTGGTGTGGGGTTaGCCTATTCCATCTTTAGCA +
Preference number: 5 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPSLVWG*PIPSLA
Trigger: TGCTAAAGATGGAATAGGCAAACCCCACACCAAGGA...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGTCACTGTGGATTTCCTaGGTGTGGGGTTTGCCTATT +
Preference number: 5 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRSLWIS*VWGLPI
Trigger: AATAGGCAAACCCCACACCAAGGAAATCCACAGTGA...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTTCACTGTGGATTTCCTaGGTGTGGGGTTTGCCTATT +
Preference number: 5 (lower is better)
Translates to: APCDPIANRGKTCVPISASLWIS*VWGLPI
Trigger: AATAGGCAAACCCCACACCAAGGAAATCCACAGTGA...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CACAGCCAGAAGCAGGTTTTCCCAGGATGGTCCCACAGACAGGCATTGTGCCGCCATCAGTGCTTTAACTaGTACAATGGATCGGACCAG +
Preference number: 5 (lower is better)
Translates to: HSQKQVFPGWSHRQALCRHQCFN*YNGSDQ
Trigger: CTGGTCCGATCCATTGTACAAGTTAAAGCACTGATG...GCGGCACAATGCCTGTCTGTGGGACCATCCTGGGAAAACCTGCTTCTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR CAA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCGGCTATCTTGCCGCCTaGCACACAAGCTCACCTGCA +
Preference number: 5 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLGYLAA*HTSSPA
Trigger: TGCAGGTGAGCTTGTGTGCAAGGCGGCAAGATAGCC...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACACCCACCATCACTTCTaGGTTGTCACCGAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHTHHHF*VVTEAS
Trigger: GCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGT...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAGTCACAAGTCCTTTCTaGAACCTGACTTCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTVTSPF*NLTSCF
Trigger: GAAGCAGGAAGTCAGGTTCAAGAAAGGACTTGTGAC...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GGGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGGGCTTTTTCCCTATCTaGGCTATTGTGAATAATGCT +
Preference number: 5 (lower is better)
Translates to: GQIRHPPRGGAGEKSDLMGFFPI*AIVNNA
Trigger: AGCATTATTCACAATAGCCAAGATAGGGAAAAAGCC...CATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCTTGATCCATCTTTATTaGTCAGTAGACACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSLIHLY*SVDTEA
Trigger: AGCCTCAGTGTCTACTGACAAATAAAGATGGATCAA...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTGTGTTTGATGTAAGCTaGGGCAAACAGTGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: APCDPIANRGKTCVPISAVFDVS*GKQCSP
Trigger: GGGAGAACACTGTTTGCCCAAGCTTACATCAAACAC...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678224.1
CDS TCA 90 bp CCCAGGGTTTTCCCACACAGGAAGGCAATGCTGCTCTGGACTCTGTaGTTTGTGCCTTGCTGGTCACAGCTCACTGTTGTGTTGAATTCC +
Preference number: 5 (lower is better)
Translates to: PRVFPHRKAMLLWTL*FVPCWSQLTVVLNS
Trigger: GGAATTCAACACAACAGTGAGCTGTGACCAGCAAGGCACAAATCACAGAGTCCAGAGCAGCATTGCCTTCCTGTGTGGGAAAACCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS CCA 90 bp AACACGACATCGAGATCGCCGTCTGTCAAACGGGAAGGGCACACATaGCATGTCACCATCATTTTTCACGAGCAGACTGAGCTTAGCTCC +
Preference number: 5 (lower is better)
Translates to: NTTSRSPSVKREGHT*HVTIIFHEQTELSS
Trigger: GGAGCTAAGCTCAGTCTGCTCGTGAAAAATGATGGTGACATGCCATGTGTGCCCTTCCCGTTTGACAGACGGCGATCTCGATGTCGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569097.2
CDS-3UTR CAA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTAGCTTGATCAGAGGATaGAGATCATGCTTCCTCAAC +
Preference number: 5 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPSLIRG*RSCFLN
Trigger: GTTGAGGAAGCATGATCTCAATCCTCTGATCAAGCT...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTAGCTTGATCAGAGGATaGAGATCATGCTTCCTCAAC +
Preference number: 5 (lower is better)
Translates to: APCDPIANRGKTCVPISASLIRG*RSCFLN
Trigger: GTTGAGGAAGCATGATCTCAATCCTCTGATCAAGCT...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GCAGGAGGTGGGAATGGCCTGGAGAACAGCCCCCTGGGTAGAATGCCTGAGGACATGTCTCTACAAACATaGATGAATAGAGAAGTGTCC +
Preference number: 5 (lower is better)
Translates to: AGGGNGLENSPLGRMPEDMSLQT*MNREVS
Trigger: GGACACTTCTCTATTCATCAATGTTTGTAGAGACAT...GTCCTCAGGCATTCTACCCAGGGGGCTGTTCTCCAGGCCATTCCCACCTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGAGATTTAGCTGTGAGTTaGGGAATGGTGCCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERDLAVS*GMVPSL
Trigger: GAGAGAGGGCACCATTCCCAAACTCACAGCTAAATC...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCATCCAGATCACCTGGCTaGCATACAAGTGTGATATTA +
Preference number: 5 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPSRSPG*HTSVIL
Trigger: TAATATCACACTTGTATGCAAGCCAGGTGATCTGGA...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGGCCTCTGTAGTTCAGTaGGATCATCCCATCATAATA +
Preference number: 5 (lower is better)
Translates to: LINGVVSYRPPTQHAPWEASVVQ*DHPIII
Trigger: TATTATGATGGGATGATCCAACTGAACTACAGAGGC...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CAGGCTGAGGGATGCTGCAGGGCGGTTTGCTTCTCAGCAATAGAACACCAGAGTGCTGGCTTCCAATTCTaGAGCTCTTCAGTTTGGGTT +
Preference number: 5 (lower is better)
Translates to: QAEGCCRAVCFSAIEHQSAGFQF*SSSVWV
Trigger: AACCCAAACTGAAGAGCTCAAGAATTGGAAGCCAGC...ACTCTGGTGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCATCCCTCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCCCACACTTGTCACCGTaGACATACATGATGCTCAAA +
Preference number: 5 (lower is better)
Translates to: PVWASLLINGVVSYRPPTPHLSP*TYMMLK
Trigger: TTTGAGCATCATGTATGTCAACGGTGACAAGTGTGG...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGCCACACTTGTCACCGTaGACATACATGATGCTCAAA +
Preference number: 5 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRPHLSP*TYMMLK
Trigger: TTTGAGCATCATGTATGTCAACGGTGACAAGTGTGG...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GTGGAAGAAGATGGTGGAAGAAACAGACTTGGTCTTATCCTTTCCGCACTTAGACTCACGATGGTGTCGTaGAGGCCCAGGGGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: VEEDGGRNRLGLILSALRLTMVS*RPRGFR
Trigger: CCTGAAGCCCCTGGGCCTCAACGACACCATCGTGAG...TCTAAGTGCGGAAAGGATAAGACCAAGTCTGTTTCTTCCACCATCTTCTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACCATGAGGAGACCACCTaGGACTTGTCACTTGTGGGG +
Preference number: 5 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHHEETT*DLSLVG
Trigger: CCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATG...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTTTGCCAGCCCCATCTTaGAATGAACATTCAGTCAGA +
Preference number: 5 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLLPAPS*NEHSVR
Trigger: TCTGACTGAATGTTCATTCAAAGATGGGGCTGGCAA...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGTTGCCAGCCCCATCTTaGAATGAACATTCAGTCAGA +
Preference number: 5 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQLPAPS*NEHSVR
Trigger: TCTGACTGAATGTTCATTCAAAGATGGGGCTGGCAA...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCCAGTCATCATGCTCGTaGCTCTTCATGGGACAGGCT +
Preference number: 5 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTQSSCS*LFMGQA
Trigger: AGCCTGTCCCATGAAGAGCAACGAGCATGATGACTG...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGCCATCAATAGGAACTTaGCACACAGCGGCTCCGGCA +
Preference number: 5 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVPSIGT*HTAAPA
Trigger: TGCCGGAGCCGCTGTGTGCAAAGTTCCTATTGATGG...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGTAATCCAGTTTCATaGATTGCAGCCGTCCAAAGG +
Preference number: 5 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPCNPVS*IAAVQR
Trigger: CCTTTGGACGGCTGCAATCAATGAAACTGGATTACA...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAATACGTGACAACAACTTaGTCACCTATGACACCCAGC +
Preference number: 5 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQYVTTT*SPMTPS
Trigger: GCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTA...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTATCGAGATCGCCGTCTaGAAGGTAGTACTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPIEIAV*KVVLGL
Trigger: AAGACCAAGTACTACCTTCAAGACGGCGATCTCGAT...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACAGGAAGTCTTATTTGGTaGGAGGTGCTTGGCTGTCCC +
Preference number: 5 (lower is better)
Translates to: PEVEEVEEGADASGVTFTGSLIW*EVLGCP
Trigger: GGGACAGCCAAGCACCTCCAACCAAATAAGACTTCC...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTTCTGTACGCCCAGGCTaGAAGATATCATGCAAAAAG +
Preference number: 5 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLSVRPG*KISCKK
Trigger: CTTTTTGCATGATATCTTCAAGCCTGGGCGTACAGA...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGACAATCTTTGGGCAGGTaGTTTGAATTCACCAGCCGG +
Preference number: 5 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERQSLGR*FEFTSR
Trigger: CCGGCTGGTGAATTCAAACAACCTGCCCAAAGATTG...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTCACACAAATCAATCTTaGGGCAGGTTGTTTGAATTC +
Preference number: 5 (lower is better)
Translates to: QREPRRQSEASQLSTATAHTNQS*GRLFEF
Trigger: GAATTCAAACAACCTGCCCAAAGATTGATTTGTGTG...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CATGGCAGGAAAGGCGCTGCCGCCAGAATAAGAACACCAGCAGCGCCTCCCTCCAAAAATACACTCATGTaGAAATCAAACAAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: HGRKGAAARIRTPAAPPSKNTLM*KSNKPA
Trigger: GGCTGGCTTGTTTGATTTCAACATGAGTGTATTTTT...GGAGGGAGGCGCTGCTGGTGTTCTTATTCTGGCGGCAGCGCCTTTCCTGCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTGAGTCCAATTCTGATTaGCTGTCACGGGATGTTTTC +
Preference number: 5 (lower is better)
Translates to: APCDPIANRGKTCVPISAESNSD*LSRDVF
Trigger: GAAAACATCCCGTGACAGCAAATCAGAATTGGACTC...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp TACAACCTCCTGGTGACACACACACTGGCTCCTTGTGACCCGATCGCCAACAGGCATCAGTGCTTTAACTaGTACAATGGATCGGACCAG +
Preference number: 5 (lower is better)
Translates to: YNLLVTHTLAPCDPIANRHQCFN*YNGSDQ
Trigger: CTGGTCCGATCCATTGTACAAGTTAAAGCACTGATG...CCTGTTGGCGATCGGGTCACAAGGAGCCAGTGTGTGTGTCACCAGGAGGTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAGTCACAAGTCCTTTCTaGAACCTGACTTCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQVTSPF*NLTSCF
Trigger: GAAGCAGGAAGTCAGGTTCAAGAAAGGACTTGTGAC...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GCTGATCGTTGGGCTTCACCTGGCATATGTTGGCTCCAGAGCACGCCGGGTTTCGATGCTGAGCATTTTTaGATATACCTGTTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: ADRWASPGICWLQSTPGFDAEHF*IYLFGP
Trigger: AGGCCCAAACAGGTATATCAAAAAATGCTCAGCATC...GAAACCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAAGCCCAACGATCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GAACATTCGGTCGCTTGCTCGCAGGCCAGCGGCGTGTGCCAGGAGAAGAAGAGACTGACTTCATTTCTTTaGGATATACACCCAGATGTG +
Preference number: 5 (lower is better)
Translates to: EHSVACSQASGVCQEKKRLTSFL*DIHPDV
Trigger: CACATCTGGGTGTATATCCAAAAGAAATGAAGTCAG...TCTCTTCTTCTCCTGGCACACGCCGCTGGCCTGCGAGCAAGCGACCGAATGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGCCCCTGACTTCATTTCTTTaGGATATACACCCAGATGTG +
Preference number: 5 (lower is better)
Translates to: APEGHCSVRFSLGGSSLPLTSFL*DIHPDV
Trigger: CACATCTGGGTGTATATCCAAAAGAAATGAAGTCAG...GGGCAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTCTGACTTCATTTCTTTaGGATATACACCCAGATGTG +
Preference number: 5 (lower is better)
Translates to: QREPRRQSEASQLSTATALTSFL*DIHPDV
Trigger: CACATCTGGGTGTATATCCAAAAGAAATGAAGTCAG...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTTTGATCCATCTTTATTaGTCAGTAGACACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCLIHLY*SVDTEA
Trigger: AGCCTCAGTGTCTACTGACAAATAAAGATGGATCAA...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTTTGATCCATCTTTATTaGTCAGTAGACACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: QREPRRQSEASQLSTATALIHLY*SVDTEA
Trigger: AGCCTCAGTGTCTACTGACAAATAAAGATGGATCAA...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAATTAAATATGTCTTTCTaGCAGGCTGCAGTGGTCCTC +
Preference number: 5 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQLNMSF*QAAVVL
Trigger: GAGGACCACTGCAGCCTGCAAGAAAGACATATTTAA...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTATGTCTCTACAAACATaGATGAATAGAGAAGTGTCC +
Preference number: 5 (lower is better)
Translates to: QREPRRQSEASQLSTATAMSLQT*MNREVS
Trigger: GGACACTTCTCTATTCATCAATGTTTGTAGAGACAT...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CTCATCAACGGTGTGGTCTCATACAGACCACCCACCCAGCATGCTCCGTGGGAGTTACCTGCGGTTTTATaGCACTCAAAGTTTATGACG +
Preference number: 5 (lower is better)
Translates to: LINGVVSYRPPTQHAPWELPAVL*HSKFMT
Trigger: CGTCATAAACTTTGAGTGCAATAAAACCGCAGGTAA...CTCCCACGGAGCATGCTGGGTGGGTGGTCTGTATGAGACCACACCGTTGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGTTACCTGCGGTTTTATaGCACTCAAAGTTTATGACG +
Preference number: 5 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLLPAVL*HSKFMT
Trigger: CGTCATAAACTTTGAGTGCAATAAAACCGCAGGTAA...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGGAACACAAATCCACTGTaGGGATCCCTTATAGAGCAA +
Preference number: 5 (lower is better)
Translates to: TSGMVRTSSSLSWSSPCRNTNPL*GSLIEQ
Trigger: TTGCTCTATAAGGGATCCCAACAGTGGATTTGTGTT...CCTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCCCCAGAGTCGATATCTaGATGCAGGAATTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTPRVDI*MQEFEG
Trigger: CCCCTCAAATTCCTGCATCAAGATATCGACTCTGGG...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GTGGAAGAAGATGGTGGAAGAAACAGACTTGGTCTTATCCTTTCCGCACTTAGAAGCCAGGTCGGTGACTaGGCAGTCCACTGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: VEEDGGRNRLGLILSALRSQVGD*AVHWRR
Trigger: CCTTCTCCAGTGGACTGCCAAGTCACCGACCTGGCT...TCTAAGTGCGGAAAGGATAAGACCAAGTCTGTTTCTTCCACCATCTTCTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGCCACACTTGTCACCGTaGACATACATGATGCTCAAA +
Preference number: 5 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLPHLSP*TYMMLK
Trigger: TTTGAGCATCATGTATGTCAACGGTGACAAGTGTGG...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTGGGCCTGGAGTTCACTaGGCTCTCGCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVGPGVH*ALAAGE
Trigger: TTCACCTGCAGCGAGAGCCAAGTGAACTCCAGGCCC...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp TCCAACACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTCATTTGCTATTGGATaGAGTATTGGTGGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: SNTPRPYCPQLNVAILPPSFAIG*SIGGPA
Trigger: AGCAGGACCACCAATACTCAATCCAATAGCAAATGA...AGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGTGTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACATGTTTCTGGACGAATTaGCACTCCAACTTCTTTGGA +
Preference number: 5 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTCFWTN*HSNFFG
Trigger: TCCAAAGAAGTTGGAGTGCAAATTCGTCCAGAAACA...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CACCTCTGGGATGGTCAGAACCTCATCCTCACTGTCCTGGTCATCCCCATGCAGTGTTTCTGGACGAATTaGCACTCCAACTTCTTTGGA +
Preference number: 5 (lower is better)
Translates to: HLWDGQNLILTVLVIPMQCFWTN*HSNFFG
Trigger: TCCAAAGAAGTTGGAGTGCAAATTCGTCCAGAAACA...CTGCATGGGGATGACCAGGACAGTGAGGATGAGGTTCTGACCATCCCAGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACATCGATATCAAACCTCTaGAATGCAGGTCTGCCCACC +
Preference number: 5 (lower is better)
Translates to: PEVEEVEEGADASGVTFTSISNL*NAGLPT
Trigger: GGTGGGCAGACCTGCATTCAAGAGGTTTGATATCGA...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CAAAGCAAATGCACTCAAACGTGTTGTCACTTCTCCTTCCCCACTGACAGCGACCCGAGGCTGAAGCTCTaGCCATTTATAGGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: QSKCTQTCCHFSFPTDSDPRLKL*PFIGLV
Trigger: CACCAACCCTATAAATGGCAAGAGCTTCAGCCTCGG...GTCGCTGTCAGTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCATTTGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp TTGCCTACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGTTCACCTGGCATATGTaGGCTCCAGAGCACGCCGGG +
Preference number: 5 (lower is better)
Translates to: LPTVKCLVLTRIAQSTVKFTWHM*APEHAG
Trigger: CCCGGCGTGCTCTGGAGCCAACATATGCCAGGTGAA...CTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR CAA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATCGTTCTGACAGCCCCTaGTGCATCTGCCCGTCGTCC +
Preference number: 5 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNRSDSP*CICPSS
Trigger: GGACGACGGGCAGATGCACAAGGGGCTGTCAGAACG...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCACTTCCTTATTCACCTTaGAGTATTTGTAGGACACGT +
Preference number: 5 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPLPYSP*SICRTR
Trigger: ACGTGTCCTACAAATACTCAAAGGTGAATAAGGAAG...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAATCTGTACGCCCAGGCTaGAAGATATCATGCAAAAAG +
Preference number: 5 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQSVRPG*KISCKK
Trigger: CTTTTTGCATGATATCTTCAAGCCTGGGCGTACAGA...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGTCCATGTTCATTGTTTaGATGAACAGGACCACACCC +
Preference number: 5 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLSMFIV*MNRTTP
Trigger: GGGTGTGGTCCTGTTCATCAAAACAATGAACATGGA...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GGCAAATCAGGCACCCTCCCAGAGGTGGGGCGGGTGAGAAGAGTGACCTCATGTTTAAAAATGAGACGGTaGAGGTTTTTGGACTCTACA +
Preference number: 5 (lower is better)
Translates to: GKSGTLPEVGRVRRVTSCLKMRR*RFLDST
Trigger: TGTAGAGTCCAAAAACCTCAACCGTCTCATTTTTAA...ACATGAGGTCACTCTTCTCACCCGCCCCACCTCTGGGAGGGTGCCTGATTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCATGCACTCAAACGTGTaGTCACTTCTCCTTCCCCAC +
Preference number: 5 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTMHSNV*SLLLPH
Trigger: GTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCAT...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp ACCTCTGCACCCTTTCACCAACATCTGCTCACTTCCTGCACCCTCTGGCCTTTGGAGTCCAATTCTGATTaGCTGTCACGGGATGTTTTC +
Preference number: 5 (lower is better)
Translates to: TSAPFHQHLLTSCTLWPLESNSD*LSRDVF
Trigger: GAAAACATCCCGTGACAGCAAATCAGAATTGGACTC...CAAAGGCCAGAGGGTGCAGGAAGTGAGCAGATGTTGGTGAAAGGGTGCAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CAGAGAGAGCCTCGCAGGCAGTCTGAGGCTTCTCAGCTCAGCACAGCCACAGCTTCTAATGTCTATATGTaGTCTCCTGTCTGTATGTCT +
Preference number: 5 (lower is better)
Translates to: QREPRRQSEASQLSTATASNVYM*SPVCMS
Trigger: AGACATACAGACAGGAGACAACATATAGACATTAGA...AGCTGTGGCTGTGCTGAGCTGAGAAGCCTCAGACTGCCTGCGAGGCTCTCTCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCGGCTATCTTGCCGCCTaGCACACAAGCTCACCTGCA +
Preference number: 5 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTGYLAA*HTSSPA
Trigger: TGCAGGTGAGCTTGTGTGCAAGGCGGCAAGATAGCC...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCGATGCTGAGCATTTTTaGATATACCTGTTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: PVWASLLINGVVSYRPPTDAEHF*IYLFGP
Trigger: AGGCCCAAACAGGTATATCAAAAAATGCTCAGCATC...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCCTCAGCTCATCCATGTaGTCACAAATGACAGGATTT +
Preference number: 5 (lower is better)
Translates to: PVWASLLINGVVSYRPPTLSSSM*SQMTGF
Trigger: AAATCCTGTCATTTGTGACAACATGGATGAGCTGAG...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACACAGCAATCACTAGGCTaGTTTCTTGTGTGTGGTTTT +
Preference number: 5 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTQQSLG*FLVCGF
Trigger: AAAACCACACACAAGAAACAAGCCTAGTGATTGCTG...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678224.1
CDS-3UTR CAA 90 bp AACCCTGGGCACAAGGTACCGCCCTGTGGCCGATCTGAGCCATGCCTTATTCCAGCTGACTTGCCTGCTTaGTGGTTAATTTTTGCTAAA +
Preference number: 5 (lower is better)
Translates to: NPGHKVPPCGRSEPCLIPADLPA*WLIFAK
Trigger: TTTAGCAAAAATTAACCACAAAGCAGGCAAGTCAGC...TGGAATAAGGCATGGCTCAGATCGGCCACAGGGCGGTACCTTGTGCCCAGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678224.1
CDS GCA 90 bp GCAGGCTGCAGTGGTCCTCCACTCAAAGTAGTGCACACATTCTGTTaGAGTTACAAATTCAGGAGTTCCCAGGGTTTTCCCACACAGGAA +
Preference number: 5 (lower is better)
Translates to: AGCSGPPLKVVHTFC*SYKFRSSQGFPTQE
Trigger: TTCCTGTGTGGGAAAACCCTGGGAACTCCTGAATTTGTAACTGCAACAGAATGTGTGCACTACTTTGAGTGGAGGACCACTGCAGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS GCA 90 bp AAGCCCACCCCAGAAGCAGCTCCAGCCACTCAGGACCACTCGAAATaGATCCAAGAGACACATCATCACTCAGTTCTAAGCGTATTTTAC +
Preference number: 5 (lower is better)
Translates to: KPTPEAAPATQDHSK*IQETHHHSVLSVFY
Trigger: GTAAAATACGCTTAGAACTGAGTGATGATGTGTCTCTTGGATGCATTTCGAGTGGTCCTGAGTGGCTGGAGCTGCTTCTGGGGTGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678224.1
CDS CCA 90 bp GGCAGAATTTCCCGACTCAACACTGACGGCAGCTCGGAGCGAGGGTaGTTATTTTACTCACTTCTTTTCATCACCACAATGGACAGGGAA +
Preference number: 5 (lower is better)
Translates to: GRISRLNTDGSSERG*LFYSLLFITTMDRE
Trigger: TTCCCTGTCCATTGTGGTGATGAAAAGAAGTGAGTAAAATAACCACCCTCGCTCCGAGCTGCCGTCAGTGTTGAGTCGGGAAATTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS-3UTR CAA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATAGGACAAGCCTGTCCTaGCGCACCAGCTTCAGTCCG +
Preference number: 5 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNRTSLS*RTSFSP
Trigger: CGGACTGAAGCTGGTGCGCAAGGACAGGCTTGTCCT...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GCAACCCACCATCACTTCTTGGTTGTCACCGAGGCCAGCATCCCAAGGCTGCTTTTACCTGCGGTTTTATaGCACTCAAAGTTTATGACG +
Preference number: 5 (lower is better)
Translates to: ATHHHFLVVTEASIPRLLLPAVL*HSKFMT
Trigger: CGTCATAAACTTTGAGTGCAATAAAACCGCAGGTAA...AAGCAGCCTTGGGATGCTGGCCTCGGTGACAACCAAGAAGTGATGGTGGGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCTCTTCTCATCACTTTTaGCCACCTGGCAGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALSSHHF*PPGRLL
Trigger: CAGGAGCCTGCCAGGTGGCAAAAAGTGATGAGAAGA...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356956.6
ENST00000677704.1
CDS-3UTR CAA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAAACACAAATCCACTGTaGGGATCCCTTATAGAGCAA +
Preference number: 5 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQNTNPL*GSLIEQ
Trigger: TTGCTCTATAAGGGATCCCAACAGTGGATTTGTGTT...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACATTCAGGTCATACAAGTaGCCATGCCTTGGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: PEVEEVEEGADASGVTFTFRSYK*PCLGSF
Trigger: GAAAGACCCAAGGCATGGCAACTTGTATGACCTGAA...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTCATGAGGAGACCACCTaGGACTTGTCACTTGTGGGG +
Preference number: 5 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLHEETT*DLSLVG
Trigger: CCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATG...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCCGAGGTTCACGGGCTaGGAGCCACCCAGCAGACAC +
Preference number: 5 (lower is better)
Translates to: QASDALKMFIRTRFPLHCPRFTG*EPPSRH
Trigger: GTGTCTGCTGGGTGGCTCCAAGCCCGTGAACCTCGG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CACACAAGCTCACCTGCACCACGACTGCCCGTTGACCCCATTCTCACAGAACAAGAGGGCAGACAACTTTaGTTTTCCACTCAAATGTCA +
Preference number: 5 (lower is better)
Translates to: HTSSPAPRLPVDPILTEQEGRQL*FSTQMS
Trigger: TGACATTTGAGTGGAAAACAAAAGTTGTCTGCCCTC...TTGTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTGCAGGTGAGCTTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAGGGCTTTCACTGACTaGGTGGTAATATGGCCGTTC +
Preference number: 5 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVRAFTD*VVIWPF
Trigger: GAACGGCCATATTACCACCAAGTCAGTGAAAGCCCT...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GCTCCTTGTGACCCGATCGCCAACAGGGGTAAGACCTGTGTACCCATCAGTGCTCACACAAATCAATCTTaGGGCAGGTTGTTTGAATTC +
Preference number: 5 (lower is better)
Translates to: APCDPIANRGKTCVPISAHTNQS*GRLFEF
Trigger: GAATTCAAACAACCTGCCCAAAGATTGATTTGTGTG...AGCACTGATGGGTACACAGGTCTTACCCCTGTTGGCGATCGGGTCACAAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CACGCTCCTGAAGGGCATTGCTCTGTGCGTTTCTCACTGGGTGGGAGCTCTCTGTTAAAAATGAGACGGTaGAGGTTTTTGGACTCTACA +
Preference number: 5 (lower is better)
Translates to: HAPEGHCSVRFSLGGSSLLKMRR*RFLDST
Trigger: TGTAGAGTCCAAAAACCTCAACCGTCTCATTTTTAA...CAGAGAGCTCCCACCCAGTGAGAAACGCACAGAGCAATGCCCTTCAGGAGCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTCACCACGACTGCCCGTaGACCCCATTCTCACAGAAC +
Preference number: 5 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVHHDCP*TPFSQN
Trigger: GTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTG...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CATGAGGAGACCACCTTGGACTTGTCACTTGTGGGGCAGACGTCTGAGGAAAGCGACAACTCACTTCATTaGAACTGCAGTTACGCAGAA +
Preference number: 5 (lower is better)
Translates to: HEETTLDLSLVGQTSEESDNSLH*NCSYAE
Trigger: TTCTGCGTAACTGCAGTTCAAATGAAGTGAGTTGTC...GCTTTCCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGGTGGTCTCCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS TCA 90 bp ACTCCAGCGCACACTTACCTGCGGTTTTATTGCACTCAAAGTTTATaGCGCTCATCCGCTGAAACCCTGAGCTGCATTCATCACCTCCAA +
Preference number: 5 (lower is better)
Translates to: TPAHTYLRFYCTQSL*RSSAETLSCIHHLQ
Trigger: TTGGAGGTGATGAATGCAGCTCAGGGTTTCAGCGGATGAGCGTCATAAACTTTGAGTGCAATAAAACCGCAGGTAAGTGTGCGCTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS TCA 90 bp CTCATTACTCAGAGAAATGCACGCCTTCAGCTTCAATGCACCCAGTaGCATTCTGCAATCCCCAGATCCAAACTCTACCATAGGGTCACC +
Preference number: 5 (lower is better)
Translates to: LITQRNARLQLQCTQ*HSAIPRSKLYHRVT
Trigger: GGTGACCCTATGGTAGAGTTTGGATCTGGGGATTGCAGAATGTCACTGGGTGCATTGAAGCTGAAGGCGTGCATTTCTCTGAGTAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS GCA 90 bp ATTTTTATCCACTGCACACACTGCCGCGTCCTCGGGACACCCTCGTaGCTTGCCTTCCTGCAGCACTCTGTGACAAATATTAATGAAAAA +
Preference number: 5 (lower is better)
Translates to: IFIHCTHCRVLGTPS*LAFLQHSVTNINEK
Trigger: TTTTTCATTAATATTTGTCACAGAGTGCTGCAGGAAGGCAAGGCACGAGGGTGTCCCGAGGACGCGGCAGTGTGTGCAGTGGATAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS GCA 90 bp GCCAGTGCTAAACCTAGTTCAAGAGACAAGCTAGCCCAGAGAAGTTaGACTGGTCTTGTAACAGTGTCTCAGCACTGTATCTGGAGGTCT +
Preference number: 5 (lower is better)
Translates to: ASAKPSSRDKLAQRS*TGLVTVSQHCIWRS
Trigger: AGACCTCCAGATACAGTGCTGAGACACTGTTACAAGACCAGTGCAACTTCTCTGGGCTAGCTTGTCTCTTGAACTAGGTTTAGCACTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS-3UTR CAA 90 bp CAGCTCCCCTGCCCGAGTGAACTTTCACCTCTGGGATGGTCAGAACCTCATCCTATGTCTCTACAAACATaGATGAATAGAGAAGTGTCC +
Preference number: 5 (lower is better)
Translates to: QLPCPSELSPLGWSEPHPMSLQT*MNREVS
Trigger: GGACACTTCTCTATTCATCAATGTTTGTAGAGACAT...AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCGGACACCCTCGTGCCTaGCCTTCCTGCAGCACTCTG +
Preference number: 5 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIGHPRA*PSCSTL
Trigger: CAGAGTGCTGCAGGAAGGCAAGGCACGAGGGTGTCC...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATAGCCTCTTGTTGGCCTaGCCCACGCTAATCCTGGTC +
Preference number: 5 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNSLLLA*PTLILV
Trigger: GACCAGGATTAGCGTGGGCAAGGCCAACAAGAGGCT...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTAGAGTGCATGTCTGCTaGTCCAGGGAGATGAGCATG +
Preference number: 5 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIRVHVC*SREMSM
Trigger: CATGCTCATCTCCCTGGACAAGCAGACATGCACTCT...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGGTCCTTACAGCCTCCTaGTTCTGGCCCGACTGCAAA +
Preference number: 5 (lower is better)
Translates to: IGPHVPRGSEQLKINISEVLTAS*FWPDCK
Trigger: TTTGCAGTCGGGCCAGAACAAGGAGGCTGTAAGGAC...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGATGTCCGGTAGCTGTTaGAGTGTCTGCAGAAGCCCC +
Preference number: 5 (lower is better)
Translates to: IGPHVPRGSEQLKINISEMSGSC*SVCRSP
Trigger: GGGGCTTCTGCAGACACTCAAACAGCTACCGGACAT...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCGAGTGGAAGTCTTATTaGGTTGGAGGTGCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALEWKSY*VGGAWL
Trigger: CAGCCAAGCACCTCCAACCAAATAAGACTTCCACTC...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp ACCCCCAGGCCATACTGTCCCCAACTCAATGTGGCTATCTTGCCGCCTTGCACAAAAAATACACTCATGTaGAAATCAAACAAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: TPRPYCPQLNVAILPPCTKNTLM*KSNKPA
Trigger: GGCTGGCTTGTTTGATTTCAACATGAGTGTATTTTT...TGTGCAAGGCGGCAAGATAGCCACATTGAGTTGGGGACAGTATGGCCTGGGGGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACCACCCACCTCTAATGTCTATATGTaGTCTCCTGTCTGTATGTCT +
Preference number: 5 (lower is better)
Translates to: PVWASLLINGVVSYRPPTSNVYM*SPVCMS
Trigger: AGACATACAGACAGGAGACAACATATAGACATTAGA...GGTGGGTGGTCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTCAACCTCCCATCTGGTaGCTGAAGCGTCTCCATCTC +
Preference number: 5 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVQPPIW*LKRLHL
Trigger: GAGATGGAGACGCTTCAGCAACCAGATGGGAGGTTG...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCACCCCATTCACTAGATaGTGTTTCCCTCAAACACTG +
Preference number: 5 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTTPFTR*CFPQTL
Trigger: CAGTGTTTGAGGGAAACACAATCTAGTGAATGGGGT...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GGCAGCCCGGGAGTCCCAGCTGAAGTAGTAAGTGCAGCTGTCGATATCAAACCTTTGATCCATCTTTATTaGTCAGTAGACACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: GSPGVPAEVVSAAVDIKPLIHLY*SVDTEA
Trigger: AGCCTCAGTGTCTACTGACAAATAAAGATGGATCAA...AGGTTTGATATCGACAGCTGCACTTACTACTTCAGCTGGGACTCCCGGGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS TCA 90 bp GGACTCTGTGATTTGTGCCTTGCTGGTCACAGCTCACTGTTGTGTTaGATTCCAGGAGAGATCTGGTTGCACTTCTCAAAACAGAGTCAC +
Preference number: 5 (lower is better)
Translates to: GLCDLCLAGHSSLLC*IPGEIWLHFSKQSH
Trigger: GTGACTCTGTTTTGAGAAGTGCAACCAGATCTCTCCTGGAATTCAACACAACAGTGAGCTGTGACCAGCAAGGCACAAATCACAGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS TCA 90 bp AACTGTGTCTACAATCGTCAAGATATGGACAGCGGCACCGCTTTTTaGTATGCCAGTGCCTTGGTGACTCAAGGGTGCTTCTCATTACTC +
Preference number: 5 (lower is better)
Translates to: NCVYNRQDMDSGTAF*YASALVTQGCFSLL
Trigger: GAGTAATGAGAAGCACCCTTGAGTCACCAAGGCACTGGCATATCAAAAAGCGGTGCCGCTGTCCATATCTTGACGATTGTAGACACAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS GCA 90 bp GTCTCCATCCGAATATCGGAGGGTCTGATTGTGGTATCTTCCTGCTaGTTTGACTTGAGAGGTATCGCTCTTTTTCACTTGGCAAACTGC +
Preference number: 5 (lower is better)
Translates to: VSIRISEGLIVVSSC*FDLRGIALFHLANC
Trigger: GCAGTTTGCCAAGTGAAAAAGAGCGATACCTCTCAAGTCAAAGCAGCAGGAAGATACCACAATCAGACCCTCCGATATTCGGATGGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000649737.1
ENST00000676781.1
ENST00000677704.1
CDS GCA 90 bp GAGGTCTCCATCCGAATATCGGAGGGTCTGATTGTGGTATCTTCCTaGTGCTTTGACTTGAGAGGTATCGCTCTTTTTCACTTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: EVSIRISEGLIVVSS*CFDLRGIALFHLAN
Trigger: GTTTGCCAAGTGAAAAAGAGCGATACCTCTCAAGTCAAAGCAGCAGGAAGATACCACAATCAGACCCTCCGATATTCGGATGGAGACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000649737.1
ENST00000676781.1
ENST00000677704.1
CDS GCA 90 bp CAATCGTCAAGATATGGACAGCGGCACCGCTTTTTGATATGCCAGTaGCTTGGTGACTCAAGGGTGCTTCTCATTACTCAGAGAAATGCA +
Preference number: 5 (lower is better)
Translates to: QSSRYGQRHRFLICQ*LGDSRVLLITQRNA
Trigger: TGCATTTCTCTGAGTAATGAGAAGCACCCTTGAGTCACCAAGGCACTGGCATATCAAAAAGCGGTGCCGCTGTCCATATCTTGACGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS GCA 90 bp TGTCTACAATCGTCAAGATATGGACAGCGGCACCGCTTTTTGATATaGCAGTGCCTTGGTGACTCAAGGGTGCTTCTCATTACTCAGAGA +
Preference number: 5 (lower is better)
Translates to: CLQSSRYGQRHRFLI*QCLGDSRVLLITQR
Trigger: TCTCTGAGTAATGAGAAGCACCCTTGAGTCACCAAGGCACTGGCATATCAAAAAGCGGTGCCGCTGTCCATATCTTGACGATTGTAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS CCA 90 bp ATCCTTTGGCAATTTCTGAGTCACCCCTTTTCCAAACTCAGCGTCTaGAAGGAATCAGTTCTGTTCACAAACAGCAGCTCACATGCACCC +
Preference number: 5 (lower is better)
Translates to: ILWQFLSHPFSKLSV*KESVLFTNSSSHAP
Trigger: GGGTGCATGTGAGCTGCTGTTTGTGAACAGAACTGATTCCTTCCAGACGCTGAGTTTGGAAAAGGGGTGACTCAGAAATTGCCAAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS-3UTR CAA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACTTAAATATGTCTTTCTaGCAGGCTGCAGTGGTCCTC +
Preference number: 5 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHLNMSF*QAAVVL
Trigger: GAGGACCACTGCAGCCTGCAAGAAAGACATATTTAA...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCGCCTCTGTAGTTCAGTaGGATCATCCCATCATAATA +
Preference number: 5 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTASVVQ*DHPIII
Trigger: TATTATGATGGGATGATCCAACTGAACTACAGAGGC...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCACATGTTCCCCTGAGTaGTCCATGGCATACCAGTTT +
Preference number: 5 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALTCSPE*SMAYQF
Trigger: AAACTGGTATGCCATGGACAACTCAGGGGAACATGT...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTAGTGTTTCGGATCCCTaGCCCAGAGTCGATATCTTG +
Preference number: 5 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAISVSDP*PRVDIL
Trigger: CAAGATATCGACTCTGGGCAAGGGATCCGAAACACT...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTCGCTGGTTCCCACACTaGTCACCGTTGACATACATG +
Preference number: 5 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVRWFPH*SPLTYM
Trigger: CATGTATGTCAACGGTGACAAGTGTGGGAACCAGCG...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GTGGAAGAAGATGGTGGAAGAAACAGACTTGGTCTTATCCTTTCCGCACTTAGAGAGAGGTCGAAGGAGTaGCCAGCCCCATCTTTGAAT +
Preference number: 5 (lower is better)
Translates to: VEEDGGRNRLGLILSALRERSKE*PAPSLN
Trigger: ATTCAAAGATGGGGCTGGCAACTCCTTCGACCTCTC...TCTAAGTGCGGAAAGGATAAGACCAAGTCTGTTTCTTCCACCATCTTCTTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GTGGAAGAAGATGGTGGAAGAAACAGACTTGGTCTTATCCTTTCCGCACTTAGAAGAGTGCATGTCTGCTaGTCCAGGGAGATGAGCATG +
Preference number: 5 (lower is better)
Translates to: VEEDGGRNRLGLILSALRRVHVC*SREMSM
Trigger: CATGCTCATCTCCCTGGACAAGCAGACATGCACTCT...TCTAAGTGCGGAAAGGATAAGACCAAGTCTGTTTCTTCCACCATCTTCTTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCAGAGGTGGAAGAGGTAGAAGAAGGGGCTGACGCATCGGGTGTAACTTTTACATGTGATGGAGGAAAGTaGGATCTCATACAGGTAGTT +
Preference number: 5 (lower is better)
Translates to: PEVEEVEEGADASGVTFTCDGGK*DLIQVV
Trigger: AACTACCTGTATGAGATCCAACTTTCCTCCATCACA...TGTAAAAGTTACACCCGATGCGTCAGCCCCTTCTTCTACCTCTTCCACCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGTCCATGTTCATTGTTTaGATGAACAGGACCACACCC +
Preference number: 5 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVSMFIV*MNRTTP
Trigger: GGGTGTGGTCCTGTTCATCAAAACAATGAACATGGA...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCCGTATTATTTTAGGGTaGGTGAAGTACAGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTRIILG*VKYRLQ
Trigger: CTGAAGCCTGTACTTCACCAACCCTAAAATAATACG...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACACCCCATTCACTAGATaGTGTTTCCCTCAAACACTG +
Preference number: 5 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHTPFTR*CFPQTL
Trigger: CAGTGTTTGAGGGAAACACAATCTAGTGAATGGGGT...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS TCA 90 bp CATCCGAATATCGGAGGGTCTGATTGTGGTATCTTCCTGCTGCTTTaGCTTGAGAGGTATCGCTCTTTTTCACTTGGCAAACTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: HPNIGGSDCGIFLLL*LERYRSFSLGKLQL
Trigger: AAGCTGCAGTTTGCCAAGTGAAAAAGAGCGATACCTCTCAAGTCAAAGCAGCAGGAAGATACCACAATCAGACCCTCCGATATTCGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000649737.1
ENST00000676781.1
ENST00000677704.1
CDS TCA 90 bp TTCCTTTCCCATCGTTACCTGCGGTTTTATTGCACTCAAAGTTTATaGCGCTCATCCGCTGAAACCCTGAGCTGCATTCATCACCTCCAA +
Preference number: 5 (lower is better)
Translates to: FLSHRYLRFYCTQSL*RSSAETLSCIHHLQ
Trigger: TTGGAGGTGATGAATGCAGCTCAGGGTTTCAGCGGATGAGCGTCATAAACTTTGAGTGCAATAAAACCGCAGGTAACGATGGGAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS TCA 90 bp CAGCACACTCTCAAAGATCTCGGCCAAGTCATTAATAAAAAGCCCTaGACAGAACAGGCCAAAGGAGGTCATCACAAAGTTGCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: QHTLKDLGQVINKKP*TEQAKGGHHKVAGR
Trigger: TCTCCCTGCAACTTTGTGATGACCTCCTTTGGCCTGTTCTGTTCAGGGCTTTTTATTAATGACTTGGCCGAGATCTTTGAGAGTGTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS TCA 90 bp CTCATGTTCAGAAAGGGTTATCATGTTCCCAGCAGTCCTCAGCACTaGTTTACCCTGGGCCATACTAGGGATCAACTGTTAACACCCTTA +
Preference number: 5 (lower is better)
Translates to: LMFRKGYHVPSSPQH*FTLGHTRDQLLTPL
Trigger: TAAGGGTGTTAACAGTTGATCCCTAGTATGGCCCAGGGTAAATCAGTGCTGAGGACTGCTGGGAACATGATAACCCTTTCTGAACATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677704.1
CDS-3UTR CAA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATGCATACAAACAGCACTaGATGGCCCGCACTGGACAA +
Preference number: 5 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNAYKQH*MARTGQ
Trigger: TTGTCCAGTGCGGGCCATCAAGTGCTGTTTGTATGC...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTGCTGGCTTCCAATTCTaGAGCTCTTCAGTTTGGGTT +
Preference number: 5 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIAGFQF*SSSVWV
Trigger: AACCCAAACTGAAGAGCTCAAGAATTGGAAGCCAGC...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ATCCTCACTCTCATCATAAGCCTCATAACCACCAGTGCGATGAATAAGGGGAGACCCAGATTCCAGCTATaGCCTTCTGACACTAAGCAA +
Preference number: 5 (lower is better)
Translates to: ILTLIISLITTSAMNKGRPRFQL*PSDTKQ
Trigger: TTGCTTAGTGTCAGAAGGCAATAGCTGGAATCTGGG...TCTCCCCTTATTCATCGCACTGGTGGTTATGAGGCTTATGATGAGAGTGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTTCCATTCGCCGCGGCTaGGGGACTCATCTGCACCAC +
Preference number: 5 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCSIRRG*GTHLHH
Trigger: GTGGTGCAGATGAGTCCCCAAGCCGCGGCGAATGGA...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTTTCAGGTCATACAAGTaGCCATGCCTTGGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIFRSYK*PCLGSF
Trigger: GAAAGACCCAAGGCATGGCAACTTGTATGACCTGAA...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CATCATAATATGAAAGCTTCGCATTACTCAGACCCAAGTTCCAAGTCTTCTCATCCTTGGACTTGTCACTaGTGGGGCAGACGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: HHNMKASHYSDPSSKSSHPWTCH*WGRRLR
Trigger: CCTCAGACGTCTGCCCCACAAGTGACAAGTCCAAGG...ATGAGAAGACTTGGAACTTGGGTCTGAGTAATGCGAAGCTTTCATATTATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR CAA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGCCAAAGGATGCCCCCTaGGTGCCTGAGAGCAGACAG +
Preference number: 5 (lower is better)
Translates to: KGMENRMLSLRSLFITLEPKDAP*VPESRQ
Trigger: CTGTCTGCTCTCAGGCACCAAGGGGGCATCCTTTGG...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCTGCACTCCAACTTCTTaGGAGGGCAGACAACTTTTG +
Preference number: 5 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTCTPTS*EGRQLL
Trigger: CAAAAGTTGTCTGCCCTCCAAAGAAGTTGGAGTGCA...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCTGTTTCTGGACGAATTaGCACTCCAACTTCTTTGGA +
Preference number: 5 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLCFWTN*HSNFFG
Trigger: TCCAAAGAAGTTGGAGTGCAAATTCGTCCAGAAACA...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACTGTGATGGAGGAAAGTaGGATCTCATACAGGTAGTT +
Preference number: 5 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHCDGGK*DLIQVV
Trigger: AACTACCTGTATGAGATCCAACTTTCCTCCATCACA...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTAGGGCTTTCACTGACTaGGTGGTAATATGGCCGTTC +
Preference number: 5 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVRAFTD*VVIWPF
Trigger: GAACGGCCATATTACCACCAAGTCAGTGAAAGCCCT...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTATGCAGCCCTCTGTTTaGAGATGCGTCCGGCCTTAT +
Preference number: 5 (lower is better)
Translates to: ITTSAMNKGRQVNNRASIMQPSV*RCVRPY
Trigger: ATAAGGCCGGACGCATCTCAAAACAGAGGGCTGCAT...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTCCAAGGGAAGGCAGATaGGACCCAAAGTTAACACCT +
Preference number: 5 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVPREGR*DPKLTP
Trigger: AGGTGTTAACTTTGGGTCCAATCTGCCTTCCCTTGG...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTTCACTGTGGATTTCCTaGGTGTGGGGTTTGCCTATT +
Preference number: 5 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAISLWIS*VWGLPI
Trigger: AATAGGCAAACCCCACACCAAGGAAATCCACAGTGA...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CAGCTTAGGCGTTCCCATGCTCACACCTCTCTTACAGTGAAACGCGATGAGCGATCTAATGTCTATATGTaGTCTCCTGTCTGTATGTCT +
Preference number: 5 (lower is better)
Translates to: QLRRSHAHTSLTVKRDERSNVYM*SPVCMS
Trigger: AGACATACAGACAGGAGACAACATATAGACATTAGA...TCGCTCATCGCGTTTCACTGTAAGAGAGGTGTGAGCATGGGAACGCCTAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCACCACGACTGCCCGTaGACCCCATTCTCACAGAAC +
Preference number: 5 (lower is better)
Translates to: QASDALKMFIRTRFPLHCHHDCP*TPFSQN
Trigger: GTTCTGTGAGAATGGGGTCAACGGGCAGTCGTGGTG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp ATTAGCAGGCAGCCAGTGGTGCAGACAACATGCCTTTTTGCCATCCAGCTTACCGGCTTTTTCCCTATCTaGGCTATTGTGAATAATGCT +
Preference number: 5 (lower is better)
Translates to: ISRQPVVQTTCLFAIQLTGFFPI*AIVNNA
Trigger: AGCATTATTCACAATAGCCAAGATAGGGAAAAAGCC...GGTAAGCTGGATGGCAAAAAGGCATGTTGTCTGCACCACTGGCTGCCTGCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CCATGCCTTATTCCAATGACTGTAAACAATCAGGAAGGAGTGGGGCCTGACCTCCTCAGCTCATCCATGTaGTCACAAATGACAGGATTT +
Preference number: 5 (lower is better)
Translates to: PCLIPMTVNNQEGVGPDLLSSSM*SQMTGF
Trigger: AAATCCTGTCATTTGTGACAACATGGATGAGCTGAG...GAGGTCAGGCCCCACTCCTTCCTGATTGTTTACAGTCATTGGAATAAGGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS GCA 90 bp GCATGGCACCTCCTTATTTGCTTTAAATATGTCTTTCTTGCAGGCTaGAGTGGTCCTCCACTCAAAGTAGTGCACACATTCTGTTGCAGT +
Preference number: 5 (lower is better)
Translates to: AWHLLICFKYVFLAG*SGPPLKVVHTFCCS
Trigger: ACTGCAACAGAATGTGTGCACTACTTTGAGTGGAGGACCACTGCAGCCTGCAAGAAAGACATATTTAAAGCAAATAAGGAGGTGCCATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTTCCTGCTGCTTTGACTaGAGAGGTATCGCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLSCCFD*RGIALF
Trigger: AAAAAGAGCGATACCTCTCAAGTCAAAGCAGCAGGA...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CTTTCATCTAGACTATCTTGCTCAAAAGCCCAATCTGGCCCTCCTACAGCTCTCTCCAGATCACCTGGCTaGCATACAAGTGTGATATTA +
Preference number: 5 (lower is better)
Translates to: LSSRLSCSKAQSGPPTALSRSPG*HTSVIL
Trigger: TAATATCACACTTGTATGCAAGCCAGGTGATCTGGA...GAGAGCTGTAGGAGGGCCAGATTGGGCTTTTGAGCAAGATAGTCTAGATGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTGCCGATGCATATCGGTaGCAGCCCGGCACTGGATTC +
Preference number: 5 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCADAYR*QPGTGF
Trigger: GAATCCAGTGCCGGGCTGCAACCGATATGCATCGGC...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTGGTCTGTATCCGTCGTaGTCTGAATGGGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: QASDALKMFIRTRFPLHCGLYPS*SEWDRQ
Trigger: CTGCCTGTCCCATTCAGACAACGACGGATACAGACC...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ATAACCACCAGTGCGATGAATAAGGGGAGACAAGTCAACAATAGAGCTTCCATTAGTGTTTCGGATCCCTaGCCCAGAGTCGATATCTTG +
Preference number: 5 (lower is better)
Translates to: ITTSAMNKGRQVNNRASISVSDP*PRVDIL
Trigger: CAAGATATCGACTCTGGGCAAGGGATCCGAAACACT...AATGGAAGCTCTATTGTTGACTTGTCTCCCCTTATTCATCGCACTGGTGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTATGAGCATGGGCCTATaGGTTGGCCTGGCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCMSMGL*VGLASG
Trigger: GCCTGAGGCCAGGCCAACCAATAGGCCCATGCTCAT...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTATGTCCGGTAGCTGTTaGAGTGTCTGCAGAAGCCCC +
Preference number: 5 (lower is better)
Translates to: QASDALKMFIRTRFPLHCMSGSC*SVCRSP
Trigger: GGGGCTTCTGCAGACACTCAAACAGCTACCGGACAT...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTGTCTGCCCACCGTCTTaGTACAGGTCAATTCTATCA +
Preference number: 5 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVVCPPS*YRSILS
Trigger: TGATAGAATTGACCTGTACAAAGACGGTGGGCAGAC...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTATCGAGATCGCCGTCTaGAAGGTAGTACTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVIEIAV*KVVLGL
Trigger: AAGACCAAGTACTACCTTCAAGACGGCGATCTCGAT...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp AAACTCAAAGTAAGTGTTTCGGATCCCTTGCCCAGAGTCGATATCTTGATGCAGTCCTTGGTGTGGGGTTaGCCTATTCCATCTTTAGCA +
Preference number: 5 (lower is better)
Translates to: KLKVSVSDPLPRVDILMQSLVWG*PIPSLA
Trigger: TGCTAAAGATGGAATAGGCAAACCCCACACCAAGGA...CTGCATCAAGATATCGACTCTGGGCAAGGGATCCGAAACACTTACTTTGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS-3UTR CAA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCCATCAGTGCTTTAACTaGTACAATGGATCGGACCAG +
Preference number: 5 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTHQCFN*YNGSDQ
Trigger: CTGGTCCGATCCATTGTACAAGTTAAAGCACTGATG...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACATCAGTGCTTTAACTaGTACAATGGATCGGACCAG +
Preference number: 5 (lower is better)
Translates to: FDIPVWASLLINGVVSYRHQCFN*YNGSDQ
Trigger: CTGGTCCGATCCATTGTACAAGTTAAAGCACTGATG...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTAGTTCAAGTATGATTTaGCAGTTAGACCCAAGGGCC +
Preference number: 5 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAISSSMI*QLDPRA
Trigger: GGCCCTTGGGTCTAACTGCAAAATCATACTTGAACT...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GATCGGACCAGCCCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGGGCTTTTTCCCTATCTaGGCTATTGTGAATAATGCT +
Preference number: 5 (lower is better)
Translates to: DRTSPKCSLITRWHLSRVGFFPI*AIVNNA
Trigger: AGCATTATTCACAATAGCCAAGATAGGGAAAAAGCC...CACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGGGCTGGTCCGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS TCA 90 bp GGTTTTATTGCACTCAAAGTTTATGACGCTCATCCGCTGAAACCCTaGGCTGCATTCATCACCTCCAAAATATATCAAGGTGAGGTCTCC +
Preference number: 5 (lower is better)
Translates to: GFIALKVYDAHPLKP*AAFITSKIYQGEVS
Trigger: GGAGACCTCACCTTGATATATTTTGGAGGTGATGAATGCAGCTCAGGGTTTCAGCGGATGAGCGTCATAAACTTTGAGTGCAATAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000649737.1
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GTGGAAGAAGATGGTGGAAGAAACAGACTTGGTCTTATCCTTTCCGCACTTAGATCCTGCTGCTTTGACTaGAGAGGTATCGCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: VEEDGGRNRLGLILSALRSCCFD*RGIALF
Trigger: AAAAAGAGCGATACCTCTCAAGTCAAAGCAGCAGGA...TCTAAGTGCGGAAAGGATAAGACCAAGTCTGTTTCTTCCACCATCTTCTTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCCTTGAGCTCTTCAGTTaGGGTTTCTGCCTCACAGCC +
Preference number: 5 (lower is better)
Translates to: VTERRNFPDRSKPNGTMILELFS*GFCLTA
Trigger: GGCTGTGAGGCAGAAACCCAAACTGAAGAGCTCAAG...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTAGCCTCTTGTTGGCCTaGCCCACGCTAATCCTGGTC +
Preference number: 5 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCSLLLA*PTLILV
Trigger: GACCAGGATTAGCGTGGGCAAGGCCAACAAGAGGCT...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATTACGTGACAACAACTTaGTCACCTATGACACCCAGC +
Preference number: 5 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNYVTTT*SPMTPS
Trigger: GCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTA...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATTTGCCATTTATAGGGTaGGTGATGGTCCCATTCACC +
Preference number: 5 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNLPFIG*VMVPFT
Trigger: GGTGAATGGGACCATCACCAACCCTATAAATGGCAA...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CACAATTTGCCTACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTTTGCCATTTATAGGGTaGGTGATGGTCCCATTCACC +
Preference number: 5 (lower is better)
Translates to: HNLPTVKCLVLTRIAQSTLPFIG*VMVPFT
Trigger: GGTGAATGGGACCATCACCAACCCTATAAATGGCAA...AGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTAGGCAAATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR CAA 90 bp GAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGAAATTCATAACCCGAGGCTGAAGCTCTaGCCATTTATAGGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: EMLSSDTYRSIHCQEIHNPRLKL*PFIGLV
Trigger: CACCAACCCTATAAATGGCAAGAGCTTCAGCCTCGG...GTTATGAATTTCTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR CAA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTTGTGATGGAGGAAAGTaGGATCTCATACAGGTAGTT +
Preference number: 5 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLCDGGK*DLIQVV
Trigger: AACTACCTGTATGAGATCCAACTTTCCTCCATCACA...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ATGCTAGGGCCGAGGCTCTGGCCCATGATTTTTCATGCAGTTTCTGTAAGTCACTTAAAAATGAGACGGTaGAGGTTTTTGGACTCTACA +
Preference number: 5 (lower is better)
Translates to: MLGPRLWPMIFHAVSVSHLKMRR*RFLDST
Trigger: TGTAGAGTCCAAAAACCTCAACCGTCTCATTTTTAA...GTGACTTACAGAAACTGCATGAAAAATCATGGGCCAGAGCCTCGGCCCTAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GATTTCACGTGTGGTCAGCAACTCTCCTTTAAAGACTCTGAAAGGTCTCACACCCGTATTATTTTAGGGTaGGTGAAGTACAGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: DFTCGQQLSFKDSERSHTRIILG*VKYRLQ
Trigger: CTGAAGCCTGTACTTCACCAACCCTAAAATAATACG...GGTGTGAGACCTTTCAGAGTCTTTAAAGGAGAGTTGCTGACCACACGTGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCTCAATGTGGCTATCTaGCCGCCTTGCACACAAGCT +
Preference number: 5 (lower is better)
Translates to: QASDALKMFIRTRFPLHCLNVAI*PPCTQA
Trigger: AGCTTGTGTGCAAGGCGGCAAGATAGCCACATTGAG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTACCCCATTCACTAGATaGTGTTTCCCTCAAACACTG +
Preference number: 5 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVTPFTR*CFPQTL
Trigger: CAGTGTTTGAGGGAAACACAATCTAGTGAATGGGGT...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp TTGCCTACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGAAGCCACGGATTACCTaGAAGGTAGTACTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: LPTVKCLVLTRIAQSTVKKPRIT*KVVLGL
Trigger: AAGACCAAGTACTACCTTCAAGGTAATCCGTGGCTT...CTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR CAA 90 bp TTGCCTACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGGTTAAATGTGGAACTTaGTGGGAAGCCACGGATTAC +
Preference number: 5 (lower is better)
Translates to: LPTVKCLVLTRIAQSTVKVKCGT*WEATDY
Trigger: GTAATCCGTGGCTTCCCACAAAGTTCCACATTTAAC...CTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS TCA 90 bp TTACCTGCGGTTTTATTGCACTCAAAGTTTATGACGCTCATCCGCTaGAACCCTGAGCTGCATTCATCACCTCCAAAATATATCAAGGTG +
Preference number: 5 (lower is better)
Translates to: LPAVLLHSKFMTLIR*NPELHSSPPKYIKV
Trigger: CACCTTGATATATTTTGGAGGTGATGAATGCAGCTCAGGGTTTCAGCGGATGAGCGTCATAAACTTTGAGTGCAATAAAACCGCAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000649737.1
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ATTGGTCCTCATGTCCCCAGAGGCTCTGAACAGCTTAAAATAAATATCTCCGAGTCCAGATCACCTGGCTaGCATACAAGTGTGATATTA +
Preference number: 5 (lower is better)
Translates to: IGPHVPRGSEQLKINISESRSPG*HTSVIL
Trigger: TAATATCACACTTGTATGCAAGCCAGGTGATCTGGA...CTCGGAGATATTTATTTTAAGCTGTTCAGAGCCTCTGGGGACATGAGGACCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTTCATTTGCTATTGGATaGAGTATTGGTGGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVSFAIG*SIGGPA
Trigger: AGCAGGACCACCAATACTCAATCCAATAGCAAATGA...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTGAGGGCAGACAACTTTaGTTTTCCACTCAAATGTCA +
Preference number: 5 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVEGRQL*FSTQMS
Trigger: TGACATTTGAGTGGAAAACAAAAGTTGTCTGCCCTC...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp AGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGAAATTCATTCGATATCAAACCTCTaGAATGCAGGTCTGCCCACC +
Preference number: 5 (lower is better)
Translates to: SEMLSSDTYRSIHCQEIHSISNL*NAGLPT
Trigger: GGTGGGCAGACCTGCATTCAAGAGGTTTGATATCGA...ATGAATTTCTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR CAA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACTTCCTTATTCACCTTaGAGTATTTGTAGGACACGT +
Preference number: 5 (lower is better)
Translates to: FDIPVWASLLINGVVSYRLPYSP*SICRTR
Trigger: ACGTGTCCTACAAATACTCAAAGGTGAATAAGGAAG...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTATGACACCCAGCTTCTTCCTTATTCACCTTaGAGTATTTGTAGGACACGT +
Preference number: 5 (lower is better)
Translates to: RITFGVRDNNFVTYDTQLLPYSP*SICRTR
Trigger: ACGTGTCCTACAAATACTCAAAGGTGAATAAGGAAG...AAGCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCAATCTTTGGGCAGGTaGTTTGAATTCACCAGCCGG +
Preference number: 5 (lower is better)
Translates to: QASDALKMFIRTRFPLHCQSLGR*FEFTSR
Trigger: CCGGCTGGTGAATTCAAACAACCTGCCCAAAGATTG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp TTTGATATACCTGTTTGGGCCTCACTGCTCATCAACGGTGTGGTCTCATACAGACACACAAATCAATCTTaGGGCAGGTTGTTTGAATTC +
Preference number: 5 (lower is better)
Translates to: FDIPVWASLLINGVVSYRHTNQS*GRLFEF
Trigger: GAATTCAAACAACCTGCCCAAAGATTGATTTGTGTG...TCTGTATGAGACCACACCGTTGATGAGCAGTGAGGCCCAAACAGGTATATCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CTTTTCTCCACATCCTCACCCACACTTGTTGTCTTTCGTCTGACAGTAGCCATTCACACAAATCAATCTTaGGGCAGGTTGTTTGAATTC +
Preference number: 5 (lower is better)
Translates to: LFSTSSPTLVVFRLTVAIHTNQS*GRLFEF
Trigger: GAATTCAAACAACCTGCCCAAAGATTGATTTGTGTG...AATGGCTACTGTCAGACGAAAGACAACAAGTGTGGGTGAGGATGTGGAGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTATGCTGCAGGGCGGTTaGCTTCTCAGCAATAGAACA +
Preference number: 5 (lower is better)
Translates to: QASDALKMFIRTRFPLHCMLQGG*LLSNRT
Trigger: TGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCAT...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTCCAAGGGAAGGCAGATaGGACCCAAAGTTAACACCT +
Preference number: 5 (lower is better)
Translates to: QASDALKMFIRTRFPLHCPREGR*DPKLTP
Trigger: AGGTGTTAACTTTGGGTCCAATCTGCCTTCCCTTGG...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTCAACCTCCCATCTGGTaGCTGAAGCGTCTCCATCTC +
Preference number: 5 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCQPPIW*LKRLHL
Trigger: GAGATGGAGACGCTTCAGCAACCAGATGGGAGGTTG...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATAGTTCAAGTATGATTTaGCAGTTAGACCCAAGGGCC +
Preference number: 5 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNSSSMI*QLDPRA
Trigger: GGCCCTTGGGTCTAACTGCAAAATCATACTTGAACT...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTCTCAGCTCATCCATGTaGTCACAAATGACAGGATTT +
Preference number: 5 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVLSSSM*SQMTGF
Trigger: AAATCCTGTCATTTGTGACAACATGGATGAGCTGAG...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS GCA 90 bp AGGAACAGGTCAGAAGTGTCCGTTCAATGGCTCCAGTATTTCAGCTaGATCAATGCTAAGGTTAACTTGGAGAATTTGACCTTTGAGTAT +
Preference number: 5 (lower is better)
Translates to: RNRSEVSVQWLQYFS*INAKVNLENLTFEY
Trigger: ATACTCAAAGGTCAAATTCTCCAAGTTAACCTTAGCATTGATGCAGCTGAAATACTGGAGCCATTGAACGGACACTTCTGACCTGTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475584.1
CDS CCA 90 bp GATATAATGCCCTTCTCATATCCTGCTCGTCCATTTCGATCTTTTTaGATAATGATTCTGTCTTCCCAGCATCCCCAAATGAGATCAGCA +
Preference number: 5 (lower is better)
Translates to: DIMPFSYPARPFRSF*IMILSSQHPQMRSA
Trigger: TGCTGATCTCATTTGGGGATGCTGGGAAGACAGAATCATTATCCAAAAAGATCGAAATGGACGAGCAGGATATGAGAAGGGCATTATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS-3UTR CAA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGGATTTAGCTGTGAGTTaGGGAATGGTGCCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: KGMENRMLSLRSLFITLEDLAVS*GMVPSL
Trigger: GAGAGAGGGCACCATTCCCAAACTCACAGCTAAATC...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp ACATCTGTTAACAACATACAGAACAAGTGTTCCACGGGGCACACTGCGAAAAATGCCTCTGTAGTTCAGTaGGATCATCCCATCATAATA +
Preference number: 5 (lower is better)
Translates to: TSVNNIQNKCSTGHTAKNASVVQ*DHPIII
Trigger: TATTATGATGGGATGATCCAACTGAACTACAGAGGC...ATTTTTCGCAGTGTGCCCCGTGGAACACTTGTTCTGTATGTTGTTAACAGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTAGAGTGCATGTCTGCTaGTCCAGGGAGATGAGCATG +
Preference number: 5 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCRVHVC*SREMSM
Trigger: CATGCTCATCTCCCTGGACAAGCAGACATGCACTCT...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp GAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGAAATTCATAACTACGTGACAACAACTTaGTCACCTATGACACCCAGC +
Preference number: 5 (lower is better)
Translates to: EMLSSDTYRSIHCQEIHNYVTTT*SPMTPS
Trigger: GCTGGGTGTCATAGGTGACAAAGTTGTTGTCACGTA...GTTATGAATTTCTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR CAA 90 bp TACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGAAATTGTCTGCCCACCGTCTTaGTACAGGTCAATTCTATCA +
Preference number: 5 (lower is better)
Translates to: YSEMLSSDTYRSIHCQEIVCPPS*YRSILS
Trigger: TGATAGAATTGACCTGTACAAAGACGGTGGGCAGAC...AATTTCTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR CAA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGCTTTGGGCAGGTTGTTaGAATTCACCAGCCGGCAAA +
Preference number: 5 (lower is better)
Translates to: KGMENRMLSLRSLFITLELWAGC*NSPAGK
Trigger: TTTGCCGGCTGGTGAATTCAAACAACCTGCCCAAAG...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp AAAGGGATGGAGAATAGGATGTTGAGTCTAAGAAGTTTGTTTATAACACTGGAGATGCTGCAGGGCGGTTaGCTTCTCAGCAATAGAACA +
Preference number: 5 (lower is better)
Translates to: KGMENRMLSLRSLFITLEMLQGG*LLSNRT
Trigger: TGTTCTATTGCTGAGAAGCAAACCGCCCTGCAGCAT...CTCCAGTGTTATAAACAAACTTCTTAGACTCAACATCCTATTCTCCATCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCTCACTGTGGATTTCCTaGGTGTGGGGTTTGCCTATT +
Preference number: 5 (lower is better)
Translates to: VTERRNFPDRSKPNGTMISLWIS*VWGLPI
Trigger: AATAGGCAAACCCCACACCAAGGAAATCCACAGTGA...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CCAAAGTGTTCTTTAATCACCAGGTGGCATCTTAGTCGTGTGAAGGTCCTTGTTCTGACTTCATTTCTTTaGGATATACACCCAGATGTG +
Preference number: 5 (lower is better)
Translates to: PKCSLITRWHLSRVKVLVLTSFL*DIHPDV
Trigger: CACATCTGGGTGTATATCCAAAAGAAATGAAGTCAG...AACAAGGACCTTCACACGACTAAGATGCCACCTGGTGATTAAAGAACACTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS TCA 90 bp TTAAGCTTCTCAGACTCATACATTCATAAATCCTTTGGCAATTTCTaGGTCACCCCTTTTCCAAACTCAGCGTCTGGAAGGAATCAGTTC +
Preference number: 5 (lower is better)
Translates to: LSFSDSYIHKSFGNF*VTPFPNSASGRNQF
Trigger: GAACTGATTCCTTCCAGACGCTGAGTTTGGAAAAGGGGTGACTCAGAAATTGCCAAAGGATTTATGAATGTATGAGTCTGAGAAGCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS GCA 90 bp CTCTTCCCTGTAAGTCTGAAACGATATAATGCCCTTCTCATATCCTaGTCGTCCATTTCGATCTTTTTGGATAATGATTCTGTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: LFPVSLKRYNALLIS*SSISIFLDNDSVFP
Trigger: TGGGAAGACAGAATCATTATCCAAAAAGATCGAAATGGACGAGCAGGATATGAGAAGGGCATTATATCGTTTCAGACTTACAGGGAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS-3UTR CAA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTCCCAGAGTCGATATCTaGATGCAGGAATTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCPRVDI*MQEFEG
Trigger: CCCCTCAAATTCCTGCATCAAGATATCGACTCTGGG...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTCAATCTTTGGGCAGGTaGTTTGAATTCACCAGCCGG +
Preference number: 5 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCQSLGR*FEFTSR
Trigger: CCGGCTGGTGAATTCAAACAACCTGCCCAAAGATTG...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTATGCACTCAAACGTGTaGTCACTTCTCCTTCCCCAC +
Preference number: 5 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCMHSNV*SLLLPH
Trigger: GTGGGGAAGGAGAAGTGACAACACGTTTGAGTGCAT...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS TCA 90 bp CACTTGATGGCCCGCACTGGACAATATCCACACTTCCACAGATGTTaGTTTTATAAAGTACATTATTTTTGGTATCAACAGCTTCCCATG +
Preference number: 5 (lower is better)
Translates to: HLMARTGQYPHFHRC*FYKVHYFWYQQLPM
Trigger: CATGGGAAGCTGTTGATACCAAAAATAATGTACTTTATAAAATCAACATCTGTGGAAGTGTGGATATTGTCCAGTGCGGGCCATCAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp TACAGTGAAATGCTTAGTTCTGACACGTATCGCTCAATCCACTGTCAAGAAATTTGTGATGGAGGAAAGTaGGATCTCATACAGGTAGTT +
Preference number: 5 (lower is better)
Translates to: YSEMLSSDTYRSIHCQEICDGGK*DLIQVV
Trigger: AACTACCTGTATGAGATCCAACTTTCCTCCATCACA...AATTTCTTGACAGTGGATTGAGCGATACGTGTCAGAACTAAGCATTTCACTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS-3UTR CAA 90 bp GTTACAGAAAGGAGAAACTTTCCAGACAGAAGTAAACCAAATGGCACAATGATCCGTATTATTTTAGGGTaGGTGAAGTACAGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: VTERRNFPDRSKPNGTMIRIILG*VKYRLQ
Trigger: CTGAAGCCTGTACTTCACCAACCCTAAAATAATACG...GATCATTGTGCCATTTGGTTTACTTCTGTCTGGAAAGTTTCTCCTTTCTGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTTTGCCAGCCCCATCTTaGAATGAACATTCAGTCAGA +
Preference number: 5 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCLPAPS*NEHSVR
Trigger: TCTGACTGAATGTTCATTCAAAGATGGGGCTGGCAA...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS TCA 90 bp ACCACACGGATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTaGAACACACAAATGATTGAACTGACATTATTTCTAGTGCATTAT +
Preference number: 5 (lower is better)
Translates to: TTRITFGVRDNNFVT*NTQMIELTLFLVHY
Trigger: ATAATGCACTAGAAATAATGTCAGTTCAATCATTTGTGTGTTTCAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCGTGTGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677628.1
CDS-3UTR CAA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTAACACAAATCCACTGTaGGGATCCCTTATAGAGCAA +
Preference number: 5 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCNTNPL*GSLIEQ
Trigger: TTGCTCTATAAGGGATCCCAACAGTGGATTTGTGTT...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS-3UTR CAA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTAAAAATACACTCATGTaGAAATCAAACAAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: QASDALKMFIRTRFPLHCKNTLM*KSNKPA
Trigger: GGCTGGCTTGTTTGATTTCAACATGAGTGTATTTTT...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp CAGGCTTCAGATGCTCTTAAAATGTTCATAAGAACCAGATTTCCACTTCACTGTTTAAAAATGAGACGGTaGAGGTTTTTGGACTCTACA +
Preference number: 5 (lower is better)
Translates to: QASDALKMFIRTRFPLHCLKMRR*RFLDST
Trigger: TGTAGAGTCCAAAAACCTCAACCGTCTCATTTTTAA...ACAGTGAAGTGGAAATCTGGTTCTTATGAACATTTTAAGAGCATCTGAAGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS-3UTR CAA 90 bp TTACGTATTATTTTAGGGTTGGTGAAGTACAGGCTTCAGATGCTCTTAAAATGTAAAAATACACTCATGTaGAAATCAAACAAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: LRIILGLVKYRLQMLLKCKNTLM*KSNKPA
Trigger: GGCTGGCTTGTTTGATTTCAACATGAGTGTATTTTT...ACATTTTAAGAGCATCTGAAGCCTGTACTTCACCAACCCTAAAATAATACGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
ENST00000678224.1
CDS GCA 72 bp ATGCAGGTCCCAGCTGCTCGAGGGTCCCAGCCAGGCTaGTTGAACACCTCGGGTGGGACAAATCCACGCCCC +
Preference number: 6 (lower is better)
Translates to: MQVPAARGSQPG*LNTSGGTNPRP
Trigger: GGGGCGTGGATTTGTCCCACCCGAGGTGTTCAAGCAGCCTGGCTGGGACCCTCGAGCAGCTGGGACCTGCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS GCA 72 bp CTTTGCCTGCTTGCTAGGACGTTCGCAGGGGTGCGGTaGTACCAGGGCAGGGGTGCCTGTCTCTCCCAACGC +
Preference number: 6 (lower is better)
Translates to: LCLLARTFAGVR*YQGRGACLSQR
Trigger: GCGTTGGGAGAGACAGGCACCCCTGCCCTGGTAGCACCGCACCCCTGCGAACGTCCTAGCAAGCAGGCAAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS TCA 72 bp AGGTCCCAGCTGCTCGAGGGTCCCAGCCAGGCTGCTTaGACACCTCGGGTGGGACAAATCCACGCCCCTTTG +
Preference number: 6 (lower is better)
Translates to: RSQLLEGPSQAA*TPRVGQIHAPL
Trigger: CAAAGGGGCGTGGATTTGTCCCACCCGAGGTGTTCAAGCAGCCTGGCTGGGACCCTCGAGCAGCTGGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS GCA 72 bp ACTTCAGTTGGGTCCCGAGGCCCCCACTCCCCGGGCTaGGCAGGCCTAGGCAGAATTTCCCGACTCAACACT +
Preference number: 6 (lower is better)
Translates to: TSVGSRGPHSPG*AGLGRISRLNT
Trigger: AGTGTTGAGTCGGGAAATTCTGCCTAGGCCTGCGCAGCCCGGGGAGTGGGGGCCTCGGGACCCAACTGAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS GCA 72 bp TGGTTCTTTGCCTGCTTGCTAGGACGTTCGCAGGGGTaGGGTGCTACCAGGGCAGGGGTGCCTGTCTCTCCC +
Preference number: 6 (lower is better)
Translates to: WFFACLLGRSQG*GATRAGVPVSP
Trigger: GGGAGAGACAGGCACCCCTGCCCTGGTAGCACCGCACCCCTGCGAACGTCCTAGCAAGCAGGCAAAGAACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS CAA 72 bp CCCAGTGGCAAGACCCTGGGCTGGTTCTTTGCCTGCTaGCTAGGACGTTCGCAGGGGTGCGGTGCTACCAGG +
Preference number: 6 (lower is better)
Translates to: PSGKTLGWFFAC*LGRSQGCGATR
Trigger: CCTGGTAGCACCGCACCCCTGCGAACGTCCTAGCAAGCAGGCAAAGAACCAGCCCAGGGTCTTGCCACTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS GCA 72 bp GGCCCTAGAATTGCTCTGAGCAGTGGTGGGATGCCCTaGAGGGTGCCTGGAGTCACAGCCTGGGGGTCAACA +
Preference number: 6 (lower is better)
Translates to: GPRIALSSGGMP*RVPGVTAWGST
Trigger: TGTTGACCCCCAGGCTGTGACTCCAGGCACCCTGCAGGGCATCCCACCACTGCTCAGAGCAATTCTAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS GCA 72 bp CTTCCCAGTGGCAAGACCCTGGGCTGGTTCTTTGCCTaGTTGCTAGGACGTTCGCAGGGGTGCGGTGCTACC +
Preference number: 6 (lower is better)
Translates to: LPSGKTLGWFFA*LLGRSQGCGAT
Trigger: GGTAGCACCGCACCCCTGCGAACGTCCTAGCAAGCAGGCAAAGAACCAGCCCAGGGTCTTGCCACTGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS CCA 72 bp CTGTCCTTGCGCACCAGCTTCAGTCCGTCCCGGGGCTaGCCAACATCAAACGCCTGGTGTCCTCTTACCAGG +
Preference number: 6 (lower is better)
Translates to: LSLRTSFSPSRG*PTSNAWCPLTR
Trigger: CCTGGTAAGAGGACACCAGGCGTTTGATGTTGGCCAGCCCCGGGACGGACTGAAGCTGGTGCGCAAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS CCA 72 bp GGAGGCCCAGGCCCTAAAGCCACCCCAACACGGGACTaGCATGCTCCTCAATGTAGTGTGGCTCAGGCAGCA +
Preference number: 6 (lower is better)
Translates to: GGPGPKATPTRD*HAPQCSVAQAA
Trigger: TGCTGCCTGAGCCACACTACATTGAGGAGCATGCCAGTCCCGTGTTGGGGTGGCTTTAGGGCCTGGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS CCA 72 bp CAGAACCAAGGTCAGGCATCAGAGGGGCTGGGCACATaGGGAAGATACAGGCTGCATCCCTGGGGACTGGGG +
Preference number: 6 (lower is better)
Translates to: QNQGQASEGLGT*GRYRLHPWGLG
Trigger: CCCCAGTCCCCAGGGATGCAGCCTGTATCTTCCCCATGTGCCCAGCCCCTCTGATGCCTGACCTTGGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS TCA 72 bp CCAGGGCAGGGGTGCCTGTCTCTCCCAACGCAGACCTaGTCTCCGGAGGCTTCGAGAGCATGGTTCACATCA +
Preference number: 6 (lower is better)
Translates to: PGQGCLSLPTQT*SPEASRAWFTS
Trigger: TGATGTGAACCATGCTCTCGAAGCCTCCGGAGATCAGGTCTGCGTTGGGAGAGACAGGCACCCCTGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS GCA 72 bp GAGCCCTTGAAGCAGCTCACTGGCTTTCAGTCAAGGTaGTGCGAGACTTCAGTTGGGTCCCGAGGCCCCCAC +
Preference number: 6 (lower is better)
Translates to: EPLKQLTGFQSR*CETSVGSRGPH
Trigger: GTGGGGGCCTCGGGACCCAACTGAAGTCTCGCAGCACCTTGACTGAAAGCCAGTGAGCTGCTTCAAGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS CCA 72 bp GACGGCGCTGCAGGAAGGCGTCTCAGCACCCAAAGGTaGGAGGATAGTGTAGGAACAGGTCAGAAGTGTCCG +
Preference number: 6 (lower is better)
Translates to: DGAAGRRLSTQR*EDSVGTGQKCP
Trigger: CGGACACTTCTGACCTGTTCCTACACTATCCTCCCACCTTTGGGTGCTGAGACGCCTTCCTGCAGCGCCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475584.1
CDS GCA 72 bp CACTGCACACACTGCCGCGTCCTCGGGACACCCTCGTaGCTTGCCTTCCTGCAGCACTCTGTGACAAATATT +
Preference number: 6 (lower is better)
Translates to: HCTHCRVLGTPS*LAFLQHSVTNI
Trigger: AATATTTGTCACAGAGTGCTGCAGGAAGGCAAGGCACGAGGGTGTCCCGAGGACGCGGCAGTGTGTGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS GCA 72 bp CACAGGAAAGTGACTTCAAGCTTCCAGAGACGGCGCTaGAGGAAGGCGTCTCAGCACCCAAAGGTGGGAGGA +
Preference number: 6 (lower is better)
Translates to: HRKVTSSFQRRR*RKASQHPKVGG
Trigger: TCCTCCCACCTTTGGGTGCTGAGACGCCTTCCTGCAGCGCCGTCTCTGGAAGCTTGAAGTCACTTTCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475584.1
CDS CCA 72 bp CCCCAACACGGGACTGGCATGCTCCTCAATGTAGTGTaGCTCAGGCAGCACTTCCTCCTCTCTGAACTGCCT +
Preference number: 6 (lower is better)
Translates to: PQHGTGMLLNVV*LRQHFLLSELP
Trigger: AGGCAGTTCAGAGAGGAGGAAGTGCTGCCTGAGCCACACTACATTGAGGAGCATGCCAGTCCCGTGTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS CAA 72 bp AGGGGCAGGTGCCACAACAGCAGTTACTGGGGCATTTaGGGCTTGAAAGCCTTCCCAGTGGCAAGACCCTGG +
Preference number: 6 (lower is better)
Translates to: RGRCHNSSYWGI*GLKAFPVARPW
Trigger: CCAGGGTCTTGCCACTGGGAAGGCTTTCAAGCCCAAAATGCCCCAGTAACTGCTGTTGTGGCACCTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS TCA 72 bp CACTGCCACACGTGGGTGCTGGGAACACAACACATCTaGTTCCACGGGAGAGCTGGTGGGAACTCTGCATTC +
Preference number: 6 (lower is better)
Translates to: HCHTWVLGTQHI*FHGRAGGNSAF
Trigger: GAATGCAGAGTTCCCACCAGCTCTCCCGTGGAATCAGATGTGTTGTGTTCCCAGCACCCACGTGTGGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569097.2
CDS TCA 72 bp GACAGGATACGGAGCAGGGGCTGGCCATGCAGTACCTaGGTGATCAATGGACCAATCCTGCCCATGTCAGAG +
Preference number: 6 (lower is better)
Translates to: DRIRSRGWPCST*VINGPILPMSE
Trigger: CTCTGACATGGGCAGGATTGGTCCATTGATCACTCAGGTACTGCATGGCCAGCCCCTGCTCCGTATCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569097.2
CDS TCA 72 bp CTGCGCAGGCCTAGGCAGAATTTCCCGACTCAACACTaGCGGCAGCTCGGAGCGAGGGTGGTTATTTTACTC +
Preference number: 6 (lower is better)
Translates to: LRRPRQNFPTQH*RQLGARVVILL
Trigger: GAGTAAAATAACCACCCTCGCTCCGAGCTGCCGTCAGTGTTGAGTCGGGAAATTCTGCCTAGGCCTGCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS CCA 72 bp TGCACTGGTCTTGTAACAGTGTCTCAGCACTGTATCTaGAGGTCTTCCCTGCCTGGAGCAGCCCCGCCCAAT +
Preference number: 6 (lower is better)
Translates to: CTGLVTVSQHCI*RSSLPGAAPPN
Trigger: ATTGGGCGGGGCTGCTCCAGGCAGGGAAGACCTCCAGATACAGTGCTGAGACACTGTTACAAGACCAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS CCA 72 bp TCGAGGGTCCCAGCCAGGCTGCTTGAACACCTCGGGTaGGACAAATCCACGCCCCTTTGTTTCTACTATGAC +
Preference number: 6 (lower is better)
Translates to: SRVPARLLEHLG*DKSTPLCFYYD
Trigger: GTCATAGTAGAAACAAAGGGGCGTGGATTTGTCCCACCCGAGGTGTTCAAGCAGCCTGGCTGGGACCCTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS CCA 72 bp TTAACCTTGCCCAAAAAGAGGGCTGGCCTTGCTCCTTaGCTAATGACAGGATACGGAGCAGGGGCTGGCCAT +
Preference number: 6 (lower is better)
Translates to: LTLPKKRAGLAP*LMTGYGAGAGH
Trigger: ATGGCCAGCCCCTGCTCCGTATCCTGTCATTAGCCAAGGAGCAAGGCCAGCCCTCTTTTTGGGCAAGGTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569097.2
CDS CAA 90 bp AGGCAAGAATTTAACCTTGCCCAAAAAGAGGGCTGGCCTTGCTCCTaGGCTAATGACAGGATACGGAGCAGGGGCTGGCCATGCAGTACC +
Preference number: 6 (lower is better)
Translates to: RQEFNLAQKEGWPCS*ANDRIRSRGWPCST
Trigger: GGTACTGCATGGCCAGCCCCTGCTCCGTATCCTGTCATTAGCCAAGGAGCAAGGCCAGCCCTCTTTTTGGGCAAGGTTAAATTCTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569097.2
CDS CAA 90 bp TGGCCAAGCTCTCCCTGGCACCAGATGCAATGTGGCCGGGAAAACTaGAATATAATCCAAGCACATCCCAGGTCCAGATGCAGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: WPSSPWHQMQCGREN*NIIQAHPRSRCRSQ
Trigger: CTGGGACCTGCATCTGGACCTGGGATGTGCTTGGATTATATTCAAGTTTTCCCGGCCACATTGCATCTGGTGCCAGGGAGAGCTTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS TCA 72 bp AAATATAGGATGAACCTCCGCTCTGGGCAAGTGGTGTaGGGTCTATGGAGACATCCTGCTGCTCGCCGCTCA +
Preference number: 6 (lower is better)
Translates to: KYRMNLRSGQVV*GLWRHPAARRS
Trigger: TGAGCGGCGAGCAGCAGGATGTCTCCATAGACCTCACACCACTTGCCCAGAGCGGAGGTTCATCCTATATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000649737.1
ENST00000676781.1
ENST00000677704.1
CDS CCA 72 bp GGGAACACAACACATCTGATTCCACGGGAGAGCTGGTaGGAACTCTGCATTCAATTCCCTCCTGGACTCTGC +
Preference number: 6 (lower is better)
Translates to: GNTTHLIPRESW*ELCIQFPPGLC
Trigger: GCAGAGTCCAGGAGGGAATTGAATGCAGAGTTCCCACCAGCTCTCCCGTGGAATCAGATGTGTTGTGTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569097.2
CDS CCA 72 bp GCTGGGAACACAACACATCTGATTCCACGGGAGAGCTaGTGGGAACTCTGCATTCAATTCCCTCCTGGACTC +
Preference number: 6 (lower is better)
Translates to: AGNTTHLIPRES*WELCIQFPPGL
Trigger: GAGTCCAGGAGGGAATTGAATGCAGAGTTCCCACCAGCTCTCCCGTGGAATCAGATGTGTTGTGTTCCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569097.2
CDS CAA 72 bp TTCTGTTCACAAACAGCAGCTCACATGCACCCTCTGTaGGCCAAGCTCTCCCTGGCACCAGATGCAATGTGG +
Preference number: 6 (lower is better)
Translates to: FCSQTAAHMHPL*AKLSLAPDAMW
Trigger: CCACATTGCATCTGGTGCCAGGGAGAGCTTGGCCAACAGAGGGTGCATGTGAGCTGCTGTTTGTGAACAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS CAA 90 bp AGGAATCAGTTCTGTTCACAAACAGCAGCTCACATGCACCCTCTGTaGGCCAAGCTCTCCCTGGCACCAGATGCAATGTGGCCGGGAAAA +
Preference number: 6 (lower is better)
Translates to: RNQFCSQTAAHMHPL*AKLSLAPDAMWPGK
Trigger: TTTTCCCGGCCACATTGCATCTGGTGCCAGGGAGAGCTTGGCCAACAGAGGGTGCATGTGAGCTGCTGTTTGTGAACAGAACTGATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS GCA 72 bp TGGGCAAGTGGTGTGAGGTCTATGGAGACATCCTGCTaGTCGCCGCTCAGAGAACAAGTTTTACTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: WASGVRSMETSC*SPLREQVLLSR
Trigger: CCTGGAAAGTAAAACTTGTTCTCTGAGCGGCGAGCAGCAGGATGTCTCCATAGACCTCACACCACTTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000649737.1
ENST00000676781.1
ENST00000677704.1
CDS GCA 72 bp CTCTGGGCAAGTGGTGTGAGGTCTATGGAGACATCCTaGTGCTCGCCGCTCAGAGAACAAGTTTTACTTTCC +
Preference number: 6 (lower is better)
Translates to: LWASGVRSMETS*CSPLREQVLLS
Trigger: GGAAAGTAAAACTTGTTCTCTGAGCGGCGAGCAGCAGGATGTCTCCATAGACCTCACACCACTTGCCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000649737.1
ENST00000676781.1
ENST00000677704.1
CDS GCA 72 bp CAAGAATTTAACCTTGCCCAAAAAGAGGGCTGGCCTTaGTCCTTGGCTAATGACAGGATACGGAGCAGGGGC +
Preference number: 6 (lower is better)
Translates to: QEFNLAQKEGWP*SLANDRIRSRG
Trigger: GCCCCTGCTCCGTATCCTGTCATTAGCCAAGGAGCAAGGCCAGCCCTCTTTTTGGGCAAGGTTAAATTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569097.2
CDS GCA 72 bp CTGAACAGAACAGGCCAAAGGAGGTCATCACAAAGTTaGAGGGAGATTCAGACCACAGCAGAGCAGCCTGAG +
Preference number: 6 (lower is better)
Translates to: LNRTGQRRSSQS*REIQTTAEQPE
Trigger: CTCAGGCTGCTCTGCTGTGGTCTGAATCTCCCTGCAACTTTGTGATGACCTCCTTTGGCCTGTTCTGTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS CCA 72 bp TCGAGATCGCCGTCTGTCAAACGGGAAGGGCACACATaGCATGTCACCATCATTTTTCACGAGCAGACTGAG +
Preference number: 6 (lower is better)
Translates to: SRSPSVKREGHT*HVTIIFHEQTE
Trigger: CTCAGTCTGCTCGTGAAAAATGATGGTGACATGCCATGTGTGCCCTTCCCGTTTGACAGACGGCGATCTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569097.2
CDS CCA 72 bp AACAATGAACACTGCGGAGCCCTTGAAGCAGCTCACTaGCTTTCAGTCAAGGTGCTGCGAGACTTCAGTTGG +
Preference number: 6 (lower is better)
Translates to: NNEHCGALEAAH*LSVKVLRDFSW
Trigger: CCAACTGAAGTCTCGCAGCACCTTGACTGAAAGCCAGTGAGCTGCTTCAAGGGCTCCGCAGTGTTCATTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS CAA 72 bp AGGGAAGACTGCAAAACAATGAACACTGCGGAGCCCTaGAAGCAGCTCACTGGCTTTCAGTCAAGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: REDCKTMNTAEP*KQLTGFQSRCC
Trigger: GCAGCACCTTGACTGAAAGCCAGTGAGCTGCTTCAAGGGCTCCGCAGTGTTCATTGTTTTGCAGTCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS CAA 90 bp CCCACACAGGAAGGCAATGCTGCTCTGGACTCTGTGATTTGTGCCTaGCTGGTCACAGCTCACTGTTGTGTTGAATTCCAGGAGAGATCT +
Preference number: 6 (lower is better)
Translates to: PTQEGNAALDSVICA*LVTAHCCVEFQERS
Trigger: AGATCTCTCCTGGAATTCAACACAACAGTGAGCTGTGACCAGCAAGGCACAAATCACAGAGTCCAGAGCAGCATTGCCTTCCTGTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS CAA 90 bp CCAGACATAAGGGAAGACTGCAAAACAATGAACACTGCGGAGCCCTaGAAGCAGCTCACTGGCTTTCAGTCAAGGTGCTGCGAGACTTCA +
Preference number: 6 (lower is better)
Translates to: PDIREDCKTMNTAEP*KQLTGFQSRCCETS
Trigger: TGAAGTCTCGCAGCACCTTGACTGAAAGCCAGTGAGCTGCTTCAAGGGCTCCGCAGTGTTCATTGTTTTGCAGTCTTCCCTTATGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS TCA 72 bp ACACTAAGCACTCGCTCTACTCTAGCAGCACTGCCCTaGACCTCCATCATCATGCTCCTTATCTCTCTCTGC +
Preference number: 6 (lower is better)
Translates to: TLSTRSTLAALP*TSIIMLLISLC
Trigger: GCAGAGAGAGATAAGGAGCATGATGATGGAGGTTCAGGGCAGTGCTGCTAGAGTAGAGCGAGTGCTTAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS GCA 72 bp GCCAGACATAAGGGAAGACTGCAAAACAATGAACACTaGGGAGCCCTTGAAGCAGCTCACTGGCTTTCAGTC +
Preference number: 6 (lower is better)
Translates to: ARHKGRLQNNEH*GALEAAHWLSV
Trigger: GACTGAAAGCCAGTGAGCTGCTTCAAGGGCTCCGCAGTGTTCATTGTTTTGCAGTCTTCCCTTATGTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS GCA 72 bp GGTCACTCAATCAAAATTGACAAGCCATCCCGCCCCTaGCGAATCTGTCCTTGCTGTAGTTTAGTGTGCACC +
Preference number: 6 (lower is better)
Translates to: GHSIKIDKPSRP*RICPCCSLVCT
Trigger: GGTGCACACTAAACTACAGCAAGGACAGATTCGGCAGGGGCGGGATGGCTTGTCAATTTTGATTGAGTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS GCA 72 bp CCAGAAGCAGCTCCAGCCACTCAGGACCACTCGAAATaGATCCAAGAGACACATCATCACTCAGTTCTAAGC +
Preference number: 6 (lower is better)
Translates to: PEAAPATQDHSK*IQETHHHSVLS
Trigger: GCTTAGAACTGAGTGATGATGTGTCTCTTGGATGCATTTCGAGTGGTCCTGAGTGGCTGGAGCTGCTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678224.1
CDS CCA 72 bp CTGTTGGCCAAGCTCTCCCTGGCACCAGATGCAATGTaGCCGGGAAAACTTGAATATAATCCAAGCACATCC +
Preference number: 6 (lower is better)
Translates to: LLAKLSLAPDAM*PGKLEYNPSTS
Trigger: GGATGTGCTTGGATTATATTCAAGTTTTCCCGGCCACATTGCATCTGGTGCCAGGGAGAGCTTGGCCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS CAA 72 bp AGCAACGGCAACAAGAGGGAAGGCAAGAATTTAACCTaGCCCAAAAAGAGGGCTGGCCTTGCTCCTTGGCTA +
Preference number: 6 (lower is better)
Translates to: SNGNKREGKNLT*PKKRAGLAPWL
Trigger: TAGCCAAGGAGCAAGGCCAGCCCTCTTTTTGGGCAAGGTTAAATTCTTGCCTTCCCTCTTGTTGCCGTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569097.2
CDS CAA 72 bp TCTCCCTGGCACCAGATGCAATGTGGCCGGGAAAACTaGAATATAATCCAAGCACATCCCAGGTCCAGATGC +
Preference number: 6 (lower is better)
Translates to: SPWHQMQCGREN*NIIQAHPRSRC
Trigger: GCATCTGGACCTGGGATGTGCTTGGATTATATTCAAGTTTTCCCGGCCACATTGCATCTGGTGCCAGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS CAA 90 bp TGCAGGCTGCAGTGGTCCTCCACTCAAAGTAGTGCACACATTCTGTaGCAGTTACAAATTCAGGAGTTCCCAGGGTTTTCCCACACAGGA +
Preference number: 6 (lower is better)
Translates to: CRLQWSSTQSSAHIL*QLQIQEFPGFSHTG
Trigger: TCCTGTGTGGGAAAACCCTGGGAACTCCTGAATTTGTAACTGCAACAGAATGTGTGCACTACTTTGAGTGGAGGACCACTGCAGCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS TCA 72 bp GACGGGCAAACAAATGTAATAGTCACCGCAGGGCTGTaGCCATCACAAAAGTCTAGCTTTCCTGCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: DGQTNVIVTAGL*PSQKSSFPASS
Trigger: GGAAGAGGCAGGAAAGCTAGACTTTTGTGATGGTCACAGCCCTGCGGTGACTATTACATTTGTTTGCCCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS TCA 72 bp TACAATCGTCAAGATATGGACAGCGGCACCGCTTTTTaGTATGCCAGTGCCTTGGTGACTCAAGGGTGCTTC +
Preference number: 6 (lower is better)
Translates to: YNRQDMDSGTAF*YASALVTQGCF
Trigger: GAAGCACCCTTGAGTCACCAAGGCACTGGCATATCAAAAAGCGGTGCCGCTGTCCATATCTTGACGATTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS GCA 72 bp AAAGCAACCGCCTTCCCCAGAAGTTCTCAACACTGGTaGACTTTCCAGATCACCTGGCTTGCATACAAGTGT +
Preference number: 6 (lower is better)
Translates to: KATAFPRSSQHW*TFQITWLAYKC
Trigger: ACACTTGTATGCAAGCCAGGTGATCTGGAAAGTGCACCAGTGTTGAGAACTTCTGGGGAAGGCGGTTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS GCA 72 bp AGATATGGACAGCGGCACCGCTTTTTGATATGCCAGTaGCTTGGTGACTCAAGGGTGCTTCTCATTACTCAG +
Preference number: 6 (lower is better)
Translates to: RYGQRHRFLICQ*LGDSRVLLITQ
Trigger: CTGAGTAATGAGAAGCACCCTTGAGTCACCAAGGCACTGGCATATCAAAAAGCGGTGCCGCTGTCCATATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS GCA 72 bp TCGTCAAGATATGGACAGCGGCACCGCTTTTTGATATaGCAGTGCCTTGGTGACTCAAGGGTGCTTCTCATT +
Preference number: 6 (lower is better)
Translates to: SSRYGQRHRFLI*QCLGDSRVLLI
Trigger: AATGAGAAGCACCCTTGAGTCACCAAGGCACTGGCATATCAAAAAGCGGTGCCGCTGTCCATATCTTGACGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS CAA 72 bp AAGTGCGTGTCTTCAAGTCGTGCATACAAACAGCACTaGATGGCCCGCACTGGACAATATCCACACTTCCAC +
Preference number: 6 (lower is better)
Translates to: KCVSSSRAYKQH*MARTGQYPHFH
Trigger: GTGGAAGTGTGGATATTGTCCAGTGCGGGCCATCAAGTGCTGTTTGTATGCACGACTTGAAGACACGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS CAA 72 bp GAAGGCAATGCTGCTCTGGACTCTGTGATTTGTGCCTaGCTGGTCACAGCTCACTGTTGTGTTGAATTCCAG +
Preference number: 6 (lower is better)
Translates to: EGNAALDSVICA*LVTAHCCVEFQ
Trigger: CTGGAATTCAACACAACAGTGAGCTGTGACCAGCAAGGCACAAATCACAGAGTCCAGAGCAGCATTGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS CAA 72 bp CTACAATCGTCAAGATATGGACAGCGGCACCGCTTTTaGATATGCCAGTGCCTTGGTGACTCAAGGGTGCTT +
Preference number: 6 (lower is better)
Translates to: LQSSRYGQRHRF*ICQCLGDSRVL
Trigger: AAGCACCCTTGAGTCACCAAGGCACTGGCATATCAAAAAGCGGTGCCGCTGTCCATATCTTGACGATTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS TCA 72 bp CAGAGAAATGCACGCCTTCAGCTTCAATGCACCCAGTaGCATTCTGCAATCCCCAGATCCAAACTCTACCAT +
Preference number: 6 (lower is better)
Translates to: QRNARLQLQCTQ*HSAIPRSKLYH
Trigger: ATGGTAGAGTTTGGATCTGGGGATTGCAGAATGTCACTGGGTGCATTGAAGCTGAAGGCGTGCATTTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS GCA 72 bp CAAAGAGGAGGGGCTGAACTCCAGCGCACACTTACCTaGGGTTTTATTGCACTCAAAGTTTATGACGCTCAT +
Preference number: 6 (lower is better)
Translates to: QRGGAELQRTLT*GFIALKVYDAH
Trigger: ATGAGCGTCATAAACTTTGAGTGCAATAAAACCGCAGGTAAGTGTGCGCTGGAGTTCAGCCCCTCCTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS CCA 72 bp ATAAAAGCAACCGCCTTCCCCAGAAGTTCTCAACACTaGTGCACTTTCCAGATCACCTGGCTTGCATACAAG +
Preference number: 6 (lower is better)
Translates to: IKATAFPRSSQH*CTFQITWLAYK
Trigger: CTTGTATGCAAGCCAGGTGATCTGGAAAGTGCACCAGTGTTGAGAACTTCTGGGGAAGGCGGTTGCTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS CAA 90 bp CAACTGTGTCTACAATCGTCAAGATATGGACAGCGGCACCGCTTTTaGATATGCCAGTGCCTTGGTGACTCAAGGGTGCTTCTCATTACT +
Preference number: 6 (lower is better)
Translates to: QLCLQSSRYGQRHRF*ICQCLGDSRVLLIT
Trigger: AGTAATGAGAAGCACCCTTGAGTCACCAAGGCACTGGCATATCAAAAAGCGGTGCCGCTGTCCATATCTTGACGATTGTAGACACAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS TCA 72 bp AATTTATTTGTAGAGAAATGCTGGGACACAGGAAAGTaGCTTCAAGCTTCCAGAGACGGCGCTGCAGGAAGG +
Preference number: 6 (lower is better)
Translates to: NLFVEKCWDTGK*LQASRDGAAGR
Trigger: CCTTCCTGCAGCGCCGTCTCTGGAAGCTTGAAGTCACTTTCCTGTGTCCCAGCATTTCTCTACAAATAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475584.1
CDS CCA 72 bp TCTACAGCTACAACTGTGTCTACAATCGTCAAGATATaGACAGCGGCACCGCTTTTTGATATGCCAGTGCCT +
Preference number: 6 (lower is better)
Translates to: STATTVSTIVKI*TAAPLFDMPVP
Trigger: AGGCACTGGCATATCAAAAAGCGGTGCCGCTGTCCATATCTTGACGATTGTAGACACAGTTGTAGCTGTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS CAA 90 bp TGGAGGAAGTTAAATGTGGAACTTTGTGGGAAGCCACGGATTACCTaGAAGGTAGTACTTGGTCTTGTCAGAGGTTCCAACTTTCCGACT +
Preference number: 6 (lower is better)
Translates to: WRKLNVELCGKPRIT*KVVLGLVRGSNFPT
Trigger: AGTCGGAAAGTTGGAACCTCTGACAAGACCAAGTACTACCTTCAAGGTAATCCGTGGCTTCCCACAAAGTTCCACATTTAACTTCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS CAA 90 bp CCCAAATCTCCTCTTGGCACCGCTGGTTTAGACAACTCACTTCATTaGAACTGCAGTTACGCAGAATGCAGAAATACGCACAGAGATATC +
Preference number: 6 (lower is better)
Translates to: PKSPLGTAGLDNSLH*NCSYAECRNTHRDI
Trigger: GATATCTCTGTGCGTATTTCTGCATTCTGCGTAACTGCAGTTCAAATGAAGTGAGTTGTCTAAACCAGCGGTGCCAAGAGGAGATTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676781.1
CDS TCA 72 bp ATCGGAGGGTCTGATTGTGGTATCTTCCTGCTGCTTTaGCTTGAGAGGTATCGCTCTTTTTCACTTGGCAAA +
Preference number: 6 (lower is better)
Translates to: IGGSDCGIFLLL*LERYRSFSLGK
Trigger: TTTGCCAAGTGAAAAAGAGCGATACCTCTCAAGTCAAAGCAGCAGGAAGATACCACAATCAGACCCTCCGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000649737.1
ENST00000676781.1
ENST00000677704.1
CDS TCA 72 bp CTGAGCTGCATTCATCACCTCCAAAATATATCAAGGTaGGGTCTCCATCCGAATATCGGAGGGTCTGATTGT +
Preference number: 6 (lower is better)
Translates to: LSCIHHLQNISR*GLHPNIGGSDC
Trigger: ACAATCAGACCCTCCGATATTCGGATGGAGACCTCACCTTGATATATTTTGGAGGTGATGAATGCAGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000649737.1
ENST00000676781.1
ENST00000677704.1
CDS TCA 72 bp CATCGTTACCTGCGGTTTTATTGCACTCAAAGTTTATaGCGCTCATCCGCTGAAACCCTGAGCTGCATTCAT +
Preference number: 6 (lower is better)
Translates to: HRYLRFYCTQSL*RSSAETLSCIH
Trigger: ATGAATGCAGCTCAGGGTTTCAGCGGATGAGCGTCATAAACTTTGAGTGCAATAAAACCGCAGGTAACGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356956.6
ENST00000676781.1
ENST00000677704.1
CDS TCA 72 bp CACACTTACCTGCGGTTTTATTGCACTCAAAGTTTATaGCGCTCATCCGCTGAAACCCTGAGCTGCATTCAT +
Preference number: 6 (lower is better)
Translates to: HTYLRFYCTQSL*RSSAETLSCIH
Trigger: ATGAATGCAGCTCAGGGTTTCAGCGGATGAGCGTCATAAACTTTGAGTGCAATAAAACCGCAGGTAAGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS GCA 72 bp ATCCGAATATCGGAGGGTCTGATTGTGGTATCTTCCTaGTGCTTTGACTTGAGAGGTATCGCTCTTTTTCAC +
Preference number: 6 (lower is better)
Translates to: IRISEGLIVVSS*CFDLRGIALFH
Trigger: GTGAAAAAGAGCGATACCTCTCAAGTCAAAGCAGCAGGAAGATACCACAATCAGACCCTCCGATATTCGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000649737.1
ENST00000676781.1
ENST00000677704.1
CDS GCA 72 bp AAACCTAGTTCAAGAGACAAGCTAGCCCAGAGAAGTTaGACTGGTCTTGTAACAGTGTCTCAGCACTGTATC +
Preference number: 6 (lower is better)
Translates to: KPSSRDKLAQRS*TGLVTVSQHCI
Trigger: GATACAGTGCTGAGACACTGTTACAAGACCAGTGCAACTTCTCTGGGCTAGCTTGTCTCTTGAACTAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS GCA 72 bp GCAAACAGTGTTCTCCCAACGCAGGGAACAGTGTTCTaGGCATGTCTATTAAATCTTGCTTTTCACTGTGCT +
Preference number: 6 (lower is better)
Translates to: ANSVLPTQGTVF*ACLLNLAFHCA
Trigger: AGCACAGTGAAAAGCAAGATTTAATAGACATGCGCAGAACACTGTTCCCTGCGTTGGGAGAACACTGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678224.1
CDS CCA 72 bp CAATTTCTGAGTCACCCCTTTTCCAAACTCAGCGTCTaGAAGGAATCAGTTCTGTTCACAAACAGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: QFLSHPFSKLSV*KESVLFTNSSS
Trigger: TGAGCTGCTGTTTGTGAACAGAACTGATTCCTTCCAGACGCTGAGTTTGGAAAAGGGGTGACTCAGAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS TCA 72 bp GCACTCAAAGTTTATGACGCTCATCCGCTGAAACCCTaGGCTGCATTCATCACCTCCAAAATATATCAAGGT +
Preference number: 6 (lower is better)
Translates to: ALKVYDAHPLKP*AAFITSKIYQG
Trigger: ACCTTGATATATTTTGGAGGTGATGAATGCAGCTCAGGGTTTCAGCGGATGAGCGTCATAAACTTTGAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000649737.1
ENST00000676781.1
ENST00000677704.1
CDS CAA 72 bp TTAAATGTGGAACTTTGTGGGAAGCCACGGATTACCTaGAAGGTAGTACTTGGTCTTGTCAGAGGTTCCAAC +
Preference number: 6 (lower is better)
Translates to: LNVELCGKPRIT*KVVLGLVRGSN
Trigger: GTTGGAACCTCTGACAAGACCAAGTACTACCTTCAAGGTAATCCGTGGCTTCCCACAAAGTTCCACATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475834.2
CDS CAA 72 bp GCCCTTCTCATATCCTGCTCGTCCATTTCGATCTTTTaGGATAATGATTCTGTCTTCCCAGCATCCCCAAAT +
Preference number: 6 (lower is better)
Translates to: ALLISCSSISIF*DNDSVFPASPN
Trigger: ATTTGGGGATGCTGGGAAGACAGAATCATTATCCAAAAAGATCGAAATGGACGAGCAGGATATGAGAAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS CAA 90 bp CGATATAATGCCCTTCTCATATCCTGCTCGTCCATTTCGATCTTTTaGGATAATGATTCTGTCTTCCCAGCATCCCCAAATGAGATCAGC +
Preference number: 6 (lower is better)
Translates to: RYNALLISCSSISIF*DNDSVFPASPNEIS
Trigger: GCTGATCTCATTTGGGGATGCTGGGAAGACAGAATCATTATCCAAAAAGATCGAAATGGACGAGCAGGATATGAGAAGGGCATTATATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS TCA 72 bp TCAGACTCATACATTCATAAATCCTTTGGCAATTTCTaGGTCACCCCTTTTCCAAACTCAGCGTCTGGAAGG +
Preference number: 6 (lower is better)
Translates to: SDSYIHKSFGNF*VTPFPNSASGR
Trigger: CCTTCCAGACGCTGAGTTTGGAAAAGGGGTGACTCAGAAATTGCCAAAGGATTTATGAATGTATGAGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650503.1
CDS TCA 72 bp CTCAAAGATCTCGGCCAAGTCATTAATAAAAAGCCCTaGACAGAACAGGCCAAAGGAGGTCATCACAAAGTT +
Preference number: 6 (lower is better)
Translates to: LKDLGQVINKKP*TEQAKGGHHKV
Trigger: AACTTTGTGATGACCTCCTTTGGCCTGTTCTGTTCAGGGCTTTTTATTAATGACTTGGCCGAGATCTTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS TCA 72 bp GTTTTATTGCACTCAAAGTTTATGACGCTCATCCGCTaGAACCCTGAGCTGCATTCATCACCTCCAAAATAT +
Preference number: 6 (lower is better)
Translates to: VLLHSKFMTLIR*NPELHSSPPKY
Trigger: ATATTTTGGAGGTGATGAATGCAGCTCAGGGTTTCAGCGGATGAGCGTCATAAACTTTGAGTGCAATAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356956.6
ENST00000649737.1
ENST00000676781.1
ENST00000677704.1
CDS TCA 72 bp TCTCATTCACGAGTCAGATGTATGTCATACCCCTGCTaGAAATCCTTGGGACTTCACAGATTTCCAGATATA +
Preference number: 6 (lower is better)
Translates to: SHSRVRCMSYPC*KSLGLHRFPDI
Trigger: TATATCTGGAAATCTGTGAAGTCCCAAGGATTTTCAGCAGGGGTATGACATACATCTGACTCGTGAATGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS TCA 72 bp TCTTATTTCCACCACACGGATAACCTTTGGAGTACGTaGCAACAACTTTGTCACCTGAAACACACAAATGAT +
Preference number: 6 (lower is better)
Translates to: SYFHHTDNLWST*QQLCHLKHTND
Trigger: ATCATTTGTGTGTTTCAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTATCCGTGTGGTGGAAATAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677628.1
CDS CAA 72 bp AGCAGACTGAGCTTAGCTCCTTACGGTCTAAAAAGTTaGCAAAGACTTAAAATCAGGCAGAAGAGACTTCAT +
Preference number: 6 (lower is better)
Translates to: SRLSLAPYGLKS*QRLKIRQKRLH
Trigger: ATGAAGTCTCTTCTGCCTGATTTTAAGTCTTTGCAAACTTTTTAGACCGTAAGGAGCTAAGCTCAGTCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569097.2
CDS GCA 72 bp TCCCCAGATCCAAACTCTACCATAGGGTCACCACTTTaGAAAAAGGATTATCTTGATACTCATTACATAAAA +
Preference number: 6 (lower is better)
Translates to: SPDPNSTIGSPL*KKDYLDTHYIK
Trigger: TTTTATGTAATGAGTATCAAGATAATCCTTTTTGCAAAGTGGTGACCCTATGGTAGAGTTTGGATCTGGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS GCA 72 bp GTAAGTCTGAAACGATATAATGCCCTTCTCATATCCTaGTCGTCCATTTCGATCTTTTTGGATAATGATTCT +
Preference number: 6 (lower is better)
Translates to: VSLKRYNALLIS*SSISIFLDNDS
Trigger: AGAATCATTATCCAAAAAGATCGAAATGGACGAGCAGGATATGAGAAGGGCATTATATCGTTTCAGACTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS TCA 72 bp TACCATAGGGTCACCACTTTGCAAAAAGGATTATCTTaGTACTCATTACATAAAAGAAGAGGTCACTCAATC +
Preference number: 6 (lower is better)
Translates to: YHRVTTLQKGLS*YSLHKRRGHSI
Trigger: GATTGAGTGACCTCTTCTTTTATGTAATGAGTATCAAGATAATCCTTTTTGCAAAGTGGTGACCCTATGGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649737.1
CDS TCA 72 bp ATAACCTTTGGAGTACGTGACAACAACTTTGTCACCTaGAACACACAAATGATTGAACTGACATTATTTCTA +
Preference number: 6 (lower is better)
Translates to: ITFGVRDNNFVT*NTQMIELTLFL
Trigger: TAGAAATAATGTCAGTTCAATCATTTGTGTGTTTCAGGTGACAAAGTTGTTGTCACGTACTCCAAAGGTTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677628.1