Pregenerated sensors for IGF2BP3 (Homo sapiens)
Ensembl gene IDs: ENSG00000136231Ensembl transcript IDs: ENST00000468005.1, ENST00000474105.5, ENST00000491719.5, ENST00000498363.1
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CACTCTCTCCTCCCACAGGGTGGGGAGGAAGCGCGGGGCCGCCTGTaGGAGGCACCAGCCTCGCGGTCTCACTCGGCAGCACGGTCGAGG | + |
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Preference number: 5 (lower is better) Translates to: HSLLPQGGEEARGRL*EAPASRSHSAARSR Trigger: CCTCGACCGTGCTGCCGAGTGAGACCGCGAGGCTGGTGCCTCGCACAGGCGGCCCCGCGCTTCCTCCCCACCCTGTGGGAGGAGAGAGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491719.5 |
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| CDS CCA 90 bp | AGGTGGAACGGGGAAACCGGGCACACACTCTCTCCTCCCACAGGGTaGGGAGGAAGCGCGGGGCCGCCTGTGCGAGGCACCAGCCTCGCG | + |
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Preference number: 5 (lower is better) Translates to: RWNGETGHTLSPPTG*GGSAGPPVRGTSLA Trigger: CGCGAGGCTGGTGCCTCGCACAGGCGGCCCCGCGCTTCCTCCCCACCCTGTGGGAGGAGAGAGTGTGTGCCCGGTTTCCCCGTTCCACCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491719.5 |
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| CDS CCA 90 bp | GTGGCATCTGAACATCCACATCGTTGTCTGCTGGGACTGTTTCTGTaGAGGAATCCTTCCAGTCTGGTCACACTGAGTCTACTCTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: VASEHPHRCLLGLFL*RNPSSLVTLSLLFR Trigger: CCTGAAGAGTAGACTCAGTGTGACCAGACTGGAAGGATTCCTCCACAGAAACAGTCCCAGCAGACAACGATGTGGATGTTCAGATGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468005.1 |
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| CDS TCA 90 bp | TGCTGGGACTGTTTCTGTGGAGGAATCCTTCCAGTCTGGTCACACTaGGTCTACTCTTCAGGTACCTCAGGCAAAACAGGATGGATGAGA | + |
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Preference number: 5 (lower is better) Translates to: CWDCFCGGILPVWSH*VYSSGTSGKTGWMR Trigger: TCTCATCCATCCTGTTTTGCCTGAGGTACCTGAAGAGTAGACTCAGTGTGACCAGACTGGAAGGATTCCTCCACAGAAACAGTCCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468005.1 |
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| CDS TCA 90 bp | GGGCTCTCAAATCCTCCTTCTAATGTACACTTCCCCTGTGGCATCTaGACATCCACATCGTTGTCTGCTGGGACTGTTTCTGTGGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: GLSNPPSNVHFPCGI*TSTSLSAGTVSVEE Trigger: TTCCTCCACAGAAACAGTCCCAGCAGACAACGATGTGGATGTTCAGATGCCACAGGGGAAGTGTACATTAGAAGGAGGATTTGAGAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468005.1 |
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| CDS TCA 90 bp | GGTGCTTCCGCTGGAGCAATCTGTAACAGACCCAACAACAAGTTATaGTACTTTCAGGTATCACTGATAGGCATCTTGGGCCAACCAGCC | + |
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Preference number: 5 (lower is better) Translates to: GASAGAICNRPNNKL*YFQVSLIGILGQPA Trigger: GGCTGGTTGGCCCAAGATGCCTATCAGTGATACCTGAAAGTATCATAACTTGTTGTTGGGTCTGTTACAGATTGCTCCAGCGGAAGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498363.1 |
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| CDS CCA 72 bp | GGGGAAACCGGGCACACACTCTCTCCTCCCACAGGGTaGGGAGGAAGCGCGGGGCCGCCTGTGCGAGGCACC | + |
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Preference number: 6 (lower is better) Translates to: GETGHTLSPPTG*GGSAGPPVRGT Trigger: GGTGCCTCGCACAGGCGGCCCCGCGCTTCCTCCCCACCCTGTGGGAGGAGAGAGTGTGTGCCCGGTTTCCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491719.5 |
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| CDS CAA 72 bp | GGGAGGCCAAGGCGGGCAGATCACAAGGTCAAGAGATaGAAACCATCCCGGCTAACAATGAAACCCCGTCTC | + |
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Preference number: 6 (lower is better) Translates to: GRPRRADHKVKR*KPSRLTMKPRL Trigger: GAGACGGGGTTTCATTGTTAGCCGGGATGGTTTCAATCTCTTGACCTTGTGATCTGCCCGCCTTGGCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468005.1 |
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| CDS CCA 72 bp | CCCCTGTGGCATCTGAACATCCACATCGTTGTCTGCTaGGACTGTTTCTGTGGAGGAATCCTTCCAGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: PLWHLNIHIVVC*DCFCGGILPVW Trigger: CCAGACTGGAAGGATTCCTCCACAGAAACAGTCCCAGCAGACAACGATGTGGATGTTCAGATGCCACAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468005.1 |
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| CDS GCA 72 bp | CTTCCCCTGTGGCATCTGAACATCCACATCGTTGTCTaGTGGGACTGTTTCTGTGGAGGAATCCTTCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: LPLWHLNIHIVV*WDCFCGGILPV Trigger: GACTGGAAGGATTCCTCCACAGAAACAGTCCCAGCAGACAACGATGTGGATGTTCAGATGCCACAGGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468005.1 |
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| CDS CCA 72 bp | GAACATCCACATCGTTGTCTGCTGGGACTGTTTCTGTaGAGGAATCCTTCCAGTCTGGTCACACTGAGTCTA | + |
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Preference number: 6 (lower is better) Translates to: EHPHRCLLGLFL*RNPSSLVTLSL Trigger: TAGACTCAGTGTGACCAGACTGGAAGGATTCCTCCACAGAAACAGTCCCAGCAGACAACGATGTGGATGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468005.1 |
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| CDS CCA 72 bp | ACAAAGGAGGTGATGGGAGTAAAACATTTGAGCATTTaGCCAGGAAGAGGGGAACTTACACCTTCCACGGGA | + |
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Preference number: 6 (lower is better) Translates to: TKEVMGVKHLSI*PGRGELTPSTG Trigger: TCCCGTGGAAGGTGTAAGTTCCCCTCTTCCTGGCCAAATGCTCAAATGTTTTACTCCCATCACCTCCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474105.5 |
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| CDS CAA 72 bp | AACAAAGGAGGTGATGGGAGTAAAACATTTGAGCATTaGGCCAGGAAGAGGGGAACTTACACCTTCCACGGG | + |
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Preference number: 6 (lower is better) Translates to: NKGGDGSKTFEH*ARKRGTYTFHG Trigger: CCCGTGGAAGGTGTAAGTTCCCCTCTTCCTGGCCAAATGCTCAAATGTTTTACTCCCATCACCTCCTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474105.5 |
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| CDS TCA 72 bp | AATCCTCCTTCTAATGTACACTTCCCCTGTGGCATCTaGACATCCACATCGTTGTCTGCTGGGACTGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: NPPSNVHFPCGI*TSTSLSAGTVS Trigger: AGAAACAGTCCCAGCAGACAACGATGTGGATGTTCAGATGCCACAGGGGAAGTGTACATTAGAAGGAGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468005.1 |
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| CDS GCA 72 bp | CAGATCTTACAAAACACCAAACGTCACAAGCGTTTCTaGTGTGGTCCCAGATTCTGTTACCTCTTCAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: QILQNTKRHKRF*CGPRFCYLFSD Trigger: GTCACTGAAGAGGTAACAGAATCTGGGACCACAGCAGAAACGCTTGTGACGTTTGGTGTTTTGTAAGATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468005.1 |
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| CDS TCA 72 bp | GCTGGAGCAATCTGTAACAGACCCAACAACAAGTTATaGTACTTTCAGGTATCACTGATAGGCATCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: AGAICNRPNNKL*YFQVSLIGILG Trigger: GCCCAAGATGCCTATCAGTGATACCTGAAAGTATCATAACTTGTTGTTGGGTCTGTTACAGATTGCTCCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498363.1 |
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| CDS GCA 72 bp | AACTGTTTAAAGCTGCTTGACACAGCATGTAAGATATaGGGTCCAGAGAACTTGAGGAATCCCCTTCTGATC | + |
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Preference number: 6 (lower is better) Translates to: NCLKLLDTACKI*GPENLRNPLLI Trigger: GATCAGAAGGGGATTCCTCAAGTTCTCTGGACCGCATATCTTACATGCTGTGTCAAGCAGCTTTAAACAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468005.1 |
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