RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGDCC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000174498

Ensembl transcript IDs: ENST00000327987.9, ENST00000558354.5, ENST00000559058.1, ENST00000559231.1, ENST00000559947.1

Found 289 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCCACACACCCATCCCACACATGGTACATTCCAGGGGCCGGGCCTaGAGGACAGGAGGCAGGCGGCCAGCTGATGCCACCCTCCCAAGC +
Preference number: 1 (lower is better)
Translates to: SHTPIPHMVHSRGRA*RTGGRRPADATLPS
Trigger: GCTTGGGAGGGTGGCATCAGCTGGCCGCCTGCCTCCTGTCCTGCAGGCCCGGCCCCTGGAATGTACCATGTGTGGGATGGGTGTGTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR CCA 90 bp CGCACCCTTCCCAAGGGAGAGGGAGGCTCCCGAGAGAAGCTGCTTTaGGAACAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGG +
Preference number: 1 (lower is better)
Translates to: RTLPKGEGGSREKLL*EQRGHCLGALWSPG
Trigger: CCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTGTTCCCAAAGCAGCTTCTCTCGGGAGCCTCCCTCTCCCTTGGGAAGGGTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR GCA 90 bp GAGGGAGGCTCCCGAGAGAAGCTGCTTTGGGAACAGAGGGGGCACTaGCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTTGG +
Preference number: 1 (lower is better)
Translates to: EGGSREKLLWEQRGH*LGALWSPGHPHIIW
Trigger: CCAAATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTGTTCCCAAAGCAGCTTCTCTCGGGAGCCTCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR CCA 90 bp CACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTTaGGAGAAGGGAAGGGACTACCCTTCCCCAAGTCCACGCGGACAC +
Preference number: 1 (lower is better)
Translates to: HCLGALWSPGHPHII*EKGRDYPSPSPRGH
Trigger: GTGTCCGCGTGGACTTGGGGAAGGGTAGTCCCTTCCCTTCTCCCAAATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR CCA 90 bp AGGCTCCCGAGAGAAGCTGCTTTGGGAACAGAGGGGGCACTGCCTTaGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTTGGGAGAA +
Preference number: 1 (lower is better)
Translates to: RLPREAALGTEGALP*SFVEPWASTHHLGE
Trigger: TTCTCCCAAATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTGTTCCCAAAGCAGCTTCTCTCGGGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR CCA 90 bp GCCCAATCCATTTCTATTTCTGTAGGCCACAAGAGTTCCCCTTGGTaGCCCAACCTCTGGCCTCTCCTCTGCAGGAGAGGTAGGTGGGCT +
Preference number: 1 (lower is better)
Translates to: AQSISISVGHKSSPW*PNLWPLLCRRGRWA
Trigger: AGCCCACCTACCTCTCCTGCAGAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATAGAAATGGATTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR TCA 90 bp GGAGGCAGGTCCAGTGACAACACAGCCCACAGAGCCAGCGAGCCTTaGGGTAGACATTTTCTTTCACATCTGGAAATGGGGAAGTGCTTT +
Preference number: 1 (lower is better)
Translates to: GGRSSDNTAHRASEP*GRHFLSHLEMGKCF
Trigger: AAAGCACTTCCCCATTTCCAGATGTGAAAGAAAATGTCTACCTCAAGGCTCGCTGGCTCTGTGGGCTGTGTTGTCACTGGACCTGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR GCA 90 bp CTGGCTCAAAATGGGAGTGGACAGACAAGACGGGGACAGGCGGTGTaGTGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAA +
Preference number: 1 (lower is better)
Translates to: LAQNGSGQTRRGQAV*WEVARLDNLYFKEQ
Trigger: TTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCTTGTCTGTCCACTCCCATTTTGAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR CCA 90 bp ATGGGAGTGGACAGACAAGACGGGGACAGGCGGTGTGCTGGGAGGTaGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTC +
Preference number: 1 (lower is better)
Translates to: MGVDRQDGDRRCAGR*LVWTIYTSRNKFPL
Trigger: GAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCTTGTCTGTCCACTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR CCA 90 bp GCTCAAAATGGGAGTGGACAGACAAGACGGGGACAGGCGGTGTGCTaGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATT +
Preference number: 1 (lower is better)
Translates to: AQNGSGQTRRGQAVC*EVARLDNLYFKEQI
Trigger: AATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCTTGTCTGTCCACTCCCATTTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR-3UTR GCA 90 bp GCCCCAGCCGCACCCTTCCCAAGGGAGAGGGAGGCTCCCGAGAGAAGCTGCTTTGCTGCTGACAGTGGATaGTCCCCTGTCGAGGGGTGG +
Preference number: 2 (lower is better)
Translates to: APAAPFPREREAPERSCFAADSG*SPVEGW
Trigger: CCACCCCTCGACAGGGGAGCATCCACTGTCAGCAGC...AAAGCAGCTTCTCTCGGGAGCCTCCCTCTCCCTTGGGAAGGGTGCGGCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR CAA 90 bp CCGCACCCTTCCCAAGGGAGAGGGAGGCTCCCGAGAGAAGCTGCTTaGGGAACAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: PHPSQGRGRLPREAA*GTEGALPWSFVEPW
Trigger: CCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTGTTCCCAAAGCAGCTTCTCTCGGGAGCCTCCCTCTCCCTTGGGAAGGGTGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR-3UTR CCA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTGTGGATCAGGCTGGCTaGGTGCCTGAGGCTGGGGCG +
Preference number: 2 (lower is better)
Translates to: QRGHCLGALWSPGHPHIIVDQAG*VPEAGA
Trigger: CGCCCCAGCCTCAGGCACCCAGCCAGCCTGATCCAC...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR-3UTR CCA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTTGCATTCGGGCTCTGTaGGGTAAGGGGGCTGAGGCC +
Preference number: 2 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSCIRAL*GKGAEA
Trigger: GGCCTCAGCCCCCTTACCCCACAGAGCCCGAATGCA...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR-3UTR CCA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTCACCCATCCCACACATaGTACATTCCAGGGGCCGGG +
Preference number: 2 (lower is better)
Translates to: QRGHCLGALWSPGHPHIIHPSHT*YIPGAG
Trigger: CCCGGCCCCTGGAATGTACCATGTGTGGGATGGGTG...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR-3UTR TCA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTCCCAGCAAGGGGACTTaGGGTAGGAGTGCATTCGGG +
Preference number: 2 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSPSKGT*GRSAFG
Trigger: CCCGAATGCACTCCTACCTCAAGTCCCCTTGCTGGG...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR-3UTR GCA 90 bp AGACAAGACGGGGACAGGCGGTGTGCTGGGAGGTGGCTCGTTTGGACAATTTATAGGCCACCGCCCCACTaGCCCCCAGGACATTCATTC +
Preference number: 2 (lower is better)
Translates to: RQDGDRRCAGRWLVWTIYRPPPH*PPGHSF
Trigger: GAATGAATGTCCTGGGGGGCAGTGGGGCGGTGGCCT...ATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCTTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR CAA 90 bp CGAGAGAAGCTGCTTTGGGAACAGAGGGGGCACTGCCTTGGAGCTTaGTGGAGCCCTGGGCATCCACACATCATTTGGGAGAAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: REKLLWEQRGHCLGA*WSPGHPHIIWEKGR
Trigger: CCTTCCCTTCTCCCAAATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTGTTCCCAAAGCAGCTTCTCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR-3UTR TCA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTGGCTGCCTTGGGTTTTaGCAACCCAAGAGGCAGTCA +
Preference number: 2 (lower is better)
Translates to: QRGHCLGALWSPGHPHIIGCLGF*QPKRQS
Trigger: TGACTGCCTCTTGGGTTGTCAAAACCCAAGGCAGCC...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR-3UTR GCA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTGAAGGAACAGGCTCCTaGAGGAACTGCTCCAACTCC +
Preference number: 2 (lower is better)
Translates to: QRGHCLGALWSPGHPHIIEGTGS*RNCSNS
Trigger: GGAGTTGGAGCAGTTCCTGCAGGAGCCTGTTCCTTC...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR-3UTR CCA 90 bp AGCCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAAAGAGTTCCCCTTGGTaGCCCAACCTCTGGCCTCTC +
Preference number: 2 (lower is better)
Translates to: SPGSSWASPSRMGWLKMGKSSPW*PNLWPL
Trigger: GAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTT...TCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR-3UTR TCA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTATCTTGCTTTTGACCTaGGAATGGGCCCCGCTCCGT +
Preference number: 2 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSILLLT*EWAPLR
Trigger: ACGGAGCGGGGCCCATTCTCAGGTCAAAAGCAAGAT...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR-3UTR CCA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTAATAGCTTCCGGCCATaGCTGCTGACAGTGGATGCT +
Preference number: 2 (lower is better)
Translates to: QRGHCLGALWSPGHPHIINSFRP*LLTVDA
Trigger: AGCATCCACTGTCAGCAGCCATGGCCGGAAGCTATT...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR-3UTR CCA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTAGAAAACAAAGTCGGTaGAGGGTGACAGTGTCAGGG +
Preference number: 2 (lower is better)
Translates to: QRGHCLGALWSPGHPHIIRKQSR*RVTVSG
Trigger: CCCTGACACTGTCACCCTCCACCGACTTTGTTTTCT...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR-3UTR CCA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTGGGAGGTGGCTCGTTTaGACAATTTATACTTCAAGG +
Preference number: 2 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSGRWLV*TIYTSR
Trigger: CCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCC...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR-3UTR TCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATAACTGCTCCAACTCCTaGTGGGTGTTAGGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: WEVARLDNLYFKEQISSHNCSNS*WVLGPG
Trigger: CCCCGGCCCTAACACCCATCAGGAGTTGGAGCAGTT...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR-3UTR GCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATCTCTGGCCTCTCCTCTaGAGGAGAGGTAGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: WEVARLDNLYFKEQISSHLWPLL*RRGRWA
Trigger: AGCCCACCTACCTCTCCTGCAGAGGAGAGGCCAGAG...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR-3UTR CCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATCTGTCAAGGCTGCCTTaGGTTTTGACAACCCAAGAG +
Preference number: 2 (lower is better)
Translates to: WEVARLDNLYFKEQISSHLSRLP*VLTTQE
Trigger: CTCTTGGGTTGTCAAAACCCAAGGCAGCCTTGACAG...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR CCA 72 bp CCCAAGGGAGAGGGAGGCTCCCGAGAGAAGCTGCTTTaGGAACAGAGGGGGCACTGCCTTGGAGCTTTGTGG +
Preference number: 3 (lower is better)
Translates to: PKGEGGSREKLL*EQRGHCLGALW
Trigger: CCACAAAGCTCCAAGGCAGTGCCCCCTCTGTTCCCAAAGCAGCTTCTCTCGGGAGCCTCCCTCTCCCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR CCA 72 bp ACAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTaGGCATCCACACATCATTTGGGAGAAGGGAAGGGA +
Preference number: 3 (lower is better)
Translates to: TEGALPWSFVEP*ASTHHLGEGKG
Trigger: TCCCTTCCCTTCTCCCAAATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR CCA 72 bp CAAGCCCAGGTTCCTCATGGGCATCCCCATCAAGGATaGGCTGGCTCAAAATGGGAGTGGACAGACAAGACG +
Preference number: 3 (lower is better)
Translates to: QAQVPHGHPHQG*AGSKWEWTDKT
Trigger: CGTCTTGTCTGTCCACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR-3UTR CAA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTGGTGTCCCTAGAGGATaGGGGGTCAGGGATATTTAT +
Preference number: 3 (lower is better)
Translates to: QRGHCLGALWSPGHPHIIGVPRG*GVRDIY
Trigger: ATAAATATCCCTGACCCCCAATCCTCTAGGGACACC...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR CCA 72 bp GGGAGTGGACAGACAAGACGGGGACAGGCGGTGTGCTaGGAGGTGGCTCGTTTGGACAATTTATACTTCAAG +
Preference number: 3 (lower is better)
Translates to: GSGQTRRGQAVC*EVARLDNLYFK
Trigger: CTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCTTGTCTGTCCACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR-3UTR CAA 90 bp TATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCCTGTCAAGGCTGCCTaGGGTTTTGACAACCCAAGA +
Preference number: 3 (lower is better)
Translates to: YFCRPQEFPLVAQPLASPPVKAA*GFDNPR
Trigger: TCTTGGGTTGTCAAAACCCAAGGCAGCCTTGACAGG...AGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR GCA 72 bp AATGGGAGTGGACAGACAAGACGGGGACAGGCGGTGTaGTGGGAGGTGGCTCGTTTGGACAATTTATACTTC +
Preference number: 3 (lower is better)
Translates to: NGSGQTRRGQAV*WEVARLDNLYF
Trigger: GAAGTATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCTTGTCTGTCCACTCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR CCA 72 bp ATTTCTATTTCTGTAGGCCACAAGAGTTCCCCTTGGTaGCCCAACCTCTGGCCTCTCCTCTGCAGGAGAGGT +
Preference number: 3 (lower is better)
Translates to: ISISVGHKSSPW*PNLWPLLCRRG
Trigger: ACCTCTCCTGCAGAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR-3UTR CAA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTCAGCAGGGTCATCTTTaGGAGTCTAATTCACCTTCC +
Preference number: 3 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSQQGHL*ESNSPS
Trigger: GGAAGGTGAATTAGACTCCAAAAGATGACCCTGCTG...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR TCA 72 bp TCCAGTGACAACACAGCCCACAGAGCCAGCGAGCCTTaGGGTAGACATTTTCTTTCACATCTGGAAATGGGG +
Preference number: 3 (lower is better)
Translates to: SSDNTAHRASEP*GRHFLSHLEMG
Trigger: CCCCATTTCCAGATGTGAAAGAAAATGTCTACCTCAAGGCTCGCTGGCTCTGTGGGCTGTGTTGTCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR CCA 72 bp GACGGGGACAGGCGGTGTGCTGGGAGGTGGCTCGTTTaGACAATTTATACTTCAAGGAACAAATTTCCTCTC +
Preference number: 3 (lower is better)
Translates to: DGDRRCAGRWLV*TIYTSRNKFPL
Trigger: GAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR CCA 72 bp GACAGACAAGACGGGGACAGGCGGTGTGCTGGGAGGTaGCTCGTTTGGACAATTTATACTTCAAGGAACAAA +
Preference number: 3 (lower is better)
Translates to: DRQDGDRRCAGR*LVWTIYTSRNK
Trigger: TTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCTTGTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR-3UTR CAA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATCCACAAGAGTTCCCCTaGGTGGCCCAACCTCTGGCC +
Preference number: 3 (lower is better)
Translates to: WEVARLDNLYFKEQISSHPQEFP*VAQPLA
Trigger: GGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGG...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp GCCCCAGCCGCACCCTTCCCAAGGGAGAGGGAGGCTCCCGAGAGAAGCTGCTTTAAGCCGCCCTCGTGCTaGGCCAGCCGGGGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: APAAPFPREREAPERSCFKPPSC*ASRGQG
Trigger: GCCTTGGCCCCGGCTGGCCCAGCACGAGGGCGGCTT...AAAGCAGCTTCTCTCGGGAGCCTCCCTCTCCCTTGGGAAGGGTGCGGCTGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp GCCCCAGCCGCACCCTTCCCAAGGGAGAGGGAGGCTCCCGAGAGAAGCTGCTTTGCCCAGGACTCGCACTaGCAGTGGGGGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: APAAPFPREREAPERSCFAQDSH*QWGWGR
Trigger: CCTGCCCCACCCCCACTGTCAGTGCGAGTCCTGGGC...AAAGCAGCTTCTCTCGGGAGCCTCCCTCTCCCTTGGGAAGGGTGCGGCTGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp GCCCCAGCCGCACCCTTCCCAAGGGAGAGGGAGGCTCCCGAGAGAAGCTGCTTTAGACTGCCCGCACATTaGGGGGAGGCCCGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: APAAPFPREREAPERSCFRLPAH*GEARGA
Trigger: GGCTCCCCGGGCCTCCCCGCAATGTGCGGGCAGTCT...AAAGCAGCTTCTCTCGGGAGCCTCCCTCTCCCTTGGGAAGGGTGCGGCTGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp GCCCCAGCCGCACCCTTCCCAAGGGAGAGGGAGGCTCCCGAGAGAAGCTGCTTTAGGGGGAGCGCCGCTTaGGCCATCTTGCACCCACCC +
Preference number: 4 (lower is better)
Translates to: APAAPFPREREAPERSCFRGSAA*AILHPP
Trigger: GGGTGGGTGCAAGATGGCGCAAGCGGCGCTCCCCCT...AAAGCAGCTTCTCTCGGGAGCCTCCCTCTCCCTTGGGAAGGGTGCGGCTGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp GCCCCAGCCGCACCCTTCCCAAGGGAGAGGGAGGCTCCCGAGAGAAGCTGCTTTCGGGGACAGGCGGTGTaGTGGGAGGTGGCTCGTTTG +
Preference number: 4 (lower is better)
Translates to: APAAPFPREREAPERSCFRGQAV*WEVARL
Trigger: CAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCG...AAAGCAGCTTCTCTCGGGAGCCTCCCTCTCCCTTGGGAAGGGTGCGGCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTGGGACTGGGGCCGCATaGCTGCTCAGCAGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: QRGHCLGALWSPGHPHIIGTGAA*LLSSAG
Trigger: CCCCGCGCTGCTGAGCAGGCATGCGGCCCCAGTCCC...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTTCCAGGGGCCGGGCCTaGAGGACAGGAGGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: QRGHCLGALWSPGHPHIISRGRA*RTGGRR
Trigger: CCGCCTGCCTCCTGTCCTGCAGGCCCGGCCCCTGGA...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp GCCCCAGCCGCACCCTTCCCAAGGGAGAGGGAGGCTCCCGAGAGAAGCTGCTTTCCAGGTGATTCGCACTaGAGGGGTCCCCTCCACCCT +
Preference number: 4 (lower is better)
Translates to: APAAPFPREREAPERSCFPGDSH*RGPLHP
Trigger: AGGGTGGAGGGGACCCCTCCAGTGCGAATCACCTGG...AAAGCAGCTTCTCTCGGGAGCCTCCCTCTCCCTTGGGAAGGGTGCGGCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp GCCCCAGCCGCACCCTTCCCAAGGGAGAGGGAGGCTCCCGAGAGAAGCTGCTTTGGCGGTGGCTCACCCTaGGCTTGGCAGGTGAACATG +
Preference number: 4 (lower is better)
Translates to: APAAPFPREREAPERSCFGGGSP*AWQVNM
Trigger: CATGTTCACCTGCCAAGCCCAGGGTGAGCCACCGCC...AAAGCAGCTTCTCTCGGGAGCCTCCCTCTCCCTTGGGAAGGGTGCGGCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp GCCCCAGCCGCACCCTTCCCAAGGGAGAGGGAGGCTCCCGAGAGAAGCTGCTTTGAGGGGGCACTGCCTTaGAGCTTTGTGGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: APAAPFPREREAPERSCFEGALP*SFVEPW
Trigger: CCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTC...AAAGCAGCTTCTCTCGGGAGCCTCCCTCTCCCTTGGGAAGGGTGCGGCTGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp GCCCCAGCCGCACCCTTCCCAAGGGAGAGGGAGGCTCCCGAGAGAAGCTGCTTTTGGTCCCAGCTGGCCTaGAGATGGACTGGGGATGCT +
Preference number: 4 (lower is better)
Translates to: APAAPFPREREAPERSCFWSQLA*RWTGDA
Trigger: AGCATCCCCAGTCCATCTCCAGGCCAGCTGGGACCA...AAAGCAGCTTCTCTCGGGAGCCTCCCTCTCCCTTGGGAAGGGTGCGGCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp AGCCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGCCTCCATCTGGGGGTaGTGGGGCAGCCGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SPGSSWASPSRMGWLKMGASIWG*WGSRQA
Trigger: GGCCTGGCGGCTGCCCCACCACCCCCAGATGGAGGC...TCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTGCCAGGGCCTCCATCTaGGGGTGGTGGGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSARASI*GWWGSR
Trigger: GCGGCTGCCCCACCACCCCCAGATGGAGGCCCTGGC...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp GCCCCAGCCGCACCCTTCCCAAGGGAGAGGGAGGCTCCCGAGAGAAGCTGCTTTGGCTCCAGCCTGAAGTaGCGGATCATCAAGGACCCA +
Preference number: 4 (lower is better)
Translates to: APAAPFPREREAPERSCFGSSLK*RIIKDP
Trigger: TGGGTCCTTGATGATCCGTCACTTCAGGCTGGAGCC...AAAGCAGCTTCTCTCGGGAGCCTCCCTCTCCCTTGGGAAGGGTGCGGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp AGCCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGACCCAGAGCCCGAGCCTaGCACAGTGAGCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SPGSSWASPSRMGWLKMGPRARA*HSEPGP
Trigger: GGGGCCAGGCTCACTGTGTCAGGCTCGGGCTCTGGG...TCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp GCCCCAGCCGCACCCTTCCCAAGGGAGAGGGAGGCTCCCGAGAGAAGCTGCTTTGCAGGACGTAGCCGATaGTCTCCTTGGTGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: APAAPFPREREAPERSCFAGRSR*SPWCWP
Trigger: TGGCCAACACCAAGGAGATCATCGGCTACGTCCTGC...AAAGCAGCTTCTCTCGGGAGCCTCCCTCTCCCTTGGGAAGGGTGCGGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTGGAGACGCGGCGCGCTaGACAGCCATGGGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSGDAAR*TAMGLS
Trigger: CGAGAGCCCCATGGCTGTGCAGCGCGCCGCGTCTCC...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTAGGCTGGGGCGCCTCTaGAGGGGACACCCACACCCC +
Preference number: 4 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSRLGRL*RGHPHP
Trigger: GGGGTGTGGGTGTCCCCTGCAGAGGCGCCCCAGCCT...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp GCCCCAGCCGCACCCTTCCCAAGGGAGAGGGAGGCTCCCGAGAGAAGCTGCTTTGAACAGAGGGGGCACTaGCTTGGAGCTTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: APAAPFPREREAPERSCFEQRGH*LGALWS
Trigger: GCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTGTTC...AAAGCAGCTTCTCTCGGGAGCCTCCCTCTCCCTTGGGAAGGGTGCGGCTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp AGCCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGACAGGCGGTGGGGGACTaGGGCCGCATGCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SPGSSWASPSRMGWLKMGQAVGD*GRMPAQ
Trigger: CTGAGCAGGCATGCGGCCCCAGTCCCCCACCGCCTG...TCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTCGCGCTGCACAGCCATaGGGCTCTCGGTCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: QRGHCLGALWSPGHPHIIRAAQP*GSRSAR
Trigger: CCGAGCTGACCGAGAGCCCCATGGCTGTGCAGCGCG...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATTCCATCTGGGGGTGGTaGGGCAGCCGCCAGGCCGGC +
Preference number: 4 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHSIWGW*GSRQAG
Trigger: GCCGGCCTGGCGGCTGCCCCACCACCCCCAGATGGA...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTCACCAGCCGGCCCTGTaGCGTTCTCCTCACCCGGGT +
Preference number: 4 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSHQPAL*RSPHPG
Trigger: ACCCGGGTGAGGAGAACGGCACAGGGCCGGCTGGTG...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATGGTAACCCGGGCCGCTaGAGGCCTGGAAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHGNPGR*RPGSLA
Trigger: GGCCAGGCTTCCAGGCCTGCAGCGGCCCGGGTTACC...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp GCCCCAGCCGCACCCTTCCCAAGGGAGAGGGAGGCTCCCGAGAGAAGCTGCTTTTCTGCAGGACCCCCTTaGGCAGCAATGTGTACCTCT +
Preference number: 4 (lower is better)
Translates to: APAAPFPREREAPERSCFSAGPP*AAMCTS
Trigger: AGAGGTACACATTGCTGCCCAAGGGGGTCCTGCAGA...AAAGCAGCTTCTCTCGGGAGCCTCCCTCTCCCTTGGGAAGGGTGCGGCTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCGGCGCGGGTTGCCCGTaGCGACACACTCAAGCACCG +
Preference number: 4 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLGAGCP*RHTQAP
Trigger: CGGTGCTTGAGTGTGTCGCCACGGGCAACCCGCGCC...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTCGGTCAGCCTGGCACTaGCCTGTGATGAGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: QRGHCLGALWSPGHPHIIRSAWH*PVMSPH
Trigger: GTGCGGGCTCATCACAGGCCAGTGCCAGGCTGACCG...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCGTGGATCAGGCTGGCTaGGTGCCTGAGGCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLVDQAG*VPEAGA
Trigger: CGCCCCAGCCTCAGGCACCCAGCCAGCCTGATCCAC...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTTGCGAGCCTTCCGGCTaGCCACCAGCCCAAAGCGGT +
Preference number: 4 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSCEPSG*PPAQSG
Trigger: ACCGCTTTGGGCTGGTGGTCAGCCGGAAGGCTCGCA...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp AGCCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAATCAGGCCGCACCCCTaGAGTGGCAGCACGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SPGSSWASPSRMGWLKMGIRPHP*SGSTES
Trigger: GCTCTCCGTGCTGCCACTTCAGGGGTGCGGCCTGAT...TCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp AGCCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGACCGCTTGCGCCATCTTaGACCCACCCGGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: SPGSSWASPSRMGWLKMGPLAPS*THPGDL
Trigger: CAGATCGCCCGGGTGGGTGCAAGATGGCGCAAGCGG...TCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTCGTGACATGAGGCGGTaGCTCACCCTGGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: QRGHCLGALWSPGHPHIIRDMRR*LTLGLA
Trigger: TGCCAAGCCCAGGGTGAGCCACCGCCTCATGTCACG...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCGGCAGCACGGAGAGCTaGGTCTCCTCACACGGAGCG +
Preference number: 4 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLGSTES*VSSHGA
Trigger: CGCTCCGTGTGAGGAGACCCAGCTCTCCGTGCTGCC...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATCGGCGCAGGGAGCCGTaGCCTCTGTGGTCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHRRREP*PLWSSP
Trigger: AGGCGAAGACCACAGAGGCCACGGCTCCCTGCGCCG...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp AGCCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGACTGTTCCGAGTGAGCTaGCTGGGTAACCCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SPGSSWASPSRMGWLKMGLFRVS*LGNPGR
Trigger: GCGGCCCGGGTTACCCAGCCAGCTCACTCGGAACAG...TCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTTGCATTCGGGCTCTGTaGGGTAAGGGGGCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: QRGHCLGALWSPGHPHIICIRAL*GKGAEA
Trigger: GGCCTCAGCCCCCTTACCCCACAGAGCCCGAATGCA...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCTCCCCTGTCGAGGGGTaGATCAGGCTGGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLSPVEG*IRLAGC
Trigger: GCACCCAGCCAGCCTGATCCACCCCTCGACAGGGGA...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATGCCTGGCCCCGTGGCTaGTCCGGATACTGGCGATGT +
Preference number: 4 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHAWPRG*SGYWRC
Trigger: ACATCGCCAGTATCCGGATCAGCCACGGGGCCAGGC...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTTTCAGCCACGTGACATaGGGCGGTGGCTCACCCTGG +
Preference number: 4 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSFSHVT*GGGSPW
Trigger: CCAGGGTGAGCCACCGCCTCATGTCACGTGGCTGAA...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCAGGGCTCCAGGTCGCTaGCCAGGTGCTGAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLRAPGR*PGAERC
Trigger: GCACCTTTCAGCACCTGGTCAGCGACCTGGAGCCCT...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCGGCGGTAAAACAGCTTaGAGCCGCCCTCGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLGGKTA*SRPRAG
Trigger: CCCAGCACGAGGGCGGCTTCAAGCTGTTTTACCGCC...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp AGCCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGACAATGGGGCGCGGGTTaGCCGTGGCGACACACTCAA +
Preference number: 4 (lower is better)
Translates to: SPGSSWASPSRMGWLKMGQWGAG*PWRHTQ
Trigger: TTGAGTGTGTCGCCACGGGCAACCCGCGCCCCATTG...TCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTACACGGAGCGGGGGCTaGAGGATCCTGTGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSTRSGG*RILCGS
Trigger: AGACCCACACAGGATCCTGCAGCCCCCGCTCCGTGT...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTGCTGCTGACAGTGGATaGTCCCCTGTCGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSAADSG*SPVEGW
Trigger: CCACCCCTCGACAGGGGAGCATCCACTGTCAGCAGC...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp AGCCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGATCACCCACGGTGGCCTaGGGATGCACGTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SPGSSWASPSRMGWLKMGSPTVA*GCTWKS
Trigger: GGACTTCCACGTGCATCCCCAGGCCACCGTGGGTGA...TCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATCCTCCTCACCCACGGTaGCCTGGGGATGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHPPHPR*PGDARG
Trigger: TCCACGTGCATCCCCAGGCCACCGTGGGTGAGGAGG...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTGTGAGCCTGGCCCCGTaGCTGATCCGGATACTGGCG +
Preference number: 4 (lower is better)
Translates to: YFCRPQEFPLVAQPLASPVSLAP*LIRILA
Trigger: CGCCAGTATCCGGATCAGCCACGGGGCCAGGCTCAC...AGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp AGCCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGACCCCACGAGGATGGCTaGCTCCTTGTAGGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: SPGSSWASPSRMGWLKMGPHEDG*LLVGPR
Trigger: TCTGGGGCCTACAAGGAGCCAGCCATCCTCGTGGGG...TCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATGGCTGTGGTCCCAGCTaGCCTGGAGATGGACTGGGG +
Preference number: 4 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHGCGPS*PGDGLG
Trigger: CCCCAGTCCATCTCCAGGCCAGCTGGGACCACAGCC...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTGGCTCACCCTGGGCTTaGCAGGTGAACATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QRGHCLGALWSPGHPHIIGSPWA*QVNMAV
Trigger: CACAGCCATGTTCACCTGCCAAGCCCAGGGTGAGCC...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCCCTGACGTGGCCTCCTaGCCCCAGCACCTGTCCATT +
Preference number: 4 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLPDVAS*PQHLSI
Trigger: AATGGACAGGTGCTGGGGCCAGGAGGCCACGTCAGG...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCCCTGTGGTGGACGTCTaGTTGGCGGCCTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLPVVDV*LAASSF
Trigger: GAAGGAGGAGGCCGCCAACCAGACGTCCACCACAGG...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTGATCCTGTGTGGGTCTaGGGTCCGGCTGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: YFCRPQEFPLVAQPLASPDPVWV*GPAALL
Trigger: CAGCAGGGCAGCCGGACCCCAGACCCACACAGGATC...AGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTGAGCCGTGGCCTCTGTaGTCTTCGCCTCCGTCGTCT +
Preference number: 4 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSEPWPL*SSPPSS
Trigger: AGACGACGGAGGCGAAGACCACAGAGGCCACGGCTC...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp AGACAAGACGGGGACAGGCGGTGTGCTGGGAGGTGGCTCGTTTGGACAATTTATGCTCCGTCCACCCTCTaGAGCCTGCCAGACACTGGC +
Preference number: 4 (lower is better)
Translates to: RQDGDRRCAGRWLVWTIYAPSTL*SLPDTG
Trigger: GCCAGTGTCTGGCAGGCTCCAGAGGGTGGACGGAGC...ATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCTTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp AGCCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGACTCCCGGCTCCAGCCTaGAGTGACGGATCATCAAGG +
Preference number: 4 (lower is better)
Translates to: SPGSSWASPSRMGWLKMGLPAPA*SDGSSR
Trigger: CCTTGATGATCCGTCACTTCAGGCTGGAGCCGGGAG...TCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTCAGCTCGAAGTCCTGTaGTCTGCAGGACCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSQLEVL*SAGPPW
Trigger: CCAAGGGGGTCCTGCAGATCACAGGACTTCGAGCTG...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATTGGGGTCGAGCTGGCTaGGGTTGTAGGAGGAGACGG +
Preference number: 4 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHWGRAG*GCRRRR
Trigger: CCGTCTCCTCCTACAACCTCAGCCAGCTCGACCCCA...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTCGATGTGGATGCCGATaGCGATGCCTGTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSRCGCR*RCLWWT
Trigger: CGTCCACCACAGGCATCGTCATCGGCATCCACATCG...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp AGACAAGACGGGGACAGGCGGTGTGCTGGGAGGTGGCTCGTTTGGACAATTTATAAGCCTGGCCTTCACTaGGGAGGCCAGGGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: RQDGDRRCAGRWLVWTIYKPGLH*GGQGLH
Trigger: ATGGAGGCCCTGGCCTCCTCAGTGAAGGCCAGGCTT...ATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCTTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp TATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTAGGCCACCGCCCCACTaGCCCCCAGGACATTCATTC +
Preference number: 4 (lower is better)
Translates to: YFCRPQEFPLVAQPLASPRPPPH*PPGHSF
Trigger: GAATGAATGTCCTGGGGGGCAGTGGGGCGGTGGCCT...AGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp AGCCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGACTCTGGCCTCTCCTCTaGAGGAGAGGTAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SPGSSWASPSRMGWLKMGLWPLL*RRGRWA
Trigger: AGCCCACCTACCTCTCCTGCAGAGGAGAGGCCAGAG...TCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp AGACAAGACGGGGACAGGCGGTGTGCTGGGAGGTGGCTCGTTTGGACAATTTATGCCAGTTCAGCAGAGTaGCCAAGACCCTCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: RQDGDRRCAGRWLVWTIYASSAE*PRPSLG
Trigger: GCCGAGCGAGGGTCTTGGCCACTCTGCTGAACTGGC...ATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCTTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTGGAAGCCCATGGATTTaGCACTGGAAGCGGGCCACA +
Preference number: 4 (lower is better)
Translates to: QRGHCLGALWSPGHPHIIGSPWI*HWKRAT
Trigger: TGTGGCCCGCTTCCAGTGCCAAATCCATGGGCTTCC...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCCTGTGCCCAGCACCTaGATGCCCTCCACCCCGATA +
Preference number: 4 (lower is better)
Translates to: YFCRPQEFPLVAQPLASPPVPST*MPSTPI
Trigger: TATCGGGGTGGAGGGCATCCAGGTGCTGGGCACAGG...AGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCCCGGCAGTCACATGGTaGGCTCAAGGCTGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLPAVTW*AQGCPL
Trigger: GAGAGGACAGCCTTGAGCCCACCATGTGACTGCCGG...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTGGACAGGCGGTGTGCTaGGAGGTGGCTCGTTTGGAC +
Preference number: 4 (lower is better)
Translates to: YFCRPQEFPLVAQPLASPGQAVC*EVARLD
Trigger: GTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCC...AGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp TATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTAACTGCTCCAACTCCTaGTGGGTGTTAGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: YFCRPQEFPLVAQPLASPNCSNS*WVLGPG
Trigger: CCCCGGCCCTAACACCCATCAGGAGTTGGAGCAGTT...AGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATCCCAGCAAGGGGACTTaGGGTAGGAGTGCATTCGGG +
Preference number: 4 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHPSKGT*GRSAFG
Trigger: CCCGAATGCACTCCTACCTCAAGTCCCCTTGCTGGG...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp AGACAAGACGGGGACAGGCGGTGTGCTGGGAGGTGGCTCGTTTGGACAATTTATACGGTGGCCTGGGGATaGACGTGGAAGTCCGACATG +
Preference number: 4 (lower is better)
Translates to: RQDGDRRCAGRWLVWTIYTVAWG*TWKSDM
Trigger: CATGTCGGACTTCCACGTGCATCCCCAGGCCACCGT...ATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCTTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTATGGACTGGGGATGCTaGACAAACTCAGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: QRGHCLGALWSPGHPHIIMDWGC*TNSAGA
Trigger: AGCCCCAGCTGAGTTTGTGCAGCATCCCCAGTCCAT...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATGCTGCAAGGAGGAGCTaGCCAGGACTCGCACTGACA +
Preference number: 4 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHAARRS*PGLALT
Trigger: TGTCAGTGCGAGTCCTGGGCAGCTCCTCCTTGCAGC...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTCTTCACCTCATACACTaGAGTGGGGTCGAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QRGHCLGALWSPGHPHIILHLIH*SGVELA
Trigger: AGCCAGCTCGACCCCACTGCAGTGTATGAGGTGAAG...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTCATTGGCCAGCAAGGTaGAGTGGGTACTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: QRGHCLGALWSPGHPHIIHWPAR*SGYSLA
Trigger: TGCCAGAGAGTACCCACTCCACCTTGCTGGCCAATG...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp AGCCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGCCTGGGGATGCACGTaGAAGTCCGACATGGTTGCA +
Preference number: 4 (lower is better)
Translates to: SPGSSWASPSRMGWLKMGAWGCT*KSDMVA
Trigger: TGCAACCATGTCGGACTTCCACGTGCATCCCCAGGC...TCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATCCATGGATTTGGCACTaGAAGCGGGCCACACCACCC +
Preference number: 4 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHPWIWH*KRATPP
Trigger: GGGTGGTGTGGCCCGCTTCCAGTGCCAAATCCATGG...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCTGCACAAACTCAGCTaGGGCTTGCACCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: YFCRPQEFPLVAQPLASPLHKLS*GLHHQP
Trigger: CGGCTGGTGGTGCAAGCCCCAGCTGAGTTTGTGCAG...AGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTCAGCTGGCCTGGAGATaGACTGGGGATGCTGCACAA +
Preference number: 4 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSQLAWR*TGDAAQ
Trigger: TTGTGCAGCATCCCCAGTCCATCTCCAGGCCAGCTG...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp AGCCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAACAGTACGGTCAGCCTaGCACTGGCCTGTGATGAGC +
Preference number: 4 (lower is better)
Translates to: SPGSSWASPSRMGWLKMGTVRSA*HWPVMS
Trigger: GCTCATCACAGGCCAGTGCCAGGCTGACCGTACTGT...TCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATCATTCTTCCTCCAGGTaGTTCGCACTGGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHHSSSR*FALEGS
Trigger: GGACCCCTCCAGTGCGAATCACCTGGAGGAAGAATG...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTTGGCTCCACAGCAAATaGCAGTTCAGCAGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSWLHSK*QFSRVA
Trigger: GGCCACTCTGCTGAACTGGCATTTGCTGTGGAGCCA...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATTCCAGCACTATAGGCTaGCCGGGGACGGCAACATCA +
Preference number: 4 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHSSTIG*PGTATS
Trigger: TGATGTTGCCGTCCCCGGGCAGCCTATAGTGCTGGA...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCCCACACAGTGGAAGATaGCACCGTCCTCAGCTCGAA +
Preference number: 4 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLPHSGR*HRPQLE
Trigger: TTCGAGCTGAGGACGGTGGCATCTTCCACTGTGTGG...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp TATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTGCCAGGTCTGTTGGCTaGACAGACGTAGACGCCAGA +
Preference number: 4 (lower is better)
Translates to: YFCRPQEFPLVAQPLASPARSVG*TDVDAR
Trigger: TCTGGCGTCTACGTCTGTGCAGCCAACAGACCTGGC...AGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp TATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTTACACAGGAGGACCCTaGCCCTTTGGCCGAACAGGA +
Preference number: 4 (lower is better)
Translates to: YFCRPQEFPLVAQPLASPYTGGP*PFGRTG
Trigger: TCCTGTTCGGCCAAAGGGGCAGGGTCCTCCTGTGTA...AGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCCATTTAGGGCTAGAATaGCAGGGTCCCTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLHLGLE*QGPSGS
Trigger: GGAGCCAGAGGGACCCTGGCATTCTAGCCCTAAATG...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATCCACCCTCTGGAGCCTaGCAGACACTGGCTACTGTT +
Preference number: 4 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHPPSGA*QTLATV
Trigger: AACAGTAGCCAGTGTCTGGCAGGCTCCAGAGGGTGG...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp AGCCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGAAGGAACAGGCTCCTaGAGGAACTGCTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: SPGSSWASPSRMGWLKMGEGTGS*RNCSNS
Trigger: GGAGTTGGAGCAGTTCCTGCAGGAGCCTGTTCCTTC...TCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp AGACAAGACGGGGACAGGCGGTGTGCTGGGAGGTGGCTCGTTTGGACAATTTATGCCAGCAAGGTGGAGTaGGTACTCTCTGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RQDGDRRCAGRWLVWTIYASKVE*VLSGSS
Trigger: AGAGCTGCCAGAGAGTACCCACTCCACCTTGCTGGC...ATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp AGACAAGACGGGGACAGGCGGTGTGCTGGGAGGTGGCTCGTTTGGACAATTTATGACATGGTTGCAGCTTaGATGCGAGCCTTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: RQDGDRRCAGRWLVWTIYDMVAA*MRAFRL
Trigger: CAGCCGGAAGGCTCGCATCCAAGCTGCAACCATGTC...ATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp AGCCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGACGTGGAAGTCCGACATaGTTGCAGCTTGGATGCGAG +
Preference number: 4 (lower is better)
Translates to: SPGSSWASPSRMGWLKMGRGSPT*LQLGCE
Trigger: CTCGCATCCAAGCTGCAACCATGTCGGACTTCCACG...TCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCGGCCTGGAGATGGACTaGGGATGCTGCACAAACTCA +
Preference number: 4 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLGLEMD*GCCTNS
Trigger: TGAGTTTGTGCAGCATCCCCAGTCCATCTCCAGGCC...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTATACTCCAGCTCCGGTaGGTCAGCAGCCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSILQLR*VSSLPD
Trigger: ATCAGGAAGGCTGCTGACCCACCGGAGCTGGAGTAT...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATGAGCCTGCCAGACACTaGCTACTGTTCCGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHEPARH*LLFRVS
Trigger: GCTCACTCGGAACAGTAGCCAGTGTCTGGCAGGCTC...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp AGACAAGACGGGGACAGGCGGTGTGCTGGGAGGTGGCTCGTTTGGACAATTTATCACAAGAGTTCCCCTTaGTGGCCCAACCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RQDGDRRCAGRWLVWTIYHKSSP*WPNLWP
Trigger: AGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTG...ATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp AGACAAGACGGGGACAGGCGGTGTGCTGGGAGGTGGCTCGTTTGGACAATTTATTGCCTTGGAGCTTTGTaGAGCCCTGGGCATCCACAC +
Preference number: 4 (lower is better)
Translates to: RQDGDRRCAGRWLVWTIYCLGAL*SPGHPH
Trigger: GTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCA...ATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCGAGAGAAGCTGCTTTaGGAACAGAGGGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: YFCRPQEFPLVAQPLASPREKLL*EQRGHC
Trigger: GCAGTGCCCCCTCTGTTCCCAAAGCAGCTTCTCTCG...AGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp TATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTTCGCTGACCAGGTGCTaGAAGGTGCTCTTGCTGACT +
Preference number: 4 (lower is better)
Translates to: YFCRPQEFPLVAQPLASPSLTRC*KVLLLT
Trigger: AGTCAGCAAGAGCACCTTTCAGCACCTGGTCAGCGA...AGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp TATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTATCTTGCTTTTGACCTaGGAATGGGCCCCGCTCCGT +
Preference number: 4 (lower is better)
Translates to: YFCRPQEFPLVAQPLASPILLLT*EWAPLR
Trigger: ACGGAGCGGGGCCCATTCTCAGGTCAAAAGCAAGAT...AGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp TATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTGGCTGCCTTGGGTTTTaGCAACCCAAGAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: YFCRPQEFPLVAQPLASPGCLGF*QPKRQS
Trigger: TGACTGCCTCTTGGGTTGTCAAAACCCAAGGCAGCC...AGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATGGTGCTCTTGCTGACTaGCTCCTGATACTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHGALAD*LLILQL
Trigger: GAGCTGGAGTATCAGGAGGCAGTCAGCAAGAGCACC...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTGAAGGAGGTCTTGCTTaGTGGGCGGTAAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: QRGHCLGALWSPGHPHIIEGGLA*WAVKQL
Trigger: AAGCTGTTTTACCGCCCAGCAAGCAAGACCTCCTTC...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCAGCGGACTGTGGCATTaGCATCTCCATGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLSGLWH*HLHAGC
Trigger: ACAACCAGCATGGAGATGGCAATGCCACAGTCCGCT...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTGGCTGTCCTCTCAGATaGTCCCCTCAAAGACACAAA +
Preference number: 4 (lower is better)
Translates to: QRGHCLGALWSPGHPHIIGCPLR*SPQRHK
Trigger: TTTGTGTCTTTGAGGGGAGCATCTGAGAGGACAGCC...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCGGAGTGGGTACTCTCTaGCAGCTCTACCCCATTCTT +
Preference number: 4 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLGVGTL*QLYPIL
Trigger: AAGAATGGGGTAGAGCTGCCAGAGAGTACCCACTCC...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTGGTTTGGGAAGCCCATaGATTTGGCACTGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: YFCRPQEFPLVAQPLASPGLGSP*IWHWKR
Trigger: CCGCTTCCAGTGCCAAATCCATGGGCTTCCCAAACC...AGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCAAGTGACCCCGATGTaGATGCCGATGACGATGCCT +
Preference number: 4 (lower is better)
Translates to: YFCRPQEFPLVAQPLASPQVTPM*MPMTMP
Trigger: AGGCATCGTCATCGGCATCCACATCGGGGTCACTTG...AGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCCATCCCCATCAAGGATaGGCTGGCTCAAAATGGGAG +
Preference number: 4 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLHPHQG*AGSKWE
Trigger: CTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATG...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCAATAGCTTCCGGCCATaGCTGCTGACAGTGGATGCT +
Preference number: 4 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLNSFRP*LLTVDA
Trigger: AGCATCCACTGTCAGCAGCCATGGCCGGAAGCTATT...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATCTGGACCGTCACGTCTaGGATGATGAGGTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHLDRHV*DDEVSC
Trigger: ACAGGAAACCTCATCATCTCAGACGTGACGGTCCAG...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATGGCTGGCTGGGTGCCTaGGGCTGGGGCGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHGWLGA*GWGASA
Trigger: TGCAGAGGCGCCCCAGCCTCAGGCACCCAGCCAGCC...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp GCCCCAGCCGCACCCTTCCCAAGGGAGAGGGAGGCTCCCGAGAGAAGCTGCTTTTTTATTCAGTCAAAATaGGCAGAGTGTGACAAAACC +
Preference number: 4 (lower is better)
Translates to: APAAPFPREREAPERSCFFIQSK*AECDKT
Trigger: GGTTTTGTCACACTCTGCTCATTTTGACTGAATAAA...AAAGCAGCTTCTCTCGGGAGCCTCCCTCTCCCTTGGGAAGGGTGCGGCTGGGGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCGGCAACATCATCACTTaGCTCCACAGCAAATGCCAG +
Preference number: 4 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLGNIIT*LHSKCQ
Trigger: CTGGCATTTGCTGTGGAGCCAAGTGATGATGTTGCC...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATTTTGAGGCCACACAGTaGAAGATGCCACCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHFEATQ*KMPPSS
Trigger: TGAGGACGGTGGCATCTTCCACTGTGTGGCCTCAAA...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTAGAAAACAAAGTCGGTaGAGGGTGACAGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSRKQSR*RVTVSG
Trigger: CCCTGACACTGTCACCCTCCACCGACTTTGTTTTCT...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCCGGTGTGCTGGGAGGTaGCTCGTTTGGACAATTTAT +
Preference number: 4 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLRCAGR*LVWTIY
Trigger: ATAAATTGTCCAAACGAGCCACCTCCCAGCACACCG...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTCATCCACACATCATTTaGGAGAAGGGAAGGGACTAC +
Preference number: 4 (lower is better)
Translates to: QRGHCLGALWSPGHPHIIHPHII*EKGRDY
Trigger: GTAGTCCCTTCCCTTCTCCCAAATGATGTGTGGATG...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp AGCCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAAGCTTTGTGGAGCCCTaGGCATCCACACATCATTTG +
Preference number: 4 (lower is better)
Translates to: SPGSSWASPSRMGWLKMGSFVEP*ASTHHL
Trigger: CAAATGATGTGTGGATGCCCAGGGCTCCACAAAGCT...TCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTTTGGTGTGTAGGCCTTaGTGTAGAAACTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSLVCRP*CRNCRL
Trigger: CAGCCTACAGTTTCTACATCAAGGCCTACACACCAA...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCAGAGCCAGCGAGCCTTaGGGTAGACATTTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLRASEP*GRHFLS
Trigger: TGAAAGAAAATGTCTACCTCAAGGCTCGCTGGCTCT...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp AGACAAGACGGGGACAGGCGGTGTGCTGGGAGGTGGCTCGTTTGGACAATTTATCTGTCAAGGCTGCCTTaGGTTTTGACAACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: RQDGDRRCAGRWLVWTIYLSRLP*VLTTQE
Trigger: CTCTTGGGTTGTCAAAACCCAAGGCAGCCTTGACAG...ATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCTTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATGGCTCCAGGACACAATaGGGCGCGGGTTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHGSRTQ*GAGCPW
Trigger: CCACGGGCAACCCGCGCCCCATTGTGTCCTGGAGCC...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATTGTGGAGGGGACAGCTaGTTTTCCACATCTTTACAC +
Preference number: 4 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHCGGDS*FSTSLH
Trigger: GTGTAAAGATGTGGAAAACCAGCTGTCCCCTCCACA...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCGGGAGGTGGCTCGTTTaGACAATTTATACTTCAAGG +
Preference number: 4 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLGRWLV*TIYTSR
Trigger: CCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCC...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATGTGTCCCTAGAGGATTaGGGGTCAGGGATATTTATG +
Preference number: 4 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHVSLED*GSGIFM
Trigger: CATAAATATCCCTGACCCCCAATCCTCTAGGGACAC...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATATTGTCCGTGTCAATTaGGACTCTGTTCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHIVRVN*DSVLLP
Trigger: TGGGAGAAGAACAGAGTCCCAATTGACACGGACAAT...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATCTGCAGGATCCTGTGTaGGTCTGGGGTCCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHLQDPV*VWGPAA
Trigger: GGCAGCCGGACCCCAGACCCACACAGGATCCTGCAG...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATGCCGCACCCCTGAAGTaGCAGCACGGAGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHAAPLK*QHGELG
Trigger: ACCCAGCTCTCCGTGCTGCCACTTCAGGGGTGCGGC...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR CAA 72 bp GACAGTGTCAGGGCCCAGCTACAGCAGGGTCATCTTTaGGAGTCTAATTCACCTTCCTCTATCTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: DSVRAQLQQGHL*ESNSPSSISLL
Trigger: GAGGAGAGAGATAGAGGAAGGTGAATTAGACTCCAAAAGATGACCCTGCTGTAGCTGGGCCCTGACACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATGGTGCACTGTCAGGGTaGGGTTCTCAGGCCCCACGA +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHGALSG*GSQAPR
Trigger: TCGTGGGGCCTGAGAACCTCACCCTGACAGTGCACC...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATGGCTACTGTTCCGAGTaGGCTGGCTGGGTAACCCGG +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHGYCSE*AGWVTR
Trigger: CCGGGTTACCCAGCCAGCTCACTCGGAACAGTAGCC...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATTCCGGCCATGGCTGCTaGCAGTGGATGCTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHSGHGC*QWMLPC
Trigger: ACAGGGGAGCATCCACTGTCAGCAGCCATGGCCGGA...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATTTCTTGAGCCTGACGTaGCCTCCTGGCCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHFLSLT*PPGPST
Trigger: GGTGCTGGGGCCAGGAGGCCACGTCAGGCTCAAGAA...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTGACCGATTCCAGAAATaGTCAGTGTGCTGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: YFCRPQEFPLVAQPLASPDRFQK*SVCCCY
Trigger: ATAACAACAGCACACTGACCATTTCTGGAATCGGTC...AGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR CAA 72 bp AGACGGGGACAGGCGGTGTGCTGGGAGGTGGCTCGTTaGGACAATTTATACTTCAAGGAACAAATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RRGQAVCWEVAR*DNLYFKEQISS
Trigger: AGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATGGTCAGCAGCCTTCCTaGTGTGCAGGACGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHGQQPS*CAGRSR
Trigger: TCGGCTACGTCCTGCACATCAGGAAGGCTGCTGACC...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATTTGCTGACTGCCTCCTaGTACTCCAGCTCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHLLTAS*YSSSGG
Trigger: CCCACCGGAGCTGGAGTATCAGGAGGCAGTCAGCAA...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATCGAAGTCCTGTGATCTaGAGGACCCCCTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHRSPVI*RTPLGS
Trigger: GCTGCCCAAGGGGGTCCTGCAGATCACAGGACTTCG...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATAGCACCGCGGTCTGGTaGACTGTCAGGGTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHSTAVW*TVRVRF
Trigger: GAACCTCACCCTGACAGTGCACCAGACCGCGGTGCT...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATTTCTCCTCACCCGGGTaGCAGGTCTGTTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHFSSPG*QVCWLH
Trigger: GTGCAGCCAACAGACCTGGCACCCGGGTGAGGAGAA...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR GCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATGGAAGACACAGAGACTaGCCGCACATTGCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHGRHRD*PHIAGR
Trigger: CCTCCCCGCAATGTGCGGGCAGTCTCTGTGTCTTCC...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATTCAAGCACCGCGGTCTaGTGCACTGTCAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHSSTAV*CTVRVR
Trigger: CCTCACCCTGACAGTGCACCAGACCGCGGTGCTTGA...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATAGGACCCTGCCCCTTTaGCCGAACAGGAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHRTLPL*PNRRKR
Trigger: CCTCTTCCTCCTGTTCGGCCAAAGGGGCAGGGTCCT...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATCACCCATCCCACACATaGTACATTCCAGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHHPSHT*YIPGAG
Trigger: CCCGGCCCCTGGAATGTACCATGTGTGGGATGGGTG...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATCTTCCGGCAGTCACATaGTGGGCTCAAGGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHLPAVT*WAQGCP
Trigger: AGGACAGCCTTGAGCCCACCATGTGACTGCCGGAAG...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATAAGAGTTCCCCTTGGTaGCCCAACCTCTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHKSSPW*PNLWPL
Trigger: GAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTT...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATCATTTTTCAGCCACGTaGCATGAGGCGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHHFSAT*HEAVAH
Trigger: GTGAGCCACCGCCTCATGTCACGTGGCTGAAAAATG...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATACACACGCACCTCAGTaGAAGACACAGAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHTHAPQ*KTQRLP
Trigger: GGGCAGTCTCTGTGTCTTCCACTGAGGTGCGTGTGT...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATGAAAGGTGCTCTTGCTaGCTGCCTCCTGATACTCCA +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHERCSC*LPPDTP
Trigger: TGGAGTATCAGGAGGCAGTCAGCAAGAGCACCTTTC...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR TCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATGATACTGGCGATGTTTaGGGCCACACAGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHDTGDV*GHTVED
Trigger: ATCTTCCACTGTGTGGCCTCAAACATCGCCAGTATC...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATGGAGGTCTTGCTTGCTaGGCGGTAAAACAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHGGLAC*AVKQLE
Trigger: TTCAAGCTGTTTTACCGCCCAGCAAGCAAGACCTCC...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CCA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATACACAAAGCGGACTGTaGCATTGCCATCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: WEVARLDNLYFKEQISSHTQSGL*HCHLHA
Trigger: AGCATGGAGATGGCAATGCCACAGTCCGCTTTGTGT...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327987.9
3UTR CAA 72 bp TTAACTAAAGTTCAGGGTGGAGGTGTCCCTAGAGGATaGGGGGTCAGGGATATTTATGGTCTCATTCTTAAG +
Preference number: 4 (lower is better)
Translates to: LTKVQGGGVPRG*GVRDIYGLILK
Trigger: CTTAAGAATGAGACCATAAATATCCCTGACCCCCAATCCTCTAGGGACACCTCCACCCTGAACTTTAGTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS CCA 90 bp AGCCTGGCCTTCACTGAGGAGGCCAGGGCCTCCATCTGGGGGTGGTaGGGCAGCCGCCAGGCCGGCGCAGGGAGCCGTGGCCTCTGTGGT +
Preference number: 5 (lower is better)
Translates to: SLAFTEEARASIWGW*GSRQAGAGSRGLCG
Trigger: ACCACAGAGGCCACGGCTCCCTGCGCCGGCCTGGCGGCTGCCCCACCACCCCCAGATGGAGGCCCTGGCCTCCTCAGTGAAGGCCAGGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS CCA 90 bp GGAAGCCTGGCCTTCACTGAGGAGGCCAGGGCCTCCATCTGGGGGTaGTGGGGCAGCCGCCAGGCCGGCGCAGGGAGCCGTGGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: GSLAFTEEARASIWG*WGSRQAGAGSRGLC
Trigger: ACAGAGGCCACGGCTCCCTGCGCCGGCCTGGCGGCTGCCCCACCACCCCCAGATGGAGGCCCTGGCCTCCTCAGTGAAGGCCAGGCTTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS GCA 90 bp CCGCCCTCGTGCTGGGCCAGCCGGGGCCAAGGCTCCCACAGCAGCTaGAAGGAGGAGCTGCCCAGGACTCGCACTGACAGTGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PPSCWASRGQGSHSS*KEELPRTRTDSGGG
Trigger: CCCACCCCCACTGTCAGTGCGAGTCCTGGGCAGCTCCTCCTTGCAGCTGCTGTGGGAGCCTTGGCCCCGGCTGGCCCAGCACGAGGGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327987.9
ENST00000558354.5
CDS GCA 90 bp GGGCGCGGGTTGCCCGTGGCGACACACTCAAGCACCGCGGTCTGGTaGACTGTCAGGGTGAGGTTCTCAGGCCCCACGAGGATGGCTGGC +
Preference number: 5 (lower is better)
Translates to: GRGLPVATHSSTAVW*TVRVRFSGPTRMAG
Trigger: GCCAGCCATCCTCGTGGGGCCTGAGAACCTCACCCTGACAGTGCACCAGACCGCGGTGCTTGAGTGTGTCGCCACGGGCAACCCGCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327987.9
ENST00000558354.5
CDS GCA 90 bp GGGCTTGCACCACCAGCCGGCCCTGTGCCGTTCTCCTCACCCGGGTaGCAGGTCTGTTGGCTGCACAGACGTAGACGCCAGAGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: GLAPPAGPVPFSSPG*QVCWLHRRRRQSAG
Trigger: TCCAGCACTCTGGCGTCTACGTCTGTGCAGCCAACAGACCTGGCACCCGGGTGAGGAGAACGGCACAGGGCCGGCTGGTGGTGCAAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559231.1
CDS CCA 90 bp ATGGGGCGCGGGTTGCCCGTGGCGACACACTCAAGCACCGCGGTCTaGTGCACTGTCAGGGTGAGGTTCTCAGGCCCCACGAGGATGGCT +
Preference number: 5 (lower is better)
Translates to: MGRGLPVATHSSTAV*CTVRVRFSGPTRMA
Trigger: AGCCATCCTCGTGGGGCCTGAGAACCTCACCCTGACAGTGCACCAGACCGCGGTGCTTGAGTGTGTCGCCACGGGCAACCCGCGCCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327987.9
ENST00000558354.5
CDS CCA 90 bp CACCCTCTGGAGCCTGCCAGACACTGGCTACTGTTCCGAGTGAGCTaGCTGGGTAACCCGGGCCGCTGCAGGCCTGGAAGCCTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: HPLEPARHWLLFRVS*LGNPGRCRPGSLAF
Trigger: GAAGGCCAGGCTTCCAGGCCTGCAGCGGCCCGGGTTACCCAGCCAGCTCACTCGGAACAGTAGCCAGTGTCTGGCAGGCTCCAGAGGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS CCA 90 bp GGATTTGGCACTGGAAGCGGGCCACACCACCCTCCTCACCCACGGTaGCCTGGGGATGCACGTGGAAGTCCGACATGGCTCGCTCGCACC +
Preference number: 5 (lower is better)
Translates to: GFGTGSGPHHPPHPR*PGDARGSPTWLART
Trigger: GGTGCGAGCGAGCCATGTCGGACTTCCACGTGCATCCCCAGGCCACCGTGGGTGAGGAGGGTGGTGTGGCCCGCTTCCAGTGCCAAATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559058.1
CDS CCA 90 bp CCTTGGTGTTGGCCAGCGGCTCACTCCAGGACACACGCACCTCAGTaGAAGACACAGAGACTGCCCGCACATTGCGGGGAGGCCCGGGGA +
Preference number: 5 (lower is better)
Translates to: PWCWPAAHSRTHAPQ*KTQRLPAHCGEARG
Trigger: TCCCCGGGCCTCCCCGCAATGTGCGGGCAGTCTCTGTGTCTTCCACTGAGGTGCGTGTGTCCTGGAGTGAGCCGCTGGCCAACACCAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559231.1
CDS GCA 90 bp AGGCTGCCCGGGGACGGCAACATCATCACTTGGCTCCACAGCAAATaGCAGTTCAGCAGAGTGGCCAAGACCCTCGCTCGGCGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: RLPGDGNIITWLHSK*QFSRVAKTLARRGQ
Trigger: CTGCCCGCGCCGAGCGAGGGTCTTGGCCACTCTGCTGAACTGGCATTTGCTGTGGAGCCAAGTGATGATGTTGCCGTCCCCGGGCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS CCA 90 bp GAGGCCCGGGGAGCCCCTCAGCCCACAGTACGGTCAGCCTGGCACTaGCCTGTGATGAGCCCGCACTGTTCTCGGCCACACACTGATAAA +
Preference number: 5 (lower is better)
Translates to: EARGAPQPTVRSAWH*PVMSPHCSRPHTDK
Trigger: TTTATCAGTGTGTGGCCGAGAACAGTGCGGGCTCATCACAGGCCAGTGCCAGGCTGACCGTACTGTGGGCTGAGGGGCTCCCCGGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559231.1
CDS CCA 90 bp GGATTTGGCACTGGAAGCGGGCCACACCACCCTCCTCACCCACGGTaGCCTGGGGATGCACGTGGAAGTCCGACATGGCTTAGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: GFGTGSGPHHPPHPR*PGDARGSPTWLSAQ
Trigger: CTGGGCACTAAGCCATGTCGGACTTCCACGTGCATCCCCAGGCCACCGTGGGTGAGGAGGGTGGTGTGGCCCGCTTCCAGTGCCAAATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558354.5
CDS CCA 90 bp GGATTTGGCACTGGAAGCGGGCCACACCACCCTCCTCACCCACGGTaGCCTGGGGATGCACGTGGAAGTCCGACATGGTTGCAGCTTGGA +
Preference number: 5 (lower is better)
Translates to: GFGTGSGPHHPPHPR*PGDARGSPTWLQLG
Trigger: TCCAAGCTGCAACCATGTCGGACTTCCACGTGCATCCCCAGGCCACCGTGGGTGAGGAGGGTGGTGTGGCCCGCTTCCAGTGCCAAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CAA 90 bp TATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTGAGACTGCCCGCACATaGCGGGGAGGCCCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: YFCRPQEFPLVAQPLASPETART*RGGPGS
Trigger: GCTCCCCGGGCCTCCCCGCAATGTGCGGGCAGTCTC...AGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS TCA 90 bp TGGCCTCCTGGCCCCAGCACCTGTCCATTTTTCAGCCACGTGACATaGGGCGGTGGCTCACCCTGGGCTTGGCAGGTGAACATGGCTGTG +
Preference number: 5 (lower is better)
Translates to: WPPGPSTCPFFSHVT*GGGSPWAWQVNMAV
Trigger: CACAGCCATGTTCACCTGCCAAGCCCAGGGTGAGCCACCGCCTCATGTCACGTGGCTGAAAAATGGACAGGTGCTGGGGCCAGGAGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559231.1
CDS CCA 90 bp TGGCCCCAGCACCTGTCCATTTTTCAGCCACGTGACATGAGGCGGTaGCTCACCCTGGGCTTGGCAGGTGAACATGGCTGTGGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: WPQHLSIFQPRDMRR*LTLGLAGEHGCGPS
Trigger: GCTGGGACCACAGCCATGTTCACCTGCCAAGCCCAGGGTGAGCCACCGCCTCATGTCACGTGGCTGAAAAATGGACAGGTGCTGGGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559231.1
CDS-3UTR CAA 90 bp AGACAAGACGGGGACAGGCGGTGTGCTGGGAGGTGGCTCGTTTGGACAATTTATCAGGGGGAGCGCCGCTaGCGCCATCTTGCACCCACC +
Preference number: 5 (lower is better)
Translates to: RQDGDRRCAGRWLVWTIYQGERR*RHLAPT
Trigger: GGTGGGTGCAAGATGGCGCAAGCGGCGCTCCCCCTG...ATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCTTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CAA 90 bp GCCCCAGCCGCACCCTTCCCAAGGGAGAGGGAGGCTCCCGAGAGAAGCTGCTTTAAGCGGACTGTGGCATaGCCATCTCCATGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: APAAPFPREREAPERSCFKRTVA*PSPCWL
Trigger: CAACCAGCATGGAGATGGCAATGCCACAGTCCGCTT...AAAGCAGCTTCTCTCGGGAGCCTCCCTCTCCCTTGGGAAGGGTGCGGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS TCA 90 bp CACAGTGAGCCTGGCCCCGTGGCTGATCCGGATACTGGCGATGTTTaGGGCCACACAGTGGAAGATGCCACCGTCCTCAGCTCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: HSEPGPVADPDTGDV*GHTVEDATVLSSKS
Trigger: GGACTTCGAGCTGAGGACGGTGGCATCTTCCACTGTGTGGCCTCAAACATCGCCAGTATCCGGATCAGCCACGGGGCCAGGCTCACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559058.1
CDS GCA 90 bp GGGCTCCAGGTCGCTGACCAGGTGCTGAAAGGTGCTCTTGCTGACTaGCTCCTGATACTCCAGCTCCGGTGGGTCAGCAGCCTTCCTGAT +
Preference number: 5 (lower is better)
Translates to: GLQVADQVLKGALAD*LLILQLRWVSSLPD
Trigger: ATCAGGAAGGCTGCTGACCCACCGGAGCTGGAGTATCAGGAGGCAGTCAGCAAGAGCACCTTTCAGCACCTGGTCAGCGACCTGGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559231.1
CDS-3UTR CAA 90 bp AGACAAGACGGGGACAGGCGGTGTGCTGGGAGGTGGCTCGTTTGGACAATTTATGCCGCTTGCGCCATCTaGCACCCACCCGGGCGATCT +
Preference number: 5 (lower is better)
Translates to: RQDGDRRCAGRWLVWTIYAACAI*HPPGRS
Trigger: AGATCGCCCGGGTGGGTGCAAGATGGCGCAAGCGGC...ATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCTTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CAA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTACAATGGGGCGCGGGTaGCCCGTGGCGACACACTCA +
Preference number: 5 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSTMGRG*PVATHS
Trigger: TGAGTGTGTCGCCACGGGCAACCCGCGCCCCATTGT...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS CCA 90 bp GGGACTCTGTTCTTCTCCCAAGTGATCAGGGGTTTGGGAAGCCCATaGATTTGGCACTGGAAGCGGGCCACACCACCCTCCTCACCCACG +
Preference number: 5 (lower is better)
Translates to: GTLFFSQVIRGLGSP*IWHWKRATPPSSPT
Trigger: CGTGGGTGAGGAGGGTGGTGTGGCCCGCTTCCAGTGCCAAATCCATGGGCTTCCCAAACCCCTGATCACTTGGGAGAAGAACAGAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559058.1
CDS CCA 90 bp GCCCCGTGGCTGATCCGGATACTGGCGATGTTTGAGGCCACACAGTaGAAGATGCCACCGTCCTCAGCTCGAAGTCCTGTGATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: APWLIRILAMFEATQ*KMPPSSARSPVICR
Trigger: CCTGCAGATCACAGGACTTCGAGCTGAGGACGGTGGCATCTTCCACTGTGTGGCCTCAAACATCGCCAGTATCCGGATCAGCCACGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559058.1
CDS-3UTR CAA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTGAGGACCCTGCCCCTTaGGCCGAACAGGAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSEDPAP*AEQEEE
Trigger: CTCTTCCTCCTGTTCGGCCAAAGGGGCAGGGTCCTC...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CAA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCAGAGGGGGCACTGCCTaGGAGCTTTGTGGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLRGGTA*ELCGAL
Trigger: CAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCT...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS CCA 90 bp GCAGTCCAGCACTATAGGCTGCCCGGGGACGGCAACATCATCACTTaGCTCCACAGCAAATGCCAGTTCAGCAGAGTGGCCAAGACCCTC +
Preference number: 5 (lower is better)
Translates to: AVQHYRLPGDGNIIT*LHSKCQFSRVAKTL
Trigger: GAGGGTCTTGGCCACTCTGCTGAACTGGCATTTGCTGTGGAGCCAAGTGATGATGTTGCCGTCCCCGGGCAGCCTATAGTGCTGGACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CAA 90 bp AGCCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGACGACATGGTTGCAGCTaGGATGCGAGCCTTCCGGCT +
Preference number: 5 (lower is better)
Translates to: SPGSSWASPSRMGWLKMGRHGCS*DASLPA
Trigger: AGCCGGAAGGCTCGCATCCAAGCTGCAACCATGTCG...TCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS TCA 90 bp GCACGTGGAAGTCCGACATGGCTCGCTCGCACCACCGCGGGTGAATaGGAGAATCCGGCATTGTGCGCGGCGAATGGAGAAAATAAGACA +
Preference number: 5 (lower is better)
Translates to: ARGSPTWLARTTAGE*ENPALCAANGENKT
Trigger: TGTCTTATTTTCTCCATTCGCCGCGCACAATGCCGGATTCTCTCATTCACCCGCGGTGGTGCGAGCGAGCCATGTCGGACTTCCACGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559058.1
CDS CCA 90 bp AACAGGAGGAAGAGGACACAGAAGATGATGCAAGTGACCCCGATGTaGATGCCGATGACGATGCCTGTGGTGGACGTCTGGTTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: NRRKRTQKMMQVTPM*MPMTMPVVDVWLAA
Trigger: GGCCGCCAACCAGACGTCCACCACAGGCATCGTCATCGGCATCCACATCGGGGTCACTTGCATCATCTTCTGTGTCCTCTTCCTCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327987.9
ENST00000558354.5
CDS-3UTR CAA 90 bp AGCCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGGAAGTCCGACATGGTaGCAGCTTGGATGCGAGCCT +
Preference number: 5 (lower is better)
Translates to: SPGSSWASPSRMGWLKMGGSPTW*QLGCEP
Trigger: AGGCTCGCATCCAAGCTGCAACCATGTCGGACTTCC...TCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CAA 90 bp GCCCCAGCCGCACCCTTCCCAAGGGAGAGGGAGGCTCCCGAGAGAAGCTGCTTTAATGTGTACCTCTCATaGTCCGTGTCAATTGGGACT +
Preference number: 5 (lower is better)
Translates to: APAAPFPREREAPERSCFNVYLS*SVSIGT
Trigger: AGTCCCAATTGACACGGACAATGAGAGGTACACATT...AAAGCAGCTTCTCTCGGGAGCCTCCCTCTCCCTTGGGAAGGGTGCGGCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CAA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCATCTGCAGGACCCCCTaGGGCAGCAATGTGTACCTC +
Preference number: 5 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLICRTP*GSNVYL
Trigger: GAGGTACACATTGCTGCCCAAGGGGGTCCTGCAGAT...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CAA 90 bp TATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCCGAGAGAAGCTGCTTaGGGAACAGAGGGGGCACTG +
Preference number: 5 (lower is better)
Translates to: YFCRPQEFPLVAQPLASPPREAA*GTEGAL
Trigger: CAGTGCCCCCTCTGTTCCCAAAGCAGCTTCTCTCGG...AGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS TCA 90 bp AGGCCACACAGTGGAAGATGCCACCGTCCTCAGCTCGAAGTCCTGTaGTCTGCAGGACCCCCTTGGGCAGCAATGTGTACCTCTCATTGT +
Preference number: 5 (lower is better)
Translates to: RPHSGRCHRPQLEVL*SAGPPWAAMCTSHC
Trigger: ACAATGAGAGGTACACATTGCTGCCCAAGGGGGTCCTGCAGATCACAGGACTTCGAGCTGAGGACGGTGGCATCTTCCACTGTGTGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559058.1
CDS GCA 90 bp ACACAGTGGAAGATGCCACCGTCCTCAGCTCGAAGTCCTGTGATCTaGAGGACCCCCTTGGGCAGCAATGTGTACCTCTCATTGTCCGTG +
Preference number: 5 (lower is better)
Translates to: TQWKMPPSSARSPVI*RTPLGSNVYLSLSV
Trigger: CACGGACAATGAGAGGTACACATTGCTGCCCAAGGGGGTCCTGCAGATCACAGGACTTCGAGCTGAGGACGGTGGCATCTTCCACTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559058.1
CDS CCA 90 bp GATCATCAAGGACCCATTGGCCAGCAAGGTGGAGTGGGTACTCTCTaGCAGCTCTACCCCATTCTTCCTCCAGGTGATTCGCACTGGAGG +
Preference number: 5 (lower is better)
Translates to: DHQGPIGQQGGVGTL*QLYPILPPGDSHWR
Trigger: CCTCCAGTGCGAATCACCTGGAGGAAGAATGGGGTAGAGCTGCCAGAGAGTACCCACTCCACCTTGCTGGCCAATGGGTCCTTGATGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CAA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCATCATCAAGGACCCATaGGCCAGCAAGGTGGAGTGG +
Preference number: 5 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLIIKDP*ASKVEW
Trigger: CCACTCCACCTTGCTGGCCAATGGGTCCTTGATGAT...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS CCA 90 bp AATGGTCAGTGTGCTGTTGTTATTCTTGAGCCTGACGTGGCCTCCTaGCCCCAGCACCTGTCCATTTTTCAGCCACGTGACATGAGGCGG +
Preference number: 5 (lower is better)
Translates to: NGQCAVVILEPDVAS*PQHLSIFQPRDMRR
Trigger: CCGCCTCATGTCACGTGGCTGAAAAATGGACAGGTGCTGGGGCCAGGAGGCCACGTCAGGCTCAAGAATAACAACAGCACACTGACCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559231.1
CDS-3UTR CAA 90 bp ATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCCCTGTCAAGGCTGCCTaGGGTTTTGACAACCCAAGA +
Preference number: 5 (lower is better)
Translates to: ISVGHKSSPWWPNLWPLLPVKAA*GFDNPR
Trigger: TCTTGGGTTGTCAAAACCCAAGGCAGCCTTGACAGG...GAGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CAA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATCGGCAACATCATCACTaGGCTCCACAGCAAATGCCA +
Preference number: 5 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHRQHHH*APQQMP
Trigger: TGGCATTTGCTGTGGAGCCAAGTGATGATGTTGCCG...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CAA 90 bp AGACAAGACGGGGACAGGCGGTGTGCTGGGAGGTGGCTCGTTTGGACAATTTATCAAGTGATCAGGGGTTaGGGAAGCCCATGGATTTGG +
Preference number: 5 (lower is better)
Translates to: RQDGDRRCAGRWLVWTIYQVIRG*GSPWIW
Trigger: CCAAATCCATGGGCTTCCCAAACCCCTGATCACTTG...ATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CAA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTCATTGTCCGTGTCAATaGGGACTCTGTTCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSHCPCQ*GLCSSP
Trigger: GGGAGAAGAACAGAGTCCCAATTGACACGGACAATG...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CAA 90 bp AGACAAGACGGGGACAGGCGGTGTGCTGGGAGGTGGCTCGTTTGGACAATTTATGGATACTGGCGATGTTaGAGGCCACACAGTGGAAGA +
Preference number: 5 (lower is better)
Translates to: RQDGDRRCAGRWLVWTIYGYWRC*RPHSGR
Trigger: TCTTCCACTGTGTGGCCTCAAACATCGCCAGTATCC...ATAAATTGTCCAAACGAGCCACCTCCCAGCACACCGCCTGTCCCCGTCTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CAA 90 bp TTGACAACCCAAGAGGCAGTCAGGATAGAAATGCTGGGGAGCCCCCAGGACCATGTGCTGTTGTTATTCTaGAGCCTGACGTGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: LTTQEAVRIEMLGSPQDHVLLLF*SLTWPP
Trigger: AGGAGGCCACGTCAGGCTCAAGAATAACAACAGCAC...ATGGTCCTGGGGGCTCCCCAGCATTTCTATCCTGACTGCCTCTTGGGTTGTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CAA 90 bp CAGAGGGGGCACTGCCTTGGAGCTTTGTGGAGCCCTGGGCATCCACACATCATTATGGTCAGTGTGCTGTaGTTATTCTTGAGCCTGACG +
Preference number: 5 (lower is better)
Translates to: QRGHCLGALWSPGHPHIIMVSVL*LFLSLT
Trigger: CGTCAGGCTCAAGAATAACAACAGCACACTGACCAT...AATGATGTGTGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTGCCCCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS TCA 90 bp ACCTCTCATTGTCCGTGTCAATTGGGACTCTGTTCTTCTCCCAAGTaGTCAGGGGTTTGGGAAGCCCATGGATTTGGCACTGGAAGCGGG +
Preference number: 5 (lower is better)
Translates to: TSHCPCQLGLCSSPK*SGVWEAHGFGTGSG
Trigger: CCCGCTTCCAGTGCCAAATCCATGGGCTTCCCAAACCCCTGATCACTTGGGAGAAGAACAGAGTCCCAATTGACACGGACAATGAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559058.1
CDS CCA 90 bp ATTCCAGAAATGGTCAGTGTGCTGTTGTTATTCTTGAGCCTGACGTaGCCTCCTGGCCCCAGCACCTGTCCATTTTTCAGCCACGTGACA +
Preference number: 5 (lower is better)
Translates to: IPEMVSVLLLFLSLT*PPGPSTCPFFSHVT
Trigger: TGTCACGTGGCTGAAAAATGGACAGGTGCTGGGGCCAGGAGGCCACGTCAGGCTCAAGAATAACAACAGCACACTGACCATTTCTGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559231.1
CDS-3UTR CAA 90 bp TATTTCTGTAGGCCACAAGAGTTCCCCTTGGTGGCCCAACCTCTGGCCTCTCCTCAGCAGGGTCATCTTTaGGAGTCTAATTCACCTTCC +
Preference number: 5 (lower is better)
Translates to: YFCRPQEFPLVAQPLASPQQGHL*ESNSPS
Trigger: GGAAGGTGAATTAGACTCCAAAAGATGACCCTGCTG...AGGAGAGGCCAGAGGTTGGGCCACCAAGGGGAACTCTTGTGGCCTACAGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CAA 90 bp CCCAGGTTCCTCATGGGCATCCCCATCAAGGATGGGCTGGCTCAAAATGGGAGTTGGGAGGTGGCTCGTTaGGACAATTTATACTTCAAG +
Preference number: 5 (lower is better)
Translates to: PRFLMGIPIKDGLAQNGSWEVAR*DNLYFK
Trigger: CTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA...ACTCCCATTTTGAGCCAGCCCATCCTTGATGGGGATGCCCATGAGGAACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS GCA 90 bp CTGCCTCAAACTGATTCATCACTCACCAGCCGTTCAGAGCAACTGTaGAAATGCCCTCAGAGCCAGGAAGAAACTTGTCAGCGATCAGAC +
Preference number: 5 (lower is better)
Translates to: LPQTDSSLTSRSEQL*KCPQSQEETCQRSD
Trigger: GTCTGATCGCTGACAAGTTTCTTCCTGGCTCTGAGGGCATTTGCACAGTTGCTCTGAACGGCTGGTGAGTGATGAATCAGTTTGAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559947.1
CDS-3UTR CAA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATAAACTCAGCTGGGGCTaGCACCACCAGCCGGCCCTG +
Preference number: 5 (lower is better)
Translates to: WEVARLDNLYFKEQISSHKLSWG*HHQPAL
Trigger: CAGGGCCGGCTGGTGGTGCAAGCCCCAGCTGAGTTT...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS GCA 90 bp CAAACTGATTCATCACTCACCAGCCGTTCAGAGCAACTGTGCAAATaGCCTCAGAGCCAGGAAGAAACTTGTCAGCGATCAGACAGGAAA +
Preference number: 5 (lower is better)
Translates to: QTDSSLTSRSEQLCK*PQSQEETCQRSDRK
Trigger: TTTCCTGTCTGATCGCTGACAAGTTTCTTCCTGGCTCTGAGGGCATTTGCACAGTTGCTCTGAACGGCTGGTGAGTGATGAATCAGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559947.1
CDS-3UTR CAA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATCACTGCCTTGGAGCTTaGTGGAGCCCTGGGCATCCA +
Preference number: 5 (lower is better)
Translates to: WEVARLDNLYFKEQISSHHCLGA*WSPGHP
Trigger: TGGATGCCCAGGGCTCCACAAAGCTCCAAGGCAGTG...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS-3UTR CAA 90 bp TGGGAGGTGGCTCGTTTGGACAATTTATACTTCAAGGAACAAATTTCCTCTCATGGTGTCCCTAGAGGATaGGGGGTCAGGGATATTTAT +
Preference number: 5 (lower is better)
Translates to: WEVARLDNLYFKEQISSHGVPRG*GVRDIY
Trigger: ATAAATATCCCTGACCCCCAATCCTCTAGGGACACC...ATGAGAGGAAATTTGTTCCTTGAAGTATAAATTGTCCAAACGAGCCACCTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS CCA 72 bp GTGGTGGGGCAGCCGCCAGGCCGGCGCAGGGAGCCGTaGCCTCTGTGGTCTTCGCCTCCGTCGTCTTCCCCT +
Preference number: 6 (lower is better)
Translates to: VVGQPPGRRREP*PLWSSPPSSSP
Trigger: AGGGGAAGACGACGGAGGCGAAGACCACAGAGGCCACGGCTCCCTGCGCCGGCCTGGCGGCTGCCCCACCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS CCA 72 bp CAGCCGCCAGGCCGGCGCAGGGAGCCGTGGCCTCTGTaGTCTTCGCCTCCGTCGTCTTCCCCTCCATCAGGC +
Preference number: 6 (lower is better)
Translates to: QPPGRRREPWPL*SSPPSSSPPSG
Trigger: GCCTGATGGAGGGGAAGACGACGGAGGCGAAGACCACAGAGGCCACGGCTCCCTGCGCCGGCCTGGCGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS GCA 72 bp CACGGAGAGCTGGGTCTCCTCACACGGAGCGGGGGCTaGAGGATCCTGTGTGGGTCTGGGGTCCGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: HGELGLLTRSGG*RILCGSGVRLP
Trigger: GGGCAGCCGGACCCCAGACCCACACAGGATCCTGCAGCCCCCGCTCCGTGTGAGGAGACCCAGCTCTCCGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS CCA 72 bp GCCCGGGGAGCCCCTCAGCCCACAGTACGGTCAGCCTaGCACTGGCCTGTGATGAGCCCGCACTGTTCTCGG +
Preference number: 6 (lower is better)
Translates to: ARGAPQPTVRSA*HWPVMSPHCSR
Trigger: CCGAGAACAGTGCGGGCTCATCACAGGCCAGTGCCAGGCTGACCGTACTGTGGGCTGAGGGGCTCCCCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559231.1
CDS GCA 72 bp CCACCAGCCGGCCCTGTGCCGTTCTCCTCACCCGGGTaGCAGGTCTGTTGGCTGCACAGACGTAGACGCCAG +
Preference number: 6 (lower is better)
Translates to: PPAGPVPFSSPG*QVCWLHRRRRQ
Trigger: CTGGCGTCTACGTCTGTGCAGCCAACAGACCTGGCACCCGGGTGAGGAGAACGGCACAGGGCCGGCTGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559231.1
CDS GCA 72 bp TGCTGGGCCAGCCGGGGCCAAGGCTCCCACAGCAGCTaGAAGGAGGAGCTGCCCAGGACTCGCACTGACAGT +
Preference number: 6 (lower is better)
Translates to: CWASRGQGSHSS*KEELPRTRTDS
Trigger: ACTGTCAGTGCGAGTCCTGGGCAGCTCCTCCTTGCAGCTGCTGTGGGAGCCTTGGCCCCGGCTGGCCCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327987.9
ENST00000558354.5
CDS CCA 72 bp GGAGCCCCTCAGCCCACAGTACGGTCAGCCTGGCACTaGCCTGTGATGAGCCCGCACTGTTCTCGGCCACAC +
Preference number: 6 (lower is better)
Translates to: GAPQPTVRSAWH*PVMSPHCSRPH
Trigger: GTGTGGCCGAGAACAGTGCGGGCTCATCACAGGCCAGTGCCAGGCTGACCGTACTGTGGGCTGAGGGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559231.1
CDS GCA 72 bp TTGCCCGTGGCGACACACTCAAGCACCGCGGTCTGGTaGACTGTCAGGGTGAGGTTCTCAGGCCCCACGAGG +
Preference number: 6 (lower is better)
Translates to: LPVATHSSTAVW*TVRVRFSGPTR
Trigger: CCTCGTGGGGCCTGAGAACCTCACCCTGACAGTGCACCAGACCGCGGTGCTTGAGTGTGTCGCCACGGGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327987.9
ENST00000558354.5
CDS CAA 72 bp CAGCCACGTGACATGAGGCGGTGGCTCACCCTGGGCTaGGCAGGTGAACATGGCTGTGGTCCCAGCTGGCCT +
Preference number: 6 (lower is better)
Translates to: QPRDMRRWLTLG*AGEHGCGPSWP
Trigger: AGGCCAGCTGGGACCACAGCCATGTTCACCTGCCAAGCCCAGGGTGAGCCACCGCCTCATGTCACGTGGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559231.1
CDS TCA 72 bp CTCCTGGCCCCAGCACCTGTCCATTTTTCAGCCACGTaGCATGAGGCGGTGGCTCACCCTGGGCTTGGCAGG +
Preference number: 6 (lower is better)
Translates to: LLAPAPVHFSAT*HEAVAHPGLGR
Trigger: CCTGCCAAGCCCAGGGTGAGCCACCGCCTCATGTCACGTGGCTGAAAAATGGACAGGTGCTGGGGCCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559231.1
CDS TCA 72 bp CCTGGCCCCGTGGCTGATCCGGATACTGGCGATGTTTaGGGCCACACAGTGGAAGATGCCACCGTCCTCAGC +
Preference number: 6 (lower is better)
Translates to: PGPVADPDTGDV*GHTVEDATVLS
Trigger: GCTGAGGACGGTGGCATCTTCCACTGTGTGGCCTCAAACATCGCCAGTATCCGGATCAGCCACGGGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559058.1
CDS TCA 72 bp TGGAAGTCCGACATGGCTCGCTCGCACCACCGCGGGTaGATGAGAGAATCCGGCATTGTGCGCGGCGAATGG +
Preference number: 6 (lower is better)
Translates to: WKSDMARSHHRG*MRESGIVRGEW
Trigger: CCATTCGCCGCGCACAATGCCGGATTCTCTCATTCACCCGCGGTGGTGCGAGCGAGCCATGTCGGACTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559058.1
CDS CCA 72 bp GTGATCAGGGGTTTGGGAAGCCCATGGATTTGGCACTaGAAGCGGGCCACACCACCCTCCTCACCCACGGTG +
Preference number: 6 (lower is better)
Translates to: VIRGLGSPWIWH*KRATPPSSPTV
Trigger: CACCGTGGGTGAGGAGGGTGGTGTGGCCCGCTTCCAGTGCCAAATCCATGGGCTTCCCAAACCCCTGATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559058.1
CDS CCA 72 bp CAGCAGGATGGGGCCGGTGAAGGAGGTCTTGCTTGCTaGGCGGTAAAACAGCTTGAAGCCGCCCTCGTGCTG +
Preference number: 6 (lower is better)
Translates to: QQDGAGEGGLAC*AVKQLEAALVL
Trigger: CAGCACGAGGGCGGCTTCAAGCTGTTTTACCGCCCAGCAAGCAAGACCTCCTTCACCGGCCCCATCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327987.9
ENST00000558354.5
CDS CCA 72 bp CAGACAGGAAAGAGGCGGCGTGCCACGGGAGCTAAGTaGGAGGGTGTGGGTTCAGGCTGCCCAGATGACAGT +
Preference number: 6 (lower is better)
Translates to: QTGKRRRATGAK*EGVGSGCPDDS
Trigger: ACTGTCATCTGGGCAGCCTGAACCCACACCCTCCCACTTAGCTCCCGTGGCACGCCGCCTCTTTCCTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559947.1
CDS TCA 72 bp AAGACAGCCATTGTCCTCGCACGCCAAACGAGGGTTTaGTGTCGCTGGGGCGAGCGAGGCACCATTTCCCGC +
Preference number: 6 (lower is better)
Translates to: KTAIVLARQTRV*CRWGERGTISR
Trigger: GCGGGAAATGGTGCCTCGCTCGCCCCAGCGACATCAAACCCTCGTTTGGCGTGCGAGGACAATGGCTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559058.1
CDS TCA 72 bp AGTCCGACATGGCTCGCTCGCACCACCGCGGGTGAATaGGAGAATCCGGCATTGTGCGCGGCGAATGGAGAA +
Preference number: 6 (lower is better)
Translates to: SPTWLARTTAGE*ENPALCAANGE
Trigger: TTCTCCATTCGCCGCGCACAATGCCGGATTCTCTCATTCACCCGCGGTGGTGCGAGCGAGCCATGTCGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559058.1
CDS GCA 72 bp GTCGCTGACCAGGTGCTGAAAGGTGCTCTTGCTGACTaGCTCCTGATACTCCAGCTCCGGTGGGTCAGCAGC +
Preference number: 6 (lower is better)
Translates to: VADQVLKGALAD*LLILQLRWVSS
Trigger: GCTGCTGACCCACCGGAGCTGGAGTATCAGGAGGCAGTCAGCAAGAGCACCTTTCAGCACCTGGTCAGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559231.1
CDS CCA 72 bp TCCCAAGTGATCAGGGGTTTGGGAAGCCCATGGATTTaGCACTGGAAGCGGGCCACACCACCCTCCTCACCC +
Preference number: 6 (lower is better)
Translates to: SQVIRGLGSPWI*HWKRATPPSSP
Trigger: GGGTGAGGAGGGTGGTGTGGCCCGCTTCCAGTGCCAAATCCATGGGCTTCCCAAACCCCTGATCACTTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559058.1
CDS TCA 72 bp AGTGGAAGATGCCACCGTCCTCAGCTCGAAGTCCTGTaGTCTGCAGGACCCCCTTGGGCAGCAATGTGTACC +
Preference number: 6 (lower is better)
Translates to: SGRCHRPQLEVL*SAGPPWAAMCT
Trigger: GGTACACATTGCTGCCCAAGGGGGTCCTGCAGATCACAGGACTTCGAGCTGAGGACGGTGGCATCTTCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559058.1
CDS TCA 72 bp CGACATGGCTTAGTGCCCAGCTGTGTGCCACCAACCTaGAAGGACTGCCGAGGTTTAGGCAATGGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: RHGLVPSCVPPT*KDCRGLGNGWE
Trigger: CTCCCAGCCATTGCCTAAACCTCGGCAGTCCTTTCAGGTTGGTGGCACACAGCTGGGCACTAAGCCATGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558354.5
CDS CCA 72 bp CACTATAGGCTGCCCGGGGACGGCAACATCATCACTTaGCTCCACAGCAAATGCCAGTTCAGCAGAGTGGCC +
Preference number: 6 (lower is better)
Translates to: HYRLPGDGNIIT*LHSKCQFSRVA
Trigger: GGCCACTCTGCTGAACTGGCATTTGCTGTGGAGCCAAGTGATGATGTTGCCGTCCCCGGGCAGCCTATAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327987.9
CDS CCA 72 bp GGACCCATTGGCCAGCAAGGTGGAGTGGGTACTCTCTaGCAGCTCTACCCCATTCTTCCTCCAGGTGATTCG +
Preference number: 6 (lower is better)
Translates to: GPIGQQGGVGTL*QLYPILPPGDS
Trigger: CGAATCACCTGGAGGAAGAATGGGGTAGAGCTGCCAGAGAGTACCCACTCCACCTTGCTGGCCAATGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327987.9
ENST00000559947.1
CDS CCA 72 bp TTCTTCTCCCAAGTGATCAGGGGTTTGGGAAGCCCATaGATTTGGCACTGGAAGCGGGCCACACCACCCTCC +
Preference number: 6 (lower is better)
Translates to: FFSQVIRGLGSP*IWHWKRATPPS
Trigger: GGAGGGTGGTGTGGCCCGCTTCCAGTGCCAAATCCATGGGCTTCCCAAACCCCTGATCACTTGGGAGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559058.1
CDS CCA 72 bp CACCTGTCCATTTTTCAGCCACGTGACATGAGGCGGTaGCTCACCCTGGGCTTGGCAGGTGAACATGGCTGT +
Preference number: 6 (lower is better)
Translates to: HLSIFQPRDMRR*LTLGLAGEHGC
Trigger: ACAGCCATGTTCACCTGCCAAGCCCAGGGTGAGCCACCGCCTCATGTCACGTGGCTGAAAAATGGACAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559231.1
CDS CAA 90 bp CCGTTCAGAGCAACTGTGCAAATGCCCTCAGAGCCAGGAAGAAACTaGTCAGCGATCAGACAGGAAAGAGGCGGCGTGCCACGGGAGCTA +
Preference number: 6 (lower is better)
Translates to: PFRATVQMPSEPGRN*SAIRQERGGVPREL
Trigger: TAGCTCCCGTGGCACGCCGCCTCTTTCCTGTCTGATCGCTGACAAGTTTCTTCCTGGCTCTGAGGGCATTTGCACAGTTGCTCTGAACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559947.1
CDS CAA 90 bp AGAATCCGGCATTGTGCGCGGCGAATGGAGAAAATAAGACAGCCATaGTCCTCGCACGCCAAACGAGGGTTTGATGTCGCTGGGGCGAGC +
Preference number: 6 (lower is better)
Translates to: RIRHCARRMEKIRQP*SSHAKRGFDVAGAS
Trigger: GCTCGCCCCAGCGACATCAAACCCTCGTTTGGCGTGCGAGGACAATGGCTGTCTTATTTTCTCCATTCGCCGCGCACAATGCCGGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559058.1
CDS GCA 72 bp AAGATGCCACCGTCCTCAGCTCGAAGTCCTGTGATCTaGAGGACCCCCTTGGGCAGCAATGTGTACCTCTCA +
Preference number: 6 (lower is better)
Translates to: KMPPSSARSPVI*RTPLGSNVYLS
Trigger: TGAGAGGTACACATTGCTGCCCAAGGGGGTCCTGCAGATCACAGGACTTCGAGCTGAGGACGGTGGCATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559058.1
CDS CCA 72 bp CTGATCCGGATACTGGCGATGTTTGAGGCCACACAGTaGAAGATGCCACCGTCCTCAGCTCGAAGTCCTGTG +
Preference number: 6 (lower is better)
Translates to: LIRILAMFEATQ*KMPPSSARSPV
Trigger: CACAGGACTTCGAGCTGAGGACGGTGGCATCTTCCACTGTGTGGCCTCAAACATCGCCAGTATCCGGATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559058.1
CDS CCA 72 bp AGTGACGGATCATCAAGGACCCATTGGCCAGCAAGGTaGAGTGGGTACTCTCTGGCAGCTCTACCCCATTCT +
Preference number: 6 (lower is better)
Translates to: SDGSSRTHWPAR*SGYSLAALPHS
Trigger: AGAATGGGGTAGAGCTGCCAGAGAGTACCCACTCCACCTTGCTGGCCAATGGGTCCTTGATGATCCGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327987.9
ENST00000559947.1
CDS CCA 72 bp AAGAGGACACAGAAGATGATGCAAGTGACCCCGATGTaGATGCCGATGACGATGCCTGTGGTGGACGTCTGG +
Preference number: 6 (lower is better)
Translates to: KRTQKMMQVTPM*MPMTMPVVDVW
Trigger: CCAGACGTCCACCACAGGCATCGTCATCGGCATCCACATCGGGGTCACTTGCATCATCTTCTGTGTCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327987.9
ENST00000558354.5
CDS CAA 72 bp GCAACTGTGCAAATGCCCTCAGAGCCAGGAAGAAACTaGTCAGCGATCAGACAGGAAAGAGGCGGCGTGCCA +
Preference number: 6 (lower is better)
Translates to: ATVQMPSEPGRN*SAIRQERGGVP
Trigger: TGGCACGCCGCCTCTTTCCTGTCTGATCGCTGACAAGTTTCTTCCTGGCTCTGAGGGCATTTGCACAGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559947.1
CDS GCA 72 bp ATGCTCCCCTCAAAGACACAAAGCGGACTGTGGCATTaGCATCTCCATGCTGGTTGTAGGCGAGCAGCTTCA +
Preference number: 6 (lower is better)
Translates to: MLPSKTQSGLWH*HLHAGCRRAAS
Trigger: TGAAGCTGCTCGCCTACAACCAGCATGGAGATGGCAATGCCACAGTCCGCTTTGTGTCTTTGAGGGGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327987.9
ENST00000558354.5
CDS CCA 72 bp ATGGTCAGTGTGCTGTTGTTATTCTTGAGCCTGACGTaGCCTCCTGGCCCCAGCACCTGTCCATTTTTCAGC +
Preference number: 6 (lower is better)
Translates to: MVSVLLLFLSLT*PPGPSTCPFFS
Trigger: GCTGAAAAATGGACAGGTGCTGGGGCCAGGAGGCCACGTCAGGCTCAAGAATAACAACAGCACACTGACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559231.1
CDS CCA 72 bp TCTCAGATGCTCCCCTCAAAGACACAAAGCGGACTGTaGCATTGCCATCTCCATGCTGGTTGTAGGCGAGCA +
Preference number: 6 (lower is better)
Translates to: SQMLPSKTQSGL*HCHLHAGCRRA
Trigger: TGCTCGCCTACAACCAGCATGGAGATGGCAATGCCACAGTCCGCTTTGTGTCTTTGAGGGGAGCATCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327987.9
ENST00000558354.5
CDS CCA 72 bp GGGCGACCATCCTCTTCCCAGGTCACAGGGATAGAATaGACCCCCACAGAGAACAAACAGGATTCCACATTC +
Preference number: 6 (lower is better)
Translates to: GRPSSSQVTGIE*TPTENKQDSTF
Trigger: GAATGTGGAATCCTGTTTGTTCTCTGTGGGGGTCCATTCTATCCCTGTGACCTGGGAAGAGGATGGTCGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559231.1
CDS CAA 72 bp TCCCAGCTACTGGGGAAGCTGAGGCACAAGAATTGCTaGAACCCGGGAGATAGAAGTTGCAGTCAGTCGAGA +
Preference number: 6 (lower is better)
Translates to: SQLLGKLRHKNC*NPGDRSCSQSR
Trigger: TCTCGACTGACTGCAACTTCTATCTCCCGGGTTCAAGCAATTCTTGTGCCTCAGCTTCCCCAGTAGCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559947.1
CDS CAA 72 bp CATTGTGCGCGGCGAATGGAGAAAATAAGACAGCCATaGTCCTCGCACGCCAAACGAGGGTTTGATGTCGCT +
Preference number: 6 (lower is better)
Translates to: HCARRMEKIRQP*SSHAKRGFDVA
Trigger: AGCGACATCAAACCCTCGTTTGGCGTGCGAGGACAATGGCTGTCTTATTTTCTCCATTCGCCGCGCACAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559058.1
CDS GCA 72 bp ACTGATTCATCACTCACCAGCCGTTCAGAGCAACTGTaGAAATGCCCTCAGAGCCAGGAAGAAACTTGTCAG +
Preference number: 6 (lower is better)
Translates to: TDSSLTSRSEQL*KCPQSQEETCQ
Trigger: CTGACAAGTTTCTTCCTGGCTCTGAGGGCATTTGCACAGTTGCTCTGAACGGCTGGTGAGTGATGAATCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559947.1
CDS CCA 72 bp GGGCAGCAATGTGTACCTCTCATTGTCCGTGTCAATTaGGACTCTGTTCTTCTCCCAAGTGATCAGGGGTTT +
Preference number: 6 (lower is better)
Translates to: GQQCVPLIVRVN*DSVLLPSDQGF
Trigger: AAACCCCTGATCACTTGGGAGAAGAACAGAGTCCCAATTGACACGGACAATGAGAGGTACACATTGCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327987.9
ENST00000558354.5
ENST00000559058.1