Pregenerated sensors for IFT88 (Homo sapiens)
Ensembl gene IDs: ENSG00000032742Ensembl transcript IDs: ENST00000319980.10, ENST00000351808.10, ENST00000389373.3, ENST00000461115.5, ENST00000470695.1, ENST00000482172.5, ENST00000537103.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCAAATACATCAGTTGCTTGACTGGATCCAAGCTGATCATGAACTaGGTGGTAAAAGATAATGACACTGGCAGTTTCAGAGAAATTAAA | + |
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Preference number: 1 (lower is better) Translates to: LKYISCLTGSKLIMN*VVKDNDTGSFREIK Trigger: TTTAATTTCTCTGAAACTGCCAGTGTCATTATCTTTTACCACCCAGTTCATGATCAGCTTGGATCCAGTCAAGCAACTGATGTATTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATAAGTTAGTGCTTCAATaGTACCCTACAAGCTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: CLTLPNVVAKAYQNKERNKLVLQ*YPTSFR Trigger: TCTGAAGCTTGTAGGGTATCATTGAAGCACTAACTT...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATGAGGGTAACAGTCTTTaGAGACCTCATTATATCTAC | + |
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Preference number: 2 (lower is better) Translates to: CLTLPNVVAKAYQNKERNEGNSL*RPHYIY Trigger: GTAGATATAATGAGGTCTCCAAAGACTGTTACCCTC...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATTATCACACAATAATCTaGCAGATTATCCTCATCACT | + |
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Preference number: 2 (lower is better) Translates to: CLTLPNVVAKAYQNKERNYHTII*QIILIT Trigger: AGTGATGAGGATAATCTGGCAGATTATTGTGTGATA...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATACATTAACACATTTCTaGTTTTCTAACCAAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: CLTLPNVVAKAYQNKERNTLTHF*FSNQEQ Trigger: CTGCTCTTGGTTAGAAAAGCAGAAATGTGTTAATGT...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| 3UTR CCA 72 bp | GTACTCAAACAGTCTCAAATACATCAGTTGCTTGACTaGATCCAAGCTGATCATGAACTGGGTGGTAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: VLKQSQIHQLLD*IQADHELGGKR Trigger: TCTTTTACCACCCAGTTCATGATCAGCTTGGATCCAGTCAAGCAACTGATGTATTTGAGACTGTTTGAGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR CCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATAGCCTCGGGAGTAACTaGGATTACAGGTGCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: CLTLPNVVAKAYQNKERNSLGSN*DYRCLP Trigger: TGGCAGGCACCTGTAATCCCAGTTACTCCCGAGGCT...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR GCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATGGGATTACAGGTGCCTaGCACAACACCCGGCTAATT | + |
|
Preference number: 4 (lower is better) Translates to: CLTLPNVVAKAYQNKERNGITGA*HNTRLI Trigger: AATTAGCCGGGTGTTGTGGCAGGCACCTGTAATCCC...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR CCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATGCTCTGCACCTAGGCTaGAGTACAGTGGCACTATCT | + |
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Preference number: 4 (lower is better) Translates to: CLTLPNVVAKAYQNKERNALHLG*STVALS Trigger: AGATAGTGCCACTGTACTCCAGCCTAGGTGCAGAGC...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR TCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATCATATAATACAGGGCTaGGAGATTGGTTGCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: CLTLPNVVAKAYQNKERNHIIQG*EIGCSC Trigger: GCAGCTGCAACCAATCTCTCAGCCCTGTATTATATG...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR GCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATGTTCACAGCTATATCTaGATAGCTGCTGGCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLTLPNVVAKAYQNKERNVHSYI*IAAGLC Trigger: GCACAAGCCAGCAGCTATGCAGATATAGCTGTGAAC...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR TCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATGCTAGCTCTACATATTaGGAAGCTTTCACCACTTCC | + |
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Preference number: 4 (lower is better) Translates to: CLTLPNVVAKAYQNKERNASSTY*EAFTTS Trigger: GGAAGTGGTGAAAGCTTCTCAATATGTAGAGCTAGC...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR TCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATTTTCGTAGGATTGCGTaGAGTTTCAGGAAACAGTCC | + |
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Preference number: 4 (lower is better) Translates to: CLTLPNVVAKAYQNKERNFRRIA*SFRKQS Trigger: GGACTGTTTCCTGAAACTTCACGCAATCCTACGAAA...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR GCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATGAGATTGGTTGCAGCTaGACTTTTCACTCTACTGTC | + |
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Preference number: 4 (lower is better) Translates to: CLTLPNVVAKAYQNKERNEIGCS*TFHSTV Trigger: GACAGTAGAGTGAAAAGTGCAGCTGCAACCAATCTC...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| 3UTR CAA 72 bp | AAAATGTACTCAAACAGTCTCAAATACATCAGTTGCTaGACTGGATCCAAGCTGATCATGAACTGGGTGGTA | + |
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Preference number: 4 (lower is better) Translates to: KMYSNSLKYISC*TGSKLIMNWVV Trigger: TACCACCCAGTTCATGATCAGCTTGGATCCAGTCAAGCAACTGATGTATTTGAGACTGTTTGAGTACATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR GCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATCTCAAATACATCAGTTaGTTGACTGGATCCAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: CLTLPNVVAKAYQNKERNLKYIS*LTGSKL Trigger: CAGCTTGGATCCAGTCAAGCAACTGATGTATTTGAG...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR CCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATTATCTGCATAGCTGCTaGCTTGTGCAAAATCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: CLTLPNVVAKAYQNKERNYLHSC*LVQNPF Trigger: GAAAGGATTTTGCACAAGCCAGCAGCTATGCAGATA...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR CCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATCATCAGTTGCTTGACTaGATCCAAGCTGATCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: CLTLPNVVAKAYQNKERNHQLLD*IQADHE Trigger: TTCATGATCAGCTTGGATCCAGTCAAGCAACTGATG...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR GCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATATAGCTGCTGGCTTGTaGAAAATCCTTTCCCATATA | + |
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Preference number: 4 (lower is better) Translates to: CLTLPNVVAKAYQNKERNIAAGL*KILSHI Trigger: TATATGGGAAAGGATTTTGCACAAGCCAGCAGCTAT...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR CCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATCTCTTCCCAATGTTGTaGCCAAAGCTTACCAAAATA | + |
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Preference number: 4 (lower is better) Translates to: CLTLPNVVAKAYQNKERNLFPML*PKLTKI Trigger: TATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAG...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR TCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATGTTACTAAGTTAGTATaGGGATCATCACTTGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: CLTLPNVVAKAYQNKERNVTKLV*GSSLGE Trigger: TTCACCAAGTGATGATCCTCATACTAACTTAGTAAC...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR TCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATTTTTCTCGGTCAGCCTaGATAAATGTAACTCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: CLTLPNVVAKAYQNKERNFSRSA*INVTPI Trigger: TATTGGAGTTACATTTATTCAGGCTGACCGAGAAAA...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR GCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATGCACCAATCATAACCTaGAGCAAAAGATGTTTCAAT | + |
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Preference number: 4 (lower is better) Translates to: CLTLPNVVAKAYQNKERNAPIIT*SKRCFN Trigger: ATTGAAACATCTTTTGCTGCAGGTTATGATTGGTGC...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR CCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATTATATTTTTCTGCCATaGCTTTCCTTTCACGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: CLTLPNVVAKAYQNKERNYIFLP*LSFHVP Trigger: TGGAACGTGAAAGGAAAGCCATGGCAGAAAAATATA...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR CCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATGTGAGCTACTGTGCCTaGCCTAAAACTAAAATTTTT | + |
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Preference number: 4 (lower is better) Translates to: CLTLPNVVAKAYQNKERNVSYCA*PKTKIF Trigger: AAAAATTTTAGTTTTAGGCCAGGCACAGTAGCTCAC...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR CCA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATTTATTTCCAGATCATTaGCTAGCTCTACATATTGAG | + |
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Preference number: 4 (lower is better) Translates to: CLTLPNVVAKAYQNKERNLFPDH*LALHIE Trigger: CTCAATATGTAGAGCTAGCCAATGATCTGGAAATAA...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS CCA 90 bp | GGGAAGCGGGCGACAGTTATTCGGGCCCAGGGACGACGCAGCGGTTaGCCAAAGCGCGACGCCGAGCCGTTGCCAAGCGCGGAATCCAAG | + |
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Preference number: 5 (lower is better) Translates to: GKRATVIRAQGRRSG*PKRDAEPLPSAESK Trigger: CTTGGATTCCGCGCTTGGCAACGGCTCGGCGTCGCGCTTTGGCCAACCGCTGCGTCGTCCCTGGGCCCGAATAACTGTCGCCCGCTTCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319980.10 ENST00000351808.10 |
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| CDS GCA 90 bp | TTTCTTCCTCCCTTCTCCTTCAGAGATGGTGTTCTCACTCATGTCTaGCAACTCAGCCCCTGGCCTGGCACTTGTCAGGATCAGATCCTC | + |
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Preference number: 5 (lower is better) Translates to: FLPPFSFRDGVLTHV*QLSPWPGTCQDQIL Trigger: GAGGATCTGATCCTGACAAGTGCCAGGCCAGGGGCTGAGTTGGCAGACATGAGTGAGAACACCATCTCTGAAGGAGAAGGGAGGAAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461115.5 |
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| CDS CCA 90 bp | TCCTTCAGAGATGGTGTTCTCACTCATGTCTGCCAACTCAGCCCCTaGCCTGGCACTTGTCAGGATCAGATCCTCTATACTCCTCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: SFRDGVLTHVCQLSP*PGTCQDQILYTPQS Trigger: GGACTGAGGAGTATAGAGGATCTGATCCTGACAAGTGCCAGGCCAGGGGCTGAGTTGGCAGACATGAGTGAGAACACCATCTCTGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461115.5 |
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| CDS CCA 90 bp | CAGAGATGGTGTTCTCACTCATGTCTGCCAACTCAGCCCCTGGCCTaGCACTTGTCAGGATCAGATCCTCTATACTCCTCAGTCCACTTA | + |
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Preference number: 5 (lower is better) Translates to: QRWCSHSCLPTQPLA*HLSGSDPLYSSVHL Trigger: TAAGTGGACTGAGGAGTATAGAGGATCTGATCCTGACAAGTGCCAGGCCAGGGGCTGAGTTGGCAGACATGAGTGAGAACACCATCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461115.5 |
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| CDS GCA 90 bp | TGCAGAGCCTCTCAAAGCTGCTTTGGTAAAACCAGCTGCTCTCACTaGTGTCATGGGTCTAGTAACTCCATCCTGAATAGCCCCTGTCAT | + |
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Preference number: 5 (lower is better) Translates to: CRASQSCFGKTSCSH*CHGSSNSILNSPCH Trigger: ATGACAGGGGCTATTCAGGATGGAGTTACTAGACCCATGACAGCAGTGAGAGCAGCTGGTTTTACCAAAGCAGCTTTGAGAGGCTCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000319980.10 ENST00000351808.10 |
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| CDS CCA 90 bp | TTCTTCTTCCGATGTGGCCCAGGGAAGCCAAAGATTGGACACCCTTaGTCTACTTCCAAGAAGCCTACTGCAGTTTTTCACGTTTTTGGA | + |
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Preference number: 5 (lower is better) Translates to: FFFRCGPGKPKIGHP*STSKKPTAVFHVFG Trigger: TCCAAAAACGTGAAAAACTGCAGTAGGCTTCTTGGAAGTAGACCAAGGGTGTCCAATCTTTGGCTTCCCTGGGCCACATCGGAAGAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000319980.10 |
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| CDS CCA 90 bp | GTTTGTGAATTTCATGTGTGGCCCAAGACAATTCTTCTTCCGATGTaGCCCAGGGAAGCCAAAGATTGGACACCCTTGGTCTACTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: VCEFHVWPKTILLPM*PREAKDWTPLVYFQ Trigger: TTGGAAGTAGACCAAGGGTGTCCAATCTTTGGCTTCCCTGGGCCACATCGGAAGAAGAATTGTCTTGGGCCACACATGAAATTCACAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319980.10 ENST00000389373.3 |
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| CDS CCA 90 bp | CACATTTTGCATCATTTGTACCTTAGTGTTTGTGAATTTCATGTGTaGCCCAAGACAATTCTTCTTCCGATGTGGCCCAGGGAAGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: HILHHLYLSVCEFHV*PKTILLPMWPREAK Trigger: TTTGGCTTCCCTGGGCCACATCGGAAGAAGAATTGTCTTGGGCCACACATGAAATTCACAAACACTAAGGTACAAATGATGCAAAATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319980.10 ENST00000389373.3 |
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| CDS CCA 90 bp | ATTGTAGTCATTATAGCCGGAATAAAGATCATCTTCATCTGTCTCTaGAGCCAGGTGCACATTTTGCATCATTTGTACCTCACGCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: IVVIIAGIKIIFICL*SQVHILHHLYLTLR Trigger: CCTCAGCGTGAGGTACAAATGATGCAAAATGTGCACCTGGCTCCAGAGACAGATGAAGATGATCTTTATTCCGGCTATAATGACTACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000351808.10 |
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| CDS TCA 90 bp | TGTTACTGCTACTTTCATAAGGTTCATTTGTCCCAGGTAAAGCTCTaGGTCTGGCACTTAGTCGTTCACCTTTACTACTGGCACTATAGT | + |
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Preference number: 5 (lower is better) Translates to: CYCYFHKVHLSQVKL*VWHLVVHLYYWHYS Trigger: ACTATAGTGCCAGTAGTAAAGGTGAACGACTAAGTGCCAGACTCAGAGCTTTACCTGGGACAAATGAACCTTATGAAAGTAGCAGTAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000319980.10 ENST00000351808.10 ENST00000482172.5 |
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| CDS-3UTR CAA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATTACAGGGCTGAGAGATaGGTTGCAGCTGCACTTTTC | + |
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Preference number: 5 (lower is better) Translates to: CLTLPNVVAKAYQNKERNYRAER*VAAALF Trigger: GAAAAGTGCAGCTGCAACCAATCTCTCAGCCCTGTA...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR CAA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATTTCTGGAGTTGTAACTaGTTCTCGCTGTCTCACCAG | + |
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Preference number: 5 (lower is better) Translates to: CLTLPNVVAKAYQNKERNFWSCN*FSLSHQ Trigger: CTGGTGAGACAGCGAGAACAAGTTACAACTCCAGAA...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR CAA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATTGCATAGCTGCTGGCTaGTGCAAAATCCTTTCCCAT | + |
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Preference number: 5 (lower is better) Translates to: CLTLPNVVAKAYQNKERNCIAAG*CKILSH Trigger: ATGGGAAAGGATTTTGCACAAGCCAGCAGCTATGCA...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS TCA 90 bp | TTTCGTCCCCTTCTCCCTACAAATGCCCCTTTCTATATTCTGACCTaGAAGATCCAACTCTCTATGAAATCTTTCCTGAAAGTCCTAAAT | + |
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Preference number: 5 (lower is better) Translates to: FRPLLPTNAPFYILT*KIQLSMKSFLKVLN Trigger: ATTTAGGACTTTCAGGAAAGATTTCATAGAGAGTTGGATCTTTCAGGTCAGAATATAGAAAGGGGCATTTGTAGGGAGAAGGGGACGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000461115.5 |
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| CDS GCA 90 bp | AGTAAGAGCTGCTGGATTATATCTATCAGAGTTCACAGCTATATCTaGATAGCTGCTGGCTTGTGCAAAATCCTTTCCCATATAATACAG | + |
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Preference number: 5 (lower is better) Translates to: SKSCWIISIRVHSYI*IAAGLCKILSHIIQ Trigger: CTGTATTATATGGGAAAGGATTTTGCACAAGCCAGCAGCTATGCAGATATAGCTGTGAACTCTGATAGATATAATCCAGCAGCTCTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000319980.10 ENST00000351808.10 ENST00000537103.2 |
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| CDS-3UTR CAA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATCACTGTTTCGTAGGATaGCGTGAAGTTTCAGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: CLTLPNVVAKAYQNKERNHCFVG*REVSGN Trigger: GTTTCCTGAAACTTCACGCAATCCTACGAAACAGTG...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS TCA 90 bp | TTATCTCCTTCACGATCATATAATTCTCCTAGCTTAGATAAAACTTaGGGATCGGTTGGAATAACACTGACCACCTGCATTAGCCATTCA | + |
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Preference number: 5 (lower is better) Translates to: LSPSRSYNSPSLDKT*GSVGITLTTCISHS Trigger: TGAATGGCTAATGCAGGTGGTCAGTGTTATTCCAACCGATCCTCAAGTTTTATCTAAGCTAGGAGAATTATATGATCGTGAAGGAGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319980.10 ENST00000351808.10 |
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| CDS CCA 90 bp | ATTGTAGTCATTATAGCCGGAATAAAGATCATCTTCATCTGTCTCTaGAGCCAGGTGCACATTTTGCATCATTTGTACCTTAGTGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: IVVIIAGIKIIFICL*SQVHILHHLYLSVC Trigger: ACAAACACTAAGGTACAAATGATGCAAAATGTGCACCTGGCTCCAGAGACAGATGAAGATGATCTTTATTCCGGCTATAATGACTACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319980.10 ENST00000389373.3 |
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| CDS-3UTR CAA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATCCTTTCACGTTCCATTaGCCTGAGGTGATCATTTTT | + |
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Preference number: 5 (lower is better) Translates to: CLTLPNVVAKAYQNKERNPFTFH*PEVIIF Trigger: AAAAATGATCACCTCAGGCAAATGGAACGTGAAAGG...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR CAA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATAAATACATCAGTTGCTaGACTGGATCCAAGCTGATC | + |
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Preference number: 5 (lower is better) Translates to: CLTLPNVVAKAYQNKERNKYISC*TGSKLI Trigger: GATCAGCTTGGATCCAGTCAAGCAACTGATGTATTT...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR CAA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATTCTCAAATACATCAGTaGCTTGACTGGATCCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CLTLPNVVAKAYQNKERNSQIHQ*LDWIQA Trigger: AGCTTGGATCCAGTCAAGCAACTGATGTATTTGAGA...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS-3UTR CAA 90 bp | TGTTTAACTCTTCCCAATGTTGTGGCCAAAGCTTACCAAAATAAGGAGAGAAATATCCTCATTTGCTTATaGACACTTGGAACTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CLTLPNVVAKAYQNKERNILICL*TLGTWS Trigger: AGACCAAGTTCCAAGTGTCAATAAGCAAATGAGGAT...ATTTCTCTCCTTATTTTGGTAAGCTTTGGCCACAACATTGGGAAGAGTTAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS CCA 72 bp | GCGACAGTTATTCGGGCCCAGGGACGACGCAGCGGTTaGCCAAAGCGCGACGCCGAGCCGTTGCCAAGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: ATVIRAQGRRSG*PKRDAEPLPSA Trigger: CGCGCTTGGCAACGGCTCGGCGTCGCGCTTTGGCCAACCGCTGCGTCGTCCCTGGGCCCGAATAACTGTCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000319980.10 ENST00000351808.10 ENST00000389373.3 |
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| CDS CAA 72 bp | GGCGACAGTTATTCGGGCCCAGGGACGACGCAGCGGTaGGCCAAAGCGCGACGCCGAGCCGTTGCCAAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GDSYSGPGTTQR*AKARRRAVAKR Trigger: GCGCTTGGCAACGGCTCGGCGTCGCGCTTTGGCCAACCGCTGCGTCGTCCCTGGGCCCGAATAACTGTCGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000319980.10 ENST00000351808.10 ENST00000389373.3 |
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| CDS GCA 72 bp | GACGCAGCGGTTGGCCAAAGCGCGACGCCGAGCCGTTaGCAAGCGCGGAATCCAAGGAAGCCGCTCCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: DAAVGQSATPSR*QARNPRKPLPQ Trigger: CTGTGGGAGCGGCTTCCTTGGATTCCGCGCTTGGCAACGGCTCGGCGTCGCGCTTTGGCCAACCGCTGCGTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319980.10 |
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| CDS CAA 72 bp | CGACGCAGCGGTTGGCCAAAGCGCGACGCCGAGCCGTaGCCAAGCGCGGAATCCAAGGAAGCCGCTCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RRSGWPKRDAEP*PSAESKEAAPT Trigger: TGTGGGAGCGGCTTCCTTGGATTCCGCGCTTGGCAACGGCTCGGCGTCGCGCTTTGGCCAACCGCTGCGTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319980.10 |
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| CDS CAA 90 bp | AGGGAAGCGGGCGACAGTTATTCGGGCCCAGGGACGACGCAGCGGTaGGCCAAAGCGCGACGCCGAGCCGTTGCCAAGCGCGGAATCCAA | + |
|
Preference number: 6 (lower is better) Translates to: REAGDSYSGPGTTQR*AKARRRAVAKRGIQ Trigger: TTGGATTCCGCGCTTGGCAACGGCTCGGCGTCGCGCTTTGGCCAACCGCTGCGTCGTCCCTGGGCCCGAATAACTGTCGCCCGCTTCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319980.10 ENST00000351808.10 |
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| CDS CAA 72 bp | TTCTGGCCACTATCACCGCTAGCACTTCCTTCTCTTTaGCCACGGGAGCCCCCACTGCCATCTCTGCCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: FWPLSPLALPSL*PREPPLPSLPD Trigger: GTCAGGCAGAGATGGCAGTGGGGGCTCCCGTGGCAAAAGAGAAGGAAGTGCTAGCGGTGATAGTGGCCAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000319980.10 ENST00000351808.10 ENST00000482172.5 |
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| CDS GCA 72 bp | CCCTTCTCCTTCAGAGATGGTGTTCTCACTCATGTCTaGCAACTCAGCCCCTGGCCTGGCACTTGTCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PFSFRDGVLTHV*QLSPWPGTCQD Trigger: ATCCTGACAAGTGCCAGGCCAGGGGCTGAGTTGGCAGACATGAGTGAGAACACCATCTCTGAAGGAGAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461115.5 |
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| CDS CCA 72 bp | TGTTCTCACTCATGTCTGCCAACTCAGCCCCTGGCCTaGCACTTGTCAGGATCAGATCCTCTATACTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CSHSCLPTQPLA*HLSGSDPLYSS Trigger: TGAGGAGTATAGAGGATCTGATCCTGACAAGTGCCAGGCCAGGGGCTGAGTTGGCAGACATGAGTGAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461115.5 |
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| CDS CAA 90 bp | TGGTGTTCTCACTCATGTCTGCCAACTCAGCCCCTGGCCTGGCACTaGTCAGGATCAGATCCTCTATACTCCTCAGTCCACTTACCATTC | + |
|
Preference number: 6 (lower is better) Translates to: WCSHSCLPTQPLAWH*SGSDPLYSSVHLPF Trigger: GAATGGTAAGTGGACTGAGGAGTATAGAGGATCTGATCCTGACAAGTGCCAGGCCAGGGGCTGAGTTGGCAGACATGAGTGAGAACACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461115.5 |
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| CDS CAA 90 bp | GCCCAAGACAATTCTTCTTCCGATGTGGCCCAGGGAAGCCAAAGATaGGACACCCTTGGTCTACTTCCAAGAAGCCTACTGCAGTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: AQDNSSSDVAQGSQR*DTLGLLPRSLLQFL Trigger: GAGAAACTGCAGTAGGCTTCTTGGAAGTAGACCAAGGGTGTCCAATCTTTGGCTTCCCTGGGCCACATCGGAAGAAGAATTGTCTTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389373.3 |
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| CDS GCA 72 bp | CTTCTCTTTTGCCACGGGAGCCCCCACTGCCATCTCTaGCTGACTTTATGCGCTGTTCCCTTATTTCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLFCHGSPHCHL*LTLCAVPLFLS Trigger: TGAAAGAAATAAGGGAACAGCGCATAAAGTCAGGCAGAGATGGCAGTGGGGGCTCCCGTGGCAAAAGAGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000319980.10 ENST00000351808.10 ENST00000470695.1 ENST00000482172.5 |
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| CDS CCA 72 bp | ATTCTTCTTCCGATGTGGCCCAGGGAAGCCAAAGATTaGACACCCTTGGTCTACTTCCAAGAAGCCTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: ILLPMWPREAKD*TPLVYFQEAYC Trigger: GCAGTAGGCTTCTTGGAAGTAGACCAAGGGTGTCCAATCTTTGGCTTCCCTGGGCCACATCGGAAGAAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319980.10 ENST00000389373.3 |
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| CDS CAA 72 bp | ATCATCTTCATCTGTCTCTGGAGCCAGGTGCACATTTaGCATCATTTGTACCTCACGCTGAGGGAAGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: IIFICLWSQVHI*HHLYLTLREAG Trigger: GCCCGCTTCCCTCAGCGTGAGGTACAAATGATGCAAAATGTGCACCTGGCTCCAGAGACAGATGAAGATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000351808.10 |
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| CDS CAA 90 bp | GCCCAAGACAATTCTTCTTCCGATGTGGCCCAGGGAAGCCAAAGATaGGACACCCTTGGTCTACTTCCAAGAAGCCTACTGCAGTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: AQDNSSSDVAQGSQR*DTLGLLPRSLLQFF Trigger: GAAAAACTGCAGTAGGCTTCTTGGAAGTAGACCAAGGGTGTCCAATCTTTGGCTTCCCTGGGCCACATCGGAAGAAGAATTGTCTTGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319980.10 |
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| CDS CAA 72 bp | AATTCTTCTTCCGATGTGGCCCAGGGAAGCCAAAGATaGGACACCCTTGGTCTACTTCCAAGAAGCCTACTG | + |
|
Preference number: 6 (lower is better) Translates to: NSSSDVAQGSQR*DTLGLLPRSLL Trigger: CAGTAGGCTTCTTGGAAGTAGACCAAGGGTGTCCAATCTTTGGCTTCCCTGGGCCACATCGGAAGAAGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319980.10 ENST00000389373.3 |
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| CDS TCA 72 bp | TCTTTTGCCACGGGAGCCCCCACTGCCATCTCTGCCTaGCTTTATGCGCTGTTCCCTTATTTCTTTCATTTT | + |
|
Preference number: 6 (lower is better) Translates to: SFATGAPTAISA*LYALFPYFFHF Trigger: AAAATGAAAGAAATAAGGGAACAGCGCATAAAGTCAGGCAGAGATGGCAGTGGGGGCTCCCGTGGCAAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000319980.10 ENST00000351808.10 ENST00000470695.1 ENST00000482172.5 |
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| CDS CAA 90 bp | ATTCTTCTTCCGATGTGGCCCAGGGAAGCCAAAGATTGGACACCCTaGGTCTACTTCCAAGAAGCCTACTGCAGTTTTTCACGTTTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: ILLPMWPREAKDWTP*VYFQEAYCSFSRFW Trigger: CCAAAAACGTGAAAAACTGCAGTAGGCTTCTTGGAAGTAGACCAAGGGTGTCCAATCTTTGGCTTCCCTGGGCCACATCGGAAGAAGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000319980.10 |
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| CDS GCA 72 bp | TCTCAAAGCTGCTTTGGTAAAACCAGCTGCTCTCACTaGTGTCATGGGTCTAGTAACTCCATCCTGAATAGC | + |
|
Preference number: 6 (lower is better) Translates to: SQSCFGKTSCSH*CHGSSNSILNS Trigger: GCTATTCAGGATGGAGTTACTAGACCCATGACAGCAGTGAGAGCAGCTGGTTTTACCAAAGCAGCTTTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319980.10 ENST00000351808.10 |
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| CDS CCA 72 bp | GGCTGCAGTTTTTGGTCGTTCTATTTGAGGGCCAAGTaGGTCCACATAGGAGGCATCTATTTCTTTGTTACT | + |
|
Preference number: 6 (lower is better) Translates to: GCSFWSFYLRAK*VHIGGIYFFVT Trigger: AGTAACAAAGAAATAGATGCCTCCTATGTGGACCCACTTGGCCCTCAAATAGAACGACCAAAAACTGCAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000319980.10 ENST00000351808.10 ENST00000482172.5 |
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| CDS CCA 72 bp | ATCATCCTCATCGATCCTTTTCTTGGCTGCAGTTTTTaGTCGTTCTATTTGAGGGCCAAGTGGGTCCACATA | + |
|
Preference number: 6 (lower is better) Translates to: IILIDPFLGCSF*SFYLRAKWVHI Trigger: TATGTGGACCCACTTGGCCCTCAAATAGAACGACCAAAAACTGCAGCCAAGAAAAGGATCGATGAGGATGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000319980.10 ENST00000351808.10 ENST00000482172.5 |
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| CDS CAA 72 bp | AATCATCCTCATCGATCCTTTTCTTGGCTGCAGTTTTaGGTCGTTCTATTTGAGGGCCAAGTGGGTCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: NHPHRSFSWLQF*VVLFEGQVGPH Trigger: ATGTGGACCCACTTGGCCCTCAAATAGAACGACCAAAAACTGCAGCCAAGAAAAGGATCGATGAGGATGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000319980.10 ENST00000351808.10 ENST00000482172.5 |
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| CDS CAA 90 bp | ATCCTCATCGATCCTTTTCTTGGCTGCAGTTTTTGGTCGTTCTATTaGAGGGCCAAGTGGGTCCACATAGGAGGCATCTATTTCTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: ILIDPFLGCSFWSFY*RAKWVHIGGIYFFV Trigger: AACAAAGAAATAGATGCCTCCTATGTGGACCCACTTGGCCCTCAAATAGAACGACCAAAAACTGCAGCCAAGAAAAGGATCGATGAGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000319980.10 ENST00000351808.10 ENST00000482172.5 |
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| CDS CAA 90 bp | TCCTCTATACTCCTCAGTCCACTTACCATTCTCCACCAATATTCTTaGGACCTCTCCCTAGGCATGATCCTTGGGCAGAAATTTAGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SSILLSPLTILHQYS*DLSLGMILGQKFSN Trigger: ATTGCTAAATTTCTGCCCAAGGATCATGCCTAGGGAGAGGTCCAAAGAATATTGGTGGAGAATGGTAAGTGGACTGAGGAGTATAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461115.5 |
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| CDS TCA 72 bp | GGCTTGTGCAAAATCCTTTCCCATATAATACAGGGCTaGGAGATTGGTTGCAGCTGCACTTTTCACTCTACT | + |
|
Preference number: 6 (lower is better) Translates to: GLCKILSHIIQG*EIGCSCTFHST Trigger: AGTAGAGTGAAAAGTGCAGCTGCAACCAATCTCTCAGCCCTGTATTATATGGGAAAGGATTTTGCACAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000319980.10 ENST00000351808.10 ENST00000537103.2 |
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| CDS GCA 72 bp | TCTGCCATGACTAGTCCTCACAGCTTGCTGAAAAGCTaGATCATTCTCCAATTCCTCGATATCATAGATTGG | + |
|
Preference number: 6 (lower is better) Translates to: SAMTSPHSLLKS*IILQFLDIIDW Trigger: CCAATCTATGATATCGAGGAATTGGAGAATGATGCAGCTTTTCAGCAAGCTGTGAGGACTAGTCATGGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000319980.10 ENST00000351808.10 ENST00000389373.3 |
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| CDS CCA 72 bp | CATCATTTGTACCTTAGTGTTTGTGAATTTCATGTGTaGCCCAAGACAATTCTTCTTCCGATGTGGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: HHLYLSVCEFHV*PKTILLPMWPR Trigger: CCTGGGCCACATCGGAAGAAGAATTGTCTTGGGCCACACATGAAATTCACAAACACTAAGGTACAAATGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319980.10 ENST00000389373.3 |
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| CDS CCA 72 bp | CACTTGTGTAGGCCATATAATACAGGGCTGAGAGATTaGTTGCAGCTGCACTTTTCACTCTACTGTCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: HLCRPYNTGLRD*LQLHFSLYCPF Trigger: AAAAGGACAGTAGAGTGAAAAGTGCAGCTGCAACCAATCTCTCAGCCCTGTATTATATGGCCTACACAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482172.5 |
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| CDS CAA 72 bp | CTATCTGGTAAAGAACTTCGGCACTGTTTCGTAGGATaGCGTGAAGTTTCAGGAAACAGTCCAAAGCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LSGKELRHCFVG*REVSGNSPKPH Trigger: ATGAGGCTTTGGACTGTTTCCTGAAACTTCACGCAATCCTACGAAACAGTGCCGAAGTTCTTTACCAGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000319980.10 ENST00000351808.10 ENST00000537103.2 |
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| CDS CAA 90 bp | ACATATTTGCTATCTGGTAAAGAACTTCGGCACTGTTTCGTAGGATaGCGTGAAGTTTCAGGAAACAGTCCAAAGCCTCATCTAGCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: TYLLSGKELRHCFVG*REVSGNSPKPHLAD Trigger: ATCGGCTAGATGAGGCTTTGGACTGTTTCCTGAAACTTCACGCAATCCTACGAAACAGTGCCGAAGTTCTTTACCAGATAGCAAATATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537103.2 |
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| CDS TCA 72 bp | TACTTTCATAAGGTTCATTTGTCCCAGGTAAAGCTCTaGGTCTGGCACTTAGTCGTTCACCTTTACTACTGG | + |
|
Preference number: 6 (lower is better) Translates to: YFHKVHLSQVKL*VWHLVVHLYYW Trigger: CCAGTAGTAAAGGTGAACGACTAAGTGCCAGACTCAGAGCTTTACCTGGGACAAATGAACCTTATGAAAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000319980.10 ENST00000351808.10 ENST00000482172.5 |
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| CDS GCA 72 bp | TTACCACTTCTTCTGAAACAACTAGCTACCATCAGCTaGCATTTCACTTGTGTAGGCCATATAATACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LPLLLKQLATIS*HFTCVGHIIQG Trigger: GCCCTGTATTATATGGCCTACACAAGTGAAATGGCAGCTGATGGTAGCTAGTTGTTTCAGAAGAAGTGGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482172.5 |
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| CDS CAA 90 bp | GGAATAAAGATCATCTTCATCTGTCTCTGGAGCCAGGTGCACATTTaGCATCATTTGTACCTTAGTGTTTGTGAATTTCATGTGTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GIKIIFICLWSQVHI*HHLYLSVCEFHVWP Trigger: GGGCCACACATGAAATTCACAAACACTAAGGTACAAATGATGCAAAATGTGCACCTGGCTCCAGAGACAGATGAAGATGATCTTTATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319980.10 ENST00000389373.3 |
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| CDS CAA 90 bp | ATATATTTGCTATCTGGTAAAGAACTTCGGCACTGTTTCGTAGGATaGCGTGAAGTTTCAGGAAACAGTCCAAAGCCTCATCTAGCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: IYLLSGKELRHCFVG*REVSGNSPKPHLAD Trigger: ATCGGCTAGATGAGGCTTTGGACTGTTTCCTGAAACTTCACGCAATCCTACGAAACAGTGCCGAAGTTCTTTACCAGATAGCAAATATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319980.10 ENST00000351808.10 |
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| CDS GCA 72 bp | TGCTGGATTATATCTATCAGAGTTCACAGCTATATCTaGATAGCTGCTGGCTTGTGCAAAATCCTTTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: CWIISIRVHSYI*IAAGLCKILSH Trigger: ATGGGAAAGGATTTTGCACAAGCCAGCAGCTATGCAGATATAGCTGTGAACTCTGATAGATATAATCCAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000319980.10 ENST00000351808.10 ENST00000537103.2 |
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| CDS CCA 72 bp | CAAAATCCTTTCCCATATAATACAGGGCTGAGAGATTaGTTGCAGCTGCACTTTTCACTCTACTGTCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: QNPFPYNTGLRD*LQLHFSLYCPF Trigger: AAAAGGACAGTAGAGTGAAAAGTGCAGCTGCAACCAATCTCTCAGCCCTGTATTATATGGGAAAGGATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000319980.10 ENST00000351808.10 ENST00000537103.2 |
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| CDS GCA 72 bp | TGGCATATTCTTGAGCATCTTTTAATCCAAGATCTGTaGAGAGACGAACTAAGAAACGCAGACATTCGACAT | + |
|
Preference number: 6 (lower is better) Translates to: WHILEHLLIQDL*RDELRNADIRH Trigger: ATGTCGAATGTCTGCGTTTCTTAGTTCGTCTCTGCACAGATCTTGGATTAAAAGATGCTCAAGAATATGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319980.10 ENST00000351808.10 |
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| CDS CAA 72 bp | TTAGAAAGAATCTTGGGACAACAGTACTTCACGTTTTaGGAATGTTTCCATCTTTGTGAGGCTAAGTACCGC | + |
|
Preference number: 6 (lower is better) Translates to: LERILGQQYFTF*ECFHLCEAKYR Trigger: GCGGTACTTAGCCTCACAAAGATGGAAACATTCCAAAAACGTGAAGTACTGTTGTCCCAAGATTCTTTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389373.3 |
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| CDS CAA 90 bp | ATTTTAGGCTTAGAAAGAATCTTGGGACAACAGTACTTCACGTTTTaGGAATGTTTCCATCTTTGTGAGGCTAAGTACCGCTTTCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: ILGLERILGQQYFTF*ECFHLCEAKYRFLH Trigger: ATGCAGAAAGCGGTACTTAGCCTCACAAAGATGGAAACATTCCAAAAACGTGAAGTACTGTTGTCCCAAGATTCTTTCTAAGCCTAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000389373.3 |
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| CDS TCA 72 bp | ATCTCTAGCTCTTCCAGCTGTATGTTGCATAATCTATaGTGCGATGCTTATCACTACAATTTTTCTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ISSSSSCMLHNL*CDAYHYNFSSS Trigger: GGAGGAAGAAAAATTGTAGTGATAAGCATCGCATCATAGATTATGCAACATACAGCTGGAAGAGCTAGAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000461115.5 |
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| CDS GCA 72 bp | TGGCATATTCTTGAGCATCTTTTAATCCAAGATCTGTaGAGAGACGAACTAAGAAACGCAGACCTAAATTGT | + |
|
Preference number: 6 (lower is better) Translates to: WHILEHLLIQDL*RDELRNADLNC Trigger: ACAATTTAGGTCTGCGTTTCTTAGTTCGTCTCTGCACAGATCTTGGATTAAAAGATGCTCAAGAATATGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470695.1 |
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| CDS TCA 72 bp | AAGATGTCACTTTCTTTACCAATAACACAAAGGAGTTaGAATACATCTCTAGCTCTTCCAGCTGTATGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: KMSLSLPITQRS*NTSLALPAVCC Trigger: GCAACATACAGCTGGAAGAGCTAGAGATGTATTTCAACTCCTTTGTGTTATTGGTAAAGAAAGTGACATCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461115.5 |
||
| CDS CAA 72 bp | GCCTTTTCTAAGGCCAATTTTAAGTCTCCACAACTATaGGCAATACAGCTTTCTTCTACCAACTCATTTACT | + |
|
Preference number: 6 (lower is better) Translates to: AFSKANFKSPQL*AIQLSSTNSFT Trigger: AGTAAATGAGTTGGTAGAAGAAAGCTGTATTGCCAATAGTTGTGGAGACTTAAAATTGGCCTTAGAAAAGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000319980.10 ENST00000351808.10 |
||
| CDS CAA 90 bp | TATAAGAGAAGCTCTTTCAAAGTACTGAATAGCTTTTTCCCAAAATaGGGTGTCAATGTAATAGGCTCCAAGCCACTCAATGACTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: YKRSSFKVLNSFFPK*GVNVIGSKPLNDFN Trigger: ATTGAAGTCATTGAGTGGCTTGGAGCCTATTACATTGACACCCAATTTTGGGAAAAAGCTATTCAGTACTTTGAAAGAGCTTCTCTTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000319980.10 ENST00000351808.10 |
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| CDS CAA 72 bp | TTTTTCTGCCATGGCTTTCCTTCAGATCTATCCAATTaGTTGCGTATATCAATATTCATTCCTTTTTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: FFCHGFPSDLSN*LRISIFIPFCC Trigger: GCAACAAAAAGGAATGAATATTGATATACGCAACAAATTGGATAGATCTGAAGGAAAGCCATGGCAGAAAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000461115.5 |
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