RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000017427

Ensembl transcript IDs: ENST00000307046.8, ENST00000337514.11, ENST00000392904.5, ENST00000392905.7, ENST00000424202.6, ENST00000481539.1, ENST00000644491.1

Found 254 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTaGACTTTTGTGTCTGAAGTTCCTCTTGGAAGGCATAACTGGGGG +
Preference number: 1 (lower is better)
Translates to: IPQFPLWTRQSNLHQ*TFVSEVPLGRHNWG
Trigger: CCCCCAGTTATGCCTTCCAAGAGGAACTTCAGACACAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR GCA 90 bp CTTTTTCCATTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTTaGATCAGTGGACTTTTGTGTCTGAAGTTCCTCTTGGAAGGCATA +
Preference number: 1 (lower is better)
Translates to: LFPFHSFLSGLASPI*ISGLLCLKFLLEGI
Trigger: TATGCCTTCCAAGAGGAACTTCAGACACAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAATGGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR TCA 90 bp TTCAAGGAAGTGATTTCTTTTCAGTATTCCATTGGATCCTTAGGGTaGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCT +
Preference number: 1 (lower is better)
Translates to: FKEVISFQYSIGSLG*MCVCVCVCVCVCVS
Trigger: AGACACACACACACACACACACACACACACACACACACACATTCACCCTAAGGATCCAATGGAATACTGAAAAGAAATCACTTCCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR CCA 90 bp TGCATCCAACTTATATTTGGTACAAATGCCACAGATGGAATCTTGTaGGTTAGAATTGGTGTGCTTCTTGACGACTTGCTGCTGCTTTTG +
Preference number: 1 (lower is better)
Translates to: CIQLIFGTNATDGIL*VRIGVLLDDLLLLL
Trigger: CAAAAGCAGCAGCAAGTCGTCAAGAAGCACACCAATTCTAACCCACAAGATTCCATCTGTGGCATTTGTACCAAATATAAGTTGGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR GCA 90 bp AAAGATCAACAGCAATCTACCAACTCCAGGACCATTTTTGCAAGGTaGAAATCACTCCTAAAGACAATGTTGGAATGTTTACTTGTGTAT +
Preference number: 1 (lower is better)
Translates to: KDQQQSTNSRTIFAR*KSLLKTMLECLLVY
Trigger: ATACACAAGTAAACATTCCAACATTGTCTTTAGGAGTGATTTGCACCTTGCAAAAATGGTCCTGGAGTTGGTAGATTGCTGTTGATCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR GCA 90 bp CCTTCTGAGCAGGCATGGGAAATTTCTTGTTGTGATGGAAGTTTTTaGCTTTCAACTGGAAACTCTAGTCAAGCATATTTTAACAAACTT +
Preference number: 1 (lower is better)
Translates to: PSEQAWEISCCDGSF*LSTGNSSQAYFNKL
Trigger: AAGTTTGTTAAAATATGCTTGACTAGAGTTTCCAGTTGAAAGGCAAAAACTTCCATCACAACAAGAAATTTCCCATGCCTGCTCAGAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR GCA 90 bp ATTGATAAAAGATCAACAGCAATCTACCAACTCCAGGACCATTTTTaGAAGGTGCAAATCACTCCTAAAGACAATGTTGGAATGTTTACT +
Preference number: 1 (lower is better)
Translates to: IDKRSTAIYQLQDHF*KVQITPKDNVGMFT
Trigger: AGTAAACATTCCAACATTGTCTTTAGGAGTGATTTGCACCTTGCAAAAATGGTCCTGGAGTTGGTAGATTGCTGTTGATCTTTTATCAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR GCA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTATTAACAGGTAACTCGTaGAGAGCAAAGGATCCTGCG +
Preference number: 2 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVLTGNS*RAKDPA
Trigger: CGCAGGATCCTTTGCTCTGCACGAGTTACCTGTTAA...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR TCA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTAAATTGGTGTGCTTCTTaGCGACTTGCTGCTGCTTTT +
Preference number: 2 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVNWCAS*RLAAAF
Trigger: AAAAGCAGCAGCAAGTCGTCAAGAAGCACACCAATT...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR TCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCAAGGTCACACAGTGGTaGGTCCATGACACAGCTGGC +
Preference number: 2 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGKVTQW*VHDTAG
Trigger: GCCAGCTGTGTCATGGACTCACCACTGTGTGACCTT...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR TCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCGCAACTCAAGCGCCCTaGTGTTGCACCCTTACAGCA +
Preference number: 2 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGATQAP*CCTLTA
Trigger: TGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGC...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR TCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCGACAAGGTTGCTGAATaGATGGCTCCAGCAGCCAAG +
Preference number: 2 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGDKVAE*MAPAAK
Trigger: CTTGGCTGCTGGAGCCATTCATTCAGCAACCTTGTC...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCCAAAGGATCCTGCGGTaGCATGTCACTCTTCACTCC +
Preference number: 2 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGQRILR*HVTLHS
Trigger: GGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTG...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CCA 90 bp AGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGTGTCTGACACCCATGCATTTGTaGCTCTTGAGAGGCAGGGAC +
Preference number: 2 (lower is better)
Translates to: SFLSGLASPICISGLLCLTPMHL*LLRGRD
Trigger: GTCCCTGCCTCTCAAGAGCCACAAATGCATGGGTGT...CAGACACAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR TCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCACTTGCTGCTGCTTTTaGGGAGGCCAAATTCGGCAA +
Preference number: 2 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGTCCCF*GGQIRQ
Trigger: TTGCCGAATTTGGCCTCCTCAAAAGCAGCAGCAAGT...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR GCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGCAGAGCAAAGGATCCTaGGGTGGCATGTCACTCTTC +
Preference number: 2 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRQSKGS*GGMSLF
Trigger: GAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTG...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CCA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTAACTTGTGTATTTCATTaGGGGAAACGCCCATCTTTT +
Preference number: 2 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVTCVFH*GKRPSF
Trigger: AAAAGATGGGCGTTTCCCCCAATGAAATACACAAGT...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR GCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCGGGTTAGAATTGGTGTaGTTCTTGACGACTTGCTGC +
Preference number: 2 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGGLELV*FLTTCC
Trigger: GCAGCAAGTCGTCAAGAAGCACACCAATTCTAACCC...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR GCA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTAAAATTCCTAGCCTTCTaGTTTTTCCATTCCACAGTT +
Preference number: 2 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVKFLAF*FFHSTV
Trigger: AACTGTGGAATGGAAAAAGCAGAAGGCTAGGAATTT...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CCA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTACATCCAACTTATATTTaGTACAAATGCCACAGATGG +
Preference number: 2 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVHPTYI*YKCHRW
Trigger: CCATCTGTGGCATTTGTACCAAATATAAGTTGGATG...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCCTTGGAAGGCATAACTaGGGGGACTTTGCCTTCTTT +
Preference number: 2 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGLGRHN*GDFAFF
Trigger: AAAGAAGGCAAAGTCCCCCCAGTTATGCCTTCCAAG...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGCCACAGTTTCCTCTCTaGACTCGCCAGTCCAATTTG +
Preference number: 2 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRPQFPL*TRQSNL
Trigger: CAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGG...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR CAA 90 bp GCTTTTTCCATTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTaGCATCAGTGGACTTTTGTGTCTGAAGTTCCTCTTGGAAGGCAT +
Preference number: 2 (lower is better)
Translates to: AFSIPQFPLWTRQSN*HQWTFVSEVPLGRH
Trigger: ATGCCTTCCAAGAGGAACTTCAGACACAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAATGGAAAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CCA 90 bp TTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGGCCTTCTTTCCCAAATaGATGGTGTTTTCAGTACCC +
Preference number: 2 (lower is better)
Translates to: FHSFLSGLASPICISGLLAFFPK*MVFSVP
Trigger: GGGTACTGAAAACACCATCCATTTGGGAAAGAAGGC...CAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR GCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGCTCGCCAGTCCAATTTaGATCAGTGGACTTTTGTGT +
Preference number: 2 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRLASPI*ISGLLC
Trigger: ACACAAAAGTCCACTGATGCAAATTGGACTGGCGAG...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CCA 90 bp AGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGTGTCTGTCTTTCCCAAATGGATaGTGTTTTCAGTACCCTTCC +
Preference number: 2 (lower is better)
Translates to: SFLSGLASPICISGLLCLSFPNG*CFQYPS
Trigger: GGAAGGGTACTGAAAACACCATCCATTTGGGAAAGA...CAGACACAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCTGGCTCCACTAAATaGGGCCTTCTTTTTGCATAT +
Preference number: 2 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRAGSTK*GLLFAY
Trigger: ATATGCAAAAAGAAGGCCCCATTTAGTGGAGCCAGC...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR CAA 90 bp TTGTGGGTTAGAATTGGTGTGCTTCTTGACGACTTGCTGCTGCTTTaGAGGAGGCCAAATTCGGCAAATATAAAGGTTATGAAGGGAGGT +
Preference number: 2 (lower is better)
Translates to: LWVRIGVLLDDLLLL*RRPNSANIKVMKGG
Trigger: ACCTCCCTTCATAACCTTTATATTTGCCGAATTTGGCCTCCTCAAAAGCAGCAGCAAGTCGTCAAGAAGCACACCAATTCTAACCCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR CAA 90 bp ACAGATGGAATCTTGTGGGTTAGAATTGGTGTGCTTCTTGACGACTaGCTGCTGCTTTTGAGGAGGCCAAATTCGGCAAATATAAAGGTT +
Preference number: 2 (lower is better)
Translates to: TDGILWVRIGVLLDD*LLLLRRPNSANIKV
Trigger: AACCTTTATATTTGCCGAATTTGGCCTCCTCAAAAGCAGCAGCAAGTCGTCAAGAAGCACACCAATTCTAACCCACAAGATTCCATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR TCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCGGAAATTTCTTGTTGTaGTGGAAGTTTTTGCCTTTC +
Preference number: 2 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGGNFLL*WKFLPF
Trigger: GAAAGGCAAAAACTTCCATCACAACAAGAAATTTCC...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGAGTTGGCCAGTTATTTaGATAGCTTCACTGACAAGA +
Preference number: 2 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRSWPVI*IASLTR
Trigger: TCTTGTCAGTGAAGCTATCCAAATAACTGGCCAACT...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR TCA 90 bp GTAAAGTTTTGGGTTGTGACATTTTGGTTGCTCCTTTCTATGAAATCTGAGTCACTTAGACAAGGTTGCTaGATGAATGGCTCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: VKFWVVTFWLLLSMKSESLRQGC*MNGSSS
Trigger: GCTGCTGGAGCCATTCATTCAGCAACCTTGTCTAAG...TGACTCAGATTTCATAGAAAGGAGCAACCAAAATGTCACAACCCAAAACTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR TCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGTGTTCATTTCTTCCATaGGAAAAAGAAACCAGGACT +
Preference number: 2 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRCSFLP*EKETRT
Trigger: AGTCCTGGTTTCTTTTTCTCATGGAAGAAATGAACA...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCATGCCTAAAAATGATTaGCCTCAAAGTTGCAACTAT +
Preference number: 2 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGMPKND*PQSCNY
Trigger: ATAGTTGCAACTTTGAGGCCAATCATTTTTAGGCAT...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGCTTTTAACAACTAGTTaGCCAGTTATTTGGATAGCT +
Preference number: 2 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRLLTTS*PVIWIA
Trigger: AGCTATCCAAATAACTGGCCAACTAGTTGTTAAAAG...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CCA 90 bp GTAAAGTTTTGGGTTGTGACATTTTGGTTGCTCCTTTCTATGAAATCTGAGTCATTCAGCTTTCCTCCTTaGGGGATTTTTGACTGTGGA +
Preference number: 2 (lower is better)
Translates to: VKFWVVTFWLLLSMKSESFSFPP*GIFDCG
Trigger: TCCACAGTCAAAAATCCCCCAAGGAGGAAAGCTGAA...TGACTCAGATTTCATAGAAAGGAGCAACCAAAATGTCACAACCCAAAACTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CAA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTAACAACACCCATGCATTaGTGGCTCTTGAGAGGCAGG +
Preference number: 3 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVTTPMH*WLLRGR
Trigger: CCTGCCTCTCAAGAGCCACAAATGCATGGGTGTTGT...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CAA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCTCAAGCGCCCTGATGTaGCACCCTTACAGCAACCCA +
Preference number: 3 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGSSALM*HPYSNP
Trigger: TGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGA...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CAA 90 bp TTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGGTGCTTCTTGACGACTaGCTGCTGCTTTTGAGGAGG +
Preference number: 3 (lower is better)
Translates to: FHSFLSGLASPICISGLLVLLDD*LLLLRR
Trigger: CCTCCTCAAAAGCAGCAGCAAGTCGTCAAGAAGCAC...CAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CAA 90 bp TTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGTCAGTACCCTTCCCCTaGTGTCATCTTTGGCTCCAG +
Preference number: 3 (lower is better)
Translates to: FHSFLSGLASPICISGLLSVPFP*CHLWLQ
Trigger: CTGGAGCCAAAGATGACACAAGGGGAAGGGTACTGA...CAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CAA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGACTTGCTGCTGCTTTaGAGGAGGCCAAATTCGGCA +
Preference number: 3 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRDLLLL*RRPNSA
Trigger: TGCCGAATTTGGCCTCCTCAAAAGCAGCAGCAAGTC...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CAA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCACTCCAGGACCATTTTaGCAAGGTGCAAATCACTCC +
Preference number: 3 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGTPGPF*QGANHS
Trigger: GGAGTGATTTGCACCTTGCAAAAATGGTCCTGGAGT...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CAA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGAATTGGTGTGCTTCTaGACGACTTGCTGCTGCTTT +
Preference number: 3 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRELVCF*TTCCCF
Trigger: AAAGCAGCAGCAAGTCGTCAAGAAGCACACCAATTC...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR GCA 72 bp TTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTTaGATCAGTGGACTTTTGTGTCTGAAGTTCCTCTTG +
Preference number: 3 (lower is better)
Translates to: FHSFLSGLASPI*ISGLLCLKFLL
Trigger: CAAGAGGAACTTCAGACACAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR CCA 72 bp ACTTTTGTGTCTGAAGTTCCTCTTGGAAGGCATAACTaGGGGGACTTTGCCTTCTTTCCCAAATGGATGGTG +
Preference number: 3 (lower is better)
Translates to: TFVSEVPLGRHN*GDFAFFPKWMV
Trigger: CACCATCCATTTGGGAAAGAAGGCAAAGTCCCCCCAGTTATGCCTTCCAAGAGGAACTTCAGACACAAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR CCA 72 bp TTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTaGACTTTTGTGTCTGAAGTTCCTCTTGGAAGGCAT +
Preference number: 3 (lower is better)
Translates to: FPLWTRQSNLHQ*TFVSEVPLGRH
Trigger: ATGCCTTCCAAGAGGAACTTCAGACACAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CAA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGTCTTGTGGGTTAGAATaGGTGTGCTTCTTGACGACT +
Preference number: 3 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRSCGLE*VCFLTT
Trigger: AGTCGTCAAGAAGCACACCAATTCTAACCCACAAGA...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CAA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGTACTTGTGTATTTCATaGGGGGAAACGCCCATCTTT +
Preference number: 3 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRYLCIS*GETPIF
Trigger: AAAGATGGGCGTTTCCCCCAATGAAATACACAAGTA...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CAA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGTCCAGGCTTCCCCTATaGTTTTGCTTTCACGTATTA +
Preference number: 3 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRSRLPL*FCFHVL
Trigger: TAATACGTGAAAGCAAAACAATAGGGGAAGCCTGGA...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CAA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCATCCAACTTATATTaGGTACAAATGCCACAGATG +
Preference number: 3 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRASNLY*VQMPQM
Trigger: CATCTGTGGCATTTGTACCAAATATAAGTTGGATGC...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR TCA 72 bp GTGATTTCTTTTCAGTATTCCATTGGATCCTTAGGGTaGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: VISFQYSIGSLG*MCVCVCVCVCV
Trigger: CACACACACACACACACACACACACACACACATTCACCCTAAGGATCCAATGGAATACTGAAAAGAAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR CCA 72 bp CTTATATTTGGTACAAATGCCACAGATGGAATCTTGTaGGTTAGAATTGGTGTGCTTCTTGACGACTTGCTG +
Preference number: 3 (lower is better)
Translates to: LIFGTNATDGIL*VRIGVLLDDLL
Trigger: CAGCAAGTCGTCAAGAAGCACACCAATTCTAACCCACAAGATTCCATCTGTGGCATTTGTACCAAATATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR-3UTR CAA 90 bp GTAAAGTTTTGGGTTGTGACATTTTGGTTGCTCCTTTCTATGAAATCTGAGTCAGCTTCCCCTATTGTTTaGCTTTCACGTATTACCGTT +
Preference number: 3 (lower is better)
Translates to: VKFWVVTFWLLLSMKSESASPIV*LSRITV
Trigger: AACGGTAATACGTGAAAGCAAAACAATAGGGGAAGC...TGACTCAGATTTCATAGAAAGGAGCAACCAAAATGTCACAACCCAAAACTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR TCA 72 bp GCATGCTTGAGGTGCTCAATTCAAATAATGTTGGACTaGGAGTTAAAATACTTGTTGACTGAACAGGATTGC +
Preference number: 3 (lower is better)
Translates to: ACLRCSIQIMLD*ELKYLLTEQDC
Trigger: GCAATCCTGTTCAGTCAACAAGTATTTTAACTCTCAGTCCAACATTATTTGAATTGAGCACCTCAAGCATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR CCA 72 bp GAAGCAAAGCTTGTAAAGTTTTGGGTTGTGACATTTTaGTTGCTCCTTTCTATGAAATCTGAGTCATTCTGC +
Preference number: 3 (lower is better)
Translates to: EAKLVKFWVVTF*LLLSMKSESFC
Trigger: GCAGAATGACTCAGATTTCATAGAAAGGAGCAACCAAAATGTCACAACCCAAAACTTTACAAGCTTTGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR GCA 72 bp CAGGCATGGGAAATTTCTTGTTGTGATGGAAGTTTTTaGCTTTCAACTGGAAACTCTAGTCAAGCATATTTT +
Preference number: 3 (lower is better)
Translates to: QAWEISCCDGSF*LSTGNSSQAYF
Trigger: AAAATATGCTTGACTAGAGTTTCCAGTTGAAAGGCAAAAACTTCCATCACAACAAGAAATTTCCCATGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR CCA 72 bp GTCAAGTACTTTCTTAAAGAAACAATAGCACCACATTaGCATAGCTGGCCAAACAATAAATGGGAAAGCAAA +
Preference number: 3 (lower is better)
Translates to: VKYFLKETIAPH*HSWPNNKWESK
Trigger: TTTGCTTTCCCATTTATTGTTTGGCCAGCTATGCCAATGTGGTGCTATTGTTTCTTTAAGAAAGTACTTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCTCCACGATGCCTGTCTaGGGCGCCCTCCGACTGCTG +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVSTMPV*GALRLL
Trigger: CAGCAGTCGGAGGGCGCCTCAGACAGGCATCGTGGA...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR GCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCGAGGCGCCCTCCGACTaGTGGAGCCATACCCTGTGG +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVEAPSD*WSHTLW
Trigger: CCACAGGGTATGGCTCCAGCAGTCGGAGGGCGCCTC...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR CCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCGCGCCCTCCGACTGCTaGAGCCATACCCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVAPSDC*SHTLWA
Trigger: AGCCCACAGGGTATGGCTCCAGCAGTCGGAGGGCGC...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR TCA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTATCCACGATGCCTGTCTaGGGCGCCCTCCGACTGCTG +
Preference number: 4 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVSTMPV*GALRLL
Trigger: CAGCAGTCGGAGGGCGCCTCAGACAGGCATCGTGGA...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCACGGACAGAGCGAGCTaGCTTGGCAGGCTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVTDRAS*LGRLEG
Trigger: CCCCTCAAGCCTGCCAAGTCAGCTCGCTCTGTCCGT...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR CCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCATGTCGGTGTGGCGCTaGGCACGGACAGAGCGAGCT +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVMSVWR*ARTERA
Trigger: AGCTCGCTCTGTCCGTGCCCAGCGCCACACCGACAT...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR CCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCTTGGGCATGTCGGTGTaGCGCTGGGCACGGACAGAG +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVLGMSV*RWARTE
Trigger: CTCTGTCCGTGCCCAGCGCCACACCGACATGCCCAA...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR GCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCAGCACTCATCCACGATaGCTGTCTGAGGCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVSTHPR*LSEAPS
Trigger: GGAGGGCGCCTCAGACAGGCATCGTGGATGAGTGCT...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR GCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCGGCAGGCTTGAGGGGTaGGCAATACATCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVGRLEG*AIHLQP
Trigger: AGGCTGGAGATGTATTGCGCACCCCTCAAGCCTGCC...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR CCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCCTTCCTTCTGGGTCTTaGGCATGTCGGTGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVLPSGS*ACRCGA
Trigger: AGCGCCACACCGACATGCCCAAGACCCAGAAGGAAG...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337514.11
ENST00000644491.1
CDS-3UTR TCA 90 bp CACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTGCTCCACGATGCCTGTCTaGGGCGCCCTCCGACTGCTG +
Preference number: 4 (lower is better)
Translates to: HSSLLRRVFLHPVVLVSCSTMPV*GALRLL
Trigger: CAGCAGTCGGAGGGCGCCTCAGACAGGCATCGTGGA...GCAGGAAACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS-3UTR TCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCCTGACTTGGCAGGCTTaGGGGGTGCGCAATACATCT +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVLTWQA*GVRNTS
Trigger: AGATGTATTGCGCACCCCTCAAGCCTGCCAAGTCAG...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR GCA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTACCAGGAGGTGGAGGTTaGAGTGAGCCGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVPGGGG*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAACCTCCACCTCCTGG...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCGACAAGGTTGCTGAATaGATGGCTCCAGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVDKVAE*MAPAAK
Trigger: CTTGGCTGCTGGAGCCATTCATTCAGCAACCTTGTC...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp TTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGGAGGCGCCCTCCGACTaGTGGAGCCATACCCTGTGG +
Preference number: 4 (lower is better)
Translates to: FHSFLSGLASPICISGLLEAPSD*WSHTLW
Trigger: CCACAGGGTATGGCTCCAGCAGTCGGAGGGCGCCTC...CAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp GCATGTCACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTGAGGCGCCCTCCGACTaGTGGAGCCATACCCTGTGG +
Preference number: 4 (lower is better)
Translates to: ACHSSLLRRVFLHPVVLVEAPSD*WSHTLW
Trigger: CCACAGGGTATGGCTCCAGCAGTCGGAGGGCGCCTC...AACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTGACATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS-3UTR GCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCCAGAGCAAAGGATCCTaGGGTGGCATGTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVQSKGS*GGMSLF
Trigger: GAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTG...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR CCA 90 bp TCACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTGGCGCCCTCCGACTGCTaGAGCCATACCCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SLFTPQEGLPTSCSSCFLAPSDC*SHTLWA
Trigger: AGCCCACAGGGTATGGCTCCAGCAGTCGGAGGGCGC...CAGGAAACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS-3UTR CCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCCAAAGGATCCTGCGGTaGCATGTCACTCTTCACTCC +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVQRILR*HVTLHS
Trigger: GGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTG...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR TCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCACCCTGTGGGCTTGTTaGAATAAAAGCCCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVTLWAC*NKSPCL
Trigger: GAGACAGGGGCTTTTATTTCAACAAGCCCACAGGGT...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR TCA 90 bp TCACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTGACGGACAGAGCGAGCTaGCTTGGCAGGCTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLFTPQEGLPTSCSSCFLTDRAS*LGRLEG
Trigger: CCCCTCAAGCCTGCCAAGTCAGCTCGCTCTGTCCGT...CAGGAAACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS-3UTR TCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCACTTGCTGCTGCTTTTaGGGAGGCCAAATTCGGCAA +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVTCCCF*GGQIRQ
Trigger: TTGCCGAATTTGGCCTCCTCAAAAGCAGCAGCAAGT...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp CACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTGCAGCACTCATCCACGATaGCTGTCTGAGGCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: HSSLLRRVFLHPVVLVSCSTHPR*LSEAPS
Trigger: GGAGGGCGCCTCAGACAGGCATCGTGGATGAGTGCT...GCAGGAAACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS-3UTR CCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCGATGCGAGGAGGACATaGTGTGCATCTTCACCTTCA +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVDARRT*CASSPS
Trigger: TGAAGGTGAAGATGCACACCATGTCCTCCTCGCATC...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR CCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCGCCCTCCGACTGCTaGAGCCATACCCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRAPSDC*SHTLWA
Trigger: AGCCCACAGGGTATGGCTCCAGCAGTCGGAGGGCGC...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp AGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGTGTCTGTTGGGCATGTCGGTGTaGCGCTGGGCACGGACAGAG +
Preference number: 4 (lower is better)
Translates to: SFLSGLASPICISGLLCLLGMSV*RWARTE
Trigger: CTCTGTCCGTGCCCAGCGCCACACCGACATGCCCAA...CAGACACAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp TCACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTGTTGGGCATGTCGGTGTaGCGCTGGGCACGGACAGAG +
Preference number: 4 (lower is better)
Translates to: SLFTPQEGLPTSCSSCFLLGMSV*RWARTE
Trigger: CTCTGTCCGTGCCCAGCGCCACACCGACATGCCCAA...CAGGAAACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS-3UTR TCA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTAACCCTGTGGGCTTGTTaGAATAAAAGCCCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVTLWAC*NKSPCL
Trigger: GAGACAGGGGCTTTTATTTCAACAAGCCCACAGGGT...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCTTAACAGGTAACTCGTaGAGAGCAAAGGATCCTGCG +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVLTGNS*RAKDPA
Trigger: CGCAGGATCCTTTGCTCTGCACGAGTTACCTGTTAA...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR GCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCGGGTTAGAATTGGTGTaGTTCTTGACGACTTGCTGC +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVGLELV*FLTTCC
Trigger: GCAGCAAGTCGTCAAGAAGCACACCAATTCTAACCC...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCAAATGTACTTCCTTCTaGGTCTTGGGCATGTCGGTG +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVKCTSF*VLGMSV
Trigger: CACCGACATGCCCAAGACCCAGAAGGAAGTACATTT...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337514.11
ENST00000644491.1
CDS-3UTR GCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCGAGGAGGACATGGTGTaGATCTTCACCTTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVEEDMV*IFTFKK
Trigger: TTTCTTGAAGGTGAAGATGCACACCATGTCCTCCTC...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR GCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGAGCACTCATCCACGATaGCTGTCTGAGGCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRSTHPR*LSEAPS
Trigger: GGAGGGCGCCTCAGACAGGCATCGTGGATGAGTGCT...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp TCACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTGGGCAGGCTTGAGGGGTaGGCAATACATCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLFTPQEGLPTSCSSCFLGRLEG*AIHLQP
Trigger: AGGCTGGAGATGTATTGCGCACCCCTCAAGCCTGCC...CAGGAAACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS-3UTR GCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCGTAGTTCTTGTTTCCTaGACTCCCTCTACTTGCGTT +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVVVLVS*TPSTCV
Trigger: AACGCAAGTAGAGGGAGTGCAGGAAACAAGAACTAC...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR CCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCCTTCCTTCTGGGTCTTaGGCATGTCGGTGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGLPSGS*ACRCGA
Trigger: AGCGCCACACCGACATGCCCAAGACCCAGAAGGAAG...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCATATCCCTAGAAGAGTaGATTCTGATGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVISLEE*ILMESC
Trigger: GCAGCTCTCCATCAGAATCCACTCTTCTAGGGATAT...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp TTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGGCAACTCAAGCGCCCTaGTGTTGCACCCTTACAGCA +
Preference number: 4 (lower is better)
Translates to: FHSFLSGLASPICISGLLATQAP*CCTLTA
Trigger: TGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGC...CAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCTTCACTGACAAGAACTaGGATGTCAGGAGCATTCAA +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVFTDKN*DVRSIQ
Trigger: TTGAATGCTCCTGACATCTCAGTTCTTGTCAGTGAA...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCGGTTGCTCCTTTCTATaGAATCTGAGTCATTCTGCT +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVGCSFL*NLSHSA
Trigger: AGCAGAATGACTCAGATTTCATAGAAAGGAGCAACC...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTAATTGGATCCTTAGGGTaGATGTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVIGSLG*MCVCVC
Trigger: ACACACACACACACACATTCACCCTAAGGATCCAAT...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGGCAGGCTTGAGGGGTaGGCAATACATCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRGRLEG*AIHLQP
Trigger: AGGCTGGAGATGTATTGCGCACCCCTCAAGCCTGCC...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCTGCACTCCCTCTACTTaGGTTCTTCAAATGTACTTC +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVCTPST*VLQMYF
Trigger: GAAGTACATTTGAAGAACGCAAGTAGAGGGAGTGCA...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR CCA 90 bp GCATGTCACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTGATACTTCTGGGTCTTaGGCATGTCGGTGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: ACHSSLLRRVFLHPVVLVDTSGS*ACRCGA
Trigger: AGCGCCACACCGACATGCCCAAGACCCAGAAGTATC...AACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTGACATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS-3UTR CCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCACAATAGCACCACATTaGCATAGCTGGCCAAACAAT +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVTIAPH*HSWPNN
Trigger: ATTGTTTGGCCAGCTATGCCAATGTGGTGCTATTGT...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCACAGTGGTGAGTCCATaGCACAGCTGGCAGATGTTC +
Preference number: 4 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGTVVSP*HSWQMF
Trigger: GAACATCTGCCAGCTGTGTCATGGACTCACCACTGT...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGAAGGTCACACAGTGGTaGGTCCATGACACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRKVTQW*VHDTAG
Trigger: GCCAGCTGTGTCATGGACTCACCACTGTGTGACCTT...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTAAAAGATTCTTTCTTCTaGGGAGAGCCAAACAGGTTC +
Preference number: 4 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVKDSFF*GEPNRF
Trigger: GAACCTGTTTGGCTCTCCTCAGAAGAAAGAATCTTT...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTATGCACTCCCTCTACTTaGGTTCTTCAAATGTACTTC +
Preference number: 4 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVCTPST*VLQMYF
Trigger: GAAGTACATTTGAAGAACGCAAGTAGAGGGAGTGCA...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCATGGGGCCTTCTTTTTaGATATATTCAGAGATCCAG +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVMGPSF*IYSEIQ
Trigger: CTGGATCTCTGAATATATGCAAAAAGAAGGCCCCAT...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp CACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTGCGATGCGAGGAGGACATaGTGTGCATCTTCACCTTCA +
Preference number: 4 (lower is better)
Translates to: HSSLLRRVFLHPVVLVSCDARRT*CASSPS
Trigger: TGAAGGTGAAGATGCACACCATGTCCTCCTCGCATC...GCAGGAAACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS-3UTR CCA 90 bp GCATGTCACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTCAAAGGATCCTGCGGTaGCATGTCACTCTTCACTCC +
Preference number: 4 (lower is better)
Translates to: ACHSSLLRRVFLHPVVLVQRILR*HVTLHS
Trigger: GGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTG...AACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTGACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS-3UTR CCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCACTTGTGTATTTCATTaGGGGAAACGCCCATCTTTT +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVTCVFH*GKRPSF
Trigger: AAAAGATGGGCGTTTCCCCCAATGAAATACACAAGT...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR CCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCACAGATGGAATCTTGTaGGTTAGAATTGGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVTDGIL*VRIGVL
Trigger: AAGCACACCAATTCTAACCCACAAGATTCCATCTGT...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCAGTTGGCCAGTTATTTaGATAGCTTCACTGACAAGA +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVSWPVI*IASLTR
Trigger: TCTTGTCAGTGAAGCTATCCAAATAACTGGCCAACT...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCAAGGATTCTCAAGGGTaGACAGGCTTTTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVKDSQG*TGFLFV
Trigger: AACAAACAAAAAGCCTGTCCACCCTTGAGAATCCTT...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCAAAGTTGAAAGGTGGTaGTGGCTAGATAGACCTAAT +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVKVERW*WLDRPN
Trigger: ATTAGGTCTATCTAGCCACCACCACCTTTCAACTTT...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp GCATGTCACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTACCCTGTGGGCTTGTTaGAATAAAAGCCCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: ACHSSLLRRVFLHPVVLVTLWAC*NKSPCL
Trigger: GAGACAGGGGCTTTTATTTCAACAAGCCCACAGGGT...AACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTGACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS-3UTR TCA 90 bp TTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGCTTAGACAAGGTTGCTaGATGAATGGCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FHSFLSGLASPICISGLLLRQGC*MNGSSS
Trigger: GCTGCTGGAGCCATTCATTCAGCAACCTTGTCTAAG...CAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCGGAAATTTCTTGTTGTaGTGGAAGTTTTTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVGNFLL*WKFLPF
Trigger: GAAAGGCAAAAACTTCCATCACAACAAGAAATTTCC...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCACCAGTGGACTTTCTTaGTACCAATTTTCAGTTGAA +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVTSGLS*YQFSVE
Trigger: TTCAACTGAAAATTGGTATCAAGAAAGTCCACTGGT...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTATCCTTGGGGGATTTTTaGCTGTGGATAGAATTAAGT +
Preference number: 4 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVSLGDF*LWIELS
Trigger: ACTTAATTCTATCCACAGTCAAAAATCCCCCAAGGA...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTATGGTGGAAAGCCATGTaGTTTGAATGGAAAGATTCT +
Preference number: 4 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVWWKAM*FEWKDS
Trigger: AGAATCTTTCCATTCAAATCACATGGCTTTCCACCA...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGTTTGCTATGAGTTGGTaGGTGGGGTCAATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRFAMSW*VGSMGG
Trigger: GCCACCCATTGACCCCACTCACCAACTCATAGCAAA...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp CACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTGCTTAACAGGTAACTCGTaGAGAGCAAAGGATCCTGCG +
Preference number: 4 (lower is better)
Translates to: HSSLLRRVFLHPVVLVSCLTGNS*RAKDPA
Trigger: CGCAGGATCCTTTGCTCTGCACGAGTTACCTGTTAA...GCAGGAAACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS-3UTR GCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCTGTGATGGAAGTTTTTaGCTTTCAACTGGAAACTCT +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVCDGSF*LSTGNS
Trigger: AGAGTTTCCAGTTGAAAGGCAAAAACTTCCATCACA...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCCTGACTTCCAGGGTTTaGATCAATTTGTTTTCTAGT +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVLTSRV*INLFSS
Trigger: ACTAGAAAACAAATTGATGCAAACCCTGGAAGTCAG...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCCAGCACTTAAATAATTaGGTTGGAAGACTGCTGATT +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVQHLNN*VGRLLI
Trigger: AATCAGCAGTCTTCCAACCCAATTATTTAAGTGCTG...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR CCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGACACCCATGCATTTGTaGCTCTTGAGAGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRTPMHL*LLRGRD
Trigger: GTCCCTGCCTCTCAAGAGCCACAAATGCATGGGTGT...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCCCACAGTTTCCTCTCTaGACTCGCCAGTCCAATTTG +
Preference number: 4 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGPQFPL*TRQSNL
Trigger: CAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGG...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCCAGATCTGGACTTTATaGTCTTTGCAAGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGQIWTL*SLQGRG
Trigger: GCCCCTCCCTTGCAAAGACCATAAAGTCCAGATCTG...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGTTAAGAGGGAACACATaGGCAGGGTGTGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRLRGNT*AGCGGS
Trigger: TGAGCCACCACACCCTGCCCATGTGTTCCCTCTTAA...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTAGACAGATGTAACGAATaGCCAGTCATTATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVDRCNE*PVIIFW
Trigger: CCAGAAAATAATGACTGGCCATTCGTTACATCTGTC...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTACTAATGAGAAAATCTTaGTCTGCAGATAGGGATCAT +
Preference number: 4 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVLMRKS*SADRDH
Trigger: ATGATCCCTATCTGCAGATCAAGATTTTCTCATTAG...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTAGTGACTAGAAAGATCTaGATGCTGGATAATTCATTG +
Preference number: 4 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVVTRKI*MLDNSL
Trigger: CAATGAATTATCCAGCATTCAGATCTTTCTAGTCAC...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCGAAGTGACTTTGCTATaGGTTGGTGAGTGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGEVTLL*VGEWGQ
Trigger: TTGACCCCACTCACCAACTCATAGCAAAGTCACTTC...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp AGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGTGTCTGTGCGCAGGCTCTATCTaGTCTGAATTTAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: SFLSGLASPICISGLLCLCAGSI*SEFSSD
Trigger: GTCACTGCTAAATTCAGAGCAGATAGAGCCTGCGCA...CAGACACAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGATGCGAGGAGGACATaGTGTGCATCTTCACCTTCA +
Preference number: 4 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRDARRT*CASSPS
Trigger: TGAAGGTGAAGATGCACACCATGTCCTCCTCGCATC...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp TCACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTGGTTCTTGTTGGTAGATaGGGGCTGATACTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SLFTPQEGLPTSCSSCFLVLVGR*GLILLG
Trigger: ACCCAGAAGTATCAGCCCCCATCTACCAACAAGAAC...CAGGAAACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS-3UTR CCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCAAATGTACTTCCTTCTaGGTCTTGGGCATGTCGGTG +
Preference number: 4 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGKCTSF*VLGMSV
Trigger: CACCGACATGCCCAAGACCCAGAAGGAAGTACATTT...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp AGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGTGTCTGCTTGGAAGGCATAACTaGGGGGACTTTGCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SFLSGLASPICISGLLCLLGRHN*GDFAFF
Trigger: AAAGAAGGCAAAGTCCCCCCAGTTATGCCTTCCAAG...CAGACACAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCCTTTTAACAACTAGTTaGCCAGTTATTTGGATAGCT +
Preference number: 4 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVLLTTS*PVIWIA
Trigger: AGCTATCCAAATAACTGGCCAACTAGTTGTTAAAAG...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCCAGAACCTGTATGTCTaGAAAACAGGCAGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGQNLYV*KTGRGQ
Trigger: TTGCCCTCTGCCTGTTTTCCAGACATACAGGTTCTG...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp TTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGAGGACTTTATTCCATTaGGCAGGCTCTATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: FHSFLSGLASPICISGLLRTLFH*AGSICS
Trigger: AGAGCAGATAGAGCCTGCGCAATGGAATAAAGTCCT...CAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp TCACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTGGAGGAGGACATGGTGTaGATCTTCACCTTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: SLFTPQEGLPTSCSSCFLEEDMV*IFTFKK
Trigger: TTTCTTGAAGGTGAAGATGCACACCATGTCCTCCTC...CAGGAAACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS-3UTR GCA 90 bp TCACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTGGTAGTTCTTGTTTCCTaGACTCCCTCTACTTGCGTT +
Preference number: 4 (lower is better)
Translates to: SLFTPQEGLPTSCSSCFLVVLVS*TPSTCV
Trigger: AACGCAAGTAGAGGGAGTGCAGGAAACAAGAACTAC...CAGGAAACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS-3UTR CCA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTAATGCCTAAAAATGATTaGCCTCAAAGTTGCAACTAT +
Preference number: 4 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVMPKND*PQSCNY
Trigger: ATAGTTGCAACTTTGAGGCCAATCATTTTTAGGCAT...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCAAAGAAGTGCCATCTTaGGAAGAGGAGTCCAGTATC +
Preference number: 4 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGKEVPS*EEESSI
Trigger: GATACTGGACTCCTCTTCCCAAGATGGCACTTCTTT...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp AGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGTGTCTGTTCAGCTTTCCTCCTTaGGGGATTTTTGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: SFLSGLASPICISGLLCLFSFPP*GIFDCG
Trigger: TCCACAGTCAAAAATCCCCCAAGGAGGAAAGCTGAA...CAGACACAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCGTTGAAAGGTGGTGGTaGCTAGATAGACCTAATGCT +
Preference number: 4 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGVERWW*LDRPNA
Trigger: AGCATTAGGTCTATCTAGCCACCACCACCTTTCAAC...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR CAA 72 bp GCCACAGAGCATGAGATGGTTTCATCTACACAAACATaGACGTTCCAAGGAGAGGAAGGATTCTCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: ATEHEMVSSTQT*TFQGEEGFSRV
Trigger: CACCCTTGAGAATCCTTCCTCTCCTTGGAACGTCAATGTTTGTGTAGATGAAACCATCTCATGCTCTGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCAGAGATGGGAGATGTTaGGAGCAATGTCACATTTCA +
Preference number: 4 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGRDGRC*EQCHIS
Trigger: TGAAATGTGACATTGCTCTCAACATCTCCCATCTCT...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp TTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGTTTGAGATGTCTGGGTaGAGGGAGAATGTCTTCTAT +
Preference number: 4 (lower is better)
Translates to: FHSFLSGLASPICISGLLFEMSG*RENVFY
Trigger: ATAGAAGACATTCTCCCTTCACCCAGACATCTCAAA...CAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp TCACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTGTGCACTCCCTCTACTTaGGTTCTTCAAATGTACTTC +
Preference number: 4 (lower is better)
Translates to: SLFTPQEGLPTSCSSCFLCTPST*VLQMYF
Trigger: GAAGTACATTTGAAGAACGCAAGTAGAGGGAGTGCA...CAGGAAACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392904.5
3UTR CAA 72 bp ATCTTGTGGGTTAGAATTGGTGTGCTTCTTGACGACTaGCTGCTGCTTTTGAGGAGGCCAAATTCGGCAAAT +
Preference number: 4 (lower is better)
Translates to: ILWVRIGVLLDD*LLLLRRPNSAN
Trigger: ATTTGCCGAATTTGGCCTCCTCAAAAGCAGCAGCAAGTCGTCAAGAAGCACACCAATTCTAACCCACAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR CAA 72 bp ATTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTaGCATCAGTGGACTTTTGTGTCTGAAGTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: IPQFPLWTRQSN*HQWTFVSEVPL
Trigger: AAGAGGAACTTCAGACACAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp AGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGTGTCTGGAGAGAACAGAAATTTaGCCTAAGTATCCAGTATGG +
Preference number: 4 (lower is better)
Translates to: SFLSGLASPICISGLLCLERTEI*PKYPVW
Trigger: CCATACTGGATACTTAGGTCAAATTTCTGTTCTCTC...CAGACACAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCATTCTGATGGAGAGCTaGATTAACTTTTTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGILMES*INFFRG
Trigger: TCCCCTGAAAAAGTTAATGCAGCTCTCCATCAGAAT...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp GCATGTCACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTACTTGTGTATTTCATTaGGGGAAACGCCCATCTTTT +
Preference number: 4 (lower is better)
Translates to: ACHSSLLRRVFLHPVVLVTCVFH*GKRPSF
Trigger: AAAAGATGGGCGTTTCCCCCAATGAAATACACAAGT...AACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTGACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS-3UTR CCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGTCTTTCCCAAATGGATaGTGTTTTCAGTACCCTTCC +
Preference number: 4 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRSFPNG*CFQYPS
Trigger: GGAAGGGTACTGAAAACACCATCCATTTGGGAAAGA...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCCCACAGAGCATGAGATaGTTTCATCTACACAAACAT +
Preference number: 4 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGPQSMR*FHLHKH
Trigger: ATGTTTGTGTAGATGAAACCATCTCATGCTCTGTGG...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCTGTTCATTTCTTCCATaGGAAAAAGAAACCAGGACT +
Preference number: 4 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGCSFLP*EKETRT
Trigger: AGTCCTGGTTTCTTTTTCTCATGGAAGAAATGAACA...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp TTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGATTTTCTCCACTTGCTaGATATCTGTTTTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: FHSFLSGLASPICISGLLIFSTC*ISVLEQ
Trigger: CTGCTCTAAAACAGATATTCAGCAAGTGGAGAAAAT...CAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp TTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGAAGATAGTTGAAGAATaGGGAGAGAAGGATCATGTT +
Preference number: 4 (lower is better)
Translates to: FHSFLSGLASPICISGLLKIVEE*GEKDHV
Trigger: AACATGATCCTTCTCTCCTCATTCTTCAACTATCTT...CAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGTTTACCAAAAAGATCTaGCATGGTATTTGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRFTKKI*HGIWGL
Trigger: AAGGCCCCAAATACCATGTCAGATCTTTTTGGTAAA...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp GTAAAGTTTTGGGTTGTGACATTTTGGTTGCTCCTTTCTATGAAATCTGAGTCACAGAGCAAAGGATCCTaGGGTGGCATGTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: VKFWVVTFWLLLSMKSESQSKGS*GGMSLF
Trigger: GAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTG...TGACTCAGATTTCATAGAAAGGAGCAACCAAAATGTCACAACCCAAAACTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp AGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGTGTCTGAAATTCCTAGCCTTCTaGTTTTTCCATTCCACAGTT +
Preference number: 4 (lower is better)
Translates to: SFLSGLASPICISGLLCLKFLAF*FFHSTV
Trigger: AACTGTGGAATGGAAAAAGCAGAAGGCTAGGAATTT...CAGACACAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp TTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGAGAAATAAAAAGAAGTaGCATCTTGGGAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: FHSFLSGLASPICISGLLRNKKK*HLGKRS
Trigger: ACTCCTCTTCCCAAGATGGCACTTCTTTTTATTTCT...CAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp GTAAAGTTTTGGGTTGTGACATTTTGGTTGCTCCTTTCTATGAAATCTGAGTCATTTCAGAGTCCCTCCTaGAGTGTGTTTAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: VKFWVVTFWLLLSMKSESFQSPS*SVFSSG
Trigger: CCCGCTGCTAAACACACTGCAGGAGGGACTCTGAAA...TGACTCAGATTTCATAGAAAGGAGCAACCAAAATGTCACAACCCAAAACTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp TCACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTGCAGCACTTAAATAATTaGGTTGGAAGACTGCTGATT +
Preference number: 4 (lower is better)
Translates to: SLFTPQEGLPTSCSSCFLQHLNN*VGRLLI
Trigger: AATCAGCAGTCTTCCAACCCAATTATTTAAGTGCTG...CAGGAAACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS-3UTR CCA 90 bp AGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGTGTCTGCATCCAACTTATATTTaGTACAAATGCCACAGATGG +
Preference number: 4 (lower is better)
Translates to: SFLSGLASPICISGLLCLHPTYI*YKCHRW
Trigger: CCATCTGTGGCATTTGTACCAAATATAAGTTGGATG...CAGACACAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp TTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGTTTTCAGTATTCCATTaGATCCTTAGGGTGAATGTG +
Preference number: 4 (lower is better)
Translates to: FHSFLSGLASPICISGLLFSVFH*ILRVNV
Trigger: CACATTCACCCTAAGGATCCAATGGAATACTGAAAA...CAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp TTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGTCTAGAGTTTCAGCTTaGTCAGCCCTCTATAAAATT +
Preference number: 4 (lower is better)
Translates to: FHSFLSGLASPICISGLLSRVSA*SALYKI
Trigger: AATTTTATAGAGGGCTGACCAAGCTGAAACTCTAGA...CAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp TTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGCAAAAAGATCTGACATaGTATTTGGGGCCTTTATGT +
Preference number: 4 (lower is better)
Translates to: FHSFLSGLASPICISGLLQKDLT*YLGPLC
Trigger: ACATAAAGGCCCCAAATACCATGTCAGATCTTTTTG...CAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337514.11
3UTR CAA 72 bp ACACACTGGGGACAAGAAATAAAAAGAAGTGCCATCTaGGGAAGAGGAGTCCAGTATCTTATTCCACAGAAC +
Preference number: 4 (lower is better)
Translates to: THWGQEIKRSAI*GRGVQYLIPQN
Trigger: GTTCTGTGGAATAAGATACTGGACTCCTCTTCCCAAGATGGCACTTCTTTTTATTTCTTGTCCCCAGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGTCACATTTCAATTTTaGGGACTTTATTCCATTGCG +
Preference number: 4 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRVTFQF*GLYSIA
Trigger: CGCAATGGAATAAAGTCCTCAAAATTGAAATGTGAC...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGTATATAGTAATCAACTaGCTTCCAGGGTTTGCATCA +
Preference number: 4 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRYIVIN*LPGFAS
Trigger: TGATGCAAACCCTGGAAGTCAGTTGATTACTATATA...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp GTAAAGTTTTGGGTTGTGACATTTTGGTTGCTCCTTTCTATGAAATCTGAGTCAACAAGGTCAGGAGTTTaGGACCAACCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: VKFWVVTFWLLLSMKSESTRSGV*DQPGQH
Trigger: ATGTTGGCCAGGTTGGTCTCAAACTCCTGACCTTGT...TGACTCAGATTTCATAGAAAGGAGCAACCAAAATGTCACAACCCAAAACTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGCTTCCCCTATTGTTTTaGTTTCACGTATTACCGTTT +
Preference number: 4 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRLPLLF*FHVLPF
Trigger: AAACGGTAATACGTGAAAGCAAAACAATAGGGGAAG...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGTGGGTTGTGACATTTTaGTTGCTCCTTTCTATGAAA +
Preference number: 4 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRWVVTF*LLLSMK
Trigger: TTTCATAGAAAGGAGCAACCAAAATGTCACAACCCA...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp GTAAAGTTTTGGGTTGTGACATTTTGGTTGCTCCTTTCTATGAAATCTGAGTCATTAACAGGTAACTCGTaGAGAGCAAAGGATCCTGCG +
Preference number: 4 (lower is better)
Translates to: VKFWVVTFWLLLSMKSESLTGNS*RAKDPA
Trigger: CGCAGGATCCTTTGCTCTGCACGAGTTACCTGTTAA...TGACTCAGATTTCATAGAAAGGAGCAACCAAAATGTCACAACCCAAAACTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGTTGAGCAGTAACATTTaGTTTTGTGTCCTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRLSSNI*FCVLSF
Trigger: AAAAGAGAGGACACAAAACCAAATGTTACTGCTCAA...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp GTAAAGTTTTGGGTTGTGACATTTTGGTTGCTCCTTTCTATGAAATCTGAGTCACATCTACACAAACATTaGCGTTCCAAGGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: VKFWVVTFWLLLSMKSESHLHKH*RSKERK
Trigger: CTTCCTCTCCTTGGAACGTCAATGTTTGTGTAGATG...TGACTCAGATTTCATAGAAAGGAGCAACCAAAATGTCACAACCCAAAACTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp GTAAAGTTTTGGGTTGTGACATTTTGGTTGCTCCTTTCTATGAAATCTGAGTCAGAGGAGGACATGGTGTaGATCTTCACCTTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: VKFWVVTFWLLLSMKSESEEDMV*IFTFKK
Trigger: TTTCTTGAAGGTGAAGATGCACACCATGTCCTCCTC...TGACTCAGATTTCATAGAAAGGAGCAACCAAAATGTCACAACCCAAAACTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp GTAAAGTTTTGGGTTGTGACATTTTGGTTGCTCCTTTCTATGAAATCTGAGTCAGTAGTTCTTGTTTCCTaGACTCCCTCTACTTGCGTT +
Preference number: 4 (lower is better)
Translates to: VKFWVVTFWLLLSMKSESVVLVS*TPSTCV
Trigger: AACGCAAGTAGAGGGAGTGCAGGAAACAAGAACTAC...TGACTCAGATTTCATAGAAAGGAGCAACCAAAATGTCACAACCCAAAACTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp GTAAAGTTTTGGGTTGTGACATTTTGGTTGCTCCTTTCTATGAAATCTGAGTCACTCGCCAGTCCAATTTaGATCAGTGGACTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: VKFWVVTFWLLLSMKSESLASPI*ISGLLC
Trigger: ACACAAAAGTCCACTGATGCAAATTGGACTGGCGAG...TGACTCAGATTTCATAGAAAGGAGCAACCAAAATGTCACAACCCAAAACTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp GTAAAGTTTTGGGTTGTGACATTTTGGTTGCTCCTTTCTATGAAATCTGAGTCAGCCTTCTTTCCCAAATaGATGGTGTTTTCAGTACCC +
Preference number: 4 (lower is better)
Translates to: VKFWVVTFWLLLSMKSESAFFPK*MVFSVP
Trigger: GGGTACTGAAAACACCATCCATTTGGGAAAGAAGGC...TGACTCAGATTTCATAGAAAGGAGCAACCAAAATGTCACAACCCAAAACTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp GTAAAGTTTTGGGTTGTGACATTTTGGTTGCTCCTTTCTATGAAATCTGAGTCAAGTGGGGTCAATGGGTaGCTTGAAAGGGATTTTAGA +
Preference number: 4 (lower is better)
Translates to: VKFWVVTFWLLLSMKSESSGVNG*LERDFR
Trigger: TCTAAAATCCCTTTCAAGCCACCCATTGACCCCACT...TGACTCAGATTTCATAGAAAGGAGCAACCAAAATGTCACAACCCAAAACTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR GCA 90 bp GTAAAGTTTTGGGTTGTGACATTTTGGTTGCTCCTTTCTATGAAATCTGAGTCATTTCATGAGAGCTACTaGTCTTTGAGATGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: VKFWVVTFWLLLSMKSESFHESY*SLRCLG
Trigger: ACCCAGACATCTCAAAGAGCAGTAGCTCTCATGAAA...TGACTCAGATTTCATAGAAAGGAGCAACCAAAATGTCACAACCCAAAACTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR TCA 90 bp GTAAAGTTTTGGGTTGTGACATTTTGGTTGCTCCTTTCTATGAAATCTGAGTCATCATTTTCTAGGCTATaGTGGACTAGTACACTAACC +
Preference number: 4 (lower is better)
Translates to: VKFWVVTFWLLLSMKSESSFSRL*WTSTLT
Trigger: GGTTAGTGTACTAGTCCATCATAGCCTAGAAAATGA...TGACTCAGATTTCATAGAAAGGAGCAACCAAAATGTCACAACCCAAAACTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CCA 90 bp GTAAAGTTTTGGGTTGTGACATTTTGGTTGCTCCTTTCTATGAAATCTGAGTCAACTTGTGTATTTCATTaGGGGAAACGCCCATCTTTT +
Preference number: 4 (lower is better)
Translates to: VKFWVVTFWLLLSMKSESTCVFH*GKRPSF
Trigger: AAAAGATGGGCGTTTCCCCCAATGAAATACACAAGT...TGACTCAGATTTCATAGAAAGGAGCAACCAAAATGTCACAACCCAAAACTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS TCA 90 bp GGTCTTGGGCATGTCGGTGTGGCGCTGGGCACGGACAGAGCGAGCTaGCTTGGCAGGCTTGAGGGGTGCGCAATACATCTCCAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: GLGHVGVALGTDRAS*LGRLEGCAIHLQPP
Trigger: AGGAGGCTGGAGATGTATTGCGCACCCCTCAAGCCTGCCAAGTCAGCTCGCTCTGTCCGTGCCCAGCGCCACACCGACATGCCCAAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307046.8
ENST00000337514.11
ENST00000392904.5
ENST00000392905.7
ENST00000424202.6
ENST00000644491.1
CDS TCA 90 bp CGGTGTGGCGCTGGGCACGGACAGAGCGAGCTGACTTGGCAGGCTTaGGGGGTGCGCAATACATCTCCAGCCTCCTTAGATCACAGCTCC +
Preference number: 5 (lower is better)
Translates to: RCGAGHGQSELTWQA*GVRNTSPASLDHSS
Trigger: GGAGCTGTGATCTAAGGAGGCTGGAGATGTATTGCGCACCCCTCAAGCCTGCCAAGTCAGCTCGCTCTGTCCGTGCCCAGCGCCACACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307046.8
ENST00000337514.11
ENST00000392904.5
ENST00000392905.7
ENST00000424202.6
ENST00000644491.1
CDS GCA 90 bp CCAGCCTCCTTAGATCACAGCTCCGGAAGCAGCACTCATCCACGATaGCTGTCTGAGGCGCCCTCCGACTGCTGGAGCCATACCCTGTGG +
Preference number: 5 (lower is better)
Translates to: PASLDHSSGSSTHPR*LSEAPSDCWSHTLW
Trigger: CCACAGGGTATGGCTCCAGCAGTCGGAGGGCGCCTCAGACAGGCATCGTGGATGAGTGCTGCTTCCGGAGCTGTGATCTAAGGAGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307046.8
ENST00000337514.11
ENST00000392904.5
ENST00000392905.7
ENST00000424202.6
ENST00000644491.1
CDS TCA 90 bp CTTAGATCACAGCTCCGGAAGCAGCACTCATCCACGATGCCTGTCTaGGGCGCCCTCCGACTGCTGGAGCCATACCCTGTGGGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LRSQLRKQHSSTMPV*GALRLLEPYPVGLL
Trigger: CAACAAGCCCACAGGGTATGGCTCCAGCAGTCGGAGGGCGCCTCAGACAGGCATCGTGGATGAGTGCTGCTTCCGGAGCTGTGATCTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307046.8
ENST00000337514.11
ENST00000392904.5
ENST00000392905.7
ENST00000424202.6
ENST00000644491.1
CDS CCA 90 bp TTCAAATGTACTTCCTTCTGGGTCTTGGGCATGTCGGTGTGGCGCTaGGCACGGACAGAGCGAGCTGACTTGGCAGGCTTGAGGGGTGCG +
Preference number: 5 (lower is better)
Translates to: FKCTSFWVLGMSVWR*ARTERADLAGLRGA
Trigger: CGCACCCCTCAAGCCTGCCAAGTCAGCTCGCTCTGTCCGTGCCCAGCGCCACACCGACATGCCCAAGACCCAGAAGGAAGTACATTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000424202.6
ENST00000644491.1
CDS-3UTR CAA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCACAGAGCGAGCTGACTaGGCAGGCTTGAGGGGTGCG +
Preference number: 5 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVTERAD*AGLRGA
Trigger: CGCACCCCTCAAGCCTGCCAAGTCAGCTCGCTCTGT...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS CCA 90 bp GCGTTCTTCAAATGTACTTCCTTCTGGGTCTTGGGCATGTCGGTGTaGCGCTGGGCACGGACAGAGCGAGCTGACTTGGCAGGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: AFFKCTSFWVLGMSV*RWARTERADLAGLR
Trigger: CCTCAAGCCTGCCAAGTCAGCTCGCTCTGTCCGTGCCCAGCGCCACACCGACATGCCCAAGACCCAGAAGGAAGTACATTTGAAGAACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000424202.6
ENST00000644491.1
CDS-3UTR CAA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCACTTCCTTCTGGGTCTaGGGCATGTCGGTGTGGCGC +
Preference number: 5 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVTSFWV*GMSVWR
Trigger: GCGCCACACCGACATGCCCAAGACCCAGAAGGAAGT...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337514.11
ENST00000644491.1
CDS-3UTR CAA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCGCTGACTTGGCAGGCTaGAGGGGTGCGCAATACATC +
Preference number: 5 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVADLAG*RGAQYI
Trigger: GATGTATTGCGCACCCCTCAAGCCTGCCAAGTCAGC...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR CAA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTAACTTCCTTCTGGGTCTaGGGCATGTCGGTGTGGCGC +
Preference number: 5 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVTSFWV*GMSVWR
Trigger: GCGCCACACCGACATGCCCAAGACCCAGAAGGAAGT...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp TTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGACAGAGCGAGCTGACTaGGCAGGCTTGAGGGGTGCG +
Preference number: 5 (lower is better)
Translates to: FHSFLSGLASPICISGLLTERAD*AGLRGA
Trigger: CGCACCCCTCAAGCCTGCCAAGTCAGCTCGCTCTGT...CAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCACTCCAGGACCATTTTaGCAAGGTGCAAATCACTCC +
Preference number: 5 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVTPGPF*QGANHS
Trigger: GGAGTGATTTGCACCTTGCAAAAATGGTCCTGGAGT...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp TCACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTGGCTGACTTGGCAGGCTaGAGGGGTGCGCAATACATC +
Preference number: 5 (lower is better)
Translates to: SLFTPQEGLPTSCSSCFLADLAG*RGAQYI
Trigger: GATGTATTGCGCACCCCTCAAGCCTGCCAAGTCAGC...CAGGAAACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS-3UTR CAA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCCTGCACTCCCTCTACTaGCGTTCTTCAAATGTACTT +
Preference number: 5 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVLHSLY*RSSNVL
Trigger: AAGTACATTTGAAGAACGCAAGTAGAGGGAGTGCAG...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR CAA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTAGAATTGGTGTGCTTCTaGACGACTTGCTGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVELVCF*TTCCCF
Trigger: AAAGCAGCAGCAAGTCGTCAAGAAGCACACCAATTC...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCTGCATCAGTGGACTTTaGTGTCTGAAGTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVCISGL*CLKFLL
Trigger: CAAGAGGAACTTCAGACACAAAAGTCCACTGATGCA...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCTGACTTGGCAGGCTaGAGGGGTGCGCAATACATC +
Preference number: 5 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRADLAG*RGAQYI
Trigger: GATGTATTGCGCACCCCTCAAGCCTGCCAAGTCAGC...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCTACTTGTGTATTTCATaGGGGGAAACGCCCATCTTT +
Preference number: 5 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVYLCIS*GETPIF
Trigger: AAAGATGGGCGTTTCCCCCAATGAAATACACAAGTA...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000644491.1
CDS-3UTR CAA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTATCTTGTGGGTTAGAATaGGTGTGCTTCTTGACGACT +
Preference number: 5 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVSCGLE*VCFLTT
Trigger: AGTCGTCAAGAAGCACACCAATTCTAACCCACAAGA...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp TGCAGAGCAAAGGATCCTGCGGTGGCATGTCACTCTTCACTCCTCAGGAGGGTCGCTTCCCCTATTGTTTaGCTTTCACGTATTACCGTT +
Preference number: 5 (lower is better)
Translates to: CRAKDPAVACHSSLLRRVASPIV*LSRITV
Trigger: AACGGTAATACGTGAAAGCAAAACAATAGGGGAAGC...GACCCTCCTGAGGAGTGAAGAGTGACATGCCACCGCAGGATCCTTTGCTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp AGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGTGTCTGTCAAGCGCCCTGATGTaGCACCCTTACAGCAACCCA +
Preference number: 5 (lower is better)
Translates to: SFLSGLASPICISGLLCLSSALM*HPYSNP
Trigger: TGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGA...CAGACACAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTAAAAAGAAGTGCCATCTaGGGAAGAGGAGTCCAGTAT +
Preference number: 5 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVKRSAI*GRGVQY
Trigger: ATACTGGACTCCTCTTCCCAAGATGGCACTTCTTTT...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp AGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGTGTCTGGACTTGCTGCTGCTTTaGAGGAGGCCAAATTCGGCA +
Preference number: 5 (lower is better)
Translates to: SFLSGLASPICISGLLCLDLLLL*RRPNSA
Trigger: TGCCGAATTTGGCCTCCTCAAAAGCAGCAGCAAGTC...CAGACACAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCGTGCTTCTTGACGACTaGCTGCTGCTTTTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGVLLDD*LLLLRR
Trigger: CCTCCTCAAAAGCAGCAGCAAGTCGTCAAGAAGCAC...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTAGATCTGACATGGTATTaGGGGCCTTTATGTAAACTG +
Preference number: 5 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVDLTWY*GPLCKL
Trigger: CAGTTTACATAAAGGCCCCAAATACCATGTCAGATC...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCGAGGACTTTATTCCATaGCGCAGGCTCTATCTGCTC +
Preference number: 5 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGEDFIP*RRLYLL
Trigger: GAGCAGATAGAGCCTGCGCAATGGAATAAAGTCCTC...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGTCAGTACCCTTCCCCTaGTGTCATCTTTGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRSVPFP*CHLWLQ
Trigger: CTGGAGCCAAAGATGACACAAGGGGAAGGGTACTGA...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTACCCCAAATTCACAATTaGGTGAACAGTACACTACTT +
Preference number: 5 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVPQIHN*VNSTLL
Trigger: AAGTAGTGTACTGTTCACCAAATTGTGAATTTGGGG...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGAGAGCTACTGCTCTTaGAGATGTCTGGGTGAAGGG +
Preference number: 5 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRESYCS*RCLGEG
Trigger: CCCTTCACCCAGACATCTCAAAGAGCAGTAGCTCTC...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS GCA 90 bp TCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTaGACTCCCTCTACTTGCGTTCTTCAAATGTACTTCCTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: SLLRRVFLHPVVLVS*TPSTCVLQMYFLLG
Trigger: ACCCAGAAGGAAGTACATTTGAAGAACGCAAGTAGAGGGAGTGCAGGAAACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000424202.6
ENST00000644491.1
CDS-3UTR CAA 90 bp CACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTGCCTGCACTCCCTCTACTaGCGTTCTTCAAATGTACTT +
Preference number: 5 (lower is better)
Translates to: HSSLLRRVFLHPVVLVSCLHSLY*RSSNVL
Trigger: AAGTACATTTGAAGAACGCAAGTAGAGGGAGTGCAG...GCAGGAAACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS-3UTR CAA 90 bp GCATCTCAGCAACTCAAGCGCCCTGATGTTGCACCCTTACAGCAACCCAGGGTAGTTGTGACATTTTGGTaGCTCCTTTCTATGAAATCT +
Preference number: 5 (lower is better)
Translates to: ASQQLKRPDVAPLQQPRVVVTFW*LLSMKS
Trigger: AGATTTCATAGAAAGGAGCAACCAAAATGTCACAAC...TACCCTGGGTTGCTGTAAGGGTGCAACATCAGGGCGCTTGAGTTGCTGAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp AGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGTGTCTGTGGACTTTATGGTCTTaGCAAGGGAGGGGCATAAAC +
Preference number: 5 (lower is better)
Translates to: SFLSGLASPICISGLLCLWTLWS*QGRGIN
Trigger: GTTTATGCCCCTCCCTTGCAAAGACCATAAAGTCCA...CAGACACAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS GCA 90 bp TCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTaGACTCCCTCTACTTGCGTTCTTCAAATGTACTTCCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: SLLRRVFLHPVVLVS*TPSTCVLQMYFLSF
Trigger: GAAGGAAAGGAAGTACATTTGAAGAACGCAAGTAGAGGGAGTGCAGGAAACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS GCA 90 bp TCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTaGACTCCCTCTACTTGCGTTCTTCAAATGTACTTCCTTTCCACA +
Preference number: 5 (lower is better)
Translates to: SLLRRVFLHPVVLVS*TPSTCVLQMYFLST
Trigger: TGTGGAAAGGAAGTACATTTGAAGAACGCAAGTAGAGGGAGTGCAGGAAACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481539.1
CDS-3UTR CAA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCCTGCACTCCCTCTACTaGCGTTCTTCAAATGTACTT +
Preference number: 5 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGLHSLY*RSSNVL
Trigger: AAGTACATTTGAAGAACGCAAGTAGAGGGAGTGCAG...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGAGAGATGGGAGATGTaGAGAGCAATGTCACATTTC +
Preference number: 5 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRERWEM*RAMSHF
Trigger: GAAATGTGACATTGCTCTCAACATCTCCCATCTCTC...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCTACTTGTGTATTTCATaGGGGGAAACGCCCATCTTT +
Preference number: 5 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGYLCIS*GETPIF
Trigger: AAAGATGGGCGTTTCCCCCAATGAAATACACAAGTA...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp GCATGTCACTCTTCACTCCTCAGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTACTTGTGTATTTCATaGGGGGAAACGCCCATCTTT +
Preference number: 5 (lower is better)
Translates to: ACHSSLLRRVFLHPVVLVYLCIS*GETPIF
Trigger: AAAGATGGGCGTTTCCCCCAATGAAATACACAAGTA...AACAAGAACTACAGGATGTAGGAAGACCCTCCTGAGGAGTGAAGAGTGACATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392904.5
CDS-3UTR CAA 90 bp TTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGTCCAGGCTTCCCCTATaGTTTTGCTTTCACGTATTA +
Preference number: 5 (lower is better)
Translates to: FHSFLSGLASPICISGLLSRLPL*FCFHVL
Trigger: TAATACGTGAAAGCAAAACAATAGGGGAAGCCTGGA...CAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCTCATCTACACAAACATaGACGTTCCAAGGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGSSTQT*TFQGEE
Trigger: TTCCTCTCCTTGGAACGTCAATGTTTGTGTAGATGA...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp TTCCACAGTTTCCTCTCTGGACTCGCCAGTCCAATTTGCATCAGTGGACTTTTGGCATCCAACTTATATTaGGTACAAATGCCACAGATG +
Preference number: 5 (lower is better)
Translates to: FHSFLSGLASPICISGLLASNLY*VQMPQM
Trigger: CATCTGTGGCATTTGTACCAAATATAAGTTGGATGC...CAAAAGTCCACTGATGCAAATTGGACTGGCGAGTCCAGAGAGGAAACTGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCAATGGGGCCTTCTTTTaGCATATATTCAGAGATCCA +
Preference number: 5 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGNGAFF*HIFRDP
Trigger: TGGATCTCTGAATATATGCAAAAAGAAGGCCCCATT...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp GAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGCTTGGGTTGTGACATTTaGGTTGCTCCTTTCTATGAA +
Preference number: 5 (lower is better)
Translates to: ESSILFHRTCMSGKQAEGLGCDI*VAPFYE
Trigger: TTCATAGAAAGGAGCAACCAAAATGTCACAACCCAA...GCCCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp GTAAAGTTTTGGGTTGTGACATTTTGGTTGCTCCTTTCTATGAAATCTGAGTCAACAACACCCATGCATTaGTGGCTCTTGAGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: VKFWVVTFWLLLSMKSESTTPMH*WLLRGR
Trigger: CCTGCCTCTCAAGAGCCACAAATGCATGGGTGTTGT...TGACTCAGATTTCATAGAAAGGAGCAACCAAAATGTCACAACCCAAAACTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGTTATTCTCCATGCTCTaGATCAAGTTCAGAAGATTG +
Preference number: 5 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRLFSML*IKFRRL
Trigger: CAATCTTCTGAACTTGATCAAGAGCATGGAGAATAA...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS-3UTR CAA 90 bp AGGAGTCCAGTATCTTATTCCACAGAACCTGTATGTCTGGAAAACAGGCAGAGGGGAAAGCCATGTGATTaGAATGGAAAGATTCTTTCT +
Preference number: 5 (lower is better)
Translates to: RSPVSYSTEPVCLENRQRGKPCD*NGKILS
Trigger: AGAAAGAATCTTTCCATTCAAATCACATGGCTTTCC...CCTCTGCCTGTTTTCCAGACATACAGGTTCTGTGGAATAAGATACTGGACTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS TCA 90 bp TCCAGAGAGATGGGAGATGTTGAGAGCAATGTCACATTTCAATTTTaGGGACTTTATTCCATTGCGCAGGCTCTATCTGCTCTGAATTTA +
Preference number: 5 (lower is better)
Translates to: SREMGDVESNVTFQF*GLYSIAQALSALNL
Trigger: TAAATTCAGAGCAGATAGAGCCTGCGCAATGGAATAAAGTCCTCAAAATTGAAATGTGACATTGCTCTCAACATCTCCCATCTCTCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307046.8
ENST00000337514.11
ENST00000392905.7
CDS-3UTR CAA 90 bp GTAAAGTTTTGGGTTGTGACATTTTGGTTGCTCCTTTCTATGAAATCTGAGTCAACTCGCCAGTCCAATTaGCATCAGTGGACTTTTGTG +
Preference number: 5 (lower is better)
Translates to: VKFWVVTFWLLLSMKSESTRQSN*HQWTFV
Trigger: CACAAAAGTCCACTGATGCAAATTGGACTGGCGAGT...TGACTCAGATTTCATAGAAAGGAGCAACCAAAATGTCACAACCCAAAACTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337514.11
CDS CCA 90 bp TGCATCTTCACCTTCAAGAAATCACAAAAGCAGCACTTAAATAATTaGGTTGGAAGACTGCTGATTTTTCCCATTGCTTCTGAAGTACAA +
Preference number: 5 (lower is better)
Translates to: CIFTFKKSQKQHLNN*VGRLLIFPIASEVQ
Trigger: TTGTACTTCAGAAGCAATGGGAAAAATCAGCAGTCTTCCAACCCAATTATTTAAGTGCTGCTTTTGTGATTTCTTGAAGGTGAAGATGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000307046.8
ENST00000337514.11
ENST00000392904.5
ENST00000392905.7
ENST00000644491.1
CDS TCA 72 bp CAGCTCCGGAAGCAGCACTCATCCACGATGCCTGTCTaGGGCGCCCTCCGACTGCTGGAGCCATACCCTGTG +
Preference number: 6 (lower is better)
Translates to: QLRKQHSSTMPV*GALRLLEPYPV
Trigger: CACAGGGTATGGCTCCAGCAGTCGGAGGGCGCCTCAGACAGGCATCGTGGATGAGTGCTGCTTCCGGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307046.8
ENST00000337514.11
ENST00000392904.5
ENST00000392905.7
ENST00000424202.6
ENST00000644491.1
CDS TCA 72 bp CATGTCGGTGTGGCGCTGGGCACGGACAGAGCGAGCTaGCTTGGCAGGCTTGAGGGGTGCGCAATACATCTC +
Preference number: 6 (lower is better)
Translates to: HVGVALGTDRAS*LGRLEGCAIHL
Trigger: GAGATGTATTGCGCACCCCTCAAGCCTGCCAAGTCAGCTCGCTCTGTCCGTGCCCAGCGCCACACCGACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307046.8
ENST00000337514.11
ENST00000392904.5
ENST00000392905.7
ENST00000424202.6
ENST00000644491.1
CDS CCA 72 bp ACTTCCTTCTGGGTCTTGGGCATGTCGGTGTGGCGCTaGGCACGGACAGAGCGAGCTGACTTGGCAGGCTTG +
Preference number: 6 (lower is better)
Translates to: TSFWVLGMSVWR*ARTERADLAGL
Trigger: CAAGCCTGCCAAGTCAGCTCGCTCTGTCCGTGCCCAGCGCCACACCGACATGCCCAAGACCCAGAAGGAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000424202.6
ENST00000644491.1
CDS CAA 90 bp TCGGTGTGGCGCTGGGCACGGACAGAGCGAGCTGACTTGGCAGGCTaGAGGGGTGCGCAATACATCTCCAGCCTCCTTAGATCACAGCTC +
Preference number: 6 (lower is better)
Translates to: SVWRWARTERADLAG*RGAQYISSLLRSQL
Trigger: GAGCTGTGATCTAAGGAGGCTGGAGATGTATTGCGCACCCCTCAAGCCTGCCAAGTCAGCTCGCTCTGTCCGTGCCCAGCGCCACACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307046.8
ENST00000337514.11
ENST00000392904.5
ENST00000392905.7
ENST00000424202.6
ENST00000644491.1
CDS CAA 90 bp TTGGGCATGTCGGTGTGGCGCTGGGCACGGACAGAGCGAGCTGACTaGGCAGGCTTGAGGGGTGCGCAATACATCTCCAGCCTCCTTAGA +
Preference number: 6 (lower is better)
Translates to: LGMSVWRWARTERAD*AGLRGAQYISSLLR
Trigger: TCTAAGGAGGCTGGAGATGTATTGCGCACCCCTCAAGCCTGCCAAGTCAGCTCGCTCTGTCCGTGCCCAGCGCCACACCGACATGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307046.8
ENST00000337514.11
ENST00000392904.5
ENST00000392905.7
ENST00000424202.6
ENST00000644491.1
CDS CAA 72 bp CGCTGGGCACGGACAGAGCGAGCTGACTTGGCAGGCTaGAGGGGTGCGCAATACATCTCCAGCCTCCTTAGA +
Preference number: 6 (lower is better)
Translates to: RWARTERADLAG*RGAQYISSLLR
Trigger: TCTAAGGAGGCTGGAGATGTATTGCGCACCCCTCAAGCCTGCCAAGTCAGCTCGCTCTGTCCGTGCCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307046.8
ENST00000337514.11
ENST00000392904.5
ENST00000392905.7
ENST00000424202.6
ENST00000644491.1
CDS TCA 72 bp GCTGGGCACGGACAGAGCGAGCTGACTTGGCAGGCTTaGGGGGTGCGCAATACATCTCCAGCCTCCTTAGAT +
Preference number: 6 (lower is better)
Translates to: AGHGQSELTWQA*GVRNTSPASLD
Trigger: ATCTAAGGAGGCTGGAGATGTATTGCGCACCCCTCAAGCCTGCCAAGTCAGCTCGCTCTGTCCGTGCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307046.8
ENST00000337514.11
ENST00000392904.5
ENST00000392905.7
ENST00000424202.6
ENST00000644491.1
CDS GCA 72 bp TTAGATCACAGCTCCGGAAGCAGCACTCATCCACGATaGCTGTCTGAGGCGCCCTCCGACTGCTGGAGCCAT +
Preference number: 6 (lower is better)
Translates to: LDHSSGSSTHPR*LSEAPSDCWSH
Trigger: ATGGCTCCAGCAGTCGGAGGGCGCCTCAGACAGGCATCGTGGATGAGTGCTGCTTCCGGAGCTGTGATCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307046.8
ENST00000337514.11
ENST00000392904.5
ENST00000392905.7
ENST00000424202.6
ENST00000644491.1
CDS CCA 72 bp AAATGTACTTCCTTCTGGGTCTTGGGCATGTCGGTGTaGCGCTGGGCACGGACAGAGCGAGCTGACTTGGCA +
Preference number: 6 (lower is better)
Translates to: KCTSFWVLGMSV*RWARTERADLA
Trigger: TGCCAAGTCAGCTCGCTCTGTCCGTGCCCAGCGCCACACCGACATGCCCAAGACCCAGAAGGAAGTACATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000424202.6
ENST00000644491.1
CDS CAA 90 bp GGTCTTCCTACATCCTGTAGTTCTTGTTTCCTGCACTCCCTCTACTaGCGTTCTTCAAATGTACTTCCTTCTGGGTCTTGGGCATGTCGG +
Preference number: 6 (lower is better)
Translates to: GLPTSCSSCFLHSLY*RSSNVLPSGSWACR
Trigger: CCGACATGCCCAAGACCCAGAAGGAAGTACATTTGAAGAACGCAAGTAGAGGGAGTGCAGGAAACAAGAACTACAGGATGTAGGAAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000424202.6
ENST00000644491.1
CDS GCA 72 bp CATCCTGTAGTTCTTGTTTCCTGCACTCCCTCTACTTaGGTTCTTCAAATGTACTTCCTTCTGGGTCTTGGG +
Preference number: 6 (lower is better)
Translates to: HPVVLVSCTPST*VLQMYFLLGLG
Trigger: CCCAAGACCCAGAAGGAAGTACATTTGAAGAACGCAAGTAGAGGGAGTGCAGGAAACAAGAACTACAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337514.11
ENST00000424202.6
ENST00000644491.1
CDS GCA 72 bp AGGAGGGTCTTCCTACATCCTGTAGTTCTTGTTTCCTaGACTCCCTCTACTTGCGTTCTTCAAATGTACTTC +
Preference number: 6 (lower is better)
Translates to: RRVFLHPVVLVS*TPSTCVLQMYF
Trigger: GAAGTACATTTGAAGAACGCAAGTAGAGGGAGTGCAGGAAACAAGAACTACAGGATGTAGGAAGACCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337514.11
ENST00000392904.5
ENST00000424202.6
ENST00000481539.1
ENST00000644491.1
CDS GCA 72 bp CATCCTGTAGTTCTTGTTTCCTGCACTCCCTCTACTTaGGTTCTTCAAATGTACTTCCTTTCCACAGGACAT +
Preference number: 6 (lower is better)
Translates to: HPVVLVSCTPST*VLQMYFLSTGH
Trigger: ATGTCCTGTGGAAAGGAAGTACATTTGAAGAACGCAAGTAGAGGGAGTGCAGGAAACAAGAACTACAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481539.1
CDS CAA 72 bp ACATCCTGTAGTTCTTGTTTCCTGCACTCCCTCTACTaGCGTTCTTCAAATGTACTTCCTTTCCACAGGACA +
Preference number: 6 (lower is better)
Translates to: TSCSSCFLHSLY*RSSNVLPFHRT
Trigger: TGTCCTGTGGAAAGGAAGTACATTTGAAGAACGCAAGTAGAGGGAGTGCAGGAAACAAGAACTACAGGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481539.1
CDS TCA 72 bp ATGGGAGATGTTGAGAGCAATGTCACATTTCAATTTTaGGGACTTTATTCCATTGCGCAGGCTCTATCTGCT +
Preference number: 6 (lower is better)
Translates to: MGDVESNVTFQF*GLYSIAQALSA
Trigger: AGCAGATAGAGCCTGCGCAATGGAATAAAGTCCTCAAAATTGAAATGTGACATTGCTCTCAACATCTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307046.8
ENST00000337514.11
ENST00000392905.7
CDS TCA 72 bp ATGAAGCAAAAAGAAATCCAGAGAGATGGGAGATGTTaGGAGCAATGTCACATTTCAATTTTGAGGACTTTA +
Preference number: 6 (lower is better)
Translates to: MKQKEIQRDGRC*EQCHISILRTL
Trigger: TAAAGTCCTCAAAATTGAAATGTGACATTGCTCTCAACATCTCCCATCTCTCTGGATTTCTTTTTGCTTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307046.8
ENST00000337514.11
ENST00000392905.7