RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGF2BP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000159217

Ensembl transcript IDs: ENST00000290341.8, ENST00000431824.2, ENST00000499130.6, ENST00000505562.1, ENST00000510023.5, ENST00000515586.5

Found 402 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCTGGGATCGCCCAGTGGAACTCCCCCAACTACAAAGACGGCCTaGATGAGTCCAAGGACCGCGCCCTCAGACTCCCCCAGGGCAAAG +
Preference number: 1 (lower is better)
Translates to: GLGSPSGTPPTTKTA*MSPRTAPSDSPRAK
Trigger: CTTTGCCCTGGGGGAGTCTGAGGGCGCGGTCCTTGGACTCATTCAGGCCGTCTTTGTAGTTGGGGGAGTTCCACTGGGCGATCCCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CCA 90 bp ACAACCCCTGCCTCTAGGAACCAGCCCTTATGGGAGCACATGGGCTaGGGTGAGGGCACCGTGGCAGCCTTTGGGGCCACTCAAGTCCTC +
Preference number: 1 (lower is better)
Translates to: TTPASRNQPLWEHMG*GEGTVAAFGATQVL
Trigger: GAGGACTTGAGTGGCCCCAAAGGCTGCCACGGTGCCCTCACCCCAGCCCATGTGCTCCCATAAGGGCTGGTTCCTAGAGGCAGGGGTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CCA 90 bp GCCAAACAAGGCTCTGGGCTCTGCCCCTCTGGGCTCTCTCAAACCTaGGCCTTCCCTCTTAGCACTAGCCTCCTCCTAAGGGGGCAGCCC +
Preference number: 1 (lower is better)
Translates to: AKQGSGLCPSGLSQT*AFPLSTSLLLRGQP
Trigger: GGGCTGCCCCCTTAGGAGGAGGCTAGTGCTAAGAGGGAAGGCCCAGGTTTGAGAGAGCCCAGAGGGGCAGAGCCCAGAGCCTTGTTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR GCA 90 bp TACAGCCCGGCCCAGGTGTCCCGGATTCCCACTCATTCTCAGGCCTaGCGGGGAGAGCACACTCTCGATTTCTGCCCGTTGTTGTCCTGG +
Preference number: 1 (lower is better)
Translates to: YSPAQVSRIPTHSQA*RGEHTLDFCPLLSW
Trigger: CCAGGACAACAACGGGCAGAAATCGAGAGTGTGCTCTCCCCGGCAGGCCTGAGAATGAGTGGGAATCCGGGACACCTGGGCCGGGCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 90 bp TGGGATCGCCCAGTGGAACTCCCCCAACTACAAAGACGGCCTGAATaGGTCCAAGGACCGCGCCCTCAGACTCCCCCAGGGCAAAGGATC +
Preference number: 1 (lower is better)
Translates to: WDRPVELPQLQRRPE*VQGPRPQTPPGQRI
Trigger: GATCCTTTGCCCTGGGGGAGTCTGAGGGCGCGGTCCTTGGACTCATTCAGGCCGTCTTTGTAGTTGGGGGAGTTCCACTGGGCGATCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CCA 90 bp GTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTACCCCTTaGCTTGGCAAACACCACACCCTAATCCCCCAGGAGCCTCTGAAG +
Preference number: 1 (lower is better)
Translates to: VQPGADRPISRLPTP*LGKHHTLIPQEPLK
Trigger: CTTCAGAGGCTCCTGGGGGATTAGGGTGTGGTGTTTGCCAAGCCAAGGGGTAGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CCA 90 bp GCTGAGAGATCAGGGTTCCTCACTGGAACATCTTTCTCAATCAAGTaGGCAAACCTGATCTACAGCCCGGCCCAGGTGTCCCGGATTCCC +
Preference number: 1 (lower is better)
Translates to: AERSGFLTGTSFSIK*ANLIYSPAQVSRIP
Trigger: GGGAATCCGGGACACCTGGGCCGGGCTGTAGATCAGGTTTGCCCACTTGATTGAGAAAGATGTTCCAGTGAGGAACCCTGATCTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 90 bp CAGGGTTCCTCACTGGAACATCTTTCTCAATCAAGTGGGCAAACCTaGTCTACAGCCCGGCCCAGGTGTCCCGGATTCCCACTCATTCTC +
Preference number: 1 (lower is better)
Translates to: QGSSLEHLSQSSGQT*STARPRCPGFPLIL
Trigger: GAGAATGAGTGGGAATCCGGGACACCTGGGCCGGGCTGTAGATCAGGTTTGCCCACTTGATTGAGAAAGATGTTCCAGTGAGGAACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 90 bp CCGAGGGGCAGACAGTGTTGGGCCAATTGGGTGGGTGTTTGGGGCTaGGAGATCAGGGTTCCTCACTGGAACATCTTTCTCAATCAAGTG +
Preference number: 1 (lower is better)
Translates to: PRGRQCWANWVGVWG*EIRVPHWNIFLNQV
Trigger: CACTTGATTGAGAAAGATGTTCCAGTGAGGAACCCTGATCTCTCAGCCCCAAACACCCACCCAATTGGCCCAACACTGTCTGCCCCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 90 bp CTGGGAGCTGAATCAGCCAACGGAAAAGGACTTGGGCTCAAGGTGTaGAGGGAGCAGGCCCCCAAGGAAACTGAACACTGCAACAATCAC +
Preference number: 1 (lower is better)
Translates to: LGAESANGKGLGLKV*REQAPKETEHCNNH
Trigger: GTGATTGTTGCAGTGTTCAGTTTCCTTGGGGGCCTGCTCCCTTCACACCTTGAGCCCAAGTCCTTTTCCGTTGGCTGATTCAGCTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 90 bp GTTTTCCAGTCCCTTGCCACACACTTCCTCGTCTCTTCTGGGAGCTaGATCAGCCAACGGAAAAGGACTTGGGCTCAAGGTGTGAAGGGA +
Preference number: 1 (lower is better)
Translates to: VFQSLATHFLVSSGS*ISQRKRTWAQGVKG
Trigger: TCCCTTCACACCTTGAGCCCAAGTCCTTTTCCGTTGGCTGATTCAGCTCCCAGAAGAGACGAGGAAGTGTGTGGCAAGGGACTGGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CCA 90 bp TACACGGGAGAGGGACATGAATGTGGTGGGGAAGCCCCAACAGAGTaGGGAAATTTCAGTTGTGCCAATTTGAAGATGGTGATCTGGCAT +
Preference number: 1 (lower is better)
Translates to: YTGEGHECGGEAPTE*GNFSCANLKMVIWH
Trigger: ATGCCAGATCACCATCTTCAAATTGGCACAACTGAAATTTCCCCACTCTGTTGGGGCTTCCCCACCACATTCATGTCCCTCTCCCGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CCA 90 bp GTTGTTACTGTTGTTGCAATGTTGAAAGGAGGGGAACTCCACGCATaGGCTTTTCCATATGTAGAGAGGCCTTCCTCCCTTCCCAGCACA +
Preference number: 1 (lower is better)
Translates to: VVTVVAMLKGGELHA*AFPYVERPSSLPST
Trigger: TGTGCTGGGAAGGGAGGAAGGCCTCTCTACATATGGAAAAGCCCATGCGTGGAGTTCCCCTCCTTTCAACATTGCAACAACAGTAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 90 bp GGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCAAGTaGAGTTTTCCAGTCCCTTGCCACACACTTCCTCGTCTCTTCTGG +
Preference number: 1 (lower is better)
Translates to: GQISTMSGALPNPSK*SFPVPCHTLPRLFW
Trigger: CCAGAAGAGACGAGGAAGTGTGTGGCAAGGGACTGGAAAACTTCACTTGCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR GCA 90 bp CCTGACTACGCCCACATGTTGCGGTTGTCTTGTTGTTACTGTTGTTaGAATGTTGAAAGGAGGGGAACTCCACGCATGGGCTTTTCCATA +
Preference number: 1 (lower is better)
Translates to: PDYAHMLRLSCCYCC*NVERRGTPRMGFSI
Trigger: TATGGAAAAGCCCATGCGTGGAGTTCCCCTCCTTTCAACATTGCAACAACAGTAACAACAAGACAACCGCAACATGTGGGCGTAGTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 90 bp GTAACTTCATACCTTGAGGTAGTTTACTTCGCACACAGCATTGCCTaGCTACGCCCACATGTTGCGGTTGTCTTGTTGTTACTGTTGTTG +
Preference number: 1 (lower is better)
Translates to: VTSYLEVVYFAHSIA*LRPHVAVVLLLLLL
Trigger: CAACAACAGTAACAACAAGACAACCGCAACATGTGGGCGTAGTCAGGCAATGCTGTGTGCGAAGTAAACTACCTCAAGGTATGAAGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 90 bp ATTGTCAATCAGTATATTAGGAGGAGAGGCCTAACCTCATTTAACTaGTGGCTTCTGTCTCCCACAAGGGCTAAACACTCCATGGGATCT +
Preference number: 1 (lower is better)
Translates to: IVNQYIRRRGLTSFN*WLLSPTRAKHSMGS
Trigger: AGATCCCATGGAGTGTTTAGCCCTTGTGGGAGACAGAAGCCATCAGTTAAATGAGGTTAGGCCTCTCCTCCTAATATACTGATTGACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 90 bp GGTGGTATAACTTACATGATTTTCCTGCTGGGCAAATATCAACAATaGGTGGAGCCTTGCCTAATCCAAGCAAGTGAAGTTTTCCAGTCC +
Preference number: 1 (lower is better)
Translates to: GGITYMIFLLGKYQQ*VEPCLIQASEVFQS
Trigger: GGACTGGAAAACTTCACTTGCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATCATGTAAGTTATACCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CCA 90 bp ACAGAGTGGGGAAATTTCAGTTGTGCCAATTTGAAGATGGTGATCTaGCATAGATCAGCCACAAGTGCGCTCCTTTTAAACGTGGATTAT +
Preference number: 1 (lower is better)
Translates to: TEWGNFSCANLKMVI*HRSATSALLLNVDY
Trigger: ATAATCCACGTTTAAAAGGAGCGCACTTGTGGCTGATCTATGCCAGATCACCATCTTCAAATTGGCACAACTGAAATTTCCCCACTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 90 bp ATACAAACAGAAGCAAGTACTCTCCAATTTACTGAATTTGCCAGATaGTGGACTTTAGCTTTATCGGGAGCTCAGGGTTGGGTTCCAAGT +
Preference number: 1 (lower is better)
Translates to: IQTEASTLQFTEFAR*WTLALSGAQGWVPS
Trigger: ACTTGGAACCCAACCCTGAGCTCCCGATAAAGCTAAAGTCCATCATCTGGCAAATTCAGTAAATTGGAGAGTACTTGCTTCTGTTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 90 bp AAATTCCTCTCAGATACAAACAGAAGCAAGTACTCTCCAATTTACTaGATTTGCCAGATGATGGACTTTAGCTTTATCGGGAGCTCAGGG +
Preference number: 1 (lower is better)
Translates to: KFLSDTNRSKYSPIY*ICQMMDFSFIGSSG
Trigger: CCCTGAGCTCCCGATAAAGCTAAAGTCCATCATCTGGCAAATTCAGTAAATTGGAGAGTACTTGCTTCTGTTTGTATCTGAGAGGAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCAGGCCAAACAAGGCTCTaGGCTCTGCCCCTCTGGGCT +
Preference number: 2 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPGQTRL*ALPLWA
Trigger: AGCCCAGAGGGGCAGAGCCCAGAGCCTTGTTTGGCC...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACGGGGTGAGGGCACCGTaGCAGCCTTTGGGGCCACTC +
Preference number: 2 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNGVRAP*QPLGPL
Trigger: GAGTGGCCCCAAAGGCTGCCACGGTGCCCTCACCCC...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR TCA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTCCAGGTGGACCTCTCTaGGGGCGAGAGGGTGGCCTT +
Preference number: 2 (lower is better)
Translates to: LSFPKVQPGADRPISRLPPGGPL*GREGGL
Trigger: AAGGCCACCCTCTCGCCCTCAGAGAGGTCCACCTGG...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR GCA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTTGCCGTGGCTGGGAGTaGCCCACAACCCCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: LSFPKVQPGADRPISRLPCRGWE*PTTPAS
Trigger: AGAGGCAGGGGTTGTGGGGCACTCCCAGCCACGGCA...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR GCA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCACTTCGCACACAGCATTaGCTGACTACGCCCACATGT +
Preference number: 2 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPLRTQH*LTTPTC
Trigger: ACATGTGGGCGTAGTCAGGCAATGCTGTGTGCGAAG...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR TCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCAGCACATGGGCTGGGGTaGGGGCACCGTGGCAGCCTT +
Preference number: 2 (lower is better)
Translates to: GATRECPREKMIRQEPVPAHGLG*GHRGSL
Trigger: AAGGCTGCCACGGTGCCCTCACCCCAGCCCATGTGC...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCAGGAACCAGCCCTTATaGGAGCACATGGGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESRNQPL*EHMGWG
Trigger: ACCCCAGCCCATGTGCTCCCATAAGGGCTGGTTCCT...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR TCA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCAGTCTCTTCTGGGAGCTaGATCAGCCAACGGAAAAGG +
Preference number: 2 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSVSSGS*ISQRKR
Trigger: CCTTTTCCGTTGGCTGATTCAGCTCCCAGAAGAGAC...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTAGGGGCAGACAGTGTTaGGCCAATTGGGTGGGTGTT +
Preference number: 2 (lower is better)
Translates to: LSFPKVQPGADRPISRLPRGRQC*ANWVGV
Trigger: AACACCCACCCAATTGGCCCAACACTGTCTGCCCCT...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCGATCCACCCTCTTGGTaGGGCCTGGAGAGCTTCTTT +
Preference number: 2 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESDPPSW*GLESFF
Trigger: AAAGAAGCTCTCCAGGCCCCACCAAGAGGGTGGATC...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTTGGGAGCACATGGGCTaGGGTGAGGGCACCGTGGCA +
Preference number: 2 (lower is better)
Translates to: RKLAIALIQEQPLSASVCWEHMG*GEGTVA
Trigger: TGCCACGGTGCCCTCACCCCAGCCCATGTGCTCCCA...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CAA 90 bp CTTCCTCGTCTCTTCTGGGAGCTGAATCAGCCAACGGAAAAGGACTaGGGCTCAAGGTGTGAAGGGAGCAGGCCCCCAAGGAAACTGAAC +
Preference number: 2 (lower is better)
Translates to: LPRLFWELNQPTEKD*GSRCEGSRPPRKLN
Trigger: GTTCAGTTTCCTTGGGGGCCTGCTCCCTTCACACCTTGAGCCCAAGTCCTTTTCCGTTGGCTGATTCAGCTCCCAGAAGAGACGAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR TCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACCAGCCCCTACCCTGCTaGGCATTCAATACCACCTAT +
Preference number: 2 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNQPLPC*AFNTTY
Trigger: ATAGGTGGTATTGAATGCTCAGCAGGGTAGGGGCTG...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR TCA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCAGGCCCCCAAGGAAACTaGACACTGCAACAATCACAT +
Preference number: 2 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSGPQGN*TLQQSH
Trigger: ATGTGATTGTTGCAGTGTTCAGTTTCCTTGGGGGCC...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCGGGAGACCCTTTTTATaGTTGGGACAGGTGGAGAGG +
Preference number: 2 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESGRPFL*LGQVER
Trigger: CCTCTCCACCTGTCCCAACCATAAAAAGGGTCTCCC...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR GCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCAACTCATTCTCAGGCCTaGCGGGGAGAGCACACTCTC +
Preference number: 2 (lower is better)
Translates to: GATRECPREKMIRQEPVPTHSQA*RGEHTL
Trigger: GAGAGTGTGCTCTCCCCGGCAGGCCTGAGAATGAGT...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCGAAGCCCCAACAGAGTaGGGAAATTTCAGTTGTGCC +
Preference number: 2 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESEAPTE*GNFSCA
Trigger: GGCACAACTGAAATTTCCCCACTCTGTTGGGGCTTC...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCGGGGAACTCCACGCATaGGCTTTTCCATATGTAGAG +
Preference number: 2 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESGELHA*AFPYVE
Trigger: CTCTACATATGGAAAAGCCCATGCGTGGAGTTCCCC...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCACAGGGAGACAGAGGTaGGGGCAGTTAACTAGTATC +
Preference number: 2 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESTGRQR*GQLTSI
Trigger: GATACTAGTTAACTGCCCCCACCTCTGTCTCCCTGT...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR TCA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGTCAAGTGGGCAAACCTaGTCTACAGCCCGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVSSGQT*STARPR
Trigger: CCTGGGCCGGGCTGTAGATCAGGTTTGCCCACTTGA...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR TCA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCATTAATCTACAGATACTaGCAGTTCTTTTCCCTTGAG +
Preference number: 2 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPLIYRY*QFFSLE
Trigger: CTCAAGGGAAAAGAACTGTCAGTATCTGTAGATTAA...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR TCA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCACTATTGGTTAGGGAGTaGTTGGAATTAATCTACAGA +
Preference number: 2 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPLLVRE*LELIYR
Trigger: TCTGTAGATTAATTCCAATCACTCCCTAACCAATAG...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR TCA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTGCACACAGCATTGCCTaGCTACGCCCACATGTTGCG +
Preference number: 2 (lower is better)
Translates to: RKLAIALIQEQPLSASVCAHSIA*LRPHVA
Trigger: CGCAACATGTGGGCGTAGTCAGGCAATGCTGTGTGC...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR GCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCGGTGTAACTGGCAGATaGAGCTTCAAAGTCAGTCAG +
Preference number: 2 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESGVTGR*SFKVSQ
Trigger: CTGACTGACTTTGAAGCTGCATCTGCCAGTTACACC...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTAAGGTAACAGTGCCGTaGCTGGGAGTGCCCCACAAC +
Preference number: 2 (lower is better)
Translates to: RKLAIALIQEQPLSASVCKVTVP*LGVPHN
Trigger: GTTGTGGGGCACTCCCAGCCACGGCACTGTTACCTT...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCAGGGCTCTCTCAAACCTaGGCCTTCCCTCTTAGCACT +
Preference number: 2 (lower is better)
Translates to: GATRECPREKMIRQEPVPGLSQT*AFPLST
Trigger: AGTGCTAAGAGGGAAGGCCCAGGTTTGAGAGAGCCC...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR TCA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCCTTCCCACTGAGGTGTaGTCCACCCTCTTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: DFPAGQISTMSGALPNPSLPTEV*STLLVG
Trigger: CCCCACCAAGAGGGTGGATCACACCTCAGTGGGAAG...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR TCA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTAATATAAAATCCGCCTaGGAACGATGGGAATCAGGG +
Preference number: 2 (lower is better)
Translates to: LSFPKVQPGADRPISRLPNIKSA*ERWESG
Trigger: CCCTGATTCCCATCGTTCTCAGGCGGATTTTATATT...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR TCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACGGCAAATATCAACAATaGGTGGAGCCTTGCCTAATC +
Preference number: 2 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNGKYQQ*VEPCLI
Trigger: GATTAGGCAAGGCTCCACTCATTGTTGATATTTGCC...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR GCA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTCCCCTTGCTGTACAATaGTGCTGGTATTCTGAATTG +
Preference number: 2 (lower is better)
Translates to: LSFPKVQPGADRPISRLPPLAVQ*CWYSEL
Trigger: CAATTCAGAATACCAGCAGCATTGTACAGCAAGGGG...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR GCA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCAAGCTTATTTACCCCTTaGTGTACAATGCTGCTGGTA +
Preference number: 2 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSSLFTP*CTMLLV
Trigger: TACCAGCAGCATTGTACAGCAAGGGGTAAATAAGCT...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR GCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACACTACGCCCACATGTTaGGGTTGTCTTGTTGTTACT +
Preference number: 2 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNTTPTC*GCLVVT
Trigger: AGTAACAACAAGACAACCGCAACATGTGGGCGTAGT...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCCACCGTGGCAGCCTTTaGGGCCACTCAAGTCCTCCA +
Preference number: 2 (lower is better)
Translates to: DFPAGQISTMSGALPNPSHRGSL*GHSSPP
Trigger: TGGAGGACTTGAGTGGCCCCAAAGGCTGCCACGGTG...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCATCTCAACAGCACCACTaGTGGGAAAAGCTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: GATRECPREKMIRQEPVPSQQHH*WEKLAE
Trigger: CTCAGCCAGCTTTTCCCACCAGTGGTGCTGTTGAGA...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACCCAGAGATGGAAAGCTaGGAGACCCTTTTTATGGTT +
Preference number: 2 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNPEMES*ETLFMV
Trigger: AACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGG...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCCATTTGGGGTGTAACTaGCAGATGCAGCTTCAAAGT +
Preference number: 2 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESHLGCN*QMQLQS
Trigger: ACTTTGAAGCTGCATCTGCCAGTTACACCCCAAATG...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR TCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCGGTAACTTCATACCTTaGGGTAGTTTACTTCGCACA +
Preference number: 2 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESGNFIP*GSLLRT
Trigger: TGTGCGAAGTAAACTACCTCAAGGTATGAAGTTACC...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCTGCCCGTTGTTGTCCTaGACTCGAAGGGACAGGGAG +
Preference number: 2 (lower is better)
Translates to: DFPAGQISTMSGALPNPSCPLLS*TRRDRE
Trigger: CTCCCTGTCCCTTCGAGTCCAGGACAACAACGGGCA...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCATGTGATCCACCCTCTTaGTGGGGCCTGGAGAGCTTC +
Preference number: 2 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRACDPPS*WGLESF
Trigger: GAAGCTCTCCAGGCCCCACCAAGAGGGTGGATCACA...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR GCA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCAATATCAAAGCATGCTTaGTGCTGGAAATTCGCTTTA +
Preference number: 2 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSISKHA*CWKFAL
Trigger: TAAAGCGAATTTCCAGCAGCAAGCATGCTTTGATAT...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCAGTTGGGCCAATTGGGTaGGTGTTTGGGGCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRAVGPIG*VFGAER
Trigger: TCTCTCAGCCCCAAACACCCACCCAATTGGCCCAAC...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCACCTCTTGGTGGGGCCTaGAGAGCTTCTTTAAACAAT +
Preference number: 2 (lower is better)
Translates to: GATRECPREKMIRQEPVPPLGGA*RASLNN
Trigger: ATTGTTTAAAGAAGCTCTCCAGGCCCCACCAAGAGG...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR GCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCAGCGTCCCCTTCCCAGTaGTCATATCCAATCATTAAA +
Preference number: 2 (lower is better)
Translates to: GATRECPREKMIRQEPVPASPSQ*SYPIIK
Trigger: TTTAATGATTGGATATGAGCACTGGGAAGGGGACGC...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR GCA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTCTTGCTGTACAATGCTaGTGGTATTCTGAATTGTTT +
Preference number: 2 (lower is better)
Translates to: LSFPKVQPGADRPISRLPLAVQC*WYSELF
Trigger: AAACAATTCAGAATACCAGCAGCATTGTACAGCAAG...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR GCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCTCAAAGCATGCTTGCTaGTGGAAATTCGCTTTAAAT +
Preference number: 2 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESSKHAC*WKFALN
Trigger: ATTTAAAGCGAATTTCCAGCAGCAAGCATGCTTTGA...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTGACCCTTTTTATGGTTaGGACAGGTGGAGAGGCTTA +
Preference number: 2 (lower is better)
Translates to: RKLAIALIQEQPLSASVCDPFYG*DRWRGL
Trigger: TAAGCCTCTCCACCTGTCCCAACCATAAAAAGGGTC...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCCTTCCTCGTCTCTTCTaGGAGCTGAATCAGCCAACG +
Preference number: 2 (lower is better)
Translates to: DFPAGQISTMSGALPNPSLPRLF*ELNQPT
Trigger: CGTTGGCTGATTCAGCTCCCAGAAGAGACGAGGAAG...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CAA 90 bp ACGCCCACATGTTGCGGTTGTCTTGTTGTTACTGTTGTTGCAATGTaGAAAGGAGGGGAACTCCACGCATGGGCTTTTCCATATGTAGAG +
Preference number: 2 (lower is better)
Translates to: TPTCCGCLVVTVVAM*KGGELHAWAFPYVE
Trigger: CTCTACATATGGAAAAGCCCATGCGTGGAGTTCCCCTCCTTTCAACATTGCAACAACAGTAACAACAAGACAACCGCAACATGTGGGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR GCA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCCACACTCTCGATTTCTaGCCGTTGTTGTCCTGGACT +
Preference number: 2 (lower is better)
Translates to: DFPAGQISTMSGALPNPSHTLDF*PLLSWT
Trigger: AGTCCAGGACAACAACGGGCAGAAATCGAGAGTGTG...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR GCA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTCCAGATATCAAAGCATaGTTGCTGCTGGAAATTCGC +
Preference number: 2 (lower is better)
Translates to: RKLAIALIQEQPLSASVCPDIKA*LLLEIR
Trigger: GCGAATTTCCAGCAGCAAGCATGCTTTGATATCTGG...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTCACTCAAGTCCTCCATaGAACCGAGACTTTATCAAG +
Preference number: 2 (lower is better)
Translates to: RKLAIALIQEQPLSASVCHSSPP*NRDFIK
Trigger: CTTGATAAAGTCTCGGTTCCATGGAGGACTTGAGTG...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTTATGGTTGGGACAGGTaGAGAGGCTTAATTCTACTG +
Preference number: 2 (lower is better)
Translates to: RKLAIALIQEQPLSASVCYGWDR*RGLILL
Trigger: CAGTAGAATTAAGCCTCTCCACCTGTCCCAACCATA...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR TCA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGTATTTTTCTTCCCACTaGGGTGTGATCCACCCTCTT +
Preference number: 2 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVYFSSH*GVIHPL
Trigger: AAGAGGGTGGATCACACCTCAGTGGGAAGAAAAATA...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR GCA 90 bp GCATATAGAGCCAGAGATGGAAAGCTGGGAGACCCTTTTTATGGTTGGGACAGGCGTTTAAAAGTGCCTTaGGCTAGAATTTCTGACACC +
Preference number: 2 (lower is better)
Translates to: AYRARDGKLGDPFYGWDRRLKVP*ARISDT
Trigger: GGTGTCAGAAATTCTAGCGCAAGGCACTTTTAAACG...CCTGTCCCAACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGGCTCTATATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp GCATATAGAGCCAGAGATGGAAAGCTGGGAGACCCTTTTTATGGTTGGGACAGGTTGAAGATGGTGATCTaGCATAGATCAGCCACAAGT +
Preference number: 2 (lower is better)
Translates to: AYRARDGKLGDPFYGWDRLKMVI*HRSATS
Trigger: ACTTGTGGCTGATCTATGCCAGATCACCATCTTCAA...CCTGTCCCAACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGGCTCTATATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR TCA 90 bp GCATATAGAGCCAGAGATGGAAAGCTGGGAGACCCTTTTTATGGTTGGGACAGGACAGTTCTTTTCCCTTaGGTCAATACTGTAAGCAAA +
Preference number: 2 (lower is better)
Translates to: AYRARDGKLGDPFYGWDRTVLFP*VNTVSK
Trigger: TTTGCTTACAGTATTGACTCAAGGGAAAAGAACTGT...CCTGTCCCAACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGGCTCTATATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCTCTTTCTCAATCAAGTaGGCAAACCTGATCTACAGC +
Preference number: 2 (lower is better)
Translates to: DFPAGQISTMSGALPNPSSFSIK*ANLIYS
Trigger: GCTGTAGATCAGGTTTGCCCACTTGATTGAGAAAGA...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCAGCTGATAATGATTCATaGAGACAGAAGCCGTCAGTT +
Preference number: 2 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRAADNDS*RQKPSV
Trigger: AACTGACGGCTTCTGTCTCCATGAATCATTATCAGC...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CAA 90 bp AGGTCCTTCATCCCACTAAACCTTAACCACCAAACCATGCTCCTTTaGCTTTCTGGTGGTATAACTTACATGATTTTCCTGCTGGGCAAA +
Preference number: 2 (lower is better)
Translates to: RSFIPLNLNHQTMLL*LSGGITYMIFLLGK
Trigger: TTTGCCCAGCAGGAAAATCATGTAAGTTATACCACCAGAAAGCAAAAGGAGCATGGTTTGGTGGTTAAGGTTTAGTGGGATGAAGGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR TCA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCTACTCTCCAATTTACTaGATTTGCCAGATGATGGAC +
Preference number: 2 (lower is better)
Translates to: DFPAGQISTMSGALPNPSYSPIY*ICQMMD
Trigger: GTCCATCATCTGGCAAATTCAGTAAATTGGAGAGTA...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp CATGGAGACAGAAGCCGTCAGTTAAAAATTCCTCTCAGATACAAACAGAAGCAAATCAGGGTTCCTCACTaGAACATCTTTCTCAATCAA +
Preference number: 2 (lower is better)
Translates to: HGDRSRQLKIPLRYKQKQIRVPH*NIFLNQ
Trigger: TTGATTGAGAAAGATGTTCCAGTGAGGAACCCTGAT...TTGCTTCTGTTTGTATCTGAGAGGAATTTTTAACTGACGGCTTCTGTCTCCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CCA 90 bp CATGGAGACAGAAGCCGTCAGTTAAAAATTCCTCTCAGATACAAACAGAAGCAACCGTATTGTACCTATTaGTTAGGGAGTGATTGGAAT +
Preference number: 2 (lower is better)
Translates to: HGDRSRQLKIPLRYKQKQPYCTY*LGSDWN
Trigger: ATTCCAATCACTCCCTAACCAATAGGTACAATACGG...TTGCTTCTGTTTGTATCTGAGAGGAATTTTTAACTGACGGCTTCTGTCTCCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 72 bp CCAGTGGAACTCCCCCAACTACAAAGACGGCCTGAATaGGTCCAAGGACCGCGCCCTCAGACTCCCCCAGGG +
Preference number: 3 (lower is better)
Translates to: PVELPQLQRRPE*VQGPRPQTPPG
Trigger: CCCTGGGGGAGTCTGAGGGCGCGGTCCTTGGACTCATTCAGGCCGTCTTTGTAGTTGGGGGAGTTCCACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 72 bp TCGCCCAGTGGAACTCCCCCAACTACAAAGACGGCCTaGATGAGTCCAAGGACCGCGCCCTCAGACTCCCCC +
Preference number: 3 (lower is better)
Translates to: SPSGTPPTTKTA*MSPRTAPSDSP
Trigger: GGGGGAGTCTGAGGGCGCGGTCCTTGGACTCATTCAGGCCGTCTTTGTAGTTGGGGGAGTTCCACTGGGCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CCA 72 bp CCTTATGGGAGCACATGGGCTGGGGTGAGGGCACCGTaGCAGCCTTTGGGGCCACTCAAGTCCTCCATGGAA +
Preference number: 3 (lower is better)
Translates to: PYGSTWAGVRAP*QPLGPLKSSME
Trigger: TTCCATGGAGGACTTGAGTGGCCCCAAAGGCTGCCACGGTGCCCTCACCCCAGCCCATGTGCTCCCATAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR GCA 72 bp TCTCAGGCCTGCCGGGGAGAGCACACTCTCGATTTCTaGCCGTTGTTGTCCTGGACTCGAAGGGACAGGGAG +
Preference number: 3 (lower is better)
Translates to: SQACRGEHTLDF*PLLSWTRRDRE
Trigger: CTCCCTGTCCCTTCGAGTCCAGGACAACAACGGGCAGAAATCGAGAGTGTGCTCTCCCCGGCAGGCCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CCA 72 bp GGAGCCGACAGACCAATTTCTCGGCTCCCTACCCCTTaGCTTGGCAAACACCACACCCTAATCCCCCAGGAG +
Preference number: 3 (lower is better)
Translates to: GADRPISRLPTP*LGKHHTLIPQE
Trigger: CTCCTGGGGGATTAGGGTGTGGTGTTTGCCAAGCCAAGGGGTAGGGAGCCGAGAAATTGGTCTGTCGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CAA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACATCGGGAGCTCAGGGTaGGGTTCCAAGTCCCACCAC +
Preference number: 3 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNIGSSG*GSKSHH
Trigger: GTGGTGGGACTTGGAACCCAACCCTGAGCTCCCGAT...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CAA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCAGCACACTTGATAGCATaGTCCAGGGTAGCTAAAGTG +
Preference number: 3 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPAHLIA*SRVAKV
Trigger: CACTTTAGCTACCCTGGACAATGCTATCAAGTGTGC...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CCA 72 bp AGAGAGGGACAAGCTGGAGGCCAAAGGGGTGACACATaGGCAAGGAAAGCAGAAAGTGGGGACCTCATGGCC +
Preference number: 3 (lower is better)
Translates to: REGQAGGQRGDT*ARKAESGDLMA
Trigger: GGCCATGAGGTCCCCACTTTCTGCTTTCCTTGCCCATGTGTCACCCCTTTGGCCTCCAGCTTGTCCCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CAA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCGATTTCTGCCCGTTGTaGTCCTGGACTCGAAGGGAC +
Preference number: 3 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESDFCPL*SWTRRD
Trigger: GTCCCTTCGAGTCCAGGACAACAACGGGCAGAAATC...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CAA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCACCAAGGGCCAGCTGGTaGGTTGTTGGGCATTGTTTA +
Preference number: 3 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSPRASW*VVGHCL
Trigger: TAAACAATGCCCAACAACCAACCAGCTGGCCCTTGG...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CAA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCCCAACGGAAAAGGACTaGGGCTCAAGGTGTGAAGGG +
Preference number: 3 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESPTEKD*GSRCEG
Trigger: CCCTTCACACCTTGAGCCCAAGTCCTTTTCCGTTGG...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR GCA 72 bp TACCTGGAGCCCCAAACTTCCTCTCCTTCCCCAAAGTaGAACCAGGAGCCGACAGACCAATTTCTCGGCTCC +
Preference number: 3 (lower is better)
Translates to: YLEPQTSSPSPK*NQEPTDQFLGS
Trigger: GGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAGGAAGTTTGGGGCTCCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CAA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACGACTACGCCCACATGTaGCGGTTGTCTTGTTGTTAC +
Preference number: 3 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNDYAHM*RLSCCY
Trigger: GTAACAACAAGACAACCGCAACATGTGGGCGTAGTC...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CAA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTAGACCCTTTTTATGGTaGGGACAGGTGGAGAGGCTT +
Preference number: 3 (lower is better)
Translates to: LSFPKVQPGADRPISRLPRPFLW*GQVERL
Trigger: AAGCCTCTCCACCTGTCCCAACCATAAAAAGGGTCT...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 72 bp TCACTGGAACATCTTTCTCAATCAAGTGGGCAAACCTaGTCTACAGCCCGGCCCAGGTGTCCCGGATTCCCA +
Preference number: 3 (lower is better)
Translates to: SLEHLSQSSGQT*STARPRCPGFP
Trigger: TGGGAATCCGGGACACCTGGGCCGGGCTGTAGATCAGGTTTGCCCACTTGATTGAGAAAGATGTTCCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CCA 72 bp TCAGGGTTCCTCACTGGAACATCTTTCTCAATCAAGTaGGCAAACCTGATCTACAGCCCGGCCCAGGTGTCC +
Preference number: 3 (lower is better)
Translates to: SGFLTGTSFSIK*ANLIYSPAQVS
Trigger: GGACACCTGGGCCGGGCTGTAGATCAGGTTTGCCCACTTGATTGAGAAAGATGTTCCAGTGAGGAACCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CCA 72 bp TTTCCAGTCCCTTGCCACACACTTCCTCGTCTCTTCTaGGAGCTGAATCAGCCAACGGAAAAGGACTTGGGC +
Preference number: 3 (lower is better)
Translates to: FPVPCHTLPRLF*ELNQPTEKDLG
Trigger: GCCCAAGTCCTTTTCCGTTGGCTGATTCAGCTCCCAGAAGAGACGAGGAAGTGTGTGGCAAGGGACTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CAA 90 bp TACCACCTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGACAGTGTTGGGCCAATaGGGTGGGTGTTTGGGGCTG +
Preference number: 3 (lower is better)
Translates to: YHLCAPGHNVKPTRERDMTVLGQ*GGCLGL
Trigger: CAGCCCCAAACACCCACCCAATTGGCCCAACACTGT...CATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAGGTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CAA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGGAGGGGCAGACAGTGTaGGGCCAATTGGGTGGGTGT +
Preference number: 3 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVEGQTV*GQLGGC
Trigger: ACACCCACCCAATTGGCCCAACACTGTCTGCCCCTC...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 72 bp ATGGGAATCAGGGACAGTGGTCAGCCCCTACCCTGCTaGGCATTCAATACCACCTATGTGCACCTGGACATA +
Preference number: 3 (lower is better)
Translates to: MGIRDSGQPLPC*AFNTTYVHLDI
Trigger: TATGTCCAGGTGCACATAGGTGGTATTGAATGCTCAGCAGGGTAGGGGCTGACCACTGTCCCTGATTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 72 bp GCTCAAGGTGTGAAGGGAGCAGGCCCCCAAGGAAACTaGACACTGCAACAATCACATTTCAGGTACTGTGGG +
Preference number: 3 (lower is better)
Translates to: AQGVKGAGPQGN*TLQQSHFRYCG
Trigger: CCCACAGTACCTGAAATGTGATTGTTGCAGTGTTCAGTTTCCTTGGGGGCCTGCTCCCTTCACACCTTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 72 bp AAATGGCTCTCTCCTAACCAGACCCCTCACAGGAGCTaGGTCCACAACCCAAACTGCAAAAGGCAACCAGAC +
Preference number: 3 (lower is better)
Translates to: KWLSPNQTPHRS*VHNPNCKRQPD
Trigger: GTCTGGTTGCCTTTTGCAGTTTGGGTTGTGGACTCAGCTCCTGTGAGGGGTCTGGTTAGGAGAGAGCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CAA 90 bp GCATATAGAGCCAGAGATGGAAAGCTGGGAGACCCTTTTTATGGTTGGGACAGGCTCGATTTCTGCCCGTaGTTGTCCTGGACTCGAAGG +
Preference number: 3 (lower is better)
Translates to: AYRARDGKLGDPFYGWDRLDFCP*LSWTRR
Trigger: CCTTCGAGTCCAGGACAACAACGGGCAGAAATCGAG...CCTGTCCCAACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGGCTCTATATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CAA 90 bp GCATATAGAGCCAGAGATGGAAAGCTGGGAGACCCTTTTTATGGTTGGGACAGGCAATTGGGTGGGTGTTaGGGGCTGAGAGATCAGGGT +
Preference number: 3 (lower is better)
Translates to: AYRARDGKLGDPFYGWDRQLGGC*GLRDQG
Trigger: ACCCTGATCTCTCAGCCCCAAACACCCACCCAATTG...CCTGTCCCAACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGGCTCTATATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CAA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCAGTGGGGAAATTTCAGTaGTGCCAATTTGAAGATGGT +
Preference number: 3 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSVGKFQ*CQFEDG
Trigger: ACCATCTTCAAATTGGCACAACTGAAATTTCCCCAC...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CAA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTAAGCTTATTTACCCCTaGCTGTACAATGCTGCTGGT +
Preference number: 3 (lower is better)
Translates to: LSFPKVQPGADRPISRLPKLIYP*LYNAAG
Trigger: ACCAGCAGCATTGTACAGCAAGGGGTAAATAAGCTT...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CAA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACCTTCTTCATTCCGTATaGTACCTATTGGTTAGGGAG +
Preference number: 3 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNLLHSV*YLLVRE
Trigger: CTCCCTAACCAATAGGTACAATACGGAATGAAGAAG...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CAA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTTTCAGTTGTGCCAATTaGAAGATGGTGATCTGGCAT +
Preference number: 3 (lower is better)
Translates to: LSFPKVQPGADRPISRLPFSCAN*KMVIWH
Trigger: ATGCCAGATCACCATCTTCAAATTGGCACAACTGAA...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 72 bp GACAGCCAGGTATGTGTCGAAAGCTGGCTATTGCTTTaGTTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTC +
Preference number: 3 (lower is better)
Translates to: DSQVCVESWLLL*FRNSLSQPLSV
Trigger: GACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCGACACATACCTGGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 72 bp TCTCCTTCTAGAGCCAACTGGGCCCCCATTGAAGACTaGAAAAGGGCCCAATGGAGGTGTAGGATCTCAAAG +
Preference number: 3 (lower is better)
Translates to: SPSRANWAPIED*KRAQWRCRISK
Trigger: CTTTGAGATCCTACACCTCCATTGGGCCCTTTTTCAGTCTTCAATGGGGGCCCAGTTGGCTCTAGAAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR GCA 72 bp CCTCAGACAGCCAGGTATGTGTCGAAAGCTGGCTATTaGTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGT +
Preference number: 3 (lower is better)
Translates to: PQTARYVSKAGY*FDSGTASLSLC
Trigger: ACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCGACACATACCTGGCTGTCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CCA 72 bp GAGGGACATGAATGTGGTGGGGAAGCCCCAACAGAGTaGGGAAATTTCAGTTGTGCCAATTTGAAGATGGTG +
Preference number: 3 (lower is better)
Translates to: EGHECGGEAPTE*GNFSCANLKMV
Trigger: CACCATCTTCAAATTGGCACAACTGAAATTTCCCCACTCTGTTGGGGCTTCCCCACCACATTCATGTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CCA 72 bp GTTGTTGCAATGTTGAAAGGAGGGGAACTCCACGCATaGGCTTTTCCATATGTAGAGAGGCCTTCCTCCCTT +
Preference number: 3 (lower is better)
Translates to: VVAMLKGGELHA*AFPYVERPSSL
Trigger: AAGGGAGGAAGGCCTCTCTACATATGGAAAAGCCCATGCGTGGAGTTCCCCTCCTTTCAACATTGCAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CCA 72 bp AAAGGCAACCAGACCCGAGAGGGGATTAAAGCCATTTaGGGTGTAACTGGCAGATGCAGCTTCAAAGTCAGT +
Preference number: 3 (lower is better)
Translates to: KGNQTREGIKAI*GVTGRCSFKVS
Trigger: ACTGACTTTGAAGCTGCATCTGCCAGTTACACCCCAAATGGCTTTAATCCCCTCTCGGGTCTGGTTGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CAA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTACTGTTGTTGCAATGTaGAAAGGAGGGGAACTCCAC +
Preference number: 3 (lower is better)
Translates to: RKLAIALIQEQPLSASVCTVVAM*KGGELH
Trigger: GTGGAGTTCCCCTCCTTTCAACATTGCAACAACAGT...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CAA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTCTGCTTCTATTCAATTaGGGCCAGACAATTCTGGGG +
Preference number: 3 (lower is better)
Translates to: RKLAIALIQEQPLSASVCLLLFN*GQTILG
Trigger: CCCCAGAATTGTCTGGCCCAAATTGAATAGAAGCAG...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 72 bp TCAACAATGAGTGGAGCCTTGCCTAATCCAAGCAAGTaGAGTTTTCCAGTCCCTTGCCACACACTTCCTCGT +
Preference number: 3 (lower is better)
Translates to: STMSGALPNPSK*SFPVPCHTLPR
Trigger: ACGAGGAAGTGTGTGGCAAGGGACTGGAAAACTTCACTTGCTTGGATTAGGCAAGGCTCCACTCATTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CCA 72 bp TTATTTTTCTTCCCACTGAGGTGTGATCCACCCTCTTaGTGGGGCCTGGAGAGCTTCTTTAAACAATCCACG +
Preference number: 3 (lower is better)
Translates to: LFFFPLRCDPPS*WGLESFFKQST
Trigger: CGTGGATTGTTTAAAGAAGCTCTCCAGGCCCCACCAAGAGGGTGGATCACACCTCAGTGGGAAGAAAAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CAA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCGCCCACATGTTGCGGTaGTCTTGTTGTTACTGTTGT +
Preference number: 3 (lower is better)
Translates to: DFPAGQISTMSGALPNPSAHMLR*SCCYCC
Trigger: ACAACAGTAACAACAAGACAACCGCAACATGTGGGC...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 72 bp TACCTTGAGGTAGTTTACTTCGCACACAGCATTGCCTaGCTACGCCCACATGTTGCGGTTGTCTTGTTGTTA +
Preference number: 3 (lower is better)
Translates to: YLEVVYFAHSIA*LRPHVAVVLLL
Trigger: TAACAACAAGACAACCGCAACATGTGGGCGTAGTCAGGCAATGCTGTGTGCGAAGTAAACTACCTCAAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CAA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCGTTGCGGTTGTCTTGTaGTTACTGTTGTTGCAATGT +
Preference number: 3 (lower is better)
Translates to: DFPAGQISTMSGALPNPSVAVVL*LLLLQC
Trigger: ACATTGCAACAACAGTAACAACAAGACAACCGCAAC...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 72 bp GAAGCAAGTACTCTCCAATTTACTGAATTTGCCAGATaGTGGACTTTAGCTTTATCGGGAGCTCAGGGTTGG +
Preference number: 3 (lower is better)
Translates to: EASTLQFTEFAR*WTLALSGAQGW
Trigger: CCAACCCTGAGCTCCCGATAAAGCTAAAGTCCATCATCTGGCAAATTCAGTAAATTGGAGAGTACTTGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR-3UTR CAA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCTTAACTAGTATCTGTTaGCCCCTTAGATCTATGGAT +
Preference number: 3 (lower is better)
Translates to: DFPAGQISTMSGALPNPSLTSIC*PLRSMD
Trigger: ATCCATAGATCTAAGGGGCAAACAGATACTAGTTAA...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 72 bp ACTTACATGATTTTCCTGCTGGGCAAATATCAACAATaGGTGGAGCCTTGCCTAATCCAAGCAAGTGAAGTT +
Preference number: 3 (lower is better)
Translates to: TYMIFLLGKYQQ*VEPCLIQASEV
Trigger: AACTTCACTTGCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATCATGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 72 bp TCAGATACAAACAGAAGCAAGTACTCTCCAATTTACTaGATTTGCCAGATGATGGACTTTAGCTTTATCGGG +
Preference number: 3 (lower is better)
Translates to: SDTNRSKYSPIY*ICQMMDFSFIG
Trigger: CCCGATAAAGCTAAAGTCCATCATCTGGCAAATTCAGTAAATTGGAGAGTACTTGCTTCTGTTTGTATCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 72 bp GGTGTAACTGGCAGATGCAGCTTCAAAGTCAGTCAGTaGATCAAACCATTTTGGTTATGTGTTTCAAAGAAT +
Preference number: 3 (lower is better)
Translates to: GVTGRCSFKVSQ*IKPFWLCVSKN
Trigger: ATTCTTTGAAACACATAACCAAAATGGTTTGATTCACTGACTGACTTTGAAGCTGCATCTGCCAGTTACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CCA 72 bp TTTAGACACACCTTTCATCATGCTGATAATGATTCATaGAGACAGAAGCCGTCAGTTAAAAATTCCTCTCAG +
Preference number: 3 (lower is better)
Translates to: FRHTFHHADNDS*RQKPSVKNSSQ
Trigger: CTGAGAGGAATTTTTAACTGACGGCTTCTGTCTCCATGAATCATTATCAGCATGATGAAAGGTGTGTCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR TCA 72 bp GGAATTAATCTACAGATACTGACAGTTCTTTTCCCTTaGGTCAATACTGTAAGCAAAGCAATGCATTCGTTC +
Preference number: 3 (lower is better)
Translates to: GINLQILTVLFP*VNTVSKAMHSF
Trigger: GAACGAATGCATTGCTTTGCTTACAGTATTGACTCAAGGGAAAAGAACTGTCAGTATCTGTAGATTAATTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCACACCCACATACTGGGTaGGCACCAGGAGCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPHPHTG*APGAEG
Trigger: CCCTTCGGCTCCTGGTGCCCACCCAGTATGTGGGTG...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CAA 72 bp GCCTGCCGGGGAGAGCACACTCTCGATTTCTGCCCGTaGTTGTCCTGGACTCGAAGGGACAGGGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ACRGEHTLDFCP*LSWTRRDREGL
Trigger: CAGCCCCTCCCTGTCCCTTCGAGTCCAGGACAACAACGGGCAGAAATCGAGAGTGTGCTCTCCCCGGCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCACGGGACTGCGCTGGATaGAGCTGGGAAAAGACCTAC +
Preference number: 4 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPRDCAG*SWEKTY
Trigger: GTAGGTCTTTTCCCAGCTTCATCCAGCGCAGTCCCG...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACGCCCCTTCTTGCCGATaGTGGCGCCCACTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNAPSCR*WRPLPG
Trigger: CCCAGGCAGTGGGCGCCATCATCGGCAAGAAGGGGC...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCTTGCTGCTGCTTGGCTaGGGCCCCCGCTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESLLLLG*GPRCHR
Trigger: CCTGTGGCAGCGGGGGCCCCAGCCAAGCAGCAGCAA...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCAGAGCCCTGGCGGGGCTaGCCCCGAGAGCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: GATRECPREKMIRQEPVPEPWRG*PREPKP
Trigger: GGGCTTTGGCTCTCGGGGTCAGCCCCGCCAGGGCTC...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCAGGGTGGAGTGCACACTaGTGGCTTTTTCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPGWSAH*WLFQLH
Trigger: GTGCAGCTGAAAAAGCCATCAGTGTGCACTCCACCC...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCATGCTGCTGCTTAACCTaGGCCAGGATGTCTCGGATC +
Preference number: 4 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPCCCLT*ARMSRI
Trigger: GATCCGAGACATCCTGGCCCAGGTTAAGCAGCAGCA...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGCCCCGCTGCCACAGGTaGGCCCTGGCGGGGCTGACC +
Preference number: 4 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVPRCHR*ALAGLT
Trigger: GGTCAGCCCCGCCAGGGCTCACCTGTGGCAGCGGGG...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTCTTGGGCTCAAGGTGTaGAGGGAGCAGGCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LSFPKVQPGADRPISRLPLGLKV*REQAPK
Trigger: CTTGGGGGCCTGCTCCCTTCACACCTTGAGCCCAAG...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCAGCCGCAAACTTTCTTTaGACCCCACCCCAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPAANFL*TPPQKL
Trigger: CAACTTCTGGGGTGGGGTGCAAAGAAAGTTTGCGGC...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCATGTCCACTTGCTGCTaGTTGGCTGGGGCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESMSTCC*LAGAPA
Trigger: AGCGGGGGCCCCAGCCAAGCAGCAGCAAGTGGACAT...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACTGTGCCCCAAAGCGGTaGACAGGACCGAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNCAPKR*TGPRVR
Trigger: CCTGACCCTCGGTCCTGTGCACCGCTTTGGGGCACA...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCAGTCAGGTGTTTCGGGTaGTGCAATCTTGATGGAGGC +
Preference number: 4 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPVRCFG*CNLDGG
Trigger: GCCTCCATCAAGATTGCACCACCCGAAACACCTGAC...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCACGGCTCCCTACCCCTTaGCTTGGCAAACACCACACC +
Preference number: 4 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSRLPTP*LGKHHT
Trigger: GGTGTGGTGTTTGCCAAGCCAAGGGGTAGGGAGCCG...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCTCAAGTGGGCAAACCTaGTCTACAGCCCGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESSSGQT*STARPR
Trigger: CCTGGGCCGGGCTGTAGATCAGGTTTGCCCACTTGA...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACCTTCCCACTGAGGTGTaGTCCACCCTCTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNLPTEV*STLLVG
Trigger: CCCCACCAAGAGGGTGGATCACACCTCAGTGGGAAG...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCCAAAGACGGCCTGAATaGGTCCAAGGACCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESQRRPE*VQGPRP
Trigger: AGGGCGCGGTCCTTGGACTCATTCAGGCCGTCTTTG...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCAGATGGCTTTTTCAGCTaGACCTGCGTTCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPDGFFS*TCVLLP
Trigger: AGGAAGGAGAACGCAGGTGCAGCTGAAAAAGCCATC...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACGATGATGGCGCCCACTaGCTGGGCGGGGATAAACAC +
Preference number: 4 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNDDGAH*LGGDKH
Trigger: GTGTTTATCCCCGCCCAGGCAGTGGGCGCCATCATC...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCACACACTCTCGATTTCTaGCCGTTGTTGTCCTGGACT +
Preference number: 4 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPHTLDF*PLLSWT
Trigger: AGTCCAGGACAACAACGGGCAGAAATCGAGAGTGTG...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCAGTGGGAGGAAGGGGTTaGCTAGAGGCACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSVGGRG*LEAPAS
Trigger: AGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCCCAC...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTCACTTCCTCCGTGCCTaGGCCTGGTTACTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LSFPKVQPGADRPISRLPHFLRA*AWLLCP
Trigger: GGGACAGAGTAACCAGGCCCAGGCACGGAGGAAGTG...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCAAGGAACCAGCCCTTATaGGAGCACATGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSRNQPL*EHMGWG
Trigger: ACCCCAGCCCATGTGCTCCCATAAGGGCTGGTTCCT...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCAGGGTCACGCTCTCGTTaGGGTTGCCGATGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSGSRSR*GCRCKA
Trigger: AGCTTTACATCGGCAACCTCAACGAGAGCGTGACCC...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCGCACACAGCATTGCCTaGCTACGCCCACATGTTGCG +
Preference number: 4 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESAHSIA*LRPHVA
Trigger: CGCAACATGTGGGCGTAGTCAGGCAATGCTGTGTGC...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTACCCCTCACAGGAGCTaGGTCCACAACCCAAACTGC +
Preference number: 4 (lower is better)
Translates to: LSFPKVQPGADRPISRLPTPHRS*VHNPNC
Trigger: GCAGTTTGGGTTGTGGACTCAGCTCCTGTGAGGGGT...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCAAACAGTCGAGTGGTTTaGATGGCAAAGCCACTAGGA +
Preference number: 4 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPNSRVV*MAKPLG
Trigger: TCCTAGTGGCTTTGCCATTCAAACCACTCGACTGTT...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCAACCTGCACCATCTCCTaGTCGGGAGCCTGCATAAAG +
Preference number: 4 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSTCTIS*SGACIK
Trigger: CTTTATGCAGGCTCCCGAGCAGGAGATGGTGCAGGT...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTGCGGGGATAAACACCTaGACCATCTCCTGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: LSFPKVQPGADRPISRLPAGINT*TISCSG
Trigger: TCCCGAGCAGGAGATGGTGCAGGTGTTTATCCCCGC...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCATACTACCACCTCAGCTaGCGTCAAATTCTGCAACTC +
Preference number: 4 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPYYHLS*RQILQL
Trigger: GAGTTGCAGAATTTGACGGCAGCTGAGGTGGTAGTA...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCTGGTCACTTCCTCCGTaGCTGGGCCTGGTTACTCTG +
Preference number: 4 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESWSLPP*LGLVTL
Trigger: CAGAGTAACCAGGCCCAGGCACGGAGGAAGTGACCA...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCGGATCCTGGCAGGCCTaGCTGTTCCCCAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESGSWQA*LFPKDK
Trigger: TTTGTCCTTGGGGAACAGGCAGGCCTGCCAGGATCC...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCAGAGACCTTCAGGGCATaGTTCTCCAACTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSETFRA*FSNWWP
Trigger: TGGCCACCAGTTGGAGAACCATGCCCTGAAGGTCTC...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCAGCTGGCACACGTATGTaGGTCTCCAGCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSAGTRM*VSSFTS
Trigger: GGAAGTGAAGCTGGAGACCCACATACGTGTGCCAGC...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCAGTTGGGCCAATTGGGTaGGTGTTTGGGGCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSVGPIG*VFGAER
Trigger: TCTCTCAGCCCCAAACACCCACCCAATTGGCCCAAC...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp TACCACCTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGGGGGTGAGGGCACCGTaGCAGCCTTTGGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: YHLCAPGHNVKPTRERDMGVRAP*QPLGPL
Trigger: GAGTGGCCCCAAAGGCTGCCACGGTGCCCTCACCCC...CATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAGGTGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCAGACCCTTTTTATGGTTaGGACAGGTGGAGAGGCTTA +
Preference number: 4 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPDPFYG*DRWRGL
Trigger: TAAGCCTCTCCACCTGTCCCAACCATAAAAAGGGTC...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACCCCGGTTGGAATAGGTaGCATTCACCACTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNPGWNR*HSPLPS
Trigger: AGACGGCAGTGGTGAATGTCACCTATTCCAACCGGG...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCCAACTGGGCCCCCATTaGAGACTGAAAAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESQLGPH*RLKKGP
Trigger: TGGGCCCTTTTTCAGTCTTCAATGGGGGCCCAGTTG...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCAGGTGACATTCACCACTaGCGTCTCACTCTCGGTGTT +
Preference number: 4 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSGDIHH*RLTLGV
Trigger: AACACCGAGAGTGAGACGGCAGTGGTGAATGTCACC...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTGGGATGTCCACTTGCTaGTGCTTGGCTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: RKLAIALIQEQPLSASVCGMSTC*CLAGAP
Trigger: GGGGGCCCCAGCCAAGCAGCAGCAAGTGGACATCCC...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTTCTCCTTCCCCAAAGTaGAACCAGGAGCCGACAGAC +
Preference number: 4 (lower is better)
Translates to: LSFPKVQPGADRPISRLPSPSPK*NQEPTD
Trigger: GTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGA...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACAGGGGTCTGGTCTCTTaGTACTACCACCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNRGLVS*YYHLSC
Trigger: GCAGCTGAGGTGGTAGTACCAAGAGACCAGACCCCT...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp TACCACCTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGGGGACAGGGAGGGGCTaGTCACTTCCTCCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: YHLCAPGHNVKPTRERDMGTGRG*SLPPCL
Trigger: CAGGCACGGAGGAAGTGACCAGCCCCTCCCTGTCCC...CATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAGGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACAGGGGCAGACAGTGTTaGGCCAATTGGGTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNRGRQC*ANWVGV
Trigger: AACACCCACCCAATTGGCCCAACACTGTCTGCCCCT...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCAGGCCAAACAAGGCTCTaGGCTCTGCCCCTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GATRECPREKMIRQEPVPGQTRL*ALPLWA
Trigger: AGCCCAGAGGGGCAGAGCCCAGAGCCTTGTTTGGCC...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCATGGGCCAGACAATTCTaGGGGCTACAAGGGAATGTC +
Preference number: 4 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSWARQF*GLQGNV
Trigger: GACATTCCCTTGTAGCCCCCAGAATTGTCTGGCCCA...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCGCTGGGATCGCCCAGTaGAACTCCCCCAACTACAAA +
Preference number: 4 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESAGIAQ*NSPNYK
Trigger: TTTGTAGTTGGGGGAGTTCCACTGGGCGATCCCAGC...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACCAGAAATGTTACAAGTaGCTCCCCAGCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNQKCYK*LPSPHS
Trigger: GCTGTGGGGGCTGGGGAGCCACTTGTAACATTTCTG...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCCACCTGGACATAATGTaGAACCTACACGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESHLDIM*NLHGRG
Trigger: CCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTG...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCAGCACATGGGCTGGGGTaGGGGCACCGTGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRAAHGLG*GHRGSL
Trigger: AAGGCTGCCACGGTGCCCTCACCCCAGCCCATGTGC...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACGCATTGTTTAACCACTaGGAGCCCCCAGCTCCACTA +
Preference number: 4 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNALFNH*EPPAPL
Trigger: TAGTGGAGCTGGGGGCTCTCAGTGGTTAAACAATGC...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGCCAGGTGGACCTCTCTaGGGGCGAGAGGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVPGGPL*GREGGL
Trigger: AAGGCCACCCTCTCGCCCTCAGAGAGGTCCACCTGG...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GCATATAGAGCCAGAGATGGAAAGCTGGGAGACCCTTTTTATGGTTGGGACAGGCCCTTGAGAGCTAACTaGGGCCCCTCCTCACTGCCC +
Preference number: 4 (lower is better)
Translates to: AYRARDGKLGDPFYGWDRPLRAN*GPSSLP
Trigger: GGGCAGTGAGGAGGGGCCTCAGTTAGCTCTCAAGGG...CCTGTCCCAACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGGCTCTATATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCACCTCTTCTGAGTAAGTaGTGTTTCAGAACTGCTTAC +
Preference number: 4 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPPLLSK*CFRTAY
Trigger: GTAAGCAGTTCTGAAACATCACTTACTCAGAAGAGG...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACCTTCGCACACAGCATTaGCTGACTACGCCCACATGT +
Preference number: 4 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNLRTQH*LTTPTC
Trigger: ACATGTGGGCGTAGTCAGGCAATGCTGTGTGCGAAG...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCCTTCCTCGTCTCTTCTaGGAGCTGAATCAGCCAACG +
Preference number: 4 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESLPRLF*ELNQPT
Trigger: CGTTGGCTGATTCAGCTCCCAGAAGAGACGAGGAAG...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCATATTTGGAAGGGAAATaGCTTTTATGTCCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPYLEGK*LLCPLA
Trigger: TGCCAGGGGACATAAAAGCCATTTCCCTTCCAAATA...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCACAAAGCCTTTATTCCTaGGGGAGCTTATTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSQSLYS*GSLLAG
Trigger: CCCTGCCAATAAGCTCCCCCAGGAATAAAGGCTTTG...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCAAGGCGTAGCCGGATTTaGCCAAGAACTGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: GATRECPREKMIRQEPVPRRSRI*PRTGRC
Trigger: ACAGCGGCCAGTTCTTGGTCAAATCCGGCTACGCCT...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTAGGCCAGGGATCAGGTaGGACTGCAGGCTCATGGCA +
Preference number: 4 (lower is better)
Translates to: RKLAIALIQEQPLSASVCRPGIR*DCRLMA
Trigger: TGCCATGAGCCTGCAGTCTCACCTGATCCCTGGCCT...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCAACCGGGAGAGCTGTTTaGTGTGCTGCCCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GATRECPREKMIRQEPVPTGRAV*CAAPSC
Trigger: GCAAGAAGGGGCAGCACATCAAACAGCTCTCCCGGT...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCACCTAATCCAAGCAAGTaGAGTTTTCCAGTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSPNPSK*SFPVPC
Trigger: GCAAGGGACTGGAAAACTTCACTTGCTTGGATTAGG...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACGAAATGGGGCTTCTATaGGGAGGTCCATTAGAGGGT +
Preference number: 4 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNEMGLL*GGPLEG
Trigger: ACCCTCTAATGGACCTCCTCATAGAAGCCCCATTTC...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCAGGGGACAGGGGTGACTaGAGTCAGCTGGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRAGDRGD*SQLAGR
Trigger: CCTCCCAGCCAGCTGACTTCAGTCACCCCTGTCCCC...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCATGCCGTGGCTGGGAGTaGCCCACAACCCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRACRGWE*PTTPAS
Trigger: AGAGGCAGGGGTTGTGGGGCACTCCCAGCCACGGCA...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACCAGGGCAAAGGATCCTaGTTCACCTCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNQGKGS*FTSSPS
Trigger: AGAAGGAGAAGAGGTGAAGCAGGATCCTTTGCCCTG...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCACTAAGCAAGTGGAGCTaGCACTACCTAATTTATCTA +
Preference number: 4 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPLSKWS*HYLIYL
Trigger: TAGATAAATTAGGTAGTGGCAGCTCCACTTGCTTAG...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCATGCCCGTTGTTGTCCTaGACTCGAAGGGACAGGGAG +
Preference number: 4 (lower is better)
Translates to: GATRECPREKMIRQEPVPCPLLS*TRRDRE
Trigger: CTCCCTGTCCCTTCGAGTCCAGGACAACAACGGGCA...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTGGGAATCAGGGACAGTaGTCAGCCCCTACCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RKLAIALIQEQPLSASVCGNQGQ*SAPTLL
Trigger: CAGCAGGGTAGGGGCTGACCACTGTCCCTGATTCCC...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GCATATAGAGCCAGAGATGGAAAGCTGGGAGACCCTTTTTATGGTTGGGACAGGCACCGTGGCAGCCTTTaGGGCCACTCAAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AYRARDGKLGDPFYGWDRHRGSL*GHSSPP
Trigger: TGGAGGACTTGAGTGGCCCCAAAGGCTGCCACGGTG...CCTGTCCCAACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGGCTCTATATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCATGGGAGCACATGGGCTaGGGTGAGGGCACCGTGGCA +
Preference number: 4 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRAWEHMG*GEGTVA
Trigger: TGCCACGGTGCCCTCACCCCAGCCCATGTGCTCCCA...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACACAGGGAGACAGAGGTaGGGGCAGTTAACTAGTATC +
Preference number: 4 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNTGRQR*GQLTSI
Trigger: GATACTAGTTAACTGCCCCCACCTCTGTCTCCCTGT...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACGTCCTTCCTTGCCAATaGGACGCCCTACAAAGTTAT +
Preference number: 4 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNVLPCQ*DALQSY
Trigger: ATAACTTTGTAGGGCGTCTCATTGGCAAGGAAGGAC...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCGACCCGGCCAGCTGCTaGTGCTGGCACACGTATGTG +
Preference number: 4 (lower is better)
Translates to: DFPAGQISTMSGALPNPSDPASC*CWHTYV
Trigger: CACATACGTGTGCCAGCATCAGCAGCTGGCCGGGTC...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTAGCTGGCTATTGCTTTaGTTCAGGAACAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LSFPKVQPGADRPISRLPSWLLL*FRNSLS
Trigger: AGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCT...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GCATATAGAGCCAGAGATGGAAAGCTGGGAGACCCTTTTTATGGTTGGGACAGGTTTCCCCAGGCTTCCTaGCTTTGGGGCTGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: AYRARDGKLGDPFYGWDRFPQAS*LWGCVV
Trigger: CACCACACAGCCCCAAAGTCAGGAAGCCTGGGGAAA...CCTGTCCCAACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGGCTCTATATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCAAGGGGGATGTCCACTTaGTGCTGCTTGGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRARGMST*CCLAGA
Trigger: GGCCCCAGCCAAGCAGCAGCAAGTGGACATCCCCCT...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp GCATATAGAGCCAGAGATGGAAAGCTGGGAGACCCTTTTTATGGTTGGGACAGGAGGATAGCTCCCAACTaGCTCCAGAAGGAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: AYRARDGKLGDPFYGWDRRIAPN*LQKEGV
Trigger: GACCCCCTCCTTCTGGAGGCAGTTGGGAGCTATCCT...CCTGTCCCAACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGGCTCTATATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACCTTACAAATCCACTTTaGCTCAGGGGAGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNLTNPL*LRGGSS
Trigger: AGAGCTTCCTCCCCTGAGGCAAAGTGGATTTGTAAG...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCCCCCTCCGAGAGGGCTaGTGTGTCACGTTTCTCCGC +
Preference number: 4 (lower is better)
Translates to: DFPAGQISTMSGALPNPSPLREG*CVTFLR
Trigger: GCGGAGAAACGTGACACACCAGCCCTCTCGGAGGGG...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCACCTACAAAGTTATTATaGGCCAGGATCTTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSPTKLL*ARIFRG
Trigger: TCCCCTGAAGATCCTGGCCCATAATAACTTTGTAGG...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCAATGGCGCCCACTGCCTaGGCGGGGATAAACACCTGC +
Preference number: 4 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRAMAPTA*AGINTC
Trigger: GCAGGTGTTTATCCCCGCCCAGGCAGTGGGCGCCAT...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCGCTTCACTTCCTCCTTaGGACCAAAGAAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESASLPP*DQRSSP
Trigger: AGGAGAACTTCTTTGGTCCCAAGGAGGAAGTGAAGC...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCCCTCTTGGTGGGGCCTaGAGAGCTTCTTTAAACAAT +
Preference number: 4 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESPLGGA*RASLNN
Trigger: ATTGTTTAAAGAAGCTCTCCAGGCCCCACCAAGAGG...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACGGGATTAAAGCCATTTaGGGTGTAACTGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNGIKAI*GVTGRC
Trigger: GCATCTGCCAGTTACACCCCAAATGGCTTTAATCCC...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCACAACAGGGAGCTACCTaGAGCCCCAAACTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GATRECPREKMIRQEPVPQQGAT*SPKLPL
Trigger: GAGAGGAAGTTTGGGGCTCCAGGTAGCTCCCTGTTG...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CAA 72 bp CAGATGATGGACTTTAGCTTTATCGGGAGCTCAGGGTaGGGTTCCAAGTCCCACCACCAAGGTAACAGTGCC +
Preference number: 4 (lower is better)
Translates to: QMMDFSFIGSSG*GSKSHHQGNSA
Trigger: GGCACTGTTACCTTGGTGGTGGGACTTGGAACCCAACCCTGAGCTCCCGATAAAGCTAAAGTCCATCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTGGCCATTCAGCTTCATaGTGGCTTGCCTGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: RKLAIALIQEQPLSASVCGHSAS*WLAWSA
Trigger: AGCAGACCAGGCAAGCCATCATGAAGCTGAATGGCC...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCACCCTCAGGGGTGGAGTaGACACTGATGGCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: GATRECPREKMIRQEPVPPSGVE*TLMAFS
Trigger: TGAAAAAGCCATCAGTGTGCACTCCACCCCTGAGGG...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCATTTGTCTCGGTATCTTaGTCTACCTTCTTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSFVSVS*STFFRF
Trigger: GAACCTGAAGAAGGTAGAGCAAGATACCGAGACAAA...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCCCCCTTGCTGTACAATaGTGCTGGTATTCTGAATTG +
Preference number: 4 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESPLAVQ*CWYSEL
Trigger: CAATTCAGAATACCAGCAGCATTGTACAGCAAGGGG...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCCGGCAGTGCTATCTCTaGAGTAGGGGCAGGGGACAG +
Preference number: 4 (lower is better)
Translates to: DFPAGQISTMSGALPNPSRQCYL*SRGRGQ
Trigger: CTGTCCCCTGCCCCTACTGCAGAGATAGCACTGCCG...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGAAAGCTTGTTCATGGTaGCGGTCTCGGGGCAGGACG +
Preference number: 4 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVKACSW*RSRGRT
Trigger: CGTCCTGCCCCGAGACCGCCACCATGAACAAGCTTT...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GCATATAGAGCCAGAGATGGAAAGCTGGGAGACCCTTTTTATGGTTGGGACAGGTGTAAAGCTTGTTCATaGTGGCGGTCTCGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AYRARDGKLGDPFYGWDRCKACS*WRSRGR
Trigger: CCTGCCCCGAGACCGCCACCATGAACAAGCTTTACA...CCTGTCCCAACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGGCTCTATATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GCATATAGAGCCAGAGATGGAAAGCTGGGAGACCCTTTTTATGGTTGGGACAGGGATCCACCCTCTTGGTaGGGCCTGGAGAGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: AYRARDGKLGDPFYGWDRDPPSW*GLESFF
Trigger: AAAGAAGCTCTCCAGGCCCCACCAAGAGGGTGGATC...CCTGTCCCAACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGGCTCTATATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCATCGGGAGCTCAGGGTTaGGTTCCAAGTCCCACCACC +
Preference number: 4 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRASGAQG*VPSPTT
Trigger: GGTGGTGGGACTTGGAACCCAACCCTGAGCTCCCGA...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp TACCACCTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGGGGCTCTCTCAAACCTaGGCCTTCCCTCTTAGCACT +
Preference number: 4 (lower is better)
Translates to: YHLCAPGHNVKPTRERDMGLSQT*AFPLST
Trigger: AGTGCTAAGAGGGAAGGCCCAGGTTTGAGAGAGCCC...CATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAGGTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTCCCTCCAGTGTTCTCTaGGTTTTAAATGGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LSFPKVQPGADRPISRLPPSSVL*VLNGVF
Trigger: AAAGACCCCATTTAAAACCCAGAGAACACTGGAGGG...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTTCAACTCACTTGTCCTaGCTGGGATTCATACCCTTA +
Preference number: 4 (lower is better)
Translates to: LSFPKVQPGADRPISRLPSTHLS*LGFIPL
Trigger: TAAGGGTATGAATCCCAGCCAGGACAAGTGAGTTGA...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp TACCACCTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGTCTACTGTACCATACTaGGCCAGCAGGCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: YHLCAPGHNVKPTRERDMSTVPY*ASRLSS
Trigger: ACTGGACAGCCTGCTGGCTCAGTATGGTACAGTAGA...CATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAGGTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GCATATAGAGCCAGAGATGGAAAGCTGGGAGACCCTTTTTATGGTTGGGACAGGCAGCCCCTACCCTGCTaGGCATTCAATACCACCTAT +
Preference number: 4 (lower is better)
Translates to: AYRARDGKLGDPFYGWDRQPLPC*AFNTTY
Trigger: ATAGGTGGTATTGAATGCTCAGCAGGGTAGGGGCTG...CCTGTCCCAACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGGCTCTATATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCATGGAGGCCAAAGGGGTaGCACATGGGCAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRAWRPKG*HMGKES
Trigger: GCTTTCCTTGCCCATGTGTCACCCCTTTGGCCTCCA...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGGCCCCCATTGAAGACTaGAAAAGGGCCCAATGGAGG +
Preference number: 4 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVAPIED*KRAQWR
Trigger: CCTCCATTGGGCCCTTTTTCAGTCTTCAATGGGGGC...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGACTACAAAGACGGCCTaGATGAGTCCAAGGACCGCG +
Preference number: 4 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVTTKTA*MSPRTA
Trigger: CGCGGTCCTTGGACTCATTCAGGCCGTCTTTGTAGT...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGGCCAGGGGCAGACTGTaGAAGCTGTTACCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVARGRL*KLLPVG
Trigger: TCCAACAGGTAACAGCTTTCACAGTCTGCCCCTGGC...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTAAAAGCTGGCTGAGATaGTCTTTAACCAAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LSFPKVQPGADRPISRLPKSWLR*SLTKGG
Trigger: TCCTCCTTTGGTTAAAGAGCATCTCAGCCAGCTTTT...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp GCATATAGAGCCAGAGATGGAAAGCTGGGAGACCCTTTTTATGGTTGGGACAGGGTCCACAACCCAAACTaGAAAAGGCAACCAGACCCG +
Preference number: 4 (lower is better)
Translates to: AYRARDGKLGDPFYGWDRVHNPN*KRQPDP
Trigger: CGGGTCTGGTTGCCTTTTGCAGTTTGGGTTGTGGAC...CCTGTCCCAACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGGCTCTATATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCACCCACAGCCGGGAAGTaGCAGTCAAGATTTAAGCAT +
Preference number: 4 (lower is better)
Translates to: GATRECPREKMIRQEPVPPTAGK*QSRFKH
Trigger: ATGCTTAAATCTTGACTGGCACTTCCCGGCTGTGGG...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCAGAGACTGCAGGCTCATaGCAGCCACATCATTCTCAT +
Preference number: 4 (lower is better)
Translates to: GATRECPREKMIRQEPVPETAGS*QPHHSH
Trigger: ATGAGAATGATGTGGCTGCCATGAGCCTGCAGTCTC...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACTTGAAGATGGTGATCTaGCATAGATCAGCCACAAGT +
Preference number: 4 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNLKMVI*HRSATS
Trigger: ACTTGTGGCTGATCTATGCCAGATCACCATCTTCAA...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp TACCACCTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGCTGTTGTTGCAATGTTaGAAGGAGGGGAACTCCACG +
Preference number: 4 (lower is better)
Translates to: YHLCAPGHNVKPTRERDMLLLQC*KEGNST
Trigger: CGTGGAGTTCCCCTCCTTTCAACATTGCAACAACAG...CATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAGGTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTATTCTCAGGTCCCTGTaGTATCTGCTCATCGGGGAT +
Preference number: 4 (lower is better)
Translates to: RKLAIALIQEQPLSASVCILRSL*YLLIGD
Trigger: ATCCCCGATGAGCAGATAGCACAGGGACCTGAGAAT...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTGCGTTCTCCTTCCTATaGACGTCTATCTTGGACTGG +
Preference number: 4 (lower is better)
Translates to: RKLAIALIQEQPLSASVCAFSFL*TSILDW
Trigger: CCAGTCCAAGATAGACGTGCATAGGAAGGAGAACGC...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp TACCACCTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAGTTTTCCAGTCCCTTaGCACACACTTCCTCGTCTC +
Preference number: 4 (lower is better)
Translates to: YHLCAPGHNVKPTRERDMSFPVP*HTLPRL
Trigger: GAGACGAGGAAGTGTGTGGCAAGGGACTGGAAAACT...CATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAGGTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCAGTTAATCAAAACACATaGTCCCGAGGAGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GATRECPREKMIRQEPVPVNQNT*SRGASC
Trigger: GCAGGAAGCTCCTCGGGAGCATGTGTTTTGATTAAC...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGCGGAGAAAGTTTCGATaGCCTTCATCGCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVRRKFR*PSSPSA
Trigger: AGCACTGGGCGATGAAGGCCATCGAAACTTTCTCCG...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCAATTTTCACGATGACCTaGTCGTTCTCATCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GATRECPREKMIRQEPVPIFTMT*SFSSGV
Trigger: GACCCCTGATGAGAACGACCAGGTCATCGTGAAAAT...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp TACCACCTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGGAAGCCCCAACAGAGTaGGGAAATTTCAGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: YHLCAPGHNVKPTRERDMEAPTE*GNFSCA
Trigger: GGCACAACTGAAATTTCCCCACTCTGTTGGGGCTTC...CATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAGGTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGTCTCAACAGCACCACTaGTGGGAAAAGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVSQQHH*WEKLAE
Trigger: CTCAGCCAGCTTTTCCCACCAGTGGTGCTGTTGAGA...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGGGGAGACCCTTTTTATaGTTGGGACAGGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVGRPFL*LGQVER
Trigger: CCTCTCCACCTGTCCCAACCATAAAAAGGGTCTCCC...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGCCCTACCCCTTGGCTTaGCAAACACCACACCCTAAT +
Preference number: 4 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVPYPLA*QTPHPN
Trigger: ATTAGGGTGTGGTGTTTGCCAAGCCAAGGGGTAGGG...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCAGTCTCTTCTGGGAGCTaGATCAGCCAACGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRAVSSGS*ISQRKR
Trigger: CCTTTTCCGTTGGCTGATTCAGCTCCCAGAAGAGAC...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTTCCTTAGCCTCTTTATaGATAATCTCCAAGATCATC +
Preference number: 4 (lower is better)
Translates to: LSFPKVQPGADRPISRLPSLASL*IISKII
Trigger: GATGATCTTGGAGATTATGCATAAAGAGGCTAAGGA...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACATATCAAAGCATGCTTaGTGCTGGAAATTCGCTTTA +
Preference number: 4 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNISKHA*CWKFAL
Trigger: TAAAGCGAATTTCCAGCAGCAAGCATGCTTTGATAT...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCACCAGATATCAAAGCATaGTTGCTGCTGGAAATTCGC +
Preference number: 4 (lower is better)
Translates to: GATRECPREKMIRQEPVPPDIKA*LLLEIR
Trigger: GCGAATTTCCAGCAGCAAGCATGCTTTGATATCTGG...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CATGGAGACAGAAGCCGTCAGTTAAAAATTCCTCTCAGATACAAACAGAAGCAAATGGCACCCACATACTaGGTGGGCACCAGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: HGDRSRQLKIPLRYKQKQMAPTY*VGTRSR
Trigger: TCGGCTCCTGGTGCCCACCCAGTATGTGGGTGCCAT...TTGCTTCTGTTTGTATCTGAGAGGAATTTTTAACTGACGGCTTCTGTCTCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CATGGAGACAGAAGCCGTCAGTTAAAAATTCCTCTCAGATACAAACAGAAGCAAGCGGCGGGACTGCGCTaGATGAAGCTGGGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: HGDRSRQLKIPLRYKQKQAAGLR*MKLGKD
Trigger: GTCTTTTCCCAGCTTCATCCAGCGCAGTCCCGCCGC...TTGCTTCTGTTTGTATCTGAGAGGAATTTTTAACTGACGGCTTCTGTCTCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCACACTCAAGTCCTCCATaGAACCGAGACTTTATCAAG +
Preference number: 4 (lower is better)
Translates to: GATRECPREKMIRQEPVPHSSPP*NRDFIK
Trigger: CTTGATAAAGTCTCGGTTCCATGGAGGACTTGAGTG...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCACTAAAGTGCATTACCTaGCTAATATGCATTGTCAAT +
Preference number: 4 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSLKCIT*LICIVN
Trigger: ATTGACAATGCATATTAGCCAGGTAATGCACTTTAG...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCAGACCAAGGGCCAGCTaGTTGGTTGTTGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: DFPAGQISTMSGALPNPSRPRAS*LVVGHC
Trigger: ACAATGCCCAACAACCAACCAGCTGGCCCTTGGTCT...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGCAACGGAAAAGGACTTaGGCTCAAGGTGTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVQRKRT*AQGVKG
Trigger: TCCCTTCACACCTTGAGCCCAAGTCCTTTTCCGTTG...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCCACCAGCTTCTCCTGTaGAGCAAGAAGGCTCAAGCA +
Preference number: 4 (lower is better)
Translates to: DFPAGQISTMSGALPNPSHQLLL*SKKAQA
Trigger: TGCTTGAGCCTTCTTGCTCCACAGGAGAAGCTGGTG...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTCTCACTTGTCCTGGCTaGGATTCATACCCTTATGCA +
Preference number: 4 (lower is better)
Translates to: RKLAIALIQEQPLSASVCLTCPG*DSYPYA
Trigger: TGCATAAGGGTATGAATCCCAGCCAGGACAAGTGAG...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTTATTTTTCTTCCCACTaGGGTGTGATCCACCCTCTT +
Preference number: 4 (lower is better)
Translates to: RKLAIALIQEQPLSASVCYFSSH*GVIHPL
Trigger: AAGAGGGTGGATCACACCTCAGTGGGAAGAAAAATA...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp TACCACCTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGCTAACCTCATTTAACTaGTGGCTTCTGTCTCCCACA +
Preference number: 4 (lower is better)
Translates to: YHLCAPGHNVKPTRERDMLTSFN*WLLSPT
Trigger: TGTGGGAGACAGAAGCCATCAGTTAAATGAGGTTAG...CATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAGGTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTGGCAAATATCAACAATaGGTGGAGCCTTGCCTAATC +
Preference number: 4 (lower is better)
Translates to: RKLAIALIQEQPLSASVCGKYQQ*VEPCLI
Trigger: GATTAGGCAAGGCTCCACTCATTGTTGATATTTGCC...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCGGGAGGAAGCTCTTTTaGTTCACTCTGGTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: DFPAGQISTMSGALPNPSGRKLF*FTLVLG
Trigger: CCCCAAAACCAGAGTGAATCAAAAGAGCTTCCTCCC...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CATGGAGACAGAAGCCGTCAGTTAAAAATTCCTCTCAGATACAAACAGAAGCAAACTCATTCTCAGGCCTaGCGGGGAGAGCACACTCTC +
Preference number: 4 (lower is better)
Translates to: HGDRSRQLKIPLRYKQKQTHSQA*RGEHTL
Trigger: GAGAGTGTGCTCTCCCCGGCAGGCCTGAGAATGAGT...TTGCTTCTGTTTGTATCTGAGAGGAATTTTTAACTGACGGCTTCTGTCTCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCATTAACCACCAAACCATaGTCCTTTTGCTTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: GATRECPREKMIRQEPVPLTTKP*SFCFLV
Trigger: CACCAGAAAGCAAAAGGAGCATGGTTTGGTGGTTAA...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGACTTCCCATCGGAGCTaGGGTGGAATATTTCGGATT +
Preference number: 4 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVTSHRS*GGIFRI
Trigger: AATCCGAAATATTCCACCCCAGCTCCGATGGGAAGT...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCATTCTCATCAGGGGTCTaGTCTCTTGGTACTACCACC +
Preference number: 4 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRAFSSGV*SLGTTT
Trigger: GGTGGTAGTACCAAGAGACCAGACCCCTGATGAGAA...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CATGGAGACAGAAGCCGTCAGTTAAAAATTCCTCTCAGATACAAACAGAAGCAATGTGATCCACCCTCTTaGTGGGGCCTGGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: HGDRSRQLKIPLRYKQKQCDPPS*WGLESF
Trigger: GAAGCTCTCCAGGCCCCACCAAGAGGGTGGATCACA...TTGCTTCTGTTTGTATCTGAGAGGAATTTTTAACTGACGGCTTCTGTCTCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CATGGAGACAGAAGCCGTCAGTTAAAAATTCCTCTCAGATACAAACAGAAGCAAAAGGTAACAGTGCCGTaGCTGGGAGTGCCCCACAAC +
Preference number: 4 (lower is better)
Translates to: HGDRSRQLKIPLRYKQKQKVTVP*LGVPHN
Trigger: GTTGTGGGGCACTCCCAGCCACGGCACTGTTACCTT...TTGCTTCTGTTTGTATCTGAGAGGAATTTTTAACTGACGGCTTCTGTCTCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCAGGGGAACTCCACGCATaGGCTTTTCCATATGTAGAG +
Preference number: 4 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRAGELHA*AFPYVE
Trigger: CTCTACATATGGAAAAGCCCATGCGTGGAGTTCCCC...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTCATTTGGGGTGTAACTaGCAGATGCAGCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: RKLAIALIQEQPLSASVCHLGCN*QMQLQS
Trigger: ACTTTGAAGCTGCATCTGCCAGTTACACCCCAAATG...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GCATATAGAGCCAGAGATGGAAAGCTGGGAGACCCTTTTTATGGTTGGGACAGGAGAAGTTCTCCTCCTTaGGTTTGCCATAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: AYRARDGKLGDPFYGWDRRSSPP*VCHRFF
Trigger: GAAGAATCTATGGCAAACTCAAGGAGGAGAACTTCT...CCTGTCCCAACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGGCTCTATATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCAACTGAATTTGCCAGATaGTGGACTTTAGCTTTATCG +
Preference number: 4 (lower is better)
Translates to: GATRECPREKMIRQEPVPTEFAR*WTLALS
Trigger: CGATAAAGCTAAAGTCCATCATCTGGCAAATTCAGT...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCTCAAAGAAACCCTGTTaGAGAGGTCTCAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: DFPAGQISTMSGALPNPSSKKPC*RGLSSG
Trigger: ACCAGAGCTGAGACCTCTTCAACAGGGTTTCTTTGA...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GCATATAGAGCCAGAGATGGAAAGCTGGGAGACCCTTTTTATGGTTGGGACAGGCATCGTTCCCTCTTCTaGGTAAGTGATGTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: AYRARDGKLGDPFYGWDRHRSLF*VSDVSE
Trigger: TTCTGAAACATCACTTACTCAGAAGAGGGAACGATG...CCTGTCCCAACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGGCTCTATATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CATGGAGACAGAAGCCGTCAGTTAAAAATTCCTCTCAGATACAAACAGAAGCAATTTCCTGCTCGGCCCTaGAACAATTCTCGATGGCCC +
Preference number: 4 (lower is better)
Translates to: HGDRSRQLKIPLRYKQKQFPARP*NNSRWP
Trigger: GGGCCATCGAGAATTGTTGCAGGGCCGAGCAGGAAA...TTGCTTCTGTTTGTATCTGAGAGGAATTTTTAACTGACGGCTTCTGTCTCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGACTACGCCCACATGTTaGGGTTGTCTTGTTGTTACT +
Preference number: 4 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVTTPTC*GCLVVT
Trigger: AGTAACAACAAGACAACCGCAACATGTGGGCGTAGT...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CATGGAGACAGAAGCCGTCAGTTAAAAATTCCTCTCAGATACAAACAGAAGCAAAAGGGAACTCGGCAGTaGTATCTCTGCAGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: HGDRSRQLKIPLRYKQKQKGTRQ*YLCSRG
Trigger: GCCCCTACTGCAGAGATAGCACTGCCGAGTTCCCTT...TTGCTTCTGTTTGTATCTGAGAGGAATTTTTAACTGACGGCTTCTGTCTCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCATACTGTGACAGGCTGTaGTGTTTCCCTTCTACTGGT +
Preference number: 4 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRAYCDRL*CFPSTG
Trigger: ACCAGTAGAAGGGAAACAGCACAGCCTGTCACAGTA...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp TACCACCTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGTCTTTCTCAATCAAGTaGGCAAACCTGATCTACAGC +
Preference number: 4 (lower is better)
Translates to: YHLCAPGHNVKPTRERDMSFSIK*ANLIYS
Trigger: GCTGTAGATCAGGTTTGCCCACTTGATTGAGAAAGA...CATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAGGTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GCATATAGAGCCAGAGATGGAAAGCTGGGAGACCCTTTTTATGGTTGGGACAGGGCTGATAATGATTCATaGAGACAGAAGCCGTCAGTT +
Preference number: 4 (lower is better)
Translates to: AYRARDGKLGDPFYGWDRADNDS*RQKPSV
Trigger: AACTGACGGCTTCTGTCTCCATGAATCATTATCAGC...CCTGTCCCAACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGGCTCTATATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGTGCTTCTATTCAATTTaGGCCAGACAATTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVCFYSI*ARQFWG
Trigger: CCCCCAGAATTGTCTGGCCCAAATTGAATAGAAGCA...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGTATGGTTGGGACAGGTaGAGAGGCTTAATTCTACTG +
Preference number: 4 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVYGWDR*RGLILL
Trigger: CAGTAGAATTAAGCCTCTCCACCTGTCCCAACCATA...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCAGGCAAACAGTCGAGTaGTTTGAATGGCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: DFPAGQISTMSGALPNPSRQTVE*FEWQSH
Trigger: GTGGCTTTGCCATTCAAACCACTCGACTGTTTGCCT...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp TACCACCTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGCCTTTCCTCACCATCTaGTCCAACAAAGCTATAGAA +
Preference number: 4 (lower is better)
Translates to: YHLCAPGHNVKPTRERDMPFLTI*SNKAIE
Trigger: TTCTATAGCTTTGTTGGACCAGATGGTGAGGAAAGG...CATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAGGTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCAGCAACGAGGAGATGGTaGTTTTTGTCTCGGTATCTT +
Preference number: 4 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRAATRRW*FLSRYL
Trigger: AAGATACCGAGACAAAAATCACCATCTCCTCGTTGC...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCAAATATAAAATCCGCCTaGGAACGATGGGAATCAGGG +
Preference number: 4 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRANIKSA*ERWESG
Trigger: CCCTGATTCCCATCGTTCTCAGGCGGATTTTATATT...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTTTCCTGATGATAGTCTaGACCAGATATCAAAGCATG +
Preference number: 4 (lower is better)
Translates to: RKLAIALIQEQPLSASVCFLMIV*TRYQSM
Trigger: CATGCTTTGATATCTGGTTCAGACTATCATCAGGAA...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCACTCTCGGTGTTCACTTaGTCACAGTTCTCTACTGTA +
Preference number: 4 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRALSVFT*SQFSTV
Trigger: TACAGTAGAGAACTGTGAGCAAGTGAACACCGAGAG...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCAGCTGCCGTCAAATTCTaGAACTCGTTCACCGTTTTT +
Preference number: 4 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRAAAVKF*NSFTVF
Trigger: AAAAACGGTGAACGAGTTGCAGAATTTGACGGCAGC...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCGCGTCCCCTTCCCAGTaGTCATATCCAATCATTAAA +
Preference number: 4 (lower is better)
Translates to: DFPAGQISTMSGALPNPSASPSQ*SYPIIK
Trigger: TTTAATGATTGGATATGAGCACTGGGAAGGGGACGC...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCAAAGGAAACTGAACACTaGAACAATCACATTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GATRECPREKMIRQEPVPKETEH*NNHISG
Trigger: ACCTGAAATGTGATTGTTGCAGTGTTCAGTTTCCTT...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCCCATCGGAGCTGGGGTaGAATATTTCGGATTTGAAT +
Preference number: 4 (lower is better)
Translates to: DFPAGQISTMSGALPNPSPSELG*NISDLN
Trigger: ATTCAAATCCGAAATATTCCACCCCAGCTCCGATGG...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCAAGGACAAACCTTTTGTaGCACAAGCCTCAACTCACT +
Preference number: 4 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRARTNLL*HKPQLT
Trigger: AGTGAGTTGAGGCTTGTGCCACAAAAGGTTTGTCCT...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCAATTAAAACAATCCAGTaGTCACTGGAAAATGTCTCC +
Preference number: 4 (lower is better)
Translates to: GATRECPREKMIRQEPVPIKTIQ*SLENVS
Trigger: GGAGACATTTTCCAGTGACCACTGGATTGTTTTAAT...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CAA 72 bp AATCATCCAAATCTCCCAAGTGCTTTTCGCGATAGCTaGTTATCTCACCAAGGATGGGGAAATGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: NHPNLPSAFRDS*LSHQGWGNGGA
Trigger: AGCACCTCCATTTCCCCATCCTTGGTGAGATAACAAGCTATCGCGAAAAGCACTTGGGAGATTTGGATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGGGAATATTTCGGATTTaGATTTTCCGGCTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVGIFRI*IFRLLC
Trigger: ACAAAGGAGCCGGAAAATTCAAATCCGAAATATTCC...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CATGGAGACAGAAGCCGTCAGTTAAAAATTCCTCTCAGATACAAACAGAAGCAATTACTCTGTCCCTTCTaGTGCTGCTGCTTAACCTGG +
Preference number: 4 (lower is better)
Translates to: HGDRSRQLKIPLRYKQKQLLCPF*CCCLTW
Trigger: CCAGGTTAAGCAGCAGCATCAGAAGGGACAGAGTAA...TTGCTTCTGTTTGTATCTGAGAGGAATTTTTAACTGACGGCTTCTGTCTCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTTTAATCTACAGATACTaGCAGTTCTTTTCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: RKLAIALIQEQPLSASVCLIYRY*QFFSLE
Trigger: CTCAAGGGAAAAGAACTGTCAGTATCTGTAGATTAA...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGCTTGCTGTACAATGCTaGTGGTATTCTGAATTGTTT +
Preference number: 4 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVLAVQC*WYSELF
Trigger: AAACAATTCAGAATACCAGCAGCATTGTACAGCAAG...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGTCAAAGCATGCTTGCTaGTGGAAATTCGCTTTAAAT +
Preference number: 4 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVSKHAC*WKFALN
Trigger: ATTTAAAGCGAATTTCCAGCAGCAAGCATGCTTTGA...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCATCAGGGTTCCTCACTaGAACATCTTTCTCAATCAA +
Preference number: 4 (lower is better)
Translates to: DFPAGQISTMSGALPNPSIRVPH*NIFLNQ
Trigger: TTGATTGAGAAAGATGTTCCAGTGAGGAACCCTGAT...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CATGGAGACAGAAGCCGTCAGTTAAAAATTCCTCTCAGATACAAACAGAAGCAACCAGGATCAAGATCCTaGAGAAAAGGGAGACTCCAA +
Preference number: 4 (lower is better)
Translates to: HGDRSRQLKIPLRYKQKQPGSRS*RKGRLQ
Trigger: TTGGAGTCTCCCTTTTCTCCAGGATCTTGATCCTGG...TTGCTTCTGTTTGTATCTGAGAGGAATTTTTAACTGACGGCTTCTGTCTCCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCACAGTTCTTTTCCCTTaGGTCAATACTGTAAGCAAA +
Preference number: 4 (lower is better)
Translates to: DFPAGQISTMSGALPNPSTVLFP*VNTVSK
Trigger: TTTGCTTACAGTATTGACTCAAGGGAAAAGAACTGT...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCACTATTGGTTAGGGAGTaGTTGGAATTAATCTACAGA +
Preference number: 4 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRALLVRE*LELIYR
Trigger: TCTGTAGATTAATTCCAATCACTCCCTAACCAATAG...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR GCA 90 bp CATGGAGACAGAAGCCGTCAGTTAAAAATTCCTCTCAGATACAAACAGAAGCAATTCTTCATTATTTCCTaGTCGGCCCTGCAACAATTC +
Preference number: 4 (lower is better)
Translates to: HGDRSRQLKIPLRYKQKQFFIIS*SALQQF
Trigger: GAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGAA...TTGCTTCTGTTTGTATCTGAGAGGAATTTTTAACTGACGGCTTCTGTCTCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CCA 90 bp CATGGAGACAGAAGCCGTCAGTTAAAAATTCCTCTCAGATACAAACAGAAGCAAACGTCTATCTTGGACTaGGTCTGTTTTGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: HGDRSRQLKIPLRYKQKQTSILD*VCFVML
Trigger: CAACATCACAAAACAGACCCAGTCCAAGATAGACGT...TTGCTTCTGTTTGTATCTGAGAGGAATTTTTAACTGACGGCTTCTGTCTCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR TCA 90 bp CATGGAGACAGAAGCCGTCAGTTAAAAATTCCTCTCAGATACAAACAGAAGCAATACTCTCCAATTTACTaGATTTGCCAGATGATGGAC +
Preference number: 4 (lower is better)
Translates to: HGDRSRQLKIPLRYKQKQYSPIY*ICQMMD
Trigger: GTCCATCATCTGGCAAATTCAGTAAATTGGAGAGTA...TTGCTTCTGTTTGTATCTGAGAGGAATTTTTAACTGACGGCTTCTGTCTCCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
3UTR CAA 72 bp ATCCCACTAAACCTTAACCACCAAACCATGCTCCTTTaGCTTTCTGGTGGTATAACTTACATGATTTTCCTG +
Preference number: 4 (lower is better)
Translates to: IPLNLNHQTMLL*LSGGITYMIFL
Trigger: CAGGAAAATCATGTAAGTTATACCACCAGAAAGCAAAAGGAGCATGGTTTGGTGGTTAAGGTTTAGTGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS CCA 90 bp ACGGCGCAGCTTCTTCCCTTCGGTCCGAAACCCCTCCGAGAGGGCTaGTGTGTCACGTTTCTCCGCGGCCGCCCTGGCGCCGCCTCTAAA +
Preference number: 5 (lower is better)
Translates to: TAQLLPFGPKPLREG*CVTFLRGRPGAASK
Trigger: TTTAGAGGCGGCGCCAGGGCGGCCGCGGAGAAACGTGACACACCAGCCCTCTCGGAGGGGTTTCGGACCGAAGGGAAGAAGCTGCGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS TCA 90 bp AGCAGCCCCAGTAACGCTGCTGGGAGGCGGCGGGACTGCGCTGGATaGAGCTGGGAAAAGACCTACAGCAGCCAGGTTCAGGCCAGGGAT +
Preference number: 5 (lower is better)
Translates to: SSPSNAAGRRRDCAG*SWEKTYSSQVQARD
Trigger: ATCCCTGGCCTGAACCTGGCTGCTGTAGGTCTTTTCCCAGCTTCATCCAGCGCAGTCCCGCCGCCTCCCAGCAGCGTTACTGGGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290341.8
ENST00000431824.2
CDS CCA 90 bp GCCTGCCGGGGAGAGCACACTCTCGATTTCTGCCCGTTGTTGTCCTaGACTCGAAGGGACAGGGAGGGGCTGGTCACTTCCTCCGTGCCT +
Preference number: 5 (lower is better)
Translates to: ACRGEHTLDFCPLLS*TRRDREGLVTSSVP
Trigger: AGGCACGGAGGAAGTGACCAGCCCCTCCCTGTCCCTTCGAGTCCAGGACAACAACGGGCAGAAATCGAGAGTGTGCTCTCCCCGGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS GCA 90 bp CCCACTCATTCTCAGGCCTGCCGGGGAGAGCACACTCTCGATTTCTaGCCGTTGTTGTCCTGGACTCGAAGGGACAGGGAGGGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: PTHSQACRGEHTLDF*PLLSWTRRDREGLV
Trigger: GACCAGCCCCTCCCTGTCCCTTCGAGTCCAGGACAACAACGGGCAGAAATCGAGAGTGTGCTCTCCCCGGCAGGCCTGAGAATGAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCACAGGGGTCTGGTCTCTaGGTACTACCACCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPQGSGL*VLPPQL
Trigger: CAGCTGAGGTGGTAGTACCAAGAGACCAGACCCCTG...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCAACAGTGTTGGGCCAATaGGGTGGGTGTTTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPTVLGQ*GGCLGL
Trigger: CAGCCCCAAACACCCACCCAATTGGCCCAACACTGT...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS TCA 90 bp GCTCCGCAAACACTTTCTCCAAGTCCGCGGGGGTCACGCTCTCGTTaGGGTTGCCGATGTAAAGCTTGTTCATGGTGGCGGTCTCGGGGC +
Preference number: 5 (lower is better)
Translates to: APQTLSPSPRGSRSR*GCRCKACSWWRSRG
Trigger: GCCCCGAGACCGCCACCATGAACAAGCTTTACATCGGCAACCTCAACGAGAGCGTGACCCCCGCGGACTTGGAGAAAGTGTTTGCGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290341.8
ENST00000510023.5
CDS GCA 90 bp TGTCCTGGACTCGAAGGGACAGGGAGGGGCTGGTCACTTCCTCCGTaGCTGGGCCTGGTTACTCTGTCCCTTCTGATGCTGCTGCTTAAC +
Preference number: 5 (lower is better)
Translates to: CPGLEGTGRGWSLPP*LGLVTLSLLMLLLN
Trigger: GTTAAGCAGCAGCATCAGAAGGGACAGAGTAACCAGGCCCAGGCACGGAGGAAGTGACCAGCCCCTCCCTGTCCCTTCGAGTCCAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCACCAAGGGCCAGCTGGTaGGTTGTTGGGCATTGTTTA +
Preference number: 5 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPPRASW*VVGHCL
Trigger: TAAACAATGCCCAACAACCAACCAGCTGGCCCTTGG...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCAGCTTACAAATCCACTTaGCCTCAGGGGAGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPAYKST*PQGRKL
Trigger: GAGCTTCCTCCCCTGAGGCAAAGTGGATTTGTAAGC...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCAAGCTTCACTTCCTCCTaGGGACCAAAGAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPSFTSS*GPKKFS
Trigger: GGAGAACTTCTTTGGTCCCAAGGAGGAAGTGAAGCT...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCACCAACTGGGCCCCCATaGAAGACTGAAAAAGGGCCC +
Preference number: 5 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSPTGPP*KTEKGP
Trigger: GGGCCCTTTTTCAGTCTTCAATGGGGGCCCAGTTGG...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS GCA 90 bp GGAGCAGCCCTCAGGGGTGGAGTGCACACTGATGGCTTTTTCAGCTaGACCTGCGTTCTCCTTCCTATGCACGTCTATCTTGGACTGGGT +
Preference number: 5 (lower is better)
Translates to: GAALRGGVHTDGFFS*TCVLLPMHVYLGLG
Trigger: ACCCAGTCCAAGATAGACGTGCATAGGAAGGAGAACGCAGGTGCAGCTGAAAAAGCCATCAGTGTGCACTCCACCCCTGAGGGCTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACGATTTCTGCCCGTTGTaGTCCTGGACTCGAAGGGAC +
Preference number: 5 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNDFCPL*SWTRRD
Trigger: GTCCCTTCGAGTCCAGGACAACAACGGGCAGAAATC...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTCTCGATTTCTGCCCGTaGTTGTCCTGGACTCGAAGG +
Preference number: 5 (lower is better)
Translates to: LSFPKVQPGADRPISRLPLDFCP*LSWTRR
Trigger: CCTTCGAGTCCAGGACAACAACGGGCAGAAATCGAG...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS TCA 90 bp TCATCTTACAAGCGGAGGAGCAGCCCTCAGGGGTGGAGTGCACACTaGTGGCTTTTTCAGCTGCACCTGCGTTCTCCTTCCTATGCACGT +
Preference number: 5 (lower is better)
Translates to: SSYKRRSSPQGWSAH*WLFQLHLRSPSYAR
Trigger: ACGTGCATAGGAAGGAGAACGCAGGTGCAGCTGAAAAAGCCATCAGTGTGCACTCCACCCCTGAGGGCTGCTCCTCCGCTTGTAAGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTAAGGGGGATGTCCACTaGCTGCTGCTTGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: RKLAIALIQEQPLSASVCKGDVH*LLLGWG
Trigger: GCCCCAGCCAAGCAGCAGCAAGTGGACATCCCCCTT...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCAGAGGGGCAGACAGTGTaGGGCCAATTGGGTGGGTGT +
Preference number: 5 (lower is better)
Translates to: GATRECPREKMIRQEPVPEGQTV*GQLGGC
Trigger: ACACCCACCCAATTGGCCCAACACTGTCTGCCCCTC...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CAAGGAGTTGCCCTAAGACCTAGCCTACGGGGCACAAGAGGGCCCGGCCCACCACATGTTGCGGTTGTCTaGTTGTTACTGTTGTTGCAA +
Preference number: 5 (lower is better)
Translates to: QGVALRPSLRGTRGPGPPHVAVV*LLLLLQ
Trigger: TTGCAACAACAGTAACAACAAGACAACCGCAACATG...TGGTGGGCCGGGCCCTCTTGTGCCCCGTAGGCTAGGTCTTAGGGCAACTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACACCTCGTCAGCCGTTTaGGTGTCCTTAGCCTCTTTA +
Preference number: 5 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNTSSAV*VSLASL
Trigger: TAAAGAGGCTAAGGACACCAAAACGGCTGACGAGGT...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCATCGGGTGGTGCAATCTaGATGGAGGCGCTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: GATRECPREKMIRQEPVPSGGAI*MEALAN
Trigger: GTTTGCCAGCGCCTCCATCAAGATTGCACCACCCGA...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTGGGGAGGAAGCTCTTTaGATTCACTCTGGTTTTGGG +
Preference number: 5 (lower is better)
Translates to: LSFPKVQPGADRPISRLPGEEAL*IHSGFG
Trigger: CCCAAAACCAGAGTGAATCAAAAGAGCTTCCTCCCC...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CATGGAGACAGAAGCCGTCAGTTAAAAATTCCTCTCAGATACAAACAGAAGCAAACCCCACCCCAGAAGTaGTCCCGAGCCCAGGGCGGG +
Preference number: 5 (lower is better)
Translates to: HGDRSRQLKIPLRYKQKQTPPQK*SRAQGG
Trigger: CCCGCCCTGGGCTCGGGACAACTTCTGGGGTGGGGT...TTGCTTCTGTTTGTATCTGAGAGGAATTTTTAACTGACGGCTTCTGTCTCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTCAGCTTCATGATGGCTaGCCTGGTCTGCTCCCGGTT +
Preference number: 5 (lower is better)
Translates to: RKLAIALIQEQPLSASVCQLHDG*PGLLPV
Trigger: AACCGGGAGCAGACCAGGCAAGCCATCATGAAGCTG...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp TACCACCTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGATGGTGGCCCCCTCCTaGCCAATAATGGCACCCACA +
Preference number: 5 (lower is better)
Translates to: YHLCAPGHNVKPTRERDMMVAPS*PIMAPT
Trigger: TGTGGGTGCCATTATTGGCAAGGAGGGGGCCACCAT...CATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAGGTGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CTCTCCTTCCCCAAAGTGCAACCAGGAGCCGACAGACCAATTTCTCGGCTCCCTGCACACTTGATAGCATaGTCCAGGGTAGCTAAAGTG +
Preference number: 5 (lower is better)
Translates to: LSFPKVQPGADRPISRLPAHLIA*SRVAKV
Trigger: CACTTTAGCTACCCTGGACAATGCTATCAAGTGTGC...AGGGAGCCGAGAAATTGGTCTGTCGGCTCCTGGTTGCACTTTGGGGAAGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCGCTTTTCGCGATAGCTaGTTATCTCACCAAGGATGG +
Preference number: 5 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESAFRDS*LSHQGW
Trigger: CCATCCTTGGTGAGATAACAAGCTATCGCGAAAAGC...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGTCGGCTCCCTACCCCTaGGCTTGGCAAACACCACAC +
Preference number: 5 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVSAPYP*AWQTPH
Trigger: GTGTGGTGTTTGCCAAGCCAAGGGGTAGGGAGCCGA...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCAGGTGGGAGGAAGGGGTaGCCTAGAGGCACCAGCTTC +
Preference number: 5 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRAGGRKG*PRGTSF
Trigger: GAAGCTGGTGCCTCTAGGCAACCCCTTCCTCCCACC...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCATCGGGAGCTCAGGGTaGGGTTCCAAGTCCCACCAC +
Preference number: 5 (lower is better)
Translates to: DFPAGQISTMSGALPNPSIGSSG*GSKSHH
Trigger: GTGGTGGGACTTGGAACCCAACCCTGAGCTCCCGAT...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp GGAGGAAGGGGTTGCCTAGAGGCACCAGCTTCTCCTGTGGAGCAAGAAGGCTCAGATATCAAAGCATGCTaGCTGCTGGAAATTCGCTTT +
Preference number: 5 (lower is better)
Translates to: GGRGCLEAPASPVEQEGSDIKAC*LLEIRF
Trigger: AAAGCGAATTTCCAGCAGCAAGCATGCTTTGATATC...TGAGCCTTCTTGCTCCACAGGAGAAGCTGGTGCCTCTAGGCAACCCCTTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS CCA 90 bp GAGGAAAGGTGGAAATGGATGGGGTGCAGAAGTTTTACACTAACATaGAGTCGAAGACTGGCTGAGACCCTGGACAACTGGAAGGCCTGT +
Preference number: 5 (lower is better)
Translates to: EERWKWMGCRSFTLT*SRRLAETLDNWKAC
Trigger: ACAGGCCTTCCAGTTGTCCAGGGTCTCAGCCAGTCTTCGACTCCATGTTAGTGTAAAACTTCTGCACCCCATCCATTTCCACCTTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510023.5
CDS-3UTR CAA 90 bp GCATATAGAGCCAGAGATGGAAAGCTGGGAGACCCTTTTTATGGTTGGGACAGGAGCCGCAAACTTTCTTaGCACCCCACCCCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: AYRARDGKLGDPFYGWDRSRKLS*HPTPEV
Trigger: AACTTCTGGGGTGGGGTGCAAAGAAAGTTTGCGGCT...CCTGTCCCAACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGGCTCTATATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCGTCTGTTTTGTGATGTaGCGGATGGTGGCCCCCTCC +
Preference number: 5 (lower is better)
Translates to: DFPAGQISTMSGALPNPSVCFVM*RMVAPS
Trigger: GGAGGGGGCCACCATCCGCAACATCACAAAACAGAC...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGAACCGGGAGAGCTGTTaGATGTGCTGCCCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVNRESC*MCCPFL
Trigger: CAAGAAGGGGCAGCACATCAAACAGCTCTCCCGGTT...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCAGACTACGCCCACATGTaGCGGTTGTCTTGTTGTTAC +
Preference number: 5 (lower is better)
Translates to: GATRECPREKMIRQEPVPDYAHM*RLSCCY
Trigger: GTAACAACAAGACAACCGCAACATGTGGGCGTAGTC...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCAAGACCCTTTTTATGGTaGGGACAGGTGGAGAGGCTT +
Preference number: 5 (lower is better)
Translates to: GATRECPREKMIRQEPVPRPFLW*GQVERL
Trigger: AAGCCTCTCCACCTGTCCCAACCATAAAAAGGGTCT...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS GCA 90 bp TTCAGGGGAACCTCGTCAGCCGTTTTGGTGTCCTTAGCCTCTTTATaGATAATCTCCAAGATCATCTTACAAGCGGAGGAGCAGCCCTCA +
Preference number: 5 (lower is better)
Translates to: FRGTSSAVLVSLASL*IISKIILQAEEQPS
Trigger: TGAGGGCTGCTCCTCCGCTTGTAAGATGATCTTGGAGATTATGCATAAAGAGGCTAAGGACACCAAAACGGCTGACGAGGTTCCCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCAGGTTCCGTCCTTCCTaGCCAATGAGACGCCCTACA +
Preference number: 5 (lower is better)
Translates to: DFPAGQISTMSGALPNPSRFRPS*PMRRPT
Trigger: TGTAGGGCGTCTCATTGGCAAGGAAGGACGGAACCT...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCAGTAAAGGGTAAGGTCTaGCAACGAGGAGATGGTGAT +
Preference number: 5 (lower is better)
Translates to: GATRECPREKMIRQEPVPVKGKV*QRGDGD
Trigger: ATCACCATCTCCTCGTTGCAAGACCTTACCCTTTAC...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp GCACAAGAGGGCCCGGCCCACCAAGACAGGTCCTTCATCCCACTAAACCTTAACTGTTCTGCATCTAAATaGTCGAGTATTTGGAAGGGA +
Preference number: 5 (lower is better)
Translates to: AQEGPAHQDRSFIPLNLNCSASK*SSIWKG
Trigger: TCCCTTCCAAATACTCGACAATTTAGATGCAGAACA...GTTAAGGTTTAGTGGGATGAAGGACCTGTCTTGGTGGGCCGGGCCCTCTTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTCTCAAAGAAACCCTGTaGAAGAGGTCTCAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: RKLAIALIQEQPLSASVCLKETL*KRSQLW
Trigger: CCAGAGCTGAGACCTCTTCAACAGGGTTTCTTTGAG...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS GCA 90 bp GTAAGGTCTTGCAACGAGGAGATGGTGATTTTTGTCTCGGTATCTTaGTCTACCTTCTTCAGGTTCCGTCCTTCCTTGCCAATGAGACGC +
Preference number: 5 (lower is better)
Translates to: VRSCNEEMVIFVSVS*STFFRFRPSLPMRR
Trigger: GCGTCTCATTGGCAAGGAAGGACGGAACCTGAAGAAGGTAGAGCAAGATACCGAGACAAAAATCACCATCTCCTCGTTGCAAGACCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290341.8
ENST00000431824.2
CDS-3UTR CAA 90 bp TACCACCTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGCGGCTCCTTTGTTTTTaGGGCACCGAATGTTCAATC +
Preference number: 5 (lower is better)
Translates to: YHLCAPGHNVKPTRERDMRLLCF*GTECSI
Trigger: GATTGAACATTCGGTGCCCAAAAAACAAAGGAGCCG...CATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAGGTGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp GCATATAGAGCCAGAGATGGAAAGCTGGGAGACCCTTTTTATGGTTGGGACAGGACTCTCGGTGTTCACTaGCTCACAGTTCTCTACTGT +
Preference number: 5 (lower is better)
Translates to: AYRARDGKLGDPFYGWDRTLGVH*LTVLYC
Trigger: ACAGTAGAGAACTGTGAGCAAGTGAACACCGAGAGT...CCTGTCCCAACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGGCTCTATATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTCTATGCACGTCTATCTaGGACTGGGTCTGTTTTGTG +
Preference number: 5 (lower is better)
Translates to: RKLAIALIQEQPLSASVCLCTSI*DWVCFV
Trigger: CACAAAACAGACCCAGTCCAAGATAGACGTGCATAG...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCAGTCTCGGATCTTCCGTaGAGCCATCTGACTGGCATA +
Preference number: 5 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRAVSDLP*SHLTGI
Trigger: TATGCCAGTCAGATGGCTCAACGGAAGATCCGAGAC...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CTCCCAGTTTCCAGGAGGCCTTCCTCCTCAGACAGCCAGGTATGTGTCGAAAGCTTAACTAGTATCTGTTaGCCCCTTAGATCTATGGAT +
Preference number: 5 (lower is better)
Translates to: LPVSRRPSSSDSQVCVESLTSIC*PLRSMD
Trigger: ATCCATAGATCTAAGGGGCAAACAGATACTAGTTAA...GCTTTCGACACATACCTGGCTGTCTGAGGAGGAAGGCCTCCTGGAAACTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp GCATATAGAGCCAGAGATGGAAAGCTGGGAGACCCTTTTTATGGTTGGGACAGGTCTGTCTGTCTGTCTTaGGCACAGAGGAAAATGGAC +
Preference number: 5 (lower is better)
Translates to: AYRARDGKLGDPFYGWDRSVCLS*AQRKMD
Trigger: GTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA...CCTGTCCCAACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGGCTCTATATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp GCATATAGAGCCAGAGATGGAAAGCTGGGAGACCCTTTTTATGGTTGGGACAGGAAACAGTCGAGTGGTTaGAATGGCAAAGCCACTAGG +
Preference number: 5 (lower is better)
Translates to: AYRARDGKLGDPFYGWDRKQSSG*NGKATR
Trigger: CCTAGTGGCTTTGCCATTCAAACCACTCGACTGTTT...CCTGTCCCAACCATAAAAAGGGTCTCCCAGCTTTCCATCTCTGGCTCTATATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCAGTGGGGAAATTTCAGTaGTGCCAATTTGAAGATGGT +
Preference number: 5 (lower is better)
Translates to: GATRECPREKMIRQEPVPVGKFQ*CQFEDG
Trigger: ACCATCTTCAAATTGGCACAACTGAAATTTCCCCAC...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGCTGCTTCTATTCAATTaGGGCCAGACAATTCTGGGG +
Preference number: 5 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVLLLFN*GQTILG
Trigger: CCCCAGAATTGTCTGGCCCAAATTGAATAGAAGCAG...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGAAGCTGGCTATTGCTTaGATTCAGGAACAGCCTCTC +
Preference number: 5 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVKLAIA*IQEQPL
Trigger: GAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTT...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCACAAGCCTCAACTCACTaGTCCTGGCTGGGATTCATA +
Preference number: 5 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRAQASTH*SWLGFI
Trigger: TATGAATCCCAGCCAGGACAAGTGAGTTGAGGCTTG...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp GGGGCTACAAGGGAATGTCCTAGGGAGAAAATGATAAGGCAGGAACCTGTCCCACCAGCTCTTCCCAATTaGCACTCATCAAAATACATC +
Preference number: 5 (lower is better)
Translates to: GATRECPREKMIRQEPVPPALPN*HSSKYI
Trigger: GATGTATTTTGATGAGTGCAAATTGGGAAGAGCTGG...TGGGACAGGTTCCTGCCTTATCATTTTCTCCCTAGGACATTCCCTTGTAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGAAGCTTATTTACCCCTaGCTGTACAATGCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVKLIYP*LYNAAG
Trigger: ACCAGCAGCATTGTACAGCAAGGGGTAAATAAGCTT...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp GATTTTCCTGCTGGGCAAATATCAACAATGAGTGGAGCCTTGCCTAATCCAAGCACTGTTGTTGCAATGTaGAAAGGAGGGGAACTCCAC +
Preference number: 5 (lower is better)
Translates to: DFPAGQISTMSGALPNPSTVVAM*KGGELH
Trigger: GTGGAGTTCCCCTCCTTTCAACATTGCAACAACAGT...GCTTGGATTAGGCAAGGCTCCACTCATTGTTGATATTTGCCCAGCAGGAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp TCTGTCTGTCTGTCTTTGGCACAGAGGAAAATGGACACAGAACCAACTAGAGCAGCCCACATGTTGCGGTaGTCTTGTTGTTACTGTTGT +
Preference number: 5 (lower is better)
Translates to: SVCLSLAQRKMDTEPTRAAHMLR*SCCYCC
Trigger: ACAACAGTAACAACAAGACAACCGCAACATGTGGGC...TGCTCTAGTTGGTTCTGTGTCCATTTTCCTCTGTGCCAAAGACAGACAGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CATGGAGACAGAAGCCGTCAGTTAAAAATTCCTCTCAGATACAAACAGAAGCAAACTTCGCACACAGCATaGCCTGACTACGCCCACATG +
Preference number: 5 (lower is better)
Translates to: HGDRSRQLKIPLRYKQKQTSHTA*PDYAHM
Trigger: CATGTGGGCGTAGTCAGGCAATGCTGTGTGCGAAGT...TTGCTTCTGTTTGTATCTGAGAGGAATTTTTAACTGACGGCTTCTGTCTCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CATGGAGACAGAAGCCGTCAGTTAAAAATTCCTCTCAGATACAAACAGAAGCAACCAACGGAAAAGGACTaGGGCTCAAGGTGTGAAGGG +
Preference number: 5 (lower is better)
Translates to: HGDRSRQLKIPLRYKQKQPTEKD*GSRCEG
Trigger: CCCTTCACACCTTGAGCCCAAGTCCTTTTCCGTTGG...TTGCTTCTGTTTGTATCTGAGAGGAATTTTTAACTGACGGCTTCTGTCTCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CGAAAGCTGGCTATTGCTTTGATTCAGGAACAGCCTCTCTCAGCCTCTGTCTGTCAAACCATGCTCCTTTaGCTTTCTGGTGGTATAACT +
Preference number: 5 (lower is better)
Translates to: RKLAIALIQEQPLSASVCQTMLL*LSGGIT
Trigger: AGTTATACCACCAGAAAGCAAAAGGAGCATGGTTTG...ACAGACAGAGGCTGAGAGAGGCTGTTCCTGAATCAAAGCAATAGCCAGCTTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGTTTTGTCTCGGTATCTaGCTCTACCTTCTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVFCLGI*LYLLQV
Trigger: AACCTGAAGAAGGTAGAGCAAGATACCGAGACAAAA...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGTTCAGTTGTGCCAATTaGAAGATGGTGATCTGGCAT +
Preference number: 5 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVFSCAN*KMVIWH
Trigger: ATGCCAGATCACCATCTTCAAATTGGCACAACTGAA...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CTATGTGCACCTGGACATAATGTGAAACCTACACGGGAGAGGGACATGAATGTGTGGAATATTTCGGATTaGAATTTTCCGGCTCCTTTG +
Preference number: 5 (lower is better)
Translates to: LCAPGHNVKPTRERDMNVWNISD*NFPAPL
Trigger: CAAAGGAGCCGGAAAATTCAAATCCGAAATATTCCA...CACATTCATGTCCCTCTCCCGTGTAGGTTTCACATTATGTCCAGGTGCACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CATGGAGACAGAAGCCGTCAGTTAAAAATTCCTCTCAGATACAAACAGAAGCAAATAACCATACGAACTTaGGAGTCAGGTGTTTCGGGT +
Preference number: 5 (lower is better)
Translates to: HGDRSRQLKIPLRYKQKQITIRT*ESGVSG
Trigger: ACCCGAAACACCTGACTCCAAAGTTCGTATGGTTAT...TTGCTTCTGTTTGTATCTGAGAGGAATTTTTAACTGACGGCTTCTGTCTCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS-3UTR CAA 90 bp CATGGAGACAGAAGCCGTCAGTTAAAAATTCCTCTCAGATACAAACAGAAGCAAGTTGCGGTTGTCTTGTaGTTACTGTTGTTGCAATGT +
Preference number: 5 (lower is better)
Translates to: HGDRSRQLKIPLRYKQKQVAVVL*LLLLQC
Trigger: ACATTGCAACAACAGTAACAACAAGACAACCGCAAC...TTGCTTCTGTTTGTATCTGAGAGGAATTTTTAACTGACGGCTTCTGTCTCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS GCA 72 bp GCGGAGAGGCCGGCGGCAGGAGCCGCAAACTTTCTTTaGACCCCACCCCAGAAGTTGTCCCGAGCCCAGGGC +
Preference number: 6 (lower is better)
Translates to: AERPAAGAANFL*TPPQKLSRAQG
Trigger: GCCCTGGGCTCGGGACAACTTCTGGGGTGGGGTGCAAAGAAAGTTTGCGGCTCCTGCCGCCGGCCTCTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290341.8
ENST00000510023.5
CDS CCA 72 bp CTTCTTCCCTTCGGTCCGAAACCCCTCCGAGAGGGCTaGTGTGTCACGTTTCTCCGCGGCCGCCCTGGCGCC +
Preference number: 6 (lower is better)
Translates to: LLPFGPKPLREG*CVTFLRGRPGA
Trigger: GGCGCCAGGGCGGCCGCGGAGAAACGTGACACACCAGCCCTCTCGGAGGGGTTTCGGACCGAAGGGAAGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS CAA 72 bp GGCGGAGAGGCCGGCGGCAGGAGCCGCAAACTTTCTTaGCACCCCACCCCAGAAGTTGTCCCGAGCCCAGGG +
Preference number: 6 (lower is better)
Translates to: GGEAGGRSRKLS*HPTPEVVPSPG
Trigger: CCCTGGGCTCGGGACAACTTCTGGGGTGGGGTGCAAAGAAAGTTTGCGGCTCCTGCCGCCGGCCTCTCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290341.8
ENST00000510023.5
CDS TCA 72 bp TCGGATTTGAATTTTCCGGCTCCTAACCCGGGAAGCTaGGCACTCGCCCTCCCACCCCGGCCTCTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: SDLNFPAPNPGS*ALALPPRPLGG
Trigger: CCCACCCAGAGGCCGGGGTGGGAGGGCGAGTGCTCAGCTTCCCGGGTTAGGAGCCGGAAAATTCAAATCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499130.6
CDS GCA 72 bp CTCGAAGGGACAGGGAGGGGCTGGTCACTTCCTCCGTaGCTGGGCCTGGTTACTCTGTCCCTTCTGATGCTG +
Preference number: 6 (lower is better)
Translates to: LEGTGRGWSLPP*LGLVTLSLLML
Trigger: CAGCATCAGAAGGGACAGAGTAACCAGGCCCAGGCACGGAGGAAGTGACCAGCCCCTCCCTGTCCCTTCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS CAA 90 bp CATTCTCAGGCCTGCCGGGGAGAGCACACTCTCGATTTCTGCCCGTaGTTGTCCTGGACTCGAAGGGACAGGGAGGGGCTGGTCACTTCC +
Preference number: 6 (lower is better)
Translates to: HSQACRGEHTLDFCP*LSWTRRDREGLVTS
Trigger: GGAAGTGACCAGCCCCTCCCTGTCCCTTCGAGTCCAGGACAACAACGGGCAGAAATCGAGAGTGTGCTCTCCCCGGCAGGCCTGAGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS TCA 72 bp AAGCGGAGGAGCAGCCCTCAGGGGTGGAGTGCACACTaGTGGCTTTTTCAGCTGCACCTGCGTTCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: KRRSSPQGWSAH*WLFQLHLRSPS
Trigger: GGAAGGAGAACGCAGGTGCAGCTGAAAAAGCCATCAGTGTGCACTCCACCCCTGAGGGCTGCTCCTCCGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS CCA 72 bp GGAGAGCACACTCTCGATTTCTGCCCGTTGTTGTCCTaGACTCGAAGGGACAGGGAGGGGCTGGTCACTTCC +
Preference number: 6 (lower is better)
Translates to: GEHTLDFCPLLS*TRRDREGLVTS
Trigger: GGAAGTGACCAGCCCCTCCCTGTCCCTTCGAGTCCAGGACAACAACGGGCAGAAATCGAGAGTGTGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS TCA 72 bp CGTCAGCCTGCCTGGTCTGCTCCCGGTTGGAATAGGTaGCATTCACCACTGCCGTCTCACTCTCGGTGTTCA +
Preference number: 6 (lower is better)
Translates to: RQPAWSAPGWNR*HSPLPSHSRCS
Trigger: TGAACACCGAGAGTGAGACGGCAGTGGTGAATGTCACCTATTCCAACCGGGAGCAGACCAGGCAGGCTGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431824.2
CDS CAA 72 bp GTCTGTTTTGTGATGTTGCGGATGGTGGCCCCCTCCTaGCCAATAATGGCACCCACATACTGGGTGGGCACC +
Preference number: 6 (lower is better)
Translates to: VCFVMLRMVAPS*PIMAPTYWVGT
Trigger: GGTGCCCACCCAGTATGTGGGTGCCATTATTGGCAAGGAGGGGGCCACCATCCGCAACATCACAAAACAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290341.8
CDS TCA 72 bp CTAATGAGTGCCTGGTCTGCTCCCGGTTGGAATAGGTaGCATTCACCACTGCCGTCTCACTCTCGGTGTTCA +
Preference number: 6 (lower is better)
Translates to: LMSAWSAPGWNR*HSPLPSHSRCS
Trigger: TGAACACCGAGAGTGAGACGGCAGTGGTGAATGTCACCTATTCCAACCGGGAGCAGACCAGGCACTCATTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000499130.6
ENST00000515586.5
CDS TCA 72 bp ACTTCCCATCGGAGCTGGGGTGGAATATTTCGGATTTaGATTTTCCGGCTCCTAACCCGGGAAGCTGAGCAC +
Preference number: 6 (lower is better)
Translates to: TSHRSWGGIFRI*IFRLLTREAEH
Trigger: GTGCTCAGCTTCCCGGGTTAGGAGCCGGAAAATTCAAATCCGAAATATTCCACCCCAGCTCCGATGGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499130.6
CDS CCA 72 bp CAGCAGGCTGTCCAGTACTTCCCATCGGAGCTGGGGTaGAATATTTCGGATTTGAATTTTCCGGCTCCTTTG +
Preference number: 6 (lower is better)
Translates to: QQAVQYFPSELG*NISDLNFPAPL
Trigger: CAAAGGAGCCGGAAAATTCAAATCCGAAATATTCCACCCCAGCTCCGATGGGAAGTACTGGACAGCCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290341.8
ENST00000431824.2
ENST00000515586.5
CDS CCA 72 bp CAGCAGGCTGTCCAGTACTTCCCATCGGAGCTGGGGTaGAATATTTCGGATTTGAATTTTCCGGCTCCTAAC +
Preference number: 6 (lower is better)
Translates to: QQAVQYFPSELG*NISDLNFPAPN
Trigger: GTTAGGAGCCGGAAAATTCAAATCCGAAATATTCCACCCCAGCTCCGATGGGAAGTACTGGACAGCCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499130.6
CDS TCA 72 bp CAGAAGTTTTACACTAACATGGAGTCGAAGACTGGCTaGGACCCTGGACAACTGGAAGGCCTGTTGTCTCTC +
Preference number: 6 (lower is better)
Translates to: QKFYTNMESKTG*DPGQLEGLLSL
Trigger: GAGAGACAACAGGCCTTCCAGTTGTCCAGGGTCTCAGCCAGTCTTCGACTCCATGTTAGTGTAAAACTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510023.5
CDS CCA 72 bp ATACTGAGCCAGCAGGCTGTCCAGTACCTAGGAGAATaGAGAAGGGAAGTACACTTAACTCTGAGTCCCAAG +
Preference number: 6 (lower is better)
Translates to: ILSQQAVQYLGE*RREVHLTLSPK
Trigger: CTTGGGACTCAGAGTTAAGTGTACTTCCCTTCTCCATTCTCCTAGGTACTGGACAGCCTGCTGGCTCAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505562.1
CDS CCA 72 bp TGGAAATGGATGGGGTGCAGAAGTTTTACACTAACATaGAGTCGAAGACTGGCTGAGACCCTGGACAACTGG +
Preference number: 6 (lower is better)
Translates to: WKWMGCRSFTLT*SRRLAETLDNW
Trigger: CCAGTTGTCCAGGGTCTCAGCCAGTCTTCGACTCCATGTTAGTGTAAAACTTCTGCACCCCATCCATTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510023.5
CDS CAA 90 bp GGTAAGGTCTTGCAACGAGGAGATGGTGATTTTTGTCTCGGTATCTaGCTCTACCTTCTTCAGGTTCCGTCCTTCCTTGCCAATGAGACG +
Preference number: 6 (lower is better)
Translates to: GKVLQRGDGDFCLGI*LYLLQVPSFLANET
Trigger: CGTCTCATTGGCAAGGAAGGACGGAACCTGAAGAAGGTAGAGCAAGATACCGAGACAAAAATCACCATCTCCTCGTTGCAAGACCTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290341.8
ENST00000431824.2
CDS GCA 72 bp TGCAACGAGGAGATGGTGATTTTTGTCTCGGTATCTTaGTCTACCTTCTTCAGGTTCCGTCCTTCCTTGCCA +
Preference number: 6 (lower is better)
Translates to: CNEEMVIFVSVS*STFFRFRPSLP
Trigger: TGGCAAGGAAGGACGGAACCTGAAGAAGGTAGAGCAAGATACCGAGACAAAAATCACCATCTCCTCGTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290341.8
ENST00000431824.2
CDS GCA 72 bp ACCTCGTCAGCCGTTTTGGTGTCCTTAGCCTCTTTATaGATAATCTCCAAGATCATCTTACAAGCGGAGGAG +
Preference number: 6 (lower is better)
Translates to: TSSAVLVSLASL*IISKIILQAEE
Trigger: CTCCTCCGCTTGTAAGATGATCTTGGAGATTATGCATAAAGAGGCTAAGGACACCAAAACGGCTGACGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290341.8