RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGDCC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000103742

Ensembl transcript IDs: ENST00000352385.3, ENST00000558048.5, ENST00000558819.1, ENST00000559327.1, ENST00000560319.1, ENST00000561309.1

Found 419 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCGAGTGCGCGGCAGCCGCGGATACAGGAAGGGCACGGGGGCCTTaGAGCAGACATGAGGTAGTCACGTTGTTAGAGAAGGATGCAGAG +
Preference number: 1 (lower is better)
Translates to: GECAAAADTGRARGP*SRHEVVTLLEKDAE
Trigger: CTCTGCATCCTTCTCTAACAACGTGACTACCTCATGTCTGCTTCAAGGCCCCCGTGCCCTTCCTGTATCCGCGGCTGCCGCGCACTCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR TCA 90 bp AGTATCTGGGAGCAGGAGAAGGGCACTGGTGCTGGGAGAGCGAGGTaGCTGGGAGACAGAACACTAGAGCAGCCAGGGGCAAGGAAGGAG +
Preference number: 1 (lower is better)
Translates to: SIWEQEKGTGAGRAR*LGDRTLEQPGARKE
Trigger: CTCCTTCCTTGCCCCTGGCTGCTCTAGTGTTCTGTCTCCCAGTCACCTCGCTCTCCCAGCACCAGTGCCCTTCTCCTGCTCCCAGATACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR GCA 90 bp GGGCACCGTTCTGACCTGGAGGACCAATCAGGCTGTAGTGACCACTaGCTGGGCCACGGTTTCCCAGCTCAACAACCAGTACGCATACAT +
Preference number: 1 (lower is better)
Translates to: GHRSDLEDQSGCSDH*LGHGFPAQQPVRIH
Trigger: ATGTATGCGTACTGGTTGTTGAGCTGGGAAACCGTGGCCCAGGCAGTGGTCACTACAGCCTGATTGGTCCTCCAGGTCAGAACGGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR GCA 90 bp GATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATaGAGGGAAGCCAGAAGATCTTCTCCACACCCGCACTGGGCGTGG +
Preference number: 1 (lower is better)
Translates to: DPSMENPWIPIPKAR*REARRSSPHPHWAW
Trigger: CCACGCCCAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR CCA 90 bp ACCGTTCTGACCTGGAGGACCAATCAGGCTGTAGTGACCACTGCCTaGGCCACGGTTTCCCAGCTCAACAACCAGTACGCATACATGCAC +
Preference number: 1 (lower is better)
Translates to: TVLTWRTNQAVVTTA*ATVSQLNNQYAYMH
Trigger: GTGCATGTATGCGTACTGGTTGTTGAGCTGGGAAACCGTGGCCCAGGCAGTGGTCACTACAGCCTGATTGGTCCTCCAGGTCAGAACGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR GCA 90 bp CTCTCTATTTGGGCAATAAGGAGCTGGGAGGTGATGCAGCTGAAATaGCAGGCATTCAGAGCCTGCTTGCACCCAACCCAGCCAGACAGG +
Preference number: 1 (lower is better)
Translates to: LSIWAIRSWEVMQLK*QAFRACLHPTQPDR
Trigger: CCTGTCTGGCTGGGTTGGGTGCAAGCAGGCTCTGAATGCCTGGCATTTCAGCTGCATCACCTCCCAGCTCCTTATTGCCCAAATAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR CCA 90 bp TTCAGAGCCTGCTTGCACCCAACCCAGCCAGACAGGAGAATGGGCTaGGACTGTCTTTGTCAGACAGGCATTGGAGACACTCTCAGAGTG +
Preference number: 1 (lower is better)
Translates to: FRACLHPTQPDRRMG*DCLCQTGIGDTLRV
Trigger: CACTCTGAGAGTGTCTCCAATGCCTGTCTGACAAAGACAGTCCCAGCCCATTCTCCTGTCTGGCTGGGTTGGGTGCAAGCAGGCTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR CCA 90 bp AGGCATTCAGAGCCTGCTTGCACCCAACCCAGCCAGACAGGAGAATaGGCTGGGACTGTCTTTGTCAGACAGGCATTGGAGACACTCTCA +
Preference number: 1 (lower is better)
Translates to: RHSEPACTQPSQTGE*AGTVFVRQALETLS
Trigger: TGAGAGTGTCTCCAATGCCTGTCTGACAAAGACAGTCCCAGCCCATTCTCCTGTCTGGCTGGGTTGGGTGCAAGCAGGCTCTGAATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR TCA 90 bp CCTCTGGATCACAGCCCCCTTCCCTGTCTCAAACATTCCCCTCTATaGCTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAA +
Preference number: 1 (lower is better)
Translates to: PLDHSPLPCLKHSPL*LGSIHGEPLDPNPK
Trigger: TTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAATGTTTGAGACAGGGAAGGGGGCTGTGATCCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR CCA 90 bp GGATCACAGCCCCCTTCCCTGTCTCAAACATTCCCCTCTATGACTTaGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCAA +
Preference number: 1 (lower is better)
Translates to: GSQPPSLSQTFPSMT*IHPWRTLGSQSQRQ
Trigger: TTGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAATGTTTGAGACAGGGAAGGGGGCTGTGATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR GCA 90 bp CTGCCTGGGCCACGGTTTCCCAGCTCAACAACCAGTACGCATACATaGACTTCACACATGTGCACATCACATGTAGCTATGTCTCGTATG +
Preference number: 1 (lower is better)
Translates to: LPGPRFPSSTTSTHT*TSHMCTSHVAMSRM
Trigger: CATACGAGACATAGCTACATGTGATGTGCACATGTGTGAAGTGCATGTATGCGTACTGGTTGTTGAGCTGGGAAACCGTGGCCCAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR CCA 90 bp CCTTCCCTGTCTCAAACATTCCCCTCTATGACTTGGATCCATCCATaGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATGCAGGGAAG +
Preference number: 1 (lower is better)
Translates to: PSLSQTFPSMTWIHP*RTLGSQSQRQDAGK
Trigger: CTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAATGTTTGAGACAGGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR TCA 90 bp TGGACTGGTTATTTCGAATTTGGCCCAGAAGGCAGAGTTAACTCTTaGTGTGCCAATCAGACATCATTAGGGAGTAAAGACCCTAACATT +
Preference number: 1 (lower is better)
Translates to: WTGYFEFGPEGRVNS*CANQTSLGSKDPNI
Trigger: AATGTTAGGGTCTTTACTCCCTAATGATGTCTGATTGGCACATCAAGAGTTAACTCTGCCTTCTGGGCCAAATTCGAAATAACCAGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR CCA 90 bp GATGGCAGGCGAGTGCGCGGCAGCCGCGGATACAGGAAGGGCACGGGGGCCTTGGGCACCGTTCTGACCTaGAGGACCAATCAGGCTGTA +
Preference number: 2 (lower is better)
Translates to: DGRRVRGSRGYRKGTGALGTVLT*RTNQAV
Trigger: TACAGCCTGATTGGTCCTCCAGGTCAGAACGGTGCC...CAAGGCCCCCGTGCCCTTCCTGTATCCGCGGCTGCCGCGCACTCGCCTGCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR CCA 90 bp GATGGCAGGCGAGTGCGCGGCAGCCGCGGATACAGGAAGGGCACGGGGGCCTTGTGGGCAATAAGGAGCTaGGAGGTGATGCAGCTGAAA +
Preference number: 2 (lower is better)
Translates to: DGRRVRGSRGYRKGTGALWAIRS*EVMQLK
Trigger: TTTCAGCTGCATCACCTCCCAGCTCCTTATTGCCCA...CAAGGCCCCCGTGCCCTTCCTGTATCCGCGGCTGCCGCGCACTCGCCTGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR CCA 90 bp TTCCCCTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAACACCCGCACTGGGCGTaGGTGGGCTGCCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: FPSMTWIHPWRTLGSQSQHPHWA*VGCLGQ
Trigger: CTGCCCCAGGCAGCCCACCCACGCCCAGTGCGGGTG...TTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR GCA 90 bp CTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCATGGGCGTGGGTGGGCTaGCTGGGGCAGGGCAAGCAG +
Preference number: 2 (lower is better)
Translates to: LYDLDPSMENPWIPIPKAWAWVG*LGQGKQ
Trigger: CTGCTTGCCCTGCCCCAGGCAGCCCACCCACGCCCA...TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR CAA 90 bp AGCTGGGAGGTGATGCAGCTGAAATGCCAGGCATTCAGAGCCTGCTaGCACCCAACCCAGCCAGACAGGAGAATGGGCTGGGACTGTCTT +
Preference number: 2 (lower is better)
Translates to: SWEVMQLKCQAFRAC*HPTQPDRRMGWDCL
Trigger: AAGACAGTCCCAGCCCATTCTCCTGTCTGGCTGGGTTGGGTGCAAGCAGGCTCTGAATGCCTGGCATTTCAGCTGCATCACCTCCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR TCA 90 bp CAAACTGAAATGAGCTACCCCTTTTCCTGTGCAAAGACCTCCTTGCCAGCACCCCACAGGGCTGGGGACTaGCCACTGTGGGGCACCGTT +
Preference number: 2 (lower is better)
Translates to: QTEMSYPFSCAKTSLPAPHRAGD*PLWGTV
Trigger: AACGGTGCCCCACAGTGGTCAGTCCCCAGCCCTGTG...GGGTGCTGGCAAGGAGGTCTTTGCACAGGAAAAGGGGTAGCTCATTTCAGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR GCA 90 bp GGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCTCAAACAGGATGGCAGGCGAGTaGGCGGCAGCCGCGGATACA +
Preference number: 2 (lower is better)
Translates to: GHLFILSLWITAPFPVSNRMAGE*AAAADT
Trigger: TGTATCCGCGGCTGCCGCGCACTCGCCTGCCATCCT...GTTTGAGACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR CCA 90 bp GGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCTCAAACGAAGGGCACTGGTGCTaGGAGAGCGAGGTGACTGGG +
Preference number: 2 (lower is better)
Translates to: GHLFILSLWITAPFPVSNEGHWC*ESEVTG
Trigger: CCCAGTCACCTCGCTCTCCCAGCACCAGTGCCCTTC...GTTTGAGACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR GCA 90 bp ATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGAGGCTGTAGTGACCACTaGCTGGGCCACGGTTTCCCA +
Preference number: 2 (lower is better)
Translates to: MENPWIPIPKARCREARRGCSDH*LGHGFP
Trigger: TGGGAAACCGTGGCCCAGGCAGTGGTCACTACAGCC...TCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR CCA 90 bp TGTGCAAAGACCTCCTTGCCAGCACCCCAGAGGGTGAGATTCCTGTCATCCCCATCCATGGAGAACCCTTaGATCCCAATCCCAAAGGCA +
Preference number: 2 (lower is better)
Translates to: CAKTSLPAPQRVRFLSSPSMENP*IPIPKA
Trigger: TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGA...TGGGGATGACAGGAATCTCACCCTCTGGGGTGCTGGCAAGGAGGTCTTTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR CCA 90 bp AAGGGAGGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCAGCCAGACAGGAGAATaGGCTGGGACTGTCTTTGTC +
Preference number: 2 (lower is better)
Translates to: KGGHLFILSLWITAPFPVSQTGE*AGTVFV
Trigger: GACAAAGACAGTCCCAGCCCATTCTCCTGTCTGGCT...GACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCCTCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR CAA 90 bp AGCCAGACAGGAGAATGGGCTGGGACTGTCTTTGTCAGACAGGCATaGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGGAG +
Preference number: 2 (lower is better)
Translates to: SQTGEWAGTVFVRQA*ETLSECVIKGWAME
Trigger: CTCCATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACAAAGACAGTCCCAGCCCATTCTCCTGTCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR CAA 90 bp TGGATCACAGCCCCCTTCCCTGTCTCAAACATTCCCCTCTATGACTaGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCA +
Preference number: 2 (lower is better)
Translates to: WITAPFPVSNIPLYD*DPSMENPWIPIPKA
Trigger: TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAATGTTTGAGACAGGGAAGGGGGCTGTGATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR GCA 90 bp CAAACTGAAATGAGCTACCCCTTTTCCTGTGCAAAGACCTCCTTGCCAGCACCCGTGATGCAGCTGAAATaGCAGGCATTCAGAGCCTGC +
Preference number: 2 (lower is better)
Translates to: QTEMSYPFSCAKTSLPAPVMQLK*QAFRAC
Trigger: GCAGGCTCTGAATGCCTGGCATTTCAGCTGCATCAC...GGGTGCTGGCAAGGAGGTCTTTGCACAGGAAAAGGGGTAGCTCATTTCAGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR CCA 90 bp TTCCCCTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAATGTGTAATAAAAGGCTaGGCGATGGAGGTGGGGGCC +
Preference number: 2 (lower is better)
Translates to: FPSMTWIHPWRTLGSQSQCVIKG*AMEVGA
Trigger: GGCCCCCACCTCCATCGCCCAGCCTTTTATTACACA...TTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR GCA 90 bp ATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGATATGTGATCCATACCTaGCTGCCCCAAACCACATCC +
Preference number: 2 (lower is better)
Translates to: MENPWIPIPKARCREARRYVIHT*LPQTTS
Trigger: GGATGTGGTTTGGGGCAGGCAGGTATGGATCACATA...TCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR GCA 90 bp TCTTCCTTTAGCTTCTTCTGGAAGAGAGGCCCAAATCATCTCCATCCAGTAAACGGAGAAGGGCACTGGTaGTGGGAGAGCGAGGTGACT +
Preference number: 2 (lower is better)
Translates to: SSFSFFWKRGPNHLHPVNGEGHW*WESEVT
Trigger: AGTCACCTCGCTCTCCCAGCACCAGTGCCCTTCTCC...GTTTACTGGATGGAGATGATTTGGGCCTCTCTTCCAGAAGAAGCTAAAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR CCA 90 bp GAGGGTGAGATTCCTGTCATCCCCAATCCAGATCAAGTCAAGCCTCACAGGGTGTTGTCAGACAGGCATTaGAGACACTCTCAGAGTGTG +
Preference number: 2 (lower is better)
Translates to: EGEIPVIPNPDQVKPHRVLSDRH*RHSQSV
Trigger: CACACTCTGAGAGTGTCTCCAATGCCTGTCTGACAA...CACCCTGTGAGGCTTGACTTGATCTGGATTGGGGATGACAGGAATCTCACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR CCA 90 bp CTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCAGCCACCCTCTCTATTTaGGCAATAAGGAGCTGGGAG +
Preference number: 2 (lower is better)
Translates to: LYDLDPSMENPWIPIPKAATLSI*AIRSWE
Trigger: CTCCCAGCTCCTTATTGCCCAAATAGAGAGGGTGGC...TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR GCA 90 bp AAGGGAGGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCACCAGTACGCATACATaGACTTCACACATGTGCACA +
Preference number: 2 (lower is better)
Translates to: KGGHLFILSLWITAPFPVTSTHT*TSHMCT
Trigger: TGTGCACATGTGTGAAGTGCATGTATGCGTACTGGT...GACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCCTCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR GCA 90 bp TCTTCCTTTAGCTTCTTCTGGAAGAGAGGCCCAAATCATCTCCATCCAGTAAACCAGGCATTCAGAGCCTaGTTGCACCCAACCCAGCCA +
Preference number: 2 (lower is better)
Translates to: SSFSFFWKRGPNHLHPVNQAFRA*LHPTQP
Trigger: TGGCTGGGTTGGGTGCAAGCAGGCTCTGAATGCCTG...GTTTACTGGATGGAGATGATTTGGGCCTCTCTTCCAGAAGAAGCTAAAGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR TCA 90 bp TCTTCCTTTAGCTTCTTCTGGAAGAGAGGCCCAAATCATCTCCATCCAGTAAACAGTCTGGGAGAGGTGTaGGAGATAGCAGAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: SSFSFFWKRGPNHLHPVNSLGEV*EIAEEG
Trigger: TCCTTCCTCTGCTATCTCTCACACCTCTCCCAGACT...GTTTACTGGATGGAGATGATTTGGGCCTCTCTTCCAGAAGAAGCTAAAGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR GCA 90 bp ATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGATGCACTTCACACATGTaGACATCACATGTAGCTATG +
Preference number: 2 (lower is better)
Translates to: MENPWIPIPKARCREARRCTSHM*TSHVAM
Trigger: CATAGCTACATGTGATGTGCACATGTGTGAAGTGCA...TCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR GCA 90 bp GGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCTCAAACGATTACAAAATTAAATaGAGAGTTGCTCGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: GHLFILSLWITAPFPVSNDYKIK*RVARRG
Trigger: TCCCCTCCGAGCAACTCTGCATTTAATTTTGTAATC...GTTTGAGACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR TCA 90 bp ATACACAGTGGTGTTAGCCACAGCAGCGCTGAATGCTACAGAAATACTACAAGTAAGCCGCAACTGTGCTaGGAGACATTCCACCATTTA +
Preference number: 2 (lower is better)
Translates to: IHSGVSHSSAECYRNTTSKPQLC*ETFHHL
Trigger: TAAATGGTGGAATGTCTCTCAGCACAGTTGCGGCTT...ACTTGTAGTATTTCTGTAGCATTCAGCGCTGCTGTGGCTAACACCACTGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR GCA 90 bp ATACACAGTGGTGTTAGCCACAGCAGCGCTGAATGCTACAGAAATACTACAAGTGACCCTAACATTCTATaGTCCTATGAGAGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: IHSGVSHSSAECYRNTTSDPNIL*SYERAE
Trigger: CTCAGCCCTCTCATAGGAGCATAGAATGTTAGGGTC...ACTTGTAGTATTTCTGTAGCATTCAGCGCTGCTGTGGCTAACACCACTGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR CCA 90 bp ATACACAGTGGTGTTAGCCACAGCAGCGCTGAATGCTACAGAAATACTACAAGTACTTGGATCCATCCATaGAGAACCCTTGGATCCCAA +
Preference number: 2 (lower is better)
Translates to: IHSGVSHSSAECYRNTTSTWIHP*RTLGSQ
Trigger: TTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGT...ACTTGTAGTATTTCTGTAGCATTCAGCGCTGCTGTGGCTAACACCACTGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR TCA 72 bp GCGGCAGCCGCGGATACAGGAAGGGCACGGGGGCCTTaGAGCAGACATGAGGTAGTCACGTTGTTAGAGAAG +
Preference number: 3 (lower is better)
Translates to: AAAADTGRARGP*SRHEVVTLLEK
Trigger: CTTCTCTAACAACGTGACTACCTCATGTCTGCTTCAAGGCCCCCGTGCCCTTCCTGTATCCGCGGCTGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR GCA 72 bp GAGGTGATGCAGCTGAAATGCCAGGCATTCAGAGCCTaGTTGCACCCAACCCAGCCAGACAGGAGAATGGGC +
Preference number: 3 (lower is better)
Translates to: EVMQLKCQAFRA*LHPTQPDRRMG
Trigger: GCCCATTCTCCTGTCTGGCTGGGTTGGGTGCAAGCAGGCTCTGAATGCCTGGCATTTCAGCTGCATCACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR CCA 72 bp GAGCCTGCTTGCACCCAACCCAGCCAGACAGGAGAATaGGCTGGGACTGTCTTTGTCAGACAGGCATTGGAG +
Preference number: 3 (lower is better)
Translates to: EPACTQPSQTGE*AGTVFVRQALE
Trigger: CTCCAATGCCTGTCTGACAAAGACAGTCCCAGCCCATTCTCCTGTCTGGCTGGGTTGGGTGCAAGCAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR CAA 90 bp TGTGCAAAGACCTCCTTGCCAGCACCCCAGAGGGTGAGATTCCTGTCATCCCCAGGCCACCCTCTCTATTaGGGCAATAAGGAGCTGGGA +
Preference number: 3 (lower is better)
Translates to: CAKTSLPAPQRVRFLSSPGHPLY*GNKELG
Trigger: TCCCAGCTCCTTATTGCCCAAATAGAGAGGGTGGCC...TGGGGATGACAGGAATCTCACCCTCTGGGGTGCTGGCAAGGAGGTCTTTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR GCA 72 bp TCTGACCTGGAGGACCAATCAGGCTGTAGTGACCACTaGCTGGGCCACGGTTTCCCAGCTCAACAACCAGTA +
Preference number: 3 (lower is better)
Translates to: SDLEDQSGCSDH*LGHGFPAQQPV
Trigger: TACTGGTTGTTGAGCTGGGAAACCGTGGCCCAGGCAGTGGTCACTACAGCCTGATTGGTCCTCCAGGTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR CCA 72 bp TGCTTGCACCCAACCCAGCCAGACAGGAGAATGGGCTaGGACTGTCTTTGTCAGACAGGCATTGGAGACACT +
Preference number: 3 (lower is better)
Translates to: CLHPTQPDRRMG*DCLCQTGIGDT
Trigger: AGTGTCTCCAATGCCTGTCTGACAAAGACAGTCCCAGCCCATTCTCCTGTCTGGCTGGGTTGGGTGCAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR CAA 90 bp TTCCCCTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAGCATTCAGAGCCTGCTaGCACCCAACCCAGCCAGAC +
Preference number: 3 (lower is better)
Translates to: FPSMTWIHPWRTLGSQSQAFRAC*HPTQPD
Trigger: GTCTGGCTGGGTTGGGTGCAAGCAGGCTCTGAATGC...TTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR TCA 72 bp CACAGCCCCCTTCCCTGTCTCAAACATTCCCCTCTATaGCTTGGATCCATCCATGGAGAACCCTTGGATCCC +
Preference number: 3 (lower is better)
Translates to: HSPLPCLKHSPL*LGSIHGEPLDP
Trigger: GGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAATGTTTGAGACAGGGAAGGGGGCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR GCA 72 bp ATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATaGAGGGAAGCCAGAAGATCTTCTCCACACCCGCAC +
Preference number: 3 (lower is better)
Translates to: MENPWIPIPKAR*REARRSSPHPH
Trigger: GTGCGGGTGTGGAGAAGATCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR CAA 90 bp TGTGCAAAGACCTCCTTGCCAGCACCCCAGAGGGTGAGATTCCTGTCATCCCCATTTGTCAGACAGGCATaGGAGACACTCTCAGAGTGT +
Preference number: 3 (lower is better)
Translates to: CAKTSLPAPQRVRFLSSPFVRQA*ETLSEC
Trigger: ACACTCTGAGAGTGTCTCCAATGCCTGTCTGACAAA...TGGGGATGACAGGAATCTCACCCTCTGGGGTGCTGGCAAGGAGGTCTTTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR TCA 72 bp GGATACAGGAAGGGCACGGGGGCCTTGAAGCAGACATaGGGTAGTCACGTTGTTAGAGAAGGATGCAGAGTT +
Preference number: 3 (lower is better)
Translates to: GYRKGTGALKQT*GSHVVREGCRV
Trigger: AACTCTGCATCCTTCTCTAACAACGTGACTACCTCATGTCTGCTTCAAGGCCCCCGTGCCCTTCCTGTATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR CCA 72 bp CCCCCTTCCCTGTCTCAAACATTCCCCTCTATGACTTaGATCCATCCATGGAGAACCCTTGGATCCCAATCC +
Preference number: 3 (lower is better)
Translates to: PPSLSQTFPSMT*IHPWRTLGSQS
Trigger: GGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAATGTTTGAGACAGGGAAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR-3UTR CAA 90 bp CTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCAGAAGCTCCAAAGGGCTaGATGATGTATCTACAGGCA +
Preference number: 3 (lower is better)
Translates to: LYDLDPSMENPWIPIPKAEAPKG*MMYLQA
Trigger: TGCCTGTAGATACATCATCAAGCCCTTTGGAGCTTC...TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR GCA 72 bp CCACGGTTTCCCAGCTCAACAACCAGTACGCATACATaGACTTCACACATGTGCACATCACATGTAGCTATG +
Preference number: 3 (lower is better)
Translates to: PRFPSSTTSTHT*TSHMCTSHVAM
Trigger: CATAGCTACATGTGATGTGCACATGTGTGAAGTGCATGTATGCGTACTGGTTGTTGAGCTGGGAAACCGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR TCA 72 bp GGAGGTGGAAACGTAGGTGCAGACATCAACAGTGAGTaGCACCCGAGTATAATAAACACAGATGCTTTCAGG +
Preference number: 3 (lower is better)
Translates to: GGGNVGADINSE*HPSIINTDAFR
Trigger: CCTGAAAGCATCTGTGTTTATTATACTCGGGTGTCACTCACTGTTGATGTCTGCACCTACGTTTCCACCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR TCA 72 bp GGGAGGAGGTGGAAACGTAGGTGCAGACATCAACAGTaGGTGACACCCGAGTATAATAAACACAGATGCTTT +
Preference number: 3 (lower is better)
Translates to: GRRWKRRCRHQQ*VTPEYNKHRCF
Trigger: AAAGCATCTGTGTTTATTATACTCGGGTGTCACTCACTGTTGATGTCTGCACCTACGTTTCCACCTCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR CCA 72 bp TCTCAAACATTCCCCTCTATGACTTGGATCCATCCATaGAGAACCCTTGGATCCCAATCCCAAAGGCAAGAT +
Preference number: 3 (lower is better)
Translates to: SQTFPSMTWIHP*RTLGSQSQRQD
Trigger: ATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAATGTTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR GCA 72 bp CAGACATCATTAGGGAGTAAAGACCCTAACATTCTATaGTCCTATGAGAGGGCTGAGGTGAAAAACCAAATA +
Preference number: 3 (lower is better)
Translates to: QTSLGSKDPNIL*SYERAEVKNQI
Trigger: TATTTGGTTTTTCACCTCAGCCCTCTCATAGGAGCATAGAATGTTAGGGTCTTTACTCCCTAATGATGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GGGAAGCCAGAAGATCTTCTCCACACCCGCACTGGGCGTGGGTGGGCTGCCTGGCGCCGCCCTGGACCTTaGCGCGCCCGTTGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: GKPEDLLHTRTGRGWAAWRRPGP*RARWAA
Trigger: TGCGGCCCAACGGGCGCGTCAAGGTCCAGGGCGGCG...CCAGGCAGCCCACCCACGCCCAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GATGGCAGGCGAGTGCGCGGCAGCCGCGGATACAGGAAGGGCACGGGGGCCTTGGACCAGTCCTGGGGATaGGGGTGCACAAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: DGRRVRGSRGYRKGTGALDQSWG*GCTRDS
Trigger: GGAGTCCCTTGTGCACCCCCATCCCCAGGACTGGTC...CAAGGCCCCCGTGCCCTTCCTGTATCCGCGGCTGCCGCGCACTCGCCTGCCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GGGAAGCCAGAAGATCTTCTCCACACCCGCACTGGGCGTGGGTGGGCTGCCTGGGCAGCCACGCCACCCTaGTGTCCGAAGGGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: GKPEDLLHTRTGRGWAAWAATPP*CPKGWG
Trigger: GCCCCAACCCTTCGGACATCAGGGTGGCGTGGCTGC...CCAGGCAGCCCACCCACGCCCAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GATGGCAGGCGAGTGCGCGGCAGCCGCGGATACAGGAAGGGCACGGGGGCCTTGAGGGCACGGGGGCCTTaGAGCAGACATGAGGTAGTC +
Preference number: 4 (lower is better)
Translates to: DGRRVRGSRGYRKGTGALRARGP*SRHEVV
Trigger: GACTACCTCATGTCTGCTTCAAGGCCCCCGTGCCCT...CAAGGCCCCCGTGCCCTTCCTGTATCCGCGGCTGCCGCGCACTCGCCTGCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp GGGAAGCCAGAAGATCTTCTCCACACCCGCACTGGGCGTGGGTGGGCTGCCTGGAGGATGGCAGGCGAGTaGGCGGCAGCCGCGGATACA +
Preference number: 4 (lower is better)
Translates to: GKPEDLLHTRTGRGWAAWRMAGE*AAAADT
Trigger: TGTATCCGCGGCTGCCGCGCACTCGCCTGCCATCCT...CCAGGCAGCCCACCCACGCCCAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GATGGCAGGCGAGTGCGCGGCAGCCGCGGATACAGGAAGGGCACGGGGGCCTTGGGAGAGAGAAGCCGATaGTCTGCTCGCTGTGCATCT +
Preference number: 4 (lower is better)
Translates to: DGRRVRGSRGYRKGTGALGERSR*SARCAS
Trigger: AGATGCACAGCGAGCAGATCATCGGCTTCTCTCTCC...CAAGGCCCCCGTGCCCTTCCTGTATCCGCGGCTGCCGCGCACTCGCCTGCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GGGAAGCCAGAAGATCTTCTCCACACCCGCACTGGGCGTGGGTGGGCTGCCTGGAGGGGGTGGCTGCCATaGCACGACCAGGGACTCCAT +
Preference number: 4 (lower is better)
Translates to: GKPEDLLHTRTGRGWAAWRGWLP*HDQGLH
Trigger: ATGGAGTCCCTGGTCGTGTCATGGCAGCCACCCCCT...CCAGGCAGCCCACCCACGCCCAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GGGAAGCCAGAAGATCTTCTCCACACCCGCACTGGGCGTGGGTGGGCTGCCTGGGATTCCGCATGGACGTaGGCTGGAGGCAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GKPEDLLHTRTGRGWAAWDSAWT*AGGRGG
Trigger: ACCACCCCTGCCTCCAGCCCACGTCCATGCGGAATC...CCAGGCAGCCCACCCACGCCCAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GGGAAGCCAGAAGATCTTCTCCACACCCGCACTGGGCGTGGGTGGGCTGCCTGGTGCGGCCCAGGACGATaGCATCTGTGGAGATGGGCT +
Preference number: 4 (lower is better)
Translates to: GKPEDLLHTRTGRGWAAWCGPGR*HLWRWA
Trigger: AGCCCATCTCCACAGATGTCATCGTCCTGGGCCGCA...CCAGGCAGCCCACCCACGCCCAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp GATGGCAGGCGAGTGCGCGGCAGCCGCGGATACAGGAAGGGCACGGGGGCCTTGGACTCCATCTTTGCCTaGACCTTCAACTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: DGRRVRGSRGYRKGTGALDSIFA*TFNSAG
Trigger: CCCTGCAGAGTTGAAGGTGCAGGCAAAGATGGAGTC...CAAGGCCCCCGTGCCCTTCCTGTATCCGCGGCTGCCGCGCACTCGCCTGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp GATGGCAGGCGAGTGCGCGGCAGCCGCGGATACAGGAAGGGCACGGGGGCCTTGCAGGCTGCGTGTGGTTaGTGCTGTACAGGATCAGAT +
Preference number: 4 (lower is better)
Translates to: DGRRVRGSRGYRKGTGALQAACG*CCTGSD
Trigger: ATCTGATCCTGTACAGCAGCAACCACACGCAGCCTG...CAAGGCCCCCGTGCCCTTCCTGTATCCGCGGCTGCCGCGCACTCGCCTGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GATGGCAGGCGAGTGCGCGGCAGCCGCGGATACAGGAAGGGCACGGGGGCCTTGTCCAGGTCTTGGAGATaGAGGTCAGGGTTCCCGTTA +
Preference number: 4 (lower is better)
Translates to: DGRRVRGSRGYRKGTGALSRSWR*RSGFPL
Trigger: TAACGGGAACCCTGACCTCCATCTCCAAGACCTGGA...CAAGGCCCCCGTGCCCTTCCTGTATCCGCGGCTGCCGCGCACTCGCCTGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GGGAAGCCAGAAGATCTTCTCCACACCCGCACTGGGCGTGGGTGGGCTGCCTGGTCCATGTCCACGCCGTaGGACTGCACTGCAAACTCG +
Preference number: 4 (lower is better)
Translates to: GKPEDLLHTRTGRGWAAWSMSTP*DCTANS
Trigger: CGAGTTTGCAGTGCAGTCTCACGGCGTGGACATGGA...CCAGGCAGCCCACCCACGCCCAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp GGGAAGCCAGAAGATCTTCTCCACACCCGCACTGGGCGTGGGTGGGCTGCCTGGCCACCCATAAGGCTGTaGACTTCAGCCCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GKPEDLLHTRTGRGWAAWPPIRL*TSALSS
Trigger: GGAGGACAGGGCTGAAGTGCACAGCCTTATGGGTGG...CCAGGCAGCCCACCCACGCCCAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GATGGCAGGCGAGTGCGCGGCAGCCGCGGATACAGGAAGGGCACGGGGGCCTTGTACACCTTGTTTGGCTaGAGCGAGTTCAGCATAAGC +
Preference number: 4 (lower is better)
Translates to: DGRRVRGSRGYRKGTGALYTLFG*SEFSIS
Trigger: GCTTATGCTGAACTCGCTTCAGCCAAACAAGGTGTA...CAAGGCCCCCGTGCCCTTCCTGTATCCGCGGCTGCCGCGCACTCGCCTGCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp GACATACACGGCCACAGGTATCGCATCCTATGTGATCCATACCTGCCTGCCCCATGGCGAAGTCGCGCGTaGGGGGCTTGTTGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: DIHGHRYRILCDPYLPAPWRSRA*GACWRG
Trigger: GCCGCGCCAACAAGCCCCGCACGCGCGACTTCGCCA...TGGGGCAGGCAGGTATGGATCACATAGGATGCGATACCTGTGGCCGTGTATGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGTGCAAAGACCTCCTTGCCAGCACCCCAGAGGGTGAGATTCCTGTCATCCCCACCCACATCCCAAGCCTaGTCTCCACGGCCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: CAKTSLPAPQRVRFLSSPPTSQA*SPRPPG
Trigger: GCCAGGGGGCCGTGGAGACCAGGCTTGGGATGTGGG...TGGGGATGACAGGAATCTCACCCTCTGGGGTGCTGGCAAGGAGGTCTTTGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGCCTGGGCCACGGTTTCCCAGCTCAACAACCAGTACGCATACATGCACTTCACGGGAGGGATTCCCTGTaGGGGCTGCGGCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: CLGHGFPAQQPVRIHALHGRDSL*GLRRRP
Trigger: TGGCCTGCGCCGCAGCCCCCACAGGGAATCCCTCCC...GTGAAGTGCATGTATGCGTACTGGTTGTTGAGCTGGGAAACCGTGGCCCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGCCTGGGCCACGGTTTCCCAGCTCAACAACCAGTACGCATACATGCACTTCACGGGGGCCCACAGGGCTaGGGACTGACCACTGTGGGG +
Preference number: 4 (lower is better)
Translates to: CLGHGFPAQQPVRIHALHGGPQG*GLTTVG
Trigger: CCCCACAGTGGTCAGTCCCCAGCCCTGTGGGCCCCC...GTGAAGTGCATGTATGCGTACTGGTTGTTGAGCTGGGAAACCGTGGCCCAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp CAAACTGAAATGAGCTACCCCTTTTCCTGTGCAAAGACCTCCTTGCCAGCACCCCCTCGGGCGCCTGAGTaGTGGCGGGAGCCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QTEMSYPFSCAKTSLPAPPRAPE*WREPPA
Trigger: TGCTGGCGGCTCCCGCCATCACTCAGGCGCCCGAGG...GGGTGCTGGCAAGGAGGTCTTTGCACAGGAAAAGGGGTAGCTCATTTCAGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GACATACACGGCCACAGGTATCGCATCCTATGTGATCCATACCTGCCTGCCCCATCCAGGTCACCCTGGTaGGGGGTCCAGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: DIHGHRYRILCDPYLPAPSRSPW*GVQRQQ
Trigger: CTGCTGCCGCTGGACCCCCCACCAGGGTGACCTGGA...TGGGGCAGGCAGGTATGGATCACATAGGATGCGATACCTGTGGCCGTGTATGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GACATACACGGCCACAGGTATCGCATCCTATGTGATCCATACCTGCCTGCCCCACGTCCTGCCCCCTGGTaGACGCCAGGGACCCTCTGT +
Preference number: 4 (lower is better)
Translates to: DIHGHRYRILCDPYLPAPRPAPW*TPGTLC
Trigger: ACAGAGGGTCCCTGGCGTCCACCAGGGGGCAGGACG...TGGGGCAGGCAGGTATGGATCACATAGGATGCGATACCTGTGGCCGTGTATGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGCCTGGGCCACGGTTTCCCAGCTCAACAACCAGTACGCATACATGCACTTCACGCCGGTCAGGCAGGGTaGAGCGCTCCACCACAGAGC +
Preference number: 4 (lower is better)
Translates to: CLGHGFPAQQPVRIHALHAGQAG*SAPPQS
Trigger: GCTCTGTGGTGGAGCGCTCCACCCTGCCTGACCGGC...GTGAAGTGCATGTATGCGTACTGGTTGTTGAGCTGGGAAACCGTGGCCCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GAGGGTGAGATTCCTGTCATCCCCAATCCAGATCAAGTCAAGCCTCACAGGGTGCTGGGGCTGCCACAATaGCCACGTCCTGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: EGEIPVIPNPDQVKPHRVLGLPQ*PRPAPW
Trigger: CCAGGGGGCAGGACGTGGTCATTGTGGCAGCCCCAG...CACCCTGTGAGGCTTGACTTGATCTGGATTGGGGATGACAGGAATCTCACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GACATACACGGCCACAGGTATCGCATCCTATGTGATCCATACCTGCCTGCCCCACACAGGGCTGGGGACTaGCCACTGTGGGGCACCGTT +
Preference number: 4 (lower is better)
Translates to: DIHGHRYRILCDPYLPAPHRAGD*PLWGTV
Trigger: AACGGTGCCCCACAGTGGTCAGTCCCCAGCCCTGTG...TGGGGCAGGCAGGTATGGATCACATAGGATGCGATACCTGTGGCCGTGTATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TTCCCCTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGCGGCGCCCCGTTGTaGAGCCAGCGCAGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: FPSMTWIHPWRTLGSQSQSGAPL*SQRSAG
Trigger: GCCAGCGCTGCGCTGGCTGCACAACGGGGCGCCGCT...TTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp GAGGGTGAGATTCCTGTCATCCCCAATCCAGATCAAGTCAAGCCTCACAGGGTGGTCTGGCCCGGGGGCTaGCAGCTCACACCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: EGEIPVIPNPDQVKPHRVVWPGG*QLTPSQ
Trigger: TTGGGAGGGTGTGAGCTGGCAGCCCCCGGGCCAGAC...CACCCTGTGAGGCTTGACTTGATCTGGATTGGGGATGACAGGAATCTCACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp ATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGATGGGCGTGGGTGGGCTaGCTGGGGCAGGGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: MENPWIPIPKARCREARRWAWVG*LGQGKQ
Trigger: CTGCTTGCCCTGCCCCAGGCAGCCCACCCACGCCCA...TCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GAGGGTGAGATTCCTGTCATCCCCAATCCAGATCAAGTCAAGCCTCACAGGGTGGGCGAGCTGAGTTGGTaGCCACGCAGCGGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: EGEIPVIPNPDQVKPHRVGELSW*PRSGRG
Trigger: GCCCCTACCGCTGCGTGGCCACCAACTCAGCTCGCC...CACCCTGTGAGGCTTGACTTGATCTGGATTGGGGATGACAGGAATCTCACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp ATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGACCACGTCCTGCCCCCTaGTGGACGCCAGGGACCCTC +
Preference number: 4 (lower is better)
Translates to: MENPWIPIPKARCREARRPRPAP*WTPGTL
Trigger: GAGGGTCCCTGGCGTCCACCAGGGGGCAGGACGTGG...TCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp CAAACTGAAATGAGCTACCCCTTTTCCTGTGCAAAGACCTCCTTGCCAGCACCCGCTCAGCGGCTGCAGTaGCGAAGTCGCGCGTGCGGG +
Preference number: 4 (lower is better)
Translates to: QTEMSYPFSCAKTSLPAPAQRLQ*RSRACG
Trigger: CCCGCACGCGCGACTTCGCCACTGCAGCCGCTGAGC...GGGTGCTGGCAAGGAGGTCTTTGCACAGGAAAAGGGGTAGCTCATTTCAGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp ATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGACTGCCACCGCCGCCCTaGACCTTGACGCGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: MENPWIPIPKARCREARRLPPPP*TLTRPL
Trigger: CAACGGGCGCGTCAAGGTCCAGGGCGGCGGTGGCAG...TCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp ATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGACGGGATTCCCGGGGGTaGCGGTGGAGGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: MENPWIPIPKARCREARRRDSRG*RWRTGL
Trigger: CAGGCCTGTCCTCCACCGCCACCCCCGGGAATCCCG...TCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp TGTGCAAAGACCTCCTTGCCAGCACCCCAGAGGGTGAGATTCCTGTCATCCCCACACAGCCTCAGGGACTaGCTCGTCACTGCCATTGGG +
Preference number: 4 (lower is better)
Translates to: CAKTSLPAPQRVRFLSSPHSLRD*LVTAIG
Trigger: CCCAATGGCAGTGACGAGTCAGTCCCTGAGGCTGTG...TGGGGATGACAGGAATCTCACCCTCTGGGGTGCTGGCAAGGAGGTCTTTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp GACATACACGGCCACAGGTATCGCATCCTATGTGATCCATACCTGCCTGCCCCAACAATGACCACGTCCTaGCCCCTGGTGGACGCCAGG +
Preference number: 4 (lower is better)
Translates to: DIHGHRYRILCDPYLPAPTMTTS*PLVDAR
Trigger: CCTGGCGTCCACCAGGGGGCAGGACGTGGTCATTGT...TGGGGCAGGCAGGTATGGATCACATAGGATGCGATACCTGTGGCCGTGTATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TGCCTGGGCCACGGTTTCCCAGCTCAACAACCAGTACGCATACATGCACTTCACCAGTGTGTGCACCAGTaGTGGGGTGGAGGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: CLGHGFPAQQPVRIHALHQCVHQ*WGGGAA
Trigger: AGCCGCACCTCCACCCCAGCACTGGTGCACACACTG...GTGAAGTGCATGTATGCGTACTGGTTGTTGAGCTGGGAAACCGTGGCCCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TGCCTGGGCCACGGTTTCCCAGCTCAACAACCAGTACGCATACATGCACTTCACTGCAGCAACAGCGTCTaGCCAGTTCCAGCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: CLGHGFPAQQPVRIHALHCSNSV*PVPAGG
Trigger: GCCCCCTGCTGGAACTGGGCAGACGCTGTTGCTGCA...GTGAAGTGCATGTATGCGTACTGGTTGTTGAGCTGGGAAACCGTGGCCCAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp GGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCTCAAACAGCCAGGCTGCCCCCTaGCCTGGATCCCCAACACCC +
Preference number: 4 (lower is better)
Translates to: GHLFILSLWITAPFPVSNSQAAP*PGSPTP
Trigger: GGGTGTTGGGGATCCAGGGCAGGGGGCAGCCTGGCT...GTTTGAGACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGGGTCGGATGGGGGTGTaGAGGGCCGGTCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VRQALETLSECVIKGWAMGRMGV*RAGQAG
Trigger: CCCTGCCTGACCGGCCCTCCACACCCCCATCCGACC...CATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GACATACACGGCCACAGGTATCGCATCCTATGTGATCCATACCTGCCTGCCCCAGGCCAAGCCGAGCTCTaGAGTACAGCGCGGGATTCC +
Preference number: 4 (lower is better)
Translates to: DIHGHRYRILCDPYLPAPGQAEL*STARDS
Trigger: GGAATCCCGCGCTGTACTCCAGAGCTCGGCTTGGCC...TGGGGCAGGCAGGTATGGATCACATAGGATGCGATACCTGTGGCCGTGTATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp CTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCATGGGCAGGCCTGGGCTaGCTCCTAGAGGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LYDLDPSMENPWIPIPKAWAGLG*LLEGRG
Trigger: CCCCCTGCCCTCTAGGAGCCAGCCCAGGCCTGCCCA...TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp TGCCTGGGCCACGGTTTCCCAGCTCAACAACCAGTACGCATACATGCACTTCACCGAGTGTGGCAAGCTTaGCGACAGCAGTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CLGHGFPAQQPVRIHALHRVWQA*RQQSGW
Trigger: CCAGCCAGACTGCTGTCGTCAAGCTTGCCACACTCG...GTGAAGTGCATGTATGCGTACTGGTTGTTGAGCTGGGAAACCGTGGCCCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GACATACACGGCCACAGGTATCGCATCCTATGTGATCCATACCTGCCTGCCCCACCCCAACACCCGAGATaGGATCAGGAGCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: DIHGHRYRILCDPYLPAPPQHPR*DQEPLE
Trigger: CTCCAGAGGCTCCTGATCTCATCTCGGGTGTTGGGG...TGGGGCAGGCAGGTATGGATCACATAGGATGCGATACCTGTGGCCGTGTATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp AATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGATCTTCTCCACACCCGCACTGGGGTGTCCCCATCCTTaGTCCAGGTCACCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: NPKGKMQGSQKIFSTPALGCPHP*SRSPWW
Trigger: CCACCAGGGTGACCTGGAGCAAGGATGGGGACACCC...CAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp GTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGACACGAAGCGCGCTGTaGTCGCCCGCGTCCGCGACA +
Preference number: 4 (lower is better)
Translates to: VRQALETLSECVIKGWAMTRSAL*SPASAT
Trigger: TGTCGCGGACGCGGGCGAGCACAGCGCGCTTCGTGT...CATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGTGCAAAGACCTCCTTGCCAGCACCCCAGAGGGTGAGATTCCTGTCATCCCCATTGGGTGCTAGTGGCTaGGACAGCCACAGGGAACCA +
Preference number: 4 (lower is better)
Translates to: CAKTSLPAPQRVRFLSSPLGASG*DSHREP
Trigger: TGGTTCCCTGTGGCTGTCCCAGCCACTAGCACCCAA...TGGGGATGACAGGAATCTCACCCTCTGGGGTGCTGGCAAGGAGGTCTTTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGCCTGGGCCACGGTTTCCCAGCTCAACAACCAGTACGCATACATGCACTTCACCTGAGTAGGGCCTCCTaGCTGAAGTGCTGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: CLGHGFPAQQPVRIHALHLSRAS*LKCWRA
Trigger: AGCTCGCCAGCACTTCAGCCAGGAGGCCCTACTCAG...GTGAAGTGCATGTATGCGTACTGGTTGTTGAGCTGGGAAACCGTGGCCCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp AAGGGAGGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCCTGGACAGGGAGAGCTaGGGTGCTGCACTGGGGACA +
Preference number: 4 (lower is better)
Translates to: KGGHLFILSLWITAPFPVLDRES*GAALGT
Trigger: TGTCCCCAGTGCAGCACCCCAGCTCTCCCTGTCCAG...GACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCCTCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp CAAACTGAAATGAGCTACCCCTTTTCCTGTGCAAAGACCTCCTTGCCAGCACCCCCGAAGGGTTGGGGCTaGACAGGGAGAGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: QTEMSYPFSCAKTSLPAPPKGWG*TGRAGV
Trigger: CACCCCAGCTCTCCCTGTCCAGCCCCAACCCTTCGG...GGGTGCTGGCAAGGAGGTCTTTGCACAGGAAAAGGGGTAGCTCATTTCAGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp ATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGAGCAGGCGATCGCCATTaGCCTCCTCCTCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: MENPWIPIPKARCREARRAGDRH*PPPQPP
Trigger: TGGGGGCTGAGGAGGAGGCCAATGGCGATCGCCTGC...TCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGTGCAAAGACCTCCTTGCCAGCACCCCAGAGGGTGAGATTCCTGTCATCCCCACGGCCAGGGACTAGCTaGGTCAGCTCATACTGCTTC +
Preference number: 4 (lower is better)
Translates to: CAKTSLPAPQRVRFLSSPRPGTS*VSSYCF
Trigger: GAAGCAGTATGAGCTGACCCAGCTAGTCCCTGGCCG...TGGGGATGACAGGAATCTCACCCTCTGGGGTGCTGGCAAGGAGGTCTTTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGCCTGGGCCACGGTTTCCCAGCTCAACAACCAGTACGCATACATGCACTTCACAGGGGTGGTCCCCTCTaGATAGGCATGTCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: CLGHGFPAQQPVRIHALHRGGPL*IGMSGA
Trigger: GGCACCAGACATGCCTATCCAGAGGGGACCACCCCT...GTGAAGTGCATGTATGCGTACTGGTTGTTGAGCTGGGAAACCGTGGCCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TTCCCCTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAACAGTCGCAGGTCGGATaGGGGTGTGGAGGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: FPSMTWIHPWRTLGSQSQQSQVG*GCGGPV
Trigger: GACCGGCCCTCCACACCCCCATCCGACCTGCGACTG...TTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GACATACACGGCCACAGGTATCGCATCCTATGTGATCCATACCTGCCTGCCCCAGTGAGCAAGGTCCACTaGTGCTCAGGCTGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: DIHGHRYRILCDPYLPAPVSKVH*CSGCVW
Trigger: CCACACGCAGCCTGAGCACCAGTGGACCTTGCTCAC...TGGGGCAGGCAGGTATGGATCACATAGGATGCGATACCTGTGGCCGTGTATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp CTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGGAGACCGGGGATCTaGGCAGGCCTGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LYDLDPSMENPWIPIPKARRPGI*AGLGWL
Trigger: GAGCCAGCCCAGGCCTGCCCAGATCCCCGGTCTCCT...TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GAGGGTGAGATTCCTGTCATCCCCAATCCAGATCAAGTCAAGCCTCACAGGGTGGCAGGAGAAGGGCACTaGTGCTGGGAGAGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: EGEIPVIPNPDQVKPHRVAGEGH*CWESEV
Trigger: CACCTCGCTCTCCCAGCACCAGTGCCCTTCTCCTGC...CACCCTGTGAGGCTTGACTTGATCTGGATTGGGGATGACAGGAATCTCACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR CAA 72 bp GTGATGCAGCTGAAATGCCAGGCATTCAGAGCCTGCTaGCACCCAACCCAGCCAGACAGGAGAATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VMQLKCQAFRAC*HPTQPDRRMGW
Trigger: CCAGCCCATTCTCCTGTCTGGCTGGGTTGGGTGCAAGCAGGCTCTGAATGCCTGGCATTTCAGCTGCATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp AAGGGAGGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCTTCTCCTCCACCGTCTaGGACTCCGGGTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: KGGHLFILSLWITAPFPVFSSTV*DSGCRE
Trigger: CTCTCTGCACCCGGAGTCTCAGACGGTGGAGGAGAA...GACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCCTCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp ATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGAGTAGGGCCTCCTGGCTaGAGTGCTGGCGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: MENPWIPIPKARCREARRVGPPG*SAGELS
Trigger: ACTCAGCTCGCCAGCACTTCAGCCAGGAGGCCCTAC...TCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp AATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGATCTTCTCCACACCCGCACTGAGGGGTGGGGTCAGCTaGGGCCACACATTCCATCAC +
Preference number: 4 (lower is better)
Translates to: NPKGKMQGSQKIFSTPALRGGVS*GHTFHH
Trigger: GTGATGGAATGTGTGGCCTCAGCTGACCCCACCCCT...CAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp TGTGCAAAGACCTCCTTGCCAGCACCCCAGAGGGTGAGATTCCTGTCATCCCCAGTATCGCATCCTATGTaGTCCATACCTGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: CAKTSLPAPQRVRFLSSPVSHPM*SIPACP
Trigger: GGGGCAGGCAGGTATGGATCACATAGGATGCGATAC...TGGGGATGACAGGAATCTCACCCTCTGGGGTGCTGGCAAGGAGGTCTTTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp GTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGGGCCCCGAAGCCGGCTaGTGTACCAGCCGAAATCCG +
Preference number: 4 (lower is better)
Translates to: VRQALETLSECVIKGWAMGPEAG*CTSRNP
Trigger: CGGATTTCGGCTGGTACAGCAGCCGGCTTCGGGGCC...CATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp CTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCAATTCCCTGTGGGGGCTaGGGCGCAGGCCAGCACACA +
Preference number: 4 (lower is better)
Translates to: LYDLDPSMENPWIPIPKAIPCGG*GAGQHT
Trigger: TGTGTGCTGGCCTGCGCCGCAGCCCCCACAGGGAAT...TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp AAGGGAGGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCGGAGAAGGGCACTGGTaGTGGGAGAGCGAGGTGACT +
Preference number: 4 (lower is better)
Translates to: KGGHLFILSLWITAPFPVGEGHW*WESEVT
Trigger: AGTCACCTCGCTCTCCCAGCACCAGTGCCCTTCTCC...GACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCCTCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GAGGGTGAGATTCCTGTCATCCCCAATCCAGATCAAGTCAAGCCTCACAGGGTGTTGACGACAGCAGTCTaGCTGGCCAGCACTCCGAGG +
Preference number: 4 (lower is better)
Translates to: EGEIPVIPNPDQVKPHRVLTTAV*LASTPR
Trigger: CCTCGGAGTGCTGGCCAGCCAGACTGCTGTCGTCAA...CACCCTGTGAGGCTTGACTTGATCTGGATTGGGGATGACAGGAATCTCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGGCTGGCGAGCTGAGTTaGTGGCCACGCAGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: VRQALETLSECVIKGWAMAGELS*WPRSGR
Trigger: CCTACCGCTGCGTGGCCACCAACTCAGCTCGCCAGC...CATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp CTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCAGCGTGCGGGGCTTGTTaGCGCGGCAGACATAGACGC +
Preference number: 4 (lower is better)
Translates to: LYDLDPSMENPWIPIPKAACGAC*RGRHRR
Trigger: GCGTCTATGTCTGCCGCGCCAACAAGCCCCGCACGC...TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGTGTGTGCACCAGTGCTaGGGTGGAGGTGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VRQALETLSECVIKGWAMCVHQC*GGGAAG
Trigger: GCCAGCCGCACCTCCACCCCAGCACTGGTGCACACA...CATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp CTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCAGGTGGAGGACAGGCCTaGGAGGGATTCCCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LYDLDPSMENPWIPIPKAGGGQA*EGFPVG
Trigger: CCCCACAGGGAATCCCTCCCAGGCCTGTCCTCCACC...TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGTGCAAAGACCTCCTTGCCAGCACCCCAGAGGGTGAGATTCCTGTCATCCCCATGTGTAATAAAAGGCTaGGCGATGGAGGTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: CAKTSLPAPQRVRFLSSPCVIKG*AMEVGA
Trigger: GGCCCCCACCTCCATCGCCCAGCCTTTTATTACACA...TGGGGATGACAGGAATCTCACCCTCTGGGGTGCTGGCAAGGAGGTCTTTGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp TGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGAAGTGCTGGCGAGCTaGGTTGGTGGCCACGCAGCG +
Preference number: 4 (lower is better)
Translates to: CQTGIGDTLRVCNKRLGDEVLAS*VGGHAA
Trigger: CGCTGCGTGGCCACCAACTCAGCTCGCCAGCACTTC...ATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GAGGGTGAGATTCCTGTCATCCCCAATCCAGATCAAGTCAAGCCTCACAGGGTGGGATGTGGAGCTGTTTaGTTCCGCATGGACGTGGGC +
Preference number: 4 (lower is better)
Translates to: EGEIPVIPNPDQVKPHRVGCGAV*FRMDVG
Trigger: GCCCACGTCCATGCGGAATCAAACAGCTCCACATCC...CACCCTGTGAGGCTTGACTTGATCTGGATTGGGGATGACAGGAATCTCACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp AATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGATCTTCTCCACACCCGCACTGTGTTTCCCTGCGTGGTaGGCAAGGTCCACTGGTGCT +
Preference number: 4 (lower is better)
Translates to: NPKGKMQGSQKIFSTPALCFPAW*ARSTGA
Trigger: AGCACCAGTGGACCTTGCTCACCACGCAGGGAAACA...CAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCTCAAACTGCGCGCCCCCATCTTaGAGAAGTACCGAGTGTCGC +
Preference number: 4 (lower is better)
Translates to: GHLFILSLWITAPFPVSNCAPPS*RSTECR
Trigger: GCGACACTCGGTACTTCTTCAAGATGGGGGCGCGCA...GTTTGAGACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp CAAACTGAAATGAGCTACCCCTTTTCCTGTGCAAAGACCTCCTTGCCAGCACCCGAGGGCAGGGGGATTTaGGCTGGCAGCTATCTCCAG +
Preference number: 4 (lower is better)
Translates to: QTEMSYPFSCAKTSLPAPEGRGI*AGSYLQ
Trigger: CTGGAGATAGCTGCCAGCTCAAATCCCCCTGCCCTC...GGGTGCTGGCAAGGAGGTCTTTGCACAGGAAAAGGGGTAGCTCATTTCAGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp CAAACTGAAATGAGCTACCCCTTTTCCTGTGCAAAGACCTCCTTGCCAGCACCCGCCTCCTGGCTGAAGTaGTGGCGAGCTGAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: QTEMSYPFSCAKTSLPAPASWLK*WRAELV
Trigger: CACCAACTCAGCTCGCCAGCACTTCAGCCAGGAGGC...GGGTGCTGGCAAGGAGGTCTTTGCACAGGAAAAGGGGTAGCTCATTTCAGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATACGGAGCTCAGCGGCTaGAGTGGCGAAGTCGCGCGT +
Preference number: 4 (lower is better)
Translates to: CQTGIGDTLRVCNKRLGDTELSG*SGEVAR
Trigger: ACGCGCGACTTCGCCACTGCAGCCGCTGAGCTCCGT...ATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp GAGGGTGAGATTCCTGTCATCCCCAATCCAGATCAAGTCAAGCCTCACAGGGTGGATAGGCATGTCTGGTaGCGGCGCCTTCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: EGEIPVIPNPDQVKPHRVDRHVW*RRLLRL
Trigger: AAGACGGAGAAGGCGCCGGCACCAGACATGCCTATC...CACCCTGTGAGGCTTGACTTGATCTGGATTGGGGATGACAGGAATCTCACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp AAGGGAGGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCAGCGTGATCACATCCTaGAGGCGGGAGAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: KGGHLFILSLWITAPFPVSVITS*RREKGP
Trigger: TGGGCCTTTCTCCCGCCTGCAGGATGTGATCACGCT...GACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCCTCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TGCCTGGGCCACGGTTTCCCAGCTCAACAACCAGTACGCATACATGCACTTCACCATTCAGAGCCTGCTTaGACCCAACCCAGCCAGACA +
Preference number: 4 (lower is better)
Translates to: CLGHGFPAQQPVRIHALHHSEPA*TQPSQT
Trigger: TGTCTGGCTGGGTTGGGTGCAAGCAGGCTCTGAATG...GTGAAGTGCATGTATGCGTACTGGTTGTTGAGCTGGGAAACCGTGGCCCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp AATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGATCTTCTCCACACCCGCACTGCAGGCATTCAGAGCCTaGTTGCACCCAACCCAGCCA +
Preference number: 4 (lower is better)
Translates to: NPKGKMQGSQKIFSTPALQAFRA*LHPTQP
Trigger: TGGCTGGGTTGGGTGCAAGCAGGCTCTGAATGCCTG...CAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGCCTGGGCCACGGTTTCCCAGCTCAACAACCAGTACGCATACATGCACTTCACACTCGTCACTGCCATTaGGTGCTAGTGGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: CLGHGFPAQQPVRIHALHTRHCH*VLVAGT
Trigger: TGTCCCAGCCACTAGCACCCAATGGCAGTGACGAGT...GTGAAGTGCATGTATGCGTACTGGTTGTTGAGCTGGGAAACCGTGGCCCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GACATACACGGCCACAGGTATCGCATCCTATGTGATCCATACCTGCCTGCCCCACACTGTGGTGTTCTCTaGGGCTGCCACAATGACCAC +
Preference number: 4 (lower is better)
Translates to: DIHGHRYRILCDPYLPAPHCGVL*GCHNDH
Trigger: GTGGTCATTGTGGCAGCCCCAGAGAACACCACAGTG...TGGGGCAGGCAGGTATGGATCACATAGGATGCGATACCTGTGGCCGTGTATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp AATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGATCTTCTCCACACCCGCACTGGCTGGGGTGCTGCACTaGGGACATCATCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: NPKGKMQGSQKIFSTPALAGVLH*GHHPVC
Trigger: ACACACTGGATGATGTCCCCAGTGCAGCACCCCAGC...CAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp CTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGTGCAGCCGAACCGTaGACGGTGTCAGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LYDLDPSMENPWIPIPKASAAEP*TVSGGS
Trigger: TGAGCCCCCTGACACCGTCCACGGTTCGGCTGCACT...TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GACATACACGGCCACAGGTATCGCATCCTATGTGATCCATACCTGCCTGCCCCATGCTCAGGCTGCGTGTaGTTGCTGCTGTACAGGATC +
Preference number: 4 (lower is better)
Translates to: DIHGHRYRILCDPYLPAPCSGCV*LLLYRI
Trigger: GATCCTGTACAGCAGCAACCACACGCAGCCTGAGCA...TGGGGCAGGCAGGTATGGATCACATAGGATGCGATACCTGTGGCCGTGTATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GACATACACGGCCACAGGTATCGCATCCTATGTGATCCATACCTGCCTGCCCCATCGCTCTCCAGGCCATaGACCTCAGCACTGAAGATG +
Preference number: 4 (lower is better)
Translates to: DIHGHRYRILCDPYLPAPSLSRP*TSALKM
Trigger: CATCTTCAGTGCTGAGGTCCATGGCCTGGAGAGCGA...TGGGGCAGGCAGGTATGGATCACATAGGATGCGATACCTGTGGCCGTGTATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp CTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCAGAGATCAGGAGCCTCTaGAGGCAGGGGGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LYDLDPSMENPWIPIPKAEIRSL*RQGVLR
Trigger: CCTGAGGACCCCCTGCCTCCAGAGGCTCCTGATCTC...TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp ATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGAAGGAGCAGGAAGCACTaGCTGCCTCTGGCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: MENPWIPIPKARCREARRRSRKH*LPLASR
Trigger: CCTGCTTGCCAGAGGCAGCCAGTGCTTCCTGCTCCT...TCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp TGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGCTTCTCCTGGAGCGTaGTCACATCCTGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: CQTGIGDTLRVCNKRLGDASPGA*SHPAGG
Trigger: CCCGCCTGCAGGATGTGATCACGCTCCAGGAGAAGC...ATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp TCTTCCTTTAGCTTCTTCTGGAAGAGAGGCCCAAATCATCTCCATCCAGTAAACCCTGTCCTCCACGTCTaGGGGTGGCGGGGACCAGTC +
Preference number: 4 (lower is better)
Translates to: SSFSFFWKRGPNHLHPVNPVLHV*GWRGPV
Trigger: GACTGGTCCCCGCCACCCTCAGACGTGGAGGACAGG...GTTTACTGGATGGAGATGATTTGGGCCTCTCTTCCAGAAGAAGCTAAAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GAGGGTGAGATTCCTGTCATCCCCAATCCAGATCAAGTCAAGCCTCACAGGGTGCTCAGCCCGCTTGGTTaGGCCCAGGAGATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: EGEIPVIPNPDQVKPHRVLSPLG*AQEIFL
Trigger: AAGAAAGATCTCCTGGGCTCAACCAAGCGGGCTGAG...CACCCTGTGAGGCTTGACTTGATCTGGATTGGGGATGACAGGAATCTCACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GACATACACGGCCACAGGTATCGCATCCTATGTGATCCATACCTGCCTGCCCCAGATGCTTTCAGGGTTTaGGGAAGCCGCAACTGTGCT +
Preference number: 4 (lower is better)
Translates to: DIHGHRYRILCDPYLPAPDAFRV*GSRNCA
Trigger: AGCACAGTTGCGGCTTCCTCAAACCCTGAAAGCATC...TGGGGCAGGCAGGTATGGATCACATAGGATGCGATACCTGTGGCCGTGTATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp GGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCTCAAACGAGAAGCCGATGATCTaGTCGCTGTGCATCTCGGGC +
Preference number: 4 (lower is better)
Translates to: GHLFILSLWITAPFPVSNEKPMI*SLCISG
Trigger: GCCCGAGATGCACAGCGAGCAGATCATCGGCTTCTC...GTTTGAGACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TTCCCCTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAGGAGAGCTGGGGTGCTaGACTGGGGACATCATCCAG +
Preference number: 4 (lower is better)
Translates to: FPSMTWIHPWRTLGSQSQGELGC*TGDIIQ
Trigger: CTGGATGATGTCCCCAGTGCAGCACCCCAGCTCTCC...TTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp ATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGAGCGCCTTCTCCGTCTTaGCCTTCCACACTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: MENPWIPIPKARCREARRAPSPS*PSTLLH
Trigger: ATGCAGCAGTGTGGAAGGGCAAGACGGAGAAGGCGC...TCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TGTGCAAAGACCTCCTTGCCAGCACCCCAGAGGGTGAGATTCCTGTCATCCCCAGCTGCGTGTGGTTGCTaGTGTACAGGATCAGATACT +
Preference number: 4 (lower is better)
Translates to: CAKTSLPAPQRVRFLSSPAACGC*CTGSDT
Trigger: AGTATCTGATCCTGTACAGCAGCAACCACACGCAGC...TGGGGATGACAGGAATCTCACCCTCTGGGGTGCTGGCAAGGAGGTCTTTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp AAGGGAGGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCTCCTGGGGATGGGGGTaGACAAGGGACTCCAATTCA +
Preference number: 4 (lower is better)
Translates to: KGGHLFILSLWITAPFPVSWGWG*TRDSNS
Trigger: TGAATTGGAGTCCCTTGTGCACCCCCATCCCCAGGA...GACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCCTCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp AATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGATCTTCTCCACACCCGCACTGGCCACAGGGAACCATTaGGCAGCAGGTGTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: NPKGKMQGSQKIFSTPALATGNH*AAGVSG
Trigger: ACCACTTACACCTGCTGCCCAATGGTTCCCTGTGGC...CAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp AAGGGAGGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCGGCAGCCCTTCAATGTaGCACTCAAAGCGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: KGGHLFILSLWITAPFPVGSPSM*HSKRAV
Trigger: GACAGCTCGCTTTGAGTGCCACATTGAAGGGCTGCC...GACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCCTCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp CTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCATCCTGGCTGAAGTGCTaGCGAGCTGAGTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LYDLDPSMENPWIPIPKASWLKC*RAELVA
Trigger: GGCCACCAACTCAGCTCGCCAGCACTTCAGCCAGGA...TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp CAAACTGAAATGAGCTACCCCTTTTCCTGTGCAAAGACCTCCTTGCCAGCACCCGCCAGGGCTGCGCGTTaGCAATTAGTAGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: QTEMSYPFSCAKTSLPAPARAAR*QLVGWC
Trigger: GCACCAACCTACTAATTGCCAACGCGCAGCCCTGGC...GGGTGCTGGCAAGGAGGTCTTTGCACAGGAAAAGGGGTAGCTCATTTCAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGCCTGGGCCACGGTTTCCCAGCTCAACAACCAGTACGCATACATGCACTTCACGGGGCAAAAGGGACATaGCTCTGGTTGTGCATACTG +
Preference number: 4 (lower is better)
Translates to: CLGHGFPAQQPVRIHALHGAKGT*LWLCIL
Trigger: CAGTATGCACAACCAGAGCCATGTCCCTTTTGCCCC...GTGAAGTGCATGTATGCGTACTGGTTGTTGAGCTGGGAAACCGTGGCCCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TCTTCCTTTAGCTTCTTCTGGAAGAGAGGCCCAAATCATCTCCATCCAGTAAACGTCTCCACGGCCCCCTaGCAGGCGATCGCCATTGGC +
Preference number: 4 (lower is better)
Translates to: SSFSFFWKRGPNHLHPVNVSTAP*QAIAIG
Trigger: GCCAATGGCGATCGCCTGCCAGGGGGCCGTGGAGAC...GTTTACTGGATGGAGATGATTTGGGCCTCTCTTCCAGAAGAAGCTAAAGGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGCTGGATAGGCATGTCTaGTGCCGGCGCCTTCTCCGT +
Preference number: 4 (lower is better)
Translates to: VRQALETLSECVIKGWAMLDRHV*CRRLLR
Trigger: ACGGAGAAGGCGCCGGCACCAGACATGCCTATCCAG...CATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp CAAACTGAAATGAGCTACCCCTTTTCCTGTGCAAAGACCTCCTTGCCAGCACCCCTGTTTGATTCCGCATaGACGTGGGCTGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QTEMSYPFSCAKTSLPAPLFDSA*TWAGGR
Trigger: CCTGCCTCCAGCCCACGTCCATGCGGAATCAAACAG...GGGTGCTGGCAAGGAGGTCTTTGCACAGGAAAAGGGGTAGCTCATTTCAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp CAAACTGAAATGAGCTACCCCTTTTCCTGTGCAAAGACCTCCTTGCCAGCACCCCCAGCTCAGCCCGCTTaGTTGAGCCCAGGAGATCTT +
Preference number: 4 (lower is better)
Translates to: QTEMSYPFSCAKTSLPAPPAQPA*LSPGDL
Trigger: AAGATCTCCTGGGCTCAACCAAGCGGGCTGAGCTGG...GGGTGCTGGCAAGGAGGTCTTTGCACAGGAAAAGGGGTAGCTCATTTCAGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGCCTGGGCCACGGTTTCCCAGCTCAACAACCAGTACGCATACATGCACTTCACTCCCATTGCCCTTTATaGCGTCGTACACCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: CLGHGFPAQQPVRIHALHSHCPL*RRTPEP
Trigger: AGGCTCTGGTGTACGACGCCATAAAGGGCAATGGGA...GTGAAGTGCATGTATGCGTACTGGTTGTTGAGCTGGGAAACCGTGGCCCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGGTAGTGACCACTGCCTaGGCCACGGTTTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: VRQALETLSECVIKGWAMVVTTA*ATVSQL
Trigger: GAGCTGGGAAACCGTGGCCCAGGCAGTGGTCACTAC...CATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR CAA 72 bp AACCCAGCCAGACAGGAGAATGGGCTGGGACTGTCTTaGTCAGACAGGCATTGGAGACACTCTCAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: NPARQENGLGLS*SDRHWRHSQSV
Trigger: CACACTCTGAGAGTGTCTCCAATGCCTGTCTGACAAAGACAGTCCCAGCCCATTCTCCTGTCTGGCTGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCTCAAACGCTTCACTTTCTTCTTaGGCCGGACAGGCCCCACAT +
Preference number: 4 (lower is better)
Translates to: GHLFILSLWITAPFPVSNASLSS*AGQAPH
Trigger: ATGTGGGGCCTGTCCGGCTCAAGAAGAAAGTGAAGC...GTTTGAGACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp ATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGACATGGACCTCAGCACTaGAGATGTTTCCCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: MENPWIPIPKARCREARRHGPQH*RCFPAW
Trigger: CCACGCAGGGAAACATCTTCAGTGCTGAGGTCCATG...TCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TTCCCCTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGTGTAAGTGGTCGTaGTCCAGCAGGGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: FPSMTWIHPWRTLGSQSQRCKWS*SSRVSP
Trigger: TGGGGACACCCTGCTGGAGCACGACCACTTACACCT...TTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATATGATCTGCTCGCTGTaGATCTCGGGCCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: CQTGIGDTLRVCNKRLGDMICSL*ISGRSQ
Trigger: CTGGGAGCGGCCCGAGATGCACAGCGAGCAGATCAT...ATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp AATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGATCTTCTCCACACCCGCACTGCAGGGACTCCATCTTTaGCTGCACCTTCAACTCTGC +
Preference number: 4 (lower is better)
Translates to: NPKGKMQGSQKIFSTPALQGLHL*LHLQLC
Trigger: GCAGAGTTGAAGGTGCAGGCAAAGATGGAGTCCCTG...CAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TTCCCCTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAACACTGGTGCTCAGGCTaGGTGTGGTTGCTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: FPSMTWIHPWRTLGSQSQHWCSG*VWLLLY
Trigger: GTACAGCAGCAACCACACGCAGCCTGAGCACCAGTG...TTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp CTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGCAAGGTCCACTGGTaGTCAGGCTGCGTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LYDLDPSMENPWIPIPKASKVHW*SGCVWL
Trigger: CAACCACACGCAGCCTGAGCACCAGTGGACCTTGCT...TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TTCCCCTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAATCGTACACCAGAGCCTaGAGCAACAGCGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: FPSMTWIHPWRTLGSQSQSYTRA*SNSVCP
Trigger: TGGGCAGACGCTGTTGCTGCAGGCTCTGGTGTACGA...TTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TGTGCAAAGACCTCCTTGCCAGCACCCCAGAGGGTGAGATTCCTGTCATCCCCAAGGGTTCCCGTTAGATaGACTAAAGTCAGAGTGGAC +
Preference number: 4 (lower is better)
Translates to: CAKTSLPAPQRVRFLSSPRVPVR*TKVRVD
Trigger: GTCCACTCTGACTTTAGTGCATCTAACGGGAACCCT...TGGGGATGACAGGAATCTCACCCTCTGGGGTGCTGGCAAGGAGGTCTTTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGGCTGTAGTGACCACTaGCTGGGCCACGGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: CQTGIGDTLRVCNKRLGDGCSDH*LGHGFP
Trigger: TGGGAAACCGTGGCCCAGGCAGTGGTCACTACAGCC...ATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TTCCCCTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAACAGGATCACTTGCAGTaGCCCCACTCCACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: FPSMTWIHPWRTLGSQSQQDHLQ*PHSTAQ
Trigger: CTGAGCTGTGGAGTGGGGCCACTGCAAGTGATCCTG...TTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGGCAGCAGGTGTAAGTaGTCGTGCTCCAGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CQTGIGDTLRVCNKRLGDGSRCK*SCSSRV
Trigger: CACCCTGCTGGAGCACGACCACTTACACCTGCTGCC...ATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGTGCAAAGACCTCCTTGCCAGCACCCCAGAGGGTGAGATTCCTGTCATCCCCAGAAGCCAGATGGATGTaGAGCTGTTTGATTCCGCAT +
Preference number: 4 (lower is better)
Translates to: CAKTSLPAPQRVRFLSSPEARWM*SCLIPH
Trigger: ATGCGGAATCAAACAGCTCCACATCCATCTGGCTTC...TGGGGATGACAGGAATCTCACCCTCTGGGGTGCTGGCAAGGAGGTCTTTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGTGCAAAGACCTCCTTGCCAGCACCCCAGAGGGTGAGATTCCTGTCATCCCCAGACTGTGGTGAAATCTaGCTTTTTCCACCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: CAKTSLPAPQRVRFLSSPDCGEI*LFPPKP
Trigger: TGGCTTCGGTGGAAAAAGCCAGATTTCACCACAGTC...TGGGGATGACAGGAATCTCACCCTCTGGGGTGCTGGCAAGGAGGTCTTTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TTCCCCTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAACAGGGGGATTTGAGCTaGCAGCTATCTCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: FPSMTWIHPWRTLGSQSQQGDLS*QLSPGV
Trigger: GACCCCTGGAGATAGCTGCCAGCTCAAATCCCCCTG...TTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp AATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGATCTTCTCCACACCCGCACTGAGCCAGACAGGAGAATaGGCTGGGACTGTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: NPKGKMQGSQKIFSTPALSQTGE*AGTVFV
Trigger: GACAAAGACAGTCCCAGCCCATTCTCCTGTCTGGCT...CAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGTGCAAAGACCTCCTTGCCAGCACCCCAGAGGGTGAGATTCCTGTCATCCCCATTCCCCTCTATGACTTaGATCCATCCATGGAGAACC +
Preference number: 4 (lower is better)
Translates to: CAKTSLPAPQRVRFLSSPFPSMT*IHPWRT
Trigger: GGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAA...TGGGGATGACAGGAATCTCACCCTCTGGGGTGCTGGCAAGGAGGTCTTTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp ATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGAAGGAGGGGGAGGAGGTaGAAACGTAGGTGCAGACAT +
Preference number: 4 (lower is better)
Translates to: MENPWIPIPKARCREARRRRGRR*KRRCRH
Trigger: ATGTCTGCACCTACGTTTCCACCTCCTCCCCCTCCT...TCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp TGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGATGATGCCCGTGACTaGGTGCATGTCCAGCGAGTC +
Preference number: 4 (lower is better)
Translates to: CQTGIGDTLRVCNKRLGDDDARD*VHVQRV
Trigger: GACTCGCTGGACATGCACTCAGTCACGGGCATCATC...ATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TTCCCCTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAGGACTGACTCGTCACTaGCATTGGGTGCTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: FPSMTWIHPWRTLGSQSQGLTRH*HWVLVA
Trigger: AGCCACTAGCACCCAATGGCAGTGACGAGTCAGTCC...TTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp CAAACTGAAATGAGCTACCCCTTTTCCTGTGCAAAGACCTCCTTGCCAGCACCCATTGTCCATGCCCCGTaGCTTCTGGTAGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: QTEMSYPFSCAKTSLPAPIVHAP*LLVVER
Trigger: TCTCTCCACTACCAGAAGGCACGGGGCATGGACAAT...GGGTGCTGGCAAGGAGGTCTTTGCACAGGAAAAGGGGTAGCTCATTTCAGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp GACATACACGGCCACAGGTATCGCATCCTATGTGATCCATACCTGCCTGCCCCAGCCGTGAGACTGCACTaGAAACTCGTATTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: DIHGHRYRILCDPYLPAPAVRLH*KLVFGE
Trigger: TTCACCAAATACGAGTTTGCAGTGCAGTCTCACGGC...TGGGGCAGGCAGGTATGGATCACATAGGATGCGATACCTGTGGCCGTGTATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp ACACATGTGCACATCACATGTAGCTATGTCTCGTATGTCTTTCACATGTCACATGCACCAGTGCTGGGGTaGAGGTGCGGCTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: THVHITCSYVSYVFHMSHAPVLG*RCGWLP
Trigger: TGGGAGCCAGCCGCACCTCCACCCCAGCACTGGTGC...ATGTGACATGTGAAAGACATACGAGACATAGCTACATGTGATGTGCACATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCTCAAACTCTGGTTGTGCATACTaGGCGTCCTGTGATGCATCC +
Preference number: 4 (lower is better)
Translates to: GHLFILSLWITAPFPVSNSGCAY*ASCDAS
Trigger: GGATGCATCACAGGACGCCCAGTATGCACAACCAGA...GTTTGAGACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TTCCCCTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAATCAGGCTCCAGGTCTTaGAGATGGAGGTCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: FPSMTWIHPWRTLGSQSQSGSRS*RWRSGF
Trigger: GAACCCTGACCTCCATCTCCAAGACCTGGAGCCTGA...TTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGGGCACCGTTCTGACCTaGAGGACCAATCAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: VRQALETLSECVIKGWAMGTVLT*RTNQAV
Trigger: TACAGCCTGATTGGTCCTCCAGGTCAGAACGGTGCC...CATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGCCTGGGCCACGGTTTCCCAGCTCAACAACCAGTACGCATACATGCACTTCACTTGTCAGACAGGCATTaGAGACACTCTCAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: CLGHGFPAQQPVRIHALHLSDRH*RHSQSV
Trigger: CACACTCTGAGAGTGTCTCCAATGCCTGTCTGACAA...GTGAAGTGCATGTATGCGTACTGGTTGTTGAGCTGGGAAACCGTGGCCCAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GAGGGTGAGATTCCTGTCATCCCCAATCCAGATCAAGTCAAGCCTCACAGGGTGGACAGGAGAATGGGCTaGGACTGTCTTTGTCAGACA +
Preference number: 4 (lower is better)
Translates to: EGEIPVIPNPDQVKPHRVDRRMG*DCLCQT
Trigger: TGTCTGACAAAGACAGTCCCAGCCCATTCTCCTGTC...CACCCTGTGAGGCTTGACTTGATCTGGATTGGGGATGACAGGAATCTCACCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp ATACACAGTGGTGTTAGCCACAGCAGCGCTGAATGCTACAGAAATACTACAAGTGAAGGGCACTGGTGCTaGGAGAGCGAGGTGACTGGG +
Preference number: 4 (lower is better)
Translates to: IHSGVSHSSAECYRNTTSEGHWC*ESEVTG
Trigger: CCCAGTCACCTCGCTCTCCCAGCACCAGTGCCCTTC...ACTTGTAGTATTTCTGTAGCATTCAGCGCTGCTGTGGCTAACACCACTGTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GACATACACGGCCACAGGTATCGCATCCTATGTGATCCATACCTGCCTGCCCCAACTTGGATCCATCCATaGAGAACCCTTGGATCCCAA +
Preference number: 4 (lower is better)
Translates to: DIHGHRYRILCDPYLPAPTWIHP*RTLGSQ
Trigger: TTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGT...TGGGGCAGGCAGGTATGGATCACATAGGATGCGATACCTGTGGCCGTGTATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp TCTTCCTTTAGCTTCTTCTGGAAGAGAGGCCCAAATCATCTCCATCCAGTAAACATACTGGGCGTCCTGTaGTGCATCCACTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SSFSFFWKRGPNHLHPVNILGVL*CIHWEG
Trigger: CCCCTCCCAGTGGATGCATCACAGGACGCCCAGTAT...GTTTACTGGATGGAGATGATTTGGGCCTCTCTTCCAGAAGAAGCTAAAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GAGGGTGAGATTCCTGTCATCCCCAATCCAGATCAAGTCAAGCCTCACAGGGTGCAAACTCGTATTTGGTaGATGGCTTCAAGCCGCCAA +
Preference number: 4 (lower is better)
Translates to: EGEIPVIPNPDQVKPHRVQTRIW*MASSRQ
Trigger: TTGGCGGCTTGAAGCCATTCACCAAATACGAGTTTG...CACCCTGTGAGGCTTGACTTGATCTGGATTGGGGATGACAGGAATCTCACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGAGTCTGGGAGAGGTGTaGGAGATAGCAGAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: VRQALETLSECVIKGWAMSLGEV*EIAEEG
Trigger: TCCTTCCTCTGCTATCTCTCACACCTCTCCCAGACT...CATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp CTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCATCCCTGTGCGGCAGGTaGACAGAAAATGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: LYDLDPSMENPWIPIPKASLCGR*TENDLR
Trigger: CCTCAAGTCATTTTCTGTTCACCTGCCGCACAGGGA...TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TCTTCCTTTAGCTTCTTCTGGAAGAGAGGCCCAAATCATCTCCATCCAGTAAACCCGGAGTGCCAGGGCTaGGCGTTGGCAATTAGTAGG +
Preference number: 4 (lower is better)
Translates to: SSFSFFWKRGPNHLHPVNPECQG*ALAISR
Trigger: CCTACTAATTGCCAACGCGCAGCCCTGGCACTCCGG...GTTTACTGGATGGAGATGATTTGGGCCTCTCTTCCAGAAGAAGCTAAAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp GTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGCTGCACCTTCAACTCTaGAGGGGCAAAAGGGACATG +
Preference number: 4 (lower is better)
Translates to: VRQALETLSECVIKGWAMLHLQL*RGKRDM
Trigger: CATGTCCCTTTTGCCCCTGCAGAGTTGAAGGTGCAG...CATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp GTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGCTGAAGATGTTTCCCTaGGTGGTGAGCAAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: VRQALETLSECVIKGWAMLKMFP*VVSKVH
Trigger: GTGGACCTTGCTCACCACGCAGGGAAACATCTTCAG...CATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp AATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGATCTTCTCCACACCCGCACTGGACCCTAACATTCTATaGTCCTATGAGAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: NPKGKMQGSQKIFSTPALDPNIL*SYERAE
Trigger: CTCAGCCCTCTCATAGGAGCATAGAATGTTAGGGTC...CAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGGCCACCCTCTCTATTTaGGCAATAAGGAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: VRQALETLSECVIKGWAMATLSI*AIRSWE
Trigger: CTCCCAGCTCCTTATTGCCCAAATAGAGAGGGTGGC...CATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp ATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGATCCATGGAGAACCCTTaGATCCCAATCCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: MENPWIPIPKARCREARRSMENP*IPIPKA
Trigger: TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGA...TCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp CTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGTGTTATCATAGGCTaGCTGAAGGAGGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LYDLDPSMENPWIPIPKASVIIG*LKEGEE
Trigger: CTCCTCCCCCTCCTTCAGCCAGCCTATGATAACACT...TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GAGGGTGAGATTCCTGTCATCCCCAATCCAGATCAAGTCAAGCCTCACAGGGTGATCTTTCTTTTGGAGTaGCTCCGGCCTTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: EGEIPVIPNPDQVKPHRVIFLLE*LRPSET
Trigger: TGTTTCTGAAGGCCGGAGTCACTCCAAAAGAAAGAT...CACCCTGTGAGGCTTGACTTGATCTGGATTGGGGATGACAGGAATCTCACCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp ACACATGTGCACATCACATGTAGCTATGTCTCGTATGTCTTTCACATGTCACATCCTGCAGGCTGGGGGTaGCTTCTTCCTCCCATTGCC +
Preference number: 4 (lower is better)
Translates to: THVHITCSYVSYVFHMSHPAGWG*LLPPIA
Trigger: GGCAATGGGAGGAAGAAGTCACCCCCAGCCTGCAGG...ATGTGACATGTGAAAGACATACGAGACATAGCTACATGTGATGTGCACATGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp CTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCAGGCATCTTTTTATTCTaGGCCTCTGGATCACAGCCC +
Preference number: 4 (lower is better)
Translates to: LYDLDPSMENPWIPIPKAGIFLF*ASGSQP
Trigger: GGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCC...TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TCTTCCTTTAGCTTCTTCTGGAAGAGAGGCCCAAATCATCTCCATCCAGTAAACGCAGCGGTAGGGGCCTaGATCACTCTCCTGAACATC +
Preference number: 4 (lower is better)
Translates to: SSFSFFWKRGPNHLHPVNAAVGA*ITLLNI
Trigger: GATGTTCAGGAGAGTGATGCAGGCCCCTACCGCTGC...GTTTACTGGATGGAGATGATTTGGGCCTCTCTTCCAGAAGAAGCTAAAGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TTCCCCTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAGCCCTTCCACACTGCTaGATAGCCATCCTCATGTTT +
Preference number: 4 (lower is better)
Translates to: FPSMTWIHPWRTLGSQSQALPHC*IAILMF
Trigger: AAACATGAGGATGGCTATGCAGCAGTGTGGAAGGGC...TTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp CAAACTGAAATGAGCTACCCCTTTTCCTGTGCAAAGACCTCCTTGCCAGCACCCACTTCTTCCTCCCATTaGCCTTTATGGCGTCGTACA +
Preference number: 4 (lower is better)
Translates to: QTEMSYPFSCAKTSLPAPTSSSH*PLWRRT
Trigger: TGTACGACGCCATAAAGGGCAATGGGAGGAAGAAGT...GGGTGCTGGCAAGGAGGTCTTTGCACAGGAAAAGGGGTAGCTCATTTCAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp CAAACTGAAATGAGCTACCCCTTTTCCTGTGCAAAGACCTCCTTGCCAGCACCCATCCCAAAGGCAAGATaGAGGGAAGCCAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: QTEMSYPFSCAKTSLPAPIPKAR*REARRS
Trigger: AGATCTTCTGGCTTCCCTGCATCTTGCCTTTGGGAT...GGGTGCTGGCAAGGAGGTCTTTGCACAGGAAAAGGGGTAGCTCATTTCAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp ACACATGTGCACATCACATGTAGCTATGTCTCGTATGTCTTTCACATGTCACATTCCACAGTCGTCTCCTaGGGCAACAGCAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: THVHITCSYVSYVFHMSHSTVVS*GNSSSP
Trigger: CGGGGAGCTGCTGTTGCCCCAGGAGACGACTGTGGA...ATGTGACATGTGAAAGACATACGAGACATAGCTACATGTGATGTGCACATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp ATACACAGTGGTGTTAGCCACAGCAGCGCTGAATGCTACAGAAATACTACAAGTAGGACACAAAAGGGGTaGGGTCAGCTGAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: IHSGVSHSSAECYRNTTSRTQKG*GQLRPH
Trigger: GTGTGGCCTCAGCTGACCCCACCCCTTTTGTGTCCT...ACTTGTAGTATTTCTGTAGCATTCAGCGCTGCTGTGGCTAACACCACTGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp ACACATGTGCACATCACATGTAGCTATGTCTCGTATGTCTTTCACATGTCACATAGCGGAGCTGCTCAGTaGCGTAGCAGTGACCCGCGT +
Preference number: 4 (lower is better)
Translates to: THVHITCSYVSYVFHMSHSGAAQ*RSSDPR
Trigger: ACGCGGGTCACTGCTACGCCACTGAGCAGCTCCGCT...ATGTGACATGTGAAAGACATACGAGACATAGCTACATGTGATGTGCACATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp ATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGACTCGTATTTGGTGAATaGCTTCAAGCCGCCAATGAG +
Preference number: 4 (lower is better)
Translates to: MENPWIPIPKARCREARRLVFGE*LQAANE
Trigger: CTCATTGGCGGCTTGAAGCCATTCACCAAATACGAG...TCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCTCAAACAGGAGATCTTTCTTTTaGAGTGACTCCGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GHLFILSLWITAPFPVSNRRSFF*SDSGLQ
Trigger: CTGAAGGCCGGAGTCACTCCAAAAGAAAGATCTCCT...GTTTGAGACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGCCTGGGCCACGGTTTCCCAGCTCAACAACCAGTACGCATACATGCACTTCACTCCTTTAGCTTCTTCTaGAAGAGAGGCCCAAATCAT +
Preference number: 4 (lower is better)
Translates to: CLGHGFPAQQPVRIHALHSFSFF*KRGPNH
Trigger: ATGATTTGGGCCTCTCTTCCAGAAGAAGCTAAAGGA...GTGAAGTGCATGTATGCGTACTGGTTGTTGAGCTGGGAAACCGTGGCCCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
3UTR CAA 72 bp GGAGAATGGGCTGGGACTGTCTTTGTCAGACAGGCATaGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GEWAGTVFVRQA*ETLSECVIKGW
Trigger: CCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACAAAGACAGTCCCAGCCCATTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCTCAAACTGCAGACATCAACAGTaGGTGACACCCGAGTATAAT +
Preference number: 4 (lower is better)
Translates to: GHLFILSLWITAPFPVSNCRHQQ*VTPEYN
Trigger: ATTATACTCGGGTGTCACTCACTGTTGATGTCTGCA...GTTTGAGACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp GACATACACGGCCACAGGTATCGCATCCTATGTGATCCATACCTGCCTGCCCCACTTTCTTATCAACTGTaGGTTATAGGCAGATACCAG +
Preference number: 4 (lower is better)
Translates to: DIHGHRYRILCDPYLPAPLSYQL*VIGRYQ
Trigger: CTGGTATCTGCCTATAACTCACAGTTGATAAGAAAG...TGGGGCAGGCAGGTATGGATCACATAGGATGCGATACCTGTGGCCGTGTATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp ATACACAGTGGTGTTAGCCACAGCAGCGCTGAATGCTACAGAAATACTACAAGTACATCATCCAGTGTGTaGACCAGTGCTGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: IHSGVSHSSAECYRNTTSTSSSV*TSAGVE
Trigger: CTCCACCCCAGCACTGGTGCACACACTGGATGATGT...ACTTGTAGTATTTCTGTAGCATTCAGCGCTGCTGTGGCTAACACCACTGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp ATACACAGTGGTGTTAGCCACAGCAGCGCTGAATGCTACAGAAATACTACAAGTATGCCCGTGACTGAGTaGATGTCCAGCGAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: IHSGVSHSSAECYRNTTSMPVTE*MSSESD
Trigger: GTCAGACTCGCTGGACATGCACTCAGTCACGGGCAT...ACTTGTAGTATTTCTGTAGCATTCAGCGCTGCTGTGGCTAACACCACTGTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp ATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGAACCAGTACGCATACATaGACTTCACACATGTGCACA +
Preference number: 4 (lower is better)
Translates to: MENPWIPIPKARCREARRTSTHT*TSHMCT
Trigger: TGTGCACATGTGTGAAGTGCATGTATGCGTACTGGT...TCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TGCCTGGGCCACGGTTTCCCAGCTCAACAACCAGTACGCATACATGCACTTCACGATTACAAAATTAAATaGAGAGTTGCTCGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: CLGHGFPAQQPVRIHALHDYKIK*RVARRG
Trigger: TCCCCTCCGAGCAACTCTGCATTTAATTTTGTAATC...GTGAAGTGCATGTATGCGTACTGGTTGTTGAGCTGGGAAACCGTGGCCCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp GAGGGTGAGATTCCTGTCATCCCCAATCCAGATCAAGTCAAGCCTCACAGGGTGCACAGCAGCGCTGAATaGTACAGAAATACTACAAGT +
Preference number: 4 (lower is better)
Translates to: EGEIPVIPNPDQVKPHRVHSSAE*YRNTTS
Trigger: ACTTGTAGTATTTCTGTAGCATTCAGCGCTGCTGTG...CACCCTGTGAGGCTTGACTTGATCTGGATTGGGGATGACAGGAATCTCACCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATAGTAATGATGGGAGCTaGCAGCCCTTCAATGTGGCA +
Preference number: 4 (lower is better)
Translates to: CQTGIGDTLRVCNKRLGDSNDGS*QPFNVA
Trigger: TGCCACATTGAAGGGCTGCCAGCTCCCATCATTACT...ATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TTCCCCTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAATCAGGCAATGTCACCTaGTCCTTCTCCCAAGTAATG +
Preference number: 4 (lower is better)
Translates to: FPSMTWIHPWRTLGSQSQSGNVT*SFSQVM
Trigger: CATTACTTGGGAGAAGGACCAGGTGACATTGCCTGA...TTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp ACACATGTGCACATCACATGTAGCTATGTCTCGTATGTCTTTCACATGTCACATGGCCAGACACCACTGTaGTGTTCTCTGGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: THVHITCSYVSYVFHMSHGQTPL*CSLGLP
Trigger: TGGCAGCCCCAGAGAACACCACAGTGGTGTCTGGCC...ATGTGACATGTGAAAGACATACGAGACATAGCTACATGTGATGTGCACATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGGGACTGTCTTTGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAATCCATCACCACACTCTaGCCAGACACCACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: WDCLCQTGIGDTLRVCNKSITTL*PDTTVV
Trigger: CACCACAGTGGTGTCTGGCCAGAGTGTGGTGATGGA...TTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACAAAGACAGTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp GGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCTCAAACTCGATACACCTTGTTTaGCTGAAGCGAGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GHLFILSLWITAPFPVSNSIHLV*LKRVQH
Trigger: ATGCTGAACTCGCTTCAGCCAAACAAGGTGTATCGA...GTTTGAGACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp ATACACAGTGGTGTTAGCCACAGCAGCGCTGAATGCTACAGAAATACTACAAGTAGCACTGGCTGCCTCTaGCAAGCAGGTAAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: IHSGVSHSSAECYRNTTSSTGCL*QAGKSV
Trigger: GACAGACTTACCTGCTTGCCAGAGGCAGCCAGTGCT...ACTTGTAGTATTTCTGTAGCATTCAGCGCTGCTGTGGCTAACACCACTGTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATTGGGCAATAAGGAGCTaGGAGGTGATGCAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: CQTGIGDTLRVCNKRLGDWAIRS*EVMQLK
Trigger: TTTCAGCTGCATCACCTCCCAGCTCCTTATTGCCCA...ATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp CAAACTGAAATGAGCTACCCCTTTTCCTGTGCAAAGACCTCCTTGCCAGCACCCTCAGTAGAGAAAATCTaGTCTTCCTTTCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: QTEMSYPFSCAKTSLPAPSVEKI*SSFPKP
Trigger: CGGTTTGGGAAAGGAAGATCAGATTTTCTCTACTGA...GGGTGCTGGCAAGGAGGTCTTTGCACAGGAAAAGGGGTAGCTCATTTCAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp TGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGCCTTGAAGCAGACATaGGGTAGTCACGTTGTTAGA +
Preference number: 4 (lower is better)
Translates to: CQTGIGDTLRVCNKRLGDALKQT*GSHVVR
Trigger: TCTAACAACGTGACTACCTCATGTCTGCTTCAAGGC...ATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp ACACATGTGCACATCACATGTAGCTATGTCTCGTATGTCTTTCACATGTCACATGGCAAGCAGAAGCACTaGGTGAAGAGGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: THVHITCSYVSYVFHMSHGKQKH*VKRRQE
Trigger: CTCCTGCCTCCTCTTCACTCAGTGCTTCTGCTTGCC...ATGTGACATGTGAAAGACATACGAGACATAGCTACATGTGATGTGCACATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TCTTCCTTTAGCTTCTTCTGGAAGAGAGGCCCAAATCATCTCCATCCAGTAAACGTGCAGAGAGAAGTCTaGGAGTGTGGCAAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: SSFSFFWKRGPNHLHPVNVQREV*ECGKLD
Trigger: GTCAAGCTTGCCACACTCGCAGACTTCTCTCTGCAC...GTTTACTGGATGGAGATGATTTGGGCCTCTCTTCCAGAAGAAGCTAAAGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TGGGACTGTCTTTGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAGTGATGCAGCTGAAATaGCAGGCATTCAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: WDCLCQTGIGDTLRVCNKVMQLK*QAFRAC
Trigger: GCAGGCTCTGAATGCCTGGCATTTCAGCTGCATCAC...TTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACAAAGACAGTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATACTCATAATCTGTGTTaGGTTCCAGGTCCCGAACCT +
Preference number: 4 (lower is better)
Translates to: CQTGIGDTLRVCNKRLGDTHNLC*VPGPEP
Trigger: AGGTTCGGGACCTGGAACCCAACACAGATTATGAGT...ATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGGGACTGTCTTTGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAAAGGGACATGGCTCTaGTTGTGCATACTGGGCGTC +
Preference number: 4 (lower is better)
Translates to: WDCLCQTGIGDTLRVCNKKGTWL*LCILGV
Trigger: GACGCCCAGTATGCACAACCAGAGCCATGTCCCTTT...TTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACAAAGACAGTCCCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATTCCACCGAAGCCAGATaGATGTGGAGCTGTTTGATT +
Preference number: 4 (lower is better)
Translates to: CQTGIGDTLRVCNKRLGDSTEAR*MWSCLI
Trigger: AATCAAACAGCTCCACATCCATCTGGCTTCGGTGGA...ATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp CTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCAGACATCAACAGTGAGTaGCACCCGAGTATAATAAAC +
Preference number: 4 (lower is better)
Translates to: LYDLDPSMENPWIPIPKADINSE*HPSIIN
Trigger: GTTTATTATACTCGGGTGTCACTCACTGTTGATGTC...TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TCTTCCTTTAGCTTCTTCTGGAAGAGAGGCCCAAATCATCTCCATCCAGTAAACTATGTGATCCATACCTaGCTGCCCCAAACCACATCC +
Preference number: 4 (lower is better)
Translates to: SSFSFFWKRGPNHLHPVNYVIHT*LPQTTS
Trigger: GGATGTGGTTTGGGGCAGGCAGGTATGGATCACATA...GTTTACTGGATGGAGATGATTTGGGCCTCTCTTCCAGAAGAAGCTAAAGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp ACACATGTGCACATCACATGTAGCTATGTCTCGTATGTCTTTCACATGTCACATGCTTCAAGCCGCCAATaGGGATGTCTTCTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: THVHITCSYVSYVFHMSHASSRQ*GCLLQN
Trigger: GTTCTGGAGAAGACATCCTCATTGGCGGCTTGAAGC...ATGTGACATGTGAAAGACATACGAGACATAGCTACATGTGATGTGCACATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp ACACATGTGCACATCACATGTAGCTATGTCTCGTATGTCTTTCACATGTCACATAGTCAGAGTGGACAATaGCTTCAGCCTCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: THVHITCSYVSYVFHMSHSQSGQ*LQPPPG
Trigger: ACCAGGTGGAGGCTGAAGTCATTGTCCACTCTGACT...ATGTGACATGTGAAAGACATACGAGACATAGCTACATGTGATGTGCACATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TTCCCCTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAATTGTTCACTGCAAACTaGTATTCCACATTGTCCATG +
Preference number: 4 (lower is better)
Translates to: FPSMTWIHPWRTLGSQSQLFTAN*YSTLSM
Trigger: CATGGACAATGTGGAATACCAGTTTGCAGTGAACAA...TTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp ACACATGTGCACATCACATGTAGCTATGTCTCGTATGTCTTTCACATGTCACATTCTGACAGCTTCTCCTaGAGCGTGATCACATCCTGC +
Preference number: 4 (lower is better)
Translates to: THVHITCSYVSYVFHMSHSDSFS*SVITSC
Trigger: GCAGGATGTGATCACGCTCCAGGAGAAGCTGTCAGA...ATGTGACATGTGAAAGACATACGAGACATAGCTACATGTGATGTGCACATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TTCCCCTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGTGCTAGTGAGAAATaGCCACTTTCTTATCAACTG +
Preference number: 4 (lower is better)
Translates to: FPSMTWIHPWRTLGSQSQSASEK*PLSYQL
Trigger: CAGTTGATAAGAAAGTGGCCATTTCTCACTAGCACT...TTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp ATACACAGTGGTGTTAGCCACAGCAGCGCTGAATGCTACAGAAATACTACAAGTAAACATTCCCCTCTATaGCTTGGATCCATCCATGGA +
Preference number: 4 (lower is better)
Translates to: IHSGVSHSSAECYRNTTSKHSPL*LGSIHG
Trigger: TCCATGGATGGATCCAAGTCATAGAGGGGAATGTTT...ACTTGTAGTATTTCTGTAGCATTCAGCGCTGCTGTGGCTAACACCACTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp ATACACAGTGGTGTTAGCCACAGCAGCGCTGAATGCTACAGAAATACTACAAGTTGGGTCAGCTCATACTaGTTCACTTTCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: IHSGVSHSSAECYRNTTSWVSSY*FTFFLS
Trigger: GCTCAAGAAGAAAGTGAAGCAGTATGAGCTGACCCA...ACTTGTAGTATTTCTGTAGCATTCAGCGCTGCTGTGGCTAACACCACTGTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATAAACCAGAACCTCAGTaGCTGTTAAACAAGAACATG +
Preference number: 4 (lower is better)
Translates to: CQTGIGDTLRVCNKRLGDKPEPQ*LLNKNM
Trigger: CATGTTCTTGTTTAACAGGCACTGAGGTTCTGGTTT...ATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CCA 90 bp TGGGACTGTCTTTGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAGAACCTGTAGTTCTGTaGTGTCGTTGTTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: WDCLCQTGIGDTLRVCNKEPVVL*CRCSLQ
Trigger: TTGCAGTGAACAACGACACCACAGAACTACAGGTTC...TTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACAAAGACAGTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp ACACATGTGCACATCACATGTAGCTATGTCTCGTATGTCTTTCACATGTCACATCATCCTCATGTTTGTTaGAAGCCACGAGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: THVHITCSYVSYVFHMSHHPHVC*KPRASP
Trigger: AGGTGAAGCTCGTGGCTTTCAACAAACATGAGGATG...ATGTGACATGTGAAAGACATACGAGACATAGCTACATGTGATGTGCACATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp ACACATGTGCACATCACATGTAGCTATGTCTCGTATGTCTTTCACATGTCACATAAGCCGCAACTGTGCTaGGAGACATTCCACCATTTA +
Preference number: 4 (lower is better)
Translates to: THVHITCSYVSYVFHMSHKPQLC*ETFHHL
Trigger: TAAATGGTGGAATGTCTCTCAGCACAGTTGCGGCTT...ATGTGACATGTGAAAGACATACGAGACATAGCTACATGTGATGTGCACATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp TGGGACTGTCTTTGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAGGTGTCGTTGTTCACTaGAAACTGGTATTCCACATT +
Preference number: 4 (lower is better)
Translates to: WDCLCQTGIGDTLRVCNKGVVVH*KLVFHI
Trigger: AATGTGGAATACCAGTTTGCAGTGAACAACGACACC...TTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACAAAGACAGTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR TCA 90 bp ACACATGTGCACATCACATGTAGCTATGTCTCGTATGTCTTTCACATGTCACATGGCAGAGTTAACTCTTaGTGTGCCAATCAGACATCA +
Preference number: 4 (lower is better)
Translates to: THVHITCSYVSYVFHMSHGRVNS*CANQTS
Trigger: TGATGTCTGATTGGCACATCAAGAGTTAACTCTGCC...ATGTGACATGTGAAAGACATACGAGACATAGCTACATGTGATGTGCACATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR GCA 90 bp ACACATGTGCACATCACATGTAGCTATGTCTCGTATGTCTTTCACATGTCACATTGCACTTCACACATGTaGACATCACATGTAGCTATG +
Preference number: 4 (lower is better)
Translates to: THVHITCSYVSYVFHMSHCTSHM*TSHVAM
Trigger: CATAGCTACATGTGATGTGCACATGTGTGAAGTGCA...ATGTGACATGTGAAAGACATACGAGACATAGCTACATGTGATGTGCACATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS GCA 90 bp CCCTGGACCTTGACGCGCCCGTTGGGCCGCAGCGGCGCCCCGTTGTaGAGCCAGCGCAGCGCTGGCCGCGGCTCCCCCGACGCGCGGCAC +
Preference number: 5 (lower is better)
Translates to: PWTLTRPLGRSGAPL*SQRSAGRGSPDARH
Trigger: GTGCCGCGCGTCGGGGGAGCCGCGGCCAGCGCTGCGCTGGCTGCACAACGGGGCGCCGCTGCGGCCCAACGGGCGCGTCAAGGTCCAGGG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS TCA 90 bp AAGCGCGCTGTGCTCGCCCGCGTCCGCGACAGCGCCTCGGGCGCCTaGGTGATGGCGGGAGCCGCTAGGGGCGCGAGGGGCGACGCTGAG +
Preference number: 5 (lower is better)
Translates to: KRAVLARVRDSASGA*VMAGAARGARGDAE
Trigger: CTCAGCGTCGCCCCTCGCGCCCCTAGCGGCTCCCGCCATCACTCAGGCGCCCGAGGCGCTGTCGCGGACGCGGGCGAGCACAGCGCGCTT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559327.1
CDS CCA 90 bp CATCTCGGGCCGCTCCCAGGCCACCAACACAGCGGAGCTGCTCAGTaGCGTAGCAGTGACCCGCGTGGGGGCGCTGGGCAGCCCCTCGCG +
Preference number: 5 (lower is better)
Translates to: HLGPLPGHQHSGAAQ*RSSDPRGGAGQPLA
Trigger: CGCGAGGGGCTGCCCAGCGCCCCCACGCGGGTCACTGCTACGCCACTGAGCAGCTCCGCTGTGTTGGTGGCCTGGGAGCGGCCCGAGATG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CCA 90 bp TCCTGCAGGCCGATCTGTGTGATGACCAGGCTGCCACCGCCGCCCTaGACCTTGACGCGCCCGTTGGGCCGCAGCGGCGCCCCGTTGTGC +
Preference number: 5 (lower is better)
Translates to: SCRPICVMTRLPPPP*TLTRPLGRSGAPLC
Trigger: GCACAACGGGGCGCCGCTGCGGCCCAACGGGCGCGTCAAGGTCCAGGGCGGCGGTGGCAGCCTGGTCATCACACAGATCGGCCTGCAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS GCA 90 bp CCGCCAGCACACGGAGCTCAGCGGCTGCAGTGGCGAAGTCGCGCGTaGGGGGCTTGTTGGCGCGGCAGACATAGACGCCGGAGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: PPAHGAQRLQWRSRA*GACWRGRHRRRSAR
Trigger: CCTGGCACTCCGGCGTCTATGTCTGCCGCGCCAACAAGCCCCGCACGCGCGACTTCGCCACTGCAGCCGCTGAGCTCCGTGTGCTGGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CCA 90 bp GGAGCTCAGCGGCTGCAGTGGCGAAGTCGCGCGTGCGGGGCTTGTTaGCGCGGCAGACATAGACGCCGGAGTGCCAGGGCTGCGCGTTGG +
Preference number: 5 (lower is better)
Translates to: GAQRLQWRSRACGAC*RGRHRRRSARAARW
Trigger: CCAACGCGCAGCCCTGGCACTCCGGCGTCTATGTCTGCCGCGCCAACAAGCCCCGCACGCGCGACTTCGCCACTGCAGCCGCTGAGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS GCA 90 bp CACCTCGCCTGGCTGGAGGTCCGGGTAGGAGCAGGAAGCACTGGCTaGCTCTGGCAAGCAGGTAAGTCTGTCTGGCCCGGGGGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: HLAWLEVRVGAGSTG*LWQAGKSVWPGGCQ
Trigger: CTGGCAGCCCCCGGGCCAGACAGACTTACCTGCTTGCCAGAGGCAGCCAGTGCTTCCTGCTCCTACCCGGACCTCCAGCCAGGCGAGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352385.3
ENST00000558048.5
ENST00000559327.1
CDS GCA 90 bp TTGCCCTTTATGGCGTCGTACACCAGAGCCTGCAGCAACAGCGTCTaGCCAGTTCCAGCAGGGGGCAGCAGGGCCCGGGTCAGAGCCGGC +
Preference number: 5 (lower is better)
Translates to: LPFMASYTRACSNSV*PVPAGGSRARVRAG
Trigger: GCCGGCTCTGACCCGGGCCCTGCTGCCCCCTGCTGGAACTGGGCAGACGCTGTTGCTGCAGGCTCTGGTGTACGACGCCATAAAGGGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352385.3
ENST00000558048.5
ENST00000559327.1
CDS GCA 90 bp CTGACCTTTATGGCGTCGTACACCAGAGCCTGCAGCAACAGCGTCTaGCCAGTTCCAGCAGGGGGCAGCAGGGCCCGGGTCAGAGCCGGC +
Preference number: 5 (lower is better)
Translates to: LTFMASYTRACSNSV*PVPAGGSRARVRAG
Trigger: GCCGGCTCTGACCCGGGCCCTGCTGCCCCCTGCTGGAACTGGGCAGACGCTGTTGCTGCAGGCTCTGGTGTACGACGCCATAAAGGTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561309.1
CDS GCA 90 bp GAGGCCCTAGCGTCCGCAGCCGGCTCCGAAGAGGAGGTAGAGCCATaGTCGCATAGCCACGCGTTGTGCTCTGTCGCCCCCTGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: EALASAAGSEEEVEP*SHSHALCSVAPWCP
Trigger: AGGACACCAGGGGGCGACAGAGCACAACGCGTGGCTATGCGAGCATGGCTCTACCTCCTCTTCGGAGCCGGCTGCGGACGCTAGGGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560319.1
CDS TCA 90 bp CACTCTGGCCAGACACCACTGTGGTGTTCTCTGGGGCTGCCACAATaGCCACGTCCTGCCCCCTGGTGGACGCCAGGGACCCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: HSGQTPLWCSLGLPQ*PRPAPWWTPGTLCG
Trigger: CCCACAGAGGGTCCCTGGCGTCCACCAGGGGGCAGGACGTGGTCATTGTGGCAGCCCCAGAGAACACCACAGTGGTGTCTGGCCAGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS GCA 90 bp GGTCCAGCGGCAGCAGCCCCCAGGCTACAGTTTAGCACTGCAGCCTaGTCTGGGCCCAGGATCACTTGCAGTGGCCCCACTCCACAGCTC +
Preference number: 5 (lower is better)
Translates to: GPAAAAPRLQFSTAA*SGPRITCSGPTPQL
Trigger: GAGCTGTGGAGTGGGGCCACTGCAAGTGATCCTGGGCCCAGAGCAGGCTGCAGTGCTAAACTGTAGCCTGGGGGCTGCTGCCGCTGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS TCA 90 bp GGCGGGAGAAAGGCCCAGGTCCCACCTCTGTGCGCGCCCCCATCTTaGAGAAGTACCGAGTGTCGCTCTCCAGGCCATGGACCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: GGRKAQVPPLCAPPS*RSTECRSPGHGPQH
Trigger: GTGCTGAGGTCCATGGCCTGGAGAGCGACACTCGGTACTTCTTCAAGATGGGGGCGCGCACAGAGGTGGGACCTGGGCCTTTCTCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS GCA 90 bp ATGTCCAGCGAGTCTGACAGCTTCTCCTGGAGCGTGATCACATCCTaGAGGCGGGAGAAAGGCCCAGGTCCCACCTCTGTGCGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: MSSESDSFSWSVITS*RREKGPGPTSVRAP
Trigger: GGGGGCGCGCACAGAGGTGGGACCTGGGCCTTTCTCCCGCCTGCAGGATGTGATCACGCTCCAGGAGAAGCTGTCAGACTCGCTGGACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CCA 90 bp CATCCCAAGCCTGGTCTCCACGGCCCCCTGGCAGGCGATCGCCATTaGCCTCCTCCTCAGCCCCCACCTCCCGCCAATATAGTTTGTAGC +
Preference number: 5 (lower is better)
Translates to: HPKPGLHGPLAGDRH*PPPQPPPPANIVCS
Trigger: GCTACAAACTATATTGGCGGGAGGTGGGGGCTGAGGAGGAGGCCAATGGCGATCGCCTGCCAGGGGGCCGTGGAGACCAGGCTTGGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CCA 90 bp TGCTTCACTTTCTTCTTGAGCCGGACAGGCCCCACATCCCAAGCCTaGTCTCCACGGCCCCCTGGCAGGCGATCGCCATTGGCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: CFTFFLSRTGPTSQA*SPRPPGRRSPLASS
Trigger: GGAGGAGGCCAATGGCGATCGCCTGCCAGGGGGCCGTGGAGACCAGGCTTGGGATGTGGGGCCTGTCCGGCTCAAGAAGAAAGTGAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CCA 90 bp ACTTCAGCCCTGTCCTCCACGTCTGAGGGTGGCGGGGACCAGTCCTaGGGATGGGGGTGCACAAGGGACTCCAATTCATGGGCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: TSALSSTSEGGGDQS*GWGCTRDSNSWAAG
Trigger: CCCAGCTGCCCATGAATTGGAGTCCCTTGTGCACCCCCATCCCCAGGACTGGTCCCCGCCACCCTCAGACGTGGAGGACAGGGCTGAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352385.3
ENST00000559327.1
ENST00000560319.1
ENST00000561309.1
CDS GCA 90 bp TGGGACAGCCACAGGGAACCATTGGGCAGCAGGTGTAAGTGGTCGTaGTCCAGCAGGGTGTCCCCATCCTTGCTCCAGGTCACCCTGGTG +
Preference number: 5 (lower is better)
Translates to: WDSHREPLGSRCKWS*SSRVSPSLLQVTLV
Trigger: CACCAGGGTGACCTGGAGCAAGGATGGGGACACCCTGCTGGAGCACGACCACTTACACCTGCTGCCCAATGGTTCCCTGTGGCTGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS GCA 90 bp GGGCGTCCTGTGATGCATCCACTGGGAGGGGGCCCCGAAGCCGGCTaGTGTACCAGCCGAAATCCGTACTCGATACACCTTGTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: GRPVMHPLGGGPEAG*CTSRNPYSIHLVWL
Trigger: CAGCCAAACAAGGTGTATCGAGTACGGATTTCGGCTGGTACAGCAGCCGGCTTCGGGGCCCCCTCCCAGTGGATGCATCACAGGACGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CCA 90 bp AGTGGCTGGGACAGCCACAGGGAACCATTGGGCAGCAGGTGTAAGTaGTCGTGCTCCAGCAGGGTGTCCCCATCCTTGCTCCAGGTCACC +
Preference number: 5 (lower is better)
Translates to: SGWDSHREPLGSRCK*SCSSRVSPSLLQVT
Trigger: GGTGACCTGGAGCAAGGATGGGGACACCCTGCTGGAGCACGACCACTTACACCTGCTGCCCAATGGTTCCCTGTGGCTGTCCCAGCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CCA 90 bp CGCTTGGTTGAGCCCAGGAGATCTTATCCTGGTCCCAGTCCCACTTaGCCACAGCCAAGCCGACTGGCCTCTTCTCCCCACACGGGGATG +
Preference number: 5 (lower is better)
Translates to: RLVEPRRSYPGPSPT*PQPSRLASSPHTGM
Trigger: CATCCCCGTGTGGGGAGAAGAGGCCAGTCGGCTTGGCTGTGGCCAAGTGGGACTGGGACCAGGATAAGATCTCCTGGGCTCAACCAAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558048.5
CDS TCA 90 bp CATTGTCCATGCCCCGTGCCTTCTGGTAGTGGAGAGAGAAGCCGATaGTCTGCTCGCTGTGCATCTCGGGCCGCTCCCAGGCCACCAACA +
Preference number: 5 (lower is better)
Translates to: HCPCPVPSGSGERSR*SARCASRAAPRPPT
Trigger: TGTTGGTGGCCTGGGAGCGGCCCGAGATGCACAGCGAGCAGATCATCGGCTTCTCTCTCCACTACCAGAAGGCACGGGGCATGGACAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CCA 90 bp CACTGCCATTGGGTGCTAGTGGCTGGGACAGCCACAGGGAACCATTaGGCAGCAGGTGTAAGTGGTCGTGCTCCAGCAGGGTGTCCCCAT +
Preference number: 5 (lower is better)
Translates to: HCHWVLVAGTATGNH*AAGVSGRAPAGCPH
Trigger: ATGGGGACACCCTGCTGGAGCACGACCACTTACACCTGCTGCCCAATGGTTCCCTGTGGCTGTCCCAGCCACTAGCACCCAATGGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CCA 90 bp ACATTCCATCACCACACTCTGGCCAGACACCACTGTGGTGTTCTCTaGGGCTGCCACAATGACCACGTCCTGCCCCCTGGTGGACGCCAG +
Preference number: 5 (lower is better)
Translates to: TFHHHTLARHHCGVL*GCHNDHVLPPGGRQ
Trigger: CTGGCGTCCACCAGGGGGCAGGACGTGGTCATTGTGGCAGCCCCAGAGAACACCACAGTGGTGTCTGGCCAGAGTGTGGTGATGGAATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CCA 90 bp CAGCCCCCACCTCCCGCCAATATAGTTTGTAGCCAGAGATCTGGGTaGGGTGAGGGGGTGGCTGCCATGACACGACCAGGGACTCCATCT +
Preference number: 5 (lower is better)
Translates to: QPPPPANIVCSQRSG*GEGVAAMTRPGTPS
Trigger: AGATGGAGTCCCTGGTCGTGTCATGGCAGCCACCCCCTCACCCCACCCAGATCTCTGGCTACAAACTATATTGGCGGGAGGTGGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CCA 90 bp GATCTTATCCTGGTCCCAGTCCCACTTGGCCACAGCCAAGCCGACTaGCCTCTTCTCCCCACACGGGGATGTCTGGGTCTCAGAGGTCTC +
Preference number: 5 (lower is better)
Translates to: DLILVPVPLGHSQAD*PLLPTRGCLGLRGL
Trigger: GAGACCTCTGAGACCCAGACATCCCCGTGTGGGGAGAAGAGGCCAGTCGGCTTGGCTGTGGCCAAGTGGGACTGGGACCAGGATAAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558048.5
CDS TCA 90 bp AGGGCTGCGCGTTGGCAATTAGTAGGTTGGTGCGGCCCAGGACGATaGCATCTGTGGAGATGGGCTTCCCGTCTTGTCGGACCCAGGACA +
Preference number: 5 (lower is better)
Translates to: RAARWQLVGWCGPGR*HLWRWASRLVGPRT
Trigger: TGTCCTGGGTCCGACAAGACGGGAAGCCCATCTCCACAGATGTCATCGTCCTGGGCCGCACCAACCTACTAATTGCCAACGCGCAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS GCA 90 bp GTGAGAACCAAGCTGACCTATTCCGCCGGGATATGGAGGCCCATGTaGTTCCCTGACAGCCAACCATTCCGTGGAGGAGGGAGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: VRTKLTYSAGIWRPM*FPDSQPFRGGGREA
Trigger: GGCCTCTCTCCCTCCTCCACGGAATGGTTGGCTGTCAGGGAAGCACATGGGCCTCCATATCCCGGCGGAATAGGTCAGCTTGGTTCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558048.5
ENST00000560319.1
CDS CCA 90 bp ACAGCCTCAGGGACTGACTCGTCACTGCCATTGGGTGCTAGTGGCTaGGACAGCCACAGGGAACCATTGGGCAGCAGGTGTAAGTGGTCG +
Preference number: 5 (lower is better)
Translates to: TASGTDSSLPLGASG*DSHREPLGSRCKWS
Trigger: CGACCACTTACACCTGCTGCCCAATGGTTCCCTGTGGCTGTCCCAGCCACTAGCACCCAATGGCAGTGACGAGTCAGTCCCTGAGGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CCA 90 bp TGGAGATGGGCTTCCCGTCTTGTCGGACCCAGGACACAAAAGGGGTaGGGTCAGCTGAGGCCACACATTCCATCACCACACTCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: WRWASRLVGPRTQKG*GQLRPHIPSPHSGQ
Trigger: CTGGCCAGAGTGTGGTGATGGAATGTGTGGCCTCAGCTGACCCCACCCCTTTTGTGTCCTGGGTCCGACAAGACGGGAAGCCCATCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CCA 90 bp CACCGAAGCCAGATGGATGTGGAGCTGTTTGATTCCGCATGGACGTaGGCTGGAGGCAGGGGTGGTCCCCTCTGGATAGGCATGTCTGGT +
Preference number: 5 (lower is better)
Translates to: HRSQMDVELFDSAWT*AGGRGGPLWIGMSG
Trigger: ACCAGACATGCCTATCCAGAGGGGACCACCCCTGCCTCCAGCCCACGTCCATGCGGAATCAAACAGCTCCACATCCATCTGGCTTCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS-3UTR CAA 90 bp GGGAAGCCAGAAGATCTTCTCCACACCCGCACTGGGCGTGGGTGGGCTGCCTGGCTCGATACACCTTGTTaGGCTGAAGCGAGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: GKPEDLLHTRTGRGWAAWLDTPC*AEASSA
Trigger: TGCTGAACTCGCTTCAGCCAAACAAGGTGTATCGAG...CCAGGCAGCCCACCCACGCCCAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp GGGAAGCCAGAAGATCTTCTCCACACCCGCACTGGGCGTGGGTGGGCTGCCTGGCCATCCTCATGTTTGTaGAAAGCCACGAGCTTCACC +
Preference number: 5 (lower is better)
Translates to: GKPEDLLHTRTGRGWAAWPSSCL*KATSFT
Trigger: GGTGAAGCTCGTGGCTTTCAACAAACATGAGGATGG...CCAGGCAGCCCACCCACGCCCAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CCA 90 bp GGAGCCTCTGGAGGCAGGGGGTCCTCAGGCTCCAGGTCTTGGAGATaGAGGTCAGGGTTCCCGTTAGATGCACTAAAGTCAGAGTGGACA +
Preference number: 5 (lower is better)
Translates to: GASGGRGSSGSRSWR*RSGFPLDALKSEWT
Trigger: TGTCCACTCTGACTTTAGTGCATCTAACGGGAACCCTGACCTCCATCTCCAAGACCTGGAGCCTGAGGACCCCCTGCCTCCAGAGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352385.3
ENST00000558048.5
ENST00000559327.1
CDS-3UTR CAA 90 bp TGCCTGGGCCACGGTTTCCCAGCTCAACAACCAGTACGCATACATGCACTTCACCTGATGTCCGAAGGGTaGGGGCTGGACAGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: CLGHGFPAQQPVRIHALHLMSEG*GLDRES
Trigger: GCTCTCCCTGTCCAGCCCCAACCCTTCGGACATCAG...GTGAAGTGCATGTATGCGTACTGGTTGTTGAGCTGGGAAACCGTGGCCCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS TCA 90 bp TCAATGTGGCACTCAAAGCGAGCTGTCCCGTTCTCCTCCACCGTCTaGGACTCCGGGTGCAGAGAGAAGTCTGCGAGTGTGGCAAGCTTG +
Preference number: 5 (lower is better)
Translates to: SMWHSKRAVPFSSTV*DSGCREKSASVASL
Trigger: CAAGCTTGCCACACTCGCAGACTTCTCTCTGCACCCGGAGTCTCAGACGGTGGAGGAGAACGGGACAGCTCGCTTTGAGTGCCACATTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS TCA 90 bp GAGCGCTCCACCACAGAGCCGAAAGGCCCATCCATGTCCACGCCGTaGGACTGCACTGCAAACTCGTATTTGGTGAATGGCTTCAAGCCG +
Preference number: 5 (lower is better)
Translates to: ERSTTEPKGPSMSTP*DCTANSYLVNGFKP
Trigger: CGGCTTGAAGCCATTCACCAAATACGAGTTTGCAGTGCAGTCTCACGGCGTGGACATGGATGGGCCTTTCGGCTCTGTGGTGGAGCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CCA 90 bp CCGTTGGGAAGCACGATGAGCCGAGGCTCCTCAGGCAATGTCACCTaGTCCTTCTCCCAAGTAATGATGGGAGCTGGCAGCCCTTCAATG +
Preference number: 5 (lower is better)
Translates to: PLGSTMSRGSSGNVT*SFSQVMMGAGSPSM
Trigger: CATTGAAGGGCTGCCAGCTCCCATCATTACTTGGGAGAAGGACCAGGTGACATTGCCTGAGGAGCCTCGGCTCATCGTGCTTCCCAACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CCA 90 bp AGATCAGGAGCCTCTGGAGGCAGGGGGTCCTCAGGCTCCAGGTCTTaGAGATGGAGGTCAGGGTTCCCGTTAGATGCACTAAAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: RSGASGGRGSSGSRS*RWRSGFPLDALKSE
Trigger: CTCTGACTTTAGTGCATCTAACGGGAACCCTGACCTCCATCTCCAAGACCTGGAGCCTGAGGACCCCCTGCCTCCAGAGGCTCCTGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352385.3
ENST00000558048.5
ENST00000559327.1
CDS CCA 90 bp GCCCTTTCCTTCGTGAGAACCAAGCTGACCTATTCCGCCGGGATATaGAGGCCCATGTGCTTCCCTGACAGCCAACCATTCCGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: ALSFVRTKLTYSAGI*RPMCFPDSQPFRGG
Trigger: TCCTCCACGGAATGGTTGGCTGTCAGGGAAGCACATGGGCCTCCATATCCCGGCGGAATAGGTCAGCTTGGTTCTCACGAAGGAAAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558048.5
CDS-3UTR CAA 90 bp TGGGACTGTCTTTGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAACGCAGCGGCGCCCCGTaGTGCAGCCAGCGCAGCGCT +
Preference number: 5 (lower is better)
Translates to: WDCLCQTGIGDTLRVCNKRSGAP*CSQRSA
Trigger: AGCGCTGCGCTGGCTGCACAACGGGGCGCCGCTGCG...TTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACAAAGACAGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp GGGAAGCCAGAAGATCTTCTCCACACCCGCACTGGGCGTGGGTGGGCTGCCTGGAGTTCTGTGGTGTCGTaGTTCACTGCAAACTGGTAT +
Preference number: 5 (lower is better)
Translates to: GKPEDLLHTRTGRGWAAWSSVVS*FTANWY
Trigger: ATACCAGTTTGCAGTGAACAACGACACCACAGAACT...CCAGGCAGCCCACCCACGCCCAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS TCA 90 bp CCGTCTTGCCCTTCCACACTGCTGCATAGCCATCCTCATGTTTGTTaGAAGCCACGAGCTTCACCTCGTACAGCCGGCCAGGGACTAGCT +
Preference number: 5 (lower is better)
Translates to: PSCPSTLLHSHPHVC*KPRASPRTAGQGLA
Trigger: AGCTAGTCCCTGGCCGGCTGTACGAGGTGAAGCTCGTGGCTTTCAACAAACATGAGGATGGCTATGCAGCAGTGTGGAAGGGCAAGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS GCA 90 bp CATGTCTGGTGCCGGCGCCTTCTCCGTCTTGCCCTTCCACACTGCTaGATAGCCATCCTCATGTTTGTTGAAAGCCACGAGCTTCACCTC +
Preference number: 5 (lower is better)
Translates to: HVWCRRLLRLALPHC*IAILMFVESHELHL
Trigger: GAGGTGAAGCTCGTGGCTTTCAACAAACATGAGGATGGCTATGCAGCAGTGTGGAAGGGCAAGACGGAGAAGGCGCCGGCACCAGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CCA 90 bp CAGCTTTGTGCCTCTGACACAAAGGGGGCACTCTGGCAGGCTCCCTaGAGGACAGCACAAGCCCAGACTCTAGGACTCAAAGGGAAAGAA +
Preference number: 5 (lower is better)
Translates to: QLCASDTKGALWQAP*RTAQAQTLGLKGKE
Trigger: TTCTTTCCCTTTGAGTCCTAGAGTCTGGGCTTGTGCTGTCCTCCAGGGAGCCTGCCAGAGTGCCCCCTTTGTGTCAGAGGCACAAAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558819.1
CDS-3UTR CAA 90 bp GACATACACGGCCACAGGTATCGCATCCTATGTGATCCATACCTGCCTGCCCCAGATGGGCTTCCCGTCTaGTCGGACCCAGGACACAAA +
Preference number: 5 (lower is better)
Translates to: DIHGHRYRILCDPYLPAPDGLPV*SDPGHK
Trigger: TTTGTGTCCTGGGTCCGACAAGACGGGAAGCCCATC...TGGGGCAGGCAGGTATGGATCACATAGGATGCGATACCTGTGGCCGTGTATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp GAGGGTGAGATTCCTGTCATCCCCAATCCAGATCAAGTCAAGCCTCACAGGGTGGGGACATGGCTCTGGTaGTGCATACTGGGCGTCCTG +
Preference number: 5 (lower is better)
Translates to: EGEIPVIPNPDQVKPHRVGTWLW*CILGVL
Trigger: CAGGACGCCCAGTATGCACAACCAGAGCCATGTCCC...CACCCTGTGAGGCTTGACTTGATCTGGATTGGGGATGACAGGAATCTCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS GCA 90 bp AAGATGTTTCCCTGCGTGGTGAGCAAGGTCCACTGGTGCTCAGGCTaGGTGTGGTTGCTGCTGTACAGGATCAGATACTCCACGATCTCC +
Preference number: 5 (lower is better)
Translates to: KMFPCVVSKVHWCSG*VWLLLYRIRYSTIS
Trigger: GGAGATCGTGGAGTATCTGATCCTGTACAGCAGCAACCACACGCAGCCTGAGCACCAGTGGACCTTGCTCACCACGCAGGGAAACATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS GCA 90 bp TCAGCACTGAAGATGTTTCCCTGCGTGGTGAGCAAGGTCCACTGGTaGTCAGGCTGCGTGTGGTTGCTGCTGTACAGGATCAGATACTCC +
Preference number: 5 (lower is better)
Translates to: SALKMFPCVVSKVHW*SGCVWLLLYRIRYS
Trigger: GGAGTATCTGATCCTGTACAGCAGCAACCACACGCAGCCTGAGCACCAGTGGACCTTGCTCACCACGCAGGGAAACATCTTCAGTGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CCA 90 bp CTCAGGCAATGTCACCTGGTCCTTCTCCCAAGTAATGATGGGAGCTaGCAGCCCTTCAATGTGGCACTCAAAGCGAGCTGTCCCGTTCTC +
Preference number: 5 (lower is better)
Translates to: LRQCHLVLLPSNDGS*QPFNVALKASCPVL
Trigger: GAGAACGGGACAGCTCGCTTTGAGTGCCACATTGAAGGGCTGCCAGCTCCCATCATTACTTGGGAGAAGGACCAGGTGACATTGCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CCA 90 bp TGGAGATGGAGGTCAGGGTTCCCGTTAGATGCACTAAAGTCAGAGTaGACAATGACTTCAGCCTCCACCTGGTTCCTGCAGGCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: WRWRSGFPLDALKSE*TMTSASTWFLQAGG
Trigger: ACCCCCAGCCTGCAGGAACCAGGTGGAGGCTGAAGTCATTGTCCACTCTGACTTTAGTGCATCTAACGGGAACCCTGACCTCCATCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352385.3
ENST00000558048.5
ENST00000559327.1
CDS-3UTR CAA 90 bp GGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCTCAAACGCATTCAGAGCCTGCTaGCACCCAACCCAGCCAGAC +
Preference number: 5 (lower is better)
Translates to: GHLFILSLWITAPFPVSNAFRAC*HPTQPD
Trigger: GTCTGGCTGGGTTGGGTGCAAGCAGGCTCTGAATGC...GTTTGAGACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp ATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGATGTGCAAAGACCTCCTaGCCAGCACCCCAGAGGGTG +
Preference number: 5 (lower is better)
Translates to: MENPWIPIPKARCREARRCAKTS*PAPQRV
Trigger: CACCCTCTGGGGTGCTGGCAAGGAGGTCTTTGCACA...TCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS GCA 90 bp CACAGAGCCGAAAGGCCCATCCATGTCCACGCCGTGAGACTGCACTaGAAACTCGTATTTGGTGAATGGCTTCAAGCCGCCAATGAGGAT +
Preference number: 5 (lower is better)
Translates to: HRAERPIHVHAVRLH*KLVFGEWLQAANED
Trigger: ATCCTCATTGGCGGCTTGAAGCCATTCACCAAATACGAGTTTGCAGTGCAGTCTCACGGCGTGGACATGGATGGGCCTTTCGGCTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS-3UTR CAA 90 bp CTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCAGACTCGTCACTGCCATaGGGTGCTAGTGGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: LYDLDPSMENPWIPIPKADSSLP*GASGWD
Trigger: GTCCCAGCCACTAGCACCCAATGGCAGTGACGAGTC...TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp AATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGATCTTCTCCACACCCGCACTGTTGGCAATTAGTAGGTaGGTGCGGCCCAGGACGATG +
Preference number: 5 (lower is better)
Translates to: NPKGKMQGSQKIFSTPALLAISR*VRPRTM
Trigger: CATCGTCCTGGGCCGCACCAACCTACTAATTGCCAA...CAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp CTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAGGCAGTGCGCGCCCCCATCTaGAAGAAGTACCGAGTGTCG +
Preference number: 5 (lower is better)
Translates to: LYDLDPSMENPWIPIPKAVRAPI*KKYRVS
Trigger: CGACACTCGGTACTTCTTCAAGATGGGGGCGCGCAC...TGCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp CAAACTGAAATGAGCTACCCCTTTTCCTGTGCAAAGACCTCCTTGCCAGCACCCAGAGGGCAGGGGGATTaGAGCTGGCAGCTATCTCCA +
Preference number: 5 (lower is better)
Translates to: QTEMSYPFSCAKTSLPAPRGQGD*SWQLSP
Trigger: TGGAGATAGCTGCCAGCTCAAATCCCCCTGCCCTCT...GGGTGCTGGCAAGGAGGTCTTTGCACAGGAAAAGGGGTAGCTCATTTCAGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS GCA 90 bp CTCAGGCTCCAGGTCTTGGAGATGGAGGTCAGGGTTCCCGTTAGATaGACTAAAGTCAGAGTGGACAATGACTTCAGCCTCCACCTGGTT +
Preference number: 5 (lower is better)
Translates to: LRLQVLEMEVRVPVR*TKVRVDNDFSLHLV
Trigger: AACCAGGTGGAGGCTGAAGTCATTGTCCACTCTGACTTTAGTGCATCTAACGGGAACCCTGACCTCCATCTCCAAGACCTGGAGCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352385.3
ENST00000558048.5
ENST00000559327.1
CDS CCA 90 bp CTCCCAGCTGGGAGTAGGCCACCACGTAGAACTCATAATCTGTGTTaGGTTCCAGGTCCCGAACCTGTAGTTCTGTGGTGTCGTTGTTCA +
Preference number: 5 (lower is better)
Translates to: LPAGSRPPRRTHNLC*VPGPEPVVLWCRCS
Trigger: TGAACAACGACACCACAGAACTACAGGTTCGGGACCTGGAACCCAACACAGATTATGAGTTCTACGTGGTGGCCTACTCCCAGCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CCA 90 bp GCCGGCTGCTGTACCAGCCGAAATCCGTACTCGATACACCTTGTTTaGCTGAAGCGAGTTCAGCATAAGCTGTGTCTCATTTCCTCGCAC +
Preference number: 5 (lower is better)
Translates to: AGCCTSRNPYSIHLV*LKRVQHKLCLISSH
Trigger: GTGCGAGGAAATGAGACACAGCTTATGCTGAACTCGCTTCAGCCAAACAAGGTGTATCGAGTACGGATTTCGGCTGGTACAGCAGCCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS-3UTR CAA 90 bp TGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGCGAGTGTGGCAAGCTaGACGACAGCAGTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: CQTGIGDTLRVCNKRLGDASVAS*TTAVWL
Trigger: CAGCCAGACTGCTGTCGTCAAGCTTGCCACACTCGC...ATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp GAGGGTGAGATTCCTGTCATCCCCAATCCAGATCAAGTCAAGCCTCACAGGGTGAACTGGTATTCCACATaGTCCATGCCCCGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: EGEIPVIPNPDQVKPHRVNWYST*SMPRAF
Trigger: GAAGGCACGGGGCATGGACAATGTGGAATACCAGTT...CACCCTGTGAGGCTTGACTTGATCTGGATTGGGGATGACAGGAATCTCACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp ATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGATGCTTCACTTTCTTCTaGAGCCGGACAGGCCCCACA +
Preference number: 5 (lower is better)
Translates to: MENPWIPIPKARCREARRCFTFF*SRTGPT
Trigger: TGTGGGGCCTGTCCGGCTCAAGAAGAAAGTGAAGCA...TCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp TGTGCAAAGACCTCCTTGCCAGCACCCCAGAGGGTGAGATTCCTGTCATCCCCAACTGCAAACTCGTATTaGGTGAATGGCTTCAAGCCG +
Preference number: 5 (lower is better)
Translates to: CAKTSLPAPQRVRFLSSPTANSY*VNGFKP
Trigger: CGGCTTGAAGCCATTCACCAAATACGAGTTTGCAGT...TGGGGATGACAGGAATCTCACCCTCTGGGGTGCTGGCAAGGAGGTCTTTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp CAAACTGAAATGAGCTACCCCTTTTCCTGTGCAAAGACCTCCTTGCCAGCACCCTCAGGCTGCGTGTGGTaGCTGCTGTACAGGATCAGA +
Preference number: 5 (lower is better)
Translates to: QTEMSYPFSCAKTSLPAPSGCVW*LLYRIR
Trigger: TCTGATCCTGTACAGCAGCAACCACACGCAGCCTGA...GGGTGCTGGCAAGGAGGTCTTTGCACAGGAAAAGGGGTAGCTCATTTCAGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp AATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGATCTTCTCCACACCCGCACTGGACTTCTTCCTCCCATaGCCCTTTATGGCGTCGTAC +
Preference number: 5 (lower is better)
Translates to: NPKGKMQGSQKIFSTPALDFFLP*PFMASY
Trigger: GTACGACGCCATAAAGGGCAATGGGAGGAAGAAGTC...CAGTGCGGGTGTGGAGAAGATCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp TTCCCCTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAACTCAGGCTCCAGGTCTaGGAGATGGAGGTCAGGGTT +
Preference number: 5 (lower is better)
Translates to: FPSMTWIHPWRTLGSQSQLRLQV*EMEVRV
Trigger: AACCCTGACCTCCATCTCCAAGACCTGGAGCCTGAG...TTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS TCA 90 bp TACAGTAAGATGCACACTTCTTCTGGCCTGAAAGTTACTTCATGGTaGTCTGTGCCTCCTGAGAGCCCCCTAAGGGGTAAGGCTGGAGCG +
Preference number: 5 (lower is better)
Translates to: YSKMHTSSGLKVTSW*SVPPESPLRGKAGA
Trigger: CGCTCCAGCCTTACCCCTTAGGGGGCTCTCAGGAGGCACAGATCACCATGAAGTAACTTTCAGGCCAGAAGAAGTGTGCATCTTACTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558819.1
CDS-3UTR CAA 90 bp GTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGGGGCTGGGACTGTCTTaGTCAGACAGGCATTGGAGA +
Preference number: 5 (lower is better)
Translates to: VRQALETLSECVIKGWAMGLGLS*SDRHWR
Trigger: TCTCCAATGCCTGTCTGACAAAGACAGTCCCAGCCC...CATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp GTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATGGGCCACCCTCTCTATTaGGGCAATAAGGAGCTGGGA +
Preference number: 5 (lower is better)
Translates to: VRQALETLSECVIKGWAMGHPLY*GNKELG
Trigger: TCCCAGCTCCTTATTGCCCAAATAGAGAGGGTGGCC...CATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp GGGCATCTTTTTATTCTGAGCCTCTGGATCACAGCCCCCTTCCCTGTCTCAAACATCCATGGAGAACCCTaGGATCCCAATCCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: GHLFILSLWITAPFPVSNIHGEP*DPNPKG
Trigger: GCCTTTGGGATTGGGATCCAAGGGTTCTCCATGGAT...GTTTGAGACAGGGAAGGGGGCTGTGATCCAGAGGCTCAGAATAAAAAGATGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp ATGGAGAACCCTTGGATCCCAATCCCAAAGGCAAGATGCAGGGAAGCCAGAAGAAGATGCTTTCAGGGTTaGAGGAAGCCGCAACTGTGC +
Preference number: 5 (lower is better)
Translates to: MENPWIPIPKARCREARRRCFQG*RKPQLC
Trigger: GCACAGTTGCGGCTTCCTCAAACCCTGAAAGCATCT...TCTTCTGGCTTCCCTGCATCTTGCCTTTGGGATTGGGATCCAAGGGTTCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS TCA 90 bp GCTGCTGTACCAGCCGAAATCCGTACTCGATACACCTTGTTTGGCTaGAGCGAGTTCAGCATAAGCTGTGTCTCATTTCCTCGCACCTCA +
Preference number: 5 (lower is better)
Translates to: AAVPAEIRTRYTLFG*SEFSISCVSFPRTS
Trigger: TGAGGTGCGAGGAAATGAGACACAGCTTATGCTGAACTCGCTTCAGCCAAACAAGGTGTATCGAGTACGGATTTCGGCTGGTACAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS TCA 90 bp CACAGCAGAGCCAATTCAGACCGAGGGAGACACAACAAGAAGTGGTaGTTAGCGGTCAGATACTGCCAGCAGAATGAATTCCAAAGCCCC +
Preference number: 5 (lower is better)
Translates to: HSRANSDRGRHNKKW*LAVRYCQQNEFQSP
Trigger: GGGGCTTTGGAATTCATTCTGCTGGCAGTATCTGACCGCTAATCACCACTTCTTGTTGTGTCTCCCTCGGTCTGAATTGGCTCTGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558819.1
CDS CCA 90 bp CATGTCCACGCCGTGAGACTGCACTGCAAACTCGTATTTGGTGAATaGCTTCAAGCCGCCAATGAGGATGTCTTCTCCAGAACTGGTGTA +
Preference number: 5 (lower is better)
Translates to: HVHAVRLHCKLVFGE*LQAANEDVFSRTGV
Trigger: TACACCAGTTCTGGAGAAGACATCCTCATTGGCGGCTTGAAGCCATTCACCAAATACGAGTTTGCAGTGCAGTCTCACGGCGTGGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS-3UTR CAA 90 bp TGGGACTGTCTTTGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGCCACAGGGAACCATaGGGCAGCAGGTGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: WDCLCQTGIGDTLRVCNKSHREP*GSRCKW
Trigger: CCACTTACACCTGCTGCCCAATGGTTCCCTGTGGCT...TTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACAAAGACAGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp TCTTCCTTTAGCTTCTTCTGGAAGAGAGGCCCAAATCATCTCCATCCAGTAAACTGCCAGGGCTGCGCGTaGGCAATTAGTAGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: SSFSFFWKRGPNHLHPVNCQGCA*AISRLV
Trigger: CACCAACCTACTAATTGCCAACGCGCAGCCCTGGCA...GTTTACTGGATGGAGATGATTTGGGCCTCTCTTCCAGAAGAAGCTAAAGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp GAGGGTGAGATTCCTGTCATCCCCAATCCAGATCAAGTCAAGCCTCACAGGGTGAAACCGTATTCTATCTaGTACTTCACCACCTGCCCA +
Preference number: 5 (lower is better)
Translates to: EGEIPVIPNPDQVKPHRVKPYSI*YFTTCP
Trigger: TGGGCAGGTGGTGAAGTACAAGATAGAATACGGTTT...CACCCTGTGAGGCTTGACTTGATCTGGATTGGGGATGACAGGAATCTCACCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp TGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAAGGCTGGGCGATAAATTAAATGCAGAGTaGCTCGGAGGGGAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: CQTGIGDTLRVCNKRLGDKLNAE*LGGEPG
Trigger: CCCTGGCTCCCCTCCGAGCAACTCTGCATTTAATTT...ATCGCCCAGCCTTTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp TGGGACTGTCTTTGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAATGGATGTGGAGCTGTTaGATTCCGCATGGACGTGGG +
Preference number: 5 (lower is better)
Translates to: WDCLCQTGIGDTLRVCNKWMWSC*IPHGRG
Trigger: CCCACGTCCATGCGGAATCAAACAGCTCCACATCCA...TTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACAAAGACAGTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CCA 90 bp ACTCATAATCTGTGTTGGGTTCCAGGTCCCGAACCTGTAGTTCTGTaGTGTCGTTGTTCACTGCAAACTGGTATTCCACATTGTCCATGC +
Preference number: 5 (lower is better)
Translates to: THNLCWVPGPEPVVL*CRCSLQTGIPHCPC
Trigger: GCATGGACAATGTGGAATACCAGTTTGCAGTGAACAACGACACCACAGAACTACAGGTTCGGGACCTGGAACCCAACACAGATTATGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS-3UTR CAA 90 bp TGGGACTGTCTTTGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAGAAGCTCCAAAGGGCTaGATGATGTATCTACAGGCA +
Preference number: 5 (lower is better)
Translates to: WDCLCQTGIGDTLRVCNKEAPKG*MMYLQA
Trigger: TGCCTGTAGATACATCATCAAGCCCTTTGGAGCTTC...TTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACAAAGACAGTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp TCTTCCTTTAGCTTCTTCTGGAAGAGAGGCCCAAATCATCTCCATCCAGTAAACTTTGTCAGACAGGCATaGGAGACACTCTCAGAGTGT +
Preference number: 5 (lower is better)
Translates to: SSFSFFWKRGPNHLHPVNFVRQA*ETLSEC
Trigger: ACACTCTGAGAGTGTCTCCAATGCCTGTCTGACAAA...GTTTACTGGATGGAGATGATTTGGGCCTCTCTTCCAGAAGAAGCTAAAGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp TGGGACTGTCTTTGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAACATGAGGTAGTCACGTaGTTAGAGAAGGATGCAGAG +
Preference number: 5 (lower is better)
Translates to: WDCLCQTGIGDTLRVCNKHEVVT*LEKDAE
Trigger: CTCTGCATCCTTCTCTAACAACGTGACTACCTCATG...TTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACAAAGACAGTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp TGGGACTGTCTTTGTCAGACAGGCATTGGAGACACTCTCAGAGTGTGTAATAAAATTCCCCTCTATGACTaGGATCCATCCATGGAGAAC +
Preference number: 5 (lower is better)
Translates to: WDCLCQTGIGDTLRVCNKIPLYD*DPSMEN
Trigger: GTTCTCCATGGATGGATCCAAGTCATAGAGGGGAAT...TTTATTACACACTCTGAGAGTGTCTCCAATGCCTGTCTGACAAAGACAGTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp TTCCCCTCTATGACTTGGATCCATCCATGGAGAACCCTTGGATCCCAATCCCAAAATAAAATGAGGCTTTaGACCTTCAGAGCAATGATG +
Preference number: 5 (lower is better)
Translates to: FPSMTWIHPWRTLGSQSQNKMRL*TFRAMM
Trigger: CATCATTGCTCTGAAGGTCAAAAGCCTCATTTTATT...TTGGGATTGGGATCCAAGGGTTCTCCATGGATGGATCCAAGTCATAGAGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS-3UTR CAA 90 bp ACACATGTGCACATCACATGTAGCTATGTCTCGTATGTCTTTCACATGTCACATCTGGTTATTTCGAATTaGGCCCAGAAGGCAGAGTTA +
Preference number: 5 (lower is better)
Translates to: THVHITCSYVSYVFHMSHLVISN*AQKAEL
Trigger: TAACTCTGCCTTCTGGGCCAAATTCGAAATAACCAG...ATGTGACATGTGAAAGACATACGAGACATAGCTACATGTGATGTGCACATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS TCA 72 bp TCGCCCGCGTCCGCGACAGCGCCTCGGGCGCCTGAGTaGTGGCGGGAGCCGCTAGGGGCGCGAGGGGCGACG +
Preference number: 6 (lower is better)
Translates to: SPASATAPRAPE*WREPLGARGAT
Trigger: CGTCGCCCCTCGCGCCCCTAGCGGCTCCCGCCATCACTCAGGCGCCCGAGGCGCTGTCGCGGACGCGGGCGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559327.1
CDS TCA 72 bp GTGCTCGCCCGCGTCCGCGACAGCGCCTCGGGCGCCTaGGTGATGGCGGGAGCCGCTAGGGGCGCGAGGGGC +
Preference number: 6 (lower is better)
Translates to: VLARVRDSASGA*VMAGAARGARG
Trigger: GCCCCTCGCGCCCCTAGCGGCTCCCGCCATCACTCAGGCGCCCGAGGCGCTGTCGCGGACGCGGGCGAGCAC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559327.1
CDS GCA 72 bp TTGACGCGCCCGTTGGGCCGCAGCGGCGCCCCGTTGTaGAGCCAGCGCAGCGCTGGCCGCGGCTCCCCCGAC +
Preference number: 6 (lower is better)
Translates to: LTRPLGRSGAPL*SQRSAGRGSPD
Trigger: GTCGGGGGAGCCGCGGCCAGCGCTGCGCTGGCTGCACAACGGGGCGCCGCTGCGGCCCAACGGGCGCGTCAA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CAA 72 bp AGGCTGCCACCGCCGCCCTGGACCTTGACGCGCCCGTaGGGCCGCAGCGGCGCCCCGTTGTGCAGCCAGCGC +
Preference number: 6 (lower is better)
Translates to: RLPPPPWTLTRP*GRSGAPLCSQR
Trigger: GCGCTGGCTGCACAACGGGGCGCCGCTGCGGCCCAACGGGCGCGTCAAGGTCCAGGGCGGCGGTGGCAGCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS TCA 72 bp TCGCCCGCGTCCGCGACAGCGCCTCGGGCGCCTGAGTaGTGGCGGGAGCCGCCAGCACACGGAGCTCAGCGG +
Preference number: 6 (lower is better)
Translates to: SPASATAPRAPE*WREPPAHGAQR
Trigger: CCGCTGAGCTCCGTGTGCTGGCGGCTCCCGCCATCACTCAGGCGCCCGAGGCGCTGTCGCGGACGCGGGCGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CCA 72 bp CCGATCTGTGTGATGACCAGGCTGCCACCGCCGCCCTaGACCTTGACGCGCCCGTTGGGCCGCAGCGGCGCC +
Preference number: 6 (lower is better)
Translates to: PICVMTRLPPPP*TLTRPLGRSGA
Trigger: GGCGCCGCTGCGGCCCAACGGGCGCGTCAAGGTCCAGGGCGGCGGTGGCAGCCTGGTCATCACACAGATCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS GCA 72 bp GATGGCGGGAGCCGCCAGCACACGGAGCTCAGCGGCTaGAGTGGCGAAGTCGCGCGTGCGGGGCTTGTTGGC +
Preference number: 6 (lower is better)
Translates to: DGGSRQHTELSG*SGEVARAGLVG
Trigger: GCCAACAAGCCCCGCACGCGCGACTTCGCCACTGCAGCCGCTGAGCTCCGTGTGCTGGCGGCTCCCGCCATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CCA 72 bp CCGCTCCCAGGCCACCAACACAGCGGAGCTGCTCAGTaGCGTAGCAGTGACCCGCGTGGGGGCGCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: PLPGHQHSGAAQ*RSSDPRGGAGQ
Trigger: CTGCCCAGCGCCCCCACGCGGGTCACTGCTACGCCACTGAGCAGCTCCGCTGTGTTGGTGGCCTGGGAGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS GCA 72 bp CACGGAGCTCAGCGGCTGCAGTGGCGAAGTCGCGCGTaGGGGGCTTGTTGGCGCGGCAGACATAGACGCCGG +
Preference number: 6 (lower is better)
Translates to: HGAQRLQWRSRA*GACWRGRHRRR
Trigger: CCGGCGTCTATGTCTGCCGCGCCAACAAGCCCCGCACGCGCGACTTCGCCACTGCAGCCGCTGAGCTCCGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CCA 72 bp GGCCCCACTCCACAGCTCAGCTCCACAGTCGTCTCCTaGGGCAACAGCAGCTCCCCGCGCGCGGCCAACAGG +
Preference number: 6 (lower is better)
Translates to: GPTPQLSSTVVS*GNSSSPRAANR
Trigger: CCTGTTGGCCGCGCGCGGGGAGCTGCTGTTGCCCCAGGAGACGACTGTGGAGCTGAGCTGTGGAGTGGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CCA 72 bp CGGCTGCAGTGGCGAAGTCGCGCGTGCGGGGCTTGTTaGCGCGGCAGACATAGACGCCGGAGTGCCAGGGCT +
Preference number: 6 (lower is better)
Translates to: RLQWRSRACGAC*RGRHRRRSARA
Trigger: AGCCCTGGCACTCCGGCGTCTATGTCTGCCGCGCCAACAAGCCCCGCACGCGCGACTTCGCCACTGCAGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CCA 72 bp GGTCGGATGGGGGTGTGGAGGGCCGGTCAGGCAGGGTaGAGCGCTCCACCACAGAGCCGAAAGGCCCATCCA +
Preference number: 6 (lower is better)
Translates to: GRMGVWRAGQAG*SAPPQSRKAHP
Trigger: TGGATGGGCCTTTCGGCTCTGTGGTGGAGCGCTCCACCCTGCCTGACCGGCCCTCCACACCCCCATCCGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS GCA 72 bp ATGGCGTCGTACACCAGAGCCTGCAGCAACAGCGTCTaGCCAGTTCCAGCAGGGGGCAGCAGGGCCCGGGTC +
Preference number: 6 (lower is better)
Translates to: MASYTRACSNSV*PVPAGGSRARV
Trigger: GACCCGGGCCCTGCTGCCCCCTGCTGGAACTGGGCAGACGCTGTTGCTGCAGGCTCTGGTGTACGACGCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352385.3
ENST00000558048.5
ENST00000559327.1
ENST00000561309.1
CDS GCA 72 bp GCGTCCGCAGCCGGCTCCGAAGAGGAGGTAGAGCCATaGTCGCATAGCCACGCGTTGTGCTCTGTCGCCCCC +
Preference number: 6 (lower is better)
Translates to: ASAAGSEEEVEP*SHSHALCSVAP
Trigger: GGGGGCGACAGAGCACAACGCGTGGCTATGCGAGCATGGCTCTACCTCCTCTTCGGAGCCGGCTGCGGACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560319.1
CDS CCA 72 bp GCATGGACGTGGGCTGGAGGCAGGGGTGGTCCCCTCTaGATAGGCATGTCTGGTGCCGGCGCCTTCTCCGTC +
Preference number: 6 (lower is better)
Translates to: AWTWAGGRGGPL*IGMSGAGAFSV
Trigger: GACGGAGAAGGCGCCGGCACCAGACATGCCTATCCAGAGGGGACCACCCCTGCCTCCAGCCCACGTCCATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS TCA 72 bp GGGACATGGCTCTGGTTGTGCATACTGGGCGTCCTGTaGTGCATCCACTGGGAGGGGGCCCCGAAGCCGGCT +
Preference number: 6 (lower is better)
Translates to: GTWLWLCILGVL*CIHWEGAPKPA
Trigger: AGCCGGCTTCGGGGCCCCCTCCCAGTGGATGCATCACAGGACGCCCAGTATGCACAACCAGAGCCATGTCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS GCA 72 bp TGCTGCACTGGGGACATCATCCAGTGTGTGCACCAGTaGTGGGGTGGAGGTGCGGCTGGCTCCCAGCTGGGA +
Preference number: 6 (lower is better)
Translates to: CCTGDIIQCVHQ*WGGGAAGSQLG
Trigger: TCCCAGCTGGGAGCCAGCCGCACCTCCACCCCAGCACTGGTGCACACACTGGATGATGTCCCCAGTGCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS GCA 72 bp TGGCTGGAGGTCCGGGTAGGAGCAGGAAGCACTGGCTaGCTCTGGCAAGCAGGTAAGTCTGTCTGGCCCGGG +
Preference number: 6 (lower is better)
Translates to: WLEVRVGAGSTG*LWQAGKSVWPG
Trigger: CCCGGGCCAGACAGACTTACCTGCTTGCCAGAGGCAGCCAGTGCTTCCTGCTCCTACCCGGACCTCCAGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352385.3
ENST00000558048.5
ENST00000559327.1
CDS CCA 72 bp AAGTCTGCGAGTGTGGCAAGCTTGACGACAGCAGTCTaGCTGGCCAGCACTCCGAGGGGGCCGTGGGCTAGG +
Preference number: 6 (lower is better)
Translates to: KSASVASLTTAV*LASTPRGPWAR
Trigger: CCTAGCCCACGGCCCCCTCGGAGTGCTGGCCAGCCAGACTGCTGTCGTCAAGCTTGCCACACTCGCAGACTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CCA 72 bp TTCTTCTTGAGCCGGACAGGCCCCACATCCCAAGCCTaGTCTCCACGGCCCCCTGGCAGGCGATCGCCATTG +
Preference number: 6 (lower is better)
Translates to: FFLSRTGPTSQA*SPRPPGRRSPL
Trigger: CAATGGCGATCGCCTGCCAGGGGGCCGTGGAGACCAGGCTTGGGATGTGGGGCCTGTCCGGCTCAAGAAGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CCA 72 bp ACCAGGAAGAGACTGGCAAGCTTGACGACAGCAGTCTaGCTGGCCAGCACTCCGAGGGGGCCGTGGGCTAGG +
Preference number: 6 (lower is better)
Translates to: TRKRLASLTTAV*LASTPRGPWAR
Trigger: CCTAGCCCACGGCCCCCTCGGAGTGCTGGCCAGCCAGACTGCTGTCGTCAAGCTTGCCAGTCTCTTCCTGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558819.1
CDS CCA 72 bp CTGGTCCCAGTCCCACTTGGCCACAGCCAAGCCGACTaGCCTCTTCTCCCCACACGGGGATGTCTGGGTCTC +
Preference number: 6 (lower is better)
Translates to: LVPVPLGHSQAD*PLLPTRGCLGL
Trigger: GAGACCCAGACATCCCCGTGTGGGGAGAAGAGGCCAGTCGGCTTGGCTGTGGCCAAGTGGGACTGGGACCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558048.5
CDS TCA 72 bp TGCCCCGTGCCTTCTGGTAGTGGAGAGAGAAGCCGATaGTCTGCTCGCTGTGCATCTCGGGCCGCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: CPVPSGSGERSR*SARCASRAAPR
Trigger: CCTGGGAGCGGCCCGAGATGCACAGCGAGCAGATCATCGGCTTCTCTCTCCACTACCAGAAGGCACGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS GCA 72 bp GGCTGGAGCGTGGGGTTTGGCTCCACATGTTCCACCTaGCGTGCAGGCAGGAGCTCCCTTAGGAGGCAGCTT +
Preference number: 6 (lower is better)
Translates to: GWSVGFGSTCST*RAGRSSLRRQL
Trigger: AAGCTGCCTCCTAAGGGAGCTCCTGCCTGCACGGCAGGTGGAACATGTGGAGCCAAACCCCACGCTCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558819.1
CDS CCA 72 bp CTGTCCTCCACGTCTGAGGGTGGCGGGGACCAGTCCTaGGGATGGGGGTGCACAAGGGACTCCAATTCATGG +
Preference number: 6 (lower is better)
Translates to: LSSTSEGGGDQS*GWGCTRDSNSW
Trigger: CCATGAATTGGAGTCCCTTGTGCACCCCCATCCCCAGGACTGGTCCCCGCCACCCTCAGACGTGGAGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352385.3
ENST00000559327.1
ENST00000560319.1
ENST00000561309.1
CDS CCA 72 bp CCTCCTGAGAGCCCCCTAAGGGGTAAGGCTGGAGCGTaGGGTTTGGCTCCACATGTTCCACCTGCCGTGCAG +
Preference number: 6 (lower is better)
Translates to: PPESPLRGKAGA*GLAPHVPPAVQ
Trigger: CTGCACGGCAGGTGGAACATGTGGAGCCAAACCCCACGCTCCAGCCTTACCCCTTAGGGGGCTCTCAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558819.1
CDS CAA 90 bp AGGCGGGAGAAAGGCCCAGGTCCCACCTCTGTGCGCGCCCCCATCTaGAAGAAGTACCGAGTGTCGCTCTCCAGGCCATGGACCTCAGCA +
Preference number: 6 (lower is better)
Translates to: RREKGPGPTSVRAPI*KKYRVSLSRPWTSA
Trigger: TGCTGAGGTCCATGGCCTGGAGAGCGACACTCGGTACTTCTTCAAGATGGGGGCGCGCACAGAGGTGGGACCTGGGCCTTTCTCCCGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS GCA 72 bp CTCCGGCCTTCAGAAACACCGCCACCCATAAGGCTGTaGACTTCAGCCCTGTCCTCCACGTCTGAGGGTGGC +
Preference number: 6 (lower is better)
Translates to: LRPSETPPPIRL*TSALSSTSEGG
Trigger: GCCACCCTCAGACGTGGAGGACAGGGCTGAAGTGCACAGCCTTATGGGTGGCGGTGTTTCTGAAGGCCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352385.3
ENST00000559327.1
ENST00000560319.1
ENST00000561309.1
CDS GCA 72 bp CTCCCATTGCCCTTTATGGCGTCGTACACCAGAGCCTaGAGCAACAGCGTCTGCCCAGTTCCAGCAGGGGGC +
Preference number: 6 (lower is better)
Translates to: LPLPFMASYTRA*SNSVCPVPAGG
Trigger: GCCCCCTGCTGGAACTGGGCAGACGCTGTTGCTGCAGGCTCTGGTGTACGACGCCATAAAGGGCAATGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352385.3
ENST00000558048.5
ENST00000559327.1
CDS GCA 72 bp AGGACGCTGACCTTTATGGCGTCGTACACCAGAGCCTaGAGCAACAGCGTCTGCCCAGTTCCAGCAGGGGGC +
Preference number: 6 (lower is better)
Translates to: RTLTFMASYTRA*SNSVCPVPAGG
Trigger: GCCCCCTGCTGGAACTGGGCAGACGCTGTTGCTGCAGGCTCTGGTGTACGACGCCATAAAGGTCAGCGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561309.1
CDS CCA 72 bp CACCACACTCTGGCCAGACACCACTGTGGTGTTCTCTaGGGCTGCCACAATGACCACGTCCTGCCCCCTGGT +
Preference number: 6 (lower is better)
Translates to: HHTLARHHCGVL*GCHNDHVLPPG
Trigger: ACCAGGGGGCAGGACGTGGTCATTGTGGCAGCCCCAGAGAACACCACAGTGGTGTCTGGCCAGAGTGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CCA 72 bp TGGATCCCCAACACCCGAGATGAGATCAGGAGCCTCTaGAGGCAGGGGGTCCTCAGGCTCCAGGTCTTGGAG +
Preference number: 6 (lower is better)
Translates to: WIPNTRDEIRSL*RQGVLRLQVLE
Trigger: CTCCAAGACCTGGAGCCTGAGGACCCCCTGCCTCCAGAGGCTCCTGATCTCATCTCGGGTGTTGGGGATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352385.3
ENST00000558048.5
ENST00000559327.1
CDS CCA 72 bp GAGCCCAGGAGATCTTATCCTGGTCCCAGTCCCACTTaGCCACAGCCAAGCCGACTGGCCTCTTCTCCCCAC +
Preference number: 6 (lower is better)
Translates to: EPRRSYPGPSPT*PQPSRLASSPH
Trigger: GTGGGGAGAAGAGGCCAGTCGGCTTGGCTGTGGCCAAGTGGGACTGGGACCAGGATAAGATCTCCTGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558048.5
CDS CAA 90 bp TCACTGCCATTGGGTGCTAGTGGCTGGGACAGCCACAGGGAACCATaGGGCAGCAGGTGTAAGTGGTCGTGCTCCAGCAGGGTGTCCCCA +
Preference number: 6 (lower is better)
Translates to: SLPLGASGWDSHREP*GSRCKWSCSSRVSP
Trigger: TGGGGACACCCTGCTGGAGCACGACCACTTACACCTGCTGCCCAATGGTTCCCTGTGGCTGTCCCAGCCACTAGCACCCAATGGCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS GCA 72 bp CACAGGGAACCATTGGGCAGCAGGTGTAAGTGGTCGTaGTCCAGCAGGGTGTCCCCATCCTTGCTCCAGGTC +
Preference number: 6 (lower is better)
Translates to: HREPLGSRCKWS*SSRVSPSLLQV
Trigger: GACCTGGAGCAAGGATGGGGACACCCTGCTGGAGCACGACCACTTACACCTGCTGCCCAATGGTTCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS GCA 72 bp GTGATGCATCCACTGGGAGGGGGCCCCGAAGCCGGCTaGTGTACCAGCCGAAATCCGTACTCGATACACCTT +
Preference number: 6 (lower is better)
Translates to: VMHPLGGGPEAG*CTSRNPYSIHL
Trigger: AAGGTGTATCGAGTACGGATTTCGGCTGGTACAGCAGCCGGCTTCGGGGCCCCCTCCCAGTGGATGCATCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS GCA 72 bp GAGTCTGACAGCTTCTCCTGGAGCGTGATCACATCCTaGAGGCGGGAGAAAGGCCCAGGTCCCACCTCTGTG +
Preference number: 6 (lower is better)
Translates to: ESDSFSWSVITS*RREKGPGPTSV
Trigger: CACAGAGGTGGGACCTGGGCCTTTCTCCCGCCTGCAGGATGTGATCACGCTCCAGGAGAAGCTGTCAGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS GCA 72 bp CCCAGGCAGACACCCACGATGATGCCCGTGACTGAGTaGATGTCCAGCGAGTCTGACAGCTTCTCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: PRQTPTMMPVTE*MSSESDSFSWS
Trigger: GCTCCAGGAGAAGCTGTCAGACTCGCTGGACATGCACTCAGTCACGGGCATCATCGTGGGTGTCTGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CCA 72 bp GACAGCCACAGGGAACCATTGGGCAGCAGGTGTAAGTaGTCGTGCTCCAGCAGGGTGTCCCCATCCTTGCTC +
Preference number: 6 (lower is better)
Translates to: DSHREPLGSRCK*SCSSRVSPSLL
Trigger: GAGCAAGGATGGGGACACCCTGCTGGAGCACGACCACTTACACCTGCTGCCCAATGGTTCCCTGTGGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CCA 72 bp CCTCCCGCCAATATAGTTTGTAGCCAGAGATCTGGGTaGGGTGAGGGGGTGGCTGCCATGACACGACCAGGG +
Preference number: 6 (lower is better)
Translates to: PPANIVCSQRSG*GEGVAAMTRPG
Trigger: CCCTGGTCGTGTCATGGCAGCCACCCCCTCACCCCACCCAGATCTCTGGCTACAAACTATATTGGCGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CCA 72 bp CAGATGGATGTGGAGCTGTTTGATTCCGCATGGACGTaGGCTGGAGGCAGGGGTGGTCCCCTCTGGATAGGC +
Preference number: 6 (lower is better)
Translates to: QMDVELFDSAWT*AGGRGGPLWIG
Trigger: GCCTATCCAGAGGGGACCACCCCTGCCTCCAGCCCACGTCCATGCGGAATCAAACAGCTCCACATCCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CAA 72 bp CCGGAGTGCCAGGGCTGCGCGTTGGCAATTAGTAGGTaGGTGCGGCCCAGGACGATGACATCTGTGGAGATG +
Preference number: 6 (lower is better)
Translates to: PECQGCALAISR*VRPRTMTSVEM
Trigger: CATCTCCACAGATGTCATCGTCCTGGGCCGCACCAACCTACTAATTGCCAACGCGCAGCCCTGGCACTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS TCA 72 bp CACTCAAAGCGAGCTGTCCCGTTCTCCTCCACCGTCTaGGACTCCGGGTGCAGAGAGAAGTCTGCGAGTGTG +
Preference number: 6 (lower is better)
Translates to: HSKRAVPFSSTV*DSGCREKSASV
Trigger: CACACTCGCAGACTTCTCTCTGCACCCGGAGTCTCAGACGGTGGAGGAGAACGGGACAGCTCGCTTTGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS GCA 72 bp AAGCTGACCTATTCCGCCGGGATATGGAGGCCCATGTaGTTCCCTGACAGCCAACCATTCCGTGGAGGAGGG +
Preference number: 6 (lower is better)
Translates to: KLTYSAGIWRPM*FPDSQPFRGGG
Trigger: CCCTCCTCCACGGAATGGTTGGCTGTCAGGGAAGCACATGGGCCTCCATATCCCGGCGGAATAGGTCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558048.5
ENST00000560319.1
CDS CCA 72 bp GCTTCCCGTCTTGTCGGACCCAGGACACAAAAGGGGTaGGGTCAGCTGAGGCCACACATTCCATCACCACAC +
Preference number: 6 (lower is better)
Translates to: ASRLVGPRTQKG*GQLRPHIPSPH
Trigger: GTGTGGTGATGGAATGTGTGGCCTCAGCTGACCCCACCCCTTTTGTGTCCTGGGTCCGACAAGACGGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CCA 72 bp GCCTCTGACACAAAGGGGGCACTCTGGCAGGCTCCCTaGAGGACAGCACAAGCCCAGACTCTAGGACTCAAA +
Preference number: 6 (lower is better)
Translates to: ASDTKGALWQAP*RTAQAQTLGLK
Trigger: TTTGAGTCCTAGAGTCTGGGCTTGTGCTGTCCTCCAGGGAGCCTGCCAGAGTGCCCCCTTTGTGTCAGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558819.1
CDS CAA 90 bp GAGATCAGGAGCCTCTGGAGGCAGGGGGTCCTCAGGCTCCAGGTCTaGGAGATGGAGGTCAGGGTTCCCGTTAGATGCACTAAAGTCAGA +
Preference number: 6 (lower is better)
Translates to: EIRSLWRQGVLRLQV*EMEVRVPVRCTKVR
Trigger: TCTGACTTTAGTGCATCTAACGGGAACCCTGACCTCCATCTCCAAGACCTGGAGCCTGAGGACCCCCTGCCTCCAGAGGCTCCTGATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352385.3
ENST00000558048.5
ENST00000559327.1
CDS TCA 72 bp CTTTTTCCACCGAAGCCAGATGGATGTGGAGCTGTTTaGTTCCGCATGGACGTGGGCTGGAGGCAGGGGTGG +
Preference number: 6 (lower is better)
Translates to: LFPPKPDGCGAV*FRMDVGWRQGW
Trigger: CCACCCCTGCCTCCAGCCCACGTCCATGCGGAATCAAACAGCTCCACATCCATCTGGCTTCGGTGGAAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS GCA 72 bp GGCTGCCATGACACGACCAGGGACTCCATCTTTGCCTaGACCTTCAACTCTGCAGGGGCAAAAGGGACATGG +
Preference number: 6 (lower is better)
Translates to: GCHDTTRDSIFA*TFNSAGAKGTW
Trigger: CCATGTCCCTTTTGCCCCTGCAGAGTTGAAGGTGCAGGCAAAGATGGAGTCCCTGGTCGTGTCATGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CCA 72 bp AGCACGATGAGCCGAGGCTCCTCAGGCAATGTCACCTaGTCCTTCTCCCAAGTAATGATGGGAGCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: STMSRGSSGNVT*SFSQVMMGAGS
Trigger: GCTGCCAGCTCCCATCATTACTTGGGAGAAGGACCAGGTGACATTGCCTGAGGAGCCTCGGCTCATCGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CAA 72 bp GCTTTTTCCACCGAAGCCAGATGGATGTGGAGCTGTTaGATTCCGCATGGACGTGGGCTGGAGGCAGGGGTG +
Preference number: 6 (lower is better)
Translates to: AFSTEARWMWSC*IPHGRGLEAGV
Trigger: CACCCCTGCCTCCAGCCCACGTCCATGCGGAATCAAACAGCTCCACATCCATCTGGCTTCGGTGGAAAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS TCA 72 bp CGTTGGCAATTAGTAGGTTGGTGCGGCCCAGGACGATaGCATCTGTGGAGATGGGCTTCCCGTCTTGTCGGA +
Preference number: 6 (lower is better)
Translates to: RWQLVGWCGPGR*HLWRWASRLVG
Trigger: TCCGACAAGACGGGAAGCCCATCTCCACAGATGTCATCGTCCTGGGCCGCACCAACCTACTAATTGCCAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS TCA 72 bp CTAGCTGGGTCAGCTCATACTGCTTCACTTTCTTCTTaGGCCGGACAGGCCCCACATCCCAAGCCTGGTCTC +
Preference number: 6 (lower is better)
Translates to: LAGSAHTASLSS*AGQAPHPKPGL
Trigger: GAGACCAGGCTTGGGATGTGGGGCCTGTCCGGCTCAAGAAGAAAGTGAAGCAGTATGAGCTGACCCAGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS GCA 72 bp TGCCGGCGCCTTCTCCGTCTTGCCCTTCCACACTGCTaGATAGCCATCCTCATGTTTGTTGAAAGCCACGAG +
Preference number: 6 (lower is better)
Translates to: CRRLLRLALPHC*IAILMFVESHE
Trigger: CTCGTGGCTTTCAACAAACATGAGGATGGCTATGCAGCAGTGTGGAAGGGCAAGACGGAGAAGGCGCCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS GCA 72 bp AAGATGTTTCCCTGCGTGGTGAGCAAGGTCCACTGGTaGTCAGGCTGCGTGTGGTTGCTGCTGTACAGGATC +
Preference number: 6 (lower is better)
Translates to: KMFPCVVSKVHW*SGCVWLLLYRI
Trigger: GATCCTGTACAGCAGCAACCACACGCAGCCTGAGCACCAGTGGACCTTGCTCACCACGCAGGGAAACATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS TCA 72 bp ACCACAGAGCCGAAAGGCCCATCCATGTCCACGCCGTaGGACTGCACTGCAAACTCGTATTTGGTGAATGGC +
Preference number: 6 (lower is better)
Translates to: TTEPKGPSMSTP*DCTANSYLVNG
Trigger: GCCATTCACCAAATACGAGTTTGCAGTGCAGTCTCACGGCGTGGACATGGATGGGCCTTTCGGCTCTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CCA 72 bp TTCGTGAGAACCAAGCTGACCTATTCCGCCGGGATATaGAGGCCCATGTGCTTCCCTGACAGCCAACCATTC +
Preference number: 6 (lower is better)
Translates to: FVRTKLTYSAGI*RPMCFPDSQPF
Trigger: GAATGGTTGGCTGTCAGGGAAGCACATGGGCCTCCATATCCCGGCGGAATAGGTCAGCTTGGTTCTCACGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558048.5
ENST00000560319.1
CDS CAA 72 bp ACTAGCTGGGTCAGCTCATACTGCTTCACTTTCTTCTaGAGCCGGACAGGCCCCACATCCCAAGCCTGGTCT +
Preference number: 6 (lower is better)
Translates to: TSWVSSYCFTFF*SRTGPTSQAWS
Trigger: AGACCAGGCTTGGGATGTGGGGCCTGTCCGGCTCAAGAAGAAAGTGAAGCAGTATGAGCTGACCCAGCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CCA 72 bp TGTCACCTGGTCCTTCTCCCAAGTAATGATGGGAGCTaGCAGCCCTTCAATGTGGCACTCAAAGCGAGCTGT +
Preference number: 6 (lower is better)
Translates to: CHLVLLPSNDGS*QPFNVALKASC
Trigger: ACAGCTCGCTTTGAGTGCCACATTGAAGGGCTGCCAGCTCCCATCATTACTTGGGAGAAGGACCAGGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352385.3
CDS CAA 90 bp TCTGTGTTGGGTTCCAGGTCCCGAACCTGTAGTTCTGTGGTGTCGTaGTTCACTGCAAACTGGTATTCCACATTGTCCATGCCCCGTGCC +
Preference number: 6 (lower is better)
Translates to: SVLGSRSRTCSSVVS*FTANWYSTLSMPRA
Trigger: GGCACGGGGCATGGACAATGTGGAATACCAGTTTGCAGTGAACAACGACACCACAGAACTACAGGTTCGGGACCTGGAACCCAACACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CCA 72 bp GGGAGTAGGCCACCACGTAGAACTCATAATCTGTGTTaGGTTCCAGGTCCCGAACCTGTAGTTCTGTGGTGT +
Preference number: 6 (lower is better)
Translates to: GSRPPRRTHNLC*VPGPEPVVLWC
Trigger: ACACCACAGAACTACAGGTTCGGGACCTGGAACCCAACACAGATTATGAGTTCTACGTGGTGGCCTACTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS TCA 72 bp ATGCACACTTCTTCTGGCCTGAAAGTTACTTCATGGTaGTCTGTGCCTCCTGAGAGCCCCCTAAGGGGTAAG +
Preference number: 6 (lower is better)
Translates to: MHTSSGLKVTSW*SVPPESPLRGK
Trigger: CTTACCCCTTAGGGGGCTCTCAGGAGGCACAGATCACCATGAAGTAACTTTCAGGCCAGAAGAAGTGTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558819.1
CDS GCA 72 bp CAGGTCTTGGAGATGGAGGTCAGGGTTCCCGTTAGATaGACTAAAGTCAGAGTGGACAATGACTTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: QVLEMEVRVPVR*TKVRVDNDFSL
Trigger: GAGGCTGAAGTCATTGTCCACTCTGACTTTAGTGCATCTAACGGGAACCCTGACCTCCATCTCCAAGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352385.3
ENST00000558048.5
ENST00000559327.1
CDS CCA 72 bp ACCTGTAGTTCTGTGGTGTCGTTGTTCACTGCAAACTaGTATTCCACATTGTCCATGCCCCGTGCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: TCSSVVSLFTAN*YSTLSMPRAFW
Trigger: CCAGAAGGCACGGGGCATGGACAATGTGGAATACCAGTTTGCAGTGAACAACGACACCACAGAACTACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CCA 72 bp GCCGTGAGACTGCACTGCAAACTCGTATTTGGTGAATaGCTTCAAGCCGCCAATGAGGATGTCTTCTCCAGA +
Preference number: 6 (lower is better)
Translates to: AVRLHCKLVFGE*LQAANEDVFSR
Trigger: TCTGGAGAAGACATCCTCATTGGCGGCTTGAAGCCATTCACCAAATACGAGTTTGCAGTGCAGTCTCACGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CCA 72 bp CTGTGTTGGGTTCCAGGTCCCGAACCTGTAGTTCTGTaGTGTCGTTGTTCACTGCAAACTGGTATTCCACAT +
Preference number: 6 (lower is better)
Translates to: LCWVPGPEPVVL*CRCSLQTGIPH
Trigger: ATGTGGAATACCAGTTTGCAGTGAACAACGACACCACAGAACTACAGGTTCGGGACCTGGAACCCAACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS CAA 72 bp GGTTCCAGGTCCCGAACCTGTAGTTCTGTGGTGTCGTaGTTCACTGCAAACTGGTATTCCACATTGTCCATG +
Preference number: 6 (lower is better)
Translates to: GSRSRTCSSVVS*FTANWYSTLSM
Trigger: CATGGACAATGTGGAATACCAGTTTGCAGTGAACAACGACACCACAGAACTACAGGTTCGGGACCTGGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS TCA 72 bp CCAGCCGAAATCCGTACTCGATACACCTTGTTTGGCTaGAGCGAGTTCAGCATAAGCTGTGTCTCATTTCCT +
Preference number: 6 (lower is better)
Translates to: PAEIRTRYTLFG*SEFSISCVSFP
Trigger: AGGAAATGAGACACAGCTTATGCTGAACTCGCTTCAGCCAAACAAGGTGTATCGAGTACGGATTTCGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1
CDS TCA 72 bp GCCAATTCAGACCGAGGGAGACACAACAAGAAGTGGTaGTTAGCGGTCAGATACTGCCAGCAGAATGAATTC +
Preference number: 6 (lower is better)
Translates to: ANSDRGRHNKKW*LAVRYCQQNEF
Trigger: GAATTCATTCTGCTGGCAGTATCTGACCGCTAATCACCACTTCTTGTTGTGTCTCCCTCGGTCTGAATTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558819.1
CDS CCA 72 bp TGTACCAGCCGAAATCCGTACTCGATACACCTTGTTTaGCTGAAGCGAGTTCAGCATAAGCTGTGTCTCATT +
Preference number: 6 (lower is better)
Translates to: CTSRNPYSIHLV*LKRVQHKLCLI
Trigger: AATGAGACACAGCTTATGCTGAACTCGCTTCAGCCAAACAAGGTGTATCGAGTACGGATTTCGGCTGGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352385.3
ENST00000559327.1