RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000167244

Ensembl transcript IDs: ENST00000381389.5, ENST00000381392.5, ENST00000381395.5, ENST00000381406.8, ENST00000416167.7, ENST00000418738.2, ENST00000434045.6

Found 827 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGAGGCCGAGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTaGTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCAAGCAACC +
Preference number: 1 (lower is better)
Translates to: QRPSPCRSPRRRGGG*YGITRPVGSGAQAT
Trigger: GGTTGCTTGGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACTCGGCCTCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 90 bp GCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTaGGCTCCGGGGCCCAAGCAACCTGGTCGATGGGCAGACCTGGCA +
Preference number: 1 (lower is better)
Translates to: ALGAAVVAAMASPDP*APGPKQPGRWADLA
Trigger: TGCCAGGTCTGCCCATCGACCAGGTTGCTTGGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR GCA 90 bp CGGGGCCCAAGCAACCTGGTCGATGGGCAGACCTGGCAGCTCTCCTaGTCTGTGGGCTCAGACCCGCCTGACCTCCCTACTCCCCGGCCT +
Preference number: 1 (lower is better)
Translates to: RGPSNLVDGQTWQLS*SVGSDPPDLPTPRP
Trigger: AGGCCGGGGAGTAGGGAGGTCAGGCGGGTCTGAGCCCACAGAGCAGGAGAGCTGCCAGGTCTGCCCATCGACCAGGTTGCTTGGGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 90 bp ACCCGTGGGCTCCGGGGCCCAAGCAACCTGGTCGATGGGCAGACCTaGCAGCTCTCCTGCTCTGTGGGCTCAGACCCGCCTGACCTCCCT +
Preference number: 1 (lower is better)
Translates to: TRGLRGPSNLVDGQT*QLSCSVGSDPPDLP
Trigger: AGGGAGGTCAGGCGGGTCTGAGCCCACAGAGCAGGAGAGCTGCCAGGTCTGCCCATCGACCAGGTTGCTTGGGCCCCGGAGCCCACGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 90 bp GCATCACCAGACCCGTGGGCTCCGGGGCCCAAGCAACCTGGTCGATaGGCAGACCTGGCAGCTCTCCTGCTCTGTGGGCTCAGACCCGCC +
Preference number: 1 (lower is better)
Translates to: ASPDPWAPGPKQPGR*ADLAALLLCGLRPA
Trigger: GGCGGGTCTGAGCCCACAGAGCAGGAGAGCTGCCAGGTCTGCCCATCGACCAGGTTGCTTGGGCCCCGGAGCCCACGGGTCTGGTGATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR TCA 90 bp GAGGTCCCACAGAGCTTCGGACCTCCTGGAGACAAGGCAGGGTGCTaGGGGGCGGGCAAGATGTCACCGAGGGAGAGGGGAGGGTTCCTC +
Preference number: 1 (lower is better)
Translates to: EVPQSFGPPGDKAGC*GAGKMSPRERGGFL
Trigger: GAGGAACCCTCCCCTCTCCCTCGGTGACATCTTGCCCGCCCCTCAGCACCCTGCCTTGTCTCCAGGAGGTCCGAAGCTCTGTGGGACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 90 bp TGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCAAGCAACCTaGTCGATGGGCAGACCTGGCAGCTCTCCTGCTCTGTGGGCTCAG +
Preference number: 1 (lower is better)
Translates to: CYGITRPVGSGAQAT*SMGRPGSSPALWAQ
Trigger: CTGAGCCCACAGAGCAGGAGAGCTGCCAGGTCTGCCCATCGACCAGGTTGCTTGGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR GCA 90 bp GAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTaGCCCAGCCTGATGGAACCCTCTGTTTACACACCTGCTAGCCCC +
Preference number: 1 (lower is better)
Translates to: EGEGRVPQVCGRRPP*PSLMEPSVYTPASP
Trigger: GGGGCTAGCAGGTGTGTAAACAGAGGGTTCCATCAGGCTGGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 90 bp GCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTaGGTGGGTGTCCTGACGAATGGGCAGGTAATTTGGGGTGCCTCG +
Preference number: 1 (lower is better)
Translates to: APGNTHSGEAEYNTG*VGVLTNGQVIWGAS
Trigger: CGAGGCACCCCAAATTACCTGCCCATTCGTCAGGACACCCACCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR GCA 90 bp TTCCAGGAGCACACCAGGGAGTCAGGCTACTCGTGGGGGCATGTCTaGTCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCAC +
Preference number: 1 (lower is better)
Translates to: FQEHTRESGYSWGHV*SATAISNVAKLLPH
Trigger: GTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGAGCAGACATGCCCCCACGAGTAGCCTGACTCCCTGGTGTGCTCCTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 90 bp CCAAGATCTTCCTTCCAGGAGCACACCAGGGAGTCAGGCTACTCGTaGGGGCATGTCTGCTCAGCTACCGCCATCTCCAATGTGGCCAAA +
Preference number: 1 (lower is better)
Translates to: PRSSFQEHTRESGYS*GHVCSATAISNVAK
Trigger: TTTGGCCACATTGGAGATGGCGGTAGCTGAGCAGACATGCCCCCACGAGTAGCCTGACTCCCTGGTGTGCTCCTGGAAGGAAGATCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR GCA 90 bp CACTGGGTGGGTGGGTGTCCTGACGAATGGGCAGGTAATTTGGGGTaGCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAAT +
Preference number: 1 (lower is better)
Translates to: HWVGGCPDEWAGNLG*LEAFWISGQCGFHN
Trigger: ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTGCCCATTCGTCAGGACACCCACCCACCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 90 bp GAGAAGGGAGATGGCGGTAGCAGCGACGTGCCCACCTGTGATTTCTaGGGTCCTTCTTTTCTCTTTGCTGGTTCAGGGACTCAAGTCCAG +
Preference number: 1 (lower is better)
Translates to: EKGDGGSSDVPTCDF*GPSFLFAGSGTQVQ
Trigger: CTGGACTTGAGTCCCTGAACCAGCAAAGAGAAAAGAAGGACCCCAGAAATCACAGGTGGGCACGTCGCTGCTACCGCCATCTCCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 90 bp AATTGTGACAATTTGGCTCTTTGGGCTTCTGTCCAATGTTCCGAATaGCCCACTCACAGGGCGCTTGCCGAGGGACCCTCTGCGACTGAG +
Preference number: 1 (lower is better)
Translates to: NCDNLALWASVQCSE*PTHRALAEGPSATE
Trigger: CTCAGTCGCAGAGGGTCCCTCGGCAAGCGCCCTGTGAGTGGGCCATTCGGAACATTGGACAGAAGCCCAAAGAGCCAAATTGTCACAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 90 bp TATAACACTGGGTGGGTGGGTGTCCTGACGAATGGGCAGGTAATTTaGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCC +
Preference number: 1 (lower is better)
Translates to: YNTGWVGVLTNGQVI*GASKRFGSQANVGS
Trigger: GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTGCCCATTCGTCAGGACACCCACCCACCCAGTGTTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR TCA 90 bp AAGCATGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTaGGTCAAACACGGGCCGCAAGGTGGACCGAGGCGGCAGGCACAG +
Preference number: 1 (lower is better)
Translates to: KHGILPEILALKELS*VKHGPQGGPRRQAQ
Trigger: CTGTGCCTGCCGCCTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCATGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR TCA 90 bp CCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATTGTaGCAATTTGGCTCTTTGGGCTTCTGTCCAATGTTCCGAATGGCC +
Preference number: 1 (lower is better)
Translates to: PRSVLDLRPMWVPQL*QFGSLGFCPMFRMA
Trigger: GGCCATTCGGAACATTGGACAGAAGCCCAAAGAGCCAAATTGTCACAATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 90 bp TGTCCTGACGAATGGGCAGGTAATTTGGGGTGCCTCGAAGCGTTTTaGATCTCAGGCCAATGTGGGTTCCACAATTGTGACAATTTGGCT +
Preference number: 1 (lower is better)
Translates to: CPDEWAGNLGCLEAF*ISGQCGFHNCDNLA
Trigger: AGCCAAATTGTCACAATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTGCCCATTCGTCAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 90 bp CGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATTGTGACAATTTaGCTCTTTGGGCTTCTGTCCAATGTTCCGAATGGCCCACTCACA +
Preference number: 1 (lower is better)
Translates to: RFGSQANVGSTIVTI*LFGLLSNVPNGPLT
Trigger: TGTGAGTGGGCCATTCGGAACATTGGACAGAAGCCCAAAGAGCCAAATTGTCACAATTGTGGAACCCACATTGGCCTGAGATCCAAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCGGGGGCAGGACGTGGTaGTCTCCAGGCTGGCTTCGT +
Preference number: 2 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPGGRTW*SPGWLR
Trigger: ACGAAGCCAGCCTGGAGACCACCACGTCCTGCCCCC...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCCGCCCTCAGGACTTCTaGGGACCAGCCACTGTCCCC +
Preference number: 2 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPRPQDF*GPATVP
Trigger: GGGGACAGTGGCTGGTCCCCAGAAGTCCTGAGGGCG...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACTGGTCAGGAGGAGGCTaGAGGATGGTGGCGCCGGGC +
Preference number: 2 (lower is better)
Translates to: TARLPTLPASVHGPRGLHWSGGG*RMVAPG
Trigger: GCCCGGCGCCACCATCCTGCAGCCTCCTCCTGACCA...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGCACTCACAGGGCGCTTaGCGAGGGACCCTCTGCGAC +
Preference number: 2 (lower is better)
Translates to: GTEVRQAARARMVSGPGEHSQGA*RGTLCD
Trigger: GTCGCAGAGGGTCCCTCGGCAAGCGCCCTGTGAGTG...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGGAGGCTGCAGGATGGTaGCGCCGGGCTGCAGACTTG +
Preference number: 2 (lower is better)
Translates to: SSARWRGPRRVACFGEAGEAAGW*RRAADL
Trigger: CAAGTCTGCAGCCCGGCGCCACCATCCTGCAGCCTC...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
3UTR-3UTR CCA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCCGCCCTCAGGACTTCTaGGGACCAGCCACTGTCCCC +
Preference number: 2 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPRPQDF*GPATVP
Trigger: GGGGACAGTGGCTGGTCCCCAGAAGTCCTGAGGGCG...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp CCACGACTAGGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCACTCCCCGCATCAGTaGACGGCCCCCGAGGACTCC +
Preference number: 2 (lower is better)
Translates to: PRLGTEVRQAARARMVSGHSPHQ*TAPEDS
Trigger: GGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTG...GCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCCTAGTCGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGGCTTCCTCAGCCCGATaGAGGGGGCCGAGGAGAGTA +
Preference number: 2 (lower is better)
Translates to: GTEVRQAARARMVSGPGEASSAR*RGPRRV
Trigger: TACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGC...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCAGCCAGGCCGGACAGTaGCCTTCTCCACTCCCCTCT +
Preference number: 2 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPSQAGQ*PSPLPS
Trigger: AGAGGGGAGTGGAGAAGGCCACTGTCCGGCCTGGCT...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGAGCTCTCCTGCTCTGTaGGCTCAGACCCGCCTGACC +
Preference number: 2 (lower is better)
Translates to: GTEVRQAARARMVSGPGESSPAL*AQTRLT
Trigger: GGTCAGGCGGGTCTGAGCCCACAGAGCAGGAGAGCT...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGTCGTGGGGGCATGTCTaGTCAGCTACCGCCATCTCC +
Preference number: 2 (lower is better)
Translates to: GTEVRQAARARMVSGPGESWGHV*SATAIS
Trigger: GGAGATGGCGGTAGCTGAGCAGACATGCCCCCACGA...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCTCGTGGGGGCATGTCTaGTCAGCTACCGCCATCTCC +
Preference number: 2 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPSWGHV*SATAIS
Trigger: GGAGATGGCGGTAGCTGAGCAGACATGCCCCCACGA...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGAACCTGGCAGCTCTCCTaGTCTGTGGGCTCAGACCCG +
Preference number: 2 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRTWQLS*SVGSDP
Trigger: CGGGTCTGAGCCCACAGAGCAGGAGAGCTGCCAGGT...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCAAGGTGTATCGGGAATaGGTGGGGTATGGGGAGCAT +
Preference number: 2 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPKVYRE*VGYGEH
Trigger: ATGCTCCCCATACCCCACCCATTCCCGATACACCTT...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGGGGACCCTCTGCGACTaGGGCGGACTGGCATGGACG +
Preference number: 2 (lower is better)
Translates to: QVPPGTPTPARQNITLGGGTLCD*GGLAWT
Trigger: CGTCCATGCCAGTCCGCCTCAGTCGCAGAGGGTCCC...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCGTGTGCTCATCTGTGTaGTGTGTGTGCTGTGCGTTT +
Preference number: 2 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPVCSSV*CVCCAF
Trigger: AAACGCACAGCACACACAGCACACAGATGAGCACAC...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp CCACGACTAGGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCGGGTGTATCCCAAATaGCGCCGGCCGCACACTCAG +
Preference number: 2 (lower is better)
Translates to: PRLGTEVRQAARARMVSGRVYPK*RRPHTQ
Trigger: CTGAGTGTGCGGCCGGCGGCATTTGGGATACACCCG...GCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCCTAGTCGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGGGAAGGCGGCCACCCTaGCCCAGCCTGATGGAACCC +
Preference number: 2 (lower is better)
Translates to: QVPPGTPTPARQNITLGGGRRPP*PSLMEP
Trigger: GGGTTCCATCAGGCTGGGGCAGGGTGGCCGCCTTCC...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp CCACGACTAGGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCAGCCAGGCCGGACAGTaGCCTTCTCCACTCCCCTCT +
Preference number: 2 (lower is better)
Translates to: PRLGTEVRQAARARMVSGSQAGQ*PSPLPS
Trigger: AGAGGGGAGTGGAGAAGGCCACTGTCCGGCCTGGCT...GCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCCTAGTCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGCGACGTGCCCACCTGTaGTTTCTGGGGTCCTTCTTT +
Preference number: 2 (lower is better)
Translates to: GTEVRQAARARMVSGPGERRAHL*FLGSFF
Trigger: AAAGAAGGACCCCAGAAATCACAGGTGGGCACGTCG...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCCGTGTTTGTGTGCTGTaGGCTGTGTTCATGTATGTG +
Preference number: 2 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPRVCVL*AVFMYV
Trigger: CACATACATGAACACAGCTCACAGCACACAAACACG...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGTGGTGGTCTCCAGGCTaGCTTCGTGCGTTCTTGCTT +
Preference number: 2 (lower is better)
Translates to: GTEVRQAARARMVSGPGEWWSPG*LRAFLL
Trigger: AAGCAAGAACGCACGAAGCCAGCCTGGAGACCACCA...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTGGTCAGGAGGAGGCTaGAGGATGGTGGCGCCGGGC +
Preference number: 2 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEWSGGG*RMVAPG
Trigger: GCCCGGCGCCACCATCCTGCAGCCTCCTCCTGACCA...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
3UTR-3UTR GCA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCTCTTGCTTTTGTCACTaGCCCCCTGTTACATGGGGG +
Preference number: 2 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPSCFCH*PPVTWG
Trigger: CCCCCATGTAACAGGGGGGCAGTGACAAAAGCAAGA...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp CCACGACTAGGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCGAGTCAGGCTACTCGTaGGGGCATGTCTGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: PRLGTEVRQAARARMVSGESGYS*GHVCSA
Trigger: AGCTGAGCAGACATGCCCCCACGAGTAGCCTGACTC...GCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCCTAGTCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CAA 90 bp TTTGGGCTTCTGTCCAATGTTCCGAATGGCCCACTCACAGGGCGCTaGCCGAGGGACCCTCTGCGACTGAGGCGGACTGGCATGGACGAC +
Preference number: 2 (lower is better)
Translates to: FGLLSNVPNGPLTGR*PRDPLRLRRTGMDD
Trigger: GTCGTCCATGCCAGTCCGCCTCAGTCGCAGAGGGTCCCTCGGCAAGCGCCCTGTGAGTGGGCCATTCGGAACATTGGACAGAAGCCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTTTTCGGGATGGAACCTaGTGGAAACGTCCGTGGTCA +
Preference number: 2 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPFRDGT*WKRPWS
Trigger: TGACCACGGACGTTTCCATCAGGTTCCATCCCGAAA...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCTGCTGTCAATCCTCCTaGCTTTTCCATCCAAAATCT +
Preference number: 2 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPCCQSS*LFHPKS
Trigger: AGATTTTGGATGGAAAAGTCAGGAGGATTGACAGCA...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGATGGTGGCGCCGGGCTaGAGACTTGCGGCAGTTTTG +
Preference number: 2 (lower is better)
Translates to: QVPPGTPTPARQNITLGGMVAPG*RLAAVL
Trigger: CAAAACTGCCGCAAGTCTGCAGCCCGGCGCCACCAT...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGGCGGTAGCAGCGACGTaGCCACCTGTGATTTCTGGG +
Preference number: 2 (lower is better)
Translates to: QVPPGTPTPARQNITLGGAVAAT*PPVISG
Trigger: CCCAGAAATCACAGGTGGGCACGTCGCTGCTACCGC...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTGTGCAACGTGTGTGCTaGGTGTTTGTGTGCTGTGAG +
Preference number: 2 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPVQRVC*VFVCCE
Trigger: CTCACAGCACACAAACACGCAGCACACACGTTGCAC...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGGGAATGGGTGGGGTATaGGGAGCATCGTGGCTCACG +
Preference number: 2 (lower is better)
Translates to: QVPPGTPTPARQNITLGGGMGGV*GASWLT
Trigger: CGTGAGCCACGATGCTCCCCATACCCCACCCATTCC...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTTGTATCGGGAATGGGTaGGGTATGGGGAGCATCGTG +
Preference number: 2 (lower is better)
Translates to: SNRQTSHTPRISARPPRTCIGNG*GMGSIV
Trigger: CACGATGCTCCCCATACCCCACCCATTCCCGATACA...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGAAAGGTGTATCGGGAATaGGTGGGGTATGGGGAGCAT +
Preference number: 2 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRKVYRE*VGYGEH
Trigger: ATGCTCCCCATACCCCACCCATTCCCGATACACCTT...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACCCGCCATCTCCAATGTaGCCAAACTCCTTCCTCACT +
Preference number: 2 (lower is better)
Translates to: TARLPTLPASVHGPRGLHPPSPM*PNSFLT
Trigger: AGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGG...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGGCGGGGCTCAGACCATaGAAACATTGGAGAATCTTA +
Preference number: 2 (lower is better)
Translates to: GTEVRQAARARMVSGPGEAGLRP*KHWRIL
Trigger: TAAGATTCTCCAATGTTTTCATGGTCTGAGCCCCGC...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp CCACGACTAGGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCTTGAAGATGCTGCTGTaGTTCCTCAGCCCGATGGAG +
Preference number: 2 (lower is better)
Translates to: PRLGTEVRQAARARMVSGLKMLL*FLSPME
Trigger: CTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAA...GCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCCTAGTCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGCTGTGTTCATGCGTGTaGTGTGTGTTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: GTEVRQAARARMVSGPGELCSCV*CVLCVC
Trigger: ACACACACACAACACACAGCACACGCATGAACACAG...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGAGTGTGCTCATCTGTGTaGTGTGTGTGCTGTGCGTTT +
Preference number: 2 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRVCSSV*CVCCAF
Trigger: AAACGCACAGCACACACAGCACACAGATGAGCACAC...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACTGTTCATGTGTGCTGTaGATGCGTGTGTGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: TARLPTLPASVHGPRGLHCSCVL*MRVCCV
Trigger: CACACAGCACACACGCATGCACAGCACACATGAACA...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGGCTGCAGGATGGTaGCGCCGGGCTGCAGACTTG +
Preference number: 2 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAEEAAGW*RRAADL
Trigger: CAAGTCTGCAGCCCGGCGCCACCATCCTGCAGCCTC...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
3UTR-3UTR CCA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCTCCTTTGGTCTTACTaGGTCCCTCTGACTGCTCTG +
Preference number: 2 (lower is better)
Translates to: SNRQTSHTPRISARPPRTLLWSY*VPLTAL
Trigger: CAGAGCAGTCAGAGGGACCCAGTAAGACCAAAGGAG...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGACGCTGCGGGGGCCGTaGGGACAGGCGCCAAGGAGG +
Preference number: 2 (lower is better)
Translates to: ISVKGVELSQTRAARWTETLRGP*GQAPRR
Trigger: CCTCCTTGGCGCCTGTCCCCACGGCCCCCGCAGCGT...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCTGGTCAGGAGGAGGCTaGAGGATGGTGGCGCCGGGC +
Preference number: 2 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAWSGGG*RMVAPG
Trigger: GCCCGGCGCCACCATCCTGCAGCCTCCTCCTGACCA...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
3UTR-3UTR GCA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACTGTGTTCATGCGTGTaGTGTGTGTTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRLCSCV*CVLCVC
Trigger: ACACACACACAACACACAGCACACGCATGAACACAG...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCGGAAGGCGGCCACCCTaGCCCAGCCTGATGGAACCC +
Preference number: 2 (lower is better)
Translates to: QVIWGASKRFGSQANVGSGRRPP*PSLMEP
Trigger: GGGTTCCATCAGGCTGGGGCAGGGTGGCCGCCTTCC...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACAGTGAGGAGCCAGTCTaGGTTGTTGCTATTTTCGGA +
Preference number: 2 (lower is better)
Translates to: TARLPTLPASVHGPRGLHSEEPV*VVAIFG
Trigger: TCCGAAAATAGCAACAACCCAGACTGGCTCCTCACT...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCAGGGCATCTCTGTCATaGTGGAAAGATGGAATTAGG +
Preference number: 2 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPRASLS*WKDGIR
Trigger: CCTAATTCCATCTTTCCACCATGACAGAGATGCCCT...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGGGGTGTCCTGACGAATaGGCAGGTAATTTGGGGTGC +
Preference number: 2 (lower is better)
Translates to: QVPPGTPTPARQNITLGGGCPDE*AGNLGC
Trigger: GCACCCCAAATTACCTGCCCATTCGTCAGGACACCC...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTAAGTCCAGGCCAATTTaGCTCAAAGTCCAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: SNRQTSHTPRISARPPRTKSRPI*LKVQGR
Trigger: TCTCCCTTGGACTTTGAGTCAAATTGGCCTGGACTT...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCCCTCTGACTGCTCTGTaGTTTTTAGTGATGGAAAAG +
Preference number: 2 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPPLTAL*FLVMEK
Trigger: CTTTTCCATCACTAAAAATCACAGAGCAGTCAGAGG...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp CCACGACTAGGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCTGTAAGATTTGGGGGTaGGGGTCGTGCCAATTACAT +
Preference number: 2 (lower is better)
Translates to: PRLGTEVRQAARARMVSGCKIWG*GSCQLH
Trigger: ATGTAATTGGCACGACCCTCACCCCCAAATCTTACA...GCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCCTAGTCGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGGGAAGGCGGCCACCCTaGCCCAGCCTGATGGAACCC +
Preference number: 2 (lower is better)
Translates to: ISVKGVELSQTRAARWTEGRRPP*PSLMEP
Trigger: GGGTTCCATCAGGCTGGGGCAGGGTGGCCGCCTTCC...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCGGCCTCACCCCACCTTaGCCCCAAGAGGTCCCACAG +
Preference number: 2 (lower is better)
Translates to: QVIWGASKRFGSQANVGSGLTPP*PQEVPQ
Trigger: CTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCC...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGCTGCAGGATGGTaGCGCCGGGCTGCAGACTTG +
Preference number: 2 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAEAAGW*RRAADL
Trigger: CAAGTCTGCAGCCCGGCGCCACCATCCTGCAGCCTC...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
3UTR-3UTR CCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGCCGCCATCTCCAATGTaGCCAAACTCCTTCCTCACT +
Preference number: 2 (lower is better)
Translates to: QVPPGTPTPARQNITLGGPPSPM*PNSFLT
Trigger: AGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGG...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTCCTCTGACTGCTCTGTaGTTTTTAGTGATGGAAAAG +
Preference number: 2 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPPLTAL*FLVMEK
Trigger: CTTTTCCATCACTAAAAATCACAGAGCAGTCAGAGG...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCATGGTGGCGCCGGGCTaGAGACTTGCGGCAGTTTTG +
Preference number: 2 (lower is better)
Translates to: GRGTERFSGWNLMETSVVMVAPG*RLAAVL
Trigger: CAAAACTGCCGCAAGTCTGCAGCCCGGCGCCACCAT...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
3UTR-3UTR GCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGATGGTGGCGCCGGGCTaGAGACTTGCGGCAGTTTTG +
Preference number: 2 (lower is better)
Translates to: GTERFSGWNLMETSVVRRMVAPG*RLAAVL
Trigger: CAAAACTGCCGCAAGTCTGCAGCCCGGCGCCACCAT...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
3UTR-3UTR GCA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATTGGTCAGGAGGAGGCTaGAGGATGGTGGCGCCGGGC +
Preference number: 2 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNWSGGG*RMVAPG
Trigger: GCCCGGCGCCACCATCCTGCAGCCTCCTCCTGACCA...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGCGCCGCGGTGGTGGCTaGTATGGCATCACCAGACCC +
Preference number: 2 (lower is better)
Translates to: ISVKGVELSQTRAARWTERRGGG*YGITRP
Trigger: GGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCG...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGCACTCACAGGGCGCTTaGCGAGGGACCCTCTGCGAC +
Preference number: 2 (lower is better)
Translates to: ISVKGVELSQTRAARWTEHSQGA*RGTLCD
Trigger: GTCGCAGAGGGTCCCTCGGCAAGCGCCCTGTGAGTG...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGGCAGGTAATTTGGGGTaGCTCGAAGCGTTTTGGATC +
Preference number: 2 (lower is better)
Translates to: QVPPGTPTPARQNITLGGAGNLG*LEAFWI
Trigger: GATCCAAAACGCTTCGAGGCACCCCAAATTACCTGC...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGGTTGCTATTTTCGGATaGCCAGTTTACCCTGAAAAT +
Preference number: 2 (lower is better)
Translates to: GTEVRQAARARMVSGPGEVAIFG*PVYPEN
Trigger: ATTTTCAGGGTAAACTGGCCATCCGAAAATAGCAAC...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTTTTCGGGATGGAACCTaGTGGAAACGTCCGTGGTCA +
Preference number: 2 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESFRDGT*WKRPWS
Trigger: TGACCACGGACGTTTCCATCAGGTTCCATCCCGAAA...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
3UTR-3UTR TCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTTTCGGGATGGAACCTaGTGGAAACGTCCGTGGTCA +
Preference number: 2 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEFRDGT*WKRPWS
Trigger: TGACCACGGACGTTTCCATCAGGTTCCATCCCGAAA...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
3UTR-3UTR TCA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTGGGATGCATAAAGTATaGGTGCTTTTTAGGATGGGA +
Preference number: 2 (lower is better)
Translates to: SNRQTSHTPRISARPPRTGMHKV*VLFRMG
Trigger: TCCCATCCTAAAAAGCACTCATACTTTATGCATCCC...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCATGGTGGCGCCGGGCTaGAGACTTGCGGCAGTTTTG +
Preference number: 2 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAMVAPG*RLAAVL
Trigger: CAAAACTGCCGCAAGTCTGCAGCCCGGCGCCACCAT...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
3UTR-3UTR GCA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCATGGTGGCGCCGGGCTaGAGACTTGCGGCAGTTTTG +
Preference number: 2 (lower is better)
Translates to: QVIWGASKRFGSQANVGSMVAPG*RLAAVL
Trigger: CAAAACTGCCGCAAGTCTGCAGCCCGGCGCCACCAT...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCGTGCAACGTGTGTGCTaGGTGTTTGTGTGCTGTGAG +
Preference number: 2 (lower is better)
Translates to: SATAISNVAKLLPHSGWAVQRVC*VFVCCE
Trigger: CTCACAGCACACAAACACGCAGCACACACGTTGCAC...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATGGCCTCACCCCACCTTaGCCCCAAGAGGTCCCACAG +
Preference number: 2 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNGLTPP*PQEVPQ
Trigger: CTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCC...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGATTTCTGAGCTTTTGTaGGGTGTTTCTAAAAAGCCA +
Preference number: 2 (lower is better)
Translates to: GTEVRQAARARMVSGPGEISELL*GVSKKP
Trigger: TGGCTTTTTAGAAACACCCCACAAAAGCTCAGAAAT...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp CCACGACTAGGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCTTCTTTTCTCTTTGCTaGTTCAGGGACTCAAGTCCA +
Preference number: 2 (lower is better)
Translates to: PRLGTEVRQAARARMVSGFFSLC*FRDSSP
Trigger: TGGACTTGAGTCCCTGAACCAGCAAAGAGAAAAGAA...GCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCCTAGTCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACGTTGCTATTTTCGGATaGCCAGTTTACCCTGAAAAT +
Preference number: 2 (lower is better)
Translates to: TARLPTLPASVHGPRGLHVAIFG*PVYPEN
Trigger: ATTTTCAGGGTAAACTGGCCATCCGAAAATAGCAAC...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGTTTCATCCAATTTTGTaGGGGTGTGCGTGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: QVPPGTPTPARQNITLGGFHPIL*GCACVC
Trigger: GCACACACACGCACACCCCCACAAAATTGGATGAAA...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGAGCTGGGGGCACAAGTaGGGGCGAGGTAAACCTCCC +
Preference number: 2 (lower is better)
Translates to: ISVKGVELSQTRAARWTESWGHK*GRGKPP
Trigger: GGGAGGTTTACCTCGCCCCCACTTGTGCCCCCAGCT...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGGGAGAGCTGCAAACCTaGGGACGCAAGGGGCTGGTC +
Preference number: 2 (lower is better)
Translates to: ISVKGVELSQTRAARWTEGELQT*GRKGLV
Trigger: GACCAGCCCCTTGCGTCCCCAGGTTTGCAGCTCTCC...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGCAGAGGCCGAGTCCCTaGCGCAGCCCTAGGCGCCGC +
Preference number: 2 (lower is better)
Translates to: WDFAGNISVKGVELSQTRQRPSP*RSPRRR
Trigger: GCGGCGCCTAGGGCTGCGGCAGGGACTCGGCCTCTG...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATAGCTCTCCTGCTCTGTaGGCTCAGACCCGCCTGACC +
Preference number: 2 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNSSPAL*AQTRLT
Trigger: GGTCAGGCGGGTCTGAGCCCACAGAGCAGGAGAGCT...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGGACAATTTGGCTCTTTaGGCTTCTGTCCAATGTTCC +
Preference number: 2 (lower is better)
Translates to: QVPPGTPTPARQNITLGGDNLAL*ASVQCS
Trigger: GGAACATTGGACAGAAGCCCAAAGAGCCAAATTGTC...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCGCGGGGCTCAGACCATaGAAACATTGGAGAATCTTA +
Preference number: 2 (lower is better)
Translates to: SATAISNVAKLLPHSGWAAGLRP*KHWRIL
Trigger: TAAGATTCTCCAATGTTTTCATGGTCTGAGCCCCGC...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGATGCATAAAGTATGAGTaGTTTTTAGGATGGGAATTG +
Preference number: 2 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRCIKYE*FLGWEL
Trigger: CAATTCCCATCCTAAAAAGCACTCATACTTTATGCA...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTGAGAGATTTTCGGGATaGAACCTGATGGAAACGTCC +
Preference number: 2 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESERFSG*NLMETS
Trigger: GGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTC...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
3UTR-3UTR CCA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCTTTCATCCAATTTTGTaGGGGTGTGCGTGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: SATAISNVAKLLPHSGWAFHPIL*GCACVC
Trigger: GCACACACACGCACACCCCCACAAAATTGGATGAAA...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCGACTGAGGCGGACTaGCATGGACGACCCCCGGGG +
Preference number: 2 (lower is better)
Translates to: WDFAGNISVKGVELSQTRATEAD*HGRPPG
Trigger: CCCCGGGGGTCGTCCATGCCAGTCCGCCTCAGTCGC...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CAA 90 bp CAAGCATGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTaGAGTCAAACACGGGCCGCAAGGTGGACCGAGGCGGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: QAWDFAGNISVKGVE*SQTRAARWTEAAGT
Trigger: TGTGCCTGCCGCCTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCATGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCTTTCGGGATGGAACCTaGTGGAAACGTCCGTGGTCA +
Preference number: 2 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAFRDGT*WKRPWS
Trigger: TGACCACGGACGTTTCCATCAGGTTCCATCCCGAAA...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
3UTR-3UTR TCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGTTTAAAGCCAATTTCTaGGCTTTTGTGGGGTGTTTC +
Preference number: 2 (lower is better)
Translates to: QVPPGTPTPARQNITLGGFKANF*AFVGCF
Trigger: GAAACACCCCACAAAAGCTCAGAAATTGGCTTTAAA...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCTCTTGCTTTTGTCACTaGCCCCCTGTTACATGGGGG +
Preference number: 2 (lower is better)
Translates to: QVIWGASKRFGSQANVGSSCFCH*PPVTWG
Trigger: CCCCCATGTAACAGGGGGGCAGTGACAAAAGCAAGA...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGATTTTCGGGATaGAACCTGATGGAAACGTCC +
Preference number: 2 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAEERFSG*NLMETS
Trigger: GGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTC...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
3UTR-3UTR CCA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCCTCCTTTGGTCTTACTaGGTCCCTCTGACTGCTCTG +
Preference number: 2 (lower is better)
Translates to: QVIWGASKRFGSQANVGSLLWSY*VPLTAL
Trigger: CAGAGCAGTCAGAGGGACCCAGTAAGACCAAAGGAG...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCCCTCTGACTGCTCTGTaGTTTTTAGTGATGGAAAAG +
Preference number: 2 (lower is better)
Translates to: SATAISNVAKLLPHSGWAPLTAL*FLVMEK
Trigger: CTTTTCCATCACTAAAAATCACAGAGCAGTCAGAGG...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCGCCAGTCTGGGTTGTTaGTATTTTCGGATGGCCAGT +
Preference number: 2 (lower is better)
Translates to: QVIWGASKRFGSQANVGSASLGC*YFRMAS
Trigger: ACTGGCCATCCGAAAATAGCAACAACCCAGACTGGC...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCTTCTTTTCTCTTTGCTaGTTCAGGGACTCAAGTCCA +
Preference number: 2 (lower is better)
Translates to: SATAISNVAKLLPHSGWAFFSLC*FRDSSP
Trigger: TGGACTTGAGTCCCTGAACCAGCAAAGAGAAAAGAA...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGGGGCCCAAGCAACCTaGTCGATGGGCAGACCTGGC +
Preference number: 2 (lower is better)
Translates to: WDFAGNISVKGVELSQTRGAQAT*SMGRPG
Trigger: GCCAGGTCTGCCCATCGACCAGGTTGCTTGGGCCCC...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGTGCCTCGAAGCGTTTTaGATCTCAGGCCAATGTGGG +
Preference number: 2 (lower is better)
Translates to: ISVKGVELSQTRAARWTECLEAF*ISGQCG
Trigger: CCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCA...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGGCCAGTCTGGGTTGTTaGTATTTTCGGATGGCCAGT +
Preference number: 2 (lower is better)
Translates to: ISVKGVELSQTRAARWTEASLGC*YFRMAS
Trigger: ACTGGCCATCCGAAAATAGCAACAACCCAGACTGGC...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGCGGGTGTATCCCAAATaGCGCCGGCCGCACACTCAG +
Preference number: 2 (lower is better)
Translates to: WDFAGNISVKGVELSQTRRVYPK*RRPHTQ
Trigger: CTGAGTGTGCGGCCGGCGGCATTTGGGATACACCCG...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CAA 90 bp GCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATTGTGACAATTaGGCTCTTTGGGCTTCTGTCCAATGTTCCGAATGGCCCACTCAC +
Preference number: 2 (lower is better)
Translates to: AFWISGQCGFHNCDN*ALWASVQCSEWPTH
Trigger: GTGAGTGGGCCATTCGGAACATTGGACAGAAGCCCAAAGAGCCAAATTGTCACAATTGTGGAACCCACATTGGCCTGAGATCCAAAACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGGACTCCACATTTCTTaGGGGGTCCCCAGGAGACGG +
Preference number: 2 (lower is better)
Translates to: WDFAGNISVKGVELSQTRGLHIS*GVPRRR
Trigger: CCGTCTCCTGGGGACCCCCCAAGAAATGTGGAGTCC...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATTGTAAGATTTGGGGGTaGGGGTCGTGCCAATTACAT +
Preference number: 2 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNCKIWG*GSCQLH
Trigger: ATGTAATTGGCACGACCCTCACCCCCAAATCTTACA...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATGCGGGGCTCAGACCATaGAAACATTGGAGAATCTTA +
Preference number: 2 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNAGLRP*KHWRIL
Trigger: TAAGATTCTCCAATGTTTTCATGGTCTGAGCCCCGC...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCTGCTGTCAATCCTCCTaGCTTTTCCATCCAAAATCT +
Preference number: 2 (lower is better)
Translates to: QVIWGASKRFGSQANVGSCCQSS*LFHPKS
Trigger: AGATTTTGGATGGAAAAGTCAGGAGGATTGACAGCA...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATTTTCATCCAATTTTGTaGGGGTGTGCGTGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNFHPIL*GCACVC
Trigger: GCACACACACGCACACCCCCACAAAATTGGATGAAA...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGAAGCAACCTGGTCGATaGGCAGACCTGGCAGCTCTC +
Preference number: 2 (lower is better)
Translates to: WDFAGNISVKGVELSQTRKQPGR*ADLAAL
Trigger: GAGAGCTGCCAGGTCTGCCCATCGACCAGGTTGCTT...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGCGACGTGCCCACCTGTaGTTTCTGGGGTCCTTCTTT +
Preference number: 2 (lower is better)
Translates to: WDFAGNISVKGVELSQTRRRAHL*FLGSFF
Trigger: AAAGAAGGACCCCAGAAATCACAGGTGGGCACGTCG...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGGGGATGCATAAAGTATaGGTGCTTTTTAGGATGGGA +
Preference number: 2 (lower is better)
Translates to: ISVKGVELSQTRAARWTEGMHKV*VLFRMG
Trigger: TCCCATCCTAAAAAGCACTCATACTTTATGCATCCC...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGTCCAATGTTCCGAATaGCCCACTCACAGGGCGCTT +
Preference number: 2 (lower is better)
Translates to: WDFAGNISVKGVELSQTRVQCSE*PTHRAL
Trigger: AAGCGCCCTGTGAGTGGGCCATTCGGAACATTGGAC...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGACAATTGTGACAATTTaGCTCTTTGGGCTTCTGTCC +
Preference number: 2 (lower is better)
Translates to: ISVKGVELSQTRAARWTETIVTI*LFGLLS
Trigger: GGACAGAAGCCCAAAGAGCCAAATTGTCACAATTGT...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGTTTCGGGATGGAACCTaGTGGAAACGTCCGTGGTCA +
Preference number: 2 (lower is better)
Translates to: WDFAGNISVKGVELSQTRFRDGT*WKRPWS
Trigger: TGACCACGGACGTTTCCATCAGGTTCCATCCCGAAA...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGTTGAAGATGCTGCTGTaGTTCCTCAGCCCGATGGAG +
Preference number: 2 (lower is better)
Translates to: WDFAGNISVKGVELSQTRLKMLL*FLSPME
Trigger: CTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAA...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR GCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGTGTGCTCATCTGTGTaGTGTGTGTGCTGTGCGTTT +
Preference number: 2 (lower is better)
Translates to: WDFAGNISVKGVELSQTRVCSSV*CVCCAF
Trigger: AAACGCACAGCACACACAGCACACAGATGAGCACAC...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR TCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGAAGTCCAGGCCAATTTaGCTCAAAGTCCAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: WDFAGNISVKGVELSQTRKSRPI*LKVQGR
Trigger: TCTCCCTTGGACTTTGAGTCAAATTGGCCTGGACTT...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGAATGGGCAGGTAATTTaGGGTGCCTCGAAGCGTTTT +
Preference number: 2 (lower is better)
Translates to: WDFAGNISVKGVELSQTRNGQVI*GASKRF
Trigger: AAAACGCTTCGAGGCACCCCAAATTACCTGCCCATT...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR GCA 72 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTaGTATGGCATCACCAGACCCGTGGGCTCCGGGGCC +
Preference number: 3 (lower is better)
Translates to: SPCRSPRRRGGG*YGITRPVGSGA
Trigger: GGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 72 bp GTATGGGGAGCATCGTGGCTCACGCTGCGGGGGCCGTaGGGACAGGCGCCAAGGAGGCCAGCCTCACAAGGG +
Preference number: 3 (lower is better)
Translates to: VWGASWLTLRGP*GQAPRRPASQG
Trigger: CCCTTGTGAGGCTGGCCTCCTTGGCGCCTGTCCCCACGGCCCCCGCAGCGTGAGCCACGATGCTCCCCATAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR TCA 72 bp CTGGCAGCTCTCCTGCTCTGTGGGCTCAGACCCGCCTaGCCTCCCTACTCCCCGGCCTCACCCCACCTTGCC +
Preference number: 3 (lower is better)
Translates to: LAALLLCGLRPA*PPYSPASPHLA
Trigger: GGCAAGGTGGGGTGAGGCCGGGGAGTAGGGAGGTCAGGCGGGTCTGAGCCCACAGAGCAGGAGAGCTGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR TCA 72 bp CACTCACAGGGCGCTTGCCGAGGGACCCTCTGCGACTaGGGCGGACTGGCATGGACGACCCCCGGGGTCATG +
Preference number: 3 (lower is better)
Translates to: HSQGACRGTLCD*GGLAWTTPGVM
Trigger: CATGACCCCGGGGGTCGTCCATGCCAGTCCGCCTCAGTCGCAGAGGGTCCCTCGGCAAGCGCCCTGTGAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 72 bp GCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTaGGCTCCGGGGCCCAAGCAACCTGGTCGATGGGCA +
Preference number: 3 (lower is better)
Translates to: AAVVAAMASPDP*APGPKQPGRWA
Trigger: TGCCCATCGACCAGGTTGCTTGGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CAA 90 bp CCACGACTAGGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCACTCACAGGGCGCTaGCCGAGGGACCCTCTGCGA +
Preference number: 3 (lower is better)
Translates to: PRLGTEVRQAARARMVSGPLTGR*PRDPLR
Trigger: TCGCAGAGGGTCCCTCGGCAAGCGCCCTGTGAGTGG...GCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCCTAGTCGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR GCA 72 bp GGACACACCCCGCCCACCCTACGGGTGTATCCCAAATaGCGCCGGCCGCACACTCAGGCCGCACCATCTGAG +
Preference number: 3 (lower is better)
Translates to: GHTPPTLRVYPK*RRPHTQAAPSE
Trigger: CTCAGATGGTGCGGCCTGAGTGTGCGGCCGGCGGCATTTGGGATACACCCGTAGGGTGGGCGGGGTGTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 72 bp ATCACCAGACCCGTGGGCTCCGGGGCCCAAGCAACCTaGTCGATGGGCAGACCTGGCAGCTCTCCTGCTCTG +
Preference number: 3 (lower is better)
Translates to: ITRPVGSGAQAT*SMGRPGSSPAL
Trigger: CAGAGCAGGAGAGCTGCCAGGTCTGCCCATCGACCAGGTTGCTTGGGCCCCGGAGCCCACGGGTCTGGTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR TCA 72 bp CAGAGCTTCGGACCTCCTGGAGACAAGGCAGGGTGCTaGGGGGCGGGCAAGATGTCACCGAGGGAGAGGGGA +
Preference number: 3 (lower is better)
Translates to: QSFGPPGDKAGC*GAGKMSPRERG
Trigger: TCCCCTCTCCCTCGGTGACATCTTGCCCGCCCCTCAGCACCCTGCCTTGTCTCCAGGAGGTCCGAAGCTCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR GCA 72 bp GATGTCACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTaGGGAAGGCGGCCACCCTGCCCCAGCCTGATGGAA +
Preference number: 3 (lower is better)
Translates to: DVTEGEGRVPQV*GRRPPCPSLME
Trigger: TTCCATCAGGCTGGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGTGACATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CAA 90 bp CCACGACTAGGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCTGTGCAGGTGGGTGCTaGCGTGTGCAACGTGTGTGC +
Preference number: 3 (lower is better)
Translates to: PRLGTEVRQAARARMVSGCAGGC*RVQRVC
Trigger: GCACACACGTTGCACACGCAAGCACCCACCTGCACA...GCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCCTAGTCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CAA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCTGTTTTCATCCAATTTaGTGGGGGTGTGCGTGTGTG +
Preference number: 3 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPCFHPI*WGCACV
Trigger: CACACACGCACACCCCCACAAAATTGGATGAAAACA...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR GCA 72 bp AGCAACCTGGTCGATGGGCAGACCTGGCAGCTCTCCTaGTCTGTGGGCTCAGACCCGCCTGACCTCCCTACT +
Preference number: 3 (lower is better)
Translates to: SNLVDGQTWQLS*SVGSDPPDLPT
Trigger: AGTAGGGAGGTCAGGCGGGTCTGAGCCCACAGAGCAGGAGAGCTGCCAGGTCTGCCCATCGACCAGGTTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CAA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCTGTCCTCCCCTCCTTaGGTCTTACTGGGTCCCTCT +
Preference number: 3 (lower is better)
Translates to: SNRQTSHTPRISARPPRTLSSPP*VLLGPS
Trigger: AGAGGGACCCAGTAAGACCAAAGGAGGGGAGGACAG...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CAA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCGTGTGTGCTGCGTGTTaGTGTGCTGTGAGCTGTGTT +
Preference number: 3 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPVCAAC*CAVSCV
Trigger: AACACAGCTCACAGCACACAAACACGCAGCACACAC...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CAA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGTGTGCAGGTGGGTGCTaGCGTGTGCAACGTGTGTGC +
Preference number: 3 (lower is better)
Translates to: QVPPGTPTPARQNITLGGCAGGC*RVQRVC
Trigger: GCACACACGTTGCACACGCAAGCACCCACCTGCACA...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CAA 90 bp CCACGACTAGGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCGTGCCTCGAAGCGTTTaGGATCTCAGGCCAATGTGG +
Preference number: 3 (lower is better)
Translates to: PRLGTEVRQAARARMVSGVPRSV*DLRPMW
Trigger: CCACATTGGCCTGAGATCCAAAACGCTTCGAGGCAC...GCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCCTAGTCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR GCA 72 bp GGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTaGCCCAGCCTGATGGAACCCTCTGTTTACACACCT +
Preference number: 3 (lower is better)
Translates to: GRVPQVCGRRPP*PSLMEPSVYTP
Trigger: AGGTGTGTAAACAGAGGGTTCCATCAGGCTGGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CAA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCTTTTTAGGATGGGAATaGAGATGTAAGATTTGGGGG +
Preference number: 3 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPFLGWE*RCKIWG
Trigger: CCCCCAAATCTTACATCTCAATTCCCATCCTAAAAA...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CAA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCCCTTTATTTTGCCAATaGTTTCTCAGCCAATTCGTT +
Preference number: 3 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPPLFCQ*FLSQFV
Trigger: AACGAATTGGCTGAGAAACAATTGGCAAAATAAAGG...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR TCA 72 bp GGGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTaGTGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: GDVEPRDFRDGT*WKRPWSGGGCR
Trigger: CCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
3UTR GCA 72 bp CACACCAGGGAGTCAGGCTACTCGTGGGGGCATGTCTaGTCAGCTACCGCCATCTCCAATGTGGCCAAACTC +
Preference number: 3 (lower is better)
Translates to: HTRESGYSWGHV*SATAISNVAKL
Trigger: GAGTTTGGCCACATTGGAGATGGCGGTAGCTGAGCAGACATGCCCCCACGAGTAGCCTGACTCCCTGGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 72 bp TCCTTCCAGGAGCACACCAGGGAGTCAGGCTACTCGTaGGGGCATGTCTGCTCAGCTACCGCCATCTCCAAT +
Preference number: 3 (lower is better)
Translates to: SFQEHTRESGYS*GHVCSATAISN
Trigger: ATTGGAGATGGCGGTAGCTGAGCAGACATGCCCCCACGAGTAGCCTGACTCCCTGGTGTGCTCCTGGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 72 bp GCCAAGGAGGCCAGCCTCACAAGGGCATCTCTGTCATaGTGGAAAGATGGAATTAGGCCTGGGACACACCCC +
Preference number: 3 (lower is better)
Translates to: AKEASLTRASLS*WKDGIRPGTHP
Trigger: GGGGTGTGTCCCAGGCCTAATTCCATCTTTCCACCATGACAGAGATGCCCTTGTGAGGCTGGCCTCCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 72 bp CTGGGCCAACACACAGTAAGTAAGGTGTATCGGGAATaGGTGGGGTATGGGGAGCATCGTGGCTCACGCTGC +
Preference number: 3 (lower is better)
Translates to: LGQHTVSKVYRE*VGYGEHRGSRC
Trigger: GCAGCGTGAGCCACGATGCTCCCCATACCCCACCCATTCCCGATACACCTTACTTACTGTGTGTTGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CAA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCAATTTCTGAGCTTTaGTGGGGTGTTTCTAAAAAG +
Preference number: 3 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRPISEL*WGVSKK
Trigger: CTTTTTAGAAACACCCCACAAAAGCTCAGAAATTGG...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CAA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCAGCCAGTCTGGGTTGTaGCTATTTTCGGATGGCCAG +
Preference number: 3 (lower is better)
Translates to: SATAISNVAKLLPHSGWASQSGL*LFSDGQ
Trigger: CTGGCCATCCGAAAATAGCAACAACCCAGACTGGCT...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR GCA 72 bp GGTGGGTGTCCTGACGAATGGGCAGGTAATTTGGGGTaGCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGG +
Preference number: 3 (lower is better)
Translates to: GGCPDEWAGNLG*LEAFWISGQCG
Trigger: CCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTGCCCATTCGTCAGGACACCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 72 bp AATTTGGCTCTTTGGGCTTCTGTCCAATGTTCCGAATaGCCCACTCACAGGGCGCTTGCCGAGGGACCCTCT +
Preference number: 3 (lower is better)
Translates to: NLALWASVQCSE*PTHRALAEGPS
Trigger: AGAGGGTCCCTCGGCAAGCGCCCTGTGAGTGGGCCATTCGGAACATTGGACAGAAGCCCAAAGAGCCAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 72 bp GGGTGGGTGGGTGTCCTGACGAATGGGCAGGTAATTTaGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAAT +
Preference number: 3 (lower is better)
Translates to: GWVGVLTNGQVI*GASKRFGSQAN
Trigger: ATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTGCCCATTCGTCAGGACACCCACCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR GCA 72 bp ATTCCCGTGAGAAGGGAGATGGCGGTAGCAGCGACGTaGCCACCTGTGATTTCTGGGGTCCTTCTTTTCTCT +
Preference number: 3 (lower is better)
Translates to: IPVRREMAVAAT*PPVISGVLLFS
Trigger: AGAGAAAAGAAGGACCCCAGAAATCACAGGTGGGCACGTCGCTGCTACCGCCATCTCCCTTCTCACGGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 72 bp AACACCCACTCCGGCGAGGCAGAATATAACACTGGGTaGGTGGGTGTCCTGACGAATGGGCAGGTAATTTGG +
Preference number: 3 (lower is better)
Translates to: NTHSGEAEYNTG*VGVLTNGQVIW
Trigger: CCAAATTACCTGCCCATTCGTCAGGACACCCACCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CAA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGCGATTTTGTACATGTTaGAAGATGCTGCTGTGCTTC +
Preference number: 3 (lower is better)
Translates to: QVPPGTPTPARQNITLGGRFCTC*KMLLCF
Trigger: GAAGCACAGCAGCATCTTCAAACATGTACAAAATCG...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR TCA 72 bp GCAGTGGAGATGGGAACAGGAGCGGGGCTCAGACCATaGAAACATTGGAGAATCTTAGCGGGACTTTGGCCT +
Preference number: 3 (lower is better)
Translates to: AVEMGTGAGLRP*KHWRILAGLWP
Trigger: AGGCCAAAGTCCCGCTAAGATTCTCCAATGTTTTCATGGTCTGAGCCCCGCTCCTGTTCCCATCTCCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR GCA 72 bp GCCAATCGATTTTGTACATGTTTGAAGATGCTGCTGTaGTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGT +
Preference number: 3 (lower is better)
Translates to: ANRFCTCLKMLL*FLSPMEGAEES
Trigger: ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAATCGATTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
3UTR-3UTR CAA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCCCAATTTCTGAGCTTTaGTGGGGTGTTTCTAAAAAG +
Preference number: 3 (lower is better)
Translates to: SATAISNVAKLLPHSGWAPISEL*WGVSKK
Trigger: CTTTTTAGAAACACCCCACAAAAGCTCAGAAATTGG...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR TCA 72 bp ATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTaGGTCAAACACGGGCCGCAAGGTGGACCGAGGCGG +
Preference number: 3 (lower is better)
Translates to: ILPEILALKELS*VKHGPQGGPRR
Trigger: CCGCCTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 72 bp GAATGGGCAGGTAATTTGGGGTGCCTCGAAGCGTTTTaGATCTCAGGCCAATGTGGGTTCCACAATTGTGAC +
Preference number: 3 (lower is better)
Translates to: EWAGNLGCLEAF*ISGQCGFHNCD
Trigger: GTCACAATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTGCCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR TCA 72 bp CTCCTTTGGTCTTACTGGGTCCCTCTGACTGCTCTGTaGTTTTTAGTGATGGAAAAGGGAGTGAGGAGCCAG +
Preference number: 3 (lower is better)
Translates to: LLWSYWVPLTAL*FLVMEKGVRSQ
Trigger: CTGGCTCCTCACTCCCTTTTCCATCACTAAAAATCACAGAGCAGTCAGAGGGACCCAGTAAGACCAAAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 72 bp AGTGAGGAGCCAGTCTGGGTTGTTGCTATTTTCGGATaGCCAGTTTACCCTGAAAATTCCCGTGAGAAGGGA +
Preference number: 3 (lower is better)
Translates to: SEEPVWVVAIFG*PVYPENSREKG
Trigger: TCCCTTCTCACGGGAATTTTCAGGGTAAACTGGCCATCCGAAAATAGCAACAACCCAGACTGGCTCCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CAA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGCTGTCCTCCCCTCCTTaGGTCTTACTGGGTCCCTCT +
Preference number: 3 (lower is better)
Translates to: WDFAGNISVKGVELSQTRLSSPP*VLLGPS
Trigger: AGAGGGACCCAGTAAGACCAAAGGAGGGGAGGACAG...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CAA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCGTGTGCTGTGCGTTaGTGTGCTGTGTGCTCGTGT +
Preference number: 3 (lower is better)
Translates to: WDFAGNISVKGVELSQTRACAVR*CAVCSC
Trigger: ACACGAGCACACAGCACACAAACGCACAGCACACGC...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CCA 72 bp TCTCAGGCCAATGTGGGTTCCACAATTGTGACAATTTaGCTCTTTGGGCTTCTGTCCAATGTTCCGAATGGC +
Preference number: 3 (lower is better)
Translates to: SQANVGSTIVTI*LFGLLSNVPNG
Trigger: GCCATTCGGAACATTGGACAGAAGCCCAAAGAGCCAAATTGTCACAATTGTGGAACCCACATTGGCCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CAA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCTTTTTAGGATGGGAATaGAGATGTAAGATTTGGGGG +
Preference number: 3 (lower is better)
Translates to: QVIWGASKRFGSQANVGSFLGWE*RCKIWG
Trigger: CCCCCAAATCTTACATCTCAATTCCCATCCTAAAAA...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CAA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATCAGACCATGAAAACATaGGAGAATCTTAGCGGGACT +
Preference number: 3 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNQTMKT*ENLSGT
Trigger: AGTCCCGCTAAGATTCTCCAATGTTTTCATGGTCTG...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CAA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATTTTTTAGGATGGGAATaGAGATGTAAGATTTGGGGG +
Preference number: 3 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNFLGWE*RCKIWG
Trigger: CCCCCAAATCTTACATCTCAATTCCCATCCTAAAAA...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR TCA 72 bp GTTTTGGATCTCAGGCCAATGTGGGTTCCACAATTGTaGCAATTTGGCTCTTTGGGCTTCTGTCCAATGTTC +
Preference number: 3 (lower is better)
Translates to: VLDLRPMWVPQL*QFGSLGFCPMF
Trigger: GAACATTGGACAGAAGCCCAAAGAGCCAAATTGTCACAATTGTGGAACCCACATTGGCCTGAGATCCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR-3UTR CAA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGTGTTTTCATCCAATTTaGTGGGGGTGTGCGTGTGTG +
Preference number: 3 (lower is better)
Translates to: WDFAGNISVKGVELSQTRCFHPI*WGCACV
Trigger: CACACACGCACACCCCCACAAAATTGGATGAAAACA...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCGGGGGAGGCGGTGACTaGGGGGCGGAGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPGGGGD*GAEWRL
Trigger: CAGCCTCCACTCCGCCCCCCAGTCACCGCCTCCCCC...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCGGAAGGCGGCCACCCTaGCCCAGCCTGATGGAACCC +
Preference number: 4 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPGRRPP*PSLMEP
Trigger: GGGTTCCATCAGGCTGGGGCAGGGTGGCCGCCTTCC...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCGGGCGTTGGCCCTCCTaGCGGACACTCCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPGRWPS*RTLLCQ
Trigger: CTGGCAGAGGAGTGTCCGGCAGGAGGGCCAACGCCC...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGGGGCAGGCAGGCCCCTaGGCAGGCGCTGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: GTEVRQAARARMVSGPGEGQAGP*AGAGWT
Trigger: AGTCCACCCAGCGCCTGCGCAGGGGCCTGCCTGCCC...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGCAGAGGCCGAGTCCCTaGCGCAGCCCTAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: GTEVRQAARARMVSGPGEQRPSP*RSPRRR
Trigger: GCGGCGCCTAGGGCTGCGGCAGGGACTCGGCCTCTG...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCGAGGCTGCAGGATGGTaGCGCCGGGCTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPEAAGW*RRAADL
Trigger: CAAGTCTGCAGCCCGGCGCCACCATCCTGCAGCCTC...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCCGGGTGTATCCCAAATaGCGCCGGCCGCACACTCAG +
Preference number: 4 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPRVYPK*RRPHTQ
Trigger: CTGAGTGTGCGGCCGGCGGCATTTGGGATACACCCG...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCACGGCTCACACGGCTTaGGGGCCTGCCTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPTAHTA*GPAWKS
Trigger: AGACTTCCAGGCAGGCCCGCAAGCCGTGTGAGCCGT...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381406.8
CDS-3UTR CCA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACGGGGGAGGCGGTGACTaGGGGGCGGAGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TARLPTLPASVHGPRGLHGGGGD*GAEWRL
Trigger: CAGCCTCCACTCCGCCCCCCAGTCACCGCCTCCCCC...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTCGATGGAGGCGCTGGTaGGCAGAGCGCGGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPRWRRW*AERGQA
Trigger: CGCCTGCCCGCGCTCTGCCCACCAGCGCCTCCATCG...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416167.7
CDS-3UTR TCA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCGGGGGAGAATTCGTCTaGTTGTCCAGGGAGGACGGG +
Preference number: 4 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPGGEFV*LSREDG
Trigger: CCCGTCCTCCCTGGACAATCAGACGAATTCTCCCCC...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGTGGTCAGGAGGAGGCTaGAGGATGGTGGCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGWSGGG*RMVAPG
Trigger: GCCCGGCGCCACCATCCTGCAGCCTCCTCCTGACCA...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGGGAAGGCGGCCACCCTaGCCCAGCCTGATGGAACCC +
Preference number: 4 (lower is better)
Translates to: GTEVRQAARARMVSGPGEGRRPP*PSLMEP
Trigger: GGGTTCCATCAGGCTGGGGCAGGGTGGCCGCCTTCC...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCGGGCGTTGGCCCTCCTaGCGGACACTCCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPGRWPS*RTLLCQ
Trigger: CTGGCAGAGGAGTGTCCGGCAGGAGGGCCAACGCCC...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGCCCCTGCGCAGGCGCTaGGTGGACTGCTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGPLRRR*VDCFQV
Trigger: CACCTGGAAGCAGTCCACCCAGCGCCTGCGCAGGGG...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGACGCCTCGAGCTCCTTaGCGAGCACGTGACCCCGGC +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGTPRAP*RARDPG
Trigger: GCCGGGGTCACGTGCTCGCCAAGGAGCTCGAGGCGT...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGAGCGACTGAGGCGGACTaGCATGGACGACCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRATEAD*HGRPPG
Trigger: CCCCGGGGGTCGTCCATGCCAGTCCGCCTCAGTCGC...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGACACGGGCCGCAAGGTaGACCGAGGCGGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: GTEVRQAARARMVSGPGETRAAR*TEAAGT
Trigger: TGTGCCTGCCGCCTCGGTCCACCTTGCGGCCCGTGT...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACCACTCCCCGCATCAGTaGACGGCCCCCGAGGACTCC +
Preference number: 4 (lower is better)
Translates to: TARLPTLPASVHGPRGLHHSPHQ*TAPEDS
Trigger: GGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTG...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGGGCCTCACCCCACCTTaGCCCCAAGAGGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: GTEVRQAARARMVSGPGEGLTPP*PQEVPQ
Trigger: CTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCC...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGCGCCGCGGTGGTGGCTaGTATGGCATCACCAGACCC +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGRRGGG*YGITRP
Trigger: GGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCG...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACACGCCTCGAGCTCCTTaGCGAGCACGTGACCCCGGC +
Preference number: 4 (lower is better)
Translates to: TARLPTLPASVHGPRGLHTPRAP*RARDPG
Trigger: GCCGGGGTCACGTGCTCGCCAAGGAGCTCGAGGCGT...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGAGTATGGGGAGCATCGTaGCTCACGCTGCGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRVWGAS*LTLRGP
Trigger: CGGCCCCCGCAGCGTGAGCCACGATGCTCCCCATAC...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGGGGGGCAGGACGTGGTaGTCTCCAGGCTGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: GTEVRQAARARMVSGPGEGGRTW*SPGWLR
Trigger: ACGAAGCCAGCCTGGAGACCACCACGTCCTGCCCCC...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCGCATCACCAGACCCGTaGGCTCCGGGGCCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPASPDP*APGPKQ
Trigger: TTGCTTGGGCCCCGGAGCCCACGGGTCTGGTGATGC...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGCAGCCCGGGCCAGGATaGTTAGTGGCCCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGQPGPG*LVAQGR
Trigger: TCTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTG...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCGAACAGCGGGCGTTaGCCCTCCTGCCGGACACTC +
Preference number: 4 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRPNSGR*PSCRTL
Trigger: GAGTGTCCGGCAGGAGGGCCAACGCCCGCTGTTCGG...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGGACGTTTGGCCTCCCTaGACGCCTCGAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGDVWPP*TPRAPW
Trigger: CCAAGGAGCTCGAGGCGTTCAGGGAGGCCAAACGTC...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR TCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGGGGCTCAGACCCGCCTaGCCTCCCTACTCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: QVPPGTPTPARQNITLGGGLRPA*PPYSPA
Trigger: GGCCGGGGAGTAGGGAGGTCAGGCGGGTCTGAGCCC...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTGGGACCCTCTGCGACTaGGGCGGACTGGCATGGACG +
Preference number: 4 (lower is better)
Translates to: SNRQTSHTPRISARPPRTGTLCD*GGLAWT
Trigger: CGTCCATGCCAGTCCGCCTCAGTCGCAGAGGGTCCC...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCACTCCCCGCATCAGTaGACGGCCCCCGAGGACTCC +
Preference number: 4 (lower is better)
Translates to: SNRQTSHTPRISARPPRTHSPHQ*TAPEDS
Trigger: GGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTG...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCAGGGTTCCTCAAGTGTaGGGAAGGCGGCCACCCTGC +
Preference number: 4 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPRVPQV*GRRPPC
Trigger: GCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCT...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTGGCCTCACCCCACCTTaGCCCCAAGAGGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPGLTPP*PQEVPQ
Trigger: CTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCC...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCGGGCGGGGTCTTGGGTaGGTAGAGCAATCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPGRGLG*VEQSGD
Trigger: GTCCCCTGATTGCTCTACCCACCCAAGACCCCGCCC...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGGCTTCCTCAGCCCGATaGAGGGGGCCGAGGAGAGTA +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGASSAR*RGPRRV
Trigger: TACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGC...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTAGGGCCGAGGGGCAGTaGAGATGGGAACAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPRAEGQ*RWEQER
Trigger: CCGCTCCTGTTCCCATCTCCACTGCCCCTCGGCCCT...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGAAGGGCCGAGGGGCAGTaGAGATGGGAACAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRRAEGQ*RWEQER
Trigger: CCGCTCCTGTTCCCATCTCCACTGCCCCTCGGCCCT...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGAGGGGCCCAAGCAACCTaGTCGATGGGCAGACCTGGC +
Preference number: 4 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRGAQAT*SMGRPG
Trigger: GCCAGGTCTGCCCATCGACCAGGTTGCTTGGGCCCC...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCGGAGAGCTGCAAACCTaGGGACGCAAGGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPGELQT*GRKGLV
Trigger: GACCAGCCCCTTGCGTCCCCAGGTTTGCAGCTCTCC...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGCTCTGTGGCAGGCGGTaGACGCTGCTGAAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGLCGRR*TLLKVS
Trigger: GCTCACCTTCAGCAGCGTCCACCGCCTGCCACAGAG...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381389.5
ENST00000434045.6
CDS-3UTR CCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGCGATCGAACGCTCTGTaGCAGGCGGTGGACGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGRSNAL*QAVDAA
Trigger: AGCAGCGTCCACCGCCTGCCACAGAGCGTTCGATCG...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381389.5
ENST00000434045.6
CDS-3UTR CCA 90 bp CCACGACTAGGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCGAACAGCGGGCGTTaGCCCTCCTGCCGGACACTC +
Preference number: 4 (lower is better)
Translates to: PRLGTEVRQAARARMVSGPNSGR*PSCRTL
Trigger: GAGTGTCCGGCAGGAGGGCCAACGCCCGCTGTTCGG...GCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCCTAGTCGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGGCAATCAGGGGACGGTaGCGTTTGGCCTCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGAIRGR*RLASLN
Trigger: GTTCAGGGAGGCCAAACGTCACCGTCCCCTGATTGC...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR TCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGGGCGGCAGGCACAGGTaGCATTCAGTGTTTGGCGTG +
Preference number: 4 (lower is better)
Translates to: GTEVRQAARARMVSGPGEGGRHR*HSVFGV
Trigger: CACGCCAAACACTGAATGTCACCTGTGCCTGCCGCC...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGGGGGGAGAATTCGTCTaGTTGTCCAGGGAGGACGGG +
Preference number: 4 (lower is better)
Translates to: GTEVRQAARARMVSGPGEGGEFV*LSREDG
Trigger: CCCGTCCTCCCTGGACAATCAGACGAATTCTCCCCC...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGGGCGGTAAGCAGCAATaGAGCACGAGGCGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGGGKQQ*STRRRP
Trigger: TGGCCTTCGCCTCGTGCTGCATTGCTGCTTACCGCC...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCGACTTGCGGCAGTTTTaGTCACTTCCGATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPDLRQF*SLPIAG
Trigger: GCCAGCAATCGGAAGTGAGCAAAACTGCCGCAAGTC...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCGTGCAACGTGTGTGCTaGGTGTTTGTGTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPVQRVC*VFVCCE
Trigger: CTCACAGCACACAAACACGCAGCACACACGTTGCAC...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGAAGGGTTCCTCAAGTGTaGGGAAGGCGGCCACCCTGC +
Preference number: 4 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRRVPQV*GRRPPC
Trigger: GCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCT...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCGGAATGGGTGGGGTATaGGGAGCATCGTGGCTCACG +
Preference number: 4 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPGMGGV*GASWLT
Trigger: CGTGAGCCACGATGCTCCCCATACCCCACCCATTCC...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTCGGTGGTGGCTGCTATaGCATCACCAGACCCGTGGG +
Preference number: 4 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPRWWLL*HHQTRG
Trigger: CCCACGGGTCTGGTGATGCCATAGCAGCCACCACCG...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACGGGCTGTCTTCGGGCTaGGGCGGGCCAGATGTTGTA +
Preference number: 4 (lower is better)
Translates to: TARLPTLPASVHGPRGLHGLSSG*GGPDVV
Trigger: TACAACATCTGGCCCGCCCCAGCCCGAAGACAGCCC...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGATTCCCATTGGTGTCTaGAAGCCGGCGACGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GTEVRQAARARMVSGPGEIPIGV*KPATLP
Trigger: CGGCAGCGTCGCCGGCTTCCAGACACCAATGGGAAT...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGAGCAATCAGGGGACGGTaGCGTTTGGCCTCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRAIRGR*RLASLN
Trigger: GTTCAGGGAGGCCAAACGTCACCGTCCCCTGATTGC...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTGGAGACGGGCAAAGATaGTCCCTAGGTGTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPGDGQR*SLGVLR
Trigger: CCGGAGCACACCTAGGGATCATCTTTGCCCGTCTCC...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGGGGCTCAGACCCGCCTaGCCTCCCTACTCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEGLRPA*PPYSPA
Trigger: GGCCGGGGAGTAGGGAGGTCAGGCGGGTCTGAGCCC...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTAGCACTCCTCAACGATaGCACGGCTGCGACGGCTCA +
Preference number: 4 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPSTPQR*HGCDGS
Trigger: TGAGCCGTCGCAGCCGTGGCATCGTTGAGGAGTGCT...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTGGGCAGGCAGGCCCCTaGGCAGGCGCTGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGGQAGP*AGAGWT
Trigger: AGTCCACCCAGCGCCTGCGCAGGGGCCTGCCTGCCC...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACATGGTGGCGCCGGGCTaGAGACTTGCGGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: TARLPTLPASVHGPRGLHMVAPG*RLAAVL
Trigger: CAAAACTGCCGCAAGTCTGCAGCCCGGCGCCACCAT...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGGTGTGTGCAGGTGGGTaGTTGCGTGTGCAACGTGTG +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGVCAGG*LRVQRV
Trigger: CACACGTTGCACACGCAAGCACCCACCTGCACACAC...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTTCGTGGGGGCATGTCTaGTCAGCTACCGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPSWGHV*SATAIS
Trigger: GGAGATGGCGGTAGCTGAGCAGACATGCCCCCACGA...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGATCGTGGGGGCATGTCTaGTCAGCTACCGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRSWGHV*SATAIS
Trigger: GGAGATGGCGGTAGCTGAGCAGACATGCCCCCACGA...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTCAGAGGCCGAGTCCCTaGCGCAGCCCTAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGQRPSP*RSPRRR
Trigger: GCGGCGCCTAGGGCTGCGGCAGGGACTCGGCCTCTG...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGCAGAGGCCGAGTCCCTaGCGCAGCCCTAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEQRPSP*RSPRRR
Trigger: GCGGCGCCTAGGGCTGCGGCAGGGACTCGGCCTCTG...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCGGAAGCCGGCGACGCTaGCGCCCACCTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SATAISNVAKLLPHSGWAGSRRR*RPPPCC
Trigger: GCAGCAGGGAGGTGGGCGGCAGCGTCGCCGGCTTCC...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGATCCCCACAGACGAACTaGAGGGTGTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRSPQTN*RVSTSS
Trigger: GGAGCTGGTGGACACCCTCCAGTTCGTCTGTGGGGA...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCGTGGGCGGGGTCTTaGGTGGGTAGAGCAATCAGG +
Preference number: 4 (lower is better)
Translates to: SNRQTSHTPRISARPPRTPWAGS*VGRAIR
Trigger: CCTGATTGCTCTACCCACCCAAGACCCCGCCCACGG...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTGCTTCCTCAGCCCGATaGAGGGGGCCGAGGAGAGTA +
Preference number: 4 (lower is better)
Translates to: SNRQTSHTPRISARPPRTASSAR*RGPRRV
Trigger: TACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGC...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTACGCTGCGGGGGCCGTaGGGACAGGCGCCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESTLRGP*GQAPRR
Trigger: CCTCCTTGGCGCCTGTCCCCACGGCCCCCGCAGCGT...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTGGAATGGGTGGGGTATaGGGAGCATCGTGGCTCACG +
Preference number: 4 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPGMGGV*GASWLT
Trigger: CGTGAGCCACGATGCTCCCCATACCCCACCCATTCC...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGGAGTCAGGCTACTCGTaGGGGCATGTCTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GTEVRQAARARMVSGPGEESGYS*GHVCSA
Trigger: AGCTGAGCAGACATGCCCCCACGAGTAGCCTGACTC...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCGGTGGTGGCTGCTATaGCATCACCAGACCCGTGGG +
Preference number: 4 (lower is better)
Translates to: SNRQTSHTPRISARPPRTRWWLL*HHQTRG
Trigger: CCCACGGGTCTGGTGATGCCATAGCAGCCACCACCG...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGGCTTGCGGGCCTGCCTaGAAGTCTGAAGTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGACGPA*KSEVEA
Trigger: GGCTTCTACTTCAGACTTCCAGGCAGGCCCGCAAGC...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381392.5
ENST00000381406.8
CDS-3UTR CCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGGCCCGATGGAGGCGCTaGTGGGCAGAGCGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEARWRR*WAERGQ
Trigger: CTGCCCGCGCTCTGCCCACCAGCGCCTCCATCGGGC...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416167.7
3UTR CAA 72 bp CTGTCCAATGTTCCGAATGGCCCACTCACAGGGCGCTaGCCGAGGGACCCTCTGCGACTGAGGCGGACTGGC +
Preference number: 4 (lower is better)
Translates to: LSNVPNGPLTGR*PRDPLRLRRTG
Trigger: GCCAGTCCGCCTCAGTCGCAGAGGGTCCCTCGGCAAGCGCCCTGTGAGTGGGCCATTCGGAACATTGGACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGCGAAGGCCAAGAAGGTaGGAAGCACCAGCATCGACT +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGRRPRR*EAPAST
Trigger: AGTCGATGCTGGTGCTTCTCACCTTCTTGGCCTTCG...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR TCA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCCGAAGGCCAAGAAGGTaGGAAGCACCAGCATCGACT +
Preference number: 4 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPRRPRR*EAPAST
Trigger: AGTCGATGCTGGTGCTTCTCACCTTCTTGGCCTTCG...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCAAGTCCAGGCCAATTTaGCTCAAAGTCCAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPKSRPI*LKVQGR
Trigger: TCTCCCTTGGACTTTGAGTCAAATTGGCCTGGACTT...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTGGAGACGGGCAAAGATaGTCCCTAGGTGTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: SNRQTSHTPRISARPPRTGDGQR*SLGVLR
Trigger: CCGGAGCACACCTAGGGATCATCTTTGCCCGTCTCC...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTGGCGGCAGGCACAGGTaGCATTCAGTGTTTGGCGTG +
Preference number: 4 (lower is better)
Translates to: SNRQTSHTPRISARPPRTGGRHR*HSVFGV
Trigger: CACGCCAAACACTGAATGTCACCTGTGCCTGCCGCC...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTAGCACTCCTCAACGATaGCACGGCTGCGACGGCTCA +
Preference number: 4 (lower is better)
Translates to: SNRQTSHTPRISARPPRTSTPQR*HGCDGS
Trigger: TGAGCCGTCGCAGCCGTGGCATCGTTGAGGAGTGCT...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGCACTCACAGGGCGCTTaGCGAGGGACCCTCTGCGAC +
Preference number: 4 (lower is better)
Translates to: QVPPGTPTPARQNITLGGHSQGA*RGTLCD
Trigger: GTCGCAGAGGGTCCCTCGGCAAGCGCCCTGTGAGTG...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGGGCCCAGGGGAGAGCTaGAAACCTGGGGACGCAAGG +
Preference number: 4 (lower is better)
Translates to: QVPPGTPTPARQNITLGGGPGES*KPGDAR
Trigger: CCTTGCGTCCCCAGGTTTGCAGCTCTCCCCTGGGCC...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGCGCGAAGCTGGAGGCTaGGTCCGCGGGCGCACCAGG +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAEREAGG*VRGRTR
Trigger: CCTGGTGCGCCCGCGGACGCAGCCTCCAGCTTCGCG...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381389.5
ENST00000434045.6
CDS-3UTR GCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGACAACGCCGGCGGCCTaGGAGCCGGACTGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAETTPAA*EPDCLR
Trigger: CCGCAGGCAGTCCGGCTCGCAGGCCGCCGGCGTTGT...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416167.7
CDS-3UTR CCA 90 bp CCACGACTAGGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCTCCCCACAGACGAACTaGAGGGTGTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PRLGTEVRQAARARMVSGSPQTN*RVSTSS
Trigger: GGAGCTGGTGGACACCCTCCAGTTCGTCTGTGGGGA...GCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCCTAGTCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGATGCCCACGGGGTATCTaGGGAAGTTGTCCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRCPRGI*GSCPEA
Trigger: TGCTTCCGGACAACTTCCCCAGATACCCCGTGGGCA...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGAGAGTCAGGCTACTCGTaGGGGCATGTCTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRESGYS*GHVCSA
Trigger: AGCTGAGCAGACATGCCCCCACGAGTAGCCTGACTC...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTGAGTCAGGCTACTCGTaGGGGCATGTCTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPESGYS*GHVCSA
Trigger: AGCTGAGCAGACATGCCCCCACGAGTAGCCTGACTC...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTGCGACTGAGGCGGACTaGCATGGACGACCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESATEAD*HGRPPG
Trigger: CCCCGGGGGTCGTCCATGCCAGTCCGCCTCAGTCGC...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGGTCCAATGTTCCGAATaGCCCACTCACAGGGCGCTT +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGVQCSE*PTHRAL
Trigger: AAGCGCCCTGTGAGTGGGCCATTCGGAACATTGGAC...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACGGGGAGGAGACAAGATaGAGAGCCACGACTAGGCAC +
Preference number: 4 (lower is better)
Translates to: TARLPTLPASVHGPRGLHGEETR*RATTRH
Trigger: GTGCCTAGTCGTGGCTCTCCATCTTGTCTCCTCCCC...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCGTAATTAATCCACTTTaGTTCGGCGAAGGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPVINPL*FGEGER
Trigger: CCTCTCGCCTTCGCCGAACCAAAGTGGATTAATTAC...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGGGCCGCCTTGCCCGATaGAGGCGCTGGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEGRLAR*RRWWAE
Trigger: CTCTGCCCACCAGCGCCTCCATCGGGCAAGGCGGCC...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416167.7
CDS-3UTR TCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTCGACGTGCCCACCTGTaGTTTCTGGGGTCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPRRAHL*FLGSFF
Trigger: AAAGAAGGACCCCAGAAATCACAGGTGGGCACGTCG...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTTTCTCCACTCCCCTCTaGCTTCTCCAAGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SNRQTSHTPRISARPPRTFSTPL*LLQGGS
Trigger: TGAGCCCCCTTGGAGAAGTCAGAGGGGAGTGGAGAA...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTGGGACCCTCTGCGACTaGGGCGGACTGGCATGGACG +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGGTLCD*GGLAWT
Trigger: CGTCCATGCCAGTCCGCCTCAGTCGCAGAGGGTCCC...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGTCCCTGTCCACGTCCTaGGGGCGCGCGGCCGACCCA +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRSLSTS*GRAADP
Trigger: TGGGTCGGCCGCGCGCCCTCAGGACGTGGACAGGGA...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR GCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGGGGCAGGCAGGCCCCTaGGCAGGCGCTGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRGQAGP*AGAGWT
Trigger: AGTCCACCCAGCGCCTGCGCAGGGGCCTGCCTGCCC...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTGGGCAGGCAGGCCCCTaGGCAGGCGCTGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGGQAGP*AGAGWT
Trigger: AGTCCACCCAGCGCCTGCGCAGGGGCCTGCCTGCCC...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGGGGCAGGCAGGCCCCTaGGCAGGCGCTGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRGQAGP*AGAGWT
Trigger: AGTCCACCCAGCGCCTGCGCAGGGGCCTGCCTGCCC...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTGGAAGGCGGCCACCCTaGCCCAGCCTGATGGAACCC +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGGRRPP*PSLMEP
Trigger: GGGTTCCATCAGGCTGGGGCAGGGTGGCCGCCTTCC...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGCGCGAAGCTGGAGGCTaGGTCCGCGGGCGCACCAGG +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRREAGG*VRGRTR
Trigger: CCTGGTGCGCCCGCGGACGCAGCCTCCAGCTTCGCG...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381389.5
ENST00000434045.6
CDS-3UTR GCA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTAACCAGTGCCCGCTGTaGGCGGGGTTGGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFNQCPL*AGLGKL
Trigger: CAGCTTCCCCAACCCCGCGCACAGCGGGCACTGGTT...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR CCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTCCCCTGCGCAGGCGCTaGGTGGACTGCTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGPLRRR*VDCFQV
Trigger: CACCTGGAAGCAGTCCACCCAGCGCCTGCGCAGGGG...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGACGCTGCGGGGGCCGTaGGGACAGGCGCCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRTLRGP*GQAPRR
Trigger: CCTCCTTGGCGCCTGTCCCCACGGCCCCCGCAGCGT...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTTGTATCGGGAATGGGTaGGGTATGGGGAGCATCGTG +
Preference number: 4 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPCIGNG*GMGSIV
Trigger: CACGATGCTCCCCATACCCCACCCATTCCCGATACA...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACTGTATCGGGAATGGGTaGGGTATGGGGAGCATCGTG +
Preference number: 4 (lower is better)
Translates to: TARLPTLPASVHGPRGLHCIGNG*GMGSIV
Trigger: CACGATGCTCCCCATACCCCACCCATTCCCGATACA...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGAAGGTGTATCGGGAATaGGTGGGGTATGGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGKVYRE*VGYGEH
Trigger: ATGCTCCCCATACCCCACCCATTCCCGATACACCTT...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGAGCTCTCCTGCTCTGTaGGCTCAGACCCGCCTGACC +
Preference number: 4 (lower is better)
Translates to: QVPPGTPTPARQNITLGGSSPAL*AQTRLT
Trigger: GGTCAGGCGGGTCTGAGCCCACAGAGCAGGAGAGCT...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTGCATCACCAGACCCGTaGGCTCCGGGGCCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFASPDP*APGPKQ
Trigger: TTGCTTGGGCCCCGGAGCCCACGGGTCTGGTGATGC...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGGGAGAGCTGCAAACCTaGGGACGCAAGGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: QVPPGTPTPARQNITLGGGELQT*GRKGLV
Trigger: GACCAGCCCCTTGCGTCCCCAGGTTTGCAGCTCTCC...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACATTGGGATTCCCATTaGTGTCTGGAAGCCGGCGAC +
Preference number: 4 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRHWDSH*CLEAGD
Trigger: GTCGCCGGCTTCCAGACACCAATGGGAATCCCAATG...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTGCCCGGTCGCTTTCCTaGACACGGGGAAGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESARSLS*TRGSPP
Trigger: GGGAGGGCTTCCCCGTGTCCAGGAAAGCGACCGGGC...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR TCA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACTTTCGGGATGGAACCTaGTGGAAACGTCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: TARLPTLPASVHGPRGLHFRDGT*WKRPWS
Trigger: TGACCACGGACGTTTCCATCAGGTTCCATCCCGAAA...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCCCTCTGACTGCTCTGTaGTTTTTAGTGATGGAAAAG +
Preference number: 4 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPPLTAL*FLVMEK
Trigger: CTTTTCCATCACTAAAAATCACAGAGCAGTCAGAGG...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCGGGATGCATAAAGTATaGGTGCTTTTTAGGATGGGA +
Preference number: 4 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPGMHKV*VLFRMG
Trigger: TCCCATCCTAAAAAGCACTCATACTTTATGCATCCC...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCAACGATGCCACGGCTaGGACGGCTCACACGGCTTG +
Preference number: 4 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFQRCHG*DGSHGL
Trigger: CAAGCCGTGTGAGCCGTCGCAGCCGTGGCATCGTTG...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGGGCAGGCAGGCCCCTaGGCAGGCGCTGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQEGQAGP*AGAGWT
Trigger: AGTCCACCCAGCGCCTGCGCAGGGGCCTGCCTGCCC...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGGGCAGGCAGGCCCCTaGGCAGGCGCTGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAGQAGP*AGAGWT
Trigger: AGTCCACCCAGCGCCTGCGCAGGGGCCTGCCTGCCC...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTTTGAAGATGCTGCTGTaGTTCCTCAGCCCGATGGAG +
Preference number: 4 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPLKMLL*FLSPME
Trigger: CTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAA...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGGTGTGCTCATCTGTGTaGTGTGTGTGCTGTGCGTTT +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGVCSSV*CVCCAF
Trigger: AAACGCACAGCACACACAGCACACAGATGAGCACAC...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACTCTTGCTTTTGTCACTaGCCCCCTGTTACATGGGGG +
Preference number: 4 (lower is better)
Translates to: TARLPTLPASVHGPRGLHSCFCH*PPVTWG
Trigger: CCCCCATGTAACAGGGGGGCAGTGACAAAAGCAAGA...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTACCTGGCAGCTCTCCTaGTCTGTGGGCTCAGACCCG +
Preference number: 4 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFTWQLS*SVGSDP
Trigger: CGGGTCTGAGCCCACAGAGCAGGAGAGCTGCCAGGT...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGCGCCGCGGTGGTGGCTaGTATGGCATCACCAGACCC +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGERRGGG*YGITRP
Trigger: GGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCG...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGGCAGGTAATTTGGGGTaGCTCGAAGCGTTTTGGATC +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGAGNLG*LEAFWI
Trigger: GATCCAAAACGCTTCGAGGCACCCCAAATTACCTGC...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGGGCTGGTCGGCAAGTaGCCCCGGGAACACCCACTC +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAEGLVGK*PREHPL
Trigger: GAGTGGGTGTTCCCGGGGGCACTTGCCGACCAGCCC...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCGGAAGCCGGCGACGCTaGCGCCCACCTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QVIWGASKRFGSQANVGSGSRRR*RPPPCC
Trigger: GCAGCAGGGAGGTGGGCGGCAGCGTCGCCGGCTTCC...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGACGCGGGGCCGCCTTaGCCGATGGAGGCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGADAGPP*PMEALV
Trigger: CACCAGCGCCTCCATCGGGCAAGGCGGCCCCGCGTC...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416167.7
CDS-3UTR CCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGACGCCTCGAGCTCCTTaGCGAGCACGTGACCCCGGC +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAETPRAP*RARDPG
Trigger: GCCGGGGTCACGTGCTCGCCAAGGAGCTCGAGGCGT...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTGAGGCTGCAGGATGGTaGCGCCGGGCTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESEAAGW*RRAADL
Trigger: CAAGTCTGCAGCCCGGCGCCACCATCCTGCAGCCTC...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTGCTTCCTCAGCCCGATaGAGGGGGCCGAGGAGAGTA +
Preference number: 4 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFASSAR*RGPRRV
Trigger: TACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGC...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGAGGGCCGAGGGGCAGTaGAGATGGGAACAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGERAEGQ*RWEQER
Trigger: CCGCTCCTGTTCCCATCTCCACTGCCCCTCGGCCCT...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGGGGGGCAGGACGTGGTaGTCTCCAGGCTGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEGGRTW*SPGWLR
Trigger: ACGAAGCCAGCCTGGAGACCACCACGTCCTGCCCCC...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTGGGTGTCCTGACGAATaGGCAGGTAATTTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: SNRQTSHTPRISARPPRTGCPDE*AGNLGC
Trigger: GCACCCCAAATTACCTGCCCATTCGTCAGGACACCC...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTGTGACATTCAGTGTTTaGCGTGGGGGTCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPVTFSV*RGGLQV
Trigger: CACCTGAAGACCCCCACGCCAAACACTGAATGTCAC...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTGCGCCCAGCTCGGTTTaGGCCGACGGAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGAPSSV*ADGALC
Trigger: GCAGAGGGCTCCGTCGGCCCAAACCGAGCTGGGCGC...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCCATCTCCGCGAAGCTaGAGGCTGCGTCCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGPSPRS*RLRPRA
Trigger: CGCCCGCGGACGCAGCCTCCAGCTTCGCGGAGATGG...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR TCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTGACGTTTGGCCTCCCTaGACGCCTCGAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGDVWPP*TPRAPW
Trigger: CCAAGGAGCTCGAGGCGTTCAGGGAGGCCAAACGTC...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR TCA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTGCAATCAGGGGACGGTaGCGTTTGGCCTCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFAIRGR*RLASLN
Trigger: GTTCAGGGAGGCCAAACGTCACCGTCCCCTGATTGC...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR TCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGGCGGGGCTCAGACCATaGAAACATTGGAGAATCTTA +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGAGLRP*KHWRIL
Trigger: TAAGATTCTCCAATGTTTTCATGGTCTGAGCCCCGC...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTGGAGACGGGCAAAGATaGTCCCTAGGTGTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFGDGQR*SLGVLR
Trigger: CCGGAGCACACCTAGGGATCATCTTTGCCCGTCTCC...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGGGGACCCTCTGCGACTaGGGCGGACTGGCATGGACG +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRGTLCD*GGLAWT
Trigger: CGTCCATGCCAGTCCGCCTCAGTCGCAGAGGGTCCC...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCTTAAAGGAGTTGAGTTaGGTCAAACACGGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPLKELS*VKHGPQ
Trigger: TTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAA...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGACGGCTCACACGGCTTaGGGGCCTGCTGAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: QVPPGTPTPARQNITLGGTAHTA*GPAEVE
Trigger: TTCTACTTCAGCAGGCCCGCAAGCCGTGTGAGCCGT...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381395.5
ENST00000416167.7
CDS-3UTR GCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTCAACGATGCCACGGCTaGGACGGCTCACACGGCTTG +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESQRCHG*DGSHGL
Trigger: CAAGCCGTGTGAGCCGTCGCAGCCGTGGCATCGTTG...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGCAACGATGCCACGGCTaGGACGGCTCACACGGCTTG +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEQRCHG*DGSHGL
Trigger: CAAGCCGTGTGAGCCGTCGCAGCCGTGGCATCGTTG...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACATATTGGAAGAACTTaGCCACGGGGTATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRHIGRT*PRGIWG
Trigger: TCCCCAGATACCCCGTGGGCAAGTTCTTCCAATATG...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGTGGTCAGGAGGAGGCTaGAGGATGGTGGCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRWSGGG*RMVAPG
Trigger: GCCCGGCGCCACCATCCTGCAGCCTCCTCCTGACCA...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGTGGTCAGGAGGAGGCTaGAGGATGGTGGCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRWSGGG*RMVAPG
Trigger: GCCCGGCGCCACCATCCTGCAGCCTCCTCCTGACCA...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACGCCAGTCTGGGTTGTTaGTATTTTCGGATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: TARLPTLPASVHGPRGLHASLGC*YFRMAS
Trigger: ACTGGCCATCCGAAAATAGCAACAACCCAGACTGGC...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp CCACGACTAGGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCTCTTGCTTTTGTCACTaGCCCCCTGTTACATGGGGG +
Preference number: 4 (lower is better)
Translates to: PRLGTEVRQAARARMVSGSCFCH*PPVTWG
Trigger: CCCCCATGTAACAGGGGGGCAGTGACAAAAGCAAGA...GCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCCTAGTCGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTCGCCCACCTCCCTGCTaGGTGTCGCAAACCGAACAG +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGRPPPC*VSQTEQ
Trigger: CTGTTCGGTTTGCGACACGCAGCAGGGAGGTGGGCG...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGGAGGCCCGAAACCAGTaGCCGCTGTGCGCGGGGTTG +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRREARNQ*PLCAGL
Trigger: CAACCCCGCGCACAGCGGGCACTGGTTTCGGGCCTC...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR GCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTGGAGACTGGGGGCAATaGCCGGTCGCTTTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGGDWGQ*PVAFLD
Trigger: GTCCAGGAAAGCGACCGGGCATTGCCCCCAGTCTCC...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR CCA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGCACAGGGTCTCACTaGGGCGGTAAGCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFRTGSH*GGKQQC
Trigger: GCATTGCTGCTTACCGCCCCAGTGAGACCCTGTGCG...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGTGCCCACGGGGTATCTaGGGAAGTTGTCCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: QVPPGTPTPARQNITLGGCPRGI*GSCPEA
Trigger: TGCTTCCGGACAACTTCCCCAGATACCCCGTGGGCA...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGATTCCAGGTGTCATATTaGAAGAACTTGCCCACGGGG +
Preference number: 4 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRFQVSY*KNLPTG
Trigger: CCCCGTGGGCAAGTTCTTCCAATATGACACCTGGAA...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCCCCTGCGCAGGCGCTaGGTGGACTGCTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGPLRRR*VDCFQV
Trigger: CACCTGGAAGCAGTCCACCCAGCGCCTGCGCAGGGG...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCCCCCTGCGCAGGCGCTaGGTGGACTGCTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GRGTERFSGWNLMETSVVPLRRR*VDCFQV
Trigger: CACCTGGAAGCAGTCCACCCAGCGCCTGCGCAGGGG...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTACGCCTCGAGCTCCTTaGCGAGCACGTGACCCCGGC +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGTPRAP*RARDPG
Trigger: GCCGGGGTCACGTGCTCGCCAAGGAGCTCGAGGCGT...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTGGGCGGGGTCTTGGGTaGGTAGAGCAATCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESGRGLG*VEQSGD
Trigger: GTCCCCTGATTGCTCTACCCACCCAAGACCCCGCCC...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCGGGCGGGGTCTTGGGTaGGTAGAGCAATCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: SATAISNVAKLLPHSGWAGRGLG*VEQSGD
Trigger: GTCCCCTGATTGCTCTACCCACCCAAGACCCCGCCC...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTCCGTGGGCGGGGTCTTaGGTGGGTAGAGCAATCAGG +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESPWAGS*VGRAIR
Trigger: CCTGATTGCTCTACCCACCCAAGACCCCGCCCACGG...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGCCGTGGGCGGGGTCTTaGGTGGGTAGAGCAATCAGG +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEPWAGS*VGRAIR
Trigger: CCTGATTGCTCTACCCACCCAAGACCCCGCCCACGG...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGGCTTCCTCAGCCCGATaGAGGGGGCCGAGGAGAGTA +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEASSAR*RGPRRV
Trigger: TACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGC...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTGTATGGGGAGCATCGTaGCTCACGCTGCGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGVWGAS*LTLRGP
Trigger: CGGCCCCCGCAGCGTGAGCCACGATGCTCCCCATAC...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTGGACTCCACATTTCTTaGGGGGTCCCCAGGAGACGG +
Preference number: 4 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFGLHIS*GVPRRR
Trigger: CCGTCTCCTGGGGACCCCCCAAGAAATGTGGAGTCC...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGAAGCAACCTGGTCGATaGGCAGACCTGGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: QVPPGTPTPARQNITLGGKQPGR*ADLAAL
Trigger: GAGAGCTGCCAGGTCTGCCCATCGACCAGGTTGCTT...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGGGGCCCAAGCAACCTaGTCGATGGGCAGACCTGGC +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAEGAQAT*SMGRPG
Trigger: GCCAGGTCTGCCCATCGACCAGGTTGCTTGGGCCCC...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGAGCTGGGGGCACAAGTaGGGGCGAGGTAAACCTCCC +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGESWGHK*GRGKPP
Trigger: GGGAGGTTTACCTCGCCCCCACTTGTGCCCCCAGCT...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCAGCTGGGGGCACAAGTaGGGGCGAGGTAAACCTCCC +
Preference number: 4 (lower is better)
Translates to: SATAISNVAKLLPHSGWASWGHK*GRGKPP
Trigger: GGGAGGTTTACCTCGCCCCCACTTGTGCCCCCAGCT...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGCGACTGAGGCGGACTaGCATGGACGACCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAATEAD*HGRPPG
Trigger: CCCCGGGGGTCGTCCATGCCAGTCCGCCTCAGTCGC...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTTGCCTCGAAGCGTTTTaGATCTCAGGCCAATGTGGG +
Preference number: 4 (lower is better)
Translates to: SNRQTSHTPRISARPPRTCLEAF*ISGQCG
Trigger: CCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCA...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGGAATATAACACTGGGTaGGTGGGTGTCCTGACGAAT +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGEYNTG*VGVLTN
Trigger: ATTCGTCAGGACACCCACCCACCCAGTGTTATATTC...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGACACGGGCCGCAAGGTaGACCGAGGCGGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRTRAAR*TEAAGT
Trigger: TGTGCCTGCCGCCTCGGTCCACCTTGCGGCCCGTGT...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGTTGGTGTCGCGAAGCTaGAGGCTGCGTCCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRLVSRS*RLRPRA
Trigger: CGCCCGCGGACGCAGCCTCCAGCTTCGCGACACCAA...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381389.5
CDS-3UTR CCA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCGCGCCCAGCTCGGTTTaGGCCGACGGAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: QVIWGASKRFGSQANVGSAPSSV*ADGALC
Trigger: GCAGAGGGCTCCGTCGGCCCAAACCGAGCTGGGCGC...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGGGGCTGTCTTCGGGCTaGGGCGGGCCAGATGTTGTA +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEGLSSG*GGPDVV
Trigger: TACAACATCTGGCCCGCCCCAGCCCGAAGACAGCCC...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCAACGCCCAGTCCGTTaGAAGACCCGGGGACAATGC +
Preference number: 4 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFQRPVR*KTRGQC
Trigger: GCATTGTCCCCGGGTCTTCCAACGGACTGGGCGTTG...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR TCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGACGTTTGGCCTCCCTaGACGCCTCGAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAEDVWPP*TPRAPW
Trigger: CCAAGGAGCTCGAGGCGTTCAGGGAGGCCAAACGTC...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR TCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTGCAATCAGGGGACGGTaGCGTTTGGCCTCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESAIRGR*RLASLN
Trigger: GTTCAGGGAGGCCAAACGTCACCGTCCCCTGATTGC...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR TCA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACAAGTCCAGGCCAATTTaGCTCAAAGTCCAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: TARLPTLPASVHGPRGLHKSRPI*LKVQGR
Trigger: TCTCCCTTGGACTTTGAGTCAAATTGGCCTGGACTT...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTAAGTCCAGGCCAATTTaGCTCAAAGTCCAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPKSRPI*LKVQGR
Trigger: TCTCCCTTGGACTTTGAGTCAAATTGGCCTGGACTT...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGATGTAAGATTTGGGGGTaGGGGTCGTGCCAATTACAT +
Preference number: 4 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRCKIWG*GSCQLH
Trigger: ATGTAATTGGCACGACCCTCACCCCCAAATCTTACA...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTGGCGGCAGGCACAGGTaGCATTCAGTGTTTGGCGTG +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGGGRHR*HSVFGV
Trigger: CACGCCAAACACTGAATGTCACCTGTGCCTGCCGCC...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTTTAAAGGAGTTGAGTTaGGTCAAACACGGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPLKELS*VKHGPQ
Trigger: TTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAA...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGGGCGGTAAGCAGCAATaGAGCACGAGGCGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEGGKQQ*STRRRP
Trigger: TGGCCTTCGCCTCGTGCTGCATTGCTGCTTACCGCC...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTGGCGGTAAGCAGCAATaGAGCACGAGGCGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGGGKQQ*STRRRP
Trigger: TGGCCTTCGCCTCGTGCTGCATTGCTGCTTACCGCC...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGCAACGATGCCACGGCTaGGACGGCTCACACGGCTTG +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAEQRCHG*DGSHGL
Trigger: CAAGCCGTGTGAGCCGTCGCAGCCGTGGCATCGTTG...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCACTCCTCAACGATaGCACGGCTGCGACGGCTCA +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESSTPQR*HGCDGS
Trigger: TGAGCCGTCGCAGCCGTGGCATCGTTGAGGAGTGCT...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGAGCACTCCTCAACGATaGCACGGCTGCGACGGCTCA +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGESTPQR*HGCDGS
Trigger: TGAGCCGTCGCAGCCGTGGCATCGTTGAGGAGTGCT...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGATGGTGGCGCCGGGCTaGAGACTTGCGGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEMVAPG*RLAAVL
Trigger: CAAAACTGCCGCAAGTCTGCAGCCCGGCGCCACCAT...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTATGGTGGCGCCGGGCTaGAGACTTGCGGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGMVAPG*RLAAVL
Trigger: CAAAACTGCCGCAAGTCTGCAGCCCGGCGCCACCAT...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCTGGTCAGGAGGAGGCTaGAGGATGGTGGCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: QVIWGASKRFGSQANVGSWSGGG*RMVAPG
Trigger: GCCCGGCGCCACCATCCTGCAGCCTCCTCCTGACCA...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCGCGGTAGCAGCGACGTaGCCACCTGTGATTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SATAISNVAKLLPHSGWAAVAAT*PPVISG
Trigger: CCCAGAAATCACAGGTGGGCACGTCGCTGCTACCGC...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp CCACGACTAGGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCGCCAGTCTGGGTTGTTaGTATTTTCGGATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: PRLGTEVRQAARARMVSGASLGC*YFRMAS
Trigger: ACTGGCCATCCGAAAATAGCAACAACCCAGACTGGC...GCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCCTAGTCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGCGGGTGTATCCCAAATaGCGCCGGCCGCACACTCAG +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAERVYPK*RRPHTQ
Trigger: CTGAGTGTGCGGCCGGCGGCATTTGGGATACACCCG...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGACCTGGCAGCTCTCCTaGTCTGTGGGCTCAGACCCG +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAETWQLS*SVGSDP
Trigger: CGGGTCTGAGCCCACAGAGCAGGAGAGCTGCCAGGT...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGCGCCGCGGTGGTGGCTaGTATGGCATCACCAGACCC +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRRRGGG*YGITRP
Trigger: GGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCG...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGGGCTGGTCGGCAAGTaGCCCCGGGAACACCCACTC +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAGLVGK*PREHPL
Trigger: GAGTGGGTGTTCCCGGGGGCACTTGCCGACCAGCCC...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGGGCCCAGGGGAGAGCTaGAAACCTGGGGACGCAAGG +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRGPGES*KPGDAR
Trigger: CCTTGCGTCCCCAGGTTTGCAGCTCTCCCCTGGGCC...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGACGGCTCACACGGCTTaGGGGCCTGCCTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAETAHTA*GPAWKS
Trigger: AGACTTCCAGGCAGGCCCGCAAGCCGTGTGAGCCGT...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381392.5
ENST00000381406.8
CDS-3UTR CCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGCAGCAGAAGGCTCGCTaGGGCAGGAGGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRQQKAR*GRRRRR
Trigger: CCTCCTCCTCCTCCTGCCCCAGCGAGCCTTCTGCTG...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381392.5
ENST00000381395.5
ENST00000418738.2
CDS-3UTR CCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTCGCACAGGGTCTCACTaGGGCGGTAAGCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGRTGSH*GGKQQC
Trigger: GCATTGCTGCTTACCGCCCCAGTGAGACCCTGTGCG...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTTCCCCACAGACGAACTaGAGGGTGTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESSPQTN*RVSTSS
Trigger: GGAGCTGGTGGACACCCTCCAGTTCGTCTGTGGGGA...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTTGCGCAGGCGCTGGGTaGACTGCTTCCAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGCAGAG*TASRCH
Trigger: ATGACACCTGGAAGCAGTCCACCCAGCGCCTGCGCA...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCCCCCTGCGCAGGCGCTaGGTGGACTGCTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAPLRRR*VDCFQV
Trigger: CACCTGGAAGCAGTCCACCCAGCGCCTGCGCAGGGG...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGACGCCTCGAGCTCCTTaGCGAGCACGTGACCCCGGC +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQETPRAP*RARDPG
Trigger: GCCGGGGTCACGTGCTCGCCAAGGAGCTCGAGGCGT...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCGAGGCTGCAGGATGGTaGCGCCGGGCTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: GRGTERFSGWNLMETSVVEAAGW*RRAADL
Trigger: CAAGTCTGCAGCCCGGCGCCACCATCCTGCAGCCTC...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGTATGGGGAGCATCGTaGCTCACGCTGCGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAVWGAS*LTLRGP
Trigger: CGGCCCCCGCAGCGTGAGCCACGATGCTCCCCATAC...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGTGTATCGGGAATGGGTaGGGTATGGGGAGCATCGTG +
Preference number: 4 (lower is better)
Translates to: QVPPGTPTPARQNITLGGCIGNG*GMGSIV
Trigger: CACGATGCTCCCCATACCCCACCCATTCCCGATACA...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCGCCCTCAGGACTTCTaGGGACCAGCCACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGRPQDF*GPATVP
Trigger: GGGGACAGTGGCTGGTCCCCAGAAGTCCTGAGGGCG...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GTTTACCCTGAAAATTCCCGTGAGAAGGGAGATGGCGGTAGCAGCGACGTGCCCAGCTCTCCTGCTCTGTaGGCTCAGACCCGCCTGACC +
Preference number: 4 (lower is better)
Translates to: VYPENSREKGDGGSSDVPSSPAL*AQTRLT
Trigger: GGTCAGGCGGGTCTGAGCCCACAGAGCAGGAGAGCT...GGGCACGTCGCTGCTACCGCCATCTCCCTTCTCACGGGAATTTTCAGGGTAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGGGGGCCCAAGCAACCTaGTCGATGGGCAGACCTGGC +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRGAQAT*SMGRPG
Trigger: GCCAGGTCTGCCCATCGACCAGGTTGCTTGGGCCCC...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGCCCGGGCCAGGATaGTTAGTGGCCCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGQPGPG*LVAQGR
Trigger: TCTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTG...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCCAGCCCGGGCCAGGATaGTTAGTGGCCCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GRGTERFSGWNLMETSVVQPGPG*LVAQGR
Trigger: TCTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTG...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGCGATCGAACGCTCTGTaGCAGGCGGTGGACGCTGCT +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAERSNAL*QAVDAA
Trigger: AGCAGCGTCCACCGCCTGCCACAGAGCGTTCGATCG...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381389.5
ENST00000434045.6
CDS-3UTR CCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGATTCCCATTGGTGTCTaGAAGCCGGCGACGCTGCCG +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEIPIGV*KPATLP
Trigger: CGGCAGCGTCGCCGGCTTCCAGACACCAATGGGAAT...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCATCGACTTCCCCATTaGGATTCCCATTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SNRQTSHTPRISARPPRTHRLPH*DSHWCL
Trigger: CAGACACCAATGGGAATCCCAATGGGGAAGTCGATG...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGGACGTTTGGCCTCCCTaGACGCCTCGAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRDVWPP*TPRAPW
Trigger: CCAAGGAGCTCGAGGCGTTCAGGGAGGCCAAACGTC...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR TCA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCGACGTTTGGCCTCCCTaGACGCCTCGAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GRGTERFSGWNLMETSVVDVWPP*TPRAPW
Trigger: CCAAGGAGCTCGAGGCGTTCAGGGAGGCCAAACGTC...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR TCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGCAATCAGGGGACGGTaGCGTTTGGCCTCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAEAIRGR*RLASLN
Trigger: GTTCAGGGAGGCCAAACGTCACCGTCCCCTGATTGC...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR TCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGCCTCTGACTGCTCTGTaGTTTTTAGTGATGGAAAAG +
Preference number: 4 (lower is better)
Translates to: GTEVRQAARARMVSGPGEPLTAL*FLVMEK
Trigger: CTTTTCCATCACTAAAAATCACAGAGCAGTCAGAGG...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGTGCTGTCAATCCTCCTaGCTTTTCCATCCAAAATCT +
Preference number: 4 (lower is better)
Translates to: SSARWRGPRRVACFGEAGCCQSS*LFHPKS
Trigger: AGATTTTGGATGGAAAAGTCAGGAGGATTGACAGCA...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTTTCTCCACTCCCCTCTaGCTTCTCCAAGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGFSTPL*LLQGGS
Trigger: TGAGCCCCCTTGGAGAAGTCAGAGGGGAGTGGAGAA...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTTGGGTTCCACAATTGTaGCAATTTGGCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: SNRQTSHTPRISARPPRTWVPQL*QFGSLG
Trigger: GCCCAAAGAGCCAAATTGTCACAATTGTGGAACCCA...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCAAAGGTATCGGGAAATaGGGTCAGCTGTTGTATCAA +
Preference number: 4 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPKGIGK*GQLLYQ
Trigger: TTGATACAACAGCTGACCTCATTTCCCGATACCTTT...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTACGGCTCACACGGCTTaGGGGCCTGCTGAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESTAHTA*GPAEVE
Trigger: TTCTACTTCAGCAGGCCCGCAAGCCGTGTGAGCCGT...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381389.5
ENST00000381395.5
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCACGGCTCACACGGCTTaGGGGCCTGCTGAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: SATAISNVAKLLPHSGWATAHTA*GPAEVE
Trigger: TTCTACTTCAGCAGGCCCGCAAGCCGTGTGAGCCGT...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381395.5
ENST00000416167.7
CDS-3UTR GCA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCCAACGATGCCACGGCTaGGACGGCTCACACGGCTTG +
Preference number: 4 (lower is better)
Translates to: GRGTERFSGWNLMETSVVQRCHG*DGSHGL
Trigger: CAAGCCGTGTGAGCCGTCGCAGCCGTGGCATCGTTG...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTAGGCGCTGGGTGGACTaGTTCCAGGTGTCATATTGG +
Preference number: 4 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFRRWVD*FQVSYW
Trigger: CCAATATGACACCTGGAAGCAGTCCACCCAGCGCCT...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTGCCGGGCTGCAGACTTaGGGCAGTTTTGCTCACTTC +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGAGLQT*GSFAHF
Trigger: GAAGTGAGCAAAACTGCCGCAAGTCTGCAGCCCGGC...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTGCCGGGCTGCAGACTTaGGGCAGTTTTGCTCACTTC +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESAGLQT*GSFAHF
Trigger: GAAGTGAGCAAAACTGCCGCAAGTCTGCAGCCCGGC...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp GTTTACCCTGAAAATTCCCGTGAGAAGGGAGATGGCGGTAGCAGCGACGTGCCCGCGGTAGCAGCGACGTaGCCACCTGTGATTTCTGGG +
Preference number: 4 (lower is better)
Translates to: VYPENSREKGDGGSSDVPAVAAT*PPVISG
Trigger: CCCAGAAATCACAGGTGGGCACGTCGCTGCTACCGC...GGGCACGTCGCTGCTACCGCCATCTCCCTTCTCACGGGAATTTTCAGGGTAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGCACTCCCCGCATCAGTaGACGGCCCCCGAGGACTCC +
Preference number: 4 (lower is better)
Translates to: ISVKGVELSQTRAARWTEHSPHQ*TAPEDS
Trigger: GGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTG...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCACCTGGCAGCTCTCCTaGTCTGTGGGCTCAGACCCG +
Preference number: 4 (lower is better)
Translates to: GRGTERFSGWNLMETSVVTWQLS*SVGSDP
Trigger: CGGGTCTGAGCCCACAGAGCAGGAGAGCTGCCAGGT...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGGCCCAGGGGAGAGCTaGAAACCTGGGGACGCAAGG +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAGPGES*KPGDAR
Trigger: CCTTGCGTCCCCAGGTTTGCAGCTCTCCCCTGGGCC...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGTGCCGCCCACCTCCCTaGTGCGTGTCGCAAACCGAA +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRCRPPP*CVSQTE
Trigger: TTCGGTTTGCGACACGCAGCAGGGAGGTGGGCGGCA...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCCAGCAGAAGGCTCGCTaGGGCAGGAGGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAQQKAR*GRRRRR
Trigger: CCTCCTCCTCCTCCTGCCCCAGCGAGCCTTCTGCTG...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381392.5
ENST00000381395.5
ENST00000418738.2
CDS-3UTR CCA 90 bp CCACGACTAGGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCATTGGGATTCCCATTaGTGTCTACAGCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PRLGTEVRQAARARMVSGHWDSH*CLQLSR
Trigger: TCTGCTGAGCTGTAGACACCAATGGGAATCCCAATG...GCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCCTAGTCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381395.5
CDS-3UTR CCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGTCCCCACAGACGAACTaGAGGGTGTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAESPQTN*RVSTSS
Trigger: GGAGCTGGTGGACACCCTCCAGTTCGTCTGTGGGGA...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTTGCCCACGGGGTATCTaGGGAAGTTGTCCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGCPRGI*GSCPEA
Trigger: TGCTTCCGGACAACTTCCCCAGATACCCCGTGGGCA...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp GTTTACCCTGAAAATTCCCGTGAGAAGGGAGATGGCGGTAGCAGCGACGTGCCCTGCGCAGGCGCTGGGTaGACTGCTTCCAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: VYPENSREKGDGGSSDVPCAGAG*TASRCH
Trigger: ATGACACCTGGAAGCAGTCCACCCAGCGCCTGCGCA...GGGCACGTCGCTGCTACCGCCATCTCCCTTCTCACGGGAATTTTCAGGGTAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGTGCGCAGGCGCTGGGTaGACTGCTTCCAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAECAGAG*TASRCH
Trigger: ATGACACCTGGAAGCAGTCCACCCAGCGCCTGCGCA...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGCCCCTGCGCAGGCGCTaGGTGGACTGCTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: ISVKGVELSQTRAARWTEPLRRR*VDCFQV
Trigger: CACCTGGAAGCAGTCCACCCAGCGCCTGCGCAGGGG...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGACGCCTCGAGCTCCTTaGCGAGCACGTGACCCCGGC +
Preference number: 4 (lower is better)
Translates to: ISVKGVELSQTRAARWTETPRAP*RARDPG
Trigger: GCCGGGGTCACGTGCTCGCCAAGGAGCTCGAGGCGT...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGGGGCGGGGTCTTGGGTaGGTAGAGCAATCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRGRGLG*VEQSGD
Trigger: GTCCCCTGATTGCTCTACCCACCCAAGACCCCGCCC...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCGGGCGGGGTCTTGGGTaGGTAGAGCAATCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: GRGTERFSGWNLMETSVVGRGLG*VEQSGD
Trigger: GTCCCCTGATTGCTCTACCCACCCAAGACCCCGCCC...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGCCGTGGGCGGGGTCTTaGGTGGGTAGAGCAATCAGG +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRPWAGS*VGRAIR
Trigger: CCTGATTGCTCTACCCACCCAAGACCCCGCCCACGG...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGCCGTGGGCGGGGTCTTaGGTGGGTAGAGCAATCAGG +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRPWAGS*VGRAIR
Trigger: CCTGATTGCTCTACCCACCCAAGACCCCGCCCACGG...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTaGCGCCGGGCTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQEEAAGW*RRAADL
Trigger: CAAGTCTGCAGCCCGGCGCCACCATCCTGCAGCCTC...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGGCTTCCTCAGCCCGATaGAGGGGGCCGAGGAGAGTA +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRASSAR*RGPRRV
Trigger: TACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGC...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCTTCTTTTCTCTTTGCTaGTTCAGGGACTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPFFSLC*FRDSSP
Trigger: TGGACTTGAGTCCCTGAACCAGCAAAGAGAAAAGAA...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGTTCTTTTCTCTTTGCTaGTTCAGGGACTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: GTEVRQAARARMVSGPGEFFSLC*FRDSSP
Trigger: TGGACTTGAGTCCCTGAACCAGCAAAGAGAAAAGAA...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCATCTTAGCGGGACTTTaGCCTGATCCATACAGATAT +
Preference number: 4 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPILAGL*PDPYRY
Trigger: ATATCTGTATGGATCAGGCCAAAGTCCCGCTAAGAT...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGGACTCCACATTTCTTaGGGGGTCCCCAGGAGACGG +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAEGLHIS*GVPRRR
Trigger: CCGTCTCCTGGGGACCCCCCAAGAAATGTGGAGTCC...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTTGGTGGTCTCCAGGCTaGCTTCGTGCGTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFWWSPG*LRAFLL
Trigger: AAGCAAGAACGCACGAAGCCAGCCTGGAGACCACCA...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCCGCCCTCAGGACTTCTaGGGACCAGCCACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGARPQDF*GPATVP
Trigger: GGGGACAGTGGCTGGTCCCCAGAAGTCCTGAGGGCG...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAAGCAACCTGGTCGATaGGCAGACCTGGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESKQPGR*ADLAAL
Trigger: GAGAGCTGCCAGGTCTGCCCATCGACCAGGTTGCTT...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCCGGTGGTGGCTGCTATaGCATCACCAGACCCGTGGG +
Preference number: 4 (lower is better)
Translates to: GRGTERFSGWNLMETSVVRWWLL*HHQTRG
Trigger: CCCACGGGTCTGGTGATGCCATAGCAGCCACCACCG...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGACAATTGTGACAATTTaGCTCTTTGGGCTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: GTEVRQAARARMVSGPGETIVTI*LFGLLS
Trigger: GGACAGAAGCCCAAAGAGCCAAATTGTCACAATTGT...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTGAATATAACACTGGGTaGGTGGGTGTCCTGACGAAT +
Preference number: 4 (lower is better)
Translates to: SNRQTSHTPRISARPPRTEYNTG*VGVLTN
Trigger: ATTCGTCAGGACACCCACCCACCCAGTGTTATATTC...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGGGGGAGGAGACAAGATaGAGAGCCACGACTAGGCAC +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEGEETR*RATTRH
Trigger: GTGCCTAGTCGTGGCTCTCCATCTTGTCTCCTCCCC...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCCTTTTAATGCTTTATTaGGATTGCAAGCGTTACAAG +
Preference number: 4 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPLLMLY*DCKRYK
Trigger: CTTGTAACGCTTGCAATCCCAATAAAGCATTAAAAG...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGCTCTGTGGCAGGCGGTaGACGCTGCTGAAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRLCGRR*TLLKVS
Trigger: GCTCACCTTCAGCAGCGTCCACCGCCTGCCACAGAG...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381389.5
ENST00000434045.6
CDS-3UTR CCA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCATTGGGATTCCCATTaGTGTCGCGAAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFHWDSH*CREAGG
Trigger: GCCTCCAGCTTCGCGACACCAATGGGAATCCCAATG...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381389.5
CDS-3UTR CCA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCCCATTGGTGTCTGCATaGCCGAGCTCACCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: GRGTERFSGWNLMETSVVPLVSA*PSSPGC
Trigger: GCACCCCGGTGAGCTCGGCCATGCAGACACCAATGG...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR TCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTCGAAGGCCAAGAAGGTaGGAAGCACCAGCATCGACT +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGRRPRR*EAPAST
Trigger: AGTCGATGCTGGTGCTTCTCACCTTCTTGGCCTTCG...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR TCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGGCAATCAGGGGACGGTaGCGTTTGGCCTCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRAIRGR*RLASLN
Trigger: GTTCAGGGAGGCCAAACGTCACCGTCCCCTGATTGC...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR TCA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACGGGATGCATAAAGTATaGGTGCTTTTTAGGATGGGA +
Preference number: 4 (lower is better)
Translates to: TARLPTLPASVHGPRGLHGMHKV*VLFRMG
Trigger: TCCCATCCTAAAAAGCACTCATACTTTATGCATCCC...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACTGCTGTCAATCCTCCTaGCTTTTCCATCCAAAATCT +
Preference number: 4 (lower is better)
Translates to: TARLPTLPASVHGPRGLHCCQSS*LFHPKS
Trigger: AGATTTTGGATGGAAAAGTCAGGAGGATTGACAGCA...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGCAACGATGCCACGGCTaGGACGGCTCACACGGCTTG +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQEQRCHG*DGSHGL
Trigger: CAAGCCGTGTGAGCCGTCGCAGCCGTGGCATCGTTG...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGCACTCCTCAACGATaGCACGGCTGCGACGGCTCA +
Preference number: 4 (lower is better)
Translates to: GRGTERFSGWNLMETSVVSTPQR*HGCDGS
Trigger: TGAGCCGTCGCAGCCGTGGCATCGTTGAGGAGTGCT...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGAGGCGCTGGGTGGACTaGTTCCAGGTGTCATATTGG +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGERRWVD*FQVSYW
Trigger: CCAATATGACACCTGGAAGCAGTCCACCCAGCGCCT...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTAGGCGCTGGGTGGACTaGTTCCAGGTGTCATATTGG +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGRRWVD*FQVSYW
Trigger: CCAATATGACACCTGGAAGCAGTCCACCCAGCGCCT...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp GTTTACCCTGAAAATTCCCGTGAGAAGGGAGATGGCGGTAGCAGCGACGTGCCCGCCGGGCTGCAGACTTaGGGCAGTTTTGCTCACTTC +
Preference number: 4 (lower is better)
Translates to: VYPENSREKGDGGSSDVPAGLQT*GSFAHF
Trigger: GAAGTGAGCAAAACTGCCGCAAGTCTGCAGCCCGGC...GGGCACGTCGCTGCTACCGCCATCTCCCTTCTCACGGGAATTTTCAGGGTAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTATGGTGGCGCCGGGCTaGAGACTTGCGGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGMVAPG*RLAAVL
Trigger: CAAAACTGCCGCAAGTCTGCAGCCCGGCGCCACCAT...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGATGGTGGCGCCGGGCTaGAGACTTGCGGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRMVAPG*RLAAVL
Trigger: CAAAACTGCCGCAAGTCTGCAGCCCGGCGCCACCAT...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp GTTTACCCTGAAAATTCCCGTGAGAAGGGAGATGGCGGTAGCAGCGACGTGCCCGTGTGTGCAGGTGGGTaGTTGCGTGTGCAACGTGTG +
Preference number: 4 (lower is better)
Translates to: VYPENSREKGDGGSSDVPVCAGG*LRVQRV
Trigger: CACACGTTGCACACGCAAGCACCCACCTGCACACAC...GGGCACGTCGCTGCTACCGCCATCTCCCTTCTCACGGGAATTTTCAGGGTAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGCGGGTGTATCCCAAATaGCGCCGGCCGCACACTCAG +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQERVYPK*RRPHTQ
Trigger: CTGAGTGTGCGGCCGGCGGCATTTGGGATACACCCG...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCAGGGTTCCTCAAGTGTaGGGAAGGCGGCCACCCTGC +
Preference number: 4 (lower is better)
Translates to: QVIWGASKRFGSQANVGSRVPQV*GRRPPC
Trigger: GCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCT...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGCGCACAGGGTCTCACTaGGGCGGTAAGCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRRTGSH*GGKQQC
Trigger: GCATTGCTGCTTACCGCCCCAGTGAGACCCTGTGCG...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCGCACAGGGTCTCACTaGGGCGGTAAGCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGRTGSH*GGKQQC
Trigger: GCATTGCTGCTTACCGCCCCAGTGAGACCCTGTGCG...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGCGCACAGGGTCTCACTaGGGCGGTAAGCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRRTGSH*GGKQQC
Trigger: GCATTGCTGCTTACCGCCCCAGTGAGACCCTGTGCG...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGTGCCCACGGGGTATCTaGGGAAGTTGTCCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAECPRGI*GSCPEA
Trigger: TGCTTCCGGACAACTTCCCCAGATACCCCGTGGGCA...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCTGCGCAGGCGCTGGGTaGACTGCTTCCAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: GRGTERFSGWNLMETSVVCAGAG*TASRCH
Trigger: ATGACACCTGGAAGCAGTCCACCCAGCGCCTGCGCA...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGTGCGCAGGCGCTGGGTaGACTGCTTCCAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRCAGAG*TASRCH
Trigger: ATGACACCTGGAAGCAGTCCACCCAGCGCCTGCGCA...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCCCGTGGGCGGGGTCTTaGGTGGGTAGAGCAATCAGG +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAPWAGS*VGRAIR
Trigger: CCTGATTGCTCTACCCACCCAAGACCCCGCCCACGG...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGCTTCCTCAGCCCGATaGAGGGGGCCGAGGAGAGTA +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAASSAR*RGPRRV
Trigger: TACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGC...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCGTTGCTATTTTCGGATaGCCAGTTTACCCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPVAIFG*PVYPEN
Trigger: ATTTTCAGGGTAAACTGGCCATCCGAAAATAGCAAC...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCTCCTTTGGTCTTACTaGGTCCCTCTGACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFLLWSY*VPLTAL
Trigger: CAGAGCAGTCAGAGGGACCCAGTAAGACCAAAGGAG...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACATCTTAGCGGGACTTTaGCCTGATCCATACAGATAT +
Preference number: 4 (lower is better)
Translates to: TARLPTLPASVHGPRGLHILAGL*PDPYRY
Trigger: ATATCTGTATGGATCAGGCCAAAGTCCCGCTAAGAT...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTTGGTGGTCTCCAGGCTaGCTTCGTGCGTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGWWSPG*LRAFLL
Trigger: AAGCAAGAACGCACGAAGCCAGCCTGGAGACCACCA...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCAGCTCTCCTGCTCTGTaGGCTCAGACCCGCCTGACC +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGASSPAL*AQTRLT
Trigger: GGTCAGGCGGGTCTGAGCCCACAGAGCAGGAGAGCT...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGGCATCACCAGACCCGTaGGCTCCGGGGCCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: ISVKGVELSQTRAARWTEASPDP*APGPKQ
Trigger: TTGCTTGGGCCCCGGAGCCCACGGGTCTGGTGATGC...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCAGCTGGGGGCACAAGTaGGGGCGAGGTAAACCTCCC +
Preference number: 4 (lower is better)
Translates to: QVIWGASKRFGSQANVGSSWGHK*GRGKPP
Trigger: GGGAGGTTTACCTCGCCCCCACTTGTGCCCCCAGCT...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CCACGACTAGGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCGACAATTTGGCTCTTTaGGCTTCTGTCCAATGTTCC +
Preference number: 4 (lower is better)
Translates to: PRLGTEVRQAARARMVSGDNLAL*ASVQCS
Trigger: GGAACATTGGACAGAAGCCCAAAGAGCCAAATTGTC...GCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCCTAGTCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGGGGTGTCCTGACGAATaGGCAGGTAATTTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEGCPDE*AGNLGC
Trigger: GCACCCCAAATTACCTGCCCATTCGTCAGGACACCC...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCGGAGAGCTGCAAACCTaGGGACGCAAGGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: QVIWGASKRFGSQANVGSGELQT*GRKGLV
Trigger: GACCAGCCCCTTGCGTCCCCAGGTTTGCAGCTCTCC...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGAAATTTGGGGGAGACTaGGGGCAATGCCCGGTCGCT +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAEKFGGD*GQCPVA
Trigger: AGCGACCGGGCATTGCCCCCAGTCTCCCCCAAATTT...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR TCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTTTTCGGGATGGAACCTaGTGGAAACGTCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGFRDGT*WKRPWS
Trigger: TGACCACGGACGTTTCCATCAGGTTCCATCCCGAAA...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR TCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGTGTAAGATTTGGGGGTaGGGGTCGTGCCAATTACAT +
Preference number: 4 (lower is better)
Translates to: QVPPGTPTPARQNITLGGCKIWG*GSCQLH
Trigger: ATGTAATTGGCACGACCCTCACCCCCAAATCTTACA...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCTTCTCCACTCCCCTCTaGCTTCTCCAAGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: GRGTERFSGWNLMETSVVFSTPL*LLQGGS
Trigger: TGAGCCCCCTTGGAGAAGTCAGAGGGGAGTGGAGAA...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGGCGGTAAGCAGCAATaGAGCACGAGGCGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAGGKQQ*STRRRP
Trigger: TGGCCTTCGCCTCGTGCTGCATTGCTGCTTACCGCC...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGGCGGTAAGCAGCAATaGAGCACGAGGCGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQEGGKQQ*STRRRP
Trigger: TGGCCTTCGCCTCGTGCTGCATTGCTGCTTACCGCC...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGACGGCTCACACGGCTTaGGGGCCTGCTGAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRTAHTA*GPAEVE
Trigger: TTCTACTTCAGCAGGCCCGCAAGCCGTGTGAGCCGT...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381389.5
ENST00000381395.5
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGACGGCTCACACGGCTTaGGGGCCTGCTGAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRTAHTA*GPAEVE
Trigger: TTCTACTTCAGCAGGCCCGCAAGCCGTGTGAGCCGT...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381389.5
ENST00000381395.5
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGCAACGATGCCACGGCTaGGACGGCTCACACGGCTTG +
Preference number: 4 (lower is better)
Translates to: ISVKGVELSQTRAARWTEQRCHG*DGSHGL
Trigger: CAAGCCGTGTGAGCCGTCGCAGCCGTGGCATCGTTG...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCAGCACTCCTCAACGATaGCACGGCTGCGACGGCTCA +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGASTPQR*HGCDGS
Trigger: TGAGCCGTCGCAGCCGTGGCATCGTTGAGGAGTGCT...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGGACTTGCGGCAGTTTTaGTCACTTCCGATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEDLRQF*SLPIAG
Trigger: GCCAGCAATCGGAAGTGAGCAAAACTGCCGCAAGTC...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGGCCGGGCTGCAGACTTaGGGCAGTTTTGCTCACTTC +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRAGLQT*GSFAHF
Trigger: GAAGTGAGCAAAACTGCCGCAAGTCTGCAGCCCGGC...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCTTGAAGATGCTGCTGTaGTTCCTCAGCCCGATGGAG +
Preference number: 4 (lower is better)
Translates to: SATAISNVAKLLPHSGWALKMLL*FLSPME
Trigger: CTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAA...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTTTGAAGATGCTGCTGTaGTTCCTCAGCCCGATGGAG +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESLKMLL*FLSPME
Trigger: CTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAA...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTTGTTCATGTGTGCTGTaGATGCGTGTGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFCSCVL*MRVCCV
Trigger: CACACAGCACACACGCATGCACAGCACACATGAACA...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATCACTCACAGGGCGCTTaGCGAGGGACCCTCTGCGAC +
Preference number: 4 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNHSQGA*RGTLCD
Trigger: GTCGCAGAGGGTCCCTCGGCAAGCGCCCTGTGAGTG...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGCGCCCACCTCCCTGCTaGGTGTCGCAAACCGAACAG +
Preference number: 4 (lower is better)
Translates to: ISVKGVELSQTRAARWTERPPPC*VSQTEQ
Trigger: CTGTTCGGTTTGCGACACGCAGCAGGGAGGTGGGCG...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTTTCCCAAATCCGAGTTaGTCTGGGGACTTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFFPNPS*SGDFVG
Trigger: TCCTACGAAGTCCCCAGAGCAACTCGGATTTGGGAA...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR GCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTTCAGTGCGTTGGACTTaGATAGACGCGAGTTCGGTC +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGSVRWT*IDASSV
Trigger: GACCGAACTCGCGTCTATGCAAGTCCAACGCACTGA...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR CCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCCGCACAGGGTCTCACTaGGGCGGTAAGCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGARTGSH*GGKQQC
Trigger: GCATTGCTGCTTACCGCCCCAGTGAGACCCTGTGCG...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCCGCACAGGGTCTCACTaGGGCGGTAAGCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: QVIWGASKRFGSQANVGSRTGSH*GGKQQC
Trigger: GCATTGCTGCTTACCGCCCCAGTGAGACCCTGTGCG...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCTCCCCACAGACGAACTaGAGGGTGTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGASPQTN*RVSTSS
Trigger: GGAGCTGGTGGACACCCTCCAGTTCGTCTGTGGGGA...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGTCCCCACAGACGAACTaGAGGGTGTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQESPQTN*RVSTSS
Trigger: GGAGCTGGTGGACACCCTCCAGTTCGTCTGTGGGGA...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCTGCCCACGGGGTATCTaGGGAAGTTGTCCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GRGTERFSGWNLMETSVVCPRGI*GSCPEA
Trigger: TGCTTCCGGACAACTTCCCCAGATACCCCGTGGGCA...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTTTCCAGGTGTCATATTaGAAGAACTTGCCCACGGGG +
Preference number: 4 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFFQVSY*KNLPTG
Trigger: CCCCGTGGGCAAGTTCTTCCAATATGACACCTGGAA...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCTGCGCAGGCGCTGGGTaGACTGCTTCCAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGACAGAG*TASRCH
Trigger: ATGACACCTGGAAGCAGTCCACCCAGCGCCTGCGCA...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCCTCCTTTGGTCTTACTaGGTCCCTCTGACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SATAISNVAKLLPHSGWALLWSY*VPLTAL
Trigger: CAGAGCAGTCAGAGGGACCCAGTAAGACCAAAGGAG...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGGAATGGGTGGGGTATaGGGAGCATCGTGGCTCACG +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQEGMGGV*GASWLT
Trigger: CGTGAGCCACGATGCTCCCCATACCCCACCCATTCC...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTCCGCCATCTCCAATGTaGCCAAACTCCTTCCTCACT +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESPPSPM*PNSFLT
Trigger: AGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGG...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGGACTCCACATTTCTTaGGGGGTCCCCAGGAGACGG +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQEGLHIS*GVPRRR
Trigger: CCGTCTCCTGGGGACCCCCCAAGAAATGTGGAGTCC...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GTTTACCCTGAAAATTCCCGTGAGAAGGGAGATGGCGGTAGCAGCGACGTGCCCTGGTGGTCTCCAGGCTaGCTTCGTGCGTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: VYPENSREKGDGGSSDVPWWSPG*LRAFLL
Trigger: AAGCAAGAACGCACGAAGCCAGCCTGGAGACCACCA...GGGCACGTCGCTGCTACCGCCATCTCCCTTCTCACGGGAATTTTCAGGGTAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATGGGGGCAGGACGTGGTaGTCTCCAGGCTGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNGGRTW*SPGWLR
Trigger: ACGAAGCCAGCCTGGAGACCACCACGTCCTGCCCCC...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGAGCCAGGCCGGACAGTaGCCTTCTCCACTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: ISVKGVELSQTRAARWTESQAGQ*PSPLPS
Trigger: AGAGGGGAGTGGAGAAGGCCACTGTCCGGCCTGGCT...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAAGCAACCTGGTCGATaGGCAGACCTGGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: GRGTERFSGWNLMETSVVKQPGR*ADLAAL
Trigger: GAGAGCTGCCAGGTCTGCCCATCGACCAGGTTGCTT...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGTCCAATGTTCCGAATaGCCCACTCACAGGGCGCTT +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAEVQCSE*PTHRAL
Trigger: AAGCGCCCTGTGAGTGGGCCATTCGGAACATTGGAC...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGGGTGTCCTGACGAATaGGCAGGTAATTTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAEGCPDE*AGNLGC
Trigger: GCACCCCAAATTACCTGCCCATTCGTCAGGACACCC...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCGGGGAGGAGACAAGATaGAGAGCCACGACTAGGCAC +
Preference number: 4 (lower is better)
Translates to: GRGTERFSGWNLMETSVVGEETR*RATTRH
Trigger: GTGCCTAGTCGTGGCTCTCCATCTTGTCTCCTCCCC...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTGACAAAACCCAAGCATaGGATTTTGCCGGAAATATT +
Preference number: 4 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPDKTQA*DFAGNI
Trigger: AATATTTCCGGCAAAATCCCATGCTTGGGTTTTGTC...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTGACAATGCCCAAATTTaGGGGAGACTGGGGGCAATG +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESDNAQI*GRLGAM
Trigger: CATTGCCCCCAGTCTCCCCCAAATTTGGGCATTGTC...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR CCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTCATTGGGATTCCCATTaGTGTCTGCATGGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESHWDSH*CLHGRA
Trigger: AGCTCGGCCATGCAGACACCAATGGGAATCCCAATG...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434045.6
3UTR CAA 72 bp TGGGTGGGTGGGTGTCCTGACGAATGGGCAGGTAATTaGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: WVGGCPDEWAGN*GCLEAFWISGQ
Trigger: TTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTGCCCATTCGTCAGGACACCCACCCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCGAAGGCCAAGAAGGTaGGAAGCACCAGCATCGACT +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGRRPRR*EAPAST
Trigger: AGTCGATGCTGGTGCTTCTCACCTTCTTGGCCTTCG...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR TCA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCCGAAGGCCAAGAAGGTaGGAAGCACCAGCATCGACT +
Preference number: 4 (lower is better)
Translates to: GRGTERFSGWNLMETSVVRRPRR*EAPAST
Trigger: AGTCGATGCTGGTGCTTCTCACCTTCTTGGCCTTCG...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR TCA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTTGGGTTCCACAATTGTaGCAATTTGGCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFWVPQL*QFGSLG
Trigger: GCCCAAAGAGCCAAATTGTCACAATTGTGGAACCCA...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTCATATTGGAAGAACTTaGCCACGGGGTATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESHIGRT*PRGIWG
Trigger: TCCCCAGATACCCCGTGGGCAAGTTCTTCCAATATG...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGCGCTGGGTGGACTaGTTCCAGGTGTCATATTGG +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRRRWVD*FQVSYW
Trigger: CCAATATGACACCTGGAAGCAGTCCACCCAGCGCCT...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGACTTGCGGCAGTTTTaGTCACTTCCGATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAEDLRQF*SLPIAG
Trigger: GCCAGCAATCGGAAGTGAGCAAAACTGCCGCAAGTC...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp GTTTACCCTGAAAATTCCCGTGAGAAGGGAGATGGCGGTAGCAGCGACGTGCCCGACTTGCGGCAGTTTTaGTCACTTCCGATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: VYPENSREKGDGGSSDVPDLRQF*SLPIAG
Trigger: GCCAGCAATCGGAAGTGAGCAAAACTGCCGCAAGTC...GGGCACGTCGCTGCTACCGCCATCTCCCTTCTCACGGGAATTTTCAGGGTAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGCCGGGCTGCAGACTTaGGGCAGTTTTGCTCACTTC +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAAGLQT*GSFAHF
Trigger: GAAGTGAGCAAAACTGCCGCAAGTCTGCAGCCCGGC...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGTGCATAAAGTATGAGTaGTTTTTAGGATGGGAATTG +
Preference number: 4 (lower is better)
Translates to: GTEVRQAARARMVSGPGECIKYE*FLGWEL
Trigger: CAATTCCCATCCTAAAAAGCACTCATACTTTATGCA...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCTGCATAAAGTATGAGTaGTTTTTAGGATGGGAATTG +
Preference number: 4 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPCIKYE*FLGWEL
Trigger: CAATTCCCATCCTAAAAAGCACTCATACTTTATGCA...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGGCAGGTAATTTGGGGTaGCTCGAAGCGTTTTGGATC +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEAGNLG*LEAFWI
Trigger: GATCCAAAACGCTTCGAGGCACCCCAAATTACCTGC...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATTGCCGCCCACCTCCCTaGTGCGTGTCGCAAACCGAA +
Preference number: 4 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNCRPPP*CVSQTE
Trigger: TTCGGTTTGCGACACGCAGCAGGGAGGTGGGCGGCA...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCATTGGGATTCCCATTaGTGTCTACAGCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFHWDSH*CLQLSR
Trigger: TCTGCTGAGCTGTAGACACCAATGGGAATCCCAATG...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381392.5
ENST00000381395.5
CDS-3UTR CCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCTGCCCACGGGGTATCTaGGGAAGTTGTCCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGACPRGI*GSCPEA
Trigger: TGCTTCCGGACAACTTCCCCAGATACCCCGTGGGCA...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGTGCCCACGGGGTATCTaGGGAAGTTGTCCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQECPRGI*GSCPEA
Trigger: TGCTTCCGGACAACTTCCCCAGATACCCCGTGGGCA...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTTTCCAGGTGTCATATTaGAAGAACTTGCCCACGGGG +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGFQVSY*KNLPTG
Trigger: CCCCGTGGGCAAGTTCTTCCAATATGACACCTGGAA...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATGGGCGGGGTCTTGGGTaGGTAGAGCAATCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNGRGLG*VEQSGD
Trigger: GTCCCCTGATTGCTCTACCCACCCAAGACCCCGCCC...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGAAGGTGTATCGGGAATaGGTGGGGTATGGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAEKVYRE*VGYGEH
Trigger: ATGCTCCCCATACCCCACCCATTCCCGATACACCTT...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTCATCGACTTCCCCATTaGGATTCCCATTGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESHRLPH*DSHWCS
Trigger: GCTACACCAATGGGAATCCCAATGGGGAAGTCGATG...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418738.2
CDS-3UTR CCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTGATAATTTGGGGGTCTaGGGAAACCATCTCCGCGAA +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESDNLGV*GNHLRE
Trigger: TTCGCGGAGATGGTTTCCCCAGACCCCCAAATTATC...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR CCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGCCGTCCTCAGTGCGTTaGACTTGCATAGACGCGAGT +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRPSSVR*TCIDAS
Trigger: ACTCGCGTCTATGCAAGTCCAACGCACTGAGGACGG...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR TCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGTTTCGGGATGGAACCTaGTGGAAACGTCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRFRDGT*WKRPWS
Trigger: TGACCACGGACGTTTCCATCAGGTTCCATCCCGAAA...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR TCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGTTTCGGGATGGAACCTaGTGGAAACGTCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRFRDGT*WKRPWS
Trigger: TGACCACGGACGTTTCCATCAGGTTCCATCCCGAAA...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR TCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTTTTCGGGATGGAACCTaGTGGAAACGTCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGFRDGT*WKRPWS
Trigger: TGACCACGGACGTTTCCATCAGGTTCCATCCCGAAA...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR TCA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCCGACGTGCCCACCTGTaGTTTCTGGGGTCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: QVIWGASKRFGSQANVGSRRAHL*FLGSFF
Trigger: AAAGAAGGACCCCAGAAATCACAGGTGGGCACGTCG...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGCGTGTTTGTGTGCTGTaGGCTGTGTTCATGTATGTG +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGERVCVL*AVFMYV
Trigger: CACATACATGAACACAGCTCACAGCACACAAACACG...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCCGTGTTTGTGTGCTGTaGGCTGTGTTCATGTATGTG +
Preference number: 4 (lower is better)
Translates to: SATAISNVAKLLPHSGWARVCVL*AVFMYV
Trigger: CACATACATGAACACAGCTCACAGCACACAAACACG...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTTTAAAGGAGTTGAGTTaGGTCAAACACGGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESLKELS*VKHGPQ
Trigger: TTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAA...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCAGGCGCTGGGTGGACTaGTTCCAGGTGTCATATTGG +
Preference number: 4 (lower is better)
Translates to: QVIWGASKRFGSQANVGSRRWVD*FQVSYW
Trigger: CCAATATGACACCTGGAAGCAGTCCACCCAGCGCCT...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGAGGCGCTGGGTGGACTaGTTCCAGGTGTCATATTGG +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQERRWVD*FQVSYW
Trigger: CCAATATGACACCTGGAAGCAGTCCACCCAGCGCCT...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGGACTTGCGGCAGTTTTaGTCACTTCCGATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRDLRQF*SLPIAG
Trigger: GCCAGCAATCGGAAGTGAGCAAAACTGCCGCAAGTC...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGGCCGGGCTGCAGACTTaGGGCAGTTTTGCTCACTTC +
Preference number: 4 (lower is better)
Translates to: ISVKGVELSQTRAARWTEAGLQT*GSFAHF
Trigger: GAAGTGAGCAAAACTGCCGCAAGTCTGCAGCCCGGC...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGTTGAAGATGCTGCTGTaGTTCCTCAGCCCGATGGAG +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRLKMLL*FLSPME
Trigger: CTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAA...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTTTGAAGATGCTGCTGTaGTTCCTCAGCCCGATGGAG +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGLKMLL*FLSPME
Trigger: CTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAA...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCTTGAAGATGCTGCTGTaGTTCCTCAGCCCGATGGAG +
Preference number: 4 (lower is better)
Translates to: GRGTERFSGWNLMETSVVLKMLL*FLSPME
Trigger: CTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAA...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATGCGGTAGCAGCGACGTaGCCACCTGTGATTTCTGGG +
Preference number: 4 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNAVAAT*PPVISG
Trigger: CCCAGAAATCACAGGTGGGCACGTCGCTGCTACCGC...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTTGCATAAAGTATGAGTaGTTTTTAGGATGGGAATTG +
Preference number: 4 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPCIKYE*FLGWEL
Trigger: CAATTCCCATCCTAAAAAGCACTCATACTTTATGCA...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGGTGCAACGTGTGTGCTaGGTGTTTGTGTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRVQRVC*VFVCCE
Trigger: CTCACAGCACACAAACACGCAGCACACACGTTGCAC...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTAAGACCCGGGGACAATaGCCAAATTTGGGGGAGACT +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGKTRGQ*PNLGET
Trigger: AGTCTCCCCCAAATTTGGGCATTGTCCCCGGGTCTT...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR CCA 90 bp GTTTACCCTGAAAATTCCCGTGAGAAGGGAGATGGCGGTAGCAGCGACGTGCCCTTCCAGGTGTCATATTaGAAGAACTTGCCCACGGGG +
Preference number: 4 (lower is better)
Translates to: VYPENSREKGDGGSSDVPFQVSY*KNLPTG
Trigger: CCCCGTGGGCAAGTTCTTCCAATATGACACCTGGAA...GGGCACGTCGCTGCTACCGCCATCTCCCTTCTCACGGGAATTTTCAGGGTAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAATGGGCAGGTAATTTaGGGTGCCTCGAAGCGTTTT +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESNGQVI*GASKRF
Trigger: AAAACGCTTCGAGGCACCCCAAATTACCTGCCCATT...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTCTTTTAATGCTTTATTaGGATTGCAAGCGTTACAAG +
Preference number: 4 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPLLMLY*DCKRYK
Trigger: CTTGTAACGCTTGCAATCCCAATAAAGCATTAAAAG...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGGCCACCACGATAATTTaGGGGTCTGGGGAAACCATC +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRATTII*GSGETI
Trigger: GATGGTTTCCCCAGACCCCCAAATTATCGTGGTGGC...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR TCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGTTTCGGGATGGAACCTaGTGGAAACGTCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQEFRDGT*WKRPWS
Trigger: TGACCACGGACGTTTCCATCAGGTTCCATCCCGAAA...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR TCA 90 bp GTTTACCCTGAAAATTCCCGTGAGAAGGGAGATGGCGGTAGCAGCGACGTGCCCGCGGGGCTCAGACCATaGAAACATTGGAGAATCTTA +
Preference number: 4 (lower is better)
Translates to: VYPENSREKGDGGSSDVPAGLRP*KHWRIL
Trigger: TAAGATTCTCCAATGTTTTCATGGTCTGAGCCCCGC...GGGCACGTCGCTGCTACCGCCATCTCCCTTCTCACGGGAATTTTCAGGGTAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGTGGGTTCCACAATTGTaGCAATTTGGCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAEWVPQL*QFGSLG
Trigger: GCCCAAAGAGCCAAATTGTCACAATTGTGGAACCCA...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGCATATTGGAAGAACTTaGCCACGGGGTATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRHIGRT*PRGIWG
Trigger: TCCCCAGATACCCCGTGGGCAAGTTCTTCCAATATG...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCATATTGGAAGAACTTaGCCACGGGGTATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGHIGRT*PRGIWG
Trigger: TCCCCAGATACCCCGTGGGCAAGTTCTTCCAATATG...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGTTGAAGATGCTGCTGTaGTTCCTCAGCCCGATGGAG +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQELKMLL*FLSPME
Trigger: CTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAA...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGGCCAGTCTGGGTTGTTaGTATTTTCGGATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRASLGC*YFRMAS
Trigger: ACTGGCCATCCGAAAATAGCAACAACCCAGACTGGC...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp GTTTACCCTGAAAATTCCCGTGAGAAGGGAGATGGCGGTAGCAGCGACGTGCCCCTGTGTTCATGCGTGTaGTGTGTGTTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: VYPENSREKGDGGSSDVPLCSCV*CVLCVC
Trigger: ACACACACACAACACACAGCACACGCATGAACACAG...GGGCACGTCGCTGCTACCGCCATCTCCCTTCTCACGGGAATTTTCAGGGTAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGTGTTCATGTGTGCTGTaGATGCGTGTGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRCSCVL*MRVCCV
Trigger: CACACAGCACACACGCATGCACAGCACACATGAACA...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATGTGTGTGCAGGTGGGTaGTTGCGTGTGCAACGTGTG +
Preference number: 4 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNVCAGG*LRVQRV
Trigger: CACACGTTGCACACGCAAGCACCCACCTGCACACAC...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTGCAGGTAATTTGGGGTaGCTCGAAGCGTTTTGGATC +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGAGNLG*LEAFWI
Trigger: GATCCAAAACGCTTCGAGGCACCCCAAATTACCTGC...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGGGCTGGTCGGCAAGTaGCCCCGGGAACACCCACTC +
Preference number: 4 (lower is better)
Translates to: WDFAGNISVKGVELSQTRGLVGK*PREHPL
Trigger: GAGTGGGTGTTCCCGGGGGCACTTGCCGACCAGCCC...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTTTCCAGGTGTCATATTaGAAGAACTTGCCCACGGGG +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGFQVSY*KNLPTG
Trigger: CCCCGTGGGCAAGTTCTTCCAATATGACACCTGGAA...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGAGTGAGGAGCCAGTCTaGGTTGTTGCTATTTTCGGA +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAESEEPV*VVAIFG
Trigger: TCCGAAAATAGCAACAACCCAGACTGGCTCCTCACT...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGCTCCTTTGGTCTTACTaGGTCCCTCTGACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQELLWSY*VPLTAL
Trigger: CAGAGCAGTCAGAGGGACCCAGTAAGACCAAAGGAG...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GTTTACCCTGAAAATTCCCGTGAGAAGGGAGATGGCGGTAGCAGCGACGTGCCCTTTCATCCAATTTTGTaGGGGTGTGCGTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: VYPENSREKGDGGSSDVPFHPIL*GCACVC
Trigger: GCACACACACGCACACCCCCACAAAATTGGATGAAA...GGGCACGTCGCTGCTACCGCCATCTCCCTTCTCACGGGAATTTTCAGGGTAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTGCATCTCTGTCATGGTaGAAAGATGGAATTAGGCCT +
Preference number: 4 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESASLSW*KDGIRP
Trigger: AGGCCTAATTCCATCTTTCCACCATGACAGAGATGC...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGGCATCTCTGTCATGGTaGAAAGATGGAATTAGGCCT +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEASLSW*KDGIRP
Trigger: AGGCCTAATTCCATCTTTCCACCATGACAGAGATGC...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGGTCCAATGTTCCGAATaGCCCACTCACAGGGCGCTT +
Preference number: 4 (lower is better)
Translates to: ISVKGVELSQTRAARWTEVQCSE*PTHRAL
Trigger: AAGCGCCCTGTGAGTGGGCCATTCGGAACATTGGAC...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCTGCCTCGAAGCGTTTTaGATCTCAGGCCAATGTGGG +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGACLEAF*ISGQCG
Trigger: CCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCA...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGATTCAGTGTTTGGCGTaGGGGTCTTCAGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQEIQCLA*GSSGDG
Trigger: GCCATCACCTGAAGACCCCCACGCCAAACACTGAAT...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGTGACATTCAGTGTTTaGCGTGGGGGTCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQEVTFSV*RGGLQV
Trigger: CACCTGAAGACCCCCACGCCAAACACTGAATGTCAC...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGACACGGGCCGCAAGGTaGACCGAGGCGGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: WDFAGNISVKGVELSQTRTRAAR*TEAAGT
Trigger: TGTGCCTGCCGCCTCGGTCCACCTTGCGGCCCGTGT...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGGACAAAACCCAAGCATaGGATTTTGCCGGAAATATT +
Preference number: 4 (lower is better)
Translates to: QVPPGTPTPARQNITLGGDKTQA*DFAGNI
Trigger: AATATTTCCGGCAAAATCCCATGCTTGGGTTTTGTC...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCCATCGACTTCCCCATTaGGATTCCCATTGGTGTCGC +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAHRLPH*DSHWCR
Trigger: GCGACACCAATGGGAATCCCAATGGGGAAGTCGATG...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381389.5
CDS-3UTR CCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGTAATTAATCCACTTTaGTTCGGCGAAGGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAEVINPL*FGEGER
Trigger: CCTCTCGCCTTCGCCGAACCAAAGTGGATTAATTAC...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGCATCGACTTCCCCATTaGGATTCCCATTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRHRLPH*DSHWCL
Trigger: CAGACACCAATGGGAATCCCAATGGGGAAGTCGATG...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381406.8
ENST00000416167.7
ENST00000434045.6
CDS-3UTR TCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGCGTGTTTGTGTGCTGTaGGCTGTGTTCATGTATGTG +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRRVCVL*AVFMYV
Trigger: CACATACATGAACACAGCTCACAGCACACAAACACG...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGCATATTGGAAGAACTTaGCCACGGGGTATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQEHIGRT*PRGIWG
Trigger: TCCCCAGATACCCCGTGGGCAAGTTCTTCCAATATG...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR GCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGCTGTGTTCATGCGTGTaGTGTGTGTTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRLCSCV*CVLCVC
Trigger: ACACACACACAACACACAGCACACGCATGAACACAG...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGCATCGACTTCCCCATTaGGATTCCCATTGGTGTCTA +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRHRLPH*DSHWCL
Trigger: TAGACACCAATGGGAATCCCAATGGGGAAGTCGATG...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381392.5
ENST00000381395.5
CDS-3UTR CCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTGAGAGATTTTCGGGATaGAACCTGATGGAAACGTCC +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGERFSG*NLMETS
Trigger: GGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTC...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGGAGAGATTTTCGGGATaGAACCTGATGGAAACGTCC +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRERFSG*NLMETS
Trigger: GGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTC...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGATTTCTGAGCTTTTGTaGGGTGTTTCTAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QVPPGTPTPARQNITLGGISELL*GVSKKP
Trigger: TGGCTTTTTAGAAACACCCCACAAAAGCTCAGAAAT...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGTGAGGAGCCAGTCTaGGTTGTTGCTATTTTCGGA +
Preference number: 4 (lower is better)
Translates to: GRGTERFSGWNLMETSVVSEEPV*VVAIFG
Trigger: TCCGAAAATAGCAACAACCCAGACTGGCTCCTCACT...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGCGCCCTCAGGACTTCTaGGGACCAGCCACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: WDFAGNISVKGVELSQTRRPQDF*GPATVP
Trigger: GGGGACAGTGGCTGGTCCCCAGAAGTCCTGAGGGCG...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTACAATTGTGACAATTTaGCTCTTTGGGCTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGTIVTI*LFGLLS
Trigger: GGACAGAAGCCCAAAGAGCCAAATTGTCACAATTGT...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAATGGGCAGGTAATTTaGGGTGCCTCGAAGCGTTTT +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRNGQVI*GASKRF
Trigger: AAAACGCTTCGAGGCACCCCAAATTACCTGCCCATT...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTAATGGGCAGGTAATTTaGGGTGCCTCGAAGCGTTTT +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGNGQVI*GASKRF
Trigger: AAAACGCTTCGAGGCACCCCAAATTACCTGCCCATT...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGATTCAGTGTTTGGCGTaGGGGTCTTCAGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: ISVKGVELSQTRAARWTEIQCLA*GSSGDG
Trigger: GCCATCACCTGAAGACCCCCACGCCAAACACTGAAT...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGGTGACATTCAGTGTTTaGCGTGGGGGTCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: ISVKGVELSQTRAARWTEVTFSV*RGGLQV
Trigger: CACCTGAAGACCCCCACGCCAAACACTGAATGTCAC...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCCATCGACTTCCCCATTaGGATTCCCATTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAHRLPH*DSHWCL
Trigger: CAGACACCAATGGGAATCCCAATGGGGAAGTCGATG...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381406.8
ENST00000416167.7
ENST00000434045.6
CDS-3UTR CCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCAAATCCGAGTTGCTCTaGGGACTTCGTAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAKSELL*GLRRRQ
Trigger: CTGTCTCCTACGAAGTCCCCAGAGCAACTCGGATTT...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR CCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCGACCCAAGTGTGTTTaGGCAACGCTAGAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGRPKCV*ATLERN
Trigger: ATTTCTCTCTAGCGTTGCCCAAACACACTTGGGTCG...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR TCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGACGTTTGGCCTCCCTaGACGCCTCGAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: WDFAGNISVKGVELSQTRDVWPP*TPRAPW
Trigger: CCAAGGAGCTCGAGGCGTTCAGGGAGGCCAAACGTC...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCTGTAAGATTTGGGGGTaGGGGTCGTGCCAATTACAT +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGACKIWG*GSCQLH
Trigger: ATGTAATTGGCACGACCCTCACCCCCAAATCTTACA...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp GTTTACCCTGAAAATTCCCGTGAGAAGGGAGATGGCGGTAGCAGCGACGTGCCCTGCTGTCAATCCTCCTaGCTTTTCCATCCAAAATCT +
Preference number: 4 (lower is better)
Translates to: VYPENSREKGDGGSSDVPCCQSS*LFHPKS
Trigger: AGATTTTGGATGGAAAAGTCAGGAGGATTGACAGCA...GGGCACGTCGCTGCTACCGCCATCTCCCTTCTCACGGGAATTTTCAGGGTAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGGTGTGCTCATCTGTGTaGTGTGTGTGCTGTGCGTTT +
Preference number: 4 (lower is better)
Translates to: ISVKGVELSQTRAARWTEVCSSV*CVCCAF
Trigger: AAACGCACAGCACACACAGCACACAGATGAGCACAC...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATGTGCAACGTGTGTGCTaGGTGTTTGTGTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNVQRVC*VFVCCE
Trigger: CTCACAGCACACAAACACGCAGCACACACGTTGCAC...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCGAGAGATTTTCGGGATaGAACCTGATGGAAACGTCC +
Preference number: 4 (lower is better)
Translates to: QVIWGASKRFGSQANVGSERFSG*NLMETS
Trigger: GGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTC...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGAGATTTTCGGGATaGAACCTGATGGAAACGTCC +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQEERFSG*NLMETS
Trigger: GGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTC...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CCA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGTTCTTTTCTCTTTGCTaGTTCAGGGACTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAEFFSLC*FRDSSP
Trigger: TGGACTTGAGTCCCTGAACCAGCAAAGAGAAAAGAA...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTGTTGCTATTTTCGGATaGCCAGTTTACCCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGVAIFG*PVYPEN
Trigger: ATTTTCAGGGTAAACTGGCCATCCGAAAATAGCAAC...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GTTTACCCTGAAAATTCCCGTGAGAAGGGAGATGGCGGTAGCAGCGACGTGCCCATCTTAGCGGGACTTTaGCCTGATCCATACAGATAT +
Preference number: 4 (lower is better)
Translates to: VYPENSREKGDGGSSDVPILAGL*PDPYRY
Trigger: ATATCTGTATGGATCAGGCCAAAGTCCCGCTAAGAT...GGGCACGTCGCTGCTACCGCCATCTCCCTTCTCACGGGAATTTTCAGGGTAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTGCATCTCTGTCATGGTaGAAAGATGGAATTAGGCCT +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGASLSW*KDGIRP
Trigger: AGGCCTAATTCCATCTTTCCACCATGACAGAGATGC...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGGCATCTCTGTCATaGTGGAAAGATGGAATTAGG +
Preference number: 4 (lower is better)
Translates to: GRGTERFSGWNLMETSVVRASLS*WKDGIR
Trigger: CCTAATTCCATCTTTCCACCATGACAGAGATGCCCT...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGGCATCTCTGTCATaGTGGAAAGATGGAATTAGG +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRRASLS*WKDGIR
Trigger: CCTAATTCCATCTTTCCACCATGACAGAGATGCCCT...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATAAGGTGTATCGGGAATaGGTGGGGTATGGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNKVYRE*VGYGEH
Trigger: ATGCTCCCCATACCCCACCCATTCCCGATACACCTT...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGGACAATTTGGCTCTTTaGGCTTCTGTCCAATGTTCC +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRDNLAL*ASVQCS
Trigger: GGAACATTGGACAGAAGCCCAAAGAGCCAAATTGTC...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAATATAACACTGGGTaGGTGGGTGTCCTGACGAAT +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQEEYNTG*VGVLTN
Trigger: ATTCGTCAGGACACCCACCCACCCAGTGTTATATTC...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCCCCACCCAAAATATCTaGATAATGGTTACCCCGTCC +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAPTQNI*IMVTPS
Trigger: GGACGGGGTAACCATTATCCAGATATTTTGGGTGGG...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000434045.6
3UTR CAA 72 bp GATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTaGAGTCAAACACGGGCCGCAAGGTGGACCGAGGCG +
Preference number: 4 (lower is better)
Translates to: DFAGNISVKGVE*SQTRAARWTEA
Trigger: CGCCTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGCCTCTGACTGCTCTGTaGTTTTTAGTGATGGAAAAG +
Preference number: 4 (lower is better)
Translates to: RGTERFSGWNLMETSVVRPLTAL*FLVMEK
Trigger: CTTTTCCATCACTAAAAATCACAGAGCAGTCAGAGG...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGTCGTGGGGGCATGTCTaGTCAGCTACCGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: WDFAGNISVKGVELSQTRSWGHV*SATAIS
Trigger: GGAGATGGCGGTAGCTGAGCAGACATGCCCCCACGA...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTATGCTTTATTGGGATTaGAAGCGTTACAAGGTTAAA +
Preference number: 4 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFMLYWD*KRYKVK
Trigger: TTTAACCTTGTAACGCTTGCAATCCCAATAAAGCAT...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATTTCCAGGTGTCATATTaGAAGAACTTGCCCACGGGG +
Preference number: 4 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNFQVSY*KNLPTG
Trigger: CCCCGTGGGCAAGTTCTTCCAATATGACACCTGGAA...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGATTTCTGAGCTTTTGTaGGGTGTTTCTAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEISELL*GVSKKP
Trigger: TGGCTTTTTAGAAACACCCCACAAAAGCTCAGAAAT...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000434045.6
CDS-3UTR CCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGAGTGAGGAGCCAGTCTaGGTTGTTGCTATTTTCGGA +
Preference number: 4 (lower is better)
Translates to: ISVKGVELSQTRAARWTESEEPV*VVAIFG
Trigger: TCCGAAAATAGCAACAACCCAGACTGGCTCCTCACT...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCAGGGCATCTCTGTCATaGTGGAAAGATGGAATTAGG +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGARASLS*WKDGIR
Trigger: CCTAATTCCATCTTTCCACCATGACAGAGATGCCCT...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCGACAATTTGGCTCTTTaGGCTTCTGTCCAATGTTCC +
Preference number: 4 (lower is better)
Translates to: QVIWGASKRFGSQANVGSDNLAL*ASVQCS
Trigger: GGAACATTGGACAGAAGCCCAAAGAGCCAAATTGTC...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCAAAGGTATCGGGAAATaGGGTCAGCTGTTGTATCAA +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAKGIGK*GQLLYQ
Trigger: TTGATACAACAGCTGACCTCATTTCCCGATACCTTT...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTATGCTTTATTGGGATTaGAAGCGTTACAAGGTTAAA +
Preference number: 4 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGMLYWD*KRYKVK
Trigger: TTTAACCTTGTAACGCTTGCAATCCCAATAAAGCAT...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCTTGCGGGCCTGCCTaGAAGTCTGAAGTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: WDFAGNISVKGVELSQTRACGPA*KSEVEA
Trigger: GGCTTCTACTTCAGACTTCCAGGCAGGCCCGCAAGC...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381406.8
CDS-3UTR TCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCTTTAAAGCCAATTTCTaGGCTTTTGTGGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAFKANF*AFVGCF
Trigger: GAAACACCCCACAAAAGCTCAGAAATTGGCTTTAAA...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000434045.6
CDS-3UTR CCA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTATTTCTGAGCTTTTGTaGGGTGTTTCTAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGISELL*GVSKKP
Trigger: TGGCTTTTTAGAAACACCCCACAAAAGCTCAGAAAT...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000434045.6
CDS-3UTR CCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGACAAAACCCAAGCATaGGATTTTGCCGGAAATATT +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQEDKTQA*DFAGNI
Trigger: AATATTTCCGGCAAAATCCCATGCTTGGGTTTTGTC...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGCATTGGGATTCCCATTaGTGTCTGGAAGCCGGCGAC +
Preference number: 4 (lower is better)
Translates to: WDFAGNISVKGVELSQTRHWDSH*CLEAGD
Trigger: GTCGCCGGCTTCCAGACACCAATGGGAATCCCAATG...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGTTTAAAGCCAATTTCTaGGCTTTTGTGGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: ISVKGVELSQTRAARWTEFKANF*AFVGCF
Trigger: GAAACACCCCACAAAAGCTCAGAAATTGGCTTTAAA...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGATGCTTTATTGGGATTaGAAGCGTTACAAGGTTAAA +
Preference number: 4 (lower is better)
Translates to: GTERFSGWNLMETSVVRRMLYWD*KRYKVK
Trigger: TTTAACCTTGTAACGCTTGCAATCCCAATAAAGCAT...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCATTTCTGAGCTTTTGTaGGGTGTTTCTAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAISELL*GVSKKP
Trigger: TGGCTTTTTAGAAACACCCCACAAAAGCTCAGAAAT...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000434045.6
CDS-3UTR CCA 90 bp ATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCCGCAAGGTGGACCGAGGTTGCTATTTTCGGATaGCCAGTTTACCCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: ISVKGVELSQTRAARWTEVAIFG*PVYPEN
Trigger: ATTTTCAGGGTAAACTGGCCATCCGAAAATAGCAAC...CTCGGTCCACCTTGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAACGCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CAA 72 bp TTAGTGATGGAAAAGGGAGTGAGGAGCCAGTCTGGGTaGTTGCTATTTTCGGATGGCCAGTTTACCCTGAAA +
Preference number: 4 (lower is better)
Translates to: LVMEKGVRSQSG*LLFSDGQFTLK
Trigger: TTTCAGGGTAAACTGGCCATCCGAAAATAGCAACAACCCAGACTGGCTCCTCACTCCCTTTTCCATCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
3UTR CAA 72 bp ATCTCAGGCCAATGTGGGTTCCACAATTGTGACAATTaGGCTCTTTGGGCTTCTGTCCAATGTTCCGAATGG +
Preference number: 4 (lower is better)
Translates to: ISGQCGFHNCDN*ALWASVQCSEW
Trigger: CCATTCGGAACATTGGACAGAAGCCCAAAGAGCCAAATTGTCACAATTGTGGAACCCACATTGGCCTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGTGTTCATGTGTGCTGTaGATGCGTGTGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: WDFAGNISVKGVELSQTRCSCVL*MRVCCV
Trigger: CACACAGCACACACGCATGCACAGCACACATGAACA...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGCTTTTAATGCTTTATTaGGATTGCAAGCGTTACAAG +
Preference number: 4 (lower is better)
Translates to: WNREIFGMEPDGNVRGQELLMLY*DCKRYK
Trigger: CTTGTAACGCTTGCAATCCCAATAAAGCATTAAAAG...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR TCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGCGGGGCTCAGACCATaGAAACATTGGAGAATCTTA +
Preference number: 4 (lower is better)
Translates to: WDFAGNISVKGVELSQTRAGLRP*KHWRIL
Trigger: TAAGATTCTCCAATGTTTTCATGGTCTGAGCCCCGC...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR GCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGCTGTGTTCATGCGTGTaGTGTGTGTTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: WDFAGNISVKGVELSQTRLCSCV*CVLCVC
Trigger: ACACACACACAACACACAGCACACGCATGAACACAG...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGTTTCATCCAATTTTGTaGGGGTGTGCGTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: WDFAGNISVKGVELSQTRFHPIL*GCACVC
Trigger: GCACACACACGCACACCCCCACAAAATTGGATGAAA...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CCA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGACAATTGTGACAATTTaGCTCTTTGGGCTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: WDFAGNISVKGVELSQTRTIVTI*LFGLLS
Trigger: GGACAGAAGCCCAAAGAGCCAAATTGTCACAATTGT...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS GCA 90 bp GGAGTCAGCAGCGAGGCAGCGGGCGGCGTCGACGCGGGGCCGCCTTaGCCGATGGAGGCGCTGGTGGGCAGAGCGCGGGCAGGCGTGGGC +
Preference number: 5 (lower is better)
Translates to: GVSSEAAGGVDAGPP*PMEALVGRARAGVG
Trigger: GCCCACGCCTGCCCGCGCTCTGCCCACCAGCGCCTCCATCGGGCAAGGCGGCCCCGCGTCGACGCCGCCCGCTGCCTCGCTGCTGACTCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416167.7
CDS CCA 90 bp GGCGGAGTGGAGGCTGCACCCGGACCGCGGGCGCCCAGCTCGGTTTaGGCCGACGGAGCCCTCTGCCGTCGCGAGCCCGGGCCTCGGGAG +
Preference number: 5 (lower is better)
Translates to: GGVEAAPGPRAPSSV*ADGALCRREPGPRE
Trigger: CTCCCGAGGCCCGGGCTCGCGACGGCAGAGGGCTCCGTCGGCCCAAACCGAGCTGGGCGCCCGCGGTCCGGGTGCAGCCTCCACTCCGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS CCA 90 bp CGGGCGTTGGCCCTCCTGCCGGACACTCCTCTGCCAGCGCCGCTCTaGCCGAGTCGCGGGGGCCGAATGTGCGACGGGGCAGAGCGGGGG +
Preference number: 5 (lower is better)
Translates to: RALALLPDTPLPAPL*PSRGGRMCDGAERG
Trigger: CCCCCGCTCTGCCCCGTCGCACATTCGGCCCCCGCGACTCGGCCAGAGCGGCGCTGGCAGAGGAGTGTCCGGCAGGAGGGCCAACGCCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCGGCGCCCAGCTCGGTTaGGGCCGACGGAGCCCTCTG +
Preference number: 5 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPGAQLG*GRRSPL
Trigger: CAGAGGGCTCCGTCGGCCCAAACCGAGCTGGGCGCC...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS GCA 90 bp CTCCCTGCTGCGTGTCGCAAACCGAACAGCGGGCGTTGGCCCTCCTaGCGGACACTCCTCTGCCAGCGCCGCTCTGGCCGAGTCGCGGGG +
Preference number: 5 (lower is better)
Translates to: LPAACRKPNSGRWPS*RTLLCQRRSGRVAG
Trigger: CCCCGCGACTCGGCCAGAGCGGCGCTGGCAGAGGAGTGTCCGGCAGGAGGGCCAACGCCCGCTGTTCGGTTTGCGACACGCAGCAGGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS CCA 90 bp CGCGGGCGCACCAGGAGCTCAGGCAGCGAGCGATCGAACGCTCTGTaGCAGGCGGTGGACGCTGCTGAAGGTGAGCGAGACCCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: RGRTRSSGSERSNAL*QAVDAAEGERDPGA
Trigger: GGCCCCGGGGTCTCGCTCACCTTCAGCAGCGTCCACCGCCTGCCACAGAGCGTTCGATCGCTCGCTGCCTGAGCTCCTGGTGCGCCCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381389.5
ENST00000434045.6
CDS CCA 90 bp GCCGCCCACCTCCCTGCTGCGTGTCGCAAACCGAACAGCGGGCGTTaGCCCTCCTGCCGGACACTCCTCTGCCAGCGCCGCTCTGGCCGA +
Preference number: 5 (lower is better)
Translates to: AAHLPAACRKPNSGR*PSCRTLLCQRRSGR
Trigger: TCGGCCAGAGCGGCGCTGGCAGAGGAGTGTCCGGCAGGAGGGCCAACGCCCGCTGTTCGGTTTGCGACACGCAGCAGGGAGGTGGGCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCCCACTCACAGGGCGCTaGCCGAGGGACCCTCTGCGA +
Preference number: 5 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPPLTGR*PRDPLR
Trigger: TCGCAGAGGGTCCCTCGGCAAGCGCCCTGTGAGTGG...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGCCACTCACAGGGCGCTaGCCGAGGGACCCTCTGCGA +
Preference number: 5 (lower is better)
Translates to: GTEVRQAARARMVSGPGEPLTGR*PRDPLR
Trigger: TCGCAGAGGGTCCCTCGGCAAGCGCCCTGTGAGTGG...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS GCA 90 bp TTCCCATTGGTGTCTGGAAGCCGGCGACGCTGCCGCCCACCTCCCTaGTGCGTGTCGCAAACCGAACAGCGGGCGTTGGCCCTCCTGCCG +
Preference number: 5 (lower is better)
Translates to: FPLVSGSRRRCRPPP*CVSQTEQRALALLP
Trigger: CGGCAGGAGGGCCAACGCCCGCTGTTCGGTTTGCGACACGCAGCAGGGAGGTGGGCGGCAGCGTCGCCGGCTTCCAGACACCAATGGGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCCTGTCCTCCCCTCCTTaGGTCTTACTGGGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPLSSPP*VLLGPS
Trigger: AGAGGGACCCAGTAAGACCAAAGGAGGGGAGGACAG...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS CCA 90 bp GGCGGGCACGCAGGAGGGCAGGCAGGCCCCTGCGCAGGCGCTGGGTaGACTGCTTCCAGGTGTCATATTGGAAGAACTTGCCCACGGGGT +
Preference number: 5 (lower is better)
Translates to: GGHAGGQAGPCAGAG*TASRCHIGRTCPRG
Trigger: ACCCCGTGGGCAAGTTCTTCCAATATGACACCTGGAAGCAGTCCACCCAGCGCCTGCGCAGGGGCCTGCCTGCCCTCCTGCGTGCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS CCA 90 bp CCAGGAGCTCAGGCAGCGAGCGATCGAACGCTCTGTGGCAGGCGGTaGACGCTGCTGAAGGTGAGCGAGACCCCGGGGCCAGTCCTCAGT +
Preference number: 5 (lower is better)
Translates to: PGAQAASDRTLCGRR*TLLKVSETPGPVLS
Trigger: ACTGAGGACTGGCCCCGGGGTCTCGCTCACCTTCAGCAGCGTCCACCGCCTGCCACAGAGCGTTCGATCGCTCGCTGCCTGAGCTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381389.5
ENST00000434045.6
CDS TCA 90 bp CTTGGGTGGGTAGAGCAATCAGGGGACGGTGACGTTTGGCCTCCCTaGACGCCTCGAGCTCCTTGGCGAGCACGTGACCCCGGCGGGCAC +
Preference number: 5 (lower is better)
Translates to: LGWVEQSGDGDVWPP*TPRAPWRARDPGGH
Trigger: GTGCCCGCCGGGGTCACGTGCTCGCCAAGGAGCTCGAGGCGTTCAGGGAGGCCAAACGTCACCGTCCCCTGATTGCTCTACCCACCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCAGACTTGCGGCAGTTTaGCTCACTTCCGATTGCTGG +
Preference number: 5 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPRLAAV*LTSDCW
Trigger: CCAGCAATCGGAAGTGAGCAAAACTGCCGCAAGTCT...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGCGCCGGGCTGCAGACTaGCGGCAGTTTTGCTCACTT +
Preference number: 5 (lower is better)
Translates to: SSARWRGPRRVACFGEAGRRAAD*RQFCSL
Trigger: AAGTGAGCAAAACTGCCGCAAGTCTGCAGCCCGGCG...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS CCA 90 bp CGAACTGGAGGGTGTCCACCAGCTCCCCGCCGCACAGGGTCTCACTaGGGCGGTAAGCAGCAATGCAGCACGAGGCGAAGGCCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: RTGGCPPAPRRTGSH*GGKQQCSTRRRPRR
Trigger: CCTTCTTGGCCTTCGCCTCGTGCTGCATTGCTGCTTACCGCCCCAGTGAGACCCTGTGCGGCGGGGAGCTGGTGGACACCCTCCAGTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTACGTCCCTCTCGGACTaGGCGGGGGTAGCACAGTAC +
Preference number: 5 (lower is better)
Translates to: SNRQTSHTPRISARPPRTTSLSD*AGVAQY
Trigger: GTACTGTGCTACCCCCGCCAAGTCCGAGAGGGACGT...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCCTGTCCTCCCCTCCTTaGGTCTTACTGGGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPLSSPP*VLLGPS
Trigger: AGAGGGACCCAGTAAGACCAAAGGAGGGGAGGACAG...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGACCGAACAGCGGGCGTaGGCCCTCCTGCCGGACACT +
Preference number: 5 (lower is better)
Translates to: QVPPGTPTPARQNITLGGTEQRA*ALLPDT
Trigger: AGTGTCCGGCAGGAGGGCCAACGCCCGCTGTTCGGT...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS GCA 90 bp GCACGCAGGAGGGCAGGCAGGCCCCTGCGCAGGCGCTGGGTGGACTaGTTCCAGGTGTCATATTGGAAGAACTTGCCCACGGGGTATCTG +
Preference number: 5 (lower is better)
Translates to: ARRRAGRPLRRRWVD*FQVSYWKNLPTGYL
Trigger: CAGATACCCCGTGGGCAAGTTCTTCCAATATGACACCTGGAAGCAGTCCACCCAGCGCCTGCGCAGGGGCCTGCCTGCCCTCCTGCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGAGCGTGTGCTGTGCGTTaGTGTGCTGTGTGCTCGTGT +
Preference number: 5 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRACAVR*CAVCSC
Trigger: ACACGAGCACACAGCACACAAACGCACAGCACACGC...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACGCGTGTGCTGTGCGTTaGTGTGCTGTGTGCTCGTGT +
Preference number: 5 (lower is better)
Translates to: TARLPTLPASVHGPRGLHACAVR*CAVCSC
Trigger: ACACGAGCACACAGCACACAAACGCACAGCACACGC...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACCCATTGGGATTCCCATaGGTGTCTGGAAGCCGGCGA +
Preference number: 5 (lower is better)
Translates to: TARLPTLPASVHGPRGLHPLGFP*VSGSRR
Trigger: TCGCCGGCTTCCAGACACCAATGGGAATCCCAATGG...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGTCATATTGGAAGAACTaGCCCACGGGGTATCTGGGG +
Preference number: 5 (lower is better)
Translates to: SSARWRGPRRVACFGEAGSYWKN*PTGYLG
Trigger: CCCCAGATACCCCGTGGGCAAGTTCTTCCAATATGA...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp GGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGTCATATTGGAAGAACTaGCCCACGGGGTATCTGGGG +
Preference number: 5 (lower is better)
Translates to: GTEVRQAARARMVSGPGESYWKN*PTGYLG
Trigger: CCCCAGATACCCCGTGGGCAAGTTCTTCCAATATGA...CTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCCTTCCAGGTGTCATATaGGAAGAACTTGCCCACGGG +
Preference number: 5 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPLPGVI*EELAHG
Trigger: CCCGTGGGCAAGTTCTTCCAATATGACACCTGGAAG...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGAGACTTGCGGCAGTTTaGCTCACTTCCGATTGCTGG +
Preference number: 5 (lower is better)
Translates to: SSARWRGPRRVACFGEAGRLAAV*LTSDCW
Trigger: CCAGCAATCGGAAGTGAGCAAAACTGCCGCAAGTCT...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCAGCCAGTCTGGGTTGTaGCTATTTTCGGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPSQSGL*LFSDGQ
Trigger: CTGGCCATCCGAAAATAGCAACAACCCAGACTGGCT...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCCACAATTGTGACAATTaGGCTCTTTGGGCTTCTGTC +
Preference number: 5 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPHNCDN*ALWASV
Trigger: GACAGAAGCCCAAAGAGCCAAATTGTCACAATTGTG...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp CCCGGCCTCACCCCACCTTGCCCCCAAGAGGTCCCACAGAGCTTCGGACCTCCTGGTGACATTCAGTGTTaGGCGTGGGGGTCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: PGLTPPCPQEVPQSFGPPGDIQC*AWGSSG
Trigger: ACCTGAAGACCCCCACGCCAAACACTGAATGTCACC...AGGAGGTCCGAAGCTCTGTGGGACCTCTTGGGGGCAAGGTGGGGTGAGGCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCCCCAAGCATGGGATTTaGCCGGAAATATTAGCGTTA +
Preference number: 5 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPPKHGI*PEILAL
Trigger: TAACGCTAATATTTCCGGCAAAATCCCATGCTTGGG...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTGACGGCTCACACGGCTaGCGGGCCTGCCTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESDGSHG*RACLEV
Trigger: GACTTCCAGGCAGGCCCGCAAGCCGTGTGAGCCGTC...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381392.5
ENST00000381406.8
CDS-3UTR CAA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCGACGGCTCACACGGCTaGCGGGCCTGCCTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: SATAISNVAKLLPHSGWADGSHG*RACLEV
Trigger: GACTTCCAGGCAGGCCCGCAAGCCGTGTGAGCCGTC...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381406.8
CDS-3UTR CAA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGACCGAACAGCGGGCGTaGGCCCTCCTGCCGGACACT +
Preference number: 5 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGETEQRA*ALLPDT
Trigger: AGTGTCCGGCAGGAGGGCCAACGCCCGCTGTTCGGT...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp CCACGACTAGGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCGGTGACATTCAGTGTTaGGCGTGGGGGTCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: PRLGTEVRQAARARMVSGGDIQC*AWGSSG
Trigger: ACCTGAAGACCCCCACGCCAAACACTGAATGTCACC...GCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCCTAGTCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp ACCGAGGGAGAGGGGAGGGTTCCTCAAGTGTGCGGAAGGCGGCCACCCTGCCCCGTTAAAGGAGTTGAGTaGAGTCAAACACGGGCCGCA +
Preference number: 5 (lower is better)
Translates to: TEGEGRVPQVCGRRPPCPVKGVE*SQTRAA
Trigger: TGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAAC...GGGGCAGGGTGGCCGCCTTCCGCACACTTGAGGAACCCTCCCCTCTCCCTCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS CCA 90 bp ATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATaGTGGCGCCGGGCTGCAGACTTGCGGCAGTTTTGCTCACTTCCG +
Preference number: 5 (lower is better)
Translates to: MEPDGNVRGQEEAAG*WRRAADLRQFCSLP
Trigger: CGGAAGTGAGCAAAACTGCCGCAAGTCTGCAGCCCGGCGCCACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp GGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACCCGTGGGCTCCGGGGCCCCCAATTTCTGAGCTTTaGTGGGGTGTTTCTAAAAAG +
Preference number: 5 (lower is better)
Translates to: GAAVVAAMASPDPWAPGPPISEL*WGVSKK
Trigger: CTTTTTAGAAACACCCCACAAAAGCTCAGAAATTGG...GGGCCCCGGAGCCCACGGGTCTGGTGATGCCATAGCAGCCACCACCGCGGCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp AGTCCCTGCCGCAGCCCTAGGCGCCGCGGTGGTGGCTGCTATGGCATCACCAGACAAGTCCAGGCCAATTaGACTCAAAGTCCAAGGGAG +
Preference number: 5 (lower is better)
Translates to: SPCRSPRRRGGGCYGITRQVQAN*TQSPRE
Trigger: CTCCCTTGGACTTTGAGTCAAATTGGCCTGGACTTG...TCTGGTGATGCCATAGCAGCCACCACCGCGGCGCCTAGGGCTGCGGCAGGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCCACTCACAGGGCGCTaGCCGAGGGACCCTCTGCGA +
Preference number: 5 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGPLTGR*PRDPLR
Trigger: TCGCAGAGGGTCCCTCGGCAAGCGCCCTGTGAGTGG...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACGTTAAAGGAGTTGAGTaGAGTCAAACACGGGCCGCA +
Preference number: 5 (lower is better)
Translates to: TARLPTLPASVHGPRGLHVKGVE*SQTRAA
Trigger: TGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAAC...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATCGACGCGGGGCCGCCTaGCCCGATGGAGGCGCTGGT +
Preference number: 5 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNRRGAA*PDGGAG
Trigger: ACCAGCGCCTCCATCGGGCAAGGCGGCCCCGCGTCG...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416167.7
CDS GCA 90 bp GCAGGCGCTGGGTGGACTGCTTCCAGGTGTCATATTGGAAGAACTTaGCCACGGGGTATCTGGGGAAGTTGTCCGGAAGCACGGTCGGAG +
Preference number: 5 (lower is better)
Translates to: AGAGWTASRCHIGRT*PRGIWGSCPEARSE
Trigger: CTCCGACCGTGCTTCCGGACAACTTCCCCAGATACCCCGTGGGCAAGTTCTTCCAATATGACACCTGGAAGCAGTCCACCCAGCGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTCGCCGGGCTGCAGACTaGCGGCAGTTTTGCTCACTT +
Preference number: 5 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGRRAAD*RQFCSL
Trigger: AAGTGAGCAAAACTGCCGCAAGTCTGCAGCCCGGCG...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACTGTTTTCATCCAATTTaGTGGGGGTGTGCGTGTGTG +
Preference number: 5 (lower is better)
Translates to: TARLPTLPASVHGPRGLHCFHPI*WGCACV
Trigger: CACACACGCACACCCCCACAAAATTGGATGAAAACA...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATGGCGCCCAGCTCGGTTaGGGCCGACGGAGCCCTCTG +
Preference number: 5 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNGAQLG*GRRSPL
Trigger: CAGAGGGCTCCGTCGGCCCAAACCGAGCTGGGCGCC...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGACGTCCCTCTCGGACTaGGCGGGGGTAGCACAGTAC +
Preference number: 5 (lower is better)
Translates to: RGTERFSGWNLMETSVVRTSLSD*AGVAQY
Trigger: GTACTGTGCTACCCCCGCCAAGTCCGAGAGGGACGT...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCACGTCCCTCTCGGACTaGGCGGGGGTAGCACAGTAC +
Preference number: 5 (lower is better)
Translates to: GRGTERFSGWNLMETSVVTSLSD*AGVAQY
Trigger: GTACTGTGCTACCCCCGCCAAGTCCGAGAGGGACGT...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGCTTCCAGGTGTCATATaGGAAGAACTTGCCCACGGG +
Preference number: 5 (lower is better)
Translates to: QVPPGTPTPARQNITLGGLPGVI*EELAHG
Trigger: CCCGTGGGCAAGTTCTTCCAATATGACACCTGGAAG...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp CAAGTGCCCCCGGGAACACCCACTCCGGCGAGGCAGAATATAACACTGGGTGGGAGGAGCCAGTCTGGGTaGTTGCTATTTTCGGATGGC +
Preference number: 5 (lower is better)
Translates to: QVPPGTPTPARQNITLGGRSQSG*LLFSDG
Trigger: GCCATCCGAAAATAGCAACAACCCAGACTGGCTCCT...CCCACCCAGTGTTATATTCTGCCTCGCCGGAGTGGGTGTTCCCGGGGGCACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTCTGTCCTCCCCTCCTTaGGTCTTACTGGGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGLSSPP*VLLGPS
Trigger: AGAGGGACCCAGTAAGACCAAAGGAGGGGAGGACAG...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTGCGTGTGCTGTGCGTTaGTGTGCTGTGTGCTCGTGT +
Preference number: 5 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESACAVR*CAVCSC
Trigger: ACACGAGCACACAGCACACAAACGCACAGCACACGC...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp GTTTACCCTGAAAATTCCCGTGAGAAGGGAGATGGCGGTAGCAGCGACGTGCCCTGTGCAGGTGGGTGCTaGCGTGTGCAACGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: VYPENSREKGDGGSSDVPCAGGC*RVQRVC
Trigger: GCACACACGTTGCACACGCAAGCACCCACCTGCACA...GGGCACGTCGCTGCTACCGCCATCTCCCTTCTCACGGGAATTTTCAGGGTAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTTGTTTTCATCCAATTTaGTGGGGGTGTGCGTGTGTG +
Preference number: 5 (lower is better)
Translates to: SNRQTSHTPRISARPPRTCFHPI*WGCACV
Trigger: CACACACGCACACCCCCACAAAATTGGATGAAAACA...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACCAGACCATGAAAACATaGGAGAATCTTAGCGGGACT +
Preference number: 5 (lower is better)
Translates to: TARLPTLPASVHGPRGLHQTMKT*ENLSGT
Trigger: AGTCCCGCTAAGATTCTCCAATGTTTTCATGGTCTG...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTCCATTGGGATTCCCATaGGTGTCGCGAAGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESPLGFP*VSRSWR
Trigger: CCTCCAGCTTCGCGACACCAATGGGAATCCCAATGG...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381389.5
CDS-3UTR CAA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCCCATTGGGATTCCCATaGGTGTCTGGAAGCCGGCGA +
Preference number: 5 (lower is better)
Translates to: SATAISNVAKLLPHSGWAPLGFP*VSGSRR
Trigger: TCGCCGGCTTCCAGACACCAATGGGAATCCCAATGG...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGGCAACGCCCAGTCCGTaGGAAGACCCGGGGACAATG +
Preference number: 5 (lower is better)
Translates to: GTERFSGWNLMETSVVRRATPSP*EDPGTM
Trigger: CATTGTCCCCGGGTCTTCCAACGGACTGGGCGTTGC...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR CAA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCTCAGTGCGTTGGACTaGCATAGACGCGAGTTCGGT +
Preference number: 5 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFLSALD*HRREFG
Trigger: ACCGAACTCGCGTCTATGCAAGTCCAACGCACTGAG...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR CAA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGACGTCCCTCTCGGACTaGGCGGGGGTAGCACAGTAC +
Preference number: 5 (lower is better)
Translates to: WNREIFGMEPDGNVRGQETSLSD*AGVAQY
Trigger: GTACTGTGCTACCCCCGCCAAGTCCGAGAGGGACGT...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCACGTCCCTCTCGGACTaGGCGGGGGTAGCACAGTAC +
Preference number: 5 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGATSLSD*AGVAQY
Trigger: GTACTGTGCTACCCCCGCCAAGTCCGAGAGGGACGT...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTTCATATTGGAAGAACTaGCCCACGGGGTATCTGGGG +
Preference number: 5 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFSYWKN*PTGYLG
Trigger: CCCCAGATACCCCGTGGGCAAGTTCTTCCAATATGA...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGCGCCGGGCTGCAGACTaGCGGCAGTTTTGCTCACTT +
Preference number: 5 (lower is better)
Translates to: RGTERFSGWNLMETSVVRRRAAD*RQFCSL
Trigger: AAGTGAGCAAAACTGCCGCAAGTCTGCAGCCCGGCG...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCCGCCGGGCTGCAGACTaGCGGCAGTTTTGCTCACTT +
Preference number: 5 (lower is better)
Translates to: GRGTERFSGWNLMETSVVRRAAD*RQFCSL
Trigger: AAGTGAGCAAAACTGCCGCAAGTCTGCAGCCCGGCG...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp ACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCACCGATTTTGTACATGTTaGAAGATGCTGCTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: TARLPTLPASVHGPRGLHRFCTC*KMLLCF
Trigger: GAAGCACAGCAGCATCTTCAAACATGTACAAAATCG...GTGGAGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGGTGCCTCGAAGCGTTTaGGATCTCAGGCCAATGTGG +
Preference number: 5 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEVPRSV*DLRPMW
Trigger: CCACATTGGCCTGAGATCCAAAACGCTTCGAGGCAC...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCCCAAGCATGGGATTTaGCCGGAAATATTAGCGTTA +
Preference number: 5 (lower is better)
Translates to: SNRQTSHTPRISARPPRTPKHGI*PEILAL
Trigger: TAACGCTAATATTTCCGGCAAAATCCCATGCTTGGG...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTGGACAATGCCCAAATTaGGGGGAGACTGGGGGCAAT +
Preference number: 5 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGGQCPN*GETGGN
Trigger: ATTGCCCCCAGTCTCCCCCAAATTTGGGCATTGTCC...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR CAA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCCCCGTCCTCAGTGCGTaGGACTTGCATAGACGCGAG +
Preference number: 5 (lower is better)
Translates to: GRGTERFSGWNLMETSVVPVLSA*DLHRRE
Trigger: CTCGCGTCTATGCAAGTCCAACGCACTGAGGACGGG...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS CCA 90 bp CTCGCTGGGGCAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAAGCTaGAAGTCTCTTTCACAGGAGAAGCTAATGTCCAGTTTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: LAGAGGGGGRGGGGS*KSLSQEKLMSSLQA
Trigger: AGCCTGCAAACTGGACATTAGCTTCTCCTGTGAAAGAGACTTCCAGCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTGCCCCAGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418738.2
CDS-3UTR CAA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGCCATTGGGATTCCCATaGGTGTCTACAGCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEPLGFP*VSTAQQ
Trigger: CTGCTGAGCTGTAGACACCAATGGGAATCCCAATGG...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381392.5
ENST00000381395.5
CDS-3UTR CAA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTCCATTGGGATTCCCATaGGTGTCTACAGCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESPLGFP*VSTAQQ
Trigger: CTGCTGAGCTGTAGACACCAATGGGAATCCCAATGG...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381392.5
ENST00000381395.5
CDS-3UTR CAA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTGCATCGACTTCCCCATaGGGATTCCCATTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESASTSP*GFPLVS
Trigger: AGACACCAATGGGAATCCCAATGGGGAAGTCGATGC...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000434045.6
CDS-3UTR CAA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCAGACTTGCGGCAGTTTaGCTCACTTCCGATTGCTGG +
Preference number: 5 (lower is better)
Translates to: SATAISNVAKLLPHSGWARLAAV*LTSDCW
Trigger: CCAGCAATCGGAAGTGAGCAAAACTGCCGCAAGTCT...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGACTTGCGGCAGTTTaGCTCACTTCCGATTGCTGG +
Preference number: 5 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESRLAAV*LTSDCW
Trigger: CCAGCAATCGGAAGTGAGCAAAACTGCCGCAAGTCT...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTCGATTTTGTACATGTTaGAAGATGCTGCTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: SNRQTSHTPRISARPPRTRFCTC*KMLLCF
Trigger: GAAGCACAGCAGCATCTTCAAACATGTACAAAATCG...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCGGGGAGGCGGGGCCTTTATTTTGCCAATaGTTTCTCAGCCAATTCGTT +
Preference number: 5 (lower is better)
Translates to: SSARWRGPRRVACFGEAGPLFCQ*FLSQFV
Trigger: AACGAATTGGCTGAGAAACAATTGGCAAAATAAAGG...CCCCGCCTCCCCGAAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000434045.6
CDS-3UTR CAA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGAGCCAGTCTGGGTTGTaGCTATTTTCGGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGESQSGL*LFSDGQ
Trigger: CTGGCCATCCGAAAATAGCAACAACCCAGACTGGCT...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCAGGAGCCAGTCTGGGTaGTTGCTATTTTCGGATGGC +
Preference number: 5 (lower is better)
Translates to: SATAISNVAKLLPHSGWARSQSG*LLFSDG
Trigger: GCCATCCGAAAATAGCAACAACCCAGACTGGCTCCT...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCGTGTGTGCTGCGTGTTaGTGTGCTGTGAGCTGTGTT +
Preference number: 5 (lower is better)
Translates to: SATAISNVAKLLPHSGWAVCAAC*CAVSCV
Trigger: AACACAGCTCACAGCACACAAACACGCAGCACACAC...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCTGTGCAGGTGGGTGCTaGCGTGTGCAACGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: QVIWGASKRFGSQANVGSCAGGC*RVQRVC
Trigger: GCACACACGTTGCACACGCAAGCACCCACCTGCACA...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp GTTTACCCTGAAAATTCCCGTGAGAAGGGAGATGGCGGTAGCAGCGACGTGCCCGGTGACATTCAGTGTTaGGCGTGGGGGTCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: VYPENSREKGDGGSSDVPGDIQC*AWGSSG
Trigger: ACCTGAAGACCCCCACGCCAAACACTGAATGTCACC...GGGCACGTCGCTGCTACCGCCATCTCCCTTCTCACGGGAATTTTCAGGGTAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTTTTCCCAAATCCGAGTaGCTCTGGGGACTTCGTAGG +
Preference number: 5 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESFPKSE*LWGLRR
Trigger: CCTACGAAGTCCCCAGAGCAACTCGGATTTGGGAAA...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR CAA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTCTAAGTAGCTCGCCTTaGCGGCCCACCCAAAATATC +
Preference number: 5 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESLSSSP*RPTQNI
Trigger: GATATTTTGGGTGGGCCGCAAAGGCGAGCTACTTAG...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR CAA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCCATTGGGATTCCCATaGGTGTCTGCATGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGPLGFP*VSAWPS
Trigger: GCTCGGCCATGCAGACACCAATGGGAATCCCAATGG...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR CAA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATACGTCCCTCTCGGACTaGGCGGGGGTAGCACAGTAC +
Preference number: 5 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNTSLSD*AGVAQY
Trigger: GTACTGTGCTACCCCCGCCAAGTCCGAGAGGGACGT...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGCTTCCAGGTGTCATATaGGAAGAACTTGCCCACGGG +
Preference number: 5 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAELPGVI*EELAHG
Trigger: CCCGTGGGCAAGTTCTTCCAATATGACACCTGGAAG...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGAGACTTGCGGCAGTTTaGCTCACTTCCGATTGCTGG +
Preference number: 5 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAERLAAV*LTSDCW
Trigger: CCAGCAATCGGAAGTGAGCAAAACTGCCGCAAGTCT...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp TCCAACCGCCAGACTTCCCACACTCCCCGCATCAGTGCACGGCCCCCGAGGACTTTTTTAGGATGGGAATaGAGATGTAAGATTTGGGGG +
Preference number: 5 (lower is better)
Translates to: SNRQTSHTPRISARPPRTFLGWE*RCKIWG
Trigger: CCCCCAAATCTTACATCTCAATTCCCATCCTAAAAA...AGTCCTCGGGGGCCGTGCACTGATGCGGGGAGTGTGGGAAGTCTGGCGGTTGGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGGCATCGACTTCCCCATaGGGATTCCCATTGGTGTCG +
Preference number: 5 (lower is better)
Translates to: GTERFSGWNLMETSVVRRASTSP*GFPLVS
Trigger: CGACACCAATGGGAATCCCAATGGGGAAGTCGATGC...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381389.5
CDS-3UTR CAA 90 bp TGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGCCGACCCAAGTGTGTTaGGGCAACGCTAGAGAGAAA +
Preference number: 5 (lower is better)
Translates to: CTCLKMLLCFLSPMEGAEPTQVC*GNAREK
Trigger: TTTCTCTCTAGCGTTGCCCAAACACACTTGGGTCGG...CTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR CAA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGGCATCGACTTCCCCATaGGGATTCCCATTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: RGTERFSGWNLMETSVVRASTSP*GFPLVS
Trigger: AGACACCAATGGGAATCCCAATGGGGAAGTCGATGC...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000434045.6
CDS-3UTR CAA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTTCATATTGGAAGAACTaGCCCACGGGGTATCTGGGG +
Preference number: 5 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGSYWKN*PTGYLG
Trigger: CCCCAGATACCCCGTGGGCAAGTTCTTCCAATATGA...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp GGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCCTTCCAGGTGTCATATaGGAAGAACTTGCCCACGGG +
Preference number: 5 (lower is better)
Translates to: GRGTERFSGWNLMETSVVLPGVI*EELAHG
Trigger: CCCGTGGGCAAGTTCTTCCAATATGACACCTGGAAG...GACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGCTTCCAGGTGTCATATaGGAAGAACTTGCCCACGGG +
Preference number: 5 (lower is better)
Translates to: RGTERFSGWNLMETSVVRLPGVI*EELAHG
Trigger: CCCGTGGGCAAGTTCTTCCAATATGACACCTGGAAG...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGACTTGCGGCAGTTTaGCTCACTTCCGATTGCTGG +
Preference number: 5 (lower is better)
Translates to: GTERFSGWNLMETSVVRRRLAAV*LTSDCW
Trigger: CCAGCAATCGGAAGTGAGCAAAACTGCCGCAAGTCT...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATCGCCGGGCTGCAGACTaGCGGCAGTTTTGCTCACTT +
Preference number: 5 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNRRAAD*RQFCSL
Trigger: AAGTGAGCAAAACTGCCGCAAGTCTGCAGCCCGGCG...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGAGCCAGTCTGGGTaGTTGCTATTTTCGGATGGC +
Preference number: 5 (lower is better)
Translates to: GTERFSGWNLMETSVVRRRSQSG*LLFSDG
Trigger: GCCATCCGAAAATAGCAACAACCCAGACTGGCTCCT...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTGTGTGTGCTGCGTGTTaGTGTGCTGTGAGCTGTGTT +
Preference number: 5 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGVCAAC*CAVSCV
Trigger: AACACAGCTCACAGCACACAAACACGCAGCACACAC...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATTGTGCAGGTGGGTGCTaGCGTGTGCAACGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNCAGGC*RVQRVC
Trigger: GCACACACGTTGCACACGCAAGCACCCACCTGCACA...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCACAATTGTGACAATTaGGCTCTTTGGGCTTCTGTC +
Preference number: 5 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFHNCDN*ALWASV
Trigger: GACAGAAGCCCAAAGAGCCAAATTGTCACAATTGTG...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGGCCACCACGATAATTaGGGGGTCTGGGGAAACCAT +
Preference number: 5 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGAGHHDN*GVWGNH
Trigger: ATGGTTTCCCCAGACCCCCAAATTATCGTGGTGGCC...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS-3UTR CAA 90 bp CAGGTAATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCTCATATTGGAAGAACTaGCCCACGGGGTATCTGGGG +
Preference number: 5 (lower is better)
Translates to: QVIWGASKRFGSQANVGSSYWKN*PTGYLG
Trigger: CCCCAGATACCCCGTGGGCAAGTTCTTCCAATATGA...GGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCTCATATTGGAAGAACTaGCCCACGGGGTATCTGGGG +
Preference number: 5 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGASYWKN*PTGYLG
Trigger: CCCCAGATACCCCGTGGGCAAGTTCTTCCAATATGA...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCCTTCCAGGTGTCATATaGGAAGAACTTGCCCACGGG +
Preference number: 5 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGALPGVI*EELAHG
Trigger: CCCGTGGGCAAGTTCTTCCAATATGACACCTGGAAG...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGAGACTTGCGGCAGTTTaGCTCACTTCCGATTGCTGG +
Preference number: 5 (lower is better)
Translates to: WNREIFGMEPDGNVRGQERLAAV*LTSDCW
Trigger: CCAGCAATCGGAAGTGAGCAAAACTGCCGCAAGTCT...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGCAAGTCCAGGCCAATTaGACTCAAAGTCCAAGGGAG +
Preference number: 5 (lower is better)
Translates to: RGTERFSGWNLMETSVVRQVQAN*TQSPRE
Trigger: CTCCCTTGGACTTTGAGTCAAATTGGCCTGGACTTG...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCAGCCAGTCTGGGTTGTaGCTATTTTCGGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGASQSGL*LFSDGQ
Trigger: CTGGCCATCCGAAAATAGCAACAACCCAGACTGGCT...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGCACAATTGTGACAATTaGGCTCTTTGGGCTTCTGTC +
Preference number: 5 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGEHNCDN*ALWASV
Trigger: GACAGAAGCCCAAAGAGCCAAATTGTCACAATTGTG...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp GGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGGTTAAAGGAGTTGAGTaGAGTCAAACACGGGCCGCA +
Preference number: 5 (lower is better)
Translates to: GTERFSGWNLMETSVVRRVKGVE*SQTRAA
Trigger: TGCGGCCCGTGTTTGACTCAACTCAACTCCTTTAAC...CCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTCCCAAGCATGGGATTTaGCCGGAAATATTAGCGTTA +
Preference number: 5 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGPKHGI*PEILAL
Trigger: TAACGCTAATATTTCCGGCAAAATCCCATGCTTGGG...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTCGATTTTGTACATGTTaGAAGATGCTGCTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGRFCTC*KMLLCF
Trigger: GAAGCACAGCAGCATCTTCAAACATGTACAAAATCG...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp ATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGCGATTTTGTACATGTTaGAAGATGCTGCTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: MFEDAAVLPQPDGGGRGERFCTC*KMLLCF
Trigger: GAAGCACAGCAGCATCTTCAAACATGTACAAAATCG...CTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp ATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTAGCCTGTTTCCAATTTCTGAGCTTTaGTGGGGTGTTTCTAAAAAG +
Preference number: 5 (lower is better)
Translates to: MLLCFLSPMEGAEESSLFPISEL*WGVSKK
Trigger: CTTTTTAGAAACACCCCACAAAAGCTCAGAAATTGG...AAACAGGCTACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000434045.6
CDS-3UTR CAA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGCAAGTCCAGGCCAATTaGACTCAAAGTCCAAGGGAG +
Preference number: 5 (lower is better)
Translates to: WNREIFGMEPDGNVRGQEQVQAN*TQSPRE
Trigger: CTCCCTTGGACTTTGAGTCAAATTGGCCTGGACTTG...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATGTGCCTCGAAGCGTTTaGGATCTCAGGCCAATGTGG +
Preference number: 5 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNVPRSV*DLRPMW
Trigger: CCACATTGGCCTGAGATCCAAAACGCTTCGAGGCAC...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp AATTTGGGGTGCCTCGAAGCGTTTTGGATCTCAGGCCAATGTGGGTTCCACAATGCATCGACTTCCCCATaGGGATTCCCATTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: NLGCLEAFWISGQCGFHNASTSP*GFPLVS
Trigger: AGACACCAATGGGAATCCCAATGGGGAAGTCGATGC...ATTGTGGAACCCACATTGGCCTGAGATCCAAAACGCTTCGAGGCACCCCAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGGAGGCTGCAGGATGGTCCAATTTCTGAGCTTTaGTGGGGTGTTTCTAAAAAG +
Preference number: 5 (lower is better)
Translates to: SGWNLMETSVVRRRLQDGPISEL*WGVSKK
Trigger: CTTTTTAGAAACACCCCACAAAAGCTCAGAAATTGG...ACCATCCTGCAGCCTCCTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000434045.6
CDS-3UTR CAA 90 bp TGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCGAGGAGAGTTTTTTAGGATGGGAATaGAGATGTAAGATTTGGGGG +
Preference number: 5 (lower is better)
Translates to: CLKMLLCFLSPMEGAEESFLGWE*RCKIWG
Trigger: CCCCCAAATCTTACATCTCAATTCCCATCCTAAAAA...ACTCTCCTCGGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp GGGACGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGACCATGAAAACATaGGAGAATCTTAGCGGGACT +
Preference number: 5 (lower is better)
Translates to: GTWNREIFGMEPDGNVRGQTMKT*ENLSGT
Trigger: AGTCCCGCTAAGATTCTCCAATGTTTTCATGGTCTG...ACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCCCTTTATTTTGCCAATaGTTTCTCAGCCAATTCGTT +
Preference number: 5 (lower is better)
Translates to: SATAISNVAKLLPHSGWAPLFCQ*FLSQFV
Trigger: AACGAATTGGCTGAGAAACAATTGGCAAAATAAAGG...GGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGAGCGATTTTGTACATGTTaGAAGATGCTGCTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: WNREIFGMEPDGNVRGQERFCTC*KMLLCF
Trigger: GAAGCACAGCAGCATCTTCAAACATGTACAAAATCG...CTCCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp TTTTGTACATGTTTGAAGATGCTGCTGTGCTTCCTCAGCCCGATGGAGGGGGCCCGATTTTGTACATGTTaGAAGATGCTGCTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: FCTCLKMLLCFLSPMEGARFCTC*KMLLCF
Trigger: GAAGCACAGCAGCATCTTCAAACATGTACAAAATCG...GGCCCCCTCCATCGGGCTGAGGAAGCACAGCAGCATCTTCAAACATGTACAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS-3UTR CAA 90 bp CGTGGAACCGAGAGATTTTCGGGATGGAACCTGATGGAAACGTCCGTGGTCAGGCCTTTATTTTGCCAATaGTTTCTCAGCCAATTCGTT +
Preference number: 5 (lower is better)
Translates to: RGTERFSGWNLMETSVVRPLFCQ*FLSQFV
Trigger: AACGAATTGGCTGAGAAACAATTGGCAAAATAAAGG...CCTGACCACGGACGTTTCCATCAGGTTCCATCCCGAAAATCTCTCGGTTCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000434045.6
CDS-3UTR CAA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGTGCCTCGAAGCGTTTaGGATCTCAGGCCAATGTGG +
Preference number: 5 (lower is better)
Translates to: WDFAGNISVKGVELSQTRVPRSV*DLRPMW
Trigger: CCACATTGGCCTGAGATCCAAAACGCTTCGAGGCAC...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGGTGTGTGCTGCGTGTTaGTGTGCTGTGAGCTGTGTT +
Preference number: 5 (lower is better)
Translates to: WDFAGNISVKGVELSQTRVCAAC*CAVSCV
Trigger: AACACAGCTCACAGCACACAAACACGCAGCACACAC...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS-3UTR CAA 90 bp TGGGATTTTGCCGGAAATATTAGCGTTAAAGGAGTTGAGTTGAGTCAAACACGGCGATTTTGTACATGTTaGAAGATGCTGCTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: WDFAGNISVKGVELSQTRRFCTC*KMLLCF
Trigger: GAAGCACAGCAGCATCTTCAAACATGTACAAAATCG...CCGTGTTTGACTCAACTCAACTCCTTTAACGCTAATATTTCCGGCAAAATCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
CDS CAA 90 bp GGGCGGAGTGGAGGCTGCACCCGGACCGCGGGCGCCCAGCTCGGTTaGGGCCGACGGAGCCCTCTGCCGTCGCGAGCCCGGGCCTCGGGA +
Preference number: 6 (lower is better)
Translates to: GRSGGCTRTAGAQLG*GRRSPLPSRARASG
Trigger: TCCCGAGGCCCGGGCTCGCGACGGCAGAGGGCTCCGTCGGCCCAAACCGAGCTGGGCGCCCGCGGTCCGGGTGCAGCCTCCACTCCGCCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS CAA 90 bp GGGAGTCAGCAGCGAGGCAGCGGGCGGCGTCGACGCGGGGCCGCCTaGCCCGATGGAGGCGCTGGTGGGCAGAGCGCGGGCAGGCGTGGG +
Preference number: 6 (lower is better)
Translates to: GSQQRGSGRRRRGAA*PDGGAGGQSAGRRG
Trigger: CCCACGCCTGCCCGCGCTCTGCCCACCAGCGCCTCCATCGGGCAAGGCGGCCCCGCGTCGACGCCGCCCGCTGCCTCGCTGCTGACTCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416167.7
CDS GCA 72 bp CGGGCGCCCAGCTCGGTTTGGGCCGACGGAGCCCTCTaGCGTCGCGAGCCCGGGCCTCGGGAGGGGGACAGG +
Preference number: 6 (lower is better)
Translates to: RAPSSVWADGAL*RREPGPREGDR
Trigger: CCTGTCCCCCTCCCGAGGCCCGGGCTCGCGACGGCAGAGGGCTCCGTCGGCCCAAACCGAGCTGGGCGCCCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS CCA 72 bp GAGGCTGCACCCGGACCGCGGGCGCCCAGCTCGGTTTaGGCCGACGGAGCCCTCTGCCGTCGCGAGCCCGGG +
Preference number: 6 (lower is better)
Translates to: EAAPGPRAPSSV*ADGALCRREPG
Trigger: CCCGGGCTCGCGACGGCAGAGGGCTCCGTCGGCCCAAACCGAGCTGGGCGCCCGCGGTCCGGGTGCAGCCTC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS CAA 72 bp GGAGGCTGCACCCGGACCGCGGGCGCCCAGCTCGGTTaGGGCCGACGGAGCCCTCTGCCGTCGCGAGCCCGG +
Preference number: 6 (lower is better)
Translates to: GGCTRTAGAQLG*GRRSPLPSRAR
Trigger: CCGGGCTCGCGACGGCAGAGGGCTCCGTCGGCCCAAACCGAGCTGGGCGCCCGCGGTCCGGGTGCAGCCTCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS CCA 72 bp GCCCTCCTGCCGGACACTCCTCTGCCAGCGCCGCTCTaGCCGAGTCGCGGGGGCCGAATGTGCGACGGGGCA +
Preference number: 6 (lower is better)
Translates to: ALLPDTPLPAPL*PSRGGRMCDGA
Trigger: TGCCCCGTCGCACATTCGGCCCCCGCGACTCGGCCAGAGCGGCGCTGGCAGAGGAGTGTCCGGCAGGAGGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS CAA 90 bp TGCCGCCCACCTCCCTGCTGCGTGTCGCAAACCGAACAGCGGGCGTaGGCCCTCCTGCCGGACACTCCTCTGCCAGCGCCGCTCTGGCCG +
Preference number: 6 (lower is better)
Translates to: CRPPPCCVSQTEQRA*ALLPDTPLPAPLWP
Trigger: CGGCCAGAGCGGCGCTGGCAGAGGAGTGTCCGGCAGGAGGGCCAACGCCCGCTGTTCGGTTTGCGACACGCAGCAGGGAGGTGGGCGGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS GCA 72 bp GCGTGTCGCAAACCGAACAGCGGGCGTTGGCCCTCCTaGCGGACACTCCTCTGCCAGCGCCGCTCTGGCCGA +
Preference number: 6 (lower is better)
Translates to: ACRKPNSGRWPS*RTLLCQRRSGR
Trigger: TCGGCCAGAGCGGCGCTGGCAGAGGAGTGTCCGGCAGGAGGGCCAACGCCCGCTGTTCGGTTTGCGACACGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS GCA 72 bp GTGTCTGGAAGCCGGCGACGCTGCCGCCCACCTCCCTaGTGCGTGTCGCAAACCGAACAGCGGGCGTTGGCC +
Preference number: 6 (lower is better)
Translates to: VSGSRRRCRPPP*CVSQTEQRALA
Trigger: GGCCAACGCCCGCTGTTCGGTTTGCGACACGCAGCAGGGAGGTGGGCGGCAGCGTCGCCGGCTTCCAGACAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS GCA 72 bp GGGGTCTGGGGAAACCATCTCCGCGAAGCTGGAGGCTaGGTCCGCGGGCGCACCAGGAGCTCAGGCAGCGAG +
Preference number: 6 (lower is better)
Translates to: GVWGNHLREAGG*VRGRTRSSGSE
Trigger: CTCGCTGCCTGAGCTCCTGGTGCGCCCGCGGACGCAGCCTCCAGCTTCGCGGAGATGGTTTCCCCAGACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS CCA 72 bp CTCCCTGCTGCGTGTCGCAAACCGAACAGCGGGCGTTaGCCCTCCTGCCGGACACTCCTCTGCCAGCGCCGC +
Preference number: 6 (lower is better)
Translates to: LPAACRKPNSGR*PSCRTLLCQRR
Trigger: GCGGCGCTGGCAGAGGAGTGTCCGGCAGGAGGGCCAACGCCCGCTGTTCGGTTTGCGACACGCAGCAGGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS CAA 72 bp CCTCCCTGCTGCGTGTCGCAAACCGAACAGCGGGCGTaGGCCCTCCTGCCGGACACTCCTCTGCCAGCGCCG +
Preference number: 6 (lower is better)
Translates to: PPCCVSQTEQRA*ALLPDTPLPAP
Trigger: CGGCGCTGGCAGAGGAGTGTCCGGCAGGAGGGCCAACGCCCGCTGTTCGGTTTGCGACACGCAGCAGGGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS CCA 72 bp CAGGCAGCGAGCGATCGAACGCTCTGTGGCAGGCGGTaGACGCTGCTGAAGGTGAGCGAGACCCCGGGGCCA +
Preference number: 6 (lower is better)
Translates to: QAASDRTLCGRR*TLLKVSETPGP
Trigger: TGGCCCCGGGGTCTCGCTCACCTTCAGCAGCGTCCACCGCCTGCCACAGAGCGTTCGATCGCTCGCTGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381389.5
ENST00000434045.6
CDS CCA 72 bp GGGTGTCCACCAGCTCCCCGCCGCACAGGGTCTCACTaGGGCGGTAAGCAGCAATGCAGCACGAGGCGAAGG +
Preference number: 6 (lower is better)
Translates to: GCPPAPRRTGSH*GGKQQCSTRRR
Trigger: CCTTCGCCTCGTGCTGCATTGCTGCTTACCGCCCCAGTGAGACCCTGTGCGGCGGGGAGCTGGTGGACACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS CAA 72 bp AGCACGGTCGGAGGGGTCGACACGTCCCTCTCGGACTaGGCGGGGGTAGCACAGTACGTCTCCAGGAGGGCC +
Preference number: 6 (lower is better)
Translates to: STVGGVDTSLSD*AGVAQYVSRRA
Trigger: GGCCCTCCTGGAGACGTACTGTGCTACCCCCGCCAAGTCCGAGAGGGACGTGTCGACCCCTCCGACCGTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS TCA 72 bp TTCCTGGACACGGGGAAGCCCTCCCTGTCCACGTCCTaGGGGCGCGCGGCCGACCCAAGTGTGTTTGGGCAA +
Preference number: 6 (lower is better)
Translates to: FLDTGKPSLSTS*GRAADPSVFGQ
Trigger: TTGCCCAAACACACTTGGGTCGGCCGCGCGCCCTCAGGACGTGGACAGGGAGGGCTTCCCCGTGTCCAGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS GCA 72 bp CCAGGTCACAGCTGCGGAAACAGCACTCCTCAACGATaGCACGGCTGCGACGGCTCACACGGCTTGCGGGCC +
Preference number: 6 (lower is better)
Translates to: PGHSCGNSTPQR*HGCDGSHGLRA
Trigger: GGCCCGCAAGCCGTGTGAGCCGTCGCAGCCGTGGCATCGTTGAGGAGTGCTGTTTCCGCAGCTGTGACCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS GCA 72 bp CATTGGGATTCCCATTGGTGTCGCGAAGCTGGAGGCTaGGTCCGCGGGCGCACCAGGAGCTCAGGCAGCGAG +
Preference number: 6 (lower is better)
Translates to: HWDSHWCREAGG*VRGRTRSSGSE
Trigger: CTCGCTGCCTGAGCTCCTGGTGCGCCCGCGGACGCAGCCTCCAGCTTCGCGACACCAATGGGAATCCCAATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381389.5
CDS CAA 90 bp TTGTCCGGAAGCACGGTCGGAGGGGTCGACACGTCCCTCTCGGACTaGGCGGGGGTAGCACAGTACGTCTCCAGGAGGGCCAGGTCACAG +
Preference number: 6 (lower is better)
Translates to: LSGSTVGGVDTSLSD*AGVAQYVSRRARSQ
Trigger: CTGTGACCTGGCCCTCCTGGAGACGTACTGTGCTACCCCCGCCAAGTCCGAGAGGGACGTGTCGACCCCTCCGACCGTGCTTCCGGACAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS GCA 72 bp CTCAACGATGCCACGGCTGCGACGGCTCACACGGCTTaGGGGCCTGCCTGGAAGTCTGAAGTAGAAGCCGCG +
Preference number: 6 (lower is better)
Translates to: LNDATAATAHTA*GPAWKSEVEAA
Trigger: CGCGGCTTCTACTTCAGACTTCCAGGCAGGCCCGCAAGCCGTGTGAGCCGTCGCAGCCGTGGCATCGTTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381392.5
ENST00000381406.8
CDS GCA 72 bp AGCTGCGGAAACAGCACTCCTCAACGATGCCACGGCTaGGACGGCTCACACGGCTTGCGGGCCTGCCTGGAA +
Preference number: 6 (lower is better)
Translates to: SCGNSTPQRCHG*DGSHGLRACLE
Trigger: TTCCAGGCAGGCCCGCAAGCCGTGTGAGCCGTCGCAGCCGTGGCATCGTTGAGGAGTGCTGTTTCCGCAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381392.5
ENST00000381406.8
CDS CCA 72 bp ACCAGGAGCTCAGGCAGCGAGCGATCGAACGCTCTGTaGCAGGCGGTGGACGCTGCTGAAGGTGAGCGAGAC +
Preference number: 6 (lower is better)
Translates to: TRSSGSERSNAL*QAVDAAEGERD
Trigger: GTCTCGCTCACCTTCAGCAGCGTCCACCGCCTGCCACAGAGCGTTCGATCGCTCGCTGCCTGAGCTCCTGGT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381389.5
ENST00000434045.6
CDS TCA 72 bp GTAGAGCAATCAGGGGACGGTGACGTTTGGCCTCCCTaGACGCCTCGAGCTCCTTGGCGAGCACGTGACCCC +
Preference number: 6 (lower is better)
Translates to: VEQSGDGDVWPP*TPRAPWRARDP
Trigger: GGGGTCACGTGCTCGCCAAGGAGCTCGAGGCGTTCAGGGAGGCCAAACGTCACCGTCCCCTGATTGCTCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS TCA 72 bp GCGGGGTCTTGGGTGGGTAGAGCAATCAGGGGACGGTaGCGTTTGGCCTCCCTGAACGCCTCGAGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: AGSWVGRAIRGR*RLASLNASSSL
Trigger: CAAGGAGCTCGAGGCGTTCAGGGAGGCCAAACGTCACCGTCCCCTGATTGCTCTACCCACCCAAGACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS GCA 72 bp AGGGCAGGCAGGCCCCTGCGCAGGCGCTGGGTGGACTaGTTCCAGGTGTCATATTGGAAGAACTTGCCCACG +
Preference number: 6 (lower is better)
Translates to: RAGRPLRRRWVD*FQVSYWKNLPT
Trigger: CGTGGGCAAGTTCTTCCAATATGACACCTGGAAGCAGTCCACCCAGCGCCTGCGCAGGGGCCTGCCTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS GCA 72 bp TTGGGATTCCCATTGGTGTCTGGAAGCCGGCGACGCTaGCGCCCACCTCCCTGCTGCGTGTCGCAAACCGAA +
Preference number: 6 (lower is better)
Translates to: LGFPLVSGSRRR*RPPPCCVSQTE
Trigger: TTCGGTTTGCGACACGCAGCAGGGAGGTGGGCGGCAGCGTCGCCGGCTTCCAGACACCAATGGGAATCCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS CCA 72 bp GCAGGAGGGCAGGCAGGCCCCTGCGCAGGCGCTGGGTaGACTGCTTCCAGGTGTCATATTGGAAGAACTTGC +
Preference number: 6 (lower is better)
Translates to: AGGQAGPCAGAG*TASRCHIGRTC
Trigger: GCAAGTTCTTCCAATATGACACCTGGAAGCAGTCCACCCAGCGCCTGCGCAGGGGCCTGCCTGCCCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS CCA 72 bp GGGATTCCCATTGGTGTAGCTCAGCAGAAGGCTCGCTaGGGCAGGAGGAGGAGGAGGAAGAGGAGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: GIPIGVAQQKAR*GRRRRRKRRRR
Trigger: CCTCCTCCTCCTCTTCCTCCTCCTCCTCCTGCCCCAGCGAGCCTTCTGCTGAGCTACACCAATGGGAATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418738.2
CDS CCA 72 bp TTCGGTCTCGGGGGCCACCACGATAATTTGGGGGTCTaGGGAAACCATCTCCGCGAAGCTGGAGGCTGCGTC +
Preference number: 6 (lower is better)
Translates to: FGLGGHHDNLGV*GNHLREAGGCV
Trigger: GACGCAGCCTCCAGCTTCGCGGAGATGGTTTCCCCAGACCCCCAAATTATCGTGGTGGCCCCCGAGACCGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS CAA 90 bp CGCAGGCGCTGGGTGGACTGCTTCCAGGTGTCATATTGGAAGAACTaGCCCACGGGGTATCTGGGGAAGTTGTCCGGAAGCACGGTCGGA +
Preference number: 6 (lower is better)
Translates to: RRRWVDCFQVSYWKN*PTGYLGKLSGSTVG
Trigger: TCCGACCGTGCTTCCGGACAACTTCCCCAGATACCCCGTGGGCAAGTTCTTCCAATATGACACCTGGAAGCAGTCCACCCAGCGCCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS GCA 72 bp TGGATAATGGTTACCCCGTCCTCAGTGCGTTGGACTTaGATAGACGCGAGTTCGGTCTCGGGGGCCACCACG +
Preference number: 6 (lower is better)
Translates to: WIMVTPSSVRWT*IDASSVSGATT
Trigger: CGTGGTGGCCCCCGAGACCGAACTCGCGTCTATGCAAGTCCAACGCACTGAGGACGGGGTAACCATTATCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS CAA 72 bp CTGGATAATGGTTACCCCGTCCTCAGTGCGTTGGACTaGCATAGACGCGAGTTCGGTCTCGGGGGCCACCAC +
Preference number: 6 (lower is better)
Translates to: LDNGYPVLSALD*HRREFGLGGHH
Trigger: GTGGTGGCCCCCGAGACCGAACTCGCGTCTATGCAAGTCCAACGCACTGAGGACGGGGTAACCATTATCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS CCA 72 bp CGCAGGCGCTGGGTGGACTGCTTCCAGGTGTCATATTaGAAGAACTTGCCCACGGGGTATCTGGGGAAGTTG +
Preference number: 6 (lower is better)
Translates to: RRRWVDCFQVSY*KNLPTGYLGKL
Trigger: CAACTTCCCCAGATACCCCGTGGGCAAGTTCTTCCAATATGACACCTGGAAGCAGTCCACCCAGCGCCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS CAA 72 bp GCGCAGGCGCTGGGTGGACTGCTTCCAGGTGTCATATaGGAAGAACTTGCCCACGGGGTATCTGGGGAAGTT +
Preference number: 6 (lower is better)
Translates to: AQALGGLLPGVI*EELAHGVSGEV
Trigger: AACTTCCCCAGATACCCCGTGGGCAAGTTCTTCCAATATGACACCTGGAAGCAGTCCACCCAGCGCCTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS CCA 72 bp CAAGAAGGTGAGAAGCACCAGCATCGACTTCCCCATTaGGATTCCCATTGGTGTCGCGAAGCTGGAGGCTGC +
Preference number: 6 (lower is better)
Translates to: QEGEKHQHRLPH*DSHWCREAGGC
Trigger: GCAGCCTCCAGCTTCGCGACACCAATGGGAATCCCAATGGGGAAGTCGATGCTGGTGCTTCTCACCTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381389.5
CDS CCA 72 bp ACGGAGAGAAACAGAAAGCGTGTAATTAATCCACTTTaGTTCGGCGAAGGCGAGAGGGCGGGCGTGAGGGGG +
Preference number: 6 (lower is better)
Translates to: TERNRKRVINPL*FGEGERAGVRG
Trigger: CCCCCTCACGCCCGCCCTCTCGCCTTCGCCGAACCAAAGTGGATTAATTACACGCTTTCTGTTTCTCTCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS CCA 72 bp CAAGAAGGTGAGAAGCACCAGCATCGACTTCCCCATTaGGATTCCCATTGGTGTCTGGAAGCCGGCGACGCT +
Preference number: 6 (lower is better)
Translates to: QEGEKHQHRLPH*DSHWCLEAGDA
Trigger: AGCGTCGCCGGCTTCCAGACACCAATGGGAATCCCAATGGGGAAGTCGATGCTGGTGCTTCTCACCTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381406.8
ENST00000416167.7
CDS CAA 72 bp GCCGAGCTCACCGGGGTGCGTCTAAGTAGCTCGCCTTaGCGGCCCACCCAAAATATCTGGATAATGGTTACC +
Preference number: 6 (lower is better)
Translates to: AELTGVRLSSSP*RPTQNIWIMVT
Trigger: GGTAACCATTATCCAGATATTTTGGGTGGGCCGCAAAGGCGAGCTACTTAGACGCACCCCGGTGAGCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS GCA 72 bp GGGTGGACTGCTTCCAGGTGTCATATTGGAAGAACTTaGCCACGGGGTATCTGGGGAAGTTGTCCGGAAGCA +
Preference number: 6 (lower is better)
Translates to: GWTASRCHIGRT*PRGIWGSCPEA
Trigger: TGCTTCCGGACAACTTCCCCAGATACCCCGTGGGCAAGTTCTTCCAATATGACACCTGGAAGCAGTCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS CCA 72 bp AATATCTGGATAATGGTTACCCCGTCCTCAGTGCGTTaGACTTGCATAGACGCGAGTTCGGTCTCGGGGGCC +
Preference number: 6 (lower is better)
Translates to: NIWIMVTPSSVR*TCIDASSVSGA
Trigger: GGCCCCCGAGACCGAACTCGCGTCTATGCAAGTCCAACGCACTGAGGACGGGGTAACCATTATCCAGATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS CCA 72 bp CAAGAAGGTGAGAAGCACCAGCATCGACTTCCCCATTaGGATTCCCATTGGTGTCTGCATGGCCGAGCTCAC +
Preference number: 6 (lower is better)
Translates to: QEGEKHQHRLPH*DSHWCLHGRAH
Trigger: GTGAGCTCGGCCATGCAGACACCAATGGGAATCCCAATGGGGAAGTCGATGCTGGTGCTTCTCACCTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS CAA 72 bp TGGGTGGACTGCTTCCAGGTGTCATATTGGAAGAACTaGCCCACGGGGTATCTGGGGAAGTTGTCCGGAAGC +
Preference number: 6 (lower is better)
Translates to: WVDCFQVSYWKN*PTGYLGKLSGS
Trigger: GCTTCCGGACAACTTCCCCAGATACCCCGTGGGCAAGTTCTTCCAATATGACACCTGGAAGCAGTCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000381389.5
ENST00000381392.5
ENST00000381395.5
ENST00000381406.8
ENST00000416167.7
ENST00000418738.2
ENST00000434045.6
CDS CAA 72 bp AAATATCTGGATAATGGTTACCCCGTCCTCAGTGCGTaGGACTTGCATAGACGCGAGTTCGGTCTCGGGGGC +
Preference number: 6 (lower is better)
Translates to: KYLDNGYPVLSA*DLHRREFGLGG
Trigger: GCCCCCGAGACCGAACTCGCGTCTATGCAAGTCCAACGCACTGAGGACGGGGTAACCATTATCCAGATATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS CCA 72 bp CTAAGTAGCTCGCCTTTGCGGCCCACCCAAAATATCTaGATAATGGTTACCCCGTCCTCAGTGCGTTGGACT +
Preference number: 6 (lower is better)
Translates to: LSSSPLRPTQNI*IMVTPSSVRWT
Trigger: AGTCCAACGCACTGAGGACGGGGTAACCATTATCCAGATATTTTGGGTGGGCCGCAAAGGCGAGCTACTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434045.6
CDS CCA 72 bp AACGCTAGAGAGAAATTTCCCAAATCCGAGTTGCTCTaGGGACTTCGTAGGAGACAGAGAGGCCCGAAACCA +
Preference number: 6 (lower is better)
Translates to: NAREKFPKSELL*GLRRRQRGPKP
Trigger: TGGTTTCGGGCCTCTCTGTCTCCTACGAAGTCCCCAGAGCAACTCGGATTTGGGAAATTTCTCTCTAGCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434045.6