RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IFTAP (Homo sapiens)

Ensembl gene IDs: ENSG00000166352

Ensembl transcript IDs: ENST00000446510.6, ENST00000528092.5, ENST00000530697.6, ENST00000532470.3, ENST00000534635.5, ENST00000617650.5, ENST00000676885.1, ENST00000676921.1, ENST00000677097.1, ENST00000677116.1, ENST00000677673.1, ENST00000678060.1, ENST00000678480.1, ENST00000678950.1, ENST00000679022.1, ENST00000679072.1, ENST00000679127.1

Found 622 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCTGCCCGCAGAGGTGGAGTCTACAGAGGCACACCAGGCCTCCTTaGGCTGCAGTGGGCTCCACCCAGTTCAAGCTTCCCAGAGGCTTT +
Preference number: 1 (lower is better)
Translates to: PCPQRWSLQRHTRPP*AAVGSTQFKLPRGF
Trigger: AAAGCCTCTGGGAAGCTTGAACTGGGTGGAGCCCACTGCAGCTCAAGGAGGCCTGGTGTGCCTCTGTAGACTCCACCTCTGCGGGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR GCA 90 bp CCCACCTCACTTCCACCTTGCAGTTCGATCTCTGTTAGCTGTGCTTaGAGTGGGGGAGGCTCCATGGACGTGGGACCCTCCAAGCCACGC +
Preference number: 1 (lower is better)
Translates to: PTSLPPCSSISVSCA*SGGGSMDVGPSKPR
Trigger: GCGTGGCTTGGAGGGTCCCACGTCCATGGAGCCTCCCCCACTGCAAGCACAGCTAACAGAGATCGAACTGCAAGGTGGAAGTGAGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 90 bp CGATCTCTGTTAGCTGTGCTTGCAGTGGGGGAGGCTCCATGGACGTaGGACCCTCCAAGCCACGCATGGGATATAATCTCCTGGTGTGCC +
Preference number: 1 (lower is better)
Translates to: RSLLAVLAVGEAPWT*DPPSHAWDIISWCA
Trigger: GGCACACCAGGAGATTATATCCCATGCGTGGCTTGGAGGGTCCCACGTCCATGGAGCCTCCCCCACTGCAAGCACAGCTAACAGAGATCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR GCA 90 bp GGACGTTTAAGTCTGCAGAAGTTTCTGCTGCCTTTTGTTCAGCTATaGCCTGCCCGCAGAGGTGGAGTCTACAGAGGCACACCAGGCCTC +
Preference number: 1 (lower is better)
Translates to: GRLSLQKFLLPFVQL*PARRGGVYRGTPGL
Trigger: GAGGCCTGGTGTGCCTCTGTAGACTCCACCTCTGCGGGCAGGGCATAGCTGAACAAAAGGCAGCAGAAACTTCTGCAGACTTAAACGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 90 bp CCAATGGAATGTGAGCCGACATTAAGGACCCTGAGTCCTAAGCCTTaGGGAAACATGCTGCCCCCATGTTCTTCTCTCCTCCCCTCCAGG +
Preference number: 1 (lower is better)
Translates to: PMECEPTLRTLSPKP*GNMLPPCSSLLPSR
Trigger: CCTGGAGGGGAGGAGAGAAGAACATGGGGGCAGCATGTTTCCCCAAGGCTTAGGACTCAGGGTCCTTAATGTCGGCTCACATTCCATTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
3UTR CCA 90 bp AGAGGTGGAGTCTACAGAGGCACACCAGGCCTCCTTGAGCTGCAGTaGGCTCCACCCAGTTCAAGCTTCCCAGAGGCTTTGTTTACTTAC +
Preference number: 1 (lower is better)
Translates to: RGGVYRGTPGLLELQ*APPSSSFPEALFTY
Trigger: GTAAGTAAACAAAGCCTCTGGGAAGCTTGAACTGGGTGGAGCCCACTGCAGCTCAAGGAGGCCTGGTGTGCCTCTGTAGACTCCACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 90 bp CTTCTAACAGTCAGAACCCTCAGCTGCAGGTCTGTTGGAATTTGCTaGAAGTCCAGTTTTGCCTGGGTATCACCAGTGGAGGTGGCAGAA +
Preference number: 1 (lower is better)
Translates to: LLTVRTLSCRSVGIC*KSSFAWVSPVEVAE
Trigger: TTCTGCCACCTCCACTGGTGATACCCAGGCAAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGGGTTCTGACTGTTAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 90 bp ACATTTCTCAGCCTCCCCTGTGGCCAGTATGAACATGTGACTAAGTaGTCACCAATGGAATGTGAGCCGACATTAAGGACCCTGAGTCCT +
Preference number: 1 (lower is better)
Translates to: TFLSLPCGQYEHVTK*SPMECEPTLRTLSP
Trigger: AGGACTCAGGGTCCTTAATGTCGGCTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTGGCCACAGGGGAGGCTGAGAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
3UTR TCA 90 bp TGTGTCTGTGAGGGTGTTGCCAAAGGAGATTCACATTTGAGTCAGTaGACTGGGAGAGACAGACCCATCCTCAATCTAGATGGGCACCAT +
Preference number: 1 (lower is better)
Translates to: CVCEGVAKGDSHLSQ*TGRDRPILNLDGHH
Trigger: ATGGTGCCCATCTAGATTGAGGATGGGTCTGTCTCTCCCAGTTCACTGACTCAAATGTGAATCTCCTTTGGCAACACCCTCACAGACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR GCA 90 bp AACCCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTaGCTGGGTATCACCAGTGGAGGTGGCAGAACAGTAAATATTGCA +
Preference number: 1 (lower is better)
Translates to: NPQLQVCWNLLEVQF*LGITSGGGRTVNIA
Trigger: TGCAATATTTACTGTTCTGCCACCTCCACTGGTGATACCCAGGCAAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 90 bp AGTATTAAGGTGGAAGTGTCCCAATTTTCCAGGTACTGTCTGTCATaGCTTCCCTTGGCTAGGAAAGGGAATTCCCCAACCCTTTGCACT +
Preference number: 1 (lower is better)
Translates to: SIKVEVSQFSRYCLS*LPLARKGNSPTLCT
Trigger: AGTGCAAAGGGTTGGGGAATTCCCTTTCCTAGCCAAGGGAAGCCATGACAGACAGTACCTGGAAAATTGGGACACTTCCACCTTAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 90 bp CTGTTGGAATTTGCTGGAAGTCCAGTTTTGCCTGGGTATCACCAGTaGAGGTGGCAGAACAGTAAATATTGCAGAACGGCAAATGTTGCT +
Preference number: 1 (lower is better)
Translates to: LLEFAGSPVLPGYHQ*RWQNSKYCRTANVA
Trigger: AGCAACATTTGCCGTTCTGCAATATTTACTGTTCTGCCACCTCCACTGGTGATACCCAGGCAAAACTGGACTTCCAGCAAATTCCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR GCA 90 bp CCTTTCTGTTTATTAGTTTTCCTTCTAACAGTCAGAACCCTCAGCTaGAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTGCCTGGGTA +
Preference number: 1 (lower is better)
Translates to: PFCLLVFLLTVRTLS*RSVGICWKSSFAWV
Trigger: TACCCAGGCAAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGGGTTCTGACTGTTAGAAGGAAAACTAATAAACAGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 90 bp CCTAGAATCAATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTaGTACCAGTTGTTCCTTTCCATGTTGAGTGCTTCCTTCAGGAGC +
Preference number: 1 (lower is better)
Translates to: PRINGLYNLACFCSG*YQLFLSMLSASFRS
Trigger: GCTCCTGAAGGAAGCACTCAACATGGAAAGGAACAACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATTGATTCTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 90 bp ATGCAGCATTTCTTTGAAGGGATGAATTACAAAATCAAGGCAGTGTaGAGAATGACTGAATTCCCTGTGGAGTACCTCTTCCGTCTGTTT +
Preference number: 1 (lower is better)
Translates to: MQHFFEGMNYKIKAV*RMTEFPVEYLFRLF
Trigger: AAACAGACGGAAGAGGTACTCCACAGGGAATTCAGTCATTCTCCACACTGCCTTGATTTTGTAATTCATCCCTTCAAAGAAATGCTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676921.1
3UTR TCA 90 bp CATCTGCAATTGTTCTTTACTCTCAAGAAAGTGGGATCATGTTTCTaGCCTTTGATACAGCACCCCACATCACTTAGTGCAATGCTTTCA +
Preference number: 1 (lower is better)
Translates to: HLQLFFTLKKVGSCF*PLIQHPTSLSAMLS
Trigger: TGAAAGCATTGCACTAAGTGATGTGGGGTGCTGTATCAAAGGTCAGAAACATGATCCCACTTTCTTGAGAGTAAAGAACAATTGCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR CCA 90 bp ATAGCTTGTAATTATTTGTGTATACATCTCTCTTCCGTACTTAATTaGACCATGTCTAACTTGCCTGTATCCTCCCCACTGCCTAGCATA +
Preference number: 1 (lower is better)
Translates to: IACNYLCIHLSSVLN*TMSNLPVSSPLPSI
Trigger: TATGCTAGGCAGTGGGGAGGATACAGGCAAGTTAGACATGGTCCAATTAAGTACGGAAGAGAGATGTATACACAAATAATTACAAGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR TCA 90 bp GAACACCCTTCTTTAGCTTGGAGAAGTTTGTTATTACCGATTATCTaGAGCCTTCTTCTCTTAACTCGTCAAAGTCATTCTCTATCCAAC +
Preference number: 1 (lower is better)
Translates to: EHPSLAWRSLLLPII*SLLLLTRQSHSLSN
Trigger: GTTGGATAGAGAATGACTTTGACGAGTTAAGAGAAGAAGGCTTCAGATAATCGGTAATAACAAACTTCTCCAAGCTAAAGAAGGGTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR TCA 90 bp AACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTTaGGGAGTATCTCTGTGGCGTTTTCTGTATGTCCTGAATTTGAAT +
Preference number: 1 (lower is better)
Translates to: NFGESDNYVSWSCSS*GVSLWRFLYVLNLN
Trigger: ATTCAAATTCAGGACATACAGAAAACGCCACAGAGATACTCCTCAAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR GCA 90 bp GGCCTTCATCCCTCTTTTCTCCTTGCCTTAATGCATGTATGGGTATaGTACATAATTAGCGCTTCATCATGTGTTTTTATATTCTCTAGT +
Preference number: 1 (lower is better)
Translates to: GLHPSFLLALMHVWV*YIISASSCVFIFSS
Trigger: ACTAGAGAATATAAAAACACATGATGAAGCGCTAATTATGTAGCATACCCATACATGCATTAAGGCAAGGAGAAAAGAGGGATGAAGGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR TCA 90 bp AAGATGAATGTTATCAAACCAAGGCAGTGTTGGTACAGTACAGGTTaGATATCTCTTCTCCAAAATGCTTGGGATGAAGTGTTTTGGATT +
Preference number: 1 (lower is better)
Translates to: KMNVIKPRQCWYSTG*ISLLQNAWDEVFWI
Trigger: AATCCAAAACACTTCATCCCAAGCATTTTGGAGAAGAGATATTCAACCTGTACTGTACCAACACTGCCTTGGTTTGATAACATTCATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
3UTR TCA 90 bp AATTGTTCTTTACTCTCAAGAAAGTGGGATCATGTTTCTGACCTTTaGTACAGCACCCCACATCACTTAGTGCAATGCTTTCATCAAAAT +
Preference number: 1 (lower is better)
Translates to: NCSLLSRKWDHVSDL*YSTPHHLVQCFHQN
Trigger: ATTTTGATGAAAGCATTGCACTAAGTGATGTGGGGTGCTGTATCAAAGGTCAGAAACATGATCCCACTTTCTTGAGAGTAAAGAACAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR GCA 90 bp CAGCTAGGACCCAGACCTACTCATATTGGCAATTTTTCTCTAATATaGTACAATGTGTTTTCATCTGCAATTGTTCTTTACTCTCAAGAA +
Preference number: 1 (lower is better)
Translates to: QLGPRPTHIGNFSLI*YNVFSSAIVLYSQE
Trigger: TTCTTGAGAGTAAAGAACAATTGCAGATGAAAACACATTGTAGCATATTAGAGAAAAATTGCCAATATGAGTAGGTCTGGGTCCTAGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR CAA 90 bp GCCCTGCCCGCAGAGGTGGAGTCTACAGAGGCACACCAGGCCTCCTaGAGCTGCAGTGGGCTCCACCCAGTTCAAGCTTCCCAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: ALPAEVESTEAHQAS*SCSGLHPVQASQRL
Trigger: AAGCCTCTGGGAAGCTTGAACTGGGTGGAGCCCACTGCAGCTCAAGGAGGCCTGGTGTGCCTCTGTAGACTCCACCTCTGCGGGCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR GCA 90 bp GCAATGTCCCACCCTGCTTCAGCTCACACTCTGTGGGCTGCACCCACTGTCCGAATGTGTGGCTCTGTCTaGAGCACCATTTGGGGTTTG +
Preference number: 2 (lower is better)
Translates to: AMSHPASAHTLWAAPTVRMCGSV*STIWGL
Trigger: CAAACCCCAAATGGTGCTGCAGACAGAGCCACACAT...TCGGACAGTGGGTGCAGCCCACAGAGTGTGAGCTGAAGCAGGGTGGGACATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp CCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGAGATGTCAGTCGGCTCACAGGTAGGAGGCTaGGCCACAAAAGGGATACAG +
Preference number: 2 (lower is better)
Translates to: PLEASSQRGTRLYEMSVGSQVGG*ATKGIQ
Trigger: CTGTATCCCTTTTGTGGCCCAGCCTCCTACCTGTGA...GCCGACTGACATCTCATACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677673.1
3UTR-3UTR GCA 90 bp TGCCTGATCGTTCCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGAGAATTCCCCAACCCTTTaGACTTCCCGGGTGAGGCAA +
Preference number: 2 (lower is better)
Translates to: CLIVPLEASSQRGTRLYENSPTL*TSRVRQ
Trigger: TTGCCTCACCCGGGAAGTGCAAAGGGTTGGGGAATT...CTCATACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGGAACGATCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp TTGCTGCCTGATCGTTCCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGGTGTGTCCATGTGTaGCTCTGTCTGCAGCACCAT +
Preference number: 2 (lower is better)
Translates to: LLPDRSSGSFISEGHPAVWCVHV*LCLQHH
Trigger: ATGGTGCTGCAGACAGAGCCACACATGGACACACCA...TACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGGAACGATCAGGCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp CTGCCTTTTGTTCAGCTATGCCCTGCCCGCAGAGGTGGAGTCTACAGAGGCACATGGTGTGTCCATGTGTaGCTCTGTCTGCAGCACCAT +
Preference number: 2 (lower is better)
Translates to: LPFVQLCPARRGGVYRGTWCVHV*LCLQHH
Trigger: ATGGTGCTGCAGACAGAGCCACACATGGACACACCA...TGTGCCTCTGTAGACTCCACCTCTGCGGGCAGGGCATAGCTGAACAAAAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR TCA 90 bp TCGTCAAAGTCATTCTCTATCCAACTTTGTTCTGTTGCTGGCGAGGAGCTGCATCACACCAGGCCTCCTTaGGCTGCAGTGGGCTCCACC +
Preference number: 2 (lower is better)
Translates to: SSKSFSIQLCSVAGEELHHTRPP*AAVGST
Trigger: GGTGGAGCCCACTGCAGCTCAAGGAGGCCTGGTGTG...ATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGGATAGAGAATGACTTTGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp GGGGGAGGCTCCATGGACGTGGGACCCTCCAAGCCACGCATGGGATATAATCTCGTCTGCAGCACCATTTaGGGTTTGATTGCTTCTATG +
Preference number: 2 (lower is better)
Translates to: GGGSMDVGPSKPRMGYNLVCSTI*GLIASM
Trigger: CATAGAAGCAATCAAACCCCAAATGGTGCTGCAGAC...GAGATTATATCCCATGCGTGGCTTGGAGGGTCCCACGTCCATGGAGCCTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp CTGCCTTTTGTTCAGCTATGCCCTGCCCGCAGAGGTGGAGTCTACAGAGGCACACCTCCAAGCCACGCATaGGATATAATCTCCTGGTGT +
Preference number: 2 (lower is better)
Translates to: LPFVQLCPARRGGVYRGTPPSHA*DIISWC
Trigger: ACACCAGGAGATTATATCCCATGCGTGGCTTGGAGG...TGTGCCTCTGTAGACTCCACCTCTGCGGGCAGGGCATAGCTGAACAAAAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp TGCCTGATCGTTCCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGAGCCTCCAAGCCACGCATaGGATATAATCTCCTGGTGT +
Preference number: 2 (lower is better)
Translates to: CLIVPLEASSQRGTRLYEPPSHA*DIISWC
Trigger: ACACCAGGAGATTATATCCCATGCGTGGCTTGGAGG...CTCATACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGGAACGATCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CAA 90 bp GCCAGCGTGGCTAGAATAAAGCAGGCAGGAGATGGAAGAGCAGACTaGCTGAGTCATCTGGCCTTCATCTTTCTCCTGTGCTGGGTGCTT +
Preference number: 2 (lower is better)
Translates to: ASVARIKQAGDGRAD*LSHLAFIFLLCWVL
Trigger: AAGCACCCAGCACAGGAGAAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTTTATTCTAGCCACGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR CAA 90 bp GTGGAAGTGTCCCAATTTTCCAGGTACTGTCTGTCATGGCTTCCCTaGGCTAGGAAAGGGAATTCCCCAACCCTTTGCACTTCCCGGGTG +
Preference number: 2 (lower is better)
Translates to: VEVSQFSRYCLSWLP*ARKGNSPTLCTSRV
Trigger: CACCCGGGAAGTGCAAAGGGTTGGGGAATTCCCTTTCCTAGCCAAGGGAAGCCATGACAGACAGTACCTGGAAAATTGGGACACTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR TCA 90 bp CCCCCATGTTCTTCTCTCCTCCCCTCCAGGTACGATGATGACCTGACCTGGAACAGTGTGGAGAATGACTaGATTCCCTGTGGAGTACCT +
Preference number: 2 (lower is better)
Translates to: PPCSSLLPSRYDDDLTWNSVEND*IPCGVP
Trigger: AGGTACTCCACAGGGAATTCAGTCATTCTCCACACT...GTTCCAGGTCAGGTCATCATCGTACCTGGAGGGGAGGAGAGAAGAACATGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676921.1
3UTR-3UTR TCA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTCCTTCAGCCACAGACTaGAGGCTGTACTGCCGGCTT +
Preference number: 2 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFPSATD*RLYCRL
Trigger: AAGCCGGCAGTACAGCCTTCAGTCTGTGGCTGAAGG...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR GCA 90 bp TTCATCTTTCTCCTGTGCTGGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGTTCTGACTGGCTTCCTTaGTCCTCAGCTTGCAGACGG +
Preference number: 2 (lower is better)
Translates to: FIFLLCWVLPALKHWTPSSDWLP*SSACRR
Trigger: CCGTCTGCAAGCTGAGGAGCAAGGAAGCCAGTCAGA...ACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR CCA 90 bp TTTGCTGGAAGTCCAGTTTTGCCTGGGTATCACCAGTGGAGGTGGCAGAACAGTCTTGTTGGAGGACAGTaGTTGGGCCTCCTCTTGAGG +
Preference number: 2 (lower is better)
Translates to: FAGSPVLPGYHQWRWQNSLVGGQ*LGLLLR
Trigger: CCTCAAGAGGAGGCCCAACCACTGTCCTCCAACAAG...ACTGTTCTGCCACCTCCACTGGTGATACCCAGGCAAAACTGGACTTCCAGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CAA 90 bp ACCCACTGTCCGACAAGCCCCAGTGAGATGAACCCAATACCTCAGTaGGAAATGCAGAAATCACCCATTTTCTGTGTCGCTCACGCTGGG +
Preference number: 2 (lower is better)
Translates to: THCPTSPSEMNPIPQ*EMQKSPIFCVAHAG
Trigger: CCCAGCGTGAGCGACACAGAAAATGGGTGATTTCTGCATTTCCAACTGAGGTATTGGGTTCATCTCACTGGGGCTTGTCGGACAGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp GTGCCTGATCCTGCTTTGTGTTCCAGTAAGGAGGGTGAGAAAGGTCACTACCAGTCACAGGTAGGAGGCTaGGCCACAAAAGGGATACAG +
Preference number: 2 (lower is better)
Translates to: VPDPALCSSKEGEKGHYQSQVGG*ATKGIQ
Trigger: CTGTATCCCTTTTGTGGCCCAGCCTCCTACCTGTGA...CTGGTAGTGACCTTTCTCACCCTCCTTACTGGAACACAAAGCAGGATCAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676921.1
3UTR-3UTR CCA 90 bp TTCATCTTTCTCCTGTGCTGGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGTTCACAGGTAGGAGGCTaGGCCACAAAAGGGATACAG +
Preference number: 2 (lower is better)
Translates to: FIFLLCWVLPALKHWTPSSQVGG*ATKGIQ
Trigger: CTGTATCCCTTTTGTGGCCCAGCCTCCTACCTGTGA...ACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR CCA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTAGGGGAAGGGGGAAATaGAGAGTTGCTGTTCCGTGG +
Preference number: 2 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFRGRGK*RVAVPW
Trigger: CCACGGAACAGCAACTCTCCATTTCCCCCTTCCCCT...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR CCA 90 bp AGGTGGAAGTGTCCCAATTTTCCAGGTACTGTCTGTCATGGCTTCCCTTGGCTACTTGTTGGAGGACAGTaGTTGGGCCTCCTCTTGAGG +
Preference number: 2 (lower is better)
Translates to: RWKCPNFPGTVCHGFPWLLVGGQ*LGLLLR
Trigger: CCTCAAGAGGAGGCCCAACCACTGTCCTCCAACAAG...TAGCCAAGGGAAGCCATGACAGACAGTACCTGGAAAATTGGGACACTTCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CAA 90 bp GGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGTTCTTCAGCTTTaGGACTCTTGGACTTACACTAGTGATTTGCCAAGGGCTCTCAGG +
Preference number: 2 (lower is better)
Translates to: GCFLPSNTGLQVLQL*DSWTYTSDLPRALR
Trigger: CCTGAGAGCCCTTGGCAAATCACTAGTGTAAGTCCAAGAGTCCAAAAGCTGAAGAACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR TCA 90 bp AGCTGCAGTGGGCTCCACCCAGTTCAAGCTTCCCAGAGGCTTTGTTTACTTACTGGTTGGGCCTCCTCTTaGGGTCAATCTAAGTGTTCT +
Preference number: 2 (lower is better)
Translates to: SCSGLHPVQASQRLCLLTGWASS*GQSKCS
Trigger: AGAACACTTAGATTGACCTCAAGAGGAGGCCCAACC...AGTAAGTAAACAAAGCCTCTGGGAAGCTTGAACTGGGTGGAGCCCACTGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR GCA 90 bp TTCATCTTTCTCCTGTGCTGGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGTCCTTGCTCCTCAGCTTaGAGACGGTCTATTGTGAGA +
Preference number: 2 (lower is better)
Translates to: FIFLLCWVLPALKHWTPSPCSSA*RRSIVR
Trigger: TCTCACAATAGACCGTCTGCAAGCTGAGGAGCAAGG...ACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR GCA 90 bp AGCTGCAGTGGGCTCCACCCAGTTCAAGCTTCCCAGAGGCTTTGTTTACTTACTATGTGTGGCTCTGTCTaGAGCACCATTTGGGGTTTG +
Preference number: 2 (lower is better)
Translates to: SCSGLHPVQASQRLCLLTMCGSV*STIWGL
Trigger: CAAACCCCAAATGGTGCTGCAGACAGAGCCACACAT...AGTAAGTAAACAAAGCCTCTGGGAAGCTTGAACTGGGTGGAGCCCACTGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp AACATGCTGCCCCCATGTTCTTCTCTCCTCCCCTCCAGGTACGATGATGACCTGGGTAGCACTGATCTGTaGCATGGCATACACTGTAAA +
Preference number: 2 (lower is better)
Translates to: NMLPPCSSLLPSRYDDDLGSTDL*HGIHCK
Trigger: TTTACAGTGTATGCCATGCCACAGATCAGTGCTACC...CAGGTCATCATCGTACCTGGAGGGGAGGAGAGAAGAACATGGGGGCAGCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
3UTR-3UTR CCA 90 bp TCCCATCTCCTCCAACCAGCCACAAGATGCAACAATGACATGGCGAGAGAGAATGGGCGGCAATCTCCTTaGCCTTGTTGCTCTATATCC +
Preference number: 2 (lower is better)
Translates to: SHLLQPATRCNNDMARENGRQSP*PCCSIS
Trigger: GGATATAGAGCAACAAGGCCAAGGAGATTGCCGCCC...ATTCTCTCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTGGAGGAGATGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR CAA 90 bp TTGGCATGTTTTTGCAGTGGCTGGTACCAGTTGTTCCTTTCCATGTaGAGTGCTTCCTTCAGGAGCTCTTGTAAGGCAGGCCTGTTGGTG +
Preference number: 2 (lower is better)
Translates to: LACFCSGWYQLFLSM*SASFRSSCKAGLLV
Trigger: CACCAACAGGCCTGCCTTACAAGAGCTCCTGAAGGAAGCACTCAACATGGAAAGGAACAACTGGTACCAGCCACTGCAAAAACATGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR GCA 90 bp TTCATCTTTCTCCTGTGCTGGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGTGGGGAAATGGAGAGTTaGTGTTCCGTGGGTATAGTT +
Preference number: 2 (lower is better)
Translates to: FIFLLCWVLPALKHWTPSGEMES*CSVGIV
Trigger: AACTATACCCACGGAACAGCAACTCTCCATTTCCCC...ACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR GCA 90 bp TCGTCAAAGTCATTCTCTATCCAACTTTGTTCTGTTGCTGGCGAGGAGCTGCATGGCAATGTCCCACCCTaGTTCAGCTCACACTCTGTG +
Preference number: 2 (lower is better)
Translates to: SSKSFSIQLCSVAGEELHGNVPP*FSSHSV
Trigger: CACAGAGTGTGAGCTGAAGCAGGGTGGGACATTGCC...ATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGGATAGAGAATGACTTTGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR GCA 90 bp GAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTGCAGAAGGCAATGTCCCACCCTaGTTCAGCTCACACTCTGTG +
Preference number: 2 (lower is better)
Translates to: ENHYSLQSCQTGTFKSAEGNVPP*FSSHSV
Trigger: CACAGAGTGTGAGCTGAAGCAGGGTGGGACATTGCC...TTCTGCAGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR TCA 90 bp AGCCCAGTATTAAGGTGGAAGTGTCCCAATTTTCCAGGTACTGTCTGTCATGGCGGTTGGGCCTCCTCTTaGGGTCAATCTAAGTGTTCT +
Preference number: 2 (lower is better)
Translates to: SPVLRWKCPNFPGTVCHGGWASS*GQSKCS
Trigger: AGAACACTTAGATTGACCTCAAGAGGAGGCCCAACC...GCCATGACAGACAGTACCTGGAAAATTGGGACACTTCCACCTTAATACTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGTCACAGGTAGGAGGCTaGGCCACAAAAGGGATACAG +
Preference number: 2 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKSQVGG*ATKGIQ
Trigger: CTGTATCCCTTTTGTGGCCCAGCCTCCTACCTGTGA...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR CCA 90 bp TTCATCTTTCTCCTGTGCTGGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGTCTATATGCGACAACATaGGCAAACCTGAAGGGCATT +
Preference number: 2 (lower is better)
Translates to: FIFLLCWVLPALKHWTPSLYATT*ANLKGI
Trigger: AATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAG...ACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR CCA 90 bp CCAACTTTGTTCTGTTGCTGGCGAGGAGCTGCATTCCTTTGGAGGAGGAGAGAGAGCCCAGTATTAAGGTaGAAGTGTCCCAATTTTCCA +
Preference number: 2 (lower is better)
Translates to: PTLFCCWRGAAFLWRRRESPVLR*KCPNFP
Trigger: TGGAAAATTGGGACACTTCCACCTTAATACTGGGCT...CTCTCTCCTCCTCCAAAGGAATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR TCA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTTCTTTCCATAGATGCTaGTTCCTGTTCCCATTTCCC +
Preference number: 2 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFSFHRC*FLFPFP
Trigger: GGGAAATGGGAACAGGAATCAGCATCTATGGAAAGA...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR TCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGGTGGGATCATGTTTCTaGCCTTTGATACAGCACCCC +
Preference number: 2 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKVGSCF*PLIQHP
Trigger: GGGGTGCTGTATCAAAGGTCAGAAACATGATCCCAC...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR TCA 90 bp GCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTGCCTGGGTATCACCAGTGGGCACCATTTGGGGTTTaGTTGCTTCTATGCCTTTTT +
Preference number: 2 (lower is better)
Translates to: AGLLEFAGSPVLPGYHQWAPFGV*LLLCLF
Trigger: AAAAAGGCATAGAAGCAATCAAACCCCAAATGGTGC...CCACTGGTGATACCCAGGCAAAACTGGACTTCCAGCAAATTCCAACAGACCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR GCA 90 bp CTTCCTTGCTCCTCAGCTTGCAGACGGTCTATTGTGAGACTTCACCTTGTGATTCAACCAGCCACAAGATaGAACAATGACATGGCGAGA +
Preference number: 2 (lower is better)
Translates to: LPCSSACRRSIVRLHLVIQPATR*NNDMAR
Trigger: TCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTG...AATCACAAGGTGAAGTCTCACAATAGACCGTCTGCAAGCTGAGGAGCAAGGAAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR GCA 90 bp TTCATCTTTCTCCTGTGCTGGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGTTCCCTCTTTTCTCCTTaGCTTAATGCATGTATGGGT +
Preference number: 2 (lower is better)
Translates to: FIFLLCWVLPALKHWTPSSLFSP*LNACMG
Trigger: ACCCATACATGCATTAAGGCAAGGAGAAAAGAGGGA...ACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR GCA 90 bp CTAACAGTCAGAACCCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTGCAGAAGTTTCTGCTaGCTTTTGTTCAGCTATGCC +
Preference number: 2 (lower is better)
Translates to: LTVRTLSCRSVGICWKSSCRSFC*LLFSYA
Trigger: GGCATAGCTGAACAAAAGGCAGCAGAAACTTCTGCA...ACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGGGTTCTGACTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp AGCCCAGTATTAAGGTGGAAGTGTCCCAATTTTCCAGGTACTGTCTGTCATGGCGTGTTCTCAGAAGAATaGTGTGTCCATGTGTGGCTC +
Preference number: 2 (lower is better)
Translates to: SPVLRWKCPNFPGTVCHGVFSEE*CVHVWL
Trigger: GAGCCACACATGGACACACCATTCTTCTGAGAACAC...GCCATGACAGACAGTACCTGGAAAATTGGGACACTTCCACCTTAATACTGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp TCGTCAAAGTCATTCTCTATCCAACTTTGTTCTGTTGCTGGCGAGGAGCTGCATTGTCATGGCTTCCCTTaGCTAGGAAAGGGAATTCCC +
Preference number: 2 (lower is better)
Translates to: SSKSFSIQLCSVAGEELHCHGFP*LGKGIP
Trigger: GGGAATTCCCTTTCCTAGCCAAGGGAAGCCATGACA...ATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGGATAGAGAATGACTTTGACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp CCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTGCCTGGGTATCTATCAAACTCCATGCTaGGAGAACCACTACTCTCTT +
Preference number: 2 (lower is better)
Translates to: PQLQVCWNLLEVQFCLGIYQTPC*ENHYSL
Trigger: AAGAGAGTAGTGGTTCTCCCAGCATGGAGTTTGATA...GATACCCAGGCAAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp TCTCGTGCCATGGTTTTTAGCTCCATCAGGTCATTTAAGGCCTTCTCTATGCTGCAGCTGCAGGTCTGTTaGAATTTGCTGGAAGTCCAG +
Preference number: 2 (lower is better)
Translates to: SRAMVFSSIRSFKAFSMLQLQVC*NLLEVQ
Trigger: CTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTG...CAGCATAGAGAAGGCCTTAAATGACCTGATGGAGCTAAAAACCATGGCACGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CAA 90 bp CTTCTCTTAACTCGTCAAAGTCATTCTCTATCCAACTTTGTTCTGTaGCTGGCGAGGAGCTGCATTCCTTTGGAGGAGGAGAGAGAGACT +
Preference number: 2 (lower is better)
Translates to: LLLTRQSHSLSNFVL*LARSCIPLEEERET
Trigger: AGTCTCTCTCTCCTCCTCCAAAGGAATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGGATAGAGAATGACTTTGACGAGTTAAGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CAA 90 bp ATAGTTTCTGCTGAAAGATCCGCTGTTAGTCTGATGGGCTTCCCTTaGTGGGTAACCCCACCTTTCTCTCTGGCTGCCCTTAACATTTTT +
Preference number: 2 (lower is better)
Translates to: IVSAERSAVSLMGFP*WVTPPFSLAALNIF
Trigger: AAAAATGTTAAGGGCAGCCAGAGAGAAAGGTGGGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGCGGATCTTTCAGCAGAAACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CAA 90 bp TCCATGTTGAGTGCTTCCTTCAGGAGCTCTTGTAAGGCAGGCCTGTaGGTGACAAAATCTGTCAGCATTTGCTGGTCTGTAAAGGATTGT +
Preference number: 2 (lower is better)
Translates to: SMLSASFRSSCKAGL*VTKSVSICWSVKDC
Trigger: ACAATCCTTTACAGACCAGCAAATGCTGACAGATTTTGTCACCAACAGGCCTGCCTTACAAGAGCTCCTGAAGGAAGCACTCAACATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR TCA 90 bp TTCATCTTTCTCCTGTGCTGGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGTGACTCTAGGGCAACATaGAATCAAGAGCATTCTTTT +
Preference number: 2 (lower is better)
Translates to: FIFLLCWVLPALKHWTPSDSRAT*NQEHSF
Trigger: AAAAGAATGCTCTTGATTTCATGTTGCCCTAGAGTC...ACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR GCA 90 bp CACAGAAAGAAACCATCATCTCTAATCCCAAAATGGCCTTTCAGTAAGCCCTTCAGCCTTGGGGAAACATaGTGCCCCCATGTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: HRKKPSSLIPKWPFSKPFSLGET*CPHVLL
Trigger: GAGAAGAACATGGGGGCAGCATGTTTCCCCAAGGCT...GAAGGGCTTACTGAAAGGCCATTTTGGGATTAGAGATGATGGTTTCTTTCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
3UTR-3UTR GCA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTTACATTCCAGAGATCTaGTGCACAACACTGTGCATA +
Preference number: 2 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFYIPEI*CTTLCI
Trigger: TATGCACAGTGTTGTGCAGCAGATCTCTGGAATGTA...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR GCA 90 bp GGTGACAAAATCTGTCAGCATTTGCTGGTCTGTAAAGGATTGTATTTCTCCTTGTCTGTTAGCTGTGCTTaGAGTGGGGGAGGCTCCATG +
Preference number: 2 (lower is better)
Translates to: GDKICQHLLVCKGLYFSLSVSCA*SGGGSM
Trigger: CATGGAGCCTCCCCCACTGCAAGCACAGCTAACAGA...CAAGGAGAAATACAATCCTTTACAGACCAGCAAATGCTGACAGATTTTGTCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR GCA 90 bp TGCTGGGAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTTGCAGAAGTTTCTGCTaGCTTTTGTTCAGCTATGCC +
Preference number: 2 (lower is better)
Translates to: CWENHYSLQSCQTGTFKSCRSFC*LLFSYA
Trigger: GGCATAGCTGAACAAAAGGCAGCAGAAACTTCTGCA...AGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTCCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp CCCTGTGGCCAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGCCGAAAATCAAGGCAGTGTaGAGAATGACTGAATTCCCT +
Preference number: 2 (lower is better)
Translates to: PCGQYEHVTKWSPMECEPKIKAV*RMTEFP
Trigger: AGGGAATTCAGTCATTCTCCACACTGCCTTGATTTT...CGGCTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTGGCCACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676921.1
3UTR-3UTR CCA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGGGCGGCAATCTCCTTaGCCTTGTTGCTCTATATCC +
Preference number: 2 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYGRQSP*PCCSIS
Trigger: GGATATAGAGCAACAAGGCCAAGGAGATTGCCGCCC...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR CCA 90 bp AAATTCTTTTCTTTAAGAATGTTGAGTATTGGCCCCCACTCTCTTCTGGCTTGTTCAGCTCACACTCTGTaGGCTGCACCCACTGTCCGA +
Preference number: 2 (lower is better)
Translates to: KFFSLRMLSIGPHSLLACSAHTL*AAPTVR
Trigger: TCGGACAGTGGGTGCAGCCCACAGAGTGTGAGCTGA...ACAAGCCAGAAGAGAGTGGGGGCCAATACTCAACATTCTTAAAGAAAAGAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp AGAATGTTGAGTATTGGCCCCCACTCTCTTCTGGCTTGTATAGTTTCTGCTGAAAAGTCCAGTTTTGCCTaGGTATCACCAGTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: RMLSIGPHSLLACIVSAEKSSFA*VSPVEV
Trigger: CACCTCCACTGGTGATACCCAGGCAAAACTGGACTT...TTCAGCAGAAACTATACAAGCCAGAAGAGAGTGGGGGCCAATACTCAACATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CAA 90 bp CTCTGTCTGCAGCACCATTTGGGGTTTGATTGCTTCTATGCCTTTTaGTTTCTTCCAAGCTGCAGGAGATCACCACTTGATTCACAGGAA +
Preference number: 2 (lower is better)
Translates to: LCLQHHLGFDCFYAF*FLPSCRRSPLDSQE
Trigger: TTCCTGTGAATCAAGTGGTGATCTCCTGCAGCTTGGAAGAAACAAAAAGGCATAGAAGCAATCAAACCCCAAATGGTGCTGCAGACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR GCA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTTCTCCTTGGCCTTGTTaGTCTATATCCCTAATAACA +
Preference number: 2 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFSPWPC*SISLIT
Trigger: TGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGA...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR GCA 90 bp CTTCCTTGCTCCTCAGCTTGCAGACGGTCTATTGTGAGACTTCACCTTGTGATTTCCCTCTTTTCTCCTTaGCTTAATGCATGTATGGGT +
Preference number: 2 (lower is better)
Translates to: LPCSSACRRSIVRLHLVISLFSP*LNACMG
Trigger: ACCCATACATGCATTAAGGCAAGGAGAAAAGAGGGA...AATCACAAGGTGAAGTCTCACAATAGACCGTCTGCAAGCTGAGGAGCAAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR GCA 90 bp TTTGCTGGAAGTCCAGTTTTGCCTGGGTATCACCAGTGGAGGTGGCAGAACAGTGCTCCAAATTTTGTTTaGAGGAGTATACCTTACTCA +
Preference number: 2 (lower is better)
Translates to: FAGSPVLPGYHQWRWQNSAPNFV*RSIPYS
Trigger: TGAGTAAGGTATACTCCTGCAAACAAAATTTGGAGC...ACTGTTCTGCCACCTCCACTGGTGATACCCAGGCAAAACTGGACTTCCAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR GCA 90 bp GCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTGCCTGGGTATCACCAGTGGTACCTCAGTTGGAAATaGAGAAATCACCCATTTTCT +
Preference number: 2 (lower is better)
Translates to: AGLLEFAGSPVLPGYHQWYLSWK*RNHPFS
Trigger: AGAAAATGGGTGATTTCTGCATTTCCAACTGAGGTA...CCACTGGTGATACCCAGGCAAAACTGGACTTCCAGCAAATTCCAACAGACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR GCA 90 bp TTGGTGACAAAATCTGTCAGCATTTGCTGGTCTGTAAAGGATTGTATTTCTCCTTCTGTTAGCTGTGCTTaGAGTGGGGGAGGCTCCATG +
Preference number: 2 (lower is better)
Translates to: LVTKSVSICWSVKDCISPSVSCA*SGGGSM
Trigger: CATGGAGCCTCCCCCACTGCAAGCACAGCTAACAGA...AGGAGAAATACAATCCTTTACAGACCAGCAAATGCTGACAGATTTTGTCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp CAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGCCGACATTAAGGCTATTGTGTAGTCCTTaGGTAGCACTGATCTGTGGC +
Preference number: 2 (lower is better)
Translates to: QYEHVTKWSPMECEPTLRLLCSP*VALICG
Trigger: GCCACAGATCAGTGCTACCCAAGGACTACACAATAG...CCTTAATGTCGGCTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
3UTR-3UTR CCA 90 bp CTAAGACCATTGGAAAAGCCCAGTATTAAGGTGGAAGTGTCCCAATTTTCCAGGGTGTTCTCAGAAGAATaGTGTGTCCATGTGTGGCTC +
Preference number: 2 (lower is better)
Translates to: LRPLEKPSIKVEVSQFSRVFSEE*CVHVWL
Trigger: GAGCCACACATGGACACACCATTCTTCTGAGAACAC...CCTGGAAAATTGGGACACTTCCACCTTAATACTGGGCTTTTCCAATGGTCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR TCA 90 bp ATCCCCAAATCTGAAATCCATAATGCTCCAATGAGCATTGCCTTTGAGCATCATAGGCAGTGTGGAGAATaGCTGAATTCCCTGTGGAGT +
Preference number: 2 (lower is better)
Translates to: IPKSEIHNAPMSIAFEHHRQCGE*LNSLWS
Trigger: ACTCCACAGGGAATTCAGTCATTCTCCACACTGCCT...ATGATGCTCAAAGGCAATGCTCATTGGAGCATTATGGATTTCAGATTTGGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676921.1
3UTR-3UTR TCA 90 bp TGTAAGGCAGGCCTGTTGGTGACAAAATCTGTCAGCATTTGCTGGTCTGTAAAGGCACCATTTGGGGTTTaGTTGCTTCTATGCCTTTTT +
Preference number: 2 (lower is better)
Translates to: CKAGLLVTKSVSICWSVKAPFGV*LLLCLF
Trigger: AAAAAGGCATAGAAGCAATCAAACCCCAAATGGTGC...CTTTACAGACCAGCAAATGCTGACAGATTTTGTCACCAACAGGCCTGCCTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR GCA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATCAACCAGCCACAAGATaGAACAATGACATGGCGAGA +
Preference number: 2 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYQPATR*NNDMAR
Trigger: TCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTG...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR GCA 90 bp TTCATCTTTCTCCTGTGCTGGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGTCATCACTTAGTGCAATaGTTTCATCAAAATGGATCT +
Preference number: 2 (lower is better)
Translates to: FIFLLCWVLPALKHWTPSHHLVQ*FHQNGS
Trigger: AGATCCATTTTGATGAAAGCATTGCACTAAGTGATG...ACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR GCA 90 bp AGAAATCACCCATTTTCTGTGTCGCTCACGCTGGGAGCTGTAGACTGTAGCTGTAGACAGAAACAAACGTaGTCCAAATTTTGTTTGCAG +
Preference number: 2 (lower is better)
Translates to: RNHPFSVSLTLGAVDCSCRQKQT*SKFCLQ
Trigger: CTGCAAACAAAATTTGGAGCACGTTTGTTTCTGTCT...ACAGCTACAGTCTACAGCTCCCAGCGTGAGCGACACAGAAAATGGGTGATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR GCA 90 bp CTGGAAGTCCAGTTTTGCCTGGGTATCACCAGTGGAGGTGGCAGAACAGTAAATTACCTCAGTTGGAAATaGAGAAATCACCCATTTTCT +
Preference number: 2 (lower is better)
Translates to: LEVQFCLGITSGGGRTVNYLSWK*RNHPFS
Trigger: AGAAAATGGGTGATTTCTGCATTTCCAACTGAGGTA...ATTTACTGTTCTGCCACCTCCACTGGTGATACCCAGGCAAAACTGGACTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR GCA 90 bp CTAGAATCAATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACCAGTCTGGAAGTCCAGTTTTaGCTGGGTATCACCAGTGGA +
Preference number: 2 (lower is better)
Translates to: LESMVFTIWHVFAVAGTSLEVQF*LGITSG
Trigger: TCCACTGGTGATACCCAGGCAAAACTGGACTTCCAG...ACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATTGATTCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTTTACTCTCAAGAAAGTaGGATCATGTTTCTGACCTT +
Preference number: 2 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFLLSRK*DHVSDL
Trigger: AAGGTCAGAAACATGATCCCACTTTCTTGAGAGTAA...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR CCA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTGCCTTAATGCATGTATaGGTATGCTACATAATTAGC +
Preference number: 2 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFALMHV*VCYIIS
Trigger: GCTAATTATGTAGCATACCCATACATGCATTAAGGC...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR CCA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATAAGCAGAAAGTAGGATaGAGGTTGCCAGGGTTTAGG +
Preference number: 2 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYKQKVG*RLPGFR
Trigger: CCTAAACCCTGGCAACCTCCATCCTACTTTCTGCTT...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR CCA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTAAGTTCTTCAGCTTTTaGACTCTTGGACTTACACTA +
Preference number: 2 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFKFFSF*TLGLTL
Trigger: TAGTGTAAGTCCAAGAGTCCAAAAGCTGAAGAACTT...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR CCA 90 bp CTAGAATCAATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACCAGTCCTGGGTATCACCAGTaGAGGTGGCAGAACAGTAAA +
Preference number: 2 (lower is better)
Translates to: LESMVFTIWHVFAVAGTSPGYHQ*RWQNSK
Trigger: TTTACTGTTCTGCCACCTCCACTGGTGATACCCAGG...ACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATTGATTCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp GGTGACAAAATCTGTCAGCATTTGCTGGTCTGTAAAGGATTGTATTTCTCCTTGAAGTCCAGTTTTGCCTaGGTATCACCAGTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: GDKICQHLLVCKGLYFSLKSSFA*VSPVEV
Trigger: CACCTCCACTGGTGATACCCAGGCAAAACTGGACTT...CAAGGAGAAATACAATCCTTTACAGACCAGCAAATGCTGACAGATTTTGTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CAA 90 bp AATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACCAGTaGTTCCTTTCCATGTTGAGTGCTTCCTTCAGGAGCTCTTGTAAG +
Preference number: 2 (lower is better)
Translates to: NGLYNLACFCSGWYQ*FLSMLSASFRSSCK
Trigger: CTTACAAGAGCTCCTGAAGGAAGCACTCAACATGGAAAGGAACAACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR TCA 90 bp ATCCCCAAATCTGAAATCCATAATGCTCCAATGAGCATTGCCTTTGAGCATCATGCCAGTATGAACATGTaGCTAAGTGGTCACCAATGG +
Preference number: 2 (lower is better)
Translates to: IPKSEIHNAPMSIAFEHHASMNM*LSGHQW
Trigger: CCATTGGTGACCACTTAGTCACATGTTCATACTGGC...ATGATGCTCAAAGGCAATGCTCATTGGAGCATTATGGATTTCAGATTTGGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
3UTR-3UTR TCA 90 bp CTTCCTTGCTCCTCAGCTTGCAGACGGTCTATTGTGAGACTTCACCTTGTGATTGGGCATTATGCTAAGTaGAATAAGTCAATCACAGAA +
Preference number: 2 (lower is better)
Translates to: LPCSSACRRSIVRLHLVIGHYAK*NKSITE
Trigger: TTCTGTGATTGACTTATTTCACTTAGCATAATGCCC...AATCACAAGGTGAAGTCTCACAATAGACCGTCTGCAAGCTGAGGAGCAAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR TCA 90 bp TGGTACCAGTTGTTCCTTTCCATGTTGAGTGCTTCCTTCAGGAGCTCTTGTAAGGAGAGAGAGACTCTCTaGTTTTTAGAATTTTCCGCT +
Preference number: 2 (lower is better)
Translates to: WYQLFLSMLSASFRSSCKERETL*FLEFSA
Trigger: AGCGGAAAATTCTAAAAATCAGAGAGTCTCTCTCTC...CTTACAAGAGCTCCTGAAGGAAGCACTCAACATGGAAAGGAACAACTGGTACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR GCA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTACTCTGATAAATGAGTaGACACATGTAAATTTCCAC +
Preference number: 2 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFTLINE*THVNFH
Trigger: GTGGAAATTTACATGTGTGCACTCATTTATCAGAGT...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR GCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGTCTCCTTGGCCTTGTTaGTCTATATCCCTAATAACA +
Preference number: 2 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKSPWPC*SISLIT
Trigger: TGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGA...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR GCA 90 bp AGCCCAGTATTAAGGTGGAAGTGTCCCAATTTTCCAGGTACTGTCTGTCATGGCGCTCCAAATTTTGTTTaGAGGAGTATACCTTACTCA +
Preference number: 2 (lower is better)
Translates to: SPVLRWKCPNFPGTVCHGAPNFV*RSIPYS
Trigger: TGAGTAAGGTATACTCCTGCAAACAAAATTTGGAGC...GCCATGACAGACAGTACCTGGAAAATTGGGACACTTCCACCTTAATACTGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR GCA 90 bp GCTGGGAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTGCATTTGGGGTTTGATTaGTTCTATGCCTTTTTGTTT +
Preference number: 2 (lower is better)
Translates to: AGRTTTLFKAVRQGRLSLHLGFD*FYAFLF
Trigger: AAACAAAAAGGCATAGAAGCAATCAAACCCCAAATG...CAGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTCCCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTTCACAGGTAGGAGGCTaGGCCACAAAAGGGATACAG +
Preference number: 2 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSISQVGG*ATKGIQ
Trigger: CTGTATCCCTTTTGTGGCCCAGCCTCCTACCTGTGA...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR CCA 90 bp CTTCCTTGCTCCTCAGCTTGCAGACGGTCTATTGTGAGACTTCACCTTGTGATTGCCTTAATGCATGTATaGGTATGCTACATAATTAGC +
Preference number: 2 (lower is better)
Translates to: LPCSSACRRSIVRLHLVIALMHV*VCYIIS
Trigger: GCTAATTATGTAGCATACCCATACATGCATTAAGGC...AATCACAAGGTGAAGTCTCACAATAGACCGTCTGCAAGCTGAGGAGCAAGGAAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR CCA 90 bp TTAAGAATGTTGAGTATTGGCCCCCACTCTCTTCTGGCTTGTATAGTTTCTGCTGTCTGCAGCACCATTTaGGGTTTGATTGCTTCTATG +
Preference number: 2 (lower is better)
Translates to: LRMLSIGPHSLLACIVSAVCSTI*GLIASM
Trigger: CATAGAAGCAATCAAACCCCAAATGGTGCTGCAGAC...AGCAGAAACTATACAAGCCAGAAGAGAGTGGGGGCCAATACTCAACATTCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp AGGAGTATCTCTGTGGCGTTTTCTGTATGTCCTGAATTTGAATGTTGGCCTGCCGATGACGATTCTTTCTaGCTACTTCCTGCTAAAAAG +
Preference number: 2 (lower is better)
Translates to: RSISVAFSVCPEFECWPADDDSF*LLPAKK
Trigger: CTTTTTAGCAGGAAGTAGCCAGAAAGAATCGTCATC...GGCAGGCCAACATTCAAATTCAGGACATACAGAAAACGCCACAGAGATACTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp TGTAAGGCAGGCCTGTTGGTGACAAAATCTGTCAGCATTTGCTGGTCTGTAAAGGATGACGATTCTTTCTaGCTACTTCCTGCTAAAAAG +
Preference number: 2 (lower is better)
Translates to: CKAGLLVTKSVSICWSVKDDDSF*LLPAKK
Trigger: CTTTTTAGCAGGAAGTAGCCAGAAAGAATCGTCATC...CTTTACAGACCAGCAAATGCTGACAGATTTTGTCACCAACAGGCCTGCCTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp AAATTCTTTTCTTTAAGAATGTTGAGTATTGGCCCCCACTCTCTTCTGGCTTGTCAGCTGCAGGTCTGTTaGAATTTGCTGGAAGTCCAG +
Preference number: 2 (lower is better)
Translates to: KFFSLRMLSIGPHSLLACQLQVC*NLLEVQ
Trigger: CTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTG...ACAAGCCAGAAGAGAGTGGGGGCCAATACTCAACATTCTTAAAGAAAAGAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR GCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGATGCATGTATGGGTATaGTACATAATTAGCGCTTCA +
Preference number: 2 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKMHVWV*YIISAS
Trigger: TGAAGCGCTAATTATGTAGCATACCCATACATGCAT...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR GCA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATTCCCTCTTTTCTCCTTaGCTTAATGCATGTATGGGT +
Preference number: 2 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYSLFSP*LNACMG
Trigger: ACCCATACATGCATTAAGGCAAGGAGAAAAGAGGGA...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR GCA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTACAAGCACAAGTACGTaGATACAAGCACAGGCCTGC +
Preference number: 2 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSITSTST*IQAQAC
Trigger: GCAGGCCTGTGCTTGTATGCACGTACTTGTGCTTGT...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR GCA 90 bp AGCCCAGTATTAAGGTGGAAGTGTCCCAATTTTCCAGGTACTGTCTGTCATGGCCATTTGGGGTTTGATTaGTTCTATGCCTTTTTGTTT +
Preference number: 2 (lower is better)
Translates to: SPVLRWKCPNFPGTVCHGHLGFD*FYAFLF
Trigger: AAACAAAAAGGCATAGAAGCAATCAAACCCCAAATG...GCCATGACAGACAGTACCTGGAAAATTGGGACACTTCCACCTTAATACTGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp ATCCCCAAATCTGAAATCCATAATGCTCCAATGAGCATTGCCTTTGAGCATCATAGCCTGCACGCATCCTaGATATACTTTCATGATGTC +
Preference number: 2 (lower is better)
Translates to: IPKSEIHNAPMSIAFEHHSLHAS*IYFHDV
Trigger: GACATCATGAAAGTATATCCAGGATGCGTGCAGGCT...ATGATGCTCAAAGGCAATGCTCATTGGAGCATTATGGATTTCAGATTTGGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
3UTR-3UTR CCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGTTACTCTCAAGAAAGTaGGATCATGTTTCTGACCTT +
Preference number: 2 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKLLSRK*DHVSDL
Trigger: AAGGTCAGAAACATGATCCCACTTTCTTGAGAGTAA...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR CCA 90 bp ATGGTTTTTAGCTCCATCAGGTCATTTAAGGCCTTCTCTATGCTGTTTATTCTATGTCATGGCTTCCCTTaGCTAGGAAAGGGAATTCCC +
Preference number: 2 (lower is better)
Translates to: MVFSSIRSFKAFSMLFILCHGFP*LGKGIP
Trigger: GGGAATTCCCTTTCCTAGCCAAGGGAAGCCATGACA...TAGAATAAACAGCATAGAGAAGGCCTTAAATGACCTGATGGAGCTAAAAACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CAA 90 bp CTCTTCTCCAAAATGCTTGGGATGAAGTGTTTTGGATTTCAGATTTaGGAAGGGTTGCAGAATATATACGAGTTGAGCATCCCTAATCCC +
Preference number: 2 (lower is better)
Translates to: LFSKMLGMKCFGFQI*EGLQNIYELSIPNP
Trigger: GGGATTAGGGATGCTCAACTCGTATATATTCTGCAACCCTTCCAAAATCTGAAATCCAAAACACTTCATCCCAAGCATTTTGGAGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
3UTR-3UTR GCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGCATCACTTAGTGCAATaGTTTCATCAAAATGGATCT +
Preference number: 2 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKHHLVQ*FHQNGS
Trigger: AGATCCATTTTGATGAAAGCATTGCACTAAGTGATG...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR CCA 90 bp AGATTGAAATCACAGAAAGAAACCATCATCTCTAATCCCAAAATGGCCTTTCAGCTATTGTGTAGTCCTTaGGTAGCACTGATCTGTGGC +
Preference number: 2 (lower is better)
Translates to: RLKSQKETIISNPKMAFQLLCSP*VALICG
Trigger: GCCACAGATCAGTGCTACCCAAGGACTACACAATAG...CTGAAAGGCCATTTTGGGATTAGAGATGATGGTTTCTTTCTGTGATTTCAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
3UTR-3UTR TCA 90 bp GGTGACAAAATCTGTCAGCATTTGCTGGTCTGTAAAGGATTGTATTTCTCCTTGTTGATCTTCAGTCACTaGTACCTTTTCTTCCACTTG +
Preference number: 2 (lower is better)
Translates to: GDKICQHLLVCKGLYFSLLIFSH*YLFFHL
Trigger: CAAGTGGAAGAAAAGGTATCAGTGACTGAAGATCAA...CAAGGAGAAATACAATCCTTTACAGACCAGCAAATGCTGACAGATTTTGTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR GCA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATATGCATGTATGGGTATaGTACATAATTAGCGCTTCA +
Preference number: 2 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYMHVWV*YIISAS
Trigger: TGAAGCGCTAATTATGTAGCATACCCATACATGCAT...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR CCA 90 bp GAGAAAGCAATCTATAATTCAAAAAGCATATTGAAAAGTGGCTGTCCCTACCAGGGTAGCACTGATCTGTaGCATGGCATACACTGTAAA +
Preference number: 2 (lower is better)
Translates to: EKAIYNSKSILKSGCPYQGSTDL*HGIHCK
Trigger: TTTACAGTGTATGCCATGCCACAGATCAGTGCTACC...CTGGTAGGGACAGCCACTTTTCAATATGCTTTTTGAATTATAGATTGCTTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
3UTR-3UTR CCA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTCTATATGCGACAACATaGGCAAACCTGAAGGGCATT +
Preference number: 2 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSILYATT*ANLKGI
Trigger: AATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAG...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR CCA 90 bp AAATTCTTTTCTTTAAGAATGTTGAGTATTGGCCCCCACTCTCTTCTGGCTTGTAGCCCAGTATTAAGGTaGAAGTGTCCCAATTTTCCA +
Preference number: 2 (lower is better)
Translates to: KFFSLRMLSIGPHSLLACSPVLR*KCPNFP
Trigger: TGGAAAATTGGGACACTTCCACCTTAATACTGGGCT...ACAAGCCAGAAGAGAGTGGGGGCCAATACTCAACATTCTTAAAGAAAAGAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp AGAATGTTGAGTATTGGCCCCCACTCTCTTCTGGCTTGTATAGTTTCTGCTGAAGTTTTTATCTACCTTTaGTCTTTGATGATGGTGATG +
Preference number: 2 (lower is better)
Translates to: RMLSIGPHSLLACIVSAEVFIYL*SLMMVM
Trigger: CATCACCATCATCAAAGACCAAAGGTAGATAAAAAC...TTCAGCAGAAACTATACAAGCCAGAAGAGAGTGGGGGCCAATACTCAACATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR GCA 90 bp CACAGAAAGAAACCATCATCTCTAATCCCAAAATGGCCTTTCAGTAAGCCCTTCAAAAATACAGAAGCATaGAGCATTTCTTTGAAGGGA +
Preference number: 2 (lower is better)
Translates to: HRKKPSSLIPKWPFSKPFKNTEA*SISLKG
Trigger: TCCCTTCAAAGAAATGCTGCATGCTTCTGTATTTTT...GAAGGGCTTACTGAAAGGCCATTTTGGGATTAGAGATGATGGTTTCTTTCTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676921.1
3UTR-3UTR GCA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATCATCACTTAGTGCAATaGTTTCATCAAAATGGATCT +
Preference number: 2 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYHHLVQ*FHQNGS
Trigger: AGATCCATTTTGATGAAAGCATTGCACTAAGTGATG...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR GCA 90 bp CTAGAATCAATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACCAGTAGACAGAAACAAACGTaGTCCAAATTTTGTTTGCAG +
Preference number: 2 (lower is better)
Translates to: LESMVFTIWHVFAVAGTSRQKQT*SKFCLQ
Trigger: CTGCAAACAAAATTTGGAGCACGTTTGTTTCTGTCT...ACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATTGATTCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CCA 90 bp CTAGAATCAATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACCAGTTCTGTCAGCATTTGCTaGTCTGTAAAGGATTGTATT +
Preference number: 2 (lower is better)
Translates to: LESMVFTIWHVFAVAGTSSVSIC*SVKDCI
Trigger: AATACAATCCTTTACAGACCAGCAAATGCTGACAGA...ACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATTGATTCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR GCA 90 bp GAGAAAGCAATCTATAATTCAAAAAGCATATTGAAAAGTGGCTGTCCCTACCAGCTTAACAACTTCTTGTaGCTGATCCTGCTTTGTGTT +
Preference number: 2 (lower is better)
Translates to: EKAIYNSKSILKSGCPYQLNNFL*LILLCV
Trigger: AACACAAAGCAGGATCAGGCACAAGAAGTTGTTAAG...CTGGTAGGGACAGCCACTTTTCAATATGCTTTTTGAATTATAGATTGCTTTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
3UTR-3UTR CCA 90 bp GATGAATGTTATCAAACCAAGGCAGTGTTGGTACAGTACAGGTTGAATATCTCTTGGGATGAAGTGTTTTaGATTTCAGATTTTGGAAGG +
Preference number: 2 (lower is better)
Translates to: DECYQTKAVLVQYRLNISWDEVF*ISDFGR
Trigger: CCTTCCAAAATCTGAAATCCAAAACACTTCATCCCA...AGAGATATTCAACCTGTACTGTACCAACACTGCCTTGGTTTGATAACATTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
3UTR-3UTR TCA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTGGGCATTATGCTAAGTaGAATAAGTCAATCACAGAA +
Preference number: 2 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSIGHYAK*NKSITE
Trigger: TTCTGTGATTGACTTATTTCACTTAGCATAATGCCC...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR GCA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTACTCTGATAAATGAGTaGACACATGTAAATTTCCAC +
Preference number: 2 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSITLINE*THVNFH
Trigger: GTGGAAATTTACATGTGTGCACTCATTTATCAGAGT...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR TCA 72 bp CAGAGGTGGAGTCTACAGAGGCACACCAGGCCTCCTTaGGCTGCAGTGGGCTCCACCCAGTTCAAGCTTCCC +
Preference number: 3 (lower is better)
Translates to: QRWSLQRHTRPP*AAVGSTQFKLP
Trigger: GGGAAGCTTGAACTGGGTGGAGCCCACTGCAGCTCAAGGAGGCCTGGTGTGCCTCTGTAGACTCCACCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 72 bp GAGGCAATGTCCCACCCTGCTTCAGCTCACACTCTGTaGGCTGCACCCACTGTCCGACAAGCCCCAGTGAGA +
Preference number: 3 (lower is better)
Translates to: EAMSHPASAHTL*AAPTVRQAPVR
Trigger: TCTCACTGGGGCTTGTCGGACAGTGGGTGCAGCCCACAGAGTGTGAGCTGAAGCAGGGTGGGACATTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR GCA 72 bp CTTCCACCTTGCAGTTCGATCTCTGTTAGCTGTGCTTaGAGTGGGGGAGGCTCCATGGACGTGGGACCCTCC +
Preference number: 3 (lower is better)
Translates to: LPPCSSISVSCA*SGGGSMDVGPS
Trigger: GGAGGGTCCCACGTCCATGGAGCCTCCCCCACTGCAAGCACAGCTAACAGAGATCGAACTGCAAGGTGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 72 bp GTCTACAGAGGCACACCAGGCCTCCTTGAGCTGCAGTaGGCTCCACCCAGTTCAAGCTTCCCAGAGGCTTTG +
Preference number: 3 (lower is better)
Translates to: VYRGTPGLLELQ*APPSSSFPEAL
Trigger: CAAAGCCTCTGGGAAGCTTGAACTGGGTGGAGCCCACTGCAGCTCAAGGAGGCCTGGTGTGCCTCTGTAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp CCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTGCCTGGGTATCGCACACCAGGCCTCCTaGAGCTGCAGTGGGCTCCAC +
Preference number: 3 (lower is better)
Translates to: PQLQVCWNLLEVQFCLGIAHQAS*SCSGLH
Trigger: GTGGAGCCCACTGCAGCTCAAGGAGGCCTGGTGTGC...GATACCCAGGCAAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR TCA 72 bp TCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTATaGGATGTCAGTCGGCCCCCTACTGGGAGGTGTTTC +
Preference number: 3 (lower is better)
Translates to: SGSFISEGHPAV*DVSRPPTGRCF
Trigger: GAAACACCTCCCAGTAGGGGGCCGACTGACATCTCATACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 72 bp TTAGCTGTGCTTGCAGTGGGGGAGGCTCCATGGACGTaGGACCCTCCAAGCCACGCATGGGATATAATCTCC +
Preference number: 3 (lower is better)
Translates to: LAVLAVGEAPWT*DPPSHAWDIIS
Trigger: GGAGATTATATCCCATGCGTGGCTTGGAGGGTCCCACGTCCATGGAGCCTCCCCCACTGCAAGCACAGCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR GCA 72 bp CTTCCCTTGGCTAGGAAAGGGAATTCCCCAACCCTTTaGACTTCCCGGGTGAGGCAATGTCCCACCCTGCTT +
Preference number: 3 (lower is better)
Translates to: LPLARKGNSPTL*TSRVRQCPTLL
Trigger: AAGCAGGGTGGGACATTGCCTCACCCGGGAAGTGCAAAGGGTTGGGGAATTCCCTTTCCTAGCCAAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR GCA 72 bp GCAGAAGTTTCTGCTGCCTTTTGTTCAGCTATGCCCTaGCCGCAGAGGTGGAGTCTACAGAGGCACACCAGG +
Preference number: 3 (lower is better)
Translates to: AEVSAAFCSAMP*PQRWSLQRHTR
Trigger: CCTGGTGTGCCTCTGTAGACTCCACCTCTGCGGGCAGGGCATAGCTGAACAAAAGGCAGCAGAAACTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp TGCTGGGAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTGCACACCAGGCCTCCTaGAGCTGCAGTGGGCTCCAC +
Preference number: 3 (lower is better)
Translates to: CWENHYSLQSCQTGTFKSAHQAS*SCSGLH
Trigger: GTGGAGCCCACTGCAGCTCAAGGAGGCCTGGTGTGC...AGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTCCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp TTGCTGCCTGATCGTTCCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTAAGTTTCTGCTGCCTTTaGTTCAGCTATGCCCTGCCC +
Preference number: 3 (lower is better)
Translates to: LLPDRSSGSFISEGHPAVSFCCL*FSYALP
Trigger: GGGCAGGGCATAGCTGAACAAAAGGCAGCAGAAACT...TACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGGAACGATCAGGCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR GCA 72 bp GACTTGCTGAGTCATCTGGCCTTCATCTTTCTCCTGTaGTGGGTGCTTCCTGCCCTCAAACACTGGACTCCA +
Preference number: 3 (lower is better)
Translates to: DLLSHLAFIFLL*WVLPALKHWTP
Trigger: TGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAAGGCCAGATGACTCAGCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR GCA 72 bp AGTCTGCAGAAGTTTCTGCTGCCTTTTGTTCAGCTATaGCCTGCCCGCAGAGGTGGAGTCTACAGAGGCACA +
Preference number: 3 (lower is better)
Translates to: SLQKFLLPFVQL*PARRGGVYRGT
Trigger: TGTGCCTCTGTAGACTCCACCTCTGCGGGCAGGGCATAGCTGAACAAAAGGCAGCAGAAACTTCTGCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp CCCCCATGTTCTTCTCTCCTCCCCTCCAGGTACGATGATGACCTGACCTGGAACTGTCCGTCCTTTCTATaGTGTAGTCCTTGGGTAGCA +
Preference number: 3 (lower is better)
Translates to: PPCSSLLPSRYDDDLTWNCPSFL*CSPWVA
Trigger: TGCTACCCAAGGACTACACAATAGAAAGGACGGACA...GTTCCAGGTCAGGTCATCATCGTACCTGGAGGGGAGGAGAGAAGAACATGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
3UTR-3UTR CAA 90 bp GAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGAGATGTCAGTCGGCCCCCTATGCTTCTATGCCTTTTaGTTTCTTCCAAGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: EASSQRGTRLYEMSVGPLCFYAF*FLPSCR
Trigger: CCTGCAGCTTGGAAGAAACAAAAAGGCATAGAAGCA...TAGGGGGCCGACTGACATCTCATACAGCCGGGTGCCCCTCTGAGATGAAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 72 bp TTGCTGAGTCATCTGGCCTTCATCTTTCTCCTGTGCTaGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGT +
Preference number: 3 (lower is better)
Translates to: LLSHLAFIFLLC*VLPALKHWTPS
Trigger: ACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAAGGCCAGATGACTCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR CCA 72 bp GAAAGATCCGCTGTTAGTCTGATGGGCTTCCCTTTGTaGGTAACCCCACCTTTCTCTCTGGCTGCCCTTAAC +
Preference number: 3 (lower is better)
Translates to: ERSAVSLMGFPL*VTPPFSLAALN
Trigger: GTTAAGGGCAGCCAGAGAGAAAGGTGGGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGCGGATCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp TTCATCTTTCTCCTGTGCTGGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGTAGGGCGGCAATCTCCTaGGCCTTGTTGCTCTATATC +
Preference number: 3 (lower is better)
Translates to: FIFLLCWVLPALKHWTPSRAAIS*ALLLYI
Trigger: GATATAGAGCAACAAGGCCAAGGAGATTGCCGCCCT...ACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR CAA 90 bp CTTCCTTGCTCCTCAGCTTGCAGACGGTCTATTGTGAGACTTCACCTTGTGATTGTAAGGAAGTCTAAGTaGGGGAGACGCAGGGGGTGC +
Preference number: 3 (lower is better)
Translates to: LPCSSACRRSIVRLHLVIVRKSK*GRRRGC
Trigger: GCACCCCCTGCGTCTCCCCAACTTAGACTTCCTTAC...AATCACAAGGTGAAGTCTCACAATAGACCGTCTGCAAGCTGAGGAGCAAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR CAA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTGGGGGAAATGGAGAGTaGCTGTTCCGTGGGTATAGT +
Preference number: 3 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFGGNGE*LFRGYS
Trigger: ACTATACCCACGGAACAGCAACTCTCCATTTCCCCC...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR CAA 90 bp TGCCTGATCGTTCCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGAGAGCACCATTTGGGGTTaGATTGCTTCTATGCCTTTT +
Preference number: 3 (lower is better)
Translates to: CLIVPLEASSQRGTRLYESTIWG*IASMPF
Trigger: AAAAGGCATAGAAGCAATCAAACCCCAAATGGTGCT...CTCATACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGGAACGATCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp ACAGTCAGAACCCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTAAAAGGGGCATCTTGTaGGAGGACAGTGGTTGGGCC +
Preference number: 3 (lower is better)
Translates to: TVRTLSCRSVGICWKSSFKRGIL*EDSGWA
Trigger: GGCCCAACCACTGTCCTCCAACAAGATGCCCCTTTT...AAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGGGTTCTGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp CTAACAGTCAGAACCCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTAGTTTCTGCTGCCTTTaGTTCAGCTATGCCCTGCCC +
Preference number: 3 (lower is better)
Translates to: LTVRTLSCRSVGICWKSSSFCCL*FSYALP
Trigger: GGGCAGGGCATAGCTGAACAAAAGGCAGCAGAAACT...ACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGGGTTCTGACTGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR TCA 72 bp CTCCCATCTCCTCCAACCAGCCACAAGATGCAACAATaGCATGGCGAGAGAGAATTCTGTAAGGGCGGCAAT +
Preference number: 3 (lower is better)
Translates to: LPSPPTSHKMQQ*HGEREFCKGGN
Trigger: ATTGCCGCCCTTACAGAATTCTCTCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTGGAGGAGATGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR TCA 72 bp TTTGCAGTGGCTGGTACCAGTTGTTCCTTTCCATGTTaGGTGCTTCCTTCAGGAGCTCTTGTAAGGCAGGCC +
Preference number: 3 (lower is better)
Translates to: FAVAGTSCSFPC*VLPSGALVRQA
Trigger: GGCCTGCCTTACAAGAGCTCCTGAAGGAAGCACTCAACATGGAAAGGAACAACTGGTACCAGCCACTGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR GCA 72 bp TCTGGCCTTCATCTTTCTCCTGTGCTGGGTGCTTCCTaGCCTCAAACACTGGACTCCAAGTTCTTCAGCTTT +
Preference number: 3 (lower is better)
Translates to: SGLHLSPVLGAS*PQTLDSKFFSF
Trigger: AAAGCTGAAGAACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAAGGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR GCA 72 bp GGAGGCGGTCTGTCCGTTCTCAGATATCAAACTCCATaGTGGGAGAACCACTACTCTCTTCAAAGCTGTCAG +
Preference number: 3 (lower is better)
Translates to: GGGLSVLRYQTP*WENHYSLQSCQ
Trigger: CTGACAGCTTTGAAGAGAGTAGTGGTTCTCCCAGCATGGAGTTTGATATCTGAGAACGGACAGACCGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR GCA 72 bp CTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTaGCTGGGTATCACCAGTGGAGGTGGCAGAACAGTA +
Preference number: 3 (lower is better)
Translates to: LQVCWNLLEVQF*LGITSGGGRTV
Trigger: TACTGTTCTGCCACCTCCACTGGTGATACCCAGGCAAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 72 bp AGCCTCCCCTGTGGCCAGTATGAACATGTGACTAAGTaGTCACCAATGGAATGTGAGCCGACATTAAGGACC +
Preference number: 3 (lower is better)
Translates to: SLPCGQYEHVTK*SPMECEPTLRT
Trigger: GGTCCTTAATGTCGGCTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTGGCCACAGGGGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
3UTR CCA 72 bp GTGGAAGTGTCCCAATTTTCCAGGTACTGTCTGTCATaGCTTCCCTTGGCTAGGAAAGGGAATTCCCCAACC +
Preference number: 3 (lower is better)
Translates to: VEVSQFSRYCLS*LPLARKGNSPT
Trigger: GGTTGGGGAATTCCCTTTCCTAGCCAAGGGAAGCCATGACAGACAGTACCTGGAAAATTGGGACACTTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTACTTACACTAGTGATTaGCCAAGGGCTCTCAGGCCT +
Preference number: 3 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFTYTSD*PRALRP
Trigger: AGGCCTGAGAGCCCTTGGCAAATCACTAGTGTAAGT...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR TCA 72 bp CATTTCTCAGCCTCCCCTGTGGCCAGTATGAACATGTaGCTAAGTGGTCACCAATGGAATGTGAGCCGACAT +
Preference number: 3 (lower is better)
Translates to: HFSASPVASMNM*LSGHQWNVSRH
Trigger: ATGTCGGCTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTGGCCACAGGGGAGGCTGAGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
3UTR TCA 72 bp GTGTCTGTGAGGGTGTTGCCAAAGGAGATTCACATTTaGGTCAGTGAACTGGGAGAGACAGACCCATCCTCA +
Preference number: 3 (lower is better)
Translates to: VSVRVLPKEIHI*VSELGETDPSS
Trigger: TGAGGATGGGTCTGTCTCTCCCAGTTCACTGACTCAAATGTGAATCTCCTTTGGCAACACCCTCACAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR GCA 72 bp CTACTTTTGAGGTACTGGGACTCTGACTGGCTTCCTTaGTCCTCAGCTTGCAGACGGTCTATTGTGAGACTT +
Preference number: 3 (lower is better)
Translates to: LLLRYWDSDWLP*SSACRRSIVRL
Trigger: AAGTCTCACAATAGACCGTCTGCAAGCTGAGGAGCAAGGAAGCCAGTCAGAGTCCCAGTACCTCAAAAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR CCA 72 bp CCCAATTTTCCAGGTACTGTCTGTCATGGCTTCCCTTaGCTAGGAAAGGGAATTCCCCAACCCTTTGCACTT +
Preference number: 3 (lower is better)
Translates to: PNFPGTVCHGFP*LGKGIPQPFAL
Trigger: AAGTGCAAAGGGTTGGGGAATTCCCTTTCCTAGCCAAGGGAAGCCATGACAGACAGTACCTGGAAAATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 72 bp GGCGGTCTGTCCGTTCTCAGATATCAAACTCCATGCTaGGAGAACCACTACTCTCTTCAAAGCTGTCAGACA +
Preference number: 3 (lower is better)
Translates to: GGLSVLRYQTPC*ENHYSLQSCQT
Trigger: TGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTCCCAGCATGGAGTTTGATATCTGAGAACGGACAGACCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 72 bp CCTTCTAACAGTCAGAACCCTCAGCTGCAGGTCTGTTaGAATTTGCTGGAAGTCCAGTTTTGCCTGGGTATC +
Preference number: 3 (lower is better)
Translates to: PSNSQNPQLQVC*NLLEVQFCLGI
Trigger: GATACCCAGGCAAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGGGTTCTGACTGTTAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp CTTCTTGTGCCTGATCCTGCTTTGTGTTCCAGTAAGGAGGGTGAGAAAGGTCACTGTCCGTCCTTTCTATaGTGTAGTCCTTGGGTAGCA +
Preference number: 3 (lower is better)
Translates to: LLVPDPALCSSKEGEKGHCPSFL*CSPWVA
Trigger: TGCTACCCAAGGACTACACAATAGAAAGGACGGACA...GTGACCTTTCTCACCCTCCTTACTGGAACACAAAGCAGGATCAGGCACAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
3UTR-3UTR CAA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGAGGGCGGCAATCTCCTaGGCCTTGTTGCTCTATATC +
Preference number: 3 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKRAAIS*ALLLYI
Trigger: GATATAGAGCAACAAGGCCAAGGAGATTGCCGCCCT...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR CAA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGTAAGGAAGTCTAAGTaGGGGAGACGCAGGGGGTGC +
Preference number: 3 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYVRKSK*GRRRGC
Trigger: GCACCCCCTGCGTCTCCCCAACTTAGACTTCCTTAC...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR CAA 90 bp TTCATCTTTCTCCTGTGCTGGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGTAAATGTGGCAGACACTaGACTCTAGGGCAACATGAA +
Preference number: 3 (lower is better)
Translates to: FIFLLCWVLPALKHWTPSKCGRH*TLGQHE
Trigger: TTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTT...ACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR CAA 90 bp CCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTGCCTGGGTATCTGTCTGCAGCACCATTaGGGGTTTGATTGCTTCTAT +
Preference number: 3 (lower is better)
Translates to: PQLQVCWNLLEVQFCLGICLQHH*GFDCFY
Trigger: ATAGAAGCAATCAAACCCCAAATGGTGCTGCAGACA...GATACCCAGGCAAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp TCTATCCAACTTTGTTCTGTTGCTGGCGAGGAGCTGCATTCCTTTGGAGGAGGAAGCTTCCCAGAGGCTTaGTTTACTTACTCAAGCCTC +
Preference number: 3 (lower is better)
Translates to: SIQLCSVAGEELHSFGGGSFPEA*FTYSSL
Trigger: GAGGCTTGAGTAAGTAAACAAAGCCTCTGGGAAGCT...TCCTCCTCCAAAGGAATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGGATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp AGAATGTTGAGTATTGGCCCCCACTCTCTTCTGGCTTGTATAGTTTCTGCTGAAGAATGTTGGCCTGCCTaGCTAGGCTGGGGAAGTTCT +
Preference number: 3 (lower is better)
Translates to: RMLSIGPHSLLACIVSAEECWPA*LGWGSS
Trigger: AGAACTTCCCCAGCCTAGCAAGGCAGGCCAACATTC...TTCAGCAGAAACTATACAAGCCAGAAGAGAGTGGGGGCCAATACTCAACATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR GCA 72 bp CTCGTCAAAGTCATTCTCTATCCAACTTTGTTCTGTTaGTGGCGAGGAGCTGCATTCCTTTGGAGGAGGAGA +
Preference number: 3 (lower is better)
Translates to: LVKVILYPTLFC*WRGAAFLWRRR
Trigger: TCTCCTCCTCCAAAGGAATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGGATAGAGAATGACTTTGACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 72 bp GTCAAAGTCATTCTCTATCCAACTTTGTTCTGTTGCTaGCGAGGAGCTGCATTCCTTTGGAGGAGGAGAGAG +
Preference number: 3 (lower is better)
Translates to: VKVILYPTLFCC*RGAAFLWRRRE
Trigger: CTCTCTCCTCCTCCAAAGGAATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGGATAGAGAATGACTTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp GGCTCCACCCAGTTCAAGCTTCCCAGAGGCTTTGTTTACTTACTCAAGCCTCAGCATCTGCTAAGACCATaGGAAAAGCCCAGTATTAAG +
Preference number: 3 (lower is better)
Translates to: GSTQFKLPRGFVYLLKPQHLLRP*EKPSIK
Trigger: CTTAATACTGGGCTTTTCCAATGGTCTTAGCAGATG...CTGAGGCTTGAGTAAGTAAACAAAGCCTCTGGGAAGCTTGAACTGGGTGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp TGTAAGGCAGGCCTGTTGGTGACAAAATCTGTCAGCATTTGCTGGTCTGTAAAGTTGGAGTTGCTCTTCTaGAGGAGTATCTCTGTGGCG +
Preference number: 3 (lower is better)
Translates to: CKAGLLVTKSVSICWSVKLELLF*RSISVA
Trigger: CGCCACAGAGATACTCCTCAAGAAGAGCAACTCCAA...CTTTACAGACCAGCAAATGCTGACAGATTTTGTCACCAACAGGCCTGCCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTATCTCCTTGGCCTTGTaGCTCTATATCCCTAATAAC +
Preference number: 3 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFISLAL*LYIPNN
Trigger: GTTATTAGGGATATAGAGCAACAAGGCCAAGGAGAT...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR-3UTR CAA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATAAAGTAGGATGGAGGTaGCCAGGGTTTAGGGGAAGG +
Preference number: 3 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYKVGWR*PGFRGR
Trigger: CCTTCCCCTAAACCCTGGCAACCTCCATCCTACTTT...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR CAA 90 bp TGCTGGGAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTTGTCTGCAGCACCATTaGGGGTTTGATTGCTTCTAT +
Preference number: 3 (lower is better)
Translates to: CWENHYSLQSCQTGTFKSCLQHH*GFDCFY
Trigger: ATAGAAGCAATCAAACCCCAAATGGTGCTGCAGACA...AGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTCCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp ACAGTCAGAACCCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTAACCCAATACCTCAGTaGGAAATGCAGAAATCACCC +
Preference number: 3 (lower is better)
Translates to: TVRTLSCRSVGICWKSSFNPIPQ*EMQKSP
Trigger: GGGTGATTTCTGCATTTCCAACTGAGGTATTGGGTT...AAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGGGTTCTGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGGCAATCTCCTTGGCCTaGTTGCTCTATATCCCTAAT +
Preference number: 3 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKAISLA*LLYIPN
Trigger: ATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGC...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR CAA 90 bp ATCTGTCAGCATTTGCTGGTCTGTAAAGGATTGTATTTCTCCTTGACTTATGAAGTTGGAGGACAGTGGTaGGGCCTCCTCTTGAGGTCA +
Preference number: 3 (lower is better)
Translates to: ICQHLLVCKGLYFSLTYEVGGQW*GLLLRS
Trigger: TGACCTCAAGAGGAGGCCCAACCACTGTCCTCCAAC...TTCATAAGTCAAGGAGAAATACAATCCTTTACAGACCAGCAAATGCTGACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp CTAGAATCAATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACCAGTAGGAGCTGCATTCCTTaGGAGGAGGAGAGAGAGACT +
Preference number: 3 (lower is better)
Translates to: LESMVFTIWHVFAVAGTSRSCIP*EEERET
Trigger: AGTCTCTCTCTCCTCCTCCAAAGGAATGCAGCTCCT...ACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATTGATTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp AAATTCTTTTCTTTAAGAATGTTGAGTATTGGCCCCCACTCTCTTCTGGCTTGTGAATGTTGGCCTGCCTaGCTAGGCTGGGGAAGTTCT +
Preference number: 3 (lower is better)
Translates to: KFFSLRMLSIGPHSLLACECWPA*LGWGSS
Trigger: AGAACTTCCCCAGCCTAGCAAGGCAGGCCAACATTC...ACAAGCCAGAAGAGAGTGGGGGCCAATACTCAACATTCTTAAAGAAAAGAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 72 bp CAAGAAAACTGTCCGTCCTTTCTATTGTGTAGTCCTTaGGTAGCACTGATCTGTGGCATGGCATACACTGTA +
Preference number: 3 (lower is better)
Translates to: QENCPSFLLCSP*VALICGMAYTV
Trigger: TACAGTGTATGCCATGCCACAGATCAGTGCTACCCAAGGACTACACAATAGAAAGGACGGACAGTTTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
3UTR-3UTR CAA 90 bp CACAGAAAGAAACCATCATCTCTAATCCCAAAATGGCCTTTCAGTAAGCCCTTCGCCCTTAACAACTTCTaGTGCCTGATCCTGCTTTGT +
Preference number: 3 (lower is better)
Translates to: HRKKPSSLIPKWPFSKPFALNNF*CLILLC
Trigger: ACAAAGCAGGATCAGGCACAAGAAGTTGTTAAGGGC...GAAGGGCTTACTGAAAGGCCATTTTGGGATTAGAGATGATGGTTTCTTTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
3UTR-3UTR CAA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGTCAACAACACTCACATaGATAGCACTATCTCTGGAC +
Preference number: 3 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKSTTLT*IALSLD
Trigger: GTCCAGAGATAGTGCTATCAATGTGAGTGTTGTTGA...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR CAA 90 bp ACAGTCAGAACCCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTTGCTCCAAATTTTGTTaGCAGGAGTATACCTTACTC +
Preference number: 3 (lower is better)
Translates to: TVRTLSCRSVGICWKSSFCSKFC*QEYTLL
Trigger: GAGTAAGGTATACTCCTGCAAACAAAATTTGGAGCA...AAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGGGTTCTGACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp CTCCTGGATAATATCCTGAAGAGTGTTTTCCAGCTTGGTTCCATTCTCCCCGTCTGCTCCAAATTTTGTTaGCAGGAGTATACCTTACTC +
Preference number: 3 (lower is better)
Translates to: LLDNILKSVFQLGSILPVCSKFC*QEYTLL
Trigger: GAGTAAGGTATACTCCTGCAAACAAAATTTGGAGCA...GACGGGGAGAATGGAACCAAGCTGGAAAACACTCTTCAGGATATTATCCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp CTCCTGGATAATATCCTGAAGAGTGTTTTCCAGCTTGGTTCCATTCTCCCCGTCAACGTGCTCCAAATTTaGTTTGCAGGAGTATACCTT +
Preference number: 3 (lower is better)
Translates to: LLDNILKSVFQLGSILPVNVLQI*FAGVYL
Trigger: AAGGTATACTCCTGCAAACAAAATTTGGAGCACGTT...GACGGGGAGAATGGAACCAAGCTGGAAAACACTCTTCAGGATATTATCCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp ATGGTTTTTAGCTCCATCAGGTCATTTAAGGCCTTCTCTATGCTGTTTATTCTAAAAAGGGGCATCTTGTaGGAGGACAGTGGTTGGGCC +
Preference number: 3 (lower is better)
Translates to: MVFSSIRSFKAFSMLFILKRGIL*EDSGWA
Trigger: GGCCCAACCACTGTCCTCCAACAAGATGCCCCTTTT...TAGAATAAACAGCATAGAGAAGGCCTTAAATGACCTGATGGAGCTAAAAACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp ACACCCTTCTTTAGCTTGGAGAAGTTTGTTATTACCGATTATCTGAAGCCTTCTCTGTCATGGCTTCCCTaGGCTAGGAAAGGGAATTCC +
Preference number: 3 (lower is better)
Translates to: TPFFSLEKFVITDYLKPSLSWLP*ARKGNS
Trigger: GGAATTCCCTTTCCTAGCCAAGGGAAGCCATGACAG...AGAAGGCTTCAGATAATCGGTAATAACAAACTTCTCCAAGCTAAAGAAGGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp CCACCATATATGGGGTCTCAACTTGATTTATACTGCTATTTGATAGATTCCAGAGTGCCTGATCCTGCTTaGTGTTCCAGTAAGGAGGGT +
Preference number: 3 (lower is better)
Translates to: PPYMGSQLDLYCYLIDSRVPDPA*CSSKEG
Trigger: ACCCTCCTTACTGGAACACAAAGCAGGATCAGGCAC...TCTGGAATCTATCAAATAGCAGTATAAATCAAGTTGAGACCCCATATATGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
3UTR-3UTR CAA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTAAAGTAGGATGGAGGTaGCCAGGGTTTAGGGGAAGG +
Preference number: 3 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSIKVGWR*PGFRGR
Trigger: CCTTCCCCTAAACCCTGGCAACCTCCATCCTACTTT...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR CAA 90 bp TCGTCAAAGTCATTCTCTATCCAACTTTGTTCTGTTGCTGGCGAGGAGCTGCATAACGTGCTCCAAATTTaGTTTGCAGGAGTATACCTT +
Preference number: 3 (lower is better)
Translates to: SSKSFSIQLCSVAGEELHNVLQI*FAGVYL
Trigger: AAGGTATACTCCTGCAAACAAAATTTGGAGCACGTT...ATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGGATAGAGAATGACTTTGACGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp CTAAGACCATTGGAAAAGCCCAGTATTAAGGTGGAAGTGTCCCAATTTTCCAGGAGCACCATTTGGGGTTaGATTGCTTCTATGCCTTTT +
Preference number: 3 (lower is better)
Translates to: LRPLEKPSIKVEVSQFSRSTIWG*IASMPF
Trigger: AAAAGGCATAGAAGCAATCAAACCCCAAATGGTGCT...CCTGGAAAATTGGGACACTTCCACCTTAATACTGGGCTTTTCCAATGGTCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp GGTGACAAAATCTGTCAGCATTTGCTGGTCTGTAAAGGATTGTATTTCTCCTTGCTGTATGTCCTGAATTaGAATGTTGGCCTGCCTTGC +
Preference number: 3 (lower is better)
Translates to: GDKICQHLLVCKGLYFSLLYVLN*NVGLPC
Trigger: GCAAGGCAGGCCAACATTCAAATTCAGGACATACAG...CAAGGAGAAATACAATCCTTTACAGACCAGCAAATGCTGACAGATTTTGTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR TCA 72 bp GAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTTaGGGAGTATCTCTGTGGCGTTTTCTGTATGTCCTG +
Preference number: 3 (lower is better)
Translates to: ESDNYVSWSCSS*GVSLWRFLYVL
Trigger: CAGGACATACAGAAAACGCCACAGAGATACTCCTCAAGAAGAGCAACTCCAAGACACATAATTGTCAGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 72 bp AATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTaGTACCAGTTGTTCCTTTCCATGTTGAGTGCTTCC +
Preference number: 3 (lower is better)
Translates to: NGLYNLACFCSG*YQLFLSMLSAS
Trigger: GGAAGCACTCAACATGGAAAGGAACAACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp GATGAATGTTATCAAACCAAGGCAGTGTTGGTACAGTACAGGTTGAATATCTCTTGTCCGTCCTTTCTATaGTGTAGTCCTTGGGTAGCA +
Preference number: 3 (lower is better)
Translates to: DECYQTKAVLVQYRLNISCPSFL*CSPWVA
Trigger: TGCTACCCAAGGACTACACAATAGAAAGGACGGACA...AGAGATATTCAACCTGTACTGTACCAACACTGCCTTGGTTTGATAACATTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
3UTR-3UTR CAA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATTCAACAACACTCACATaGATAGCACTATCTCTGGAC +
Preference number: 3 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYSTTLT*IALSLD
Trigger: GTCCAGAGATAGTGCTATCAATGTGAGTGTTGTTGA...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR CAA 90 bp AAATTCTTTTCTTTAAGAATGTTGAGTATTGGCCCCCACTCTCTTCTGGCTTGTAGCTTCCCAGAGGCTTaGTTTACTTACTCAAGCCTC +
Preference number: 3 (lower is better)
Translates to: KFFSLRMLSIGPHSLLACSFPEA*FTYSSL
Trigger: GAGGCTTGAGTAAGTAAACAAAGCCTCTGGGAAGCT...ACAAGCCAGAAGAGAGTGGGGGCCAATACTCAACATTCTTAAAGAAAAGAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp AGAATCAATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACCAGTTGATTCTCTATCCAACTTaGTTCTGTTGCTGGCGAGGA +
Preference number: 3 (lower is better)
Translates to: RINGLYNLACFCSGWYQLILYPT*FCCWRG
Trigger: TCCTCGCCAGCAACAGAACAAAGTTGGATAGAGAAT...CAACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATTGATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR TCA 72 bp GTTATCAAACCAAGGCAGTGTTGGTACAGTACAGGTTaGATATCTCTTCTCCAAAATGCTTGGGATGAAGTG +
Preference number: 3 (lower is better)
Translates to: VIKPRQCWYSTG*ISLLQNAWDEV
Trigger: CACTTCATCCCAAGCATTTTGGAGAAGAGATATTCAACCTGTACTGTACCAACACTGCCTTGGTTTGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
3UTR TCA 72 bp TTGTTCTTTACTCTCAAGAAAGTGGGATCATGTTTCTaGCCTTTGATACAGCACCCCACATCACTTAGTGCA +
Preference number: 3 (lower is better)
Translates to: LFFTLKKVGSCF*PLIQHPTSLSA
Trigger: TGCACTAAGTGATGTGGGGTGCTGTATCAAAGGTCAGAAACATGATCCCACTTTCTTGAGAGTAAAGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR GCA 72 bp GCTATGATGGTTAATATTGTCAACTTGATTGAAGGATaGAAAGTATCATTCCTGGGTGTGTCTGTGAGGGTG +
Preference number: 3 (lower is better)
Translates to: AMMVNIVNLIEG*KVSFLGVSVRV
Trigger: CACCCTCACAGACACACCCAGGAATGATACTTTGCATCCTTCAATCAAGTTGACAATATTAACCATCATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR GCA 72 bp TTATTAGTTTTCCTTCTAACAGTCAGAACCCTCAGCTaGAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTT +
Preference number: 3 (lower is better)
Translates to: LLVFLLTVRTLS*RSVGICWKSSF
Trigger: AAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGGGTTCTGACTGTTAGAAGGAAAACTAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR GCA 72 bp CCTAGAATCAATGGTCTTTACAATTTGGCATGTTTTTaGAGTGGCTGGTACCAGTTGTTCCTTTCCATGTTG +
Preference number: 3 (lower is better)
Translates to: PRINGLYNLACF*SGWYQLFLSML
Trigger: CAACATGGAAAGGAACAACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATTGATTCTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 72 bp TCTACAGACATAAACTTAACTGCCGTTAGGGGGTATTaGATGACGATTCTTTCTGGCTACTTCCTGCTAAAA +
Preference number: 3 (lower is better)
Translates to: STDINLTAVRGY*MTILSGYFLLK
Trigger: TTTTAGCAGGAAGTAGCCAGAAAGAATCGTCATCCAATACCCCCTAACGGCAGTTAAGTTTATGTCTGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 72 bp AATCAATGGTCTTTACAATTTGGCATGTTTTTGCAGTaGCTGGTACCAGTTGTTCCTTTCCATGTTGAGTGC +
Preference number: 3 (lower is better)
Translates to: NQWSLQFGMFLQ*LVPVVPFHVEC
Trigger: GCACTCAACATGGAAAGGAACAACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp TTGGTGACAAAATCTGTCAGCATTTGCTGGTCTGTAAAGGATTGTATTTCTCCTTGCTTCTATGCCTTTTaGTTTCTTCCAAGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: LVTKSVSICWSVKDCISPCFYAF*FLPSCR
Trigger: CCTGCAGCTTGGAAGAAACAAAAAGGCATAGAAGCA...AGGAGAAATACAATCCTTTACAGACCAGCAAATGCTGACAGATTTTGTCACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR-3UTR CAA 90 bp CACAGAAAGAAACCATCATCTCTAATCCCAAAATGGCCTTTCAGTAAGCCCTTCTTGGTACAGTACAGGTaGAATATCTCTTCTCCAAAA +
Preference number: 3 (lower is better)
Translates to: HRKKPSSLIPKWPFSKPFLVQYR*NISSPK
Trigger: TTTTGGAGAAGAGATATTCAACCTGTACTGTACCAA...GAAGGGCTTACTGAAAGGCCATTTTGGGATTAGAGATGATGGTTTCTTTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
3UTR-3UTR CAA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTGCAATCTCCTTGGCCTaGTTGCTCTATATCCCTAAT +
Preference number: 3 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSIAISLA*LLYIPN
Trigger: ATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGC...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR CAA 90 bp AGAATCAATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACCAGTTGATCTACCTTTGGTCTTaGATGATGGTGATGTACAGA +
Preference number: 3 (lower is better)
Translates to: RINGLYNLACFCSGWYQLIYLWS*MMVMYR
Trigger: TCTGTACATCACCATCATCAAAGACCAAAGGTAGAT...CAACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATTGATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 72 bp AATTATTTGTGTATACATCTCTCTTCCGTACTTAATTaGACCATGTCTAACTTGCCTGTATCCTCCCCACTG +
Preference number: 3 (lower is better)
Translates to: NYLCIHLSSVLN*TMSNLPVSSPL
Trigger: CAGTGGGGAGGATACAGGCAAGTTAGACATGGTCCAATTAAGTACGGAAGAGAGATGTATACACAAATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR CAA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTATCTCCTTGGCCTTGTaGCTCTATATCCCTAATAAC +
Preference number: 3 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSIISLAL*LYIPNN
Trigger: GTTATTAGGGATATAGAGCAACAAGGCCAAGGAGAT...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR-3UTR CAA 90 bp GATGAATGTTATCAAACCAAGGCAGTGTTGGTACAGTACAGGTTGAATATCTCTAATTCAAAAAGCATATaGAAAAGTGGCTGTCCCTAC +
Preference number: 3 (lower is better)
Translates to: DECYQTKAVLVQYRLNISNSKSI*KSGCPY
Trigger: GTAGGGACAGCCACTTTTCAATATGCTTTTTGAATT...AGAGATATTCAACCTGTACTGTACCAACACTGCCTTGGTTTGATAACATTCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
3UTR TCA 72 bp TTCAGATTTTGGAAGGGTTGCAGAATATATACGAGTTaGGCATCCCTAATCCCCAAATCTGAAATCCATAAT +
Preference number: 3 (lower is better)
Translates to: FRFWKGCRIYTS*ASLIPKSEIHN
Trigger: ATTATGGATTTCAGATTTGGGGATTAGGGATGCTCAACTCGTATATATTCTGCAACCCTTCCAAAATCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
3UTR TCA 72 bp TTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTaGCATAGTCCCATATTTCTTCGAGACTTTGTTCAT +
Preference number: 3 (lower is better)
Translates to: FQVHQSDVDLVF*HSPIFLRDFVH
Trigger: ATGAACAAAGTCTCGAAGAAATATGGGACTATGTCAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CCA 72 bp TCAATTTGGGAGTTTAATATAAGCCTGCACGCATCCTaGATATACTTTCATGATGTCAGTGAACAAAAGTAC +
Preference number: 3 (lower is better)
Translates to: SIWEFNISLHAS*IYFHDVSEQKY
Trigger: GTACTTTTGTTCACTGACATCATGAAAGTATATCCAGGATGCGTGCAGGCTTATATTAAACTCCCAAATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
3UTR TCA 72 bp AATCACAGAAGGACAAATACCCCATGTCCACTTATATaGGCTATCTATAAAGTCAAACTCATAGAAGCAGAA +
Preference number: 3 (lower is better)
Translates to: NHRRTNTPCPLI*AIYKVKLIEAE
Trigger: TTCTGCTTCTATGAGTTTGACTTTATAGATAGCTCATATAAGTGGACATGGGGTATTTGTCCTTCTGTGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
3UTR TCA 72 bp TCTTTAGCTTGGAGAAGTTTGTTATTACCGATTATCTaGAGCCTTCTTCTCTTAACTCGTCAAAGTCATTCT +
Preference number: 3 (lower is better)
Translates to: SLAWRSLLLPII*SLLLLTRQSHS
Trigger: AGAATGACTTTGACGAGTTAAGAGAAGAAGGCTTCAGATAATCGGTAATAACAAACTTCTCCAAGCTAAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp CCCCCATGTTCTTCTCTCCTCCCCTCCAGGTACGATGATGACCTGACCTGGAACACCAGGGTAGCGGTTTaGCCGACACCGCTCCGGGCG +
Preference number: 4 (lower is better)
Translates to: PPCSSLLPSRYDDDLTWNTRVAV*PTPLRA
Trigger: CGCCCGGAGCGGTGTCGGGCAAACCGCTACCCTGGT...GTTCCAGGTCAGGTCATCATCGTACCTGGAGGGGAGGAGAGAAGAACATGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678950.1
CDS-3UTR TCA 90 bp TGCCTGATCGTTCCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGAGCACACCAGGCCTCCTTaGGCTGCAGTGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: CLIVPLEASSQRGTRLYEHTRPP*AAVGST
Trigger: GGTGGAGCCCACTGCAGCTCAAGGAGGCCTGGTGTG...CTCATACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGGAACGATCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CAA 72 bp GCAGAGGTGGAGTCTACAGAGGCACACCAGGCCTCCTaGAGCTGCAGTGGGCTCCACCCAGTTCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: AEVESTEAHQAS*SCSGLHPVQAS
Trigger: GGAAGCTTGAACTGGGTGGAGCCCACTGCAGCTCAAGGAGGCCTGGTGTGCCTCTGTAGACTCCACCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp CTGCCTTTTGTTCAGCTATGCCCTGCCCGCAGAGGTGGAGTCTACAGAGGCACAGATCCGCTGTTAGTCTaGTGGGCTTCCCTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: LPFVQLCPARRGGVYRGTDPLLV*WASLCG
Trigger: CCCACAAAGGGAAGCCCATCAGACTAACAGCGGATC...TGTGCCTCTGTAGACTCCACCTCTGCGGGCAGGGCATAGCTGAACAAAAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp GAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGAGATGTCAGTCGGCCCCCTATCACAGGTAGGAGGCTaGGCCACAAAAGGGATACAG +
Preference number: 4 (lower is better)
Translates to: EASSQRGTRLYEMSVGPLSQVGG*ATKGIQ
Trigger: CTGTATCCCTTTTGTGGCCCAGCCTCCTACCTGTGA...TAGGGGGCCGACTGACATCTCATACAGCCGGGTGCCCCTCTGAGATGAAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp GAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGAGATGTCAGTCGGCCCCCTATGGTGTGTCCATGTGTaGCTCTGTCTGCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: EASSQRGTRLYEMSVGPLWCVHV*LCLQHH
Trigger: ATGGTGCTGCAGACAGAGCCACACATGGACACACCA...TAGGGGGCCGACTGACATCTCATACAGCCGGGTGCCCCTCTGAGATGAAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp CCCCCATGTTCTTCTCTCCTCCCCTCCAGGTACGATGATGACCTGACCTGGAACAGCCTTGGGGAAACATaGTGCCCCCATGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PPCSSLLPSRYDDDLTWNSLGET*CPHVLL
Trigger: GAGAAGAACATGGGGGCAGCATGTTTCCCCAAGGCT...GTTCCAGGTCAGGTCATCATCGTACCTGGAGGGGAGGAGAGAAGAACATGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR CCA 90 bp TGCCTGATCGTTCCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGAGTCACAGGTAGGAGGCTaGGCCACAAAAGGGATACAG +
Preference number: 4 (lower is better)
Translates to: CLIVPLEASSQRGTRLYESQVGG*ATKGIQ
Trigger: CTGTATCCCTTTTGTGGCCCAGCCTCCTACCTGTGA...CTCATACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGGAACGATCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp TTGCTGCCTGATCGTTCCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTAGGTTGGGCCTCCTCTTaGGGTCAATCTAAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: LLPDRSSGSFISEGHPAVGWASS*GQSKCS
Trigger: AGAACACTTAGATTGACCTCAAGAGGAGGCCCAACC...TACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGGAACGATCAGGCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp TTGCTGCCTGATCGTTCCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTAATGTGTGGCTCTGTCTaGAGCACCATTTGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LLPDRSSGSFISEGHPAVMCGSV*STIWGL
Trigger: CAAACCCCAAATGGTGCTGCAGACAGAGCCACACAT...TACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGGAACGATCAGGCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp TGCCTGATCGTTCCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGAGTGTCATGGCTTCCCTTaGCTAGGAAAGGGAATTCCC +
Preference number: 4 (lower is better)
Translates to: CLIVPLEASSQRGTRLYECHGFP*LGKGIP
Trigger: GGGAATTCCCTTTCCTAGCCAAGGGAAGCCATGACA...CTCATACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGGAACGATCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CAA 72 bp GCTGAAAGATCCGCTGTTAGTCTGATGGGCTTCCCTTaGTGGGTAACCCCACCTTTCTCTCTGGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: AERSAVSLMGFP*WVTPPFSLAAL
Trigger: AAGGGCAGCCAGAGAGAAAGGTGGGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGCGGATCTTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp TCCCATCTCCTCCAACCAGCCACAAGATGCAACAATGACATGGCGAGAGAGAATGAGGTACTGGGACTCTaGCTGGCTTCCTTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SHLLQPATRCNNDMARENEVLGL*LASLLL
Trigger: GAGGAGCAAGGAAGCCAGTCAGAGTCCCAGTACCTC...ATTCTCTCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTGGAGGAGATGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR TCA 90 bp TCCCATCTCCTCCAACCAGCCACAAGATGCAACAATGACATGGCGAGAGAGAATCCTTCAGCCACAGACTaGAGGCTGTACTGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: SHLLQPATRCNNDMARENPSATD*RLYCRL
Trigger: AAGCCGGCAGTACAGCCTTCAGTCTGTGGCTGAAGG...ATTCTCTCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTGGAGGAGATGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR TCA 90 bp CCCCCATGTTCTTCTCTCCTCCCCTCCAGGTACGATGATGACCTGACCTGGAACACAACTTCTTGTGCCTaGTCCTGCTTTGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PPCSSLLPSRYDDDLTWNTTSCA*SCFVFQ
Trigger: CTGGAACACAAAGCAGGATCAGGCACAAGAAGTTGT...GTTCCAGGTCAGGTCATCATCGTACCTGGAGGGGAGGAGAGAAGAACATGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR TCA 90 bp AGAATGTTGAGTATTGGCCCCCACTCTCTTCTGGCTTGTATAGTTTCTGCTGAACACACCAGGCCTCCTTaGGCTGCAGTGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: RMLSIGPHSLLACIVSAEHTRPP*AAVGST
Trigger: GGTGGAGCCCACTGCAGCTCAAGGAGGCCTGGTGTG...TTCAGCAGAAACTATACAAGCCAGAAGAGAGTGGGGGCCAATACTCAACATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp CTGCCTTTTGTTCAGCTATGCCCTGCCCGCAGAGGTGGAGTCTACAGAGGCACAAGGCAGGCCTGTTGGTaGCAAAATCTGTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: LPFVQLCPARRGGVYRGTRQACW*QNLSAF
Trigger: AAATGCTGACAGATTTTGTCACCAACAGGCCTGCCT...TGTGCCTCTGTAGACTCCACCTCTGCGGGCAGGGCATAGCTGAACAAAAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp TTGCTGCCTGATCGTTCCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGTTCCTTTCCATGTTaGGTGCTTCCTTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LLPDRSSGSFISEGHPAVCSFPC*VLPSGA
Trigger: AGCTCCTGAAGGAAGCACTCAACATGGAAAGGAACA...TACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGGAACGATCAGGCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp AGCTGCAGTGGGCTCCACCCAGTTCAAGCTTCCCAGAGGCTTTGTTTACTTACTGGCAATGTCCCACCCTaGTTCAGCTCACACTCTGTG +
Preference number: 4 (lower is better)
Translates to: SCSGLHPVQASQRLCLLTGNVPP*FSSHSV
Trigger: CACAGAGTGTGAGCTGAAGCAGGGTGGGACATTGCC...AGTAAGTAAACAAAGCCTCTGGGAAGCTTGAACTGGGTGGAGCCCACTGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp AGCTGCAGTGGGCTCCACCCAGTTCAAGCTTCCCAGAGGCTTTGTTTACTTACTTCTGTTAGCTGTGCTTaGAGTGGGGGAGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: SCSGLHPVQASQRLCLLTSVSCA*SGGGSM
Trigger: CATGGAGCCTCCCCCACTGCAAGCACAGCTAACAGA...AGTAAGTAAACAAAGCCTCTGGGAAGCTTGAACTGGGTGGAGCCCACTGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp CCCCCATGTTCTTCTCTCCTCCCCTCCAGGTACGATGATGACCTGACCTGGAACCTATTGTGTAGTCCTTaGGTAGCACTGATCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PPCSSLLPSRYDDDLTWNLLCSP*VALICG
Trigger: GCCACAGATCAGTGCTACCCAAGGACTACACAATAG...GTTCCAGGTCAGGTCATCATCGTACCTGGAGGGGAGGAGAGAAGAACATGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR CCA 90 bp TGCCTGATCGTTCCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGAGGTGTTCTCAGAAGAATaGTGTGTCCATGTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: CLIVPLEASSQRGTRLYEVFSEE*CVHVWL
Trigger: GAGCCACACATGGACACACCATTCTTCTGAGAACAC...CTCATACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGGAACGATCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp TCTCGTGCCATGGTTTTTAGCTCCATCAGGTCATTTAAGGCCTTCTCTATGCTGCCCTGCCCGCAGAGGTaGAGTCTACAGAGGCACACC +
Preference number: 4 (lower is better)
Translates to: SRAMVFSSIRSFKAFSMLPCPQR*SLQRHT
Trigger: GGTGTGCCTCTGTAGACTCCACCTCTGCGGGCAGGG...CAGCATAGAGAAGGCCTTAAATGACCTGATGGAGCTAAAAACCATGGCACGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp CCCCCATGTTCTTCTCTCCTCCCCTCCAGGTACGATGATGACCTGACCTGGAACAGACATTCCTATTCATaGGGCCACAGTATCTCCCAT +
Preference number: 4 (lower is better)
Translates to: PPCSSLLPSRYDDDLTWNRHSYS*GHSISH
Trigger: ATGGGAGATACTGTGGCCTCATGAATAGGAATGTCT...GTTCCAGGTCAGGTCATCATCGTACCTGGAGGGGAGGAGAGAAGAACATGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000679022.1
CDS-3UTR TCA 90 bp TTCATCTTTCTCCTGTGCTGGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGTCGGCTTCCCTACTTTTaGGGTACTGGGACTCTGACT +
Preference number: 4 (lower is better)
Translates to: FIFLLCWVLPALKHWTPSRLPYF*GTGTLT
Trigger: AGTCAGAGTCCCAGTACCTCAAAAGTAGGGAAGCCG...ACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR TCA 90 bp GGGGGAGGCTCCATGGACGTGGGACCCTCCAAGCCACGCATGGGATATAATCTCTTGATCTTCAGTCACTaGTACCTTTTCTTCCACTTG +
Preference number: 4 (lower is better)
Translates to: GGGSMDVGPSKPRMGYNLLIFSH*YLFFHL
Trigger: CAAGTGGAAGAAAAGGTATCAGTGACTGAAGATCAA...GAGATTATATCCCATGCGTGGCTTGGAGGGTCCCACGTCCATGGAGCCTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp ATTATTAGGATTCTCTGTTATAGCAGCCTGGCCTTACCTCAACTAATTCAAAAGCACCGCTCCGGGCGCTaGAGCCTTCCGGCAACCCGG +
Preference number: 4 (lower is better)
Translates to: IIRILCYSSLALPQLIQKHRSGR*SLPATR
Trigger: CCGGGTTGCCGGAAGGCTGCAGCGCCCGGAGCGGTG...CTTTTGAATTAGTTGAGGTAAGGCCAGGCTGCTATAACAGAGAATCCTAATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678950.1
CDS-3UTR GCA 90 bp CCCTGTGGCCAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGCCGAGCCTTGGGGAAACATaGTGCCCCCATGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PCGQYEHVTKWSPMECEPSLGET*CPHVLL
Trigger: GAGAAGAACATGGGGGCAGCATGTTTCCCCAAGGCT...CGGCTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTGGCCACAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR GCA 90 bp TTGCTGCCTGATCGTTCCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGCAGAAGTTTCTGCTaGCTTTTGTTCAGCTATGCC +
Preference number: 4 (lower is better)
Translates to: LLPDRSSGSFISEGHPAVCRSFC*LLFSYA
Trigger: GGCATAGCTGAACAAAAGGCAGCAGAAACTTCTGCA...TACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGGAACGATCAGGCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp CCAACTTTGTTCTGTTGCTGGCGAGGAGCTGCATTCCTTTGGAGGAGGAGAGAGCTGGAAGTCCAGTTTTaGCTGGGTATCACCAGTGGA +
Preference number: 4 (lower is better)
Translates to: PTLFCCWRGAAFLWRRRELEVQF*LGITSG
Trigger: TCCACTGGTGATACCCAGGCAAAACTGGACTTCCAG...CTCTCTCCTCCTCCAAAGGAATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp CCCTGTGGCCAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGCCGTCACAGGTAGGAGGCTaGGCCACAAAAGGGATACAG +
Preference number: 4 (lower is better)
Translates to: PCGQYEHVTKWSPMECEPSQVGG*ATKGIQ
Trigger: CTGTATCCCTTTTGTGGCCCAGCCTCCTACCTGTGA...CGGCTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTGGCCACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR CCA 90 bp TTCATCTTTCTCCTGTGCTGGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGTGGGCGGCAATCTCCTTaGCCTTGTTGCTCTATATCC +
Preference number: 4 (lower is better)
Translates to: FIFLLCWVLPALKHWTPSGRQSP*PCCSIS
Trigger: GGATATAGAGCAACAAGGCCAAGGAGATTGCCGCCC...ACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CCA 90 bp TTCATCTTTCTCCTGTGCTGGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGTTACTGGGACTCTGACTaGCTTCCTTGCTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FIFLLCWVLPALKHWTPSYWDSD*LPCSSA
Trigger: AGCTGAGGAGCAAGGAAGCCAGTCAGAGTCCCAGTA...ACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CCA 90 bp TGCCTGATCGTTCCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGAGGTCTGCAGCACCATTTaGGGTTTGATTGCTTCTATG +
Preference number: 4 (lower is better)
Translates to: CLIVPLEASSQRGTRLYEVCSTI*GLIASM
Trigger: CATAGAAGCAATCAAACCCCAAATGGTGCTGCAGAC...CTCATACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGGAACGATCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp CCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGAGATGTCAGTCGGCACCTTTTCTTCCACTTaGTTGAATCAGCTACTGAAG +
Preference number: 4 (lower is better)
Translates to: PLEASSQRGTRLYEMSVGTFSST*LNQLLK
Trigger: CTTCAGTAGCTGATTCAATCAAGTGGAAGAAAAGGT...GCCGACTGACATCTCATACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGGGAGTCCCTTCAGACTaGGGTCTCCAGGTAACCGCA +
Preference number: 4 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKGVPSD*GLQVTA
Trigger: TGCGGTTACCTGGAGACCGCAGTCTGAAGGGACTCC...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678480.1
CDS-3UTR GCA 90 bp TTTGCTGGAAGTCCAGTTTTGCCTGGGTATCACCAGTGGAGGTGGCAGAACAGTCTGGAAGTCCAGTTTTaGCTGGGTATCACCAGTGGA +
Preference number: 4 (lower is better)
Translates to: FAGSPVLPGYHQWRWQNSLEVQF*LGITSG
Trigger: TCCACTGGTGATACCCAGGCAAAACTGGACTTCCAG...ACTGTTCTGCCACCTCCACTGGTGATACCCAGGCAAAACTGGACTTCCAGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp CTCCCCTGTGGCCAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGTCACAGGTAGGAGGCTaGGCCACAAAAGGGATACAG +
Preference number: 4 (lower is better)
Translates to: LPCGQYEHVTKWSPMECESQVGG*ATKGIQ
Trigger: CTGTATCCCTTTTGTGGCCCAGCCTCCTACCTGTGA...CTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTGGCCACAGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR CCA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTTCACAGGTAGGAGGCTaGGCCACAAAAGGGATACAG +
Preference number: 4 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFSQVGG*ATKGIQ
Trigger: CTGTATCCCTTTTGTGGCCCAGCCTCCTACCTGTGA...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CCA 90 bp CTTCCTTGCTCCTCAGCTTGCAGACGGTCTATTGTGAGACTTCACCTTGTGATTAGGGGAAGGGGGAAATaGAGAGTTGCTGTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: LPCSSACRRSIVRLHLVIRGRGK*RVAVPW
Trigger: CCACGGAACAGCAACTCTCCATTTCCCCCTTCCCCT...AATCACAAGGTGAAGTCTCACAATAGACCGTCTGCAAGCTGAGGAGCAAGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CCA 90 bp TTCATCTTTCTCCTGTGCTGGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGTAAAGCAGGCAGGAGATaGAAGAGCAGACTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: FIFLLCWVLPALKHWTPSKAGRR*KSRLAE
Trigger: CTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTTT...ACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CCA 90 bp ACAGTCAGAACCCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTCTTGTTGGAGGACAGTaGTTGGGCCTCCTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: TVRTLSCRSVGICWKSSFLVGGQ*LGLLLR
Trigger: CCTCAAGAGGAGGCCCAACCACTGTCCTCCAACAAG...AAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGGGTTCTGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp GAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTGCAGAATCAGCTCACACTCTGTaGGCTGCACCCACTGTCCGA +
Preference number: 4 (lower is better)
Translates to: ENHYSLQSCQTGTFKSAESAHTL*AAPTVR
Trigger: TCGGACAGTGGGTGCAGCCCACAGAGTGTGAGCTGA...TTCTGCAGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp GTATTAAGGTGGAAGTGTCCCAATTTTCCAGGTACTGTCTGTCATGGCTTCCCTTCAGCTCACACTCTGTaGGCTGCACCCACTGTCCGA +
Preference number: 4 (lower is better)
Translates to: VLRWKCPNFPGTVCHGFPSAHTL*AAPTVR
Trigger: TCGGACAGTGGGTGCAGCCCACAGAGTGTGAGCTGA...AGGGAAGCCATGACAGACAGTACCTGGAAAATTGGGACACTTCCACCTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp TTTGCTGGAAGTCCAGTTTTGCCTGGGTATCACCAGTGGAGGTGGCAGAACAGTCCTCCAAGCCACGCATaGGATATAATCTCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: FAGSPVLPGYHQWRWQNSPPSHA*DIISWC
Trigger: ACACCAGGAGATTATATCCCATGCGTGGCTTGGAGG...ACTGTTCTGCCACCTCCACTGGTGATACCCAGGCAAAACTGGACTTCCAGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp TTTGCTGGAAGTCCAGTTTTGCCTGGGTATCACCAGTGGAGGTGGCAGAACAGTCCTGGGTATCACCAGTaGAGGTGGCAGAACAGTAAA +
Preference number: 4 (lower is better)
Translates to: FAGSPVLPGYHQWRWQNSPGYHQ*RWQNSK
Trigger: TTTACTGTTCTGCCACCTCCACTGGTGATACCCAGG...ACTGTTCTGCCACCTCCACTGGTGATACCCAGGCAAAACTGGACTTCCAGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp GGCTCCACCCAGTTCAAGCTTCCCAGAGGCTTTGTTTACTTACTCAAGCCTCAGAAGTCCAGTTTTGCCTaGGTATCACCAGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GSTQFKLPRGFVYLLKPQKSSFA*VSPVEV
Trigger: CACCTCCACTGGTGATACCCAGGCAAAACTGGACTT...CTGAGGCTTGAGTAAGTAAACAAAGCCTCTGGGAAGCTTGAACTGGGTGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp CTGGAAGTCCAGTTTTGCCTGGGTATCACCAGTGGAGGTGGCAGAACAGTAAATGGAGCTGCATTCCTTTaGAGGAGGAGAGAGAGACTC +
Preference number: 4 (lower is better)
Translates to: LEVQFCLGITSGGGRTVNGAAFL*RRRERL
Trigger: GAGTCTCTCTCTCCTCCTCCAAAGGAATGCAGCTCC...ATTTACTGTTCTGCCACCTCCACTGGTGATACCCAGGCAAAACTGGACTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp CTCCCCTGTGGCCAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGAGGCAGTGTGGAGAATaGCTGAATTCCCTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: LPCGQYEHVTKWSPMECERQCGE*LNSLWS
Trigger: ACTCCACAGGGAATTCAGTCATTCTCCACACTGCCT...CTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTGGCCACAGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR TCA 90 bp TCCCATCTCCTCCAACCAGCCACAAGATGCAACAATGACATGGCGAGAGAGAATGTGGGATCATGTTTCTaGCCTTTGATACAGCACCCC +
Preference number: 4 (lower is better)
Translates to: SHLLQPATRCNNDMARENVGSCF*PLIQHP
Trigger: GGGGTGCTGTATCAAAGGTCAGAAACATGATCCCAC...ATTCTCTCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTGGAGGAGATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR TCA 90 bp CGGCAATCTCCTTGGCCTTGTTGCTCTATATCCCTAATAACAGGTAACTCTGATCCTTCAGCCACAGACTaGAGGCTGTACTGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: RQSPWPCCSISLITGNSDPSATD*RLYCRL
Trigger: AAGCCGGCAGTACAGCCTTCAGTCTGTGGCTGAAGG...ATCAGAGTTACCTGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR TCA 90 bp CCCCCATGTTCTTCTCTCCTCCCCTCCAGGTACGATGATGACCTGACCTGGAACCCAAAATGCTTGGGATaGAGTGTTTTGGATTTCAGA +
Preference number: 4 (lower is better)
Translates to: PPCSSLLPSRYDDDLTWNPKCLG*SVLDFR
Trigger: TCTGAAATCCAAAACACTTCATCCCAAGCATTTTGG...GTTCCAGGTCAGGTCATCATCGTACCTGGAGGGGAGGAGAGAAGAACATGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR TCA 90 bp AGGTGGAAGTGTCCCAATTTTCCAGGTACTGTCTGTCATGGCTTCCCTTGGCTATGGAGTTGCTCTTCTTaGGGAGTATCTCTGTGGCGT +
Preference number: 4 (lower is better)
Translates to: RWKCPNFPGTVCHGFPWLWSCSS*GVSLWR
Trigger: ACGCCACAGAGATACTCCTCAAGAAGAGCAACTCCA...TAGCCAAGGGAAGCCATGACAGACAGTACCTGGAAAATTGGGACACTTCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp GCTGGGAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTGTGGAGTTGCTCTTCTTaGGGAGTATCTCTGTGGCGT +
Preference number: 4 (lower is better)
Translates to: AGRTTTLFKAVRQGRLSLWSCSS*GVSLWR
Trigger: ACGCCACAGAGATACTCCTCAAGAAGAGCAACTCCA...CAGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTCCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp TTGCTGCCTGATCGTTCCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTATTTCTCCTTGACTTATaGAGCTTAGTTTGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LLPDRSSGSFISEGHPAVFLLDL*SLVWLD
Trigger: ATCCAGCCAAACTAAGCTTCATAAGTCAAGGAGAAA...TACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGGAACGATCAGGCAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp CTGCCTTTTGTTCAGCTATGCCCTGCCCGCAGAGGTGGAGTCTACAGAGGCACATTTCTCCTTGACTTATaGAGCTTAGTTTGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LPFVQLCPARRGGVYRGTFLLDL*SLVWLD
Trigger: ATCCAGCCAAACTAAGCTTCATAAGTCAAGGAGAAA...TGTGCCTCTGTAGACTCCACCTCTGCGGGCAGGGCATAGCTGAACAAAAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp CCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTGCCTGGGTATCTGTTCCTTTCCATGTTaGGTGCTTCCTTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PQLQVCWNLLEVQFCLGICSFPC*VLPSGA
Trigger: AGCTCCTGAAGGAAGCACTCAACATGGAAAGGAACA...GATACCCAGGCAAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp TTCATCTTTCTCCTGTGCTGGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGTCTAGTTTTCCTCCTTTaGTCCCGTCTAGTCACTTCG +
Preference number: 4 (lower is better)
Translates to: FIFLLCWVLPALKHWTPSLVFLL*SRLVTS
Trigger: CGAAGTGACTAGACGGGAGCAAAGGAGGAAAACTAG...ACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677116.1
CDS-3UTR GCA 90 bp TCCCATCTCCTCCAACCAGCCACAAGATGCAACAATGACATGGCGAGAGAGAATACAAGCACAAGTACGTaGATACAAGCACAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SHLLQPATRCNNDMARENTSTST*IQAQAC
Trigger: GCAGGCCTGTGCTTGTATGCACGTACTTGTGCTTGT...ATTCTCTCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTGGAGGAGATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR GCA 90 bp AGCCCAGTATTAAGGTGGAAGTGTCCCAATTTTCCAGGTACTGTCTGTCATGGCAATTCCCCAACCCTTTaGACTTCCCGGGTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: SPVLRWKCPNFPGTVCHGNSPTL*TSRVRQ
Trigger: TTGCCTCACCCGGGAAGTGCAAAGGGTTGGGGAATT...GCCATGACAGACAGTACCTGGAAAATTGGGACACTTCCACCTTAATACTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp GCTGGGAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTGGTCAGAACCCTCAGCTaGAGGTCTGTTGGAATTTGC +
Preference number: 4 (lower is better)
Translates to: AGRTTTLFKAVRQGRLSLVRTLS*RSVGIC
Trigger: GCAAATTCCAACAGACCTGCAGCTGAGGGTTCTGAC...CAGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTCCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTATCTTTCTCCTGTGCTaGGTGCTTCCTGCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFIFLLC*VLPALK
Trigger: TTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGAT...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CCA 90 bp ACAGTCAGAACCCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTTGGTGTGTCCATGTGTaGCTCTGTCTGCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: TVRTLSCRSVGICWKSSFWCVHV*LCLQHH
Trigger: ATGGTGCTGCAGACAGAGCCACACATGGACACACCA...AAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGGGTTCTGACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp TGCTGGGAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTGGAGCTGCATTCCTTTaGAGGAGGAGAGAGAGACTC +
Preference number: 4 (lower is better)
Translates to: CWENHYSLQSCQTGTFKSGAAFL*RRRERL
Trigger: GAGTCTCTCTCTCCTCCTCCAAAGGAATGCAGCTCC...AGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTCCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp GTCCATGTGTGGCTCTGTCTGCAGCACCATTTGGGGTTTGATTGCTTCTATGCCGAGTGTTTTCCAGCTTaGTTCCATTCTCCCCGTCAT +
Preference number: 4 (lower is better)
Translates to: VHVWLCLQHHLGFDCFYAECFPA*FHSPRH
Trigger: ATGACGGGGAGAATGGAACCAAGCTGGAAAACACTC...GGCATAGAAGCAATCAAACCCCAAATGGTGCTGCAGACAGAGCCACACATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CAA 72 bp AACAGTCAGAACCCTCAGCTGCAGGTCTGTTGGAATTaGCTGGAAGTCCAGTTTTGCCTGGGTATCACCAGT +
Preference number: 4 (lower is better)
Translates to: NSQNPQLQVCWN*LEVQFCLGITS
Trigger: ACTGGTGATACCCAGGCAAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGGGTTCTGACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CAA 72 bp TTTTGCAGTGGCTGGTACCAGTTGTTCCTTTCCATGTaGAGTGCTTCCTTCAGGAGCTCTTGTAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: FCSGWYQLFLSM*SASFRSSCKAG
Trigger: GCCTGCCTTACAAGAGCTCCTGAAGGAAGCACTCAACATGGAAAGGAACAACTGGTACCAGCCACTGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp CTCCCCTGTGGCCAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGAGTGTGGAGAATGACTaGATTCCCTGTGGAGTACCT +
Preference number: 4 (lower is better)
Translates to: LPCGQYEHVTKWSPMECESVEND*IPCGVP
Trigger: AGGTACTCCACAGGGAATTCAGTCATTCTCCACACT...CTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTGGCCACAGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR TCA 90 bp TTCATCTTTCTCCTGTGCTGGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGTTCTTTCCATAGATGCTaGTTCCTGTTCCCATTTCCC +
Preference number: 4 (lower is better)
Translates to: FIFLLCWVLPALKHWTPSSFHRC*FLFPFP
Trigger: GGGAAATGGGAACAGGAATCAGCATCTATGGAAAGA...ACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR TCA 90 bp CTTCCTTGCTCCTCAGCTTGCAGACGGTCTATTGTGAGACTTCACCTTGTGATTGTGGGATCATGTTTCTaGCCTTTGATACAGCACCCC +
Preference number: 4 (lower is better)
Translates to: LPCSSACRRSIVRLHLVIVGSCF*PLIQHP
Trigger: GGGGTGCTGTATCAAAGGTCAGAAACATGATCCCAC...AATCACAAGGTGAAGTCTCACAATAGACCGTCTGCAAGCTGAGGAGCAAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR TCA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGAGGTACTGGGACTCTaGCTGGCTTCCTTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYEVLGL*LASLLL
Trigger: GAGGAGCAAGGAAGCCAGTCAGAGTCCCAGTACCTC...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR TCA 90 bp CCCTGTGGCCAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGCCGATTTTCATCTCTAGGTaGCATTTCTCAGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: PCGQYEHVTKWSPMECEPIFISR*HFSASP
Trigger: AGGGGAGGCTGAGAAATGTCACCTAGAGATGAAAAT...CGGCTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTGGCCACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR TCA 90 bp CTCCCCTGTGGCCAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGACAACTTCTTGTGCCTaGTCCTGCTTTGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LPCGQYEHVTKWSPMECETTSCA*SCFVFQ
Trigger: CTGGAACACAAAGCAGGATCAGGCACAAGAAGTTGT...CTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTGGCCACAGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR TCA 90 bp AACATGCTGCCCCCATGTTCTTCTCTCCTCCCCTCCAGGTACGATGATGACCTGATTCAAAAAGCATATTaGAAAGTGGCTGTCCCTACC +
Preference number: 4 (lower is better)
Translates to: NMLPPCSSLLPSRYDDDLIQKAY*KVAVPT
Trigger: GGTAGGGACAGCCACTTTTCAATATGCTTTTTGAAT...CAGGTCATCATCGTACCTGGAGGGGAGGAGAGAAGAACATGGGGGCAGCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR TCA 90 bp CCAACTTTGTTCTGTTGCTGGCGAGGAGCTGCATTCCTTTGGAGGAGGAGAGAGGCACCATTTGGGGTTTaGTTGCTTCTATGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: PTLFCCWRGAAFLWRRREAPFGV*LLLCLF
Trigger: AAAAAGGCATAGAAGCAATCAAACCCCAAATGGTGC...CTCTCTCCTCCTCCAAAGGAATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTCAACCAGCCACAAGATaGAACAATGACATGGCGAGA +
Preference number: 4 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFQPATR*NNDMAR
Trigger: TCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTG...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR GCA 90 bp CGGCAATCTCCTTGGCCTTGTTGCTCTATATCCCTAATAACAGGTAACTCTGATTCTGACTGGCTTCCTTaGTCCTCAGCTTGCAGACGG +
Preference number: 4 (lower is better)
Translates to: RQSPWPCCSISLITGNSDSDWLP*SSACRR
Trigger: CCGTCTGCAAGCTGAGGAGCAAGGAAGCCAGTCAGA...ATCAGAGTTACCTGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR GCA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTCTTACACTAGTGATTTaGCAAGGGCTCTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFLTLVI*QGLSGL
Trigger: AAGGCCTGAGAGCCCTTGGCAAATCACTAGTGTAAG...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CCA 90 bp AACATGCTGCCCCCATGTTCTTCTCTCCTCCCCTCCAGGTACGATGATGACCTGTCCAATCCTGACATATaGGCAGACATTCCTATTCAT +
Preference number: 4 (lower is better)
Translates to: NMLPPCSSLLPSRYDDDLSNPDI*ADIPIH
Trigger: ATGAATAGGAATGTCTGCCCATATGTCAGGATTGGA...CAGGTCATCATCGTACCTGGAGGGGAGGAGAGAAGAACATGGGGGCAGCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR CCA 90 bp TCCCATCTCCTCCAACCAGCCACAAGATGCAACAATGACATGGCGAGAGAGAATAAGCAGAAAGTAGGATaGAGGTTGCCAGGGTTTAGG +
Preference number: 4 (lower is better)
Translates to: SHLLQPATRCNNDMARENKQKVG*RLPGFR
Trigger: CCTAAACCCTGGCAACCTCCATCCTACTTTCTGCTT...ATTCTCTCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTGGAGGAGATGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGTACTGGGACTCTGACTaGCTTCCTTGCTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKYWDSD*LPCSSA
Trigger: AGCTGAGGAGCAAGGAAGCCAGTCAGAGTCCCAGTA...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CCA 90 bp CCCTGTGGCCAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGCCGGGTAGCACTGATCTGTaGCATGGCATACACTGTAAA +
Preference number: 4 (lower is better)
Translates to: PCGQYEHVTKWSPMECEPGSTDL*HGIHCK
Trigger: TTTACAGTGTATGCCATGCCACAGATCAGTGCTACC...CGGCTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTGGCCACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR CCA 90 bp CCCTGTGGCCAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGCCGAGCCTGCACGCATCCTaGATATACTTTCATGATGTC +
Preference number: 4 (lower is better)
Translates to: PCGQYEHVTKWSPMECEPSLHAS*IYFHDV
Trigger: GACATCATGAAAGTATATCCAGGATGCGTGCAGGCT...CGGCTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTGGCCACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CCA 90 bp CTGGAAGTCCAGTTTTGCCTGGGTATCACCAGTGGAGGTGGCAGAACAGTAAATGTGTTCTCAGAAGAATaGTGTGTCCATGTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LEVQFCLGITSGGGRTVNVFSEE*CVHVWL
Trigger: GAGCCACACATGGACACACCATTCTTCTGAGAACAC...ATTTACTGTTCTGCCACCTCCACTGGTGATACCCAGGCAAAACTGGACTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp CCAACTTTGTTCTGTTGCTGGCGAGGAGCTGCATTCCTTTGGAGGAGGAGAGAGTATCAAACTCCATGCTaGGAGAACCACTACTCTCTT +
Preference number: 4 (lower is better)
Translates to: PTLFCCWRGAAFLWRRREYQTPC*ENHYSL
Trigger: AAGAGAGTAGTGGTTCTCCCAGCATGGAGTTTGATA...CTCTCTCCTCCTCCAAAGGAATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp ACAGTCAGAACCCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTCAGCTGCAGGTCTGTTaGAATTTGCTGGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: TVRTLSCRSVGICWKSSFQLQVC*NLLEVQ
Trigger: CTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTG...AAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGGGTTCTGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp AGCTGCAGTGGGCTCCACCCAGTTCAAGCTTCCCAGAGGCTTTGTTTACTTACTGTAGTTCTCGTGCCATaGTTTTTAGCTCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: SCSGLHPVQASQRLCLLTVVLVP*FLAPSG
Trigger: ACCTGATGGAGCTAAAAACCATGGCACGAGAACTAC...AGTAAGTAAACAAAGCCTCTGGGAAGCTTGAACTGGGTGGAGCCCACTGCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp CTGGAAGTCCAGTTTTGCCTGGGTATCACCAGTGGAGGTGGCAGAACAGTAAATGGCATGTTTTTGCAGTaGCTGGTACCAGTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LEVQFCLGITSGGGRTVNGMFLQ*LVPVVP
Trigger: AGGAACAACTGGTACCAGCCACTGCAAAAACATGCC...ATTTACTGTTCTGCCACCTCCACTGGTGATACCCAGGCAAAACTGGACTTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp CTTCTTGTGCCTGATCCTGCTTTGTGTTCCAGTAAGGAGGGTGAGAAAGGTCACTCCTTTGCAGGGACATaGATGAAGCTGGAAACCATC +
Preference number: 4 (lower is better)
Translates to: LLVPDPALCSSKEGEKGHSFAGT*MKLETI
Trigger: GATGGTTTCCAGCTTCATCCATGTCCCTGCAAAGGA...GTGACCTTTCTCACCCTCCTTACTGGAACACAAAGCAGGATCAGGCACAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678950.1
3UTR CAA 72 bp ACTCGTCAAAGTCATTCTCTATCCAACTTTGTTCTGTaGCTGGCGAGGAGCTGCATTCCTTTGGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TRQSHSLSNFVL*LARSCIPLEEE
Trigger: CTCCTCCTCCAAAGGAATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGGATAGAGAATGACTTTGACGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CAA 72 bp AGTGCTTCCTTCAGGAGCTCTTGTAAGGCAGGCCTGTaGGTGACAAAATCTGTCAGCATTTGCTGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: SASFRSSCKAGL*VTKSVSICWSV
Trigger: TACAGACCAGCAAATGCTGACAGATTTTGTCACCAACAGGCCTGCCTTACAAGAGCTCCTGAAGGAAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTAAGGAGATTCACATTTaGGTCAGTGAACTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFKEIHI*VSELGE
Trigger: CTCTCCCAGTTCACTGACTCAAATGTGAATCTCCTT...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR TCA 90 bp CTCCCCTGTGGCCAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGATTTTCATCTCTAGGTaGCATTTCTCAGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LPCGQYEHVTKWSPMECEIFISR*HFSASP
Trigger: AGGGGAGGCTGAGAAATGTCACCTAGAGATGAAAAT...CTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTGGCCACAGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR TCA 90 bp ACTTCTAGAGGAACCAGGCAGACAGAAACAAACGTGCTCCAAATTTTGTTTGCAGATCCGCTGTTAGTCTaGTGGGCTTCCCTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: TSRGTRQTETNVLQILFADPLLV*WASLCG
Trigger: CCCACAAAGGGAAGCCCATCAGACTAACAGCGGATC...TGCAAACAAAATTTGGAGCACGTTTGTTTCTGTCTGCCTGGTTCCTCTAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp ACAGTCAGAACCCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTAGGCAGGCCTGTTGGTaGCAAAATCTGTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: TVRTLSCRSVGICWKSSFRQACW*QNLSAF
Trigger: AAATGCTGACAGATTTTGTCACCAACAGGCCTGCCT...AAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGGGTTCTGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATTCTGACTGGCTTCCTTaGTCCTCAGCTTGCAGACGG +
Preference number: 4 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYSDWLP*SSACRR
Trigger: CCGTCTGCAAGCTGAGGAGCAAGGAAGCCAGTCAGA...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR GCA 90 bp CGGCAATCTCCTTGGCCTTGTTGCTCTATATCCCTAATAACAGGTAACTCTGATTTCATCTTTCTCCTGTaGTGGGTGCTTCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: RQSPWPCCSISLITGNSDFIFLL*WVLPAL
Trigger: GAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA...ATCAGAGTTACCTGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR GCA 90 bp CCCTGTGGCCAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGCCGTATAAAAGTACTAGGTaGCATGTCTACTGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: PCGQYEHVTKWSPMECEPYKSTR*HVYWLV
Trigger: GACCAGCCAGTAGACATGGCACCTAGTACTTTTATA...CGGCTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTGGCCACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR GCA 90 bp TGCCTGATCGTTCCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGAGCATTTGGGGTTTGATTaGTTCTATGCCTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: CLIVPLEASSQRGTRLYEHLGFD*FYAFLF
Trigger: AAACAAAAAGGCATAGAAGCAATCAAACCCCAAATG...CTCATACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGGAACGATCAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp GAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTGCAGAAATGTGTGGCTCTGTCTaGAGCACCATTTGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: ENHYSLQSCQTGTFKSAEMCGSV*STIWGL
Trigger: CAAACCCCAAATGGTGCTGCAGACAGAGCCACACAT...TTCTGCAGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp TTAAGAATGTTGAGTATTGGCCCCCACTCTCTTCTGGCTTGTATAGTTTCTGCTTCTGTTAGCTGTGCTTaGAGTGGGGGAGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: LRMLSIGPHSLLACIVSASVSCA*SGGGSM
Trigger: CATGGAGCCTCCCCCACTGCAAGCACAGCTAACAGA...AGCAGAAACTATACAAGCCAGAAGAGAGTGGGGGCCAATACTCAACATTCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp TTTGCTGGAAGTCCAGTTTTGCCTGGGTATCACCAGTGGAGGTGGCAGAACAGTAATTTGGCATGTTTTTaGAGTGGCTGGTACCAGTTG +
Preference number: 4 (lower is better)
Translates to: FAGSPVLPGYHQWRWQNSNLACF*SGWYQL
Trigger: CAACTGGTACCAGCCACTGCAAAAACATGCCAAATT...ACTGTTCTGCCACCTCCACTGGTGATACCCAGGCAAAACTGGACTTCCAGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp CCACCATATATGGGGTCTCAACTTGATTTATACTGCTATTTGATAGATTCCAGACGGCAACCCGGACGTTaGGTCGGTGTCAGCCACTCT +
Preference number: 4 (lower is better)
Translates to: PPYMGSQLDLYCYLIDSRRQPGR*VGVSHS
Trigger: AGAGTGGCTGACACCGACCCAACGTCCGGGTTGCCG...TCTGGAATCTATCAAATAGCAGTATAAATCAAGTTGAGACCCCATATATGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678950.1
CDS-3UTR CCA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTCTATATGCGACAACATaGGCAAACCTGAAGGGCATT +
Preference number: 4 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFLYATT*ANLKGI
Trigger: AATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAG...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGAAAGCAGGCAGGAGATaGAAGAGCAGACTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKKAGRR*KSRLAE
Trigger: CTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTTT...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CCA 90 bp CTCCCCTGTGGCCAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGGGTAGCACTGATCTGTaGCATGGCATACACTGTAAA +
Preference number: 4 (lower is better)
Translates to: LPCGQYEHVTKWSPMECEGSTDL*HGIHCK
Trigger: TTTACAGTGTATGCCATGCCACAGATCAGTGCTACC...CTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTGGCCACAGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR CCA 90 bp CTTCTTGTGCCTGATCCTGCTTTGTGTTCCAGTAAGGAGGGTGAGAAAGGTCACGCCATGTCTACTGGCTaGTCCAATAACTTTTATGGC +
Preference number: 4 (lower is better)
Translates to: LLVPDPALCSSKEGEKGHAMSTG*SNNFYG
Trigger: GCCATAAAAGTTATTGGACCAGCCAGTAGACATGGC...GTGACCTTTCTCACCCTCCTTACTGGAACACAAAGCAGGATCAGGCACAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CCA 90 bp CCAACTTTGTTCTGTTGCTGGCGAGGAGCTGCATTCCTTTGGAGGAGGAGAGAGGATGACGATTCTTTCTaGCTACTTCCTGCTAAAAAG +
Preference number: 4 (lower is better)
Translates to: PTLFCCWRGAAFLWRRREDDDSF*LLPAKK
Trigger: CTTTTTAGCAGGAAGTAGCCAGAAAGAATCGTCATC...CTCTCTCCTCCTCCAAAGGAATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp TGTAAGGCAGGCCTGTTGGTGACAAAATCTGTCAGCATTTGCTGGTCTGTAAAGTGTCATGGCTTCCCTTaGCTAGGAAAGGGAATTCCC +
Preference number: 4 (lower is better)
Translates to: CKAGLLVTKSVSICWSVKCHGFP*LGKGIP
Trigger: GGGAATTCCCTTTCCTAGCCAAGGGAAGCCATGACA...CTTTACAGACCAGCAAATGCTGACAGATTTTGTCACCAACAGGCCTGCCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp AGGAGTATCTCTGTGGCGTTTTCTGTATGTCCTGAATTTGAATGTTGGCCTGCCCCTCCAAGCCACGCATaGGATATAATCTCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: RSISVAFSVCPEFECWPAPPSHA*DIISWC
Trigger: ACACCAGGAGATTATATCCCATGCGTGGCTTGGAGG...GGCAGGCCAACATTCAAATTCAGGACATACAGAAAACGCCACAGAGATACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp TCGTCAAAGTCATTCTCTATCCAACTTTGTTCTGTTGCTGGCGAGGAGCTGCATCCTGGGTATCACCAGTaGAGGTGGCAGAACAGTAAA +
Preference number: 4 (lower is better)
Translates to: SSKSFSIQLCSVAGEELHPGYHQ*RWQNSK
Trigger: TTTACTGTTCTGCCACCTCCACTGGTGATACCCAGG...ATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGGATAGAGAATGACTTTGACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp GAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTGCAGAAAAGTCCAGTTTTGCCTaGGTATCACCAGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ENHYSLQSCQTGTFKSAEKSSFA*VSPVEV
Trigger: CACCTCCACTGGTGATACCCAGGCAAAACTGGACTT...TTCTGCAGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATCGGCTTCCCTACTTTTaGGGTACTGGGACTCTGACT +
Preference number: 4 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYRLPYF*GTGTLT
Trigger: AGTCAGAGTCCCAGTACCTCAAAAGTAGGGAAGCCG...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR TCA 90 bp CTTCCTTGCTCCTCAGCTTGCAGACGGTCTATTGTGAGACTTCACCTTGTGATTAAGGAGATTCACATTTaGGTCAGTGAACTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LPCSSACRRSIVRLHLVIKEIHI*VSELGE
Trigger: CTCTCCCAGTTCACTGACTCAAATGTGAATCTCCTT...AATCACAAGGTGAAGTCTCACAATAGACCGTCTGCAAGCTGAGGAGCAAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR TCA 90 bp GCTGGGAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTGGCACCATTTGGGGTTTaGTTGCTTCTATGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: AGRTTTLFKAVRQGRLSLAPFGV*LLLCLF
Trigger: AAAAAGGCATAGAAGCAATCAAACCCCAAATGGTGC...CAGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTCCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTTCCCTCTTTTCTCCTTaGCTTAATGCATGTATGGGT +
Preference number: 4 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFSLFSP*LNACMG
Trigger: ACCCATACATGCATTAAGGCAAGGAGAAAAGAGGGA...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR GCA 90 bp CGGCAATCTCCTTGGCCTTGTTGCTCTATATCCCTAATAACAGGTAACTCTGATACAAGCACAAGTACGTaGATACAAGCACAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RQSPWPCCSISLITGNSDTSTST*IQAQAC
Trigger: GCAGGCCTGTGCTTGTATGCACGTACTTGTGCTTGT...ATCAGAGTTACCTGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR GCA 90 bp CGGCAATCTCCTTGGCCTTGTTGCTCTATATCCCTAATAACAGGTAACTCTGATCCTTGCTCCTCAGCTTaGAGACGGTCTATTGTGAGA +
Preference number: 4 (lower is better)
Translates to: RQSPWPCCSISLITGNSDPCSSA*RRSIVR
Trigger: TCTCACAATAGACCGTCTGCAAGCTGAGGAGCAAGG...ATCAGAGTTACCTGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR GCA 90 bp CTCCCCTGTGGCCAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGTATAAAAGTACTAGGTaGCATGTCTACTGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LPCGQYEHVTKWSPMECEYKSTR*HVYWLV
Trigger: GACCAGCCAGTAGACATGGCACCTAGTACTTTTATA...CTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTGGCCACAGGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR GCA 90 bp ACTTCTAGAGGAACCAGGCAGACAGAAACAAACGTGCTCCAAATTTTGTTTGCAAATTCCCCAACCCTTTaGACTTCCCGGGTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: TSRGTRQTETNVLQILFANSPTL*TSRVRQ
Trigger: TTGCCTCACCCGGGAAGTGCAAAGGGTTGGGGAATT...TGCAAACAAAATTTGGAGCACGTTTGTTTCTGTCTGCCTGGTTCCTCTAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp AGGTGGAAGTGTCCCAATTTTCCAGGTACTGTCTGTCATGGCTTCCCTTGGCTAAATTTGGCATGTTTTTaGAGTGGCTGGTACCAGTTG +
Preference number: 4 (lower is better)
Translates to: RWKCPNFPGTVCHGFPWLNLACF*SGWYQL
Trigger: CAACTGGTACCAGCCACTGCAAAAACATGCCAAATT...TAGCCAAGGGAAGCCATGACAGACAGTACCTGGAAAATTGGGACACTTCCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATTCACAGGTAGGAGGCTaGGCCACAAAAGGGATACAG +
Preference number: 4 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYSQVGG*ATKGIQ
Trigger: CTGTATCCCTTTTGTGGCCCAGCCTCCTACCTGTGA...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CCA 90 bp CACGCAGGTGAGGACAATGTCCTAAAATATAATGGACATCCAGAAAGAAGGAACTCACAGGTAGGAGGCTaGGCCACAAAAGGGATACAG +
Preference number: 4 (lower is better)
Translates to: HAGEDNVLKYNGHPERRNSQVGG*ATKGIQ
Trigger: CTGTATCCCTTTTGTGGCCCAGCCTCCTACCTGTGA...GTTCCTTCTTTCTGGATGTCCATTATATTTTAGGACATTGTCCTCACCTGCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR CCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGAAGCAGAAAGTAGGATaGAGGTTGCCAGGGTTTAGG +
Preference number: 4 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKKQKVG*RLPGFR
Trigger: CCTAAACCCTGGCAACCTCCATCCTACTTTCTGCTT...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGCTACTTTTGAGGTACTaGGACTCTGACTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKLLLRY*DSDWLP
Trigger: AGGAAGCCAGTCAGAGTCCCAGTACCTCAAAAGTAG...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CCA 90 bp CGGCAATCTCCTTGGCCTTGTTGCTCTATATCCCTAATAACAGGTAACTCTGATATCTTTCTCCTGTGCTaGGTGCTTCCTGCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: RQSPWPCCSISLITGNSDIFLLC*VLPALK
Trigger: TTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGAT...ATCAGAGTTACCTGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CCA 90 bp CCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTGCCTGGGTATCGATGACGATTCTTTCTaGCTACTTCCTGCTAAAAAG +
Preference number: 4 (lower is better)
Translates to: PQLQVCWNLLEVQFCLGIDDDSF*LLPAKK
Trigger: CTTTTTAGCAGGAAGTAGCCAGAAAGAATCGTCATC...GATACCCAGGCAAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp TGCTGGGAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTATGGTGATGTACAGATaGGGTTTTGGTGTGGATGTC +
Preference number: 4 (lower is better)
Translates to: CWENHYSLQSCQTGTFKSMVMYR*GFGVDV
Trigger: GACATCCACACCAAAACCCCATCTGTACATCACCAT...AGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTCCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp TGGTACCAGTTGTTCCTTTCCATGTTGAGTGCTTCCTTCAGGAGCTCTTGTAAGTCCGCTTTTCTGCTCTaGTTTCTCCCCATCTTTGTG +
Preference number: 4 (lower is better)
Translates to: WYQLFLSMLSASFRSSCKSAFLL*FLPIFV
Trigger: CACAAAGATGGGGAGAAACCAGAGCAGAAAAGCGGA...CTTACAAGAGCTCCTGAAGGAAGCACTCAACATGGAAAGGAACAACTGGTACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp GTCCATGTGTGGCTCTGTCTGCAGCACCATTTGGGGTTTGATTGCTTCTATGCCCACCCTTCTTTAGCTTaGAGAAGTTTGTTATTACCG +
Preference number: 4 (lower is better)
Translates to: VHVWLCLQHHLGFDCFYAHPSLA*RSLLLP
Trigger: CGGTAATAACAAACTTCTCCAAGCTAAAGAAGGGTG...GGCATAGAAGCAATCAAACCCCAAATGGTGCTGCAGACAGAGCCACACATGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp GGCTCCACCCAGTTCAAGCTTCCCAGAGGCTTTGTTTACTTACTCAAGCCTCAGCACCCTTCTTTAGCTTaGAGAAGTTTGTTATTACCG +
Preference number: 4 (lower is better)
Translates to: GSTQFKLPRGFVYLLKPQHPSLA*RSLLLP
Trigger: CGGTAATAACAAACTTCTCCAAGCTAAAGAAGGGTG...CTGAGGCTTGAGTAAGTAAACAAAGCCTCTGGGAAGCTTGAACTGGGTGGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CAA 72 bp CTGCCCTCAAACACTGGACTCCAAGTTCTTCAGCTTTaGGACTCTTGGACTTACACTAGTGATTTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LPSNTGLQVLQL*DSWTYTSDLPR
Trigger: CCTTGGCAAATCACTAGTGTAAGTCCAAGAGTCCAAAAGCTGAAGAACTTGGAGTCCAGTGTTTGAGGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
3UTR CAA 72 bp GGTGGCAGAACAGTAAATATTGCAGAACGGCAAATGTaGCTGCCTGATCGTTCCTCTGGAAGCTTCATCTCA +
Preference number: 4 (lower is better)
Translates to: GGRTVNIAERQM*LPDRSSGSFIS
Trigger: TGAGATGAAGCTTCCAGAGGAACGATCAGGCAGCAACATTTGCCGTTCTGCAATATTTACTGTTCTGCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp CGGCAATCTCCTTGGCCTTGTTGCTCTATATCCCTAATAACAGGTAACTCTGATAGACATTCCTATTCATaGGGCCACAGTATCTTCGGC +
Preference number: 4 (lower is better)
Translates to: RQSPWPCCSISLITGNSDRHSYS*GHSIFG
Trigger: GCCGAAGATACTGTGGCCTCATGAATAGGAATGTCT...ATCAGAGTTACCTGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679072.1
CDS-3UTR TCA 90 bp CAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGCCGACATTAAGGAGTGTGGAGAATGACTaGATTCCCTGTGGAGTACCT +
Preference number: 4 (lower is better)
Translates to: QYEHVTKWSPMECEPTLRSVEND*IPCGVP
Trigger: AGGTACTCCACAGGGAATTCAGTCATTCTCCACACT...CCTTAATGTCGGCTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR TCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGTCTTTCCATAGATGCTaGTTCCTGTTCCCATTTCCC +
Preference number: 4 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKSFHRC*FLFPFP
Trigger: GGGAAATGGGAACAGGAATCAGCATCTATGGAAAGA...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR TCA 90 bp CAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGCCGACATTAAGGGCCAGTATGAACATGTaGCTAAGTGGTCACCAATGG +
Preference number: 4 (lower is better)
Translates to: QYEHVTKWSPMECEPTLRASMNM*LSGHQW
Trigger: CCATTGGTGACCACTTAGTCACATGTTCATACTGGC...CCTTAATGTCGGCTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR TCA 90 bp CTTCTTGTGCCTGATCCTGCTTTGTGTTCCAGTAAGGAGGGTGAGAAAGGTCACCCAAAATGCTTGGGATaGAGTGTTTTGGATTTCAGA +
Preference number: 4 (lower is better)
Translates to: LLVPDPALCSSKEGEKGHPKCLG*SVLDFR
Trigger: TCTGAAATCCAAAACACTTCATCCCAAGCATTTTGG...GTGACCTTTCTCACCCTCCTTACTGGAACACAAAGCAGGATCAGGCACAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR TCA 90 bp AGAAATCACCCATTTTCTGTGTCGCTCACGCTGGGAGCTGTAGACTGTAGCTGTACCTTTTCTTCCACTTaGTTGAATCAGCTACTGAAG +
Preference number: 4 (lower is better)
Translates to: RNHPFSVSLTLGAVDCSCTFSST*LNQLLK
Trigger: CTTCAGTAGCTGATTCAATCAAGTGGAAGAAAAGGT...ACAGCTACAGTCTACAGCTCCCAGCGTGAGCGACACAGAAAATGGGTGATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp CGGCAATCTCCTTGGCCTTGTTGCTCTATATCCCTAATAACAGGTAACTCTGATCAACCAGCCACAAGATaGAACAATGACATGGCGAGA +
Preference number: 4 (lower is better)
Translates to: RQSPWPCCSISLITGNSDQPATR*NNDMAR
Trigger: TCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTG...ATCAGAGTTACCTGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR GCA 90 bp CGGCAATCTCCTTGGCCTTGTTGCTCTATATCCCTAATAACAGGTAACTCTGATCTTACACTAGTGATTTaGCAAGGGCTCTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: RQSPWPCCSISLITGNSDLTLVI*QGLSGL
Trigger: AAGGCCTGAGAGCCCTTGGCAAATCACTAGTGTAAG...ATCAGAGTTACCTGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR GCA 90 bp GTCCATGTGTGGCTCTGTCTGCAGCACCATTTGGGGTTTGATTGCTTCTATGCCGCTCCAAATTTTGTTTaGAGGAGTATACCTTACTCA +
Preference number: 4 (lower is better)
Translates to: VHVWLCLQHHLGFDCFYAAPNFV*RSIPYS
Trigger: TGAGTAAGGTATACTCCTGCAAACAAAATTTGGAGC...GGCATAGAAGCAATCAAACCCCAAATGGTGCTGCAGACAGAGCCACACATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp ACACCCTTCTTTAGCTTGGAGAAGTTTGTTATTACCGATTATCTGAAGCCTTCTGGCAATGTCCCACCCTaGTTCAGCTCACACTCTGTG +
Preference number: 4 (lower is better)
Translates to: TPFFSLEKFVITDYLKPSGNVPP*FSSHSV
Trigger: CACAGAGTGTGAGCTGAAGCAGGGTGGGACATTGCC...AGAAGGCTTCAGATAATCGGTAATAACAAACTTCTCCAAGCTAAAGAAGGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp TTAAGAATGTTGAGTATTGGCCCCCACTCTCTTCTGGCTTGTATAGTTTCTGCTGTCAGAACCCTCAGCTaGAGGTCTGTTGGAATTTGC +
Preference number: 4 (lower is better)
Translates to: LRMLSIGPHSLLACIVSAVRTLS*RSVGIC
Trigger: GCAAATTCCAACAGACCTGCAGCTGAGGGTTCTGAC...AGCAGAAACTATACAAGCCAGAAGAGAGTGGGGGCCAATACTCAACATTCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp TCCCATCTCCTCCAACCAGCCACAAGATGCAACAATGACATGGCGAGAGAGAATTCCAATCCTGACATATaGGCAGACATTCCTATTCAT +
Preference number: 4 (lower is better)
Translates to: SHLLQPATRCNNDMARENSNPDI*ADIPIH
Trigger: ATGAATAGGAATGTCTGCCCATATGTCAGGATTGGA...ATTCTCTCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTGGAGGAGATGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGCTATATGCGACAACATaGGCAAACCTGAAGGGCATT +
Preference number: 4 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKLYATT*ANLKGI
Trigger: AATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAG...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CCA 90 bp TCGTCAAAGTCATTCTCTATCCAACTTTGTTCTGTTGCTGGCGAGGAGCTGCATGTAGTTCTCGTGCCATaGTTTTTAGCTCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: SSKSFSIQLCSVAGEELHVVLVP*FLAPSG
Trigger: ACCTGATGGAGCTAAAAACCATGGCACGAGAACTAC...ATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGGATAGAGAATGACTTTGACGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CAA 72 bp TACAATTTGGCATGTTTTTGCAGTGGCTGGTACCAGTaGTTCCTTTCCATGTTGAGTGCTTCCTTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: YNLACFCSGWYQ*FLSMLSASFRS
Trigger: GCTCCTGAAGGAAGCACTCAACATGGAAAGGAACAACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp TCCCATCTCCTCCAACCAGCCACAAGATGCAACAATGACATGGCGAGAGAGAATCACATGATCCTCTTGTaGAAGATGAGTAAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: SHLLQPATRCNNDMARENHMILL*KMSKSV
Trigger: AACACTTTTACTCATCTTTCACAAGAGGATCATGTG...ATTCTCTCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTGGAGGAGATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR TCA 90 bp CGGCAATCTCCTTGGCCTTGTTGCTCTATATCCCTAATAACAGGTAACTCTGATAGACATTCCTATTCATaGGGCCACAGTATCTCCCAT +
Preference number: 4 (lower is better)
Translates to: RQSPWPCCSISLITGNSDRHSYS*GHSISH
Trigger: ATGGGAGATACTGTGGCCTCATGAATAGGAATGTCT...ATCAGAGTTACCTGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677116.1
CDS-3UTR TCA 90 bp TCCCATCTCCTCCAACCAGCCACAAGATGCAACAATGACATGGCGAGAGAGAATGGGCATTATGCTAAGTaGAATAAGTCAATCACAGAA +
Preference number: 4 (lower is better)
Translates to: SHLLQPATRCNNDMARENGHYAK*NKSITE
Trigger: TTCTGTGATTGACTTATTTCACTTAGCATAATGCCC...ATTCTCTCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTGGAGGAGATGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR TCA 90 bp CTCCCCTGTGGCCAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGTGGTACAGTACAGGTTaGATATCTCTTCTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: LPCGQYEHVTKWSPMECEWYSTG*ISLLQN
Trigger: ATTTTGGAGAAGAGATATTCAACCTGTACTGTACCA...CTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTGGCCACAGGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR GCA 90 bp CACGCAGGTGAGGACAATGTCCTAAAATATAATGGACATCCAGAAAGAAGGAACCTAGTTTTCCTCCTTTaGTCCCGTCTAGTCACTTCG +
Preference number: 4 (lower is better)
Translates to: HAGEDNVLKYNGHPERRNLVFLL*SRLVTS
Trigger: CGAAGTGACTAGACGGGAGCAAAGGAGGAAAACTAG...GTTCCTTCTTTCTGGATGTCCATTATATTTTAGGACATTGTCCTCACCTGCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR GCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGTCCCTCTTTTCTCCTTaGCTTAATGCATGTATGGGT +
Preference number: 4 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKSLFSP*LNACMG
Trigger: ACCCATACATGCATTAAGGCAAGGAGAAAAGAGGGA...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR GCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGTACATTCCAGAGATCTaGTGCACAACACTGTGCATA +
Preference number: 4 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKYIPEI*CTTLCI
Trigger: TATGCACAGTGTTGTGCAGCAGATCTCTGGAATGTA...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR GCA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGGGGAAATGGAGAGTTaGTGTTCCGTGGGTATAGTT +
Preference number: 4 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYGEMES*CSVGIV
Trigger: AACTATACCCACGGAACAGCAACTCTCCATTTCCCC...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR GCA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTAACTTGATTGAAGGATaGAAAGTATCATTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFNLIEG*KVSFLG
Trigger: ACCCAGGAATGATACTTTGCATCCTTCAATCAAGTT...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR GCA 90 bp GTGCCTGATCCTGCTTTGTGTTCCAGTAAGGAGGGTGAGAAAGGTCACTACCAGTTTACTAGCACTGGGTaGTTTAAGATGAATGTTATC +
Preference number: 4 (lower is better)
Translates to: VPDPALCSSKEGEKGHYQFTSTG*FKMNVI
Trigger: GATAACATTCATCTTAAAGCACCCAGTGCTAGTAAA...CTGGTAGTGACCTTTCTCACCCTCCTTACTGGAACACAAAGCAGGATCAGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR GCA 90 bp GCATCTTGTTGGAGGACAGTGGTTGGGCCTCCTCTTGAGGTCAATCTAAGTGTTTACCTCAGTTGGAAATaGAGAAATCACCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: ASCWRTVVGPPLEVNLSVYLSWK*RNHPFS
Trigger: AGAAAATGGGTGATTTCTGCATTTCCAACTGAGGTA...AACACTTAGATTGACCTCAAGAGGAGGCCCAACCACTGTCCTCCAACAAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp TCCCATCTCCTCCAACCAGCCACAAGATGCAACAATGACATGGCGAGAGAGAATTTACTCTCAAGAAAGTaGGATCATGTTTCTGACCTT +
Preference number: 4 (lower is better)
Translates to: SHLLQPATRCNNDMARENLLSRK*DHVSDL
Trigger: AAGGTCAGAAACATGATCCCACTTTCTTGAGAGTAA...ATTCTCTCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTGGAGGAGATGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CCA 90 bp TCCCATCTCCTCCAACCAGCCACAAGATGCAACAATGACATGGCGAGAGAGAATGCCTTAATGCATGTATaGGTATGCTACATAATTAGC +
Preference number: 4 (lower is better)
Translates to: SHLLQPATRCNNDMARENALMHV*VCYIIS
Trigger: GCTAATTATGTAGCATACCCATACATGCATTAAGGC...ATTCTCTCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTGGAGGAGATGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CCA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTAGGGGAAGGGGGAAATaGAGAGTTGCTGTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSIRGRGK*RVAVPW
Trigger: CCACGGAACAGCAACTCTCCATTTCCCCCTTCCCCT...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CCA 90 bp CACGCAGGTGAGGACAATGTCCTAAAATATAATGGACATCCAGAAAGAAGGAACCTATTGTGTAGTCCTTaGGTAGCACTGATCTGTGGC +
Preference number: 4 (lower is better)
Translates to: HAGEDNVLKYNGHPERRNLLCSP*VALICG
Trigger: GCCACAGATCAGTGCTACCCAAGGACTACACAATAG...GTTCCTTCTTTCTGGATGTCCATTATATTTTAGGACATTGTCCTCACCTGCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR CCA 90 bp CTCCCCTGTGGCCAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGTGGGATGAAGTGTTTTaGATTTCAGATTTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPCGQYEHVTKWSPMECEWDEVF*ISDFGR
Trigger: CCTTCCAAAATCTGAAATCCAAAACACTTCATCCCA...CTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTGGCCACAGGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CCA 90 bp ATCTGTCAGCATTTGCTGGTCTGTAAAGGATTGTATTTCTCCTTGACTTATGAACTTGTTGGAGGACAGTaGTTGGGCCTCCTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: ICQHLLVCKGLYFSLTYELVGGQ*LGLLLR
Trigger: CCTCAAGAGGAGGCCCAACCACTGTCCTCCAACAAG...TTCATAAGTCAAGGAGAAATACAATCCTTTACAGACCAGCAAATGCTGACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp GAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTGCAGAAAGCCCAGTATTAAGGTaGAAGTGTCCCAATTTTCCA +
Preference number: 4 (lower is better)
Translates to: ENHYSLQSCQTGTFKSAESPVLR*KCPNFP
Trigger: TGGAAAATTGGGACACTTCCACCTTAATACTGGGCT...TTCTGCAGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CAA 72 bp CAGCACCATTTGGGGTTTGATTGCTTCTATGCCTTTTaGTTTCTTCCAAGCTGCAGGAGATCACCACTTGAT +
Preference number: 4 (lower is better)
Translates to: QHHLGFDCFYAF*FLPSCRRSPLD
Trigger: ATCAAGTGGTGATCTCCTGCAGCTTGGAAGAAACAAAAAGGCATAGAAGCAATCAAACCCCAAATGGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp CTAGAATCAATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACCAGTAGACATTCCTATTCATaGGGCCACAGTATCTTCGGC +
Preference number: 4 (lower is better)
Translates to: LESMVFTIWHVFAVAGTSRHSYS*GHSIFG
Trigger: GCCGAAGATACTGTGGCCTCATGAATAGGAATGTCT...ACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATTGATTCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676885.1
CDS-3UTR TCA 90 bp CAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGCCGACATTAAGGCATTATTTCCAATCCTaGCATATGGGCAGACATTCC +
Preference number: 4 (lower is better)
Translates to: QYEHVTKWSPMECEPTLRHYFQS*HMGRHS
Trigger: GGAATGTCTGCCCATATGTCAGGATTGGAAATAATG...CCTTAATGTCGGCTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR TCA 90 bp GTTCAAACTAAAAAGGGCAAGAAAACTGTCCGTCCTTTCTATTGTGTAGTCCTTAGGCAGTGTGGAGAATaGCTGAATTCCCTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: VQTKKGKKTVRPFYCVVLRQCGE*LNSLWS
Trigger: ACTCCACAGGGAATTCAGTCATTCTCCACACTGCCT...AAGGACTACACAATAGAAAGGACGGACAGTTTTCTTGCCCTTTTTAGTTTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR TCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGGACTCTAGGGCAACATaGAATCAAGAGCATTCTTTT +
Preference number: 4 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKDSRAT*NQEHSF
Trigger: AAAAGAATGCTCTTGATTTCATGTTGCCCTAGAGTC...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR TCA 90 bp TGGTACCAGTTGTTCCTTTCCATGTTGAGTGCTTCCTTCAGGAGCTCTTGTAAGTTGATCTTCAGTCACTaGTACCTTTTCTTCCACTTG +
Preference number: 4 (lower is better)
Translates to: WYQLFLSMLSASFRSSCKLIFSH*YLFFHL
Trigger: CAAGTGGAAGAAAAGGTATCAGTGACTGAAGATCAA...CTTACAAGAGCTCCTGAAGGAAGCACTCAACATGGAAAGGAACAACTGGTACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp TCCCATCTCCTCCAACCAGCCACAAGATGCAACAATGACATGGCGAGAGAGAATCATCACTTAGTGCAATaGTTTCATCAAAATGGATCT +
Preference number: 4 (lower is better)
Translates to: SHLLQPATRCNNDMARENHHLVQ*FHQNGS
Trigger: AGATCCATTTTGATGAAAGCATTGCACTAAGTGATG...ATTCTCTCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTGGAGGAGATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR GCA 90 bp CGGCAATCTCCTTGGCCTTGTTGCTCTATATCCCTAATAACAGGTAACTCTGATTACATTCCAGAGATCTaGTGCACAACACTGTGCATA +
Preference number: 4 (lower is better)
Translates to: RQSPWPCCSISLITGNSDYIPEI*CTTLCI
Trigger: TATGCACAGTGTTGTGCAGCAGATCTCTGGAATGTA...ATCAGAGTTACCTGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR GCA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTTTCATCTTTCTCCTGTaGTGGGTGCTTCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSIFIFLL*WVLPAL
Trigger: GAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR GCA 90 bp ATTATTAGGATTCTCTGTTATAGCAGCCTGGCCTTACCTCAACTAATTCAAAAGAGCCTTGGGGAAACATaGTGCCCCCATGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: IIRILCYSSLALPQLIQKSLGET*CPHVLL
Trigger: GAGAAGAACATGGGGGCAGCATGTTTCCCCAAGGCT...CTTTTGAATTAGTTGAGGTAAGGCCAGGCTGCTATAACAGAGAATCCTAATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR GCA 90 bp TGCTGGGAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTGCTCCAAATTTTGTTTaGAGGAGTATACCTTACTCA +
Preference number: 4 (lower is better)
Translates to: CWENHYSLQSCQTGTFKSAPNFV*RSIPYS
Trigger: TGAGTAAGGTATACTCCTGCAAACAAAATTTGGAGC...AGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTCCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp AGCCCAGTATTAAGGTGGAAGTGTCCCAATTTTCCAGGTACTGTCTGTCATGGCAGACAGAAACAAACGTaGTCCAAATTTTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: SPVLRWKCPNFPGTVCHGRQKQT*SKFCLQ
Trigger: CTGCAAACAAAATTTGGAGCACGTTTGTTTCTGTCT...GCCATGACAGACAGTACCTGGAAAATTGGGACACTTCCACCTTAATACTGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp GCATCTTGTTGGAGGACAGTGGTTGGGCCTCCTCTTGAGGTCAATCTAAGTGTTCATTTGGGGTTTGATTaGTTCTATGCCTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: ASCWRTVVGPPLEVNLSVHLGFD*FYAFLF
Trigger: AAACAAAAAGGCATAGAAGCAATCAAACCCCAAATG...AACACTTAGATTGACCTCAAGAGGAGGCCCAACCACTGTCCTCCAACAAGATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp ACAGTCAGAACCCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTAAATCTGTCAGCATTTaGTGGTCTGTAAAGGATTGT +
Preference number: 4 (lower is better)
Translates to: TVRTLSCRSVGICWKSSFKSVSI*WSVKDC
Trigger: ACAATCCTTTACAGACCAGCAAATGCTGACAGATTT...AAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGGGTTCTGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp GTATTAAGGTGGAAGTGTCCCAATTTTCCAGGTACTGTCTGTCATGGCTTCCCTTCCAATCCTGACATATaGGCAGACATTCCTATTCAT +
Preference number: 4 (lower is better)
Translates to: VLRWKCPNFPGTVCHGFPSNPDI*ADIPIH
Trigger: ATGAATAGGAATGTCTGCCCATATGTCAGGATTGGA...AGGGAAGCCATGACAGACAGTACCTGGAAAATTGGGACACTTCCACCTTAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676885.1
CDS-3UTR CCA 90 bp ACACCCTTCTTTAGCTTGGAGAAGTTTGTTATTACCGATTATCTGAAGCCTTCTCAGCTGCAGGTCTGTTaGAATTTGCTGGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: TPFFSLEKFVITDYLKPSQLQVC*NLLEVQ
Trigger: CTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTG...AGAAGGCTTCAGATAATCGGTAATAACAAACTTCTCCAAGCTAAAGAAGGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp ACTTCTAGAGGAACCAGGCAGACAGAAACAAACGTGCTCCAAATTTTGTTTGCAATGGTGATGTACAGATaGGGTTTTGGTGTGGATGTC +
Preference number: 4 (lower is better)
Translates to: TSRGTRQTETNVLQILFAMVMYR*GFGVDV
Trigger: GACATCCACACCAAAACCCCATCTGTACATCACCAT...TGCAAACAAAATTTGGAGCACGTTTGTTTCTGTCTGCCTGGTTCCTCTAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATCATTATTTCCAATCCTaGCATATGGGCAGACATTCC +
Preference number: 4 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYHYFQS*HMGRHS
Trigger: GGAATGTCTGCCCATATGTCAGGATTGGAAATAATG...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR TCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGCACATGATCCTCTTGTaGAAGATGAGTAAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKHMILL*KMSKSV
Trigger: AACACTTTTACTCATCTTTCACAAGAGGATCATGTG...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR TCA 90 bp GATGAATGTTATCAAACCAAGGCAGTGTTGGTACAGTACAGGTTGAATATCTCTAGTGTGGAGAATGACTaGATTCCCTGTGGAGTACCT +
Preference number: 4 (lower is better)
Translates to: DECYQTKAVLVQYRLNISSVEND*IPCGVP
Trigger: AGGTACTCCACAGGGAATTCAGTCATTCTCCACACT...AGAGATATTCAACCTGTACTGTACCAACACTGCCTTGGTTTGATAACATTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR TCA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTGTGGGATCATGTTTCTaGCCTTTGATACAGCACCCC +
Preference number: 4 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSIVGSCF*PLIQHP
Trigger: GGGGTGCTGTATCAAAGGTCAGAAACATGATCCCAC...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR TCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGGGGCATTATGCTAAGTaGAATAAGTCAATCACAGAA +
Preference number: 4 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKGHYAK*NKSITE
Trigger: TTCTGTGATTGACTTATTTCACTTAGCATAATGCCC...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR TCA 90 bp CGGCAATCTCCTTGGCCTTGTTGCTCTATATCCCTAATAACAGGTAACTCTGATGACTCTAGGGCAACATaGAATCAAGAGCATTCTTTT +
Preference number: 4 (lower is better)
Translates to: RQSPWPCCSISLITGNSDDSRAT*NQEHSF
Trigger: AAAAGAATGCTCTTGATTTCATGTTGCCCTAGAGTC...ATCAGAGTTACCTGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR GCA 90 bp CGGCAATCTCCTTGGCCTTGTTGCTCTATATCCCTAATAACAGGTAACTCTGATTCTCCTTGGCCTTGTTaGTCTATATCCCTAATAACA +
Preference number: 4 (lower is better)
Translates to: RQSPWPCCSISLITGNSDSPWPC*SISLIT
Trigger: TGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGA...ATCAGAGTTACCTGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR GCA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTCCTTGCTCCTCAGCTTaGAGACGGTCTATTGTGAGA +
Preference number: 4 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSIPCSSA*RRSIVR
Trigger: TCTCACAATAGACCGTCTGCAAGCTGAGGAGCAAGG...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR GCA 90 bp CAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGCCGACATTAAGGCTTAACAACTTCTTGTaGCTGATCCTGCTTTGTGTT +
Preference number: 4 (lower is better)
Translates to: QYEHVTKWSPMECEPTLRLNNFL*LILLCV
Trigger: AACACAAAGCAGGATCAGGCACAAGAAGTTGTTAAG...CCTTAATGTCGGCTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR GCA 90 bp CTAGAATCAATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACCAGTTGCAGAAGTTTCTGCTaGCTTTTGTTCAGCTATGCC +
Preference number: 4 (lower is better)
Translates to: LESMVFTIWHVFAVAGTSCRSFC*LLFSYA
Trigger: GGCATAGCTGAACAAAAGGCAGCAGAAACTTCTGCA...ACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATTGATTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp CGGCAATCTCCTTGGCCTTGTTGCTCTATATCCCTAATAACAGGTAACTCTGATTCCAATCCTGACATATaGGCAGACATTCCTATTCAT +
Preference number: 4 (lower is better)
Translates to: RQSPWPCCSISLITGNSDSNPDI*ADIPIH
Trigger: ATGAATAGGAATGTCTGCCCATATGTCAGGATTGGA...ATCAGAGTTACCTGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CCA 90 bp CAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGCCGACATTAAGGAAAATCAAGGCAGTGTaGAGAATGACTGAATTCCCT +
Preference number: 4 (lower is better)
Translates to: QYEHVTKWSPMECEPTLRKIKAV*RMTEFP
Trigger: AGGGAATTCAGTCATTCTCCACACTGCCTTGATTTT...CCTTAATGTCGGCTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR CCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGGCCTTAATGCATGTATaGGTATGCTACATAATTAGC +
Preference number: 4 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKALMHV*VCYIIS
Trigger: GCTAATTATGTAGCATACCCATACATGCATTAAGGC...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGAAGTTCTTCAGCTTTTaGACTCTTGGACTTACACTA +
Preference number: 4 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKKFFSF*TLGLTL
Trigger: TAGTGTAAGTCCAAGAGTCCAAAAGCTGAAGAACTT...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CCA 90 bp CACAGAAAGAAACCATCATCTCTAATCCCAAAATGGCCTTTCAGTAAGCCCTTCTCTCTAATCCCAAAATaGCCTTTCAGTAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: HRKKPSSLIPKWPFSKPFSLIPK*PFSKPF
Trigger: GAAGGGCTTACTGAAAGGCCATTTTGGGATTAGAGA...GAAGGGCTTACTGAAAGGCCATTTTGGGATTAGAGATGATGGTTTCTTTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CCA 90 bp ATTGCTTCTATGCCTTTTTGTTTCTTCCAAGCTGCAGGAGATCACCACTTGATTGTCTGCAGCACCATTTaGGGTTTGATTGCTTCTATG +
Preference number: 4 (lower is better)
Translates to: IASMPFCFFQAAGDHHLIVCSTI*GLIASM
Trigger: CATAGAAGCAATCAAACCCCAAATGGTGCTGCAGAC...AATCAAGTGGTGATCTCCTGCAGCTTGGAAGAAACAAAAAGGCATAGAAGCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp ACACCCTTCTTTAGCTTGGAGAAGTTTGTTATTACCGATTATCTGAAGCCTTCTTCCGCTTTTCTGCTCTaGTTTCTCCCCATCTTTGTG +
Preference number: 4 (lower is better)
Translates to: TPFFSLEKFVITDYLKPSSAFLL*FLPIFV
Trigger: CACAAAGATGGGGAGAAACCAGAGCAGAAAAGCGGA...AGAAGGCTTCAGATAATCGGTAATAACAAACTTCTCCAAGCTAAAGAAGGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp ACACCCTTCTTTAGCTTGGAGAAGTTTGTTATTACCGATTATCTGAAGCCTTCTGAGTGTTTTCCAGCTTaGTTCCATTCTCCCCGTCAT +
Preference number: 4 (lower is better)
Translates to: TPFFSLEKFVITDYLKPSECFPA*FHSPRH
Trigger: ATGACGGGGAGAATGGAACCAAGCTGGAAAACACTC...AGAAGGCTTCAGATAATCGGTAATAACAAACTTCTCCAAGCTAAAGAAGGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp TTGGTGACAAAATCTGTCAGCATTTGCTGGTCTGTAAAGGATTGTATTTCTCCTGGCATGTTTTTGCAGTaGCTGGTACCAGTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LVTKSVSICWSVKDCISPGMFLQ*LVPVVP
Trigger: AGGAACAACTGGTACCAGCCACTGCAAAAACATGCC...AGGAGAAATACAATCCTTTACAGACCAGCAAATGCTGACAGATTTTGTCACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp TCGTCAAAGTCATTCTCTATCCAACTTTGTTCTGTTGCTGGCGAGGAGCTGCATATGGTCTTTACAATTTaGCATGTTTTTGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSKSFSIQLCSVAGEELHMVFTI*HVFAVA
Trigger: AGCCACTGCAAAAACATGCCAAATTGTAAAGACCAT...ATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGGATAGAGAATGACTTTGACGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp CAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGCCGACATTAAGGGTTCTCACTCATACGTaGGAATTGAACAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: QYEHVTKWSPMECEPTLRVLTHT*ELNNEN
Trigger: GTTCTCATTGTTCAATTCCCACGTATGAGTGAGAAC...CCTTAATGTCGGCTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678950.1
CDS-3UTR CCA 90 bp CAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGCCGACATTAAGGACAATAGCAAATTGTTaGAACCAGCCCAAATGTCCA +
Preference number: 4 (lower is better)
Translates to: QYEHVTKWSPMECEPTLRTIANC*NQPKCP
Trigger: TGGACATTTGGGCTGGTTCCAACAATTTGCTATTGT...CCTTAATGTCGGCTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678950.1
3UTR CAA 72 bp GGGATGAAGTGTTTTGGATTTCAGATTTTGGAAGGGTaGCAGAATATATACGAGTTGAGCATCCCTAATCCC +
Preference number: 4 (lower is better)
Translates to: GMKCFGFQILEG*QNIYELSIPNP
Trigger: GGGATTAGGGATGCTCAACTCGTATATATTCTGCAACCCTTCCAAAATCTGAAATCCAAAACACTTCATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR TCA 90 bp AGAATGTTGAGTATTGGCCCCCACTCTCTTCTGGCTTGTATAGTTTCTGCTGAACAGCAGCAAATCTTGTaGAAGATGAGTAAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: RMLSIGPHSLLACIVSAEQQQIL*KMSKSV
Trigger: AACACTTTTACTCATCTTTCACAAGATTTGCTGCTG...TTCAGCAGAAACTATACAAGCCAGAAGAGAGTGGGGGCCAATACTCAACATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676885.1
CDS-3UTR TCA 90 bp GTTCAAACTAAAAAGGGCAAGAAAACTGTCCGTCCTTTCTATTGTGTAGTCCTTAGACATTCCTATTCATaGGGCCACAGTATCTCCCAT +
Preference number: 4 (lower is better)
Translates to: VQTKKGKKTVRPFYCVVLRHSYS*GHSISH
Trigger: ATGGGAGATACTGTGGCCTCATGAATAGGAATGTCT...AAGGACTACACAATAGAAAGGACGGACAGTTTTCTTGCCCTTTTTAGTTTGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000679022.1
CDS-3UTR TCA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTAGACATTCCTATTCATaGGGCCACAGTATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSIRHSYS*GHSISR
Trigger: CCTGGAGATACTGTGGCCTCATGAATAGGAATGTCT...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678480.1
CDS-3UTR TCA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGACTCTAGGGCAACATaGAATCAAGAGCATTCTTTT +
Preference number: 4 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYDSRAT*NQEHSF
Trigger: AAAAGAATGCTCTTGATTTCATGTTGCCCTAGAGTC...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR TCA 90 bp ATTATTAGGATTCTCTGTTATAGCAGCCTGGCCTTACCTCAACTAATTCAAAAGGCCAGTATGAACATGTaGCTAAGTGGTCACCAATGG +
Preference number: 4 (lower is better)
Translates to: IIRILCYSSLALPQLIQKASMNM*LSGHQW
Trigger: CCATTGGTGACCACTTAGTCACATGTTCATACTGGC...CTTTTGAATTAGTTGAGGTAAGGCCAGGCTGCTATAACAGAGAATCCTAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR TCA 90 bp GATGAATGTTATCAAACCAAGGCAGTGTTGGTACAGTACAGGTTGAATATCTCTTCCATAATGCTCCAATaGGCATTGCCTTTGAGCATC +
Preference number: 4 (lower is better)
Translates to: DECYQTKAVLVQYRLNISSIMLQ*ALPLSI
Trigger: GATGCTCAAAGGCAATGCTCATTGGAGCATTATGGA...AGAGATATTCAACCTGTACTGTACCAACACTGCCTTGGTTTGATAACATTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR TCA 90 bp GTTCAAACTAAAAAGGGCAAGAAAACTGTCCGTCCTTTCTATTGTGTAGTCCTTTCCATAATGCTCCAATaGGCATTGCCTTTGAGCATC +
Preference number: 4 (lower is better)
Translates to: VQTKKGKKTVRPFYCVVLSIMLQ*ALPLSI
Trigger: GATGCTCAAAGGCAATGCTCATTGGAGCATTATGGA...AAGGACTACACAATAGAAAGGACGGACAGTTTTCTTGCCCTTTTTAGTTTGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR GCA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGACTCTGATAAATGAGTaGACACATGTAAATTTCCAC +
Preference number: 4 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKTLINE*THVNFH
Trigger: GTGGAAATTTACATGTGTGCACTCATTTATCAGAGT...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR GCA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTGGGGAAATGGAGAGTTaGTGTTCCGTGGGTATAGTT +
Preference number: 4 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSIGEMES*CSVGIV
Trigger: AACTATACCCACGGAACAGCAACTCTCCATTTCCCC...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR GCA 90 bp GAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTGCAGAAGTTAGCTGGTTATTTTaGTCATTAGTTGATGCAGTT +
Preference number: 4 (lower is better)
Translates to: ENHYSLQSCQTGTFKSAEVSWLF*SLVDAV
Trigger: AACTGCATCAACTAATGAGCAAAATAACCAGCTAAC...TTCTGCAGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp AGGAGTATCTCTGTGGCGTTTTCTGTATGTCCTGAATTTGAATGTTGGCCTGCCGTTAGCTGGTTATTTTaGTCATTAGTTGATGCAGTT +
Preference number: 4 (lower is better)
Translates to: RSISVAFSVCPEFECWPAVSWLF*SLVDAV
Trigger: AACTGCATCAACTAATGAGCAAAATAACCAGCTAAC...GGCAGGCCAACATTCAAATTCAGGACATACAGAAAACGCCACAGAGATACTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp CACGCAGGTGAGGACAATGTCCTAAAATATAATGGACATCCAGAAAGAAGGAACACTGGATTAAGAAAATaGGGCACATATACACCATGG +
Preference number: 4 (lower is better)
Translates to: HAGEDNVLKYNGHPERRNTGLRK*GTYTPW
Trigger: CCATGGTGTATATGTGCCGCATTTTCTTAATCCAGT...GTTCCTTCTTTCTGGATGTCCATTATATTTTAGGACATTGTCCTCACCTGCGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678950.1
CDS-3UTR CCA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTCTACTTTTGAGGTACTaGGACTCTGACTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSILLLRY*DSDWLP
Trigger: AGGAAGCCAGTCAGAGTCCCAGTACCTCAAAAGTAG...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CCA 90 bp CGGCAATCTCCTTGGCCTTGTTGCTCTATATCCCTAATAACAGGTAACTCTGATAAGTTCTTCAGCTTTTaGACTCTTGGACTTACACTA +
Preference number: 4 (lower is better)
Translates to: RQSPWPCCSISLITGNSDKFFSF*TLGLTL
Trigger: TAGTGTAAGTCCAAGAGTCCAAAAGCTGAAGAACTT...ATCAGAGTTACCTGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CCA 90 bp CAGTATGAACATGTGACTAAGTGGTCACCAATGGAATGTGAGCCGACATTAAGGCTTCTCCAAAATGCTTaGGATGAAGTGTTTTGGATT +
Preference number: 4 (lower is better)
Translates to: QYEHVTKWSPMECEPTLRLLQNA*DEVFWI
Trigger: AATCCAAAACACTTCATCCCAAGCATTTTGGAGAAG...CCTTAATGTCGGCTCACATTCCATTGGTGACCACTTAGTCACATGTTCATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CCA 90 bp CTAGAATCAATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACCAGTAGCCCAGTATTAAGGTaGAAGTGTCCCAATTTTCCA +
Preference number: 4 (lower is better)
Translates to: LESMVFTIWHVFAVAGTSSPVLR*KCPNFP
Trigger: TGGAAAATTGGGACACTTCCACCTTAATACTGGGCT...ACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATTGATTCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp ATTGCTTCTATGCCTTTTTGTTTCTTCCAAGCTGCAGGAGATCACCACTTGATTTATCAAACTCCATGCTaGGAGAACCACTACTCTCTT +
Preference number: 4 (lower is better)
Translates to: IASMPFCFFQAAGDHHLIYQTPC*ENHYSL
Trigger: AAGAGAGTAGTGGTTCTCCCAGCATGGAGTTTGATA...AATCAAGTGGTGATCTCCTGCAGCTTGGAAGAAACAAAAAGGCATAGAAGCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp TCGTCAAAGTCATTCTCTATCCAACTTTGTTCTGTTGCTGGCGAGGAGCTGCATGTTTTTATCTACCTTTaGTCTTTGATGATGGTGATG +
Preference number: 4 (lower is better)
Translates to: SSKSFSIQLCSVAGEELHVFIYL*SLMMVM
Trigger: CATCACCATCATCAAAGACCAAAGGTAGATAAAAAC...ATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGGATAGAGAATGACTTTGACGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp CTAAGACCATTGGAAAAGCCCAGTATTAAGGTGGAAGTGTCCCAATTTTCCAGGTCTGTCAGCATTTGCTaGTCTGTAAAGGATTGTATT +
Preference number: 4 (lower is better)
Translates to: LRPLEKPSIKVEVSQFSRSVSIC*SVKDCI
Trigger: AATACAATCCTTTACAGACCAGCAAATGCTGACAGA...CCTGGAAAATTGGGACACTTCCACCTTAATACTGGGCTTTTCCAATGGTCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp CACAGAAAGAAACCATCATCTCTAATCCCAAAATGGCCTTTCAGTAAGCCCTTCCCATCAATGATAGACTaGATTAAGAAAATGCGGCAC +
Preference number: 4 (lower is better)
Translates to: HRKKPSSLIPKWPFSKPFPSMID*IKKMRH
Trigger: GTGCCGCATTTTCTTAATCCAGTCTATCATTGATGG...GAAGGGCTTACTGAAAGGCCATTTTGGGATTAGAGATGATGGTTTCTTTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678950.1
CDS-3UTR TCA 90 bp CACGCAGGTGAGGACAATGTCCTAAAATATAATGGACATCCAGAAAGAAGGAACCACATGATCCTCTTGTaGAAGATGAGTAAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: HAGEDNVLKYNGHPERRNHMILL*KMSKSV
Trigger: AACACTTTTACTCATCTTTCACAAGAGGATCATGTG...GTTCCTTCTTTCTGGATGTCCATTATATTTTAGGACATTGTCCTCACCTGCGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR GCA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATAACTTGATTGAAGGATaGAAAGTATCATTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYNLIEG*KVSFLG
Trigger: ACCCAGGAATGATACTTTGCATCCTTCAATCAAGTT...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR GCA 90 bp TTAAGAATGTTGAGTATTGGCCCCCACTCTCTTCTGGCTTGTATAGTTTCTGCTAAATCTGTCAGCATTTaGTGGTCTGTAAAGGATTGT +
Preference number: 4 (lower is better)
Translates to: LRMLSIGPHSLLACIVSAKSVSI*WSVKDC
Trigger: ACAATCCTTTACAGACCAGCAAATGCTGACAGATTT...AGCAGAAACTATACAAGCCAGAAGAGAGTGGGGGCCAATACTCAACATTCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp ATTATTAGGATTCTCTGTTATAGCAGCCTGGCCTTACCTCAACTAATTCAAAAGGCCATGTCTACTGGCTaGTCCAATAACTTTTATGGC +
Preference number: 4 (lower is better)
Translates to: IIRILCYSSLALPQLIQKAMSTG*SNNFYG
Trigger: GCCATAAAAGTTATTGGACCAGCCAGTAGACATGGC...CTTTTGAATTAGTTGAGGTAAGGCCAGGCTGCTATAACAGAGAATCCTAATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR TCA 90 bp GACAGAAACAAACGTGCTCCAAATTTTGTTTGCAGGAGTATACCTTACTCAATTCATTATTTCCAATCCTaGCATATGGGCAGACATTCC +
Preference number: 4 (lower is better)
Translates to: DRNKRAPNFVCRSIPYSIHYFQS*HMGRHS
Trigger: GGAATGTCTGCCCATATGTCAGGATTGGAAATAATG...AATTGAGTAAGGTATACTCCTGCAAACAAAATTTGGAGCACGTTTGTTTCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676885.1
CDS-3UTR TCA 90 bp CCACCATATATGGGGTCTCAACTTGATTTATACTGCTATTTGATAGATTCCAGAAGACATTCCTATTCATaGGGCCACAGTATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: PPYMGSQLDLYCYLIDSRRHSYS*GHSICS
Trigger: TGAACAGATACTGTGGCCTCATGAATAGGAATGTCT...TCTGGAATCTATCAAATAGCAGTATAAATCAAGTTGAGACCCCATATATGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678950.1
CDS-3UTR TCA 90 bp GTTCAAACTAAAAAGGGCAAGAAAACTGTCCGTCCTTTCTATTGTGTAGTCCTTATTCAAAAAGCATATTaGAAAGTGGCTGTCCCTACC +
Preference number: 4 (lower is better)
Translates to: VQTKKGKKTVRPFYCVVLIQKAY*KVAVPT
Trigger: GGTAGGGACAGCCACTTTTCAATATGCTTTTTGAAT...AAGGACTACACAATAGAAAGGACGGACAGTTTTCTTGCCCTTTTTAGTTTGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR GCA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATACTCTGATAAATGAGTaGACACATGTAAATTTCCAC +
Preference number: 4 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYTLINE*THVNFH
Trigger: GTGGAAATTTACATGTGTGCACTCATTTATCAGAGT...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR GCA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTTCCCTCTTTTCTCCTTaGCTTAATGCATGTATGGGT +
Preference number: 4 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSISLFSP*LNACMG
Trigger: ACCCATACATGCATTAAGGCAAGGAGAAAAGAGGGA...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR GCA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTTACATTCCAGAGATCTaGTGCACAACACTGTGCATA +
Preference number: 4 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSIYIPEI*CTTLCI
Trigger: TATGCACAGTGTTGTGCAGCAGATCTCTGGAATGTA...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR GCA 90 bp GTTCAAACTAAAAAGGGCAAGAAAACTGTCCGTCCTTTCTATTGTGTAGTCCTTCTTAACAACTTCTTGTaGCTGATCCTGCTTTGTGTT +
Preference number: 4 (lower is better)
Translates to: VQTKKGKKTVRPFYCVVLLNNFL*LILLCV
Trigger: AACACAAAGCAGGATCAGGCACAAGAAGTTGTTAAG...AAGGACTACACAATAGAAAGGACGGACAGTTTTCTTGCCCTTTTTAGTTTGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR GCA 90 bp CACGCAGGTGAGGACAATGTCCTAAAATATAATGGACATCCAGAAAGAAGGAACCCTTCAGGACCCATTTaGTATAAACTAATGATTATG +
Preference number: 4 (lower is better)
Translates to: HAGEDNVLKYNGHPERRNPSGPI*YKLMIM
Trigger: CATAATCATTAGTTTATAGCAAATGGGTCCTGAAGG...GTTCCTTCTTTCTGGATGTCCATTATATTTTAGGACATTGTCCTCACCTGCGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR GCA 90 bp AGAATCAATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACCAGTTGTACCTCAGTTGGAAATaGAGAAATCACCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: RINGLYNLACFCSGWYQLYLSWK*RNHPFS
Trigger: AGAAAATGGGTGATTTCTGCATTTCCAACTGAGGTA...CAACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATTGATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp GATGAATGTTATCAAACCAAGGCAGTGTTGGTACAGTACAGGTTGAATATCTCTTCCAATCCTGACATATaGGCAGACATTCCTATTCAT +
Preference number: 4 (lower is better)
Translates to: DECYQTKAVLVQYRLNISSNPDI*ADIPIH
Trigger: ATGAATAGGAATGTCTGCCCATATGTCAGGATTGGA...AGAGATATTCAACCTGTACTGTACCAACACTGCCTTGGTTTGATAACATTCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CCA 90 bp GATGAATGTTATCAAACCAAGGCAGTGTTGGTACAGTACAGGTTGAATATCTCTAAAATCAAGGCAGTGTaGAGAATGACTGAATTCCCT +
Preference number: 4 (lower is better)
Translates to: DECYQTKAVLVQYRLNISKIKAV*RMTEFP
Trigger: AGGGAATTCAGTCATTCTCCACACTGCCTTGATTTT...AGAGATATTCAACCTGTACTGTACCAACACTGCCTTGGTTTGATAACATTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CCA 90 bp CCACCATATATGGGGTCTCAACTTGATTTATACTGCTATTTGATAGATTCCAGATCTCTAATCCCAAAATaGCCTTTCAGTAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PPYMGSQLDLYCYLIDSRSLIPK*PFSKPF
Trigger: GAAGGGCTTACTGAAAGGCCATTTTGGGATTAGAGA...TCTGGAATCTATCAAATAGCAGTATAAATCAAGTTGAGACCCCATATATGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CCA 90 bp ACTTCTAGAGGAACCAGGCAGACAGAAACAAACGTGCTCCAAATTTTGTTTGCAGTTTTTATCTACCTTTaGTCTTTGATGATGGTGATG +
Preference number: 4 (lower is better)
Translates to: TSRGTRQTETNVLQILFAVFIYL*SLMMVM
Trigger: CATCACCATCATCAAAGACCAAAGGTAGATAAAAAC...TGCAAACAAAATTTGGAGCACGTTTGTTTCTGTCTGCCTGGTTCCTCTAGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp GTTCAAACTAAAAAGGGCAAGAAAACTGTCCGTCCTTTCTATTGTGTAGTCCTTCACATGATCCTCTTGTaGAAGATGAGTAAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: VQTKKGKKTVRPFYCVVLHMILL*KMSKSV
Trigger: AACACTTTTACTCATCTTTCACAAGAGGATCATGTG...AAGGACTACACAATAGAAAGGACGGACAGTTTTCTTGCCCTTTTTAGTTTGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR TCA 90 bp ATCTGTCAGCATTTGCTGGTCTGTAAAGGATTGTATTTCTCCTTGACTTATGAAGAGAGAGAGACTCTCTaGTTTTTAGAATTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: ICQHLLVCKGLYFSLTYEERETL*FLEFSA
Trigger: AGCGGAAAATTCTAAAAATCAGAGAGTCTCTCTCTC...TTCATAAGTCAAGGAGAAATACAATCCTTTACAGACCAGCAAATGCTGACAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR TCA 90 bp GACAGAAACAAACGTGCTCCAAATTTTGTTTGCAGGAGTATACCTTACTCAATTGAGAGAGAGACTCTCTaGTTTTTAGAATTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: DRNKRAPNFVCRSIPYSIERETL*FLEFSA
Trigger: AGCGGAAAATTCTAAAAATCAGAGAGTCTCTCTCTC...AATTGAGTAAGGTATACTCCTGCAAACAAAATTTGGAGCACGTTTGTTTCTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp ATCCCCAAATCTGAAATCCATAATGCTCCAATGAGCATTGCCTTTGAGCATCATAAAAATACAGAAGCATaGAGCATTTCTTTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: IPKSEIHNAPMSIAFEHHKNTEA*SISLKG
Trigger: TCCCTTCAAAGAAATGCTGCATGCTTCTGTATTTTT...ATGATGCTCAAAGGCAATGCTCATTGGAGCATTATGGATTTCAGATTTGGGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR GCA 90 bp TTGGTGACAAAATCTGTCAGCATTTGCTGGTCTGTAAAGGATTGTATTTCTCCTAGACAGAAACAAACGTaGTCCAAATTTTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LVTKSVSICWSVKDCISPRQKQT*SKFCLQ
Trigger: CTGCAAACAAAATTTGGAGCACGTTTGTTTCTGTCT...AGGAGAAATACAATCCTTTACAGACCAGCAAATGCTGACAGATTTTGTCACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CCA 90 bp CCACCATATATGGGGTCTCAACTTGATTTATACTGCTATTTGATAGATTCCAGAAAAATCAAGGCAGTGTaGAGAATGACTGAATTCCCT +
Preference number: 4 (lower is better)
Translates to: PPYMGSQLDLYCYLIDSRKIKAV*RMTEFP
Trigger: AGGGAATTCAGTCATTCTCCACACTGCCTTGATTTT...TCTGGAATCTATCAAATAGCAGTATAAATCAAGTTGAGACCCCATATATGGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CCA 90 bp AAATTCTTTTCTTTAAGAATGTTGAGTATTGGCCCCCACTCTCTTCTGGCTTGTATGGTCTTTACAATTTaGCATGTTTTTGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: KFFSLRMLSIGPHSLLACMVFTI*HVFAVA
Trigger: AGCCACTGCAAAAACATGCCAAATTGTAAAGACCAT...ACAAGCCAGAAGAGAGTGGGGGCCAATACTCAACATTCTTAAAGAAAAGAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
3UTR CAA 72 bp AAAATGCTTGGGATGAAGTGTTTTGGATTTCAGATTTaGGAAGGGTTGCAGAATATATACGAGTTGAGCATC +
Preference number: 4 (lower is better)
Translates to: KMLGMKCFGFQI*EGLQNIYELSI
Trigger: GATGCTCAACTCGTATATATTCTGCAACCCTTCCAAAATCTGAAATCCAAAACACTTCATCCCAAGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR TCA 90 bp ATTATTAGGATTCTCTGTTATAGCAGCCTGGCCTTACCTCAACTAATTCAAAAGCACATGATCCTCTTGTaGAAGATGAGTAAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: IIRILCYSSLALPQLIQKHMILL*KMSKSV
Trigger: AACACTTTTACTCATCTTTCACAAGAGGATCATGTG...CTTTTGAATTAGTTGAGGTAAGGCCAGGCTGCTATAACAGAGAATCCTAATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR TCA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTCACATGATCCTCTTGTaGAAGATGAGTAAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSIHMILL*KMSKSV
Trigger: AACACTTTTACTCATCTTTCACAAGAGGATCATGTG...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR GCA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTATGCATGTATGGGTATaGTACATAATTAGCGCTTCA +
Preference number: 4 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSIMHVWV*YIISAS
Trigger: TGAAGCGCTAATTATGTAGCATACCCATACATGCAT...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR GCA 90 bp GTTCAAACTAAAAAGGGCAAGAAAACTGTCCGTCCTTTCTATTGTGTAGTCCTTCCTTCAGGACCCATTTaGTATAAACTAATGATTATG +
Preference number: 4 (lower is better)
Translates to: VQTKKGKKTVRPFYCVVLPSGPI*YKLMIM
Trigger: CATAATCATTAGTTTATAGCAAATGGGTCCTGAAGG...AAGGACTACACAATAGAAAGGACGGACAGTTTTCTTGCCCTTTTTAGTTTGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CCA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTTTACTCTCAAGAAAGTaGGATCATGTTTCTGACCTT +
Preference number: 4 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSILLSRK*DHVSDL
Trigger: AAGGTCAGAAACATGATCCCACTTTCTTGAGAGTAA...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CCA 90 bp GAGAAAGCAATCTATAATTCAAAAAGCATATTGAAAAGTGGCTGTCCCTACCAGTGGGATGAAGTGTTTTaGATTTCAGATTTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: EKAIYNSKSILKSGCPYQWDEVF*ISDFGR
Trigger: CCTTCCAAAATCTGAAATCCAAAACACTTCATCCCA...CTGGTAGGGACAGCCACTTTTCAATATGCTTTTTGAATTATAGATTGCTTTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CCA 90 bp ATTATTAGGATTCTCTGTTATAGCAGCCTGGCCTTACCTCAACTAATTCAAAAGCTTCTCCAAAATGCTTaGGATGAAGTGTTTTGGATT +
Preference number: 4 (lower is better)
Translates to: IIRILCYSSLALPQLIQKLLQNA*DEVFWI
Trigger: AATCCAAAACACTTCATCCCAAGCATTTTGGAGAAG...CTTTTGAATTAGTTGAGGTAAGGCCAGGCTGCTATAACAGAGAATCCTAATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CCA 90 bp GACAGAAACAAACGTGCTCCAAATTTTGTTTGCAGGAGTATACCTTACTCAATTTCTGTCAGCATTTGCTaGTCTGTAAAGGATTGTATT +
Preference number: 4 (lower is better)
Translates to: DRNKRAPNFVCRSIPYSISVSIC*SVKDCI
Trigger: AATACAATCCTTTACAGACCAGCAAATGCTGACAGA...AATTGAGTAAGGTATACTCCTGCAAACAAAATTTGGAGCACGTTTGTTTCTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR GCA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTCATCACTTAGTGCAATaGTTTCATCAAAATGGATCT +
Preference number: 4 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSIHHLVQ*FHQNGS
Trigger: AGATCCATTTTGATGAAAGCATTGCACTAAGTGATG...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR GCA 90 bp ATTATTAGGATTCTCTGTTATAGCAGCCTGGCCTTACCTCAACTAATTCAAAAGTTTACTAGCACTGGGTaGTTTAAGATGAATGTTATC +
Preference number: 4 (lower is better)
Translates to: IIRILCYSSLALPQLIQKFTSTG*FKMNVI
Trigger: GATAACATTCATCTTAAAGCACCCAGTGCTAGTAAA...CTTTTGAATTAGTTGAGGTAAGGCCAGGCTGCTATAACAGAGAATCCTAATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS GCA 90 bp TCAAAAGTCCCCAGGAGAGGCTCCAGCAATACCAGGGTAGCGGTTTaGCCGACACCGCTCCGGGCGCTGCAGCCTTCCGGCAACCCGGAC +
Preference number: 5 (lower is better)
Translates to: SKVPRRGSSNTRVAV*PTPLRALQPSGNPD
Trigger: GTCCGGGTTGCCGGAAGGCTGCAGCGCCCGGAGCGGTGTCGGGCAAACCGCTACCCTGGTATTGCTGGAGCCTCTCCTGGGGACTTTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000446510.6
ENST00000528092.5
ENST00000530697.6
ENST00000532470.3
ENST00000534635.5
ENST00000617650.5
ENST00000678950.1
CDS CCA 90 bp CCCGACACCGCTCCGGGCGCTGCAGCCTTCCGGCAACCCGGACGTTaGGTCGGTGTCAGCCACTCTCACCTCCCATTCCCTAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: PDTAPGAAAFRQPGR*VGVSHSHLPFPSFP
Trigger: AGGAAAACTAGGGAATGGGAGGTGAGAGTGGCTGACACCGACCCAACGTCCGGGTTGCCGGAAGGCTGCAGCGCCCGGAGCGGTGTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000446510.6
ENST00000528092.5
ENST00000530697.6
ENST00000532470.3
ENST00000534635.5
ENST00000617650.5
ENST00000678950.1
CDS-3UTR CAA 90 bp TTGCTGCCTGATCGTTCCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTAGCACACCAGGCCTCCTaGAGCTGCAGTGGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: LLPDRSSGSFISEGHPAVAHQAS*SCSGLH
Trigger: GTGGAGCCCACTGCAGCTCAAGGAGGCCTGGTGTGC...TACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGGAACGATCAGGCAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp GGGGGAGGCTCCATGGACGTGGGACCCTCCAAGCCACGCATGGGATATAATCTCGTTGGAGGACAGTGGTaGGGCCTCCTCTTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: GGGSMDVGPSKPRMGYNLVGGQW*GLLLRS
Trigger: TGACCTCAAGAGGAGGCCCAACCACTGTCCTCCAAC...GAGATTATATCCCATGCGTGGCTTGGAGGGTCCCACGTCCATGGAGCCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp GGGGGAGGCTCCATGGACGTGGGACCCTCCAAGCCACGCATGGGATATAATCTCCTGATGGGCTTCCCTTaGTGGGTAACCCCACCTTTC +
Preference number: 5 (lower is better)
Translates to: GGGSMDVGPSKPRMGYNLLMGFP*WVTPPF
Trigger: GAAAGGTGGGGTTACCCACAAAGGGAAGCCCATCAG...GAGATTATATCCCATGCGTGGCTTGGAGGGTCCCACGTCCATGGAGCCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS GCA 90 bp AGGCAGGACACCGTAACGACATCTCTGCCGGGAGTCCCTTCAGACTaGGGTCTCCAGGTAACCGCACTCCAACAGAAGCAGTTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: RQDTVTTSLPGVPSD*GLQVTALQQKQLCF
Trigger: GAAGCACAACTGCTTCTGTTGGAGTGCGGTTACCTGGAGACCGCAGTCTGAAGGGACTCCCGGCAGAGATGTCGTTACGGTGTCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532470.3
ENST00000617650.5
ENST00000678480.1
CDS-3UTR CAA 90 bp GTCCATGTGTGGCTCTGTCTGCAGCACCATTTGGGGTTTGATTGCTTCTATGCCGCACACCAGGCCTCCTaGAGCTGCAGTGGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: VHVWLCLQHHLGFDCFYAAHQAS*SCSGLH
Trigger: GTGGAGCCCACTGCAGCTCAAGGAGGCCTGGTGTGC...GGCATAGAAGCAATCAAACCCCAAATGGTGCTGCAGACAGAGCCACACATGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp CCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGAGATGTCAGTCGGCCTGTCATGGCTTCCCTaGGCTAGGAAAGGGAATTCC +
Preference number: 5 (lower is better)
Translates to: PLEASSQRGTRLYEMSVGLSWLP*ARKGNS
Trigger: GGAATTCCCTTTCCTAGCCAAGGGAAGCCATGACAG...GCCGACTGACATCTCATACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp CCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTGCCTGGGTATCGGGTCAGGGACCAACTaGAGGAGGCGGTCTGTCCGT +
Preference number: 5 (lower is better)
Translates to: PQLQVCWNLLEVQFCLGIGSGTN*RRRSVR
Trigger: ACGGACAGACCGCCTCCTCAAGTTGGTCCCTGACCC...GATACCCAGGCAAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp GGGGGAGGCTCCATGGACGTGGGACCCTCCAAGCCACGCATGGGATATAATCTCTTGGAGTTGCTCTTCTaGAGGAGTATCTCTGTGGCG +
Preference number: 5 (lower is better)
Translates to: GGGSMDVGPSKPRMGYNLLELLF*RSISVA
Trigger: CGCCACAGAGATACTCCTCAAGAAGAGCAACTCCAA...GAGATTATATCCCATGCGTGGCTTGGAGGGTCCCACGTCCATGGAGCCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS GCA 90 bp TCAGACTGCGGTCTCCAGGTAACCGCACTCCAACAGAAGCAGTTGTaGTTCCTATCGGGTCACCTGTTCAAAAGTCCCCAGGAGAGGCTC +
Preference number: 5 (lower is better)
Translates to: SDCGLQVTALQQKQL*FLSGHLFKSPQERL
Trigger: GAGCCTCTCCTGGGGACTTTTGAACAGGTGACCCGATAGGAAGCACAACTGCTTCTGTTGGAGTGCGGTTACCTGGAGACCGCAGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532470.3
ENST00000617650.5
CDS-3UTR CAA 90 bp CCCCCATGTTCTTCTCTCCTCCCCTCCAGGTACGATGATGACCTGACCTGGAACGTGCCTGATCCTGCTTaGTGTTCCAGTAAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: PPCSSLLPSRYDDDLTWNVPDPA*CSSKEG
Trigger: ACCCTCCTTACTGGAACACAAAGCAGGATCAGGCAC...GTTCCAGGTCAGGTCATCATCGTACCTGGAGGGGAGGAGAGAAGAACATGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CAA 90 bp TTCATCTTTCTCCTGTGCTGGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGTGTAAGGAAGTCTAAGTaGGGGAGACGCAGGGGGTGC +
Preference number: 5 (lower is better)
Translates to: FIFLLCWVLPALKHWTPSVRKSK*GRRRGC
Trigger: GCACCCCCTGCGTCTCCCCAACTTAGACTTCCTTAC...ACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CAA 90 bp GGGGGAGGCTCCATGGACGTGGGACCCTCCAAGCCACGCATGGGATATAATCTCTGTCTGCAGCACCATTaGGGGTTTGATTGCTTCTAT +
Preference number: 5 (lower is better)
Translates to: GGGSMDVGPSKPRMGYNLCLQHH*GFDCFY
Trigger: ATAGAAGCAATCAAACCCCAAATGGTGCTGCAGACA...GAGATTATATCCCATGCGTGGCTTGGAGGGTCCCACGTCCATGGAGCCTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp CCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGAGATGTCAGTCGGCAGCTTCCCAGAGGCTTaGTTTACTTACTCAAGCCTC +
Preference number: 5 (lower is better)
Translates to: PLEASSQRGTRLYEMSVGSFPEA*FTYSSL
Trigger: GAGGCTTGAGTAAGTAAACAAAGCCTCTGGGAAGCT...GCCGACTGACATCTCATACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp CCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGAGATGTCAGTCGGCTTGTTCCTTTCCATGTaGAGTGCTTCCTTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: PLEASSQRGTRLYEMSVGLFLSM*SASFRS
Trigger: GCTCCTGAAGGAAGCACTCAACATGGAAAGGAACAA...GCCGACTGACATCTCATACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp CACGCAGGTGAGGACAATGTCCTAAAATATAATGGACATCCAGAAAGAAGGAACCCGGCAACCCGGACGTaGGGTCGGTGTCAGCCACTC +
Preference number: 5 (lower is better)
Translates to: HAGEDNVLKYNGHPERRNPATRT*GRCQPL
Trigger: GAGTGGCTGACACCGACCCAACGTCCGGGTTGCCGG...GTTCCTTCTTTCTGGATGTCCATTATATTTTAGGACATTGTCCTCACCTGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678950.1
CDS-3UTR CAA 90 bp CCCCCATGTTCTTCTCTCCTCCCCTCCAGGTACGATGATGACCTGACCTGGAACGCCCTTAACAACTTCTaGTGCCTGATCCTGCTTTGT +
Preference number: 5 (lower is better)
Translates to: PPCSSLLPSRYDDDLTWNALNNF*CLILLC
Trigger: ACAAAGCAGGATCAGGCACAAGAAGTTGTTAAGGGC...GTTCCAGGTCAGGTCATCATCGTACCTGGAGGGGAGGAGAGAAGAACATGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CAA 90 bp GCAATGTCCCACCCTGCTTCAGCTCACACTCTGTGGGCTGCACCCACTGTCCGAAGCACCATTTGGGGTTaGATTGCTTCTATGCCTTTT +
Preference number: 5 (lower is better)
Translates to: AMSHPASAHTLWAAPTVRSTIWG*IASMPF
Trigger: AAAAGGCATAGAAGCAATCAAACCCCAAATGGTGCT...TCGGACAGTGGGTGCAGCCCACAGAGTGTGAGCTGAAGCAGGGTGGGACATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp AGGAGTATCTCTGTGGCGTTTTCTGTATGTCCTGAATTTGAATGTTGGCCTGCCGGGTCAGGGACCAACTaGAGGAGGCGGTCTGTCCGT +
Preference number: 5 (lower is better)
Translates to: RSISVAFSVCPEFECWPAGSGTN*RRRSVR
Trigger: ACGGACAGACCGCCTCCTCAAGTTGGTCCCTGACCC...GGCAGGCCAACATTCAAATTCAGGACATACAGAAAACGCCACAGAGATACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp GTCCATGTGTGGCTCTGTCTGCAGCACCATTTGGGGTTTGATTGCTTCTATGCCGCTGGAAGTCCAGTTTaGCCTGGGTATCACCAGTGG +
Preference number: 5 (lower is better)
Translates to: VHVWLCLQHHLGFDCFYAAGSPV*PGYHQW
Trigger: CCACTGGTGATACCCAGGCAAAACTGGACTTCCAGC...GGCATAGAAGCAATCAAACCCCAAATGGTGCTGCAGACAGAGCCACACATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp CCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTGCCTGGGTATCGAATGTTGGCCTGCCTaGCTAGGCTGGGGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: PQLQVCWNLLEVQFCLGIECWPA*LGWGSS
Trigger: AGAACTTCCCCAGCCTAGCAAGGCAGGCCAACATTC...GATACCCAGGCAAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp GGCTCCACCCAGTTCAAGCTTCCCAGAGGCTTTGTTTACTTACTCAAGCCTCAGCTGATGGGCTTCCCTTaGTGGGTAACCCCACCTTTC +
Preference number: 5 (lower is better)
Translates to: GSTQFKLPRGFVYLLKPQLMGFP*WVTPPF
Trigger: GAAAGGTGGGGTTACCCACAAAGGGAAGCCCATCAG...CTGAGGCTTGAGTAAGTAAACAAAGCCTCTGGGAAGCTTGAACTGGGTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS GCA 90 bp TCGGTGTCAGCCACTCTCACCTCCCATTCCCTAGTTTTCCTCCTTTaGTCCCGTCTAGTCACTTCGCACCTTCGGCTAGTCTTTATTCAC +
Preference number: 5 (lower is better)
Translates to: SVSATLTSHSLVFLL*SRLVTSHLRLVFIH
Trigger: GTGAATAAAGACTAGCCGAAGGTGCGAAGTGACTAGACGGGAGCAAAGGAGGAAAACTAGGGAATGGGAGGTGAGAGTGGCTGACACCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000446510.6
ENST00000530697.6
ENST00000532470.3
ENST00000534635.5
ENST00000617650.5
ENST00000678950.1
CDS-3UTR CAA 90 bp ATCCCCAAATCTGAAATCCATAATGCTCCAATGAGCATTGCCTTTGAGCATCATTACCAGGGTAGCGGTTaGCCCGACACCGCTCCGGGC +
Preference number: 5 (lower is better)
Translates to: IPKSEIHNAPMSIAFEHHYQGSG*PDTAPG
Trigger: GCCCGGAGCGGTGTCGGGCAAACCGCTACCCTGGTA...ATGATGCTCAAAGGCAATGCTCATTGGAGCATTATGGATTTCAGATTTGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678950.1
CDS-3UTR CAA 90 bp GGCTTCCCTTTGTGGGTAACCCCACCTTTCTCTCTGGCTGCCCTTAACATTTTTAAAAGGGGCATCTTGTaGGAGGACAGTGGTTGGGCC +
Preference number: 5 (lower is better)
Translates to: GFPLWVTPPFSLAALNIFKRGIL*EDSGWA
Trigger: GGCCCAACCACTGTCCTCCAACAAGATGCCCCTTTT...AAAAATGTTAAGGGCAGCCAGAGAGAAAGGTGGGGTTACCCACAAAGGGAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp CTGCCTTTTGTTCAGCTATGCCCTGCCCGCAGAGGTGGAGTCTACAGAGGCACAAACCCAATACCTCAGTaGGAAATGCAGAAATCACCC +
Preference number: 5 (lower is better)
Translates to: LPFVQLCPARRGGVYRGTNPIPQ*EMQKSP
Trigger: GGGTGATTTCTGCATTTCCAACTGAGGTATTGGGTT...TGTGCCTCTGTAGACTCCACCTCTGCGGGCAGGGCATAGCTGAACAAAAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp GCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTGCCTGGGTATCACCAGTGGCTGTCATGGCTTCCCTaGGCTAGGAAAGGGAATTCC +
Preference number: 5 (lower is better)
Translates to: AGLLEFAGSPVLPGYHQWLSWLP*ARKGNS
Trigger: GGAATTCCCTTTCCTAGCCAAGGGAAGCCATGACAG...CCACTGGTGATACCCAGGCAAAACTGGACTTCCAGCAAATTCCAACAGACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp GGGGGAGGCTCCATGGACGTGGGACCCTCCAAGCCACGCATGGGATATAATCTCAATGGTCTTTACAATTaGGCATGTTTTTGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: GGGSMDVGPSKPRMGYNLNGLYN*ACFCSG
Trigger: GCCACTGCAAAAACATGCCAAATTGTAAAGACCATT...GAGATTATATCCCATGCGTGGCTTGGAGGGTCCCACGTCCATGGAGCCTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp TCCCATCTCCTCCAACCAGCCACAAGATGCAACAATGACATGGCGAGAGAGAATAGGGCGGCAATCTCCTaGGCCTTGTTGCTCTATATC +
Preference number: 5 (lower is better)
Translates to: SHLLQPATRCNNDMARENRAAIS*ALLLYI
Trigger: GATATAGAGCAACAAGGCCAAGGAGATTGCCGCCCT...ATTCTCTCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTGGAGGAGATGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CAA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTAGGGCGGCAATCTCCTaGGCCTTGTTGCTCTATATC +
Preference number: 5 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFRAAIS*ALLLYI
Trigger: GATATAGAGCAACAAGGCCAAGGAGATTGCCGCCCT...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CAA 90 bp TCCCATCTCCTCCAACCAGCCACAAGATGCAACAATGACATGGCGAGAGAGAATGGGGGAAATGGAGAGTaGCTGTTCCGTGGGTATAGT +
Preference number: 5 (lower is better)
Translates to: SHLLQPATRCNNDMARENGGNGE*LFRGYS
Trigger: ACTATACCCACGGAACAGCAACTCTCCATTTCCCCC...ATTCTCTCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTGGAGGAGATGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CAA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTGATGGAAGAGCAGACTaGCTGAGTCATCTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFDGRAD*LSHLAF
Trigger: GAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATC...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CAA 90 bp GAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTGCAGAAGTTGGAGGACAGTGGTaGGGCCTCCTCTTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: ENHYSLQSCQTGTFKSAEVGGQW*GLLLRS
Trigger: TGACCTCAAGAGGAGGCCCAACCACTGTCCTCCAAC...TTCTGCAGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp TGCTGGGAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTAAAAGGGGCATCTTGTaGGAGGACAGTGGTTGGGCC +
Preference number: 5 (lower is better)
Translates to: CWENHYSLQSCQTGTFKSKRGIL*EDSGWA
Trigger: GGCCCAACCACTGTCCTCCAACAAGATGCCCCTTTT...AGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTCCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp CCTCTGGAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGAGATGTCAGTCGGCGGTTTCTCCCCATCTTaGTGTTTTTATCTACCTTTG +
Preference number: 5 (lower is better)
Translates to: PLEASSQRGTRLYEMSVGGFSPS*CFYLPL
Trigger: CAAAGGTAGATAAAAACACAAAGATGGGGAGAAACC...GCCGACTGACATCTCATACAGCCGGGTGCCCCTCTGAGATGAAGCTTCCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp AGCTGCAGTGGGCTCCACCCAGTTCAAGCTTCCCAGAGGCTTTGTTTACTTACTTCCAACTTTGTTCTGTaGCTGGCGAGGAGCTGCATT +
Preference number: 5 (lower is better)
Translates to: SCSGLHPVQASQRLCLLTSNFVL*LARSCI
Trigger: AATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGGA...AGTAAGTAAACAAAGCCTCTGGGAAGCTTGAACTGGGTGGAGCCCACTGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp GTCCATGTGTGGCTCTGTCTGCAGCACCATTTGGGGTTTGATTGCTTCTATGCCAGAGTGTTTTCCAGCTaGGTTCCATTCTCCCCGTCA +
Preference number: 5 (lower is better)
Translates to: VHVWLCLQHHLGFDCFYARVFSS*VPFSPS
Trigger: TGACGGGGAGAATGGAACCAAGCTGGAAAACACTCT...GGCATAGAAGCAATCAAACCCCAAATGGTGCTGCAGACAGAGCCACACATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp ACAGTCAGAACCCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTGAATGTTGGCCTGCCTaGCTAGGCTGGGGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: TVRTLSCRSVGICWKSSFECWPA*LGWGSS
Trigger: AGAACTTCCCCAGCCTAGCAAGGCAGGCCAACATTC...AAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGGGTTCTGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp CTTCCTTGCTCCTCAGCTTGCAGACGGTCTATTGTGAGACTTCACCTTGTGATTGGGGGAAATGGAGAGTaGCTGTTCCGTGGGTATAGT +
Preference number: 5 (lower is better)
Translates to: LPCSSACRRSIVRLHLVIGGNGE*LFRGYS
Trigger: ACTATACCCACGGAACAGCAACTCTCCATTTCCCCC...AATCACAAGGTGAAGTCTCACAATAGACCGTCTGCAAGCTGAGGAGCAAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CAA 90 bp CTTCCTTGCTCCTCAGCTTGCAGACGGTCTATTGTGAGACTTCACCTTGTGATTAAAGTAGGATGGAGGTaGCCAGGGTTTAGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: LPCSSACRRSIVRLHLVIKVGWR*PGFRGR
Trigger: CCTTCCCCTAAACCCTGGCAACCTCCATCCTACTTT...AATCACAAGGTGAAGTCTCACAATAGACCGTCTGCAAGCTGAGGAGCAAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CAA 90 bp TTCATCTTTCTCCTGTGCTGGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGTGTGTCTGTGAGGGTGTaGCCAAAGGAGATTCACATT +
Preference number: 5 (lower is better)
Translates to: FIFLLCWVLPALKHWTPSVSVRV*PKEIHI
Trigger: AATGTGAATCTCCTTTGGCAACACCCTCACAGACAC...ACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CAA 90 bp AGCCCAGTATTAAGGTGGAAGTGTCCCAATTTTCCAGGTACTGTCTGTCATGGCAGTTTCTGCTGCCTTTaGTTCAGCTATGCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: SPVLRWKCPNFPGTVCHGSFCCL*FSYALP
Trigger: GGGCAGGGCATAGCTGAACAAAAGGCAGCAGAAACT...GCCATGACAGACAGTACCTGGAAAATTGGGACACTTCCACCTTAATACTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp CTGGAAGTCCAGTTTTGCCTGGGTATCACCAGTGGAGGTGGCAGAACAGTAAATAGAGTGTTTTCCAGCTaGGTTCCATTCTCCCCGTCA +
Preference number: 5 (lower is better)
Translates to: LEVQFCLGITSGGGRTVNRVFSS*VPFSPS
Trigger: TGACGGGGAGAATGGAACCAAGCTGGAAAACACTCT...ATTTACTGTTCTGCCACCTCCACTGGTGATACCCAGGCAAAACTGGACTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp GAAGCTTCATCTCAGAGGGGCACCCGGCTGTATGAGATGTCAGTCGGCCCCCTACTTATGAAGCTTAGTTaGGCTGGATATGAAATTCTG +
Preference number: 5 (lower is better)
Translates to: EASSQRGTRLYEMSVGPLLMKLS*AGYEIL
Trigger: CAGAATTTCATATCCAGCCAAACTAAGCTTCATAAG...TAGGGGGCCGACTGACATCTCATACAGCCGGGTGCCCCTCTGAGATGAAGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGAAAGTAGGATGGAGGTaGCCAGGGTTTAGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKKVGWR*PGFRGR
Trigger: CCTTCCCCTAAACCCTGGCAACCTCCATCCTACTTT...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CAA 90 bp CTTCCTTGCTCCTCAGCTTGCAGACGGTCTATTGTGAGACTTCACCTTGTGATTACTTACACTAGTGATTaGCCAAGGGCTCTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: LPCSSACRRSIVRLHLVITYTSD*PRALRP
Trigger: AGGCCTGAGAGCCCTTGGCAAATCACTAGTGTAAGT...AATCACAAGGTGAAGTCTCACAATAGACCGTCTGCAAGCTGAGGAGCAAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CAA 90 bp TCCCATCTCCTCCAACCAGCCACAAGATGCAACAATGACATGGCGAGAGAGAATGTGTCTGTGAGGGTGTaGCCAAAGGAGATTCACATT +
Preference number: 5 (lower is better)
Translates to: SHLLQPATRCNNDMARENVSVRV*PKEIHI
Trigger: AATGTGAATCTCCTTTGGCAACACCCTCACAGACAC...ATTCTCTCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTGGAGGAGATGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CAA 90 bp CTAAGACCATTGGAAAAGCCCAGTATTAAGGTGGAAGTGTCCCAATTTTCCAGGGCTGGAAGTCCAGTTTaGCCTGGGTATCACCAGTGG +
Preference number: 5 (lower is better)
Translates to: LRPLEKPSIKVEVSQFSRAGSPV*PGYHQW
Trigger: CCACTGGTGATACCCAGGCAAAACTGGACTTCCAGC...CCTGGAAAATTGGGACACTTCCACCTTAATACTGGGCTTTTCCAATGGTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp AGGAGTATCTCTGTGGCGTTTTCTGTATGTCCTGAATTTGAATGTTGGCCTGCCAGGAGCTGCATTCCTTaGGAGGAGGAGAGAGAGACT +
Preference number: 5 (lower is better)
Translates to: RSISVAFSVCPEFECWPARSCIP*EEERET
Trigger: AGTCTCTCTCTCCTCCTCCAAAGGAATGCAGCTCCT...GGCAGGCCAACATTCAAATTCAGGACATACAGAAAACGCCACAGAGATACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp CGGCAATCTCCTTGGCCTTGTTGCTCTATATCCCTAATAACAGGTAACTCTGATAGGGCGGCAATCTCCTaGGCCTTGTTGCTCTATATC +
Preference number: 5 (lower is better)
Translates to: RQSPWPCCSISLITGNSDRAAIS*ALLLYI
Trigger: GATATAGAGCAACAAGGCCAAGGAGATTGCCGCCCT...ATCAGAGTTACCTGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CAA 90 bp AAGCAGGCAGGAGATGGAAGAGCAGACTTGCTGAGTCATCTGGCCTTCATCTTTAAATGTGGCAGACACTaGACTCTAGGGCAACATGAA +
Preference number: 5 (lower is better)
Translates to: KQAGDGRADLLSHLAFIFKCGRH*TLGQHE
Trigger: TTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTT...AAAGATGAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATCTCCTGCCTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CAA 90 bp TTCATCTTTCTCCTGTGCTGGGTGCTTCCTGCCCTCAAACACTGGACTCCAAGTCAAGTTCTTCAGCTTTaGGACTCTTGGACTTACACT +
Preference number: 5 (lower is better)
Translates to: FIFLLCWVLPALKHWTPSQVLQL*DSWTYT
Trigger: AGTGTAAGTCCAAGAGTCCAAAAGCTGAAGAACTTG...ACTTGGAGTCCAGTGTTTGAGGGCAGGAAGCACCCAGCACAGGAGAAAGATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CAA 90 bp CGGCAATCTCCTTGGCCTTGTTGCTCTATATCCCTAATAACAGGTAACTCTGATGATGGAAGAGCAGACTaGCTGAGTCATCTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: RQSPWPCCSISLITGNSDDGRAD*LSHLAF
Trigger: GAAGGCCAGATGACTCAGCAAGTCTGCTCTTCCATC...ATCAGAGTTACCTGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CAA 90 bp AGAAATCACCCATTTTCTGTGTCGCTCACGCTGGGAGCTGTAGACTGTAGCTGTTGTCTGCAGCACCATTaGGGGTTTGATTGCTTCTAT +
Preference number: 5 (lower is better)
Translates to: RNHPFSVSLTLGAVDCSCCLQHH*GFDCFY
Trigger: ATAGAAGCAATCAAACCCCAAATGGTGCTGCAGACA...ACAGCTACAGTCTACAGCTCCCAGCGTGAGCGACACAGAAAATGGGTGATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp GCATCTTGTTGGAGGACAGTGGTTGGGCCTCCTCTTGAGGTCAATCTAAGTGTTAACCCAATACCTCAGTaGGAAATGCAGAAATCACCC +
Preference number: 5 (lower is better)
Translates to: ASCWRTVVGPPLEVNLSVNPIPQ*EMQKSP
Trigger: GGGTGATTTCTGCATTTCCAACTGAGGTATTGGGTT...AACACTTAGATTGACCTCAAGAGGAGGCCCAACCACTGTCCTCCAACAAGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp GCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTGCCTGGGTATCACCAGTGGCATCTGCTAAGACCATaGGAAAAGCCCAGTATTAAG +
Preference number: 5 (lower is better)
Translates to: AGLLEFAGSPVLPGYHQWHLLRP*EKPSIK
Trigger: CTTAATACTGGGCTTTTCCAATGGTCTTAGCAGATG...CCACTGGTGATACCCAGGCAAAACTGGACTTCCAGCAAATTCCAACAGACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp TGCTGGGAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTAGCTTCCCAGAGGCTTaGTTTACTTACTCAAGCCTC +
Preference number: 5 (lower is better)
Translates to: CWENHYSLQSCQTGTFKSSFPEA*FTYSSL
Trigger: GAGGCTTGAGTAAGTAAACAAAGCCTCTGGGAAGCT...AGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTCCCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp GGCTTCCCTTTGTGGGTAACCCCACCTTTCTCTCTGGCTGCCCTTAACATTTTTATTCTCTATCCAACTTaGTTCTGTTGCTGGCGAGGA +
Preference number: 5 (lower is better)
Translates to: GFPLWVTPPFSLAALNIFILYPT*FCCWRG
Trigger: TCCTCGCCAGCAACAGAACAAAGTTGGATAGAGAAT...AAAAATGTTAAGGGCAGCCAGAGAGAAAGGTGGGGTTACCCACAAAGGGAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp ACAGTCAGAACCCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTTTGTTCCTTTCCATGTaGAGTGCTTCCTTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: TVRTLSCRSVGICWKSSFLFLSM*SASFRS
Trigger: GCTCCTGAAGGAAGCACTCAACATGGAAAGGAACAA...AAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGGGTTCTGACTGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGTCAGGGGTGTAGTTTaGAGTCGCGCTCCTAAGCAT +
Preference number: 5 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYVRGVV*SRAPKH
Trigger: ATGCTTAGGAGCGCGACTCAAAACTACACCCCTGAC...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678480.1
CDS-3UTR CAA 90 bp TCCCATCTCCTCCAACCAGCCACAAGATGCAACAATGACATGGCGAGAGAGAATATCTCCTTGGCCTTGTaGCTCTATATCCCTAATAAC +
Preference number: 5 (lower is better)
Translates to: SHLLQPATRCNNDMARENISLAL*LYIPNN
Trigger: GTTATTAGGGATATAGAGCAACAAGGCCAAGGAGAT...ATTCTCTCTCGCCATGTCATTGTTGCATCTTGTGGCTGGTTGGAGGAGATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CAA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGGGGGAAATGGAGAGTaGCTGTTCCGTGGGTATAGT +
Preference number: 5 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYGGNGE*LFRGYS
Trigger: ACTATACCCACGGAACAGCAACTCTCCATTTCCCCC...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CAA 90 bp CACGCAGGTGAGGACAATGTCCTAAAATATAATGGACATCCAGAAAGAAGGAACGTGCCTGATCCTGCTTaGTGTTCCAGTAAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: HAGEDNVLKYNGHPERRNVPDPA*CSSKEG
Trigger: ACCCTCCTTACTGGAACACAAAGCAGGATCAGGCAC...GTTCCTTCTTTCTGGATGTCCATTATATTTTAGGACATTGTCCTCACCTGCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CAA 90 bp CTCCTGGATAATATCCTGAAGAGTGTTTTCCAGCTTGGTTCCATTCTCCCCGTCTGCTTCTATGCCTTTTaGTTTCTTCCAAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LLDNILKSVFQLGSILPVCFYAF*FLPSCR
Trigger: CCTGCAGCTTGGAAGAAACAAAAAGGCATAGAAGCA...GACGGGGAGAATGGAACCAAGCTGGAAAACACTCTTCAGGATATTATCCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp CCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTTTGCCTGGGTATCGGTTTCTCCCCATCTTaGTGTTTTTATCTACCTTTG +
Preference number: 5 (lower is better)
Translates to: PQLQVCWNLLEVQFCLGIGFSPS*CFYLPL
Trigger: CAAAGGTAGATAAAAACACAAAGATGGGGAGAAACC...GATACCCAGGCAAAACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS TCA 90 bp ACATCCCAGAGAGAACGGATTCTTGGGAAATGTGGTTCTTTCAGCTaGCGCATGGTGACTCTTTACGGAAAAGGACTACAATTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: TSQRERILGKCGSFS*RMVTLYGKGLQFPE
Trigger: TTCTGGGAATTGTAGTCCTTTTCCGTAAAGAGTCACCATGCGTCAGCTGAAAGAACCACATTTCCCAAGAATCCGTTCTCTCTGGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678060.1
CDS CCA 90 bp GTGCTTTCCCAAGAGACATCTGAAAGAAGCAGTAAATTTGAAAGCTaGCCTGGATTTTGTAGGCACCATAGTCAGGCCTCTGCACTGAAA +
Preference number: 5 (lower is better)
Translates to: VLSQETSERSSKFES*PGFCRHHSQASALK
Trigger: TTTCAGTGCAGAGGCCTGACTATGGTGCCTACAAAATCCAGGCCAGCTTTCAAATTTACTGCTTCTTTCAGATGTCTCTTGGGAAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677097.1
CDS-3UTR CAA 90 bp CTTCCTTGCTCCTCAGCTTGCAGACGGTCTATTGTGAGACTTCACCTTGTGATTTCAACAACACTCACATaGATAGCACTATCTCTGGAC +
Preference number: 5 (lower is better)
Translates to: LPCSSACRRSIVRLHLVISTTLT*IALSLD
Trigger: GTCCAGAGATAGTGCTATCAATGTGAGTGTTGTTGA...AATCACAAGGTGAAGTCTCACAATAGACCGTCTGCAAGCTGAGGAGCAAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CAA 90 bp GGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCTAAGAAATGTGGCAGACACTaGACTCTAGGGCAACATGAA +
Preference number: 5 (lower is better)
Translates to: GNPAICDNMGKPEGHYAKKCGRH*TLGQHE
Trigger: TTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTT...CTTAGCATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CAA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATACTTACACTAGTGATTaGCCAAGGGCTCTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYTYTSD*PRALRP
Trigger: AGGCCTGAGAGCCCTTGGCAAATCACTAGTGTAAGT...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CAA 90 bp GTGCCTGATCCTGCTTTGTGTTCCAGTAAGGAGGGTGAGAAAGGTCACTACCAGTTGGTACAGTACAGGTaGAATATCTCTTCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: VPDPALCSSKEGEKGHYQLVQYR*NISSPK
Trigger: TTTTGGAGAAGAGATATTCAACCTGTACTGTACCAA...CTGGTAGTGACCTTTCTCACCCTCCTTACTGGAACACAAAGCAGGATCAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CAA 90 bp CTAACAGTCAGAACCCTCAGCTGCAGGTCTGTTGGAATTTGCTGGAAGTCCAGTTGCTCCAAATTTTGTTaGCAGGAGTATACCTTACTC +
Preference number: 5 (lower is better)
Translates to: LTVRTLSCRSVGICWKSSCSKFC*QEYTLL
Trigger: GAGTAAGGTATACTCCTGCAAACAAAATTTGGAGCA...ACTGGACTTCCAGCAAATTCCAACAGACCTGCAGCTGAGGGTTCTGACTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp AGGTGGAAGTGTCCCAATTTTCCAGGTACTGTCTGTCATGGCTTCCCTTGGCTAATCTACCTTTGGTCTTaGATGATGGTGATGTACAGA +
Preference number: 5 (lower is better)
Translates to: RWKCPNFPGTVCHGFPWLIYLWS*MMVMYR
Trigger: TCTGTACATCACCATCATCAAAGACCAAAGGTAGAT...TAGCCAAGGGAAGCCATGACAGACAGTACCTGGAAAATTGGGACACTTCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp AGAATGTTGAGTATTGGCCCCCACTCTCTTCTGGCTTGTATAGTTTCTGCTGAACTGTATGTCCTGAATTaGAATGTTGGCCTGCCTTGC +
Preference number: 5 (lower is better)
Translates to: RMLSIGPHSLLACIVSAELYVLN*NVGLPC
Trigger: GCAAGGCAGGCCAACATTCAAATTCAGGACATACAG...TTCAGCAGAAACTATACAAGCCAGAAGAGAGTGGGGGCCAATACTCAACATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp GCTGGGAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTGTTTTCTTTAAGAATGTaGAGTATTGGCCCCCACTCT +
Preference number: 5 (lower is better)
Translates to: AGRTTTLFKAVRQGRLSLFSLRM*SIGPHS
Trigger: AGAGTGGGGGCCAATACTCAACATTCTTAAAGAAAA...CAGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTCCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp AGCTGCAGTGGGCTCCACCCAGTTCAAGCTTCCCAGAGGCTTTGTTTACTTACTCTTATGAAGCTTAGTTaGGCTGGATATGAAATTCTG +
Preference number: 5 (lower is better)
Translates to: SCSGLHPVQASQRLCLLTLMKLS*AGYEIL
Trigger: CAGAATTTCATATCCAGCCAAACTAAGCTTCATAAG...AGTAAGTAAACAAAGCCTCTGGGAAGCTTGAACTGGGTGGAGCCCACTGCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp CACGCAGGTGAGGACAATGTCCTAAAATATAATGGACATCCAGAAAGAAGGAACTGTCCGTCCTTTCTATaGTGTAGTCCTTGGGTAGCA +
Preference number: 5 (lower is better)
Translates to: HAGEDNVLKYNGHPERRNCPSFL*CSPWVA
Trigger: TGCTACCCAAGGACTACACAATAGAAAGGACGGACA...GTTCCTTCTTTCTGGATGTCCATTATATTTTAGGACATTGTCCTCACCTGCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR CAA 90 bp CACGCAGGTGAGGACAATGTCCTAAAATATAATGGACATCCAGAAAGAAGGAACGCCCTTAACAACTTCTaGTGCCTGATCCTGCTTTGT +
Preference number: 5 (lower is better)
Translates to: HAGEDNVLKYNGHPERRNALNNF*CLILLC
Trigger: ACAAAGCAGGATCAGGCACAAGAAGTTGTTAAGGGC...GTTCCTTCTTTCTGGATGTCCATTATATTTTAGGACATTGTCCTCACCTGCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CAA 90 bp AAATTCTTTTCTTTAAGAATGTTGAGTATTGGCCCCCACTCTCTTCTGGCTTGTAGTTTCTGCTGCCTTTaGTTCAGCTATGCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: KFFSLRMLSIGPHSLLACSFCCL*FSYALP
Trigger: GGGCAGGGCATAGCTGAACAAAAGGCAGCAGAAACT...ACAAGCCAGAAGAGAGTGGGGGCCAATACTCAACATTCTTAAAGAAAAGAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp ATTGCTTCTATGCCTTTTTGTTTCTTCCAAGCTGCAGGAGATCACCACTTGATTTCCAACTTTGTTCTGTaGCTGGCGAGGAGCTGCATT +
Preference number: 5 (lower is better)
Translates to: IASMPFCFFQAAGDHHLISNFVL*LARSCI
Trigger: AATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGGA...AATCAAGTGGTGATCTCCTGCAGCTTGGAAGAAACAAAAAGGCATAGAAGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp CTAAGACCATTGGAAAAGCCCAGTATTAAGGTGGAAGTGTCCCAATTTTCCAGGATTCTCTATCCAACTTaGTTCTGTTGCTGGCGAGGA +
Preference number: 5 (lower is better)
Translates to: LRPLEKPSIKVEVSQFSRILYPT*FCCWRG
Trigger: TCCTCGCCAGCAACAGAACAAAGTTGGATAGAGAAT...CCTGGAAAATTGGGACACTTCCACCTTAATACTGGGCTTTTCCAATGGTCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp GGTGACAAAATCTGTCAGCATTTGCTGGTCTGTAAAGGATTGTATTTCTCCTTGTTGGAGTTGCTCTTCTaGAGGAGTATCTCTGTGGCG +
Preference number: 5 (lower is better)
Translates to: GDKICQHLLVCKGLYFSLLELLF*RSISVA
Trigger: CGCCACAGAGATACTCCTCAAGAAGAGCAACTCCAA...CAAGGAGAAATACAATCCTTTACAGACCAGCAAATGCTGACAGATTTTGTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp TCGTCAAAGTCATTCTCTATCCAACTTTGTTCTGTTGCTGGCGAGGAGCTGCATTTATGTGTCTTGGAGTaGCTCTTCTTGAGGAGTATC +
Preference number: 5 (lower is better)
Translates to: SSKSFSIQLCSVAGEELHLCVLE*LFLRSI
Trigger: GATACTCCTCAAGAAGAGCAACTCCAAGACACATAA...ATGCAGCTCCTCGCCAGCAACAGAACAAAGTTGGATAGAGAATGACTTTGACGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS TCA 90 bp ATGTGTGTCTCTTCACGTGAGATGGGTCTCCTGAATACAGCACACTaGTGGGTCTTGATTCTTTATCCAATTTGCCAGTCTGTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: MCVSSREMGLLNTAH*WVLILYPICQSVSF
Trigger: AAAAGACACAGACTGGCAAATTGGATAAAGAATCAAGACCCATCAGTGTGCTGTATTCAGGAGACCCATCTCACGTGAAGAGACACACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679127.1
CDS-3UTR CAA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATGCAATCTCCTTGGCCTaGTTGCTCTATATCCCTAAT +
Preference number: 5 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYAISLA*LLYIPN
Trigger: ATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGC...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CAA 90 bp CGGCAATCTCCTTGGCCTTGTTGCTCTATATCCCTAATAACAGGTAACTCTGATCAAGTTCTTCAGCTTTaGGACTCTTGGACTTACACT +
Preference number: 5 (lower is better)
Translates to: RQSPWPCCSISLITGNSDQVLQL*DSWTYT
Trigger: AGTGTAAGTCCAAGAGTCCAAAAGCTGAAGAACTTG...ATCAGAGTTACCTGTTATTAGGGATATAGAGCAACAAGGCCAAGGAGATTGCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677116.1
ENST00000679072.1
CDS-3UTR CAA 90 bp GAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACGTTTAAGTCTGCAGAAATCTACCTTTGGTCTTaGATGATGGTGATGTACAGA +
Preference number: 5 (lower is better)
Translates to: ENHYSLQSCQTGTFKSAEIYLWS*MMVMYR
Trigger: TCTGTACATCACCATCATCAAAGACCAAAGGTAGAT...TTCTGCAGACTTAAACGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp CTAAGACCATTGGAAAAGCCCAGTATTAAGGTGGAAGTGTCCCAATTTTCCAGGTTATGTGTCTTGGAGTaGCTCTTCTTGAGGAGTATC +
Preference number: 5 (lower is better)
Translates to: LRPLEKPSIKVEVSQFSRLCVLE*LFLRSI
Trigger: GATACTCCTCAAGAAGAGCAACTCCAAGACACATAA...CCTGGAAAATTGGGACACTTCCACCTTAATACTGGGCTTTTCCAATGGTCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp TGGTACCAGTTGTTCCTTTCCATGTTGAGTGCTTCCTTCAGGAGCTCTTGTAAGAATGGTCTTTACAATTaGGCATGTTTTTGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: WYQLFLSMLSASFRSSCKNGLYN*ACFCSG
Trigger: GCCACTGCAAAAACATGCCAAATTGTAAAGACCATT...CTTACAAGAGCTCCTGAAGGAAGCACTCAACATGGAAAGGAACAACTGGTACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp AAAGAAGGAAATCCTGCTATATGCGACAACATGGGCAAACCTGAAGGGCATTATATCTCCTTGGCCTTGTaGCTCTATATCCCTAATAAC +
Preference number: 5 (lower is better)
Translates to: KEGNPAICDNMGKPEGHYISLAL*LYIPNN
Trigger: GTTATTAGGGATATAGAGCAACAAGGCCAAGGAGAT...ATAATGCCCTTCAGGTTTGCCCATGTTGTCGCATATAGCAGGATTTCCTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CAA 90 bp ATCCCCAAATCTGAAATCCATAATGCTCCAATGAGCATTGCCTTTGAGCATCATCAAACCAAGGCAGTGTaGGTACAGTACAGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: IPKSEIHNAPMSIAFEHHQTKAV*VQYRLN
Trigger: ATTCAACCTGTACTGTACCAACACTGCCTTGGTTTG...ATGATGCTCAAAGGCAATGCTCATTGGAGCATTATGGATTTCAGATTTGGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CAA 90 bp CTAAGACCATTGGAAAAGCCCAGTATTAAGGTGGAAGTGTCCCAATTTTCCAGGTGCTCCAAATTTTGTTaGCAGGAGTATACCTTACTC +
Preference number: 5 (lower is better)
Translates to: LRPLEKPSIKVEVSQFSRCSKFC*QEYTLL
Trigger: GAGTAAGGTATACTCCTGCAAACAAAATTTGGAGCA...CCTGGAAAATTGGGACACTTCCACCTTAATACTGGGCTTTTCCAATGGTCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp GGTGACAAAATCTGTCAGCATTTGCTGGTCTGTAAAGGATTGTATTTCTCCTTGTGCTTCTATGCCTTTTaGTTTCTTCCAAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GDKICQHLLVCKGLYFSLCFYAF*FLPSCR
Trigger: CCTGCAGCTTGGAAGAAACAAAAAGGCATAGAAGCA...CAAGGAGAAATACAATCCTTTACAGACCAGCAAATGCTGACAGATTTTGTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp AAATTCTTTTCTTTAAGAATGTTGAGTATTGGCCCCCACTCTCTTCTGGCTTGTCTGTATGTCCTGAATTaGAATGTTGGCCTGCCTTGC +
Preference number: 5 (lower is better)
Translates to: KFFSLRMLSIGPHSLLACLYVLN*NVGLPC
Trigger: GCAAGGCAGGCCAACATTCAAATTCAGGACATACAG...ACAAGCCAGAAGAGAGTGGGGGCCAATACTCAACATTCTTAAAGAAAAGAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp CTAAGACCATTGGAAAAGCCCAGTATTAAGGTGGAAGTGTCCCAATTTTCCAGGTTTTCTTTAAGAATGTaGAGTATTGGCCCCCACTCT +
Preference number: 5 (lower is better)
Translates to: LRPLEKPSIKVEVSQFSRFSLRM*SIGPHS
Trigger: AGAGTGGGGGCCAATACTCAACATTCTTAAAGAAAA...CCTGGAAAATTGGGACACTTCCACCTTAATACTGGGCTTTTCCAATGGTCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp TGTAAGGCAGGCCTGTTGGTGACAAAATCTGTCAGCATTTGCTGGTCTGTAAAGCTGGTCTGTAAAGGATaGTATTTCTCCTTGACTTAT +
Preference number: 5 (lower is better)
Translates to: CKAGLLVTKSVSICWSVKLVCKG*YFSLTY
Trigger: ATAAGTCAAGGAGAAATACAATCCTTTACAGACCAG...CTTTACAGACCAGCAAATGCTGACAGATTTTGTCACCAACAGGCCTGCCTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp ATTATTAGGATTCTCTGTTATAGCAGCCTGGCCTTACCTCAACTAATTCAAAAGTGTCCGTCCTTTCTATaGTGTAGTCCTTGGGTAGCA +
Preference number: 5 (lower is better)
Translates to: IIRILCYSSLALPQLIQKCPSFL*CSPWVA
Trigger: TGCTACCCAAGGACTACACAATAGAAAGGACGGACA...CTTTTGAATTAGTTGAGGTAAGGCCAGGCTGCTATAACAGAGAATCCTAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676921.1
ENST00000678950.1
ENST00000679022.1
CDS-3UTR CAA 90 bp ATTGCTTCTATGCCTTTTTGTTTCTTCCAAGCTGCAGGAGATCACCACTTGATTCATCTGCTAAGACCATaGGAAAAGCCCAGTATTAAG +
Preference number: 5 (lower is better)
Translates to: IASMPFCFFQAAGDHHLIHLLRP*EKPSIK
Trigger: CTTAATACTGGGCTTTTCCAATGGTCTTAGCAGATG...AATCAAGTGGTGATCTCCTGCAGCTTGGAAGAAACAAAAAGGCATAGAAGCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp CCACCATATATGGGGTCTCAACTTGATTTATACTGCTATTTGATAGATTCCAGACAAACCAAGGCAGTGTaGGTACAGTACAGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: PPYMGSQLDLYCYLIDSRQTKAV*VQYRLN
Trigger: ATTCAACCTGTACTGTACCAACACTGCCTTGGTTTG...TCTGGAATCTATCAAATAGCAGTATAAATCAAGTTGAGACCCCATATATGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CAA 90 bp ATTGCTTCTATGCCTTTTTGTTTCTTCCAAGCTGCAGGAGATCACCACTTGATTAACGTGCTCCAAATTTaGTTTGCAGGAGTATACCTT +
Preference number: 5 (lower is better)
Translates to: IASMPFCFFQAAGDHHLINVLQI*FAGVYL
Trigger: AAGGTATACTCCTGCAAACAAAATTTGGAGCACGTT...AATCAAGTGGTGATCTCCTGCAGCTTGGAAGAAACAAAAAGGCATAGAAGCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp GTTCAAACTAAAAAGGGCAAGAAAACTGTCCGTCCTTTCTATTGTGTAGTCCTTACTCATACGTGGGAATaGAACAATGAGAACACTTGG +
Preference number: 5 (lower is better)
Translates to: VQTKKGKKTVRPFYCVVLTHTWE*NNENTW
Trigger: CCAAGTGTTCTCATTGTTCAATTCCCACGTATGAGT...AAGGACTACACAATAGAAAGGACGGACAGTTTTCTTGCCCTTTTTAGTTTGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678950.1
CDS-3UTR CAA 90 bp AAAAATAAATGTGGCAGACACTTGACTCTAGGGCAACATGAAATCAAGAGCATTTCAACAACACTCACATaGATAGCACTATCTCTGGAC +
Preference number: 5 (lower is better)
Translates to: KNKCGRHLTLGQHEIKSISTTLT*IALSLD
Trigger: GTCCAGAGATAGTGCTATCAATGTGAGTGTTGTTGA...AATGCTCTTGATTTCATGTTGCCCTAGAGTCAAGTGTCTGCCACATTTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677116.1
ENST00000678480.1
ENST00000679072.1
CDS-3UTR CAA 90 bp GTTCAAACTAAAAAGGGCAAGAAAACTGTCCGTCCTTTCTATTGTGTAGTCCTTAATTCAAAAAGCATATaGAAAAGTGGCTGTCCCTAC +
Preference number: 5 (lower is better)
Translates to: VQTKKGKKTVRPFYCVVLNSKSI*KSGCPY
Trigger: GTAGGGACAGCCACTTTTCAATATGCTTTTTGAATT...AAGGACTACACAATAGAAAGGACGGACAGTTTTCTTGCCCTTTTTAGTTTGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CAA 90 bp GACAGAAACAAACGTGCTCCAAATTTTGTTTGCAGGAGTATACCTTACTCAATTAACGTGCTCCAAATTTaGTTTGCAGGAGTATACCTT +
Preference number: 5 (lower is better)
Translates to: DRNKRAPNFVCRSIPYSINVLQI*FAGVYL
Trigger: AAGGTATACTCCTGCAAACAAAATTTGGAGCACGTT...AATTGAGTAAGGTATACTCCTGCAAACAAAATTTGGAGCACGTTTGTTTCTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp TTGGTGACAAAATCTGTCAGCATTTGCTGGTCTGTAAAGGATTGTATTTCTCCTCTGGTCTGTAAAGGATaGTATTTCTCCTTGACTTAT +
Preference number: 5 (lower is better)
Translates to: LVTKSVSICWSVKDCISPLVCKG*YFSLTY
Trigger: ATAAGTCAAGGAGAAATACAATCCTTTACAGACCAG...AGGAGAAATACAATCCTTTACAGACCAGCAAATGCTGACAGATTTTGTCACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676885.1
ENST00000677673.1
CDS-3UTR CAA 90 bp GAGAAAGCAATCTATAATTCAAAAAGCATATTGAAAAGTGGCTGTCCCTACCAGATTCACAATAGCAAATaGTTGGAACCAGCCCAAATG +
Preference number: 5 (lower is better)
Translates to: EKAIYNSKSILKSGCPYQIHNSK*LEPAQM
Trigger: CATTTGGGCTGGTTCCAACAATTTGCTATTGTGAAT...CTGGTAGGGACAGCCACTTTTCAATATGCTTTTTGAATTATAGATTGCTTTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678950.1
CDS-3UTR CAA 90 bp ATTATTAGGATTCTCTGTTATAGCAGCCTGGCCTTACCTCAACTAATTCAAAAGAATTCAAAAAGCATATaGAAAAGTGGCTGTCCCTAC +
Preference number: 5 (lower is better)
Translates to: IIRILCYSSLALPQLIQKNSKSI*KSGCPY
Trigger: GTAGGGACAGCCACTTTTCAATATGCTTTTTGAATT...CTTTTGAATTAGTTGAGGTAAGGCCAGGCTGCTATAACAGAGAATCCTAATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS-3UTR CAA 90 bp CCACCATATATGGGGTCTCAACTTGATTTATACTGCTATTTGATAGATTCCAGATTGGTACAGTACAGGTaGAATATCTCTTCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: PPYMGSQLDLYCYLIDSRLVQYR*NISSPK
Trigger: TTTTGGAGAAGAGATATTCAACCTGTACTGTACCAA...TCTGGAATCTATCAAATAGCAGTATAAATCAAGTTGAGACCCCATATATGGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676921.1
ENST00000678950.1
CDS GCA 72 bp CCCAGGAGAGGCTCCAGCAATACCAGGGTAGCGGTTTaGCCGACACCGCTCCGGGCGCTGCAGCCTTCCGGC +
Preference number: 6 (lower is better)
Translates to: PRRGSSNTRVAV*PTPLRALQPSG
Trigger: GCCGGAAGGCTGCAGCGCCCGGAGCGGTGTCGGGCAAACCGCTACCCTGGTATTGCTGGAGCCTCTCCTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000446510.6
ENST00000528092.5
ENST00000530697.6
ENST00000532470.3
ENST00000534635.5
ENST00000617650.5
ENST00000678950.1
CDS CAA 72 bp CGCTCCGGGCGCTGCAGCCTTCCGGCAACCCGGACGTaGGGTCGGTGTCAGCCACTCTCACCTCCCATTCCC +
Preference number: 6 (lower is better)
Translates to: RSGRCSLPATRT*GRCQPLSPPIP
Trigger: GGGAATGGGAGGTGAGAGTGGCTGACACCGACCCAACGTCCGGGTTGCCGGAAGGCTGCAGCGCCCGGAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000446510.6
ENST00000528092.5
ENST00000530697.6
ENST00000532470.3
ENST00000534635.5
ENST00000617650.5
ENST00000678950.1
CDS CAA 72 bp CCCCAGGAGAGGCTCCAGCAATACCAGGGTAGCGGTTaGCCCGACACCGCTCCGGGCGCTGCAGCCTTCCGG +
Preference number: 6 (lower is better)
Translates to: PQERLQQYQGSG*PDTAPGAAAFR
Trigger: CCGGAAGGCTGCAGCGCCCGGAGCGGTGTCGGGCAAACCGCTACCCTGGTATTGCTGGAGCCTCTCCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000446510.6
ENST00000528092.5
ENST00000530697.6
ENST00000532470.3
ENST00000534635.5
ENST00000617650.5
ENST00000678950.1
CDS CCA 72 bp GCTCCGGGCGCTGCAGCCTTCCGGCAACCCGGACGTTaGGTCGGTGTCAGCCACTCTCACCTCCCATTCCCT +
Preference number: 6 (lower is better)
Translates to: APGAAAFRQPGR*VGVSHSHLPFP
Trigger: AGGGAATGGGAGGTGAGAGTGGCTGACACCGACCCAACGTCCGGGTTGCCGGAAGGCTGCAGCGCCCGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000446510.6
ENST00000528092.5
ENST00000530697.6
ENST00000532470.3
ENST00000534635.5
ENST00000617650.5
ENST00000678950.1
CDS CAA 90 bp TTCAAAAGTCCCCAGGAGAGGCTCCAGCAATACCAGGGTAGCGGTTaGCCCGACACCGCTCCGGGCGCTGCAGCCTTCCGGCAACCCGGA +
Preference number: 6 (lower is better)
Translates to: FKSPQERLQQYQGSG*PDTAPGAAAFRQPG
Trigger: TCCGGGTTGCCGGAAGGCTGCAGCGCCCGGAGCGGTGTCGGGCAAACCGCTACCCTGGTATTGCTGGAGCCTCTCCTGGGGACTTTTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000446510.6
ENST00000528092.5
ENST00000530697.6
ENST00000532470.3
ENST00000534635.5
ENST00000617650.5
ENST00000678950.1
CDS GCA 72 bp ACCGTAACGACATCTCTGCCGGGAGTCCCTTCAGACTaGGGTCTCCAGGTAACCGCACTCCAACAGAAGCAG +
Preference number: 6 (lower is better)
Translates to: TVTTSLPGVPSD*GLQVTALQQKQ
Trigger: CTGCTTCTGTTGGAGTGCGGTTACCTGGAGACCGCAGTCTGAAGGGACTCCCGGCAGAGATGTCGTTACGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532470.3
ENST00000617650.5
ENST00000678480.1
CDS CAA 72 bp GGCCACAGTATCTCCAGGGTCGTCAGGGGTGTAGTTTaGAGTCGCGCTCCTAAGCATCCAGACAGGCAGGAC +
Preference number: 6 (lower is better)
Translates to: GHSISRVVRGVV*SRAPKHPDRQD
Trigger: GTCCTGCCTGTCTGGATGCTTAGGAGCGCGACTCAAAACTACACCCCTGACGACCCTGGAGATACTGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617650.5
ENST00000678480.1
CDS CAA 90 bp CCTTCAGACTGCGGTCTCCAGGTAACCGCACTCCAACAGAAGCAGTaGTGCTTCCTATCGGGTCACCTGTTCAAAAGTCCCCAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: PSDCGLQVTALQQKQ*CFLSGHLFKSPQER
Trigger: CCTCTCCTGGGGACTTTTGAACAGGTGACCCGATAGGAAGCACAACTGCTTCTGTTGGAGTGCGGTTACCTGGAGACCGCAGTCTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532470.3
ENST00000617650.5
CDS GCA 72 bp GCCACTCTCACCTCCCATTCCCTAGTTTTCCTCCTTTaGTCCCGTCTAGTCACTTCGCACCTTCGGCTAGTC +
Preference number: 6 (lower is better)
Translates to: ATLTSHSLVFLL*SRLVTSHLRLV
Trigger: GACTAGCCGAAGGTGCGAAGTGACTAGACGGGAGCAAAGGAGGAAAACTAGGGAATGGGAGGTGAGAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000446510.6
ENST00000530697.6
ENST00000532470.3
ENST00000534635.5
ENST00000617650.5
ENST00000678950.1
CDS GCA 72 bp GGTCTCCAGGTAACCGCACTCCAACAGAAGCAGTTGTaGTTCCTATCGGGTCACCTGTTCAAAAGTCCCCAG +
Preference number: 6 (lower is better)
Translates to: GLQVTALQQKQL*FLSGHLFKSPQ
Trigger: CTGGGGACTTTTGAACAGGTGACCCGATAGGAAGCACAACTGCTTCTGTTGGAGTGCGGTTACCTGGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532470.3
ENST00000617650.5
CDS CAA 72 bp AGCCACTCTCACCTCCCATTCCCTAGTTTTCCTCCTTaGCTCCCGTCTAGTCACTTCGCACCTTCGGCTAGT +
Preference number: 6 (lower is better)
Translates to: SHSHLPFPSFPP*LPSSHFAPSAS
Trigger: ACTAGCCGAAGGTGCGAAGTGACTAGACGGGAGCAAAGGAGGAAAACTAGGGAATGGGAGGTGAGAGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000446510.6
ENST00000530697.6
ENST00000532470.3
ENST00000534635.5
ENST00000617650.5
ENST00000678950.1
CDS CAA 72 bp TGCGGTCTCCAGGTAACCGCACTCCAACAGAAGCAGTaGTGCTTCCTATCGGGTCACCTGTTCAAAAGTCCC +
Preference number: 6 (lower is better)
Translates to: CGLQVTALQQKQ*CFLSGHLFKSP
Trigger: GGGACTTTTGAACAGGTGACCCGATAGGAAGCACAACTGCTTCTGTTGGAGTGCGGTTACCTGGAGACCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532470.3
ENST00000617650.5
CDS CAA 72 bp ACAGTATCTTTCTCCAGGGTCGTCAGGGGTGTAGTTTaGAGTCGCGCTCCTAAGCATCCAGACAGGCAGGAC +
Preference number: 6 (lower is better)
Translates to: TVSFSRVVRGVV*SRAPKHPDRQD
Trigger: GTCCTGCCTGTCTGGATGCTTAGGAGCGCGACTCAAAACTACACCCCTGACGACCCTGGAGAAAGATACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532470.3
CDS CAA 90 bp GTCGGTGTCAGCCACTCTCACCTCCCATTCCCTAGTTTTCCTCCTTaGCTCCCGTCTAGTCACTTCGCACCTTCGGCTAGTCTTTATTCA +
Preference number: 6 (lower is better)
Translates to: VGVSHSHLPFPSFPP*LPSSHFAPSASLYS
Trigger: TGAATAAAGACTAGCCGAAGGTGCGAAGTGACTAGACGGGAGCAAAGGAGGAAAACTAGGGAATGGGAGGTGAGAGTGGCTGACACCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000446510.6
ENST00000530697.6
ENST00000532470.3
ENST00000534635.5
ENST00000617650.5
ENST00000678950.1
CDS CAA 90 bp TTTCACAGTACAGTATCTTTCTCCAGGGTCGTCAGGGGTGTAGTTTaGAGTCGCGCTCCTAAGCATCCAGACAGGCAGGACACCGTAACG +
Preference number: 6 (lower is better)
Translates to: FHSTVSFSRVVRGVV*SRAPKHPDRQDTVT
Trigger: CGTTACGGTGTCCTGCCTGTCTGGATGCTTAGGAGCGCGACTCAAAACTACACCCCTGACGACCCTGGAGAAAGATACTGTACTGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532470.3
CDS CAA 90 bp TGTTCACTGTGCTTTCCCAAGAGACATCTGAAAGAAGCAGTAAATTaGAAAGCTGGCCTGGATTTTGTAGGCACCATAGTCAGGCCTCTG +
Preference number: 6 (lower is better)
Translates to: CSLCFPKRHLKEAVN*KAGLDFVGTIVRPL
Trigger: CAGAGGCCTGACTATGGTGCCTACAAAATCCAGGCCAGCTTTCAAATTTACTGCTTCTTTCAGATGTCTCTTGGGAAAGCACAGTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677097.1
CDS TCA 72 bp AGAGAACGGATTCTTGGGAAATGTGGTTCTTTCAGCTaGCGCATGGTGACTCTTTACGGAAAAGGACTACAA +
Preference number: 6 (lower is better)
Translates to: RERILGKCGSFS*RMVTLYGKGLQ
Trigger: TTGTAGTCCTTTTCCGTAAAGAGTCACCATGCGTCAGCTGAAAGAACCACATTTCCCAAGAATCCGTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678060.1
CDS TCA 72 bp TCTTCACGTGAGATGGGTCTCCTGAATACAGCACACTaGTGGGTCTTGATTCTTTATCCAATTTGCCAGTCT +
Preference number: 6 (lower is better)
Translates to: SSREMGLLNTAH*WVLILYPICQS
Trigger: AGACTGGCAAATTGGATAAAGAATCAAGACCCATCAGTGTGCTGTATTCAGGAGACCCATCTCACGTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679127.1
CDS TCA 72 bp TTCTTGGGAAATGTGGTTCTTTCAGCTGACGCATGGTaGCTCTTTACGGAAAAGGACTACAATTCCCAGAAA +
Preference number: 6 (lower is better)
Translates to: FLGNVVLSADAW*LFTEKDYNSQK
Trigger: TTTCTGGGAATTGTAGTCCTTTTCCGTAAAGAGTCACCATGCGTCAGCTGAAAGAACCACATTTCCCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678060.1