RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IFT81 (Homo sapiens)

Ensembl gene IDs: ENSG00000122970

Ensembl transcript IDs: ENST00000242591.10, ENST00000361948.8, ENST00000546374.5, ENST00000549009.1, ENST00000550156.5, ENST00000550748.1, ENST00000551273.1, ENST00000552912.5

Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATTCACGGGTCTGATTTCTCTTTACTGATGCTTCTCTCTCTAGGCTaGCTAACTTCTCCTTGGCCTCCTGAAGTTCCTCAGCTTTGGCTT +
Preference number: 1 (lower is better)
Translates to: IHGSDFSLLMLLSLG*LTSPWPPEVPQLWL
Trigger: AAGCCAAAGCTGAGGAACTTCAGGAGGCCAAGGAGAAGTTAGCCAGCCTAGAGAGAGAAGCATCAGTAAAGAGAAATCAGACCCGTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551273.1
3UTR TCA 90 bp GCACACTCTTCATATACTTTAGGCAAGGTGAGCCATTCTTATCAGTaGATGGCAGGAATCCATCCAAGAACCAAGTTCCCCCAGATGCCA +
Preference number: 1 (lower is better)
Translates to: AHSSYTLGKVSHSYQ*MAGIHPRTKFPQMP
Trigger: TGGCATCTGGGGGAACTTGGTTCTTGGATGGATTCCTGCCATTCACTGATAAGAATGGCTCACCTTGCCTAAAGTATATGAAGAGTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361948.8
3UTR CCA 90 bp TTCCCGAAGTTTCTGTTATATGTCAGGTATGCTTGGAGTTTCAAGTaGAAAACAGGACTCATGCTATATAGGTGGGCAGATCACCTGAAG +
Preference number: 1 (lower is better)
Translates to: FPKFLLYVRYAWSFK*KTGLMLYRWADHLK
Trigger: CTTCAGGTGATCTGCCCACCTATATAGCATGAGTCCTGTTTTCCACTTGAAACTCCAAGCATACCTGACATATAACAGAAACTTCGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550156.5
3UTR CAA 90 bp CCATCCAAGAACCAAGTTCCCCCAGATGCCAGCCAAGGGCCAACTTaGCAAGCAGACCTTTCTAGGGATAGCAGTCTCAGGCCTGCATGT +
Preference number: 2 (lower is better)
Translates to: PSKNQVPPDASQGPT*QADLSRDSSLRPAC
Trigger: ACATGCAGGCCTGAGACTGCTATCCCTAGAAAGGTCTGCTTGCAAAGTTGGCCCTTGGCTGGCATCTGGGGGAACTTGGTTCTTGGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361948.8
3UTR-3UTR TCA 90 bp TCTTTACTGATGCTTCTCTCTCTAGGCTGGCTAACTTCTCCTTGGCCTCCTGAACTGTTGCCTATACAGTaGGAGTTTGCCTTCAATGGG +
Preference number: 2 (lower is better)
Translates to: SLLMLLSLGWLTSPWPPELLPIQ*EFAFNG
Trigger: CCCATTGAAGGCAAACTCTCACTGTATAGGCAACAG...TTCAGGAGGCCAAGGAGAAGTTAGCCAGCCTAGAGAGAGAAGCATCAGTAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551273.1
3UTR-3UTR TCA 90 bp CAGTACCATCAAATTCACGGGTCTGATTTCTCTTTACTGATGCTTCTCTCTCTATTCTCCTTGGCCTCCTaGAGTTCCTCAGCTTTGGCT +
Preference number: 2 (lower is better)
Translates to: QYHQIHGSDFSLLMLLSLFSLAS*SSSALA
Trigger: AGCCAAAGCTGAGGAACTTCAGGAGGCCAAGGAGAA...TAGAGAGAGAAGCATCAGTAAAGAGAAATCAGACCCGTGAATTTGATGGTACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551273.1
3UTR-3UTR TCA 90 bp TATTATAATCCCATTAATGGCATTTTGTTTAAGCACAGTGCCCCTATCTACCAAAGTGGGAGGACTGCTTaGGGCCGGGAGTTTAAGACC +
Preference number: 2 (lower is better)
Translates to: YYNPINGILFKHSAPIYQSGRTA*GREFKT
Trigger: GGTCTTAAACTCCCGGCCTCAAGCAGTCCTCCCACT...TTGGTAGATAGGGGCACTGTGCTTAAACAAAATGCCATTAATGGGATTATAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
3UTR-3UTR CCA 90 bp TATCAAGTAAAACCCCAAACGATGACACAAGAATTCACAGTATTAGCCGGTCCTGCTTGGAGTTTCAAGTaGAAAACAGGACTCATGCTA +
Preference number: 2 (lower is better)
Translates to: YQVKPQTMTQEFTVLAGPAWSFK*KTGLML
Trigger: TAGCATGAGTCCTGTTTTCCACTTGAAACTCCAAGC...AGGACCGGCTAATACTGTGAATTCTTGTGTCATCGTTTGGGGTTTTACTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550156.5
3UTR-3UTR TCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGCTCAGAAGACGCCAGTaGTGTCTAAACTATGGAAAA +
Preference number: 2 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMLRRRQ*CLNYGK
Trigger: TTTTCCATAGTTTAGACATCACTGGCGTCTTCTGAG...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
3UTR-3UTR GCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGGGAAAACAGGACTCATaGTATATAGGTGGGCAGATC +
Preference number: 2 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVGKQDS*YIGGQI
Trigger: GATCTGCCCACCTATATAGCATGAGTCCTGTTTTCC...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550156.5
3UTR-3UTR TCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTCTCAGAAGACGCCAGTaGTGTCTAAACTATGGAAAA +
Preference number: 2 (lower is better)
Translates to: GTAERQINVSSEQEILVPLRRRQ*CLNYGK
Trigger: TTTTCCATAGTTTAGACATCACTGGCGTCTTCTGAG...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
3UTR-3UTR TCA 90 bp TGTACCAAAATTCCAGAAAGAAGAAAGAAAGAAAGAGAGAGAGAGAGGAAGGAATGCGTTAGTAACAGATaGTGTGTTGAATTGGCAAAC +
Preference number: 2 (lower is better)
Translates to: CTKIPERRKKERERERKECVSNR*CVELAN
Trigger: GTTTGCCAATTCAACACATCATCTGTTACTAACGCA...TTCCTTCCTCTCTCTCTCTCTTTCTTTCTTTCTTCTTTCTGGAATTTTGGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361948.8
3UTR-3UTR GCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGGTTATATGTCAGGTATaGTTGGAGTTTCAAGTGGAA +
Preference number: 2 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVVICQV*LEFQVE
Trigger: TTCCACTTGAAACTCCAAGCATACCTGACATATAAC...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550156.5
3UTR-3UTR CCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGTATGTCAGGTATGCTTaGAGTTTCAAGTGGAAAACA +
Preference number: 2 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVYVRYA*SFKWKT
Trigger: TGTTTTCCACTTGAAACTCCAAGCATACCTGACATA...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550156.5
3UTR-3UTR GCA 90 bp TATTATAATCCCATTAATGGCATTTTGTTTAAGCACAGTGCCCCTATCTACCAACAGCTTTCTGTCATGTaGAAACTATTGATGACTCTA +
Preference number: 2 (lower is better)
Translates to: YYNPINGILFKHSAPIYQQLSVM*KLLMTL
Trigger: TAGAGTCATCAATAGTTTGCACATGACAGAAAGCTG...TTGGTAGATAGGGGCACTGTGCTTAAACAAAATGCCATTAATGGGATTATAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
3UTR GCA 72 bp ACCAAGTTCCCCCAGATGCCAGCCAAGGGCCAACTTTaGAAGCAGACCTTTCTAGGGATAGCAGTCTCAGGC +
Preference number: 3 (lower is better)
Translates to: TKFPQMPAKGQL*KQTFLGIAVSG
Trigger: GCCTGAGACTGCTATCCCTAGAAAGGTCTGCTTGCAAAGTTGGCCCTTGGCTGGCATCTGGGGGAACTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361948.8
3UTR-3UTR CAA 90 bp ATCCAAGAACCAAGTTCCCCCAGATGCCAGCCAAGGGCCAACTTTGCAAGCAGAAAGTTTCCAGACTTTTaGTCCATTTTAGTCACCCTC +
Preference number: 3 (lower is better)
Translates to: IQEPSSPRCQPRANFASRKFPDF*SILVTL
Trigger: GAGGGTGACTAAAATGGACAAAAAGTCTGGAAACTT...TCTGCTTGCAAAGTTGGCCCTTGGCTGGCATCTGGGGGAACTTGGTTCTTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361948.8
3UTR TCA 72 bp TCATATACTTTAGGCAAGGTGAGCCATTCTTATCAGTaGATGGCAGGAATCCATCCAAGAACCAAGTTCCCC +
Preference number: 3 (lower is better)
Translates to: SYTLGKVSHSYQ*MAGIHPRTKFP
Trigger: GGGGAACTTGGTTCTTGGATGGATTCCTGCCATTCACTGATAAGAATGGCTCACCTTGCCTAAAGTATATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361948.8
3UTR TCA 72 bp TTTACGGGAAATGATAGATGCCTGTTGCCTATACAGTaGGAGTTTGCCTTCAATGGGCTCATTTCTCATCAT +
Preference number: 3 (lower is better)
Translates to: FTGNDRCLLPIQ*EFAFNGLISHH
Trigger: ATGATGAGAAATGAGCCCATTGAAGGCAAACTCTCACTGTATAGGCAACAGGCATCTATCATTTCCCGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551273.1
3UTR CCA 72 bp TTTCTGTTATATGTCAGGTATGCTTGGAGTTTCAAGTaGAAAACAGGACTCATGCTATATAGGTGGGCAGAT +
Preference number: 3 (lower is better)
Translates to: FLLYVRYAWSFK*KTGLMLYRWAD
Trigger: ATCTGCCCACCTATATAGCATGAGTCCTGTTTTCCACTTGAAACTCCAAGCATACCTGACATATAACAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550156.5
3UTR-3UTR CAA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGGGAAGTTTGGCTTTGTaGTTTCAGAAAGCACTGTTT +
Preference number: 3 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMGSLAL*FQKALF
Trigger: AAACAGTGCTTTCTGAAACAACAAAGCCAAACTTCC...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550156.5
3UTR-3UTR CAA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTATATGTCAGGTATGCTaGGAGTTTCAAGTGGAAAAC +
Preference number: 3 (lower is better)
Translates to: GTAERQINVSSEQEILVPICQVC*EFQVEN
Trigger: GTTTTCCACTTGAAACTCCAAGCATACCTGACATAT...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR GCA 90 bp ATCCAAGAACCAAGTTCCCCCAGATGCCAGCCAAGGGCCAACTTTGCAAGCAGAGCCTCTAGCGGGGGCTaGCCTGGGCCCCTCGACAGT +
Preference number: 4 (lower is better)
Translates to: IQEPSSPRCQPRANFASRASSGG*PGPLDS
Trigger: ACTGTCGAGGGGCCCAGGGCAGCCCCCGCTAGAGGC...TCTGCTTGCAAAGTTGGCCCTTGGCTGGCATCTGGGGGAACTTGGTTCTTGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR TCA 90 bp GGAATCCATCCAAGAACCAAGTTCCCCCAGATGCCAGCCAAGGGCCAACTTTGCGGAGGCGGGGAACAATaGAAACCAGGACGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: GIHPRTKFPQMPAKGQLCGGGEQ*KPGRAC
Trigger: ACACGCACGTCCTGGTTTTCATTGTTCCCCGCCTCC...GCAAAGTTGGCCCTTGGCTGGCATCTGGGGGAACTTGGTTCTTGGATGGATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361948.8
3UTR CAA 72 bp AACCAAGTTCCCCCAGATGCCAGCCAAGGGCCAACTTaGCAAGCAGACCTTTCTAGGGATAGCAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: NQVPPDASQGPT*QADLSRDSSLR
Trigger: CCTGAGACTGCTATCCCTAGAAAGGTCTGCTTGCAAAGTTGGCCCTTGGCTGGCATCTGGGGGAACTTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CCA 90 bp TACTTACTAGCAATGGGGTGTCAGGCAAGTCAGCTTAAAACCTCTGCATGTCTCCTCCAGGGAGCGGCCTaGATCCGCTCGAATCCCAGA +
Preference number: 4 (lower is better)
Translates to: YLLAMGCQASQLKTSACLLQGAA*IRSNPR
Trigger: TCTGGGATTCGAGCGGATCCAGGCCGCTCCCTGGAG...GAGACATGCAGAGGTTTTAAGCTGACTTGCCTGACACCCCATTGCTAGTAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR GCA 90 bp GGGTGTCAGGCAAGTCAGCTTAAAACCTCTGCATGTCTCAGATCCTTTATCTGTTTGGGAGAGAAACCGTaGTGCCTGGGTCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GCQASQLKTSACLRSFICLGEKP*CLGPRL
Trigger: CAGCCTGGGACCCAGGCAGCACGGTTTCTCTCCCAA...ACAGATAAAGGATCTGAGACATGCAGAGGTTTTAAGCTGACTTGCCTGACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR GCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGGCCTCTAGCGGGGGCTaGCCTGGGCCCCTCGACAGT +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVASSGG*PGPLDS
Trigger: ACTGTCGAGGGGCCCAGGGCAGCCCCCGCTAGAGGC...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242591.10
CDS-3UTR CCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGGCCTGGGTCCCAGGCTaGCACGAGCATCGACCCGCA +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMAWVPG*HEHRPA
Trigger: TGCGGGTCGATGCTCGTGCCAGCCTGGGACCCAGGC...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242591.10
CDS-3UTR CCA 90 bp TCTTTACTGATGCTTCTCTCTCTAGGCTGGCTAACTTCTCCTTGGCCTCCTGAAGCATCTGCTGCAGCTTaGCGCATGCTTTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLLMLLSLGWLTSPWPPEASAAA*RMLFSW
Trigger: CCAGCTGAAAAGCATGCGCCAAGCTGCAGCAGATGC...TTCAGGAGGCCAAGGAGAAGTTAGCCAGCCTAGAGAGAGAAGCATCAGTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS-3UTR TCA 90 bp CTCCCCACCCTCCTGAATTACCTGACCAATGGAAGTTTGGCTTTGTTGTTTCAGTTCTCCTTGGCCTCCTaGAGTTCCTCAGCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LPTLLNYLTNGSLALLFQFSLAS*SSSALA
Trigger: AGCCAAAGCTGAGGAACTTCAGGAGGCCAAGGAGAA...CTGAAACAACAAAGCCAAACTTCCATTGGTCAGGTAATTCAGGAGGGTGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR GCA 90 bp TCTTTACTGATGCTTCTCTCTCTAGGCTGGCTAACTTCTCCTTGGCCTCCTGAATTCAGGCTTTGCATCTaGTGCAGCTTGGCGCATGCT +
Preference number: 4 (lower is better)
Translates to: SLLMLLSLGWLTSPWPPEFRLCI*CSLAHA
Trigger: AGCATGCGCCAAGCTGCAGCAGATGCAAAGCCTGAA...TTCAGGAGGCCAAGGAGAAGTTAGCCAGCCTAGAGAGAGAAGCATCAGTAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS-3UTR CCA 90 bp GGAATCCATCCAAGAACCAAGTTCCCCCAGATGCCAGCCAAGGGCCAACTTTGCAAGCCAGTGGAGCACTaGGTAAATTACAGGTTTACT +
Preference number: 4 (lower is better)
Translates to: GIHPRTKFPQMPAKGQLCKPVEH*VNYRFT
Trigger: AGTAAACCTGTAATTTACCCAGTGCTCCACTGGCTT...GCAAAGTTGGCCCTTGGCTGGCATCTGGGGGAACTTGGTTCTTGGATGGATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CCA 90 bp GGGTGTCAGGCAAGTCAGCTTAAAACCTCTGCATGTCTCAGATCCTTTATCTGTGCATCTGCTGCAGCTTaGCGCATGCTTTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GCQASQLKTSACLRSFICASAAA*RMLFSW
Trigger: CCAGCTGAAAAGCATGCGCCAAGCTGCAGCAGATGC...ACAGATAAAGGATCTGAGACATGCAGAGGTTTTAAGCTGACTTGCCTGACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CCA 90 bp GGTGTCAGGCAAGTCAGCTTAAAACCTCTGCATGTCTCAGATCCTTTATCTGTACAGAGTCGAGCTCCTTaGCAACGGTTGCTAGGCCGT +
Preference number: 4 (lower is better)
Translates to: GVRQVSLKPLHVSDPLSVQSRAP*QRLLGR
Trigger: ACGGCCTAGCAACCGTTGCCAAGGAGCTCGACTCTG...TACAGATAAAGGATCTGAGACATGCAGAGGTTTTAAGCTGACTTGCCTGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR GCA 90 bp GGGTGTCAGGCAAGTCAGCTTAAAACCTCTGCATGTCTCAGATCCTTTATCTGTTTCAGGCTTTGCATCTaGTGCAGCTTGGCGCATGCT +
Preference number: 4 (lower is better)
Translates to: GCQASQLKTSACLRSFICFRLCI*CSLAHA
Trigger: AGCATGCGCCAAGCTGCAGCAGATGCAAAGCCTGAA...ACAGATAAAGGATCTGAGACATGCAGAGGTTTTAAGCTGACTTGCCTGACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGCTCCAGGGAGCGGCCTaGATCCGCTCGAATCCCAGA +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMLQGAA*IRSNPR
Trigger: TCTGGGATTCGAGCGGATCCAGGCCGCTCCCTGGAG...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242591.10
CDS-3UTR CCA 90 bp CTCCCCACCCTCCTGAATTACCTGACCAATGGAAGTTTGGCTTTGTTGTTTCAGCTTCTCTCTCTAGGCTaGCTAACTTCTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LPTLLNYLTNGSLALLFQLLSLG*LTSPWP
Trigger: AGGCCAAGGAGAAGTTAGCCAGCCTAGAGAGAGAAG...CTGAAACAACAAAGCCAAACTTCCATTGGTCAGGTAATTCAGGAGGGTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR CCA 90 bp TCTTTACTGATGCTTCTCTCTCTAGGCTGGCTAACTTCTCCTTGGCCTCCTGAACTTCTCTCTCTAGGCTaGCTAACTTCTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SLLMLLSLGWLTSPWPPELLSLG*LTSPWP
Trigger: AGGCCAAGGAGAAGTTAGCCAGCCTAGAGAGAGAAG...TTCAGGAGGCCAAGGAGAAGTTAGCCAGCCTAGAGAGAGAAGCATCAGTAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS-3UTR GCA 90 bp TATTTCTTCCAGCTTTCTGTCATGTGCAAACTATTGATGACTCTACAGCCAGACCCACTTGCGAGGTGCTaGATCAGGACCGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: YFFQLSVMCKLLMTLQPDPLARC*IRTERG
Trigger: TCCTCTCTCGGTCCTGATGCAGCACCTCGCAAGTGG...GTCTGGCTGTAGAGTCATCAATAGTTTGCACATGACAGAAAGCTGGAAGAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR GCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTGGAGAGAAACCGTGCTaGCTGGGTCCCAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPGEKPC*LGPRLA
Trigger: TGCCAGCCTGGGACCCAGGCAGCACGGTTTCTCTCC...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242591.10
CDS-3UTR GCA 90 bp CTCCCCACCCTCCTGAATTACCTGACCAATGGAAGTTTGGCTTTGTTGTTTCAGCTGCAGCTTGGCGCATaGTTTTCAGCTGGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: LPTLLNYLTNGSLALLFQLQLGA*FSAGFV
Trigger: TACAAAACCAGCTGAAAAGCATGCGCCAAGCTGCAG...CTGAAACAACAAAGCCAAACTTCCATTGGTCAGGTAATTCAGGAGGGTGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR CCA 90 bp GGAATCCATCCAAGAACCAAGTTCCCCCAGATGCCAGCCAAGGGCCAACTTTGCCTTCATACTGTTTATTaGTGTCAGCCACAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: GIHPRTKFPQMPAKGQLCLHTVY*CQPQFH
Trigger: ATGAAACTGTGGCTGACACCAATAAACAGTATGAAG...GCAAAGTTGGCCCTTGGCTGGCATCTGGGGGAACTTGGTTCTTGGATGGATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CCA 90 bp TACTTACTAGCAATGGGGTGTCAGGCAAGTCAGCTTAAAACCTCTGCATGTCTCTGGCTAACTTCTCCTTaGCCTCCTGAAGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: YLLAMGCQASQLKTSACLWLTSP*PPEVPQ
Trigger: CTGAGGAACTTCAGGAGGCCAAGGAGAAGTTAGCCA...GAGACATGCAGAGGTTTTAAGCTGACTTGCCTGACACCCCATTGCTAGTAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR TCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGGGAGGCGGGGAACAATaGAAACCAGGACGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMGGGEQ*KPGRAC
Trigger: ACACGCACGTCCTGGTTTTCATTGTTCCCCGCCTCC...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242591.10
CDS-3UTR TCA 90 bp GGGTGTCAGGCAAGTCAGCTTAAAACCTCTGCATGTCTCAGATCCTTTATCTGTAGTTCATTAGTCCTCTaGAGAAGCCAGTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: GCQASQLKTSACLRSFICSSLVL*RSQWST
Trigger: AGTGCTCCACTGGCTTCTTCAGAGGACTAATGAACT...ACAGATAAAGGATCTGAGACATGCAGAGGTTTTAAGCTGACTTGCCTGACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR TCA 90 bp TACTTACTAGCAATGGGGTGTCAGGCAAGTCAGCTTAAAACCTCTGCATGTCTCGCCACAGTTTCATCCTaGAGAAACTCACTTGGTACC +
Preference number: 4 (lower is better)
Translates to: YLLAMGCQASQLKTSACLATVSS*RNSLGT
Trigger: GGTACCAAGTGAGTTTCTTCAGGATGAAACTGTGGC...GAGACATGCAGAGGTTTTAAGCTGACTTGCCTGACACCCCATTGCTAGTAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR TCA 90 bp TACTTACTAGCAATGGGGTGTCAGGCAAGTCAGCTTAAAACCTCTGCATGTCTCCTGTTGCCTATACAGTaGGAGTTTGCCTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: YLLAMGCQASQLKTSACLLLPIQ*EFAFNG
Trigger: CCCATTGAAGGCAAACTCTCACTGTATAGGCAACAG...GAGACATGCAGAGGTTTTAAGCTGACTTGCCTGACACCCCATTGCTAGTAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR TCA 90 bp TTACGGGAAATGATAGATGCCTGTTGCCTATACAGTGAGAGTTTGCCTTCAATGTTCTCCTTGGCCTCCTaGAGTTCCTCAGCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LREMIDACCLYSESLPSMFSLAS*SSSALA
Trigger: AGCCAAAGCTGAGGAACTTCAGGAGGCCAAGGAGAA...CATTGAAGGCAAACTCTCACTGTATAGGCAACAGGCATCTATCATTTCCCGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS-3UTR TCA 90 bp AGTCAGCTTAAAACCTCTGCATGTCTCAGATCCTTTATCTGTAAAAACTGGGTAAGTGGGAGGACTGCTTaGGGCCGGGAGTTTAAGACC +
Preference number: 4 (lower is better)
Translates to: SQLKTSACLRSFICKNWVSGRTA*GREFKT
Trigger: GGTCTTAAACTCCCGGCCTCAAGCAGTCCTCCCACT...TACCCAGTTTTTACAGATAAAGGATCTGAGACATGCAGAGGTTTTAAGCTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR GCA 90 bp CTGAATTATAATTCCATCATGTGTTTCAGGTTGACTATTTCTTCCAGCTTTCTGGGAGAGAAACCGTGCTaGCTGGGTCCCAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LNYNSIMCFRLTISSSFLGEKPC*LGPRLA
Trigger: TGCCAGCCTGGGACCCAGGCAGCACGGTTTCTCTCC...CAGAAAGCTGGAAGAAATAGTCAACCTGAAACACATGATGGAATTATAATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR GCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGTTGGGAGAGAAACCGTaGTGCCTGGGTCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVLGEKP*CLGPRL
Trigger: CAGCCTGGGACCCAGGCAGCACGGTTTCTCTCCCAA...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242591.10
CDS-3UTR CCA 90 bp GGTGTCAGGCAAGTCAGCTTAAAACCTCTGCATGTCTCAGATCCTTTATCTGTACTTCTCTCTCTAGGCTaGCTAACTTCTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GVRQVSLKPLHVSDPLSVLLSLG*LTSPWP
Trigger: AGGCCAAGGAGAAGTTAGCCAGCCTAGAGAGAGAAG...TACAGATAAAGGATCTGAGACATGCAGAGGTTTTAAGCTGACTTGCCTGACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGCAGAGTCGAGCTCCTTaGCAACGGTTGCTAGGCCGT +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMQSRAP*QRLLGR
Trigger: ACGGCCTAGCAACCGTTGCCAAGGAGCTCGACTCTG...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552912.5
CDS-3UTR CCA 90 bp CTCCCCACCCTCCTGAATTACCTGACCAATGGAAGTTTGGCTTTGTTGTTTCAGCTCATGCTATATAGGTaGGCAGATCACCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LPTLLNYLTNGSLALLFQLMLYR*ADHLKS
Trigger: TGACTTCAGGTGATCTGCCCACCTATATAGCATGAG...CTGAAACAACAAAGCCAAACTTCCATTGGTCAGGTAATTCAGGAGGGTGGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR GCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGCCACTTGCGAGGTGCTaGATCAGGACCGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVPLARC*IRTERG
Trigger: TCCTCTCTCGGTCCTGATGCAGCACCTCGCAAGTGG...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242591.10
CDS-3UTR GCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGCTTCCACTTGCGAGGTaGTGCATCAGGACCGAGAGA +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMLPLAR*CIRTER
Trigger: TCTCTCGGTCCTGATGCAGCACCTCGCAAGTGGAAG...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242591.10
CDS-3UTR GCA 90 bp AGTCAGCTTAAAACCTCTGCATGTCTCAGATCCTTTATCTGTAAAAACTGGGTACTTCCACTTGCGAGGTaGTGCATCAGGACCGAGAGA +
Preference number: 4 (lower is better)
Translates to: SQLKTSACLRSFICKNWVLPLAR*CIRTER
Trigger: TCTCTCGGTCCTGATGCAGCACCTCGCAAGTGGAAG...TACCCAGTTTTTACAGATAAAGGATCTGAGACATGCAGAGGTTTTAAGCTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR GCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGACGACCCCTTCCACTTaGGAGGTGCTGCATCAGGAC +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVTTPST*EVLHQD
Trigger: GTCCTGATGCAGCACCTCGCAAGTGGAAGGGGTCGT...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242591.10
CDS-3UTR CCA 90 bp CTCCCCACCCTCCTGAATTACCTGACCAATGGAAGTTTGGCTTTGTTGTTTCAGAAGCCAGTGGAGCACTaGGTAAATTACAGGTTTACT +
Preference number: 4 (lower is better)
Translates to: LPTLLNYLTNGSLALLFQKPVEH*VNYRFT
Trigger: AGTAAACCTGTAATTTACCCAGTGCTCCACTGGCTT...CTGAAACAACAAAGCCAAACTTCCATTGGTCAGGTAATTCAGGAGGGTGGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR TCA 90 bp TACTTACTAGCAATGGGGTGTCAGGCAAGTCAGCTTAAAACCTCTGCATGTCTCCAGCCAGAACATCACTaGGAACTTGTAATAGTTGCA +
Preference number: 4 (lower is better)
Translates to: YLLAMGCQASQLKTSACLQPEHH*ELVIVA
Trigger: TGCAACTATTACAAGTTCTCAGTGATGTTCTGGCTG...GAGACATGCAGAGGTTTTAAGCTGACTTGCCTGACACCCCATTGCTAGTAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR TCA 90 bp TTACGGGAAATGATAGATGCCTGTTGCCTATACAGTGAGAGTTTGCCTTCAATGCTGTTGCCTATACAGTaGGAGTTTGCCTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: LREMIDACCLYSESLPSMLLPIQ*EFAFNG
Trigger: CCCATTGAAGGCAAACTCTCACTGTATAGGCAACAG...CATTGAAGGCAAACTCTCACTGTATAGGCAACAGGCATCTATCATTTCCCGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS-3UTR TCA 90 bp TTCTCTTTACTGATGCTTCTCTCTCTAGGCTGGCTAACTTCTCCTTGGCCTCCTTCAAATTCACGGGTCTaGTTTCTCTTTACTGATGCT +
Preference number: 4 (lower is better)
Translates to: FSLLMLLSLGWLTSPWPPSNSRV*FLFTDA
Trigger: AGCATCAGTAAAGAGAAATCAGACCCGTGAATTTGA...AGGAGGCCAAGGAGAAGTTAGCCAGCCTAGAGAGAGAAGCATCAGTAAAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS-3UTR GCA 90 bp TTACGGGAAATGATAGATGCCTGTTGCCTATACAGTGAGAGTTTGCCTTCAATGCTGCAGCTTGGCGCATaGTTTTCAGCTGGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: LREMIDACCLYSESLPSMLQLGA*FSAGFV
Trigger: TACAAAACCAGCTGAAAAGCATGCGCCAAGCTGCAG...CATTGAAGGCAAACTCTCACTGTATAGGCAACAGGCATCTATCATTTCCCGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS-3UTR GCA 90 bp CAGTACCATCAAATTCACGGGTCTGATTTCTCTTTACTGATGCTTCTCTCTCTAAGGCTTTGCATCTGCTaGAGCTTGGCGCATGCTTTT +
Preference number: 4 (lower is better)
Translates to: QYHQIHGSDFSLLMLLSLRLCIC*SLAHAF
Trigger: AAAAGCATGCGCCAAGCTGCAGCAGATGCAAAGCCT...TAGAGAGAGAAGCATCAGTAAAGAGAAATCAGACCCGTGAATTTGATGGTACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS-3UTR GCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGTTCAGGCTTTGCATCTaGTGCAGCTTGGCGCATGCT +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMFRLCI*CSLAHA
Trigger: AGCATGCGCCAAGCTGCAGCAGATGCAAAGCCTGAA...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR GCA 90 bp CTCCCCACCCTCCTGAATTACCTGACCAATGGAAGTTTGGCTTTGTTGTTTCAGATGATAGATGCCTGTTaGCTATACAGTGAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: LPTLLNYLTNGSLALLFQMIDAC*LYSESL
Trigger: CAAACTCTCACTGTATAGGCAACAGGCATCTATCAT...CTGAAACAACAAAGCCAAACTTCCATTGGTCAGGTAATTCAGGAGGGTGGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR CCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGCTTCCGACCGCGAGTTaGCGAGGTTACCTCAAATTC +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMLPTAS*RGYLKF
Trigger: GAATTTGAGGTAACCTCGCCAACTCGCGGTCGGAAG...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242591.10
CDS-3UTR CCA 90 bp TCTTTACTGATGCTTCTCTCTCTAGGCTGGCTAACTTCTCCTTGGCCTCCTGAACGCATGCTTTTCAGCTaGTTTTGTACTCTTTGCAAT +
Preference number: 4 (lower is better)
Translates to: SLLMLLSLGWLTSPWPPERMLFS*FCTLCN
Trigger: ATTGCAAAGAGTACAAAACCAGCTGAAAAGCATGCG...TTCAGGAGGCCAAGGAGAAGTTAGCCAGCCTAGAGAGAGAAGCATCAGTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS-3UTR CCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGGCATCTGCTGCAGCTTaGCGCATGCTTTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVASAAA*RMLFSW
Trigger: CCAGCTGAAAAGCATGCGCCAAGCTGCAGCAGATGC...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTGCATCTGCTGCAGCTTaGCGCATGCTTTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPASAAA*RMLFSW
Trigger: CCAGCTGAAAAGCATGCGCCAAGCTGCAGCAGATGC...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CCA 90 bp TATCAAGTAAAACCCCAAACGATGACACAAGAATTCACAGTATTAGCCGGTCCTTGGCTAACTTCTCCTTaGCCTCCTGAAGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: YQVKPQTMTQEFTVLAGPWLTSP*PPEVPQ
Trigger: CTGAGGAACTTCAGGAGGCCAAGGAGAAGTTAGCCA...AGGACCGGCTAATACTGTGAATTCTTGTGTCATCGTTTGGGGTTTTACTTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR CCA 90 bp CAGTACCATCAAATTCACGGGTCTGATTTCTCTTTACTGATGCTTCTCTCTCTATGGCTAACTTCTCCTTaGCCTCCTGAAGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: QYHQIHGSDFSLLMLLSLWLTSP*PPEVPQ
Trigger: CTGAGGAACTTCAGGAGGCCAAGGAGAAGTTAGCCA...TAGAGAGAGAAGCATCAGTAAAGAGAAATCAGACCCGTGAATTTGATGGTACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS-3UTR TCA 90 bp CTCCCCACCCTCCTGAATTACCTGACCAATGGAAGTTTGGCTTTGTTGTTTCAGCTTCTTCCATTGCACTaGTATCCTTTCTTATTTCTG +
Preference number: 4 (lower is better)
Translates to: LPTLLNYLTNGSLALLFQLLPLH*YPFLFL
Trigger: CAGAAATAAGAAAGGATATCAGTGCAATGGAAGAAG...CTGAAACAACAAAGCCAAACTTCCATTGGTCAGGTAATTCAGGAGGGTGGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR TCA 90 bp TTCTCTTTACTGATGCTTCTCTCTCTAGGCTGGCTAACTTCTCCTTGGCCTCCTCTTCTTCCATTGCACTaGTATCCTTTCTTATTTCTG +
Preference number: 4 (lower is better)
Translates to: FSLLMLLSLGWLTSPWPPLLPLH*YPFLFL
Trigger: CAGAAATAAGAAAGGATATCAGTGCAATGGAAGAAG...AGGAGGCCAAGGAGAAGTTAGCCAGCCTAGAGAGAGAAGCATCAGTAAAGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS-3UTR TCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTTTCTCCTTGGCCTCCTaGAGTTCCTCAGCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPFSLAS*SSSALA
Trigger: AGCCAAAGCTGAGGAACTTCAGGAGGCCAAGGAGAA...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR TCA 90 bp TGTACCAAAATTCCAGAAAGAAGAAAGAAAGAAAGAGAGAGAGAGAGGAAGGAATTCTCCTTGGCCTCCTaGAGTTCCTCAGCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: CTKIPERRKKERERERKEFSLAS*SSSALA
Trigger: AGCCAAAGCTGAGGAACTTCAGGAGGCCAAGGAGAA...TTCCTTCCTCTCTCTCTCTCTTTCTTTCTTTCTTCTTTCTGGAATTTTGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR TCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGTTCTCCTTGGCCTCCTaGAGTTCCTCAGCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVFSLAS*SSSALA
Trigger: AGCCAAAGCTGAGGAACTTCAGGAGGCCAAGGAGAA...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR TCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGGCCTGGCCAACATGGTaGAATCCCATCTGTACTGGA +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVAWPTW*NPICTG
Trigger: TCCAGTACAGATGGGATTTCACCATGTTGGCCAGGC...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR GCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGATTCGTTTGGCTGTCTaGTCTGGCATCTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMIRLAV*SGISSL
Trigger: CAGAGAGGAGATGCCAGAGCAGACAGCCAAACGAAT...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR GCA 90 bp TTCTCTTTACTGATGCTTCTCTCTCTAGGCTGGCTAACTTCTCCTTGGCCTCCTAACTCGAAGTTGCCTTaGTATTTTAAGCATCCATTG +
Preference number: 4 (lower is better)
Translates to: FSLLMLLSLGWLTSPWPPNSKLP*YFKHPL
Trigger: CAATGGATGCTTAAAATAGCAAGGCAACTTCGAGTT...AGGAGGCCAAGGAGAAGTTAGCCAGCCTAGAGAGAGAAGCATCAGTAAAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS-3UTR GCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGTTCAGGCTTTGCATCTaGTGCAGCTTGGCGCATGCT +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVFRLCI*CSLAHA
Trigger: AGCATGCGCCAAGCTGCAGCAGATGCAAAGCCTGAA...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR GCA 90 bp GGGTGTCAGGCAAGTCAGCTTAAAACCTCTGCATGTCTCAGATCCTTTATCTGTATGATAGATGCCTGTTaGCTATACAGTGAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: GCQASQLKTSACLRSFICMIDAC*LYSESL
Trigger: CAAACTCTCACTGTATAGGCAACAGGCATCTATCAT...ACAGATAAAGGATCTGAGACATGCAGAGGTTTTAAGCTGACTTGCCTGACACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR GCA 90 bp TTACGGGAAATGATAGATGCCTGTTGCCTATACAGTGAGAGTTTGCCTTCAATGTTTATTTTCAGGCTTTaGATCTGCTGCAGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: LREMIDACCLYSESLPSMFIFRL*ICCSLA
Trigger: CGCCAAGCTGCAGCAGATGCAAAGCCTGAAAATAAA...CATTGAAGGCAAACTCTCACTGTATAGGCAACAGGCATCTATCATTTCCCGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS-3UTR CCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGGGCTCAACATTCGTTTaGCTGTCTGCTCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMGSTFV*LSALAS
Trigger: AGATGCCAGAGCAGACAGCCAAACGAATGTTGAGCC...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CCA 90 bp CTCCCCACCCTCCTGAATTACCTGACCAATGGAAGTTTGGCTTTGTTGTTTCAGCTTCATACTGTTTATTaGTGTCAGCCACAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: LPTLLNYLTNGSLALLFQLHTVY*CQPQFH
Trigger: ATGAAACTGTGGCTGACACCAATAAACAGTATGAAG...CTGAAACAACAAAGCCAAACTTCCATTGGTCAGGTAATTCAGGAGGGTGGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR CCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGTGGCTAACTTCTCCTTaGCCTCCTGAAGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMWLTSP*PPEVPQ
Trigger: CTGAGGAACTTCAGGAGGCCAAGGAGAAGTTAGCCA...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CCA 90 bp CTCCCCACCCTCCTGAATTACCTGACCAATGGAAGTTTGGCTTTGTTGTTTCAGGAATTACCTGACCAATaGAAGTTTGGCTTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: LPTLLNYLTNGSLALLFQELPDQ*KFGFVV
Trigger: AACAACAAAGCCAAACTTCCATTGGTCAGGTAATTC...CTGAAACAACAAAGCCAAACTTCCATTGGTCAGGTAATTCAGGAGGGTGGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR TCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGAGTTCATTAGTCCTCTaGAGAAGCCAGTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMSSLVL*RSQWST
Trigger: AGTGCTCCACTGGCTTCTTCAGAGGACTAATGAACT...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR GCA 90 bp ATTAATGGCATTTTGTTTAAGCACAGTGCCCCTATCTACCAAGATGATTCTGAAATTCGTTTGGCTGTCTaGTCTGGCATCTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: INGILFKHSAPIYQDDSEIRLAV*SGISSL
Trigger: CAGAGAGGAGATGCCAGAGCAGACAGCCAAACGAAT...TTCAGAATCATCTTGGTAGATAGGGGCACTGTGCTTAAACAAAATGCCATTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR GCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATTCGTTTGGCTGTCTaGTCTGGCATCTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVIRLAV*SGISSL
Trigger: CAGAGAGGAGATGCCAGAGCAGACAGCCAAACGAAT...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR GCA 90 bp CTCCCCACCCTCCTGAATTACCTGACCAATGGAAGTTTGGCTTTGTTGTTTCAGTTTTCAACTCGAAGTTaGCTTGCTATTTTAAGCATC +
Preference number: 4 (lower is better)
Translates to: LPTLLNYLTNGSLALLFQFSTRS*LAILSI
Trigger: GATGCTTAAAATAGCAAGGCAACTTCGAGTTGAAAA...CTGAAACAACAAAGCCAAACTTCCATTGGTCAGGTAATTCAGGAGGGTGGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR GCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTAGGCTTTGCATCTGCTaGAGCTTGGCGCATGCTTTT +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPRLCIC*SLAHAF
Trigger: AAAAGCATGCGCCAAGCTGCAGCAGATGCAAAGCCT...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR GCA 90 bp ATTAATGGCATTTTGTTTAAGCACAGTGCCCCTATCTACCAAGATGATTCTGAAAGGCTTTGCATCTGCTaGAGCTTGGCGCATGCTTTT +
Preference number: 4 (lower is better)
Translates to: INGILFKHSAPIYQDDSERLCIC*SLAHAF
Trigger: AAAAGCATGCGCCAAGCTGCAGCAGATGCAAAGCCT...TTCAGAATCATCTTGGTAGATAGGGGCACTGTGCTTAAACAAAATGCCATTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR GCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGAGGCTTTGCATCTGCTaGAGCTTGGCGCATGCTTTT +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVRLCIC*SLAHAF
Trigger: AAAAGCATGCGCCAAGCTGCAGCAGATGCAAAGCCT...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR GCA 90 bp TATTATAATCCCATTAATGGCATTTTGTTTAAGCACAGTGCCCCTATCTACCAAGCCAAGGGCCAACTTTaGAAGCAGACCTTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: YYNPINGILFKHSAPIYQAKGQL*KQTFLG
Trigger: CCCTAGAAAGGTCTGCTTGCAAAGTTGGCCCTTGGC...TTGGTAGATAGGGGCACTGTGCTTAAACAAAATGCCATTAATGGGATTATAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CCA 90 bp CTGAATTATAATTCCATCATGTGTTTCAGGTTGACTATTTCTTCCAGCTTTCTGCTTCCGACCGCGAGTTaGCGAGGTTACCTCAAATTC +
Preference number: 4 (lower is better)
Translates to: LNYNSIMCFRLTISSSFLLPTAS*RGYLKF
Trigger: GAATTTGAGGTAACCTCGCCAACTCGCGGTCGGAAG...CAGAAAGCTGGAAGAAATAGTCAACCTGAAACACATGATGGAATTATAATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CCA 90 bp TTAATGGCATTTTGTTTAAGCACAGTGCCCCTATCTACCAAGATGATTCTGAATGGCTCAACATTCGTTTaGCTGTCTGCTCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: LMAFCLSTVPLSTKMILNGSTFV*LSALAS
Trigger: AGATGCCAGAGCAGACAGCCAAACGAATGTTGAGCC...ATTCAGAATCATCTTGGTAGATAGGGGCACTGTGCTTAAACAAAATGCCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTGGCTCAACATTCGTTTaGCTGTCTGCTCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPGSTFV*LSALAS
Trigger: AGATGCCAGAGCAGACAGCCAAACGAATGTTGAGCC...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGGGCTCAACATTCGTTTaGCTGTCTGCTCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVGSTFV*LSALAS
Trigger: AGATGCCAGAGCAGACAGCCAAACGAATGTTGAGCC...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CCA 90 bp TATCAAGTAAAACCCCAAACGATGACACAAGAATTCACAGTATTAGCCGGTCCTTCAAGAAGATCAGAATaGCCCATAGCTGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: YQVKPQTMTQEFTVLAGPSRRSE*PIAGSE
Trigger: TTCAGAGCCAGCTATGGGCCATTCTGATCTTCTTGA...AGGACCGGCTAATACTGTGAATTCTTGTGTCATCGTTTGGGGTTTTACTTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR CCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGTGGCTAACTTCTCCTTaGCCTCCTGAAGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVWLTSP*PPEVPQ
Trigger: CTGAGGAACTTCAGGAGGCCAAGGAGAAGTTAGCCA...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTCTTCTCTCTCTAGGCTaGCTAACTTCTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPLLSLG*LTSPWP
Trigger: AGGCCAAGGAGAAGTTAGCCAGCCTAGAGAGAGAAG...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGCTTCTCTCTCTAGGCTaGCTAACTTCTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVLLSLG*LTSPWP
Trigger: AGGCCAAGGAGAAGTTAGCCAGCCTAGAGAGAGAAG...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR TCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTAGTTCATTAGTCCTCTaGAGAAGCCAGTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPSSLVL*RSQWST
Trigger: AGTGCTCCACTGGCTTCTTCAGAGGACTAATGAACT...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR TCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGGCCACAGTTTCATCCTaGAGAAACTCACTTGGTACC +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVATVSS*RNSLGT
Trigger: GGTACCAAGTGAGTTTCTTCAGGATGAAACTGTGGC...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR TCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTCTGTTGCCTATACAGTaGGAGTTTGCCTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPLLPIQ*EFAFNG
Trigger: CCCATTGAAGGCAAACTCTCACTGTATAGGCAACAG...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR TCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGCTGTTGCCTATACAGTaGGAGTTTGCCTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVLLPIQ*EFAFNG
Trigger: CCCATTGAAGGCAAACTCTCACTGTATAGGCAACAG...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR GCA 90 bp GGTGTCAGGCAAGTCAGCTTAAAACCTCTGCATGTCTCAGATCCTTTATCTGTAAGAACTTGTAATAGTTaGATTGGCTCCAAGGAATCA +
Preference number: 4 (lower is better)
Translates to: GVRQVSLKPLHVSDPLSVRTCNS*IGSKES
Trigger: TGATTCCTTGGAGCCAATGCAACTATTACAAGTTCT...TACAGATAAAGGATCTGAGACATGCAGAGGTTTTAAGCTGACTTGCCTGACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR GCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGCTGCAGCTTGGCGCATaGTTTTCAGCTGGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVLQLGA*FSAGFV
Trigger: TACAAAACCAGCTGAAAAGCATGCGCCAAGCTGCAG...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR GCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTCTGCAGCTTGGCGCATaGTTTTCAGCTGGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPLQLGA*FSAGFV
Trigger: TACAAAACCAGCTGAAAAGCATGCGCCAAGCTGCAG...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR GCA 90 bp GGTGTCAGGCAAGTCAGCTTAAAACCTCTGCATGTCTCAGATCCTTTATCTGTACAGCTTTCTGTCATGTaGAAACTATTGATGACTCTA +
Preference number: 4 (lower is better)
Translates to: GVRQVSLKPLHVSDPLSVQLSVM*KLLMTL
Trigger: TAGAGTCATCAATAGTTTGCACATGACAGAAAGCTG...TACAGATAAAGGATCTGAGACATGCAGAGGTTTTAAGCTGACTTGCCTGACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGATCCACAAGTTGCTTTaGGTCAATCTCAGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMIHKLL*VNLSQN
Trigger: GTTCTGGCTGAGATTGACCCAAAGCAACTTGTGGAT...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGTCAAGAAGATCAGAATaGCCCATAGCTGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMSRRSE*PIAGSE
Trigger: TTCAGAGCCAGCTATGGGCCATTCTGATCTTCTTGA...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR TCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGGTAGCACGACGAAGTTaGACTTCTAGGTTCTTAATC +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMVARRS*TSRFLI
Trigger: GATTAAGAACCTAGAAGTTCAACTTCGTCGTGCTAC...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR TCA 90 bp ATTAATGGCATTTTGTTTAAGCACAGTGCCCCTATCTACCAAGATGATTCTGAAAGCCATTCTTATCAGTaGATGGCAGGAATCCATCCA +
Preference number: 4 (lower is better)
Translates to: INGILFKHSAPIYQDDSESHSYQ*MAGIHP
Trigger: TGGATGGATTCCTGCCATTCACTGATAAGAATGGCT...TTCAGAATCATCTTGGTAGATAGGGGCACTGTGCTTAAACAAAATGCCATTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR GCA 90 bp AAAGCTGCGTTAGTAACAGATGATGTGTTGAATTGGCAAACAAAACTTGAATTCCTGCAGCTTGGCGCATaGTTTTCAGCTGGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: KAALVTDDVLNWQTKLEFLQLGA*FSAGFV
Trigger: TACAAAACCAGCTGAAAAGCATGCGCCAAGCTGCAG...GAATTCAAGTTTTGTTTGCCAATTCAACACATCATCTGTTACTAACGCAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR GCA 90 bp CAGTACCATCAAATTCACGGGTCTGATTTCTCTTTACTGATGCTTCTCTCTCTAATGATAGATGCCTGTTaGCTATACAGTGAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: QYHQIHGSDFSLLMLLSLMIDAC*LYSESL
Trigger: CAAACTCTCACTGTATAGGCAACAGGCATCTATCAT...TAGAGAGAGAAGCATCAGTAAAGAGAAATCAGACCCGTGAATTTGATGGTACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS-3UTR GCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGAGTTCTTCAGTCCTCTaGAAAAGACCGAATTCAGCT +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMSSSVL*KRPNSA
Trigger: AGCTGAATTCGGTCTTTTGCAGAGGACTGAAGAACT...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR GCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTGGAAAACAGGACTCATaGTATATAGGTGGGCAGATC +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPGKQDS*YIGGQI
Trigger: GATCTGCCCACCTATATAGCATGAGTCCTGTTTTCC...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR CCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATCCACAAGTTGCTTTaGGTCAATCTCAGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVIHKLL*VNLSQN
Trigger: GTTCTGGCTGAGATTGACCCAAAGCAACTTGTGGAT...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGAAGCCAGTGGAGCACTaGGTAAATTACAGGTTTACT +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMKPVEH*VNYRFT
Trigger: AGTAAACCTGTAATTTACCCAGTGCTCCACTGGCTT...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CCA 90 bp TGCCTAGCCTGTACCAAAATTCCAGAAAGAAGAAAGAAAGAAAGAGAGAGAGAGCGCATGCTTTTCAGCTaGTTTTGTACTCTTTGCAAT +
Preference number: 4 (lower is better)
Translates to: CLACTKIPERRKKERERERMLFS*FCTLCN
Trigger: ATTGCAAAGAGTACAAAACCAGCTGAAAAGCATGCG...CTCTCTCTCTCTTTCTTTCTTTCTTCTTTCTGGAATTTTGGTACAGGCTAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CCA 90 bp TATCAAGTAAAACCCCAAACGATGACACAAGAATTCACAGTATTAGCCGGTCCTCGCATGCTTTTCAGCTaGTTTTGTACTCTTTGCAAT +
Preference number: 4 (lower is better)
Translates to: YQVKPQTMTQEFTVLAGPRMLFS*FCTLCN
Trigger: ATTGCAAAGAGTACAAAACCAGCTGAAAAGCATGCG...AGGACCGGCTAATACTGTGAATTCTTGTGTCATCGTTTGGGGTTTTACTTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR CCA 90 bp TGTACCAAAATTCCAGAAAGAAGAAAGAAAGAAAGAGAGAGAGAGAGGAAGGAATCAAGAAGATCAGAATaGCCCATAGCTGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: CTKIPERRKKERERERKESRRSE*PIAGSE
Trigger: TTCAGAGCCAGCTATGGGCCATTCTGATCTTCTTGA...TTCCTTCCTCTCTCTCTCTCTTTCTTTCTTTCTTCTTTCTGGAATTTTGGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR TCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTCAGCCAGAACATCACTaGGAACTTGTAATAGTTGCA +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPQPEHH*ELVIVA
Trigger: TGCAACTATTACAAGTTCTCAGTGATGTTCTGGCTG...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR TCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGCAGCCAGAACATCACTaGGAACTTGTAATAGTTGCA +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVQPEHH*ELVIVA
Trigger: TGCAACTATTACAAGTTCTCAGTGATGTTCTGGCTG...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR TCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGCCAATCACCAAACCCTaGCGAAAAGTACTCATATCT +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVPITKP*RKVLIS
Trigger: AGATATGAGTACTTTTCGTCAGGGTTTGGTGATTGG...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR TCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTCCAATCACCAAACCCTaGCGAAAAGTACTCATATCT +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPPITKP*RKVLIS
Trigger: AGATATGAGTACTTTTCGTCAGGGTTTGGTGATTGG...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR TCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGTCAAATTCACGGGTCTaGTTTCTCTTTACTGATGCT +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMSNSRV*FLFTDA
Trigger: AGCATCAGTAAAGAGAAATCAGACCCGTGAATTTGA...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR TCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTGTAGCACGACGAAGTTaGACTTCTAGGTTCTTAATC +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPVARRS*TSRFLI
Trigger: GATTAAGAACCTAGAAGTTCAACTTCGTCGTGCTAC...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR TCA 90 bp ATAATCCCATTAATGGCATTTTGTTTAAGCACAGTGCCCCTATCTACCAAGATGTCATGTGTTTCAGGTTaGCTATTTCTTCCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: IIPLMAFCLSTVPLSTKMSCVSG*LFLPAF
Trigger: GAAAGCTGGAAGAAATAGTCAACCTGAAACACATGA...CATCTTGGTAGATAGGGGCACTGTGCTTAAACAAAATGCCATTAATGGGATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR GCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGAGTTCTTCAGTCCTCTaGAAAAGACCGAATTCAGCT +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVSSSVL*KRPNSA
Trigger: AGCTGAATTCGGTCTTTTGCAGAGGACTGAAGAACT...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR GCA 90 bp TATCAAGTAAAACCCCAAACGATGACACAAGAATTCACAGTATTAGCCGGTCCTATCAGAAGAGATATATaGCTTCATCTCATCAGTAGC +
Preference number: 4 (lower is better)
Translates to: YQVKPQTMTQEFTVLAGPIRRDI*LHLISS
Trigger: GCTACTGATGAGATGAAGGCATATATCTCTTCTGAT...AGGACCGGCTAATACTGTGAATTCTTGTGTCATCGTTTGGGGTTTTACTTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR CCA 90 bp TATTATAATCCCATTAATGGCATTTTGTTTAAGCACAGTGCCCCTATCTACCAAATCCACAAGTTGCTTTaGGTCAATCTCAGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: YYNPINGILFKHSAPIYQIHKLL*VNLSQN
Trigger: GTTCTGGCTGAGATTGACCCAAAGCAACTTGTGGAT...TTGGTAGATAGGGGCACTGTGCTTAAACAAAATGCCATTAATGGGATTATAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGCGCATGCTTTTCAGCTaGTTTTGTACTCTTTGCAAT +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMRMLFS*FCTLCN
Trigger: ATTGCAAAGAGTACAAAACCAGCTGAAAAGCATGCG...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTGCTTGGAGTTTCAAGTaGAAAACAGGACTCATGCTA +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPAWSFK*KTGLML
Trigger: TAGCATGAGTCCTGTTTTCCACTTGAAACTCCAAGC...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR TCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGATCTGTGGCATTTCCTaGAGGTTTGTACTTAAGAAT +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMICGIS*RFVLKN
Trigger: ATTCTTAAGTACAAACCTTCAGGAAATGCCACAGAT...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR TCA 90 bp TATTATAATCCCATTAATGGCATTTTGTTTAAGCACAGTGCCCCTATCTACCAACCAATCACCAAACCCTaGCGAAAAGTACTCATATCT +
Preference number: 4 (lower is better)
Translates to: YYNPINGILFKHSAPIYQPITKP*RKVLIS
Trigger: AGATATGAGTACTTTTCGTCAGGGTTTGGTGATTGG...TTGGTAGATAGGGGCACTGTGCTTAAACAAAATGCCATTAATGGGATTATAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR TCA 90 bp TGTACCAAAATTCCAGAAAGAAGAAAGAAAGAAAGAGAGAGAGAGAGGAAGGAATCAAATTCACGGGTCTaGTTTCTCTTTACTGATGCT +
Preference number: 4 (lower is better)
Translates to: CTKIPERRKKERERERKESNSRV*FLFTDA
Trigger: AGCATCAGTAAAGAGAAATCAGACCCGTGAATTTGA...TTCCTTCCTCTCTCTCTCTCTTTCTTTCTTTCTTCTTTCTGGAATTTTGGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR TCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTTCAAATTCACGGGTCTaGTTTCTCTTTACTGATGCT +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPSNSRV*FLFTDA
Trigger: AGCATCAGTAAAGAGAAATCAGACCCGTGAATTTGA...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR TCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGAACTGTAGGAACTGCTaGACGTCAGATAAATGTTTC +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVNCRNC*TSDKCF
Trigger: GAAACATTTATCTGACGTTCAGCAGTTCCTACAGTT...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR TCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTAACTGTAGGAACTGCTaGACGTCAGATAAATGTTTC +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPNCRNC*TSDKCF
Trigger: GAAACATTTATCTGACGTTCAGCAGTTCCTACAGTT...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR GCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGAACTCGAAGTTGCCTTaGTATTTTAAGCATCCATTG +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMNSKLP*YFKHPL
Trigger: CAATGGATGCTTAAAATAGCAAGGCAACTTCGAGTT...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR GCA 90 bp AGTCAGCTTAAAACCTCTGCATGTCTCAGATCCTTTATCTGTAAAAACTGGGTAAACTCGAAGTTGCCTTaGTATTTTAAGCATCCATTG +
Preference number: 4 (lower is better)
Translates to: SQLKTSACLRSFICKNWVNSKLP*YFKHPL
Trigger: CAATGGATGCTTAAAATAGCAAGGCAACTTCGAGTT...TACCCAGTTTTTACAGATAAAGGATCTGAGACATGCAGAGGTTTTAAGCTGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR GCA 90 bp CAGTACCATCAAATTCACGGGTCTGATTTCTCTTTACTGATGCTTCTCTCTCTATTTTCAACTCGAAGTTaGCTTGCTATTTTAAGCATC +
Preference number: 4 (lower is better)
Translates to: QYHQIHGSDFSLLMLLSLFSTRS*LAILSI
Trigger: GATGCTTAAAATAGCAAGGCAACTTCGAGTTGAAAA...TAGAGAGAGAAGCATCAGTAAAGAGAAATCAGACCCGTGAATTTGATGGTACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS-3UTR GCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGATAGATGCCTGTTaGCTATACAGTGAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVMIDAC*LYSESL
Trigger: CAAACTCTCACTGTATAGGCAACAGGCATCTATCAT...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR GCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTATGATAGATGCCTGTTaGCTATACAGTGAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPMIDAC*LYSESL
Trigger: CAAACTCTCACTGTATAGGCAACAGGCATCTATCAT...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGCTTCATACTGTTTATTaGTGTCAGCCACAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMLHTVY*CQPQFH
Trigger: ATGAAACTGTGGCTGACACCAATAAACAGTATGAAG...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTCGCATGCTTTTCAGCTaGTTTTGTACTCTTTGCAAT +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPRMLFS*FCTLCN
Trigger: ATTGCAAAGAGTACAAAACCAGCTGAAAAGCATGCG...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGGAATTACCTGACCAATaGAAGTTTGGCTTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMELPDQ*KFGFVV
Trigger: AACAACAAAGCCAAACTTCCATTGGTCAGGTAATTC...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CCA 90 bp ATAATCCCATTAATGGCATTTTGTTTAAGCACAGTGCCCCTATCTACCAAGATGATTCTTATCAGTGAATaGCAGGAATCCATCCAAGAA +
Preference number: 4 (lower is better)
Translates to: IIPLMAFCLSTVPLSTKMILISE*QESIQE
Trigger: TTCTTGGATGGATTCCTGCCATTCACTGATAAGAAT...CATCTTGGTAGATAGGGGCACTGTGCTTAAACAAAATGCCATTAATGGGATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGTATGTCAGGTATGCTTaGAGTTTCAAGTGGAAAACA +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMYVRYA*SFKWKT
Trigger: TGTTTTCCACTTGAAACTCCAAGCATACCTGACATA...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR TCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTATCTGTGGCATTTCCTaGAGGTTTGTACTTAAGAAT +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPICGIS*RFVLKN
Trigger: ATTCTTAAGTACAAACCTTCAGGAAATGCCACAGAT...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR TCA 90 bp ATTAATGGCATTTTGTTTAAGCACAGTGCCCCTATCTACCAAGATGATTCTGAAATCTGTGGCATTTCCTaGAGGTTTGTACTTAAGAAT +
Preference number: 4 (lower is better)
Translates to: INGILFKHSAPIYQDDSEICGIS*RFVLKN
Trigger: ATTCTTAAGTACAAACCTTCAGGAAATGCCACAGAT...TTCAGAATCATCTTGGTAGATAGGGGCACTGTGCTTAAACAAAATGCCATTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR TCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGCTTCTTCCATTGCACTaGTATCCTTTCTTATTTCTG +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVLLPLH*YPFLFL
Trigger: CAGAAATAAGAAAGGATATCAGTGCAATGGAAGAAG...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR TCA 90 bp ATTAATGGCATTTTGTTTAAGCACAGTGCCCCTATCTACCAAGATGATTCTGAACTTCTTCCATTGCACTaGTATCCTTTCTTATTTCTG +
Preference number: 4 (lower is better)
Translates to: INGILFKHSAPIYQDDSELLPLH*YPFLFL
Trigger: CAGAAATAAGAAAGGATATCAGTGCAATGGAAGAAG...TTCAGAATCATCTTGGTAGATAGGGGCACTGTGCTTAAACAAAATGCCATTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR TCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTCTTCTTCCATTGCACTaGTATCCTTTCTTATTTCTG +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPLLPLH*YPFLFL
Trigger: CAGAAATAAGAAAGGATATCAGTGCAATGGAAGAAG...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR TCA 90 bp TATTATAATCCCATTAATGGCATTTTGTTTAAGCACAGTGCCCCTATCTACCAATGCGTTAGTAACAGATaGTGTGTTGAATTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: YYNPINGILFKHSAPIYQCVSNR*CVELAN
Trigger: GTTTGCCAATTCAACACATCATCTGTTACTAACGCA...TTGGTAGATAGGGGCACTGTGCTTAAACAAAATGCCATTAATGGGATTATAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR GCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGAGAACTTGTAATAGTTaGATTGGCTCCAAGGAATCA +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVRTCNS*IGSKES
Trigger: TGATTCCTTGGAGCCAATGCAACTATTACAAGTTCT...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000552912.5
CDS-3UTR GCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGAACTCGAAGTTGCCTTaGTATTTTAAGCATCCATTG +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVNSKLP*YFKHPL
Trigger: CAATGGATGCTTAAAATAGCAAGGCAACTTCGAGTT...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR GCA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGTTTTCAACTCGAAGTTaGCTTGCTATTTTAAGCATC +
Preference number: 4 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMFSTRS*LAILSI
Trigger: GATGCTTAAAATAGCAAGGCAACTTCGAGTTGAAAA...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR GCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATCAGAAGAGATATATaGCTTCATCTCATCAGTAGC +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVIRRDI*LHLISS
Trigger: GCTACTGATGAGATGAAGGCATATATCTCTTCTGAT...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR GCA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTGTTATATGTCAGGTATaGTTGGAGTTTCAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: GTAERQINVSSEQEILVPVICQV*LEFQVE
Trigger: TTCCACTTGAAACTCCAAGCATACCTGACATATAAC...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR CCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGCTTCATACTGTTTATTaGTGTCAGCCACAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVLHTVY*CQPQFH
Trigger: ATGAAACTGTGGCTGACACCAATAAACAGTATGAAG...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGGAATTACCTGACCAATaGAAGTTTGGCTTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVELPDQ*KFGFVV
Trigger: AACAACAAAGCCAAACTTCCATTGGTCAGGTAATTC...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR GCA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGTTTTCAACTCGAAGTTaGCTTGCTATTTTAAGCATC +
Preference number: 4 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVFSTRS*LAILSI
Trigger: GATGCTTAAAATAGCAAGGCAACTTCGAGTTGAAAA...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR GCA 90 bp TGTACCAAAATTCCAGAAAGAAGAAAGAAAGAAAGAGAGAGAGAGAGGAAGGAATTTTCAACTCGAAGTTaGCTTGCTATTTTAAGCATC +
Preference number: 4 (lower is better)
Translates to: CTKIPERRKKERERERKEFSTRS*LAILSI
Trigger: GATGCTTAAAATAGCAAGGCAACTTCGAGTTGAAAA...TTCCTTCCTCTCTCTCTCTCTTTCTTTCTTTCTTCTTTCTGGAATTTTGGTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361948.8
3UTR CAA 72 bp ATGATTCTGAATTATAATTCCATCATGTGTTTCAGGTaGACTATTTCTTCCAGCTTTCTGTCATGTGCAAAC +
Preference number: 4 (lower is better)
Translates to: MILNYNSIMCFR*TISSSFLSCAN
Trigger: GTTTGCACATGACAGAAAGCTGGAAGAAATAGTCAACCTGAAACACATGATGGAATTATAATTCAGAATCAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS GCA 90 bp CAGGACGTGCGTGTTCTCTGGCACAATTTGGGAGAGAAACCGTGCTaGCTGGGTCCCAGGCTGGCACGAGCATCGACCCGCAGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: QDVRVLWHNLGEKPC*LGPRLARASTRSLL
Trigger: CAGGAGGCTGCGGGTCGATGCTCGTGCCAGCCTGGGACCCAGGCAGCACGGTTTCTCTCCCAAATTGTGCCAGAGAACACGCACGTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS CCA 90 bp ACGTGCGTGTTCTCTGGCACAATTTGGGAGAGAAACCGTGCTGCCTaGGTCCCAGGCTGGCACGAGCATCGACCCGCAGCCTCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: TCVFSGTIWERNRAA*VPGWHEHRPAASWE
Trigger: CTCCCAGGAGGCTGCGGGTCGATGCTCGTGCCAGCCTGGGACCCAGGCAGCACGGTTTCTCTCCCAAATTGTGCCAGAGAACACGCACGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS GCA 90 bp AACCAGGACGTGCGTGTTCTCTGGCACAATTTGGGAGAGAAACCGTaGTGCCTGGGTCCCAGGCTGGCACGAGCATCGACCCGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: NQDVRVLWHNLGEKP*CLGPRLARASTRSL
Trigger: GAGGCTGCGGGTCGATGCTCGTGCCAGCCTGGGACCCAGGCAGCACGGTTTCTCTCCCAAATTGTGCCAGAGAACACGCACGTCCTGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS CCA 90 bp TCGCAGGAGGCGGGGAACAATGAAAACCAGGACGTGCGTGTTCTCTaGCACAATTTGGGAGAGAAACCGTGCTGCCTGGGTCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SQEAGNNENQDVRVL*HNLGEKPCCLGPRL
Trigger: CAGCCTGGGACCCAGGCAGCACGGTTTCTCTCCCAAATTGTGCCAGAGAACACGCACGTCCTGGTTTTCATTGTTCCCCGCCTCCTGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS GCA 90 bp CCACAAACGAGTCGCAGGAGGCGGGGAACAATGAAAACCAGGACGTaGGTGTTCTCTGGCACAATTTGGGAGAGAAACCGTGCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: PQTSRRRRGTMKTRT*VFSGTIWERNRAAW
Trigger: CCAGGCAGCACGGTTTCTCTCCCAAATTGTGCCAGAGAACACGCACGTCCTGGTTTTCATTGTTCCCCGCCTCCTGCGACTCGTTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS CCA 90 bp AGCTCTCTCCTATTTCGGGGTTCAGAGGAGCTTCCGACCGCGAGTTaGCGAGGTTACCTCAAATTCTCCTCACGAAACCGTTTCCCCACC +
Preference number: 5 (lower is better)
Translates to: SSLLFRGSEELPTAS*RGYLKFSSRNRFPT
Trigger: GGTGGGGAAACGGTTTCGTGAGGAGAATTTGAGGTAACCTCGCCAACTCGCGGTCGGAAGCTCCTCTGAACCCCGAAATAGGAGAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS-3UTR CAA 90 bp AAGTTCCCCCAGATGCCAGCCAAGGGCCAACTTTGCAAGCAGACCTTTCTAGGGTGCATCTGCTGCAGCTaGGCGCATGCTTTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: KFPQMPAKGQLCKQTFLGCICCS*AHAFQL
Trigger: CAGCTGAAAAGCATGCGCCAAGCTGCAGCAGATGCA...CCCTAGAAAGGTCTGCTTGCAAAGTTGGCCCTTGGCTGGCATCTGGGGGAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CAA 90 bp CTCCCCACCCTCCTGAATTACCTGACCAATGGAAGTTTGGCTTTGTTGTTTCAGTGCATCTGCTGCAGCTaGGCGCATGCTTTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: LPTLLNYLTNGSLALLFQCICCS*AHAFQL
Trigger: CAGCTGAAAAGCATGCGCCAAGCTGCAGCAGATGCA...CTGAAACAACAAAGCCAAACTTCCATTGGTCAGGTAATTCAGGAGGGTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR CAA 90 bp AAGTTCCCCCAGATGCCAGCCAAGGGCCAACTTTGCAAGCAGACCTTTCTAGGGCTGGTTTTGTACTCTTaGCAATCTTTGCACTGCATG +
Preference number: 5 (lower is better)
Translates to: KFPQMPAKGQLCKQTFLGLVLYS*QSLHCM
Trigger: CATGCAGTGCAAAGATTGCAAAGAGTACAAAACCAG...CCCTAGAAAGGTCTGCTTGCAAAGTTGGCCCTTGGCTGGCATCTGGGGGAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS CCA 90 bp GCCTGTTTAAAGCTCAGGAAGAAGGTCAGAGTGGCTGAAGCTCCATaGATGAGGAGTAGAGCACATGGACATGAAGTTCATAAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: ACLKLRKKVRVAEAP*MRSRAHGHEVHKAG
Trigger: ACCTGCCTTATGAACTTCATGTCCATGTGCTCTACTCCTCATCCATGGAGCTTCAGCCACTCTGACCTTCTTCCTGAGCTTTAAACAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550748.1
CDS-3UTR CAA 90 bp GGAATCCATCCAAGAACCAAGTTCCCCCAGATGCCAGCCAAGGGCCAACTTTGCTCTTCATACTGTTTATaGGTGTCAGCCACAGTTTCA +
Preference number: 5 (lower is better)
Translates to: GIHPRTKFPQMPAKGQLCSSYCL*VSATVS
Trigger: TGAAACTGTGGCTGACACCAATAAACAGTATGAAGA...GCAAAGTTGGCCCTTGGCTGGCATCTGGGGGAACTTGGTTCTTGGATGGATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CAA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTCCAGAGTCGAGCTCCTaGGCAACGGTTGCTAGGCCG +
Preference number: 5 (lower is better)
Translates to: GTAERQINVSSEQEILVPPESSS*ATVARP
Trigger: CGGCCTAGCAACCGTTGCCAAGGAGCTCGACTCTGG...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552912.5
CDS TCA 90 bp TCTTATAATTTTAACCACAAACGAGTCGCAGGAGGCGGGGAACAATaGAAACCAGGACGTGCGTGTTCTCTGGCACAATTTGGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: SYNFNHKRVAGGGEQ*KPGRACSLAQFGRE
Trigger: TTCTCTCCCAAATTGTGCCAGAGAACACGCACGTCCTGGTTTTCATTGTTCCCCGCCTCCTGCGACTCGTTTGTGGTTAAAATTATAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS-3UTR CAA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGGACGACCCCTTCCACTaGCGAGGTGCTGCATCAGGA +
Preference number: 5 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVDDPFH*RGAASG
Trigger: TCCTGATGCAGCACCTCGCAAGTGGAAGGGGTCGTC...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242591.10
CDS-3UTR CAA 90 bp TGTACCAAAATTCCAGAAAGAAGAAAGAAAGAAAGAGAGAGAGAGAGGAAGGAAGACGACCCCTTCCACTaGCGAGGTGCTGCATCAGGA +
Preference number: 5 (lower is better)
Translates to: CTKIPERRKKERERERKEDDPFH*RGAASG
Trigger: TCCTGATGCAGCACCTCGCAAGTGGAAGGGGTCGTC...TTCCTTCCTCTCTCTCTCTCTTTCTTTCTTTCTTCTTTCTGGAATTTTGGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CAA 90 bp CAGTACCATCAAATTCACGGGTCTGATTTCTCTTTACTGATGCTTCTCTCTCTATGCATCTGCTGCAGCTaGGCGCATGCTTTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: QYHQIHGSDFSLLMLLSLCICCS*AHAFQL
Trigger: CAGCTGAAAAGCATGCGCCAAGCTGCAGCAGATGCA...TAGAGAGAGAAGCATCAGTAAAGAGAAATCAGACCCGTGAATTTGATGGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS-3UTR CAA 90 bp AAAGCTGCGTTAGTAACAGATGATGTGTTGAATTGGCAAACAAAACTTGAATTCCCAGAGTCGAGCTCCTaGGCAACGGTTGCTAGGCCG +
Preference number: 5 (lower is better)
Translates to: KAALVTDDVLNWQTKLEFPESSS*ATVARP
Trigger: CGGCCTAGCAACCGTTGCCAAGGAGCTCGACTCTGG...GAATTCAAGTTTTGTTTGCCAATTCAACACATCATCTGTTACTAACGCAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CAA 90 bp TTCTCTTTACTGATGCTTCTCTCTCTAGGCTGGCTAACTTCTCCTTGGCCTCCTATTTATTTTCAGGCTTaGCATCTGCTGCAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: FSLLMLLSLGWLTSPWPPIYFQA*HLLQLG
Trigger: GCCAAGCTGCAGCAGATGCAAAGCCTGAAAATAAAT...AGGAGGCCAAGGAGAAGTTAGCCAGCCTAGAGAGAGAAGCATCAGTAAAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS CCA 90 bp CTTAAGAATACCAAGAAGGCTCAACATTCGTTTGGCTGTCTGCTCTaGCATCTCCTCTCTGATATCCACAAGTTGCTTTGGGTCAATCTC +
Preference number: 5 (lower is better)
Translates to: LKNTKKAQHSFGCLL*HLLSDIHKLLWVNL
Trigger: GAGATTGACCCAAAGCAACTTGTGGATATCAGAGAGGAGATGCCAGAGCAGACAGCCAAACGAATGTTGAGCCTTCTTGGTATTCTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000242591.10
ENST00000361948.8
ENST00000546374.5
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp TTCTCTTTACTGATGCTTCTCTCTCTAGGCTGGCTAACTTCTCCTTGGCCTCCTCTGGTTTTGTACTCTTaGCAATCTTTGCACTGCATG +
Preference number: 5 (lower is better)
Translates to: FSLLMLLSLGWLTSPWPPLVLYS*QSLHCM
Trigger: CATGCAGTGCAAAGATTGCAAAGAGTACAAAACCAG...AGGAGGCCAAGGAGAAGTTAGCCAGCCTAGAGAGAGAAGCATCAGTAAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS-3UTR CAA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGTGCATCTGCTGCAGCTaGGCGCATGCTTTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMCICCS*AHAFQL
Trigger: CAGCTGAAAAGCATGCGCCAAGCTGCAGCAGATGCA...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS GCA 90 bp TTGTACTTAAGAATACCAAGAAGGCTCAACATTCGTTTGGCTGTCTaGTCTGGCATCTCCTCTCTGATATCCACAAGTTGCTTTGGGTCA +
Preference number: 5 (lower is better)
Translates to: LYLRIPRRLNIRLAV*SGISSLISTSCFGS
Trigger: TGACCCAAAGCAACTTGTGGATATCAGAGAGGAGATGCCAGAGCAGACAGCCAAACGAATGTTGAGCCTTCTTGGTATTCTTAAGTACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000242591.10
ENST00000361948.8
ENST00000546374.5
ENST00000550156.5
ENST00000552912.5
CDS CCA 90 bp TCTAGCCTCTTCATTAAACTTTCAGGCTTTGCATCTGCTGCAGCTTaGCGCATGCTTTTCAGCTGGTTTTGTACTCTTTGCAATCTTTGC +
Preference number: 5 (lower is better)
Translates to: SSLFIKLSGFASAAA*RMLFSWFCTLCNLC
Trigger: GCAAAGATTGCAAAGAGTACAAAACCAGCTGAAAAGCATGCGCCAAGCTGCAGCAGATGCAAAGCCTGAAAGTTTAATGAAGAGGCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000242591.10
ENST00000361948.8
ENST00000546374.5
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTGCTTCCGACCGCGAGTaGGCGAGGTTACCTCAAATT +
Preference number: 5 (lower is better)
Translates to: GTAERQINVSSEQEILVPASDRE*ARLPQI
Trigger: AATTTGAGGTAACCTCGCCAACTCGCGGTCGGAAGC...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242591.10
CDS-3UTR CAA 90 bp TGTACCAAAATTCCAGAAAGAAGAAAGAAAGAAAGAGAGAGAGAGAGGAAGGAAGCTTCCGACCGCGAGTaGGCGAGGTTACCTCAAATT +
Preference number: 5 (lower is better)
Translates to: CTKIPERRKKERERERKEASDRE*ARLPQI
Trigger: AATTTGAGGTAACCTCGCCAACTCGCGGTCGGAAGC...TTCCTTCCTCTCTCTCTCTCTTTCTTTCTTTCTTCTTTCTGGAATTTTGGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CAA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGAGGCTCAACATTCGTTaGGCTGTCTGCTCTGGCATC +
Preference number: 5 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMRLNIR*AVCSGI
Trigger: GATGCCAGAGCAGACAGCCAAACGAATGTTGAGCCT...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp TCTTTACTGATGCTTCTCTCTCTAGGCTGGCTAACTTCTCCTTGGCCTCCTGAAGCTTTTCAGCTGGTTTaGTACTCTTTGCAATCTTTG +
Preference number: 5 (lower is better)
Translates to: SLLMLLSLGWLTSPWPPEAFQLV*YSLQSL
Trigger: CAAAGATTGCAAAGAGTACAAAACCAGCTGAAAAGC...TTCAGGAGGCCAAGGAGAAGTTAGCCAGCCTAGAGAGAGAAGCATCAGTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS-3UTR CAA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGTGCATCTGCTGCAGCTaGGCGCATGCTTTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVCICCS*AHAFQL
Trigger: CAGCTGAAAAGCATGCGCCAAGCTGCAGCAGATGCA...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS GCA 90 bp TCTTCATTAAACTTTCAGGCTTTGCATCTGCTGCAGCTTGGCGCATaGTTTTCAGCTGGTTTTGTACTCTTTGCAATCTTTGCACTGCAT +
Preference number: 5 (lower is better)
Translates to: SSLNFQALHLLQLGA*FSAGFVLFAIFALH
Trigger: ATGCAGTGCAAAGATTGCAAAGAGTACAAAACCAGCTGAAAAGCATGCGCCAAGCTGCAGCAGATGCAAAGCCTGAAAGTTTAATGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000242591.10
ENST00000361948.8
ENST00000546374.5
ENST00000550156.5
ENST00000552912.5
CDS GCA 90 bp AGTTTACTGTGGGAGGCCAGGCAGCAGATAATGAGCCTTGTACTTTaGTGGGAGTGGTACAGATGGGAAATTAAGTGTGTACAAATTAAA +
Preference number: 5 (lower is better)
Translates to: SLLWEARQQIMSLVL*WEWYRWEIKCVQIK
Trigger: TTTAATTTGTACACACTTAATTTCCCATCTGTACCACTCCCAGCAAAGTACAAGGCTCATTATCTGCTGCCTGGCCTCCCACAGTAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550748.1
CDS CCA 90 bp TTACTGTGGGAGGCCAGGCAGCAGATAATGAGCCTTGTACTTTGCTaGGAGTGGTACAGATGGGAAATTAAGTGTGTACAAATTAAAGAA +
Preference number: 5 (lower is better)
Translates to: LLWEARQQIMSLVLC*EWYRWEIKCVQIKE
Trigger: TTCTTTAATTTGTACACACTTAATTTCCCATCTGTACCACTCCCAGCAAAGTACAAGGCTCATTATCTGCTGCCTGGCCTCCCACAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550748.1
CDS-3UTR CAA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTGTTCTCTGGCACAATTaGGGAGAGAAACCGTGCTGC +
Preference number: 5 (lower is better)
Translates to: GTAERQINVSSEQEILVPVLWHN*GEKPCC
Trigger: GCAGCACGGTTTCTCTCCCAAATTGTGCCAGAGAAC...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242591.10
CDS-3UTR CAA 90 bp TGTACCAAAATTCCAGAAAGAAGAAAGAAAGAAAGAGAGAGAGAGAGGAAGGAAAGGCTCAACATTCGTTaGGCTGTCTGCTCTGGCATC +
Preference number: 5 (lower is better)
Translates to: CTKIPERRKKERERERKERLNIR*AVCSGI
Trigger: GATGCCAGAGCAGACAGCCAAACGAATGTTGAGCCT...TTCCTTCCTCTCTCTCTCTCTTTCTTTCTTTCTTCTTTCTGGAATTTTGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CAA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGAGGCTCAACATTCGTTaGGCTGTCTGCTCTGGCATC +
Preference number: 5 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVRLNIR*AVCSGI
Trigger: GATGCCAGAGCAGACAGCCAAACGAATGTTGAGCCT...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp TTCTCTTTACTGATGCTTCTCTCTCTAGGCTGGCTAACTTCTCCTTGGCCTCCTTTGTTCCTGTTTCTGTaGTGCAAGATATTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: FSLLMLLSLGWLTSPWPPLFLFL*CKIFFS
Trigger: AGAGAAGAATATCTTGCACAACAGAAACAGGAACAA...AGGAGGCCAAGGAGAAGTTAGCCAGCCTAGAGAGAGAAGCATCAGTAAAGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS TCA 90 bp CTCTCATCTCCCTTTAAAACTTCAGTACCATCAAATTCACGGGTCTaGTTTCTCTTTACTGATGCTTCTCTCTCTAGGCTGGCTAACTTC +
Preference number: 5 (lower is better)
Translates to: LSSPFKTSVPSNSRV*FLFTDASLSRLANF
Trigger: GAAGTTAGCCAGCCTAGAGAGAGAAGCATCAGTAAAGAGAAATCAGACCCGTGAATTTGATGGTACTGAAGTTTTAAAGGGAGATGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS TCA 90 bp AGTGCTGAGGACACAGAAGTGAACAGGCAGGTTCCCTGCTTTCACTaGAGTAGAAGAAACCAACATAAACAAGGAAACATAATGAAGGAT +
Preference number: 5 (lower is better)
Translates to: SAEDTEVNRQVPCFH*SRRNQHKQGNIMKD
Trigger: ATCCTTCATTATGTTTCCTTGTTTATGTTGGTTTCTTCTACTTCAGTGAAAGCAGGGAACCTGCCTGTTCACTTCTGTGTCCTCAGCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550748.1
CDS CCA 90 bp TGGGAGGCCAGGCAGCAGATAATGAGCCTTGTACTTTGCTGGGAGTaGTACAGATGGGAAATTAAGTGTGTACAAATTAAAGAAATAAAG +
Preference number: 5 (lower is better)
Translates to: WEARQQIMSLVLCWE*YRWEIKCVQIKEIK
Trigger: CTTTATTTCTTTAATTTGTACACACTTAATTTCCCATCTGTACCACTCCCAGCAAAGTACAAGGCTCATTATCTGCTGCCTGGCCTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550748.1
CDS-3UTR CAA 90 bp TACTTACTAGCAATGGGGTGTCAGGCAAGTCAGCTTAAAACCTCTGCATGTCTCTATTTTAAGCATCCATaGATGATTCTGAGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: YLLAMGCQASQLKTSACLYFKHP*MILSCL
Trigger: GAGACAGCTCAGAATCATCAATGGATGCTTAAAATA...GAGACATGCAGAGGTTTTAAGCTGACTTGCCTGACACCCCATTGCTAGTAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CAA 90 bp GGTGTCAGGCAAGTCAGCTTAAAACCTCTGCATGTCTCAGATCCTTTATCTGTAGCTTTTCAGCTGGTTTaGTACTCTTTGCAATCTTTG +
Preference number: 5 (lower is better)
Translates to: GVRQVSLKPLHVSDPLSVAFQLV*YSLQSL
Trigger: CAAAGATTGCAAAGAGTACAAAACCAGCTGAAAAGC...TACAGATAAAGGATCTGAGACATGCAGAGGTTTTAAGCTGACTTGCCTGACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CAA 90 bp TATCAAGTAAAACCCCAAACGATGACACAAGAATTCACAGTATTAGCCGGTCCTCTCCTGGGTCAGTTCTaGATATTTTTGACGCAACTG +
Preference number: 5 (lower is better)
Translates to: YQVKPQTMTQEFTVLAGPLLGQF*IFLTQL
Trigger: CAGTTGCGTCAAAAATATCAAGAACTGACCCAGGAG...AGGACCGGCTAATACTGTGAATTCTTGTGTCATCGTTTGGGGTTTTACTTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR CAA 90 bp TGCCTAGCCTGTACCAAAATTCCAGAAAGAAGAAAGAAAGAAAGAGAGAGAGAGCCCATTAATGGCATTTaGTTTAAGCACAGTGCCCCT +
Preference number: 5 (lower is better)
Translates to: CLACTKIPERRKKEREREPINGI*FKHSAP
Trigger: AGGGGCACTGTGCTTAAACAAAATGCCATTAATGGG...CTCTCTCTCTCTTTCTTTCTTTCTTCTTTCTGGAATTTTGGTACAGGCTAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CAA 90 bp GGTGTCAGGCAAGTCAGCTTAAAACCTCTGCATGTCTCAGATCCTTTATCTGTAAAGTTTCCAGACTTTTaGTCCATTTTAGTCACCCTC +
Preference number: 5 (lower is better)
Translates to: GVRQVSLKPLHVSDPLSVKFPDF*SILVTL
Trigger: GAGGGTGACTAAAATGGACAAAAAGTCTGGAAACTT...TACAGATAAAGGATCTGAGACATGCAGAGGTTTTAAGCTGACTTGCCTGACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS TCA 90 bp AACTCATCTCCCTTTAAAACTTCAGTACCATCAAATTCACGGGTCTaGTTTCTCTTTACTGATGCTTCTCTCTCTAGGCTGGCTAACTTC +
Preference number: 5 (lower is better)
Translates to: NSSPFKTSVPSNSRV*FLFTDASLSRLANF
Trigger: GAAGTTAGCCAGCCTAGAGAGAGAAGCATCAGTAAAGAGAAATCAGACCCGTGAATTTGATGGTACTGAAGTTTTAAAGGGAGATGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp AATCCCATTAATGGCATTTTGTTTAAGCACAGTGCCCCTATCTACCAAGATGATTATCCACAAGTTGCTTaGGGTCAATCTCAGCCAGAA +
Preference number: 5 (lower is better)
Translates to: NPINGILFKHSAPIYQDDYPQVA*GQSQPE
Trigger: TTCTGGCTGAGATTGACCCAAAGCAACTTGTGGATA...ATCATCTTGGTAGATAGGGGCACTGTGCTTAAACAAAATGCCATTAATGGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CAA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGTATCCACAAGTTGCTTaGGGTCAATCTCAGCCAGAA +
Preference number: 5 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMYPQVA*GQSQPE
Trigger: TTCTGGCTGAGATTGACCCAAAGCAACTTGTGGATA...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp GGTGTCAGGCAAGTCAGCTTAAAACCTCTGCATGTCTCAGATCCTTTATCTGTATTGTTCCTGTTTCTGTaGTGCAAGATATTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: GVRQVSLKPLHVSDPLSVLFLFL*CKIFFS
Trigger: AGAGAAGAATATCTTGCACAACAGAAACAGGAACAA...TACAGATAAAGGATCTGAGACATGCAGAGGTTTTAAGCTGACTTGCCTGACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CAA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGCTCCTGGGTCAGTTCTaGATATTTTTGACGCAACTG +
Preference number: 5 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMLLGQF*IFLTQL
Trigger: CAGTTGCGTCAAAAATATCAAGAACTGACCCAGGAG...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGACTTCCTGTTCTAATTaGGACCGATTGCTTTCGAGG +
Preference number: 5 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMTSCSN*DRLLSR
Trigger: CCTCGAAAGCAATCGGTCCAAATTAGAACAGGAAGT...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp AGTCAGCTTAAAACCTCTGCATGTCTCAGATCCTTTATCTGTAAAAACTGGGTACTTGTAATAGTTGCATaGGCTCCAAGGAATCAAACG +
Preference number: 5 (lower is better)
Translates to: SQLKTSACLRSFICKNWVLVIVA*APRNQT
Trigger: CGTTTGATTCCTTGGAGCCAATGCAACTATTACAAG...TACCCAGTTTTTACAGATAAAGGATCTGAGACATGCAGAGGTTTTAAGCTGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CAA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTTATCCACAAGTTGCTTaGGGTCAATCTCAGCCAGAA +
Preference number: 5 (lower is better)
Translates to: GTAERQINVSSEQEILVPYPQVA*GQSQPE
Trigger: TTCTGGCTGAGATTGACCCAAAGCAACTTGTGGATA...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp TTACGGGAAATGATAGATGCCTGTTGCCTATACAGTGAGAGTTTGCCTTCAATGTATTTTAAGCATCCATaGATGATTCTGAGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: LREMIDACCLYSESLPSMYFKHP*MILSCL
Trigger: GAGACAGCTCAGAATCATCAATGGATGCTTAAAATA...CATTGAAGGCAAACTCTCACTGTATAGGCAACAGGCATCTATCATTTCCCGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551273.1
CDS-3UTR CAA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGCTGGTTTTGTACTCTTaGCAATCTTTGCACTGCATG +
Preference number: 5 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMLVLYS*QSLHCM
Trigger: CATGCAGTGCAAAGATTGCAAAGAGTACAAAACCAG...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTCTCCTGGGTCAGTTCTaGATATTTTTGACGCAACTG +
Preference number: 5 (lower is better)
Translates to: GTAERQINVSSEQEILVPLLGQF*IFLTQL
Trigger: CAGTTGCGTCAAAAATATCAAGAACTGACCCAGGAG...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGACTTCCTGTTCTAATTaGGACCGATTGCTTTCGAGG +
Preference number: 5 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVTSCSN*DRLLSR
Trigger: CCTCGAAAGCAATCGGTCCAAATTAGAACAGGAAGT...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp TATCAAGTAAAACCCCAAACGATGACACAAGAATTCACAGTATTAGCCGGTCCTGGAAGTTTGGCTTTGTaGTTTCAGAAAGCACTGTTT +
Preference number: 5 (lower is better)
Translates to: YQVKPQTMTQEFTVLAGPGSLAL*FQKALF
Trigger: AAACAGTGCTTTCTGAAACAACAAAGCCAAACTTCC...AGGACCGGCTAATACTGTGAATTCTTGTGTCATCGTTTGGGGTTTTACTTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS TCA 90 bp GCTGTCTCAACCCTTTTCTTCAAATGTTCAACTCTCTTAATGAGCTaGTCCTTTTCTTCTTCCATTGCACTGATATCCTGTTTATTGGTG +
Preference number: 5 (lower is better)
Translates to: AVSTLFFKCSTLLMS*SFSSSIALISCLLV
Trigger: CACCAATAAACAGGATATCAGTGCAATGGAAGAAGAAAAGGATCAGCTCATTAAGAGAGTTGAACATTTGAAGAAAAGGGTTGAGACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546374.5
CDS-3UTR CAA 90 bp ATAATCCCATTAATGGCATTTTGTTTAAGCACAGTGCCCCTATCTACCAAGATGCTAAAGGGCTCCTTATaGAGACTGTCCATAATGAAT +
Preference number: 5 (lower is better)
Translates to: IIPLMAFCLSTVPLSTKMLKGSL*RLSIMN
Trigger: ATTCATTATGGACAGTCTCAATAAGGAGCCCTTTAG...CATCTTGGTAGATAGGGGCACTGTGCTTAAACAAAATGCCATTAATGGGATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CAA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGCTAAAGGGCTCCTTATaGAGACTGTCCATAATGAAT +
Preference number: 5 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMLKGSL*RLSIMN
Trigger: ATTCATTATGGACAGTCTCAATAAGGAGCCCTTTAG...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000552912.5
CDS-3UTR CAA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTCTTGTAATAGTTGCATaGGCTCCAAGGAATCAAACG +
Preference number: 5 (lower is better)
Translates to: GTAERQINVSSEQEILVPLVIVA*APRNQT
Trigger: CGTTTGATTCCTTGGAGCCAATGCAACTATTACAAG...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000552912.5
CDS-3UTR CAA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGCTTGTAATAGTTGCATaGGCTCCAAGGAATCAAACG +
Preference number: 5 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVLVIVA*APRNQT
Trigger: CGTTTGATTCCTTGGAGCCAATGCAACTATTACAAG...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000552912.5
CDS-3UTR CAA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGTCTTCATACTGTTTATaGGTGTCAGCCACAGTTTCA +
Preference number: 5 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMSSYCL*VSATVS
Trigger: TGAAACTGTGGCTGACACCAATAAACAGTATGAAGA...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp TATCAAGTAAAACCCCAAACGATGACACAAGAATTCACAGTATTAGCCGGTCCTTATTTTAAGCATCCATaGATGATTCTGAGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: YQVKPQTMTQEFTVLAGPYFKHP*MILSCL
Trigger: GAGACAGCTCAGAATCATCAATGGATGCTTAAAATA...AGGACCGGCTAATACTGTGAATTCTTGTGTCATCGTTTGGGGTTTTACTTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550156.5
CDS-3UTR CAA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTCTGGTTTTGTACTCTTaGCAATCTTTGCACTGCATG +
Preference number: 5 (lower is better)
Translates to: GTAERQINVSSEQEILVPLVLYS*QSLHCM
Trigger: CATGCAGTGCAAAGATTGCAAAGAGTACAAAACCAG...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGGCTTTTCAGCTGGTTTaGTACTCTTTGCAATCTTTG +
Preference number: 5 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMAFQLV*YSLQSL
Trigger: CAAAGATTGCAAAGAGTACAAAACCAGCTGAAAAGC...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp TATTTCTTCCAGCTTTCTGTCATGTGCAAACTATTGATGACTCTACAGCCAGACATCATGTGTTTCAGGTaGACTATTTCTTCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: YFFQLSVMCKLLMTLQPDIMCFR*TISSSF
Trigger: AAAGCTGGAAGAAATAGTCAACCTGAAACACATGAT...GTCTGGCTGTAGAGTCATCAATAGTTTGCACATGACAGAAAGCTGGAAGAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CAA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTCTAAAGGGCTCCTTATaGAGACTGTCCATAATGAAT +
Preference number: 5 (lower is better)
Translates to: GTAERQINVSSEQEILVPLKGSL*RLSIMN
Trigger: ATTCATTATGGACAGTCTCAATAAGGAGCCCTTTAG...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000552912.5
CDS-3UTR CAA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGCCTGAAGAAACTCACTaGGTACCTCAAGTTTTATTA +
Preference number: 5 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMPEETH*VPQVLL
Trigger: TAATAAAACTTGAGGTACCAAGTGAGTTTCTTCAGG...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTTCTTCATACTGTTTATaGGTGTCAGCCACAGTTTCA +
Preference number: 5 (lower is better)
Translates to: GTAERQINVSSEQEILVPSSYCL*VSATVS
Trigger: TGAAACTGTGGCTGACACCAATAAACAGTATGAAGA...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp ACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGATGTTGTTCCTGTTTCTGTaGTGCAAGATATTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: TDSKLSFLSHKTQKTPVMLFLFL*CKIFFS
Trigger: AGAGAAGAATATCTTGCACAACAGAAACAGGAACAA...CATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTGCTTTTCAGCTGGTTTaGTACTCTTTGCAATCTTTG +
Preference number: 5 (lower is better)
Translates to: GTAERQINVSSEQEILVPAFQLV*YSLQSL
Trigger: CAAAGATTGCAAAGAGTACAAAACCAGCTGAAAAGC...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTGGAAGTTTGGCTTTGTaGTTTCAGAAAGCACTGTTT +
Preference number: 5 (lower is better)
Translates to: GTAERQINVSSEQEILVPGSLAL*FQKALF
Trigger: AAACAGTGCTTTCTGAAACAACAAAGCCAAACTTCC...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTCCTGAAGAAACTCACTaGGTACCTCAAGTTTTATTA +
Preference number: 5 (lower is better)
Translates to: GTAERQINVSSEQEILVPPEETH*VPQVLL
Trigger: TAATAAAACTTGAGGTACCAAGTGAGTTTCTTCAGG...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp TGTACCAAAATTCCAGAAAGAAGAAAGAAAGAAAGAGAGAGAGAGAGGAAGGAACCTGAAGAAACTCACTaGGTACCTCAAGTTTTATTA +
Preference number: 5 (lower is better)
Translates to: CTKIPERRKKERERERKEPEETH*VPQVLL
Trigger: TAATAAAACTTGAGGTACCAAGTGAGTTTCTTCAGG...TTCCTTCCTCTCTCTCTCTCTTTCTTTCTTTCTTCTTTCTGGAATTTTGGTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361948.8
CDS-3UTR CAA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGCCTGAAGAAACTCACTaGGTACCTCAAGTTTTATTA +
Preference number: 5 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVPEETH*VPQVLL
Trigger: TAATAAAACTTGAGGTACCAAGTGAGTTTCTTCAGG...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGTATTTTAAGCATCCATaGATGATTCTGAGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVYFKHP*MILSCL
Trigger: GAGACAGCTCAGAATCATCAATGGATGCTTAAAATA...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGTTGTTCCTGTTTCTGTaGTGCAAGATATTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVLFLFL*CKIFFS
Trigger: AGAGAAGAATATCTTGCACAACAGAAACAGGAACAA...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp GGAACTGCTGAACGTCAGATAAATGTTTCTTCAGAACAAGAGATATTAGTTCCTCTTTCCAAGGTTTTCTaGTTCAGCAGTATTTTTGGT +
Preference number: 5 (lower is better)
Translates to: GTAERQINVSSEQEILVPLSKVF*FSSIFG
Trigger: ACCAAAAATACTGCTGAACAAGAAAACCTTGGAAAG...AGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS-3UTR CAA 90 bp TTTACAGATAGTAAACTTAGTTTCCTGTCTCATAAAACTCAGAAGACGCCAGTGCTTTCCAAGGTTTTCTaGTTCAGCAGTATTTTTGGT +
Preference number: 5 (lower is better)
Translates to: FTDSKLSFLSHKTQKTPVLSKVF*FSSIFG
Trigger: ACCAAAAATACTGCTGAACAAGAAAACCTTGGAAAG...CACTGGCGTCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242591.10
ENST00000550156.5
ENST00000552912.5
CDS CCA 72 bp GGGCCCCTCGACAGTTCATCCCTCCAGGGAGCGGCCTaGATCCGCTCGAATCCCAGAAGGGGCCCGATTCCC +
Preference number: 6 (lower is better)
Translates to: GPLDSSSLQGAA*IRSNPRRGPIP
Trigger: GGGAATCGGGCCCCTTCTGGGATTCGAGCGGATCCAGGCCGCTCCCTGGAGGGATGAACTGTCGAGGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS CAA 72 bp CCTATCCGGGGGCTTAACCGCGACGACCCCTTCCACTaGCGAGGTGCTGCATCAGGACCGAGAGAGGACGGG +
Preference number: 6 (lower is better)
Translates to: PIRGLNRDDPFH*RGAASGPREDG
Trigger: CCCGTCCTCTCTCGGTCCTGATGCAGCACCTCGCAAGTGGAAGGGGTCGTCGCGGTTAAGCCCCCGGATAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS GCA 72 bp CTATCCGGGGGCTTAACCGCGACGACCCCTTCCACTTaGGAGGTGCTGCATCAGGACCGAGAGAGGACGGGA +
Preference number: 6 (lower is better)
Translates to: LSGGLTATTPST*EVLHQDRERTG
Trigger: TCCCGTCCTCTCTCGGTCCTGATGCAGCACCTCGCAAGTGGAAGGGGTCGTCGCGGTTAAGCCCCCGGATAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS CCA 72 bp ATTTGGGAGAGAAACCGTGCTGCCTGGGTCCCAGGCTaGCACGAGCATCGACCCGCAGCCTCCTGGGAGTAC +
Preference number: 6 (lower is better)
Translates to: IWERNRAAWVPG*HEHRPAASWEY
Trigger: GTACTCCCAGGAGGCTGCGGGTCGATGCTCGTGCCAGCCTGGGACCCAGGCAGCACGGTTTCTCTCCCAAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS GCA 72 bp CGTGTTCTCTGGCACAATTTGGGAGAGAAACCGTGCTaGCTGGGTCCCAGGCTGGCACGAGCATCGACCCGC +
Preference number: 6 (lower is better)
Translates to: RVLWHNLGEKPC*LGPRLARASTR
Trigger: GCGGGTCGATGCTCGTGCCAGCCTGGGACCCAGGCAGCACGGTTTCTCTCCCAAATTGTGCCAGAGAACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS CCA 72 bp TTCTCTGGCACAATTTGGGAGAGAAACCGTGCTGCCTaGGTCCCAGGCTGGCACGAGCATCGACCCGCAGCC +
Preference number: 6 (lower is better)
Translates to: FSGTIWERNRAA*VPGWHEHRPAA
Trigger: GGCTGCGGGTCGATGCTCGTGCCAGCCTGGGACCCAGGCAGCACGGTTTCTCTCCCAAATTGTGCCAGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS GCA 72 bp GTGCGTGTTCTCTGGCACAATTTGGGAGAGAAACCGTaGTGCCTGGGTCCCAGGCTGGCACGAGCATCGACC +
Preference number: 6 (lower is better)
Translates to: VRVLWHNLGEKP*CLGPRLARAST
Trigger: GGTCGATGCTCGTGCCAGCCTGGGACCCAGGCAGCACGGTTTCTCTCCCAAATTGTGCCAGAGAACACGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS CAA 90 bp GAGCTCTCTCCTATTTCGGGGTTCAGAGGAGCTTCCGACCGCGAGTaGGCGAGGTTACCTCAAATTCTCCTCACGAAACCGTTTCCCCAC +
Preference number: 6 (lower is better)
Translates to: ELSPISGFRGASDRE*ARLPQILLTKPFPH
Trigger: GTGGGGAAACGGTTTCGTGAGGAGAATTTGAGGTAACCTCGCCAACTCGCGGTCGGAAGCTCCTCTGAACCCCGAAATAGGAGAGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS CCA 72 bp GCGGGGAACAATGAAAACCAGGACGTGCGTGTTCTCTaGCACAATTTGGGAGAGAAACCGTGCTGCCTGGGT +
Preference number: 6 (lower is better)
Translates to: AGNNENQDVRVL*HNLGEKPCCLG
Trigger: ACCCAGGCAGCACGGTTTCTCTCCCAAATTGTGCCAGAGAACACGCACGTCCTGGTTTTCATTGTTCCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS CAA 72 bp CCTATTTCGGGGTTCAGAGGAGCTTCCGACCGCGAGTaGGCGAGGTTACCTCAAATTCTCCTCACGAAACCG +
Preference number: 6 (lower is better)
Translates to: PISGFRGASDRE*ARLPQILLTKP
Trigger: CGGTTTCGTGAGGAGAATTTGAGGTAACCTCGCCAACTCGCGGTCGGAAGCTCCTCTGAACCCCGAAATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS CAA 72 bp AATGAAAACCAGGACGTGCGTGTTCTCTGGCACAATTaGGGAGAGAAACCGTGCTGCCTGGGTCCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: NENQDVRVLWHN*GEKPCCLGPRL
Trigger: CAGCCTGGGACCCAGGCAGCACGGTTTCTCTCCCAAATTGTGCCAGAGAACACGCACGTCCTGGTTTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS GCA 72 bp AGTCGCAGGAGGCGGGGAACAATGAAAACCAGGACGTaGGTGTTCTCTGGCACAATTTGGGAGAGAAACCGT +
Preference number: 6 (lower is better)
Translates to: SRRRRGTMKTRT*VFSGTIWERNR
Trigger: ACGGTTTCTCTCCCAAATTGTGCCAGAGAACACGCACGTCCTGGTTTTCATTGTTCCCCGCCTCCTGCGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS CCA 72 bp CTATTTCGGGGTTCAGAGGAGCTTCCGACCGCGAGTTaGCGAGGTTACCTCAAATTCTCCTCACGAAACCGT +
Preference number: 6 (lower is better)
Translates to: LFRGSEELPTAS*RGYLKFSSRNR
Trigger: ACGGTTTCGTGAGGAGAATTTGAGGTAACCTCGCCAACTCGCGGTCGGAAGCTCCTCTGAACCCCGAAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS CCA 72 bp ATAGAGGGACTGGGTGGGCCAGGTTGGGAAGAAGAGTaGGTAACATCAGGTGATCAGAGATCTCTGAAAGGC +
Preference number: 6 (lower is better)
Translates to: IEGLGGPGWEEE*VTSGDQRSLKG
Trigger: GCCTTTCAGAGATCTCTGATCACCTGATGTTACCCACTCTTCTTCCCAACCTGGCCCACCCAGTCCCTCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550748.1
CDS CCA 72 bp GGAAATCCATCAGTAGAATGTGATAGAGGGACTGGGTaGGCCAGGTTGGGAAGAAGAGTGGGTAACATCAGG +
Preference number: 6 (lower is better)
Translates to: GNPSVECDRGTG*ARLGRRVGNIR
Trigger: CCTGATGTTACCCACTCTTCTTCCCAACCTGGCCCACCCAGTCCCTCTATCACATTCTACTGATGGATTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550748.1
CDS TCA 72 bp TTTAACCACAAACGAGTCGCAGGAGGCGGGGAACAATaGAAACCAGGACGTGCGTGTTCTCTGGCACAATTT +
Preference number: 6 (lower is better)
Translates to: FNHKRVAGGGEQ*KPGRACSLAQF
Trigger: AAATTGTGCCAGAGAACACGCACGTCCTGGTTTTCATTGTTCCCCGCCTCCTGCGACTCGTTTGTGGTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242591.10
ENST00000361948.8
CDS TCA 72 bp ACATTCGTTTGGCTGTCTGCTCTGGCATCTCCTCTCTaGTATCCACAAGTTGCTTTGGGTCAATCTCAGCCA +
Preference number: 6 (lower is better)
Translates to: TFVWLSALASPL*YPQVALGQSQP
Trigger: TGGCTGAGATTGACCCAAAGCAACTTGTGGATATCAGAGAGGAGATGCCAGAGCAGACAGCCAAACGAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000242591.10
ENST00000361948.8
ENST00000546374.5
ENST00000550156.5
ENST00000552912.5
CDS TCA 72 bp TCAGGAAGAAGGTCAGAGTGGCTGAAGCTCCATGGATaGGGAGTAGAGCACATGGACATGAAGTTCATAAGG +
Preference number: 6 (lower is better)
Translates to: SGRRSEWLKLHG*GVEHMDMKFIR
Trigger: CCTTATGAACTTCATGTCCATGTGCTCTACTCCTCATCCATGGAGCTTCAGCCACTCTGACCTTCTTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550748.1
CDS CCA 72 bp AAGCTCAGGAAGAAGGTCAGAGTGGCTGAAGCTCCATaGATGAGGAGTAGAGCACATGGACATGAAGTTCAT +
Preference number: 6 (lower is better)
Translates to: KLRKKVRVAEAP*MRSRAHGHEVH
Trigger: ATGAACTTCATGTCCATGTGCTCTACTCCTCATCCATGGAGCTTCAGCCACTCTGACCTTCTTCCTGAGCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550748.1
CDS GCA 72 bp AGAATACCAAGAAGGCTCAACATTCGTTTGGCTGTCTaGTCTGGCATCTCCTCTCTGATATCCACAAGTTGC +
Preference number: 6 (lower is better)
Translates to: RIPRRLNIRLAV*SGISSLISTSC
Trigger: GCAACTTGTGGATATCAGAGAGGAGATGCCAGAGCAGACAGCCAAACGAATGTTGAGCCTTCTTGGTATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000242591.10
ENST00000361948.8
ENST00000546374.5
ENST00000550156.5
ENST00000552912.5
CDS CAA 90 bp CCTGAAGGTTTGTACTTAAGAATACCAAGAAGGCTCAACATTCGTTaGGCTGTCTGCTCTGGCATCTCCTCTCTGATATCCACAAGTTGC +
Preference number: 6 (lower is better)
Translates to: PEGLYLRIPRRLNIR*AVCSGISSLISTSC
Trigger: GCAACTTGTGGATATCAGAGAGGAGATGCCAGAGCAGACAGCCAAACGAATGTTGAGCCTTCTTGGTATTCTTAAGTACAAACCTTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000242591.10
ENST00000361948.8
ENST00000546374.5
ENST00000550156.5
ENST00000552912.5
CDS TCA 72 bp GGTGACAGAGAAAGACTCTGTCTGTTGCCTATACAGTaGGAGTTTGCCTTCAATGGGCTCATTTCTCATCAT +
Preference number: 6 (lower is better)
Translates to: GDRERLCLLPIQ*EFAFNGLISHH
Trigger: ATGATGAGAAATGAGCCCATTGAAGGCAAACTCTCACTGTATAGGCAACAGACAGAGTCTTTCTCTGTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549009.1
CDS GCA 72 bp AACTTTCAGGCTTTGCATCTGCTGCAGCTTGGCGCATaGTTTTCAGCTGGTTTTGTACTCTTTGCAATCTTT +
Preference number: 6 (lower is better)
Translates to: NFQALHLLQLGA*FSAGFVLFAIF
Trigger: AAAGATTGCAAAGAGTACAAAACCAGCTGAAAAGCATGCGCCAAGCTGCAGCAGATGCAAAGCCTGAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000242591.10
ENST00000361948.8
ENST00000546374.5
ENST00000550156.5
ENST00000552912.5
CDS CCA 72 bp TTCATTAAACTTTCAGGCTTTGCATCTGCTGCAGCTTaGCGCATGCTTTTCAGCTGGTTTTGTACTCTTTGC +
Preference number: 6 (lower is better)
Translates to: FIKLSGFASAAA*RMLFSWFCTLC
Trigger: GCAAAGAGTACAAAACCAGCTGAAAAGCATGCGCCAAGCTGCAGCAGATGCAAAGCCTGAAAGTTTAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000242591.10
ENST00000361948.8
ENST00000546374.5
ENST00000550156.5
ENST00000552912.5
CDS CCA 72 bp AAGAGTAGAAGCAAGAGAATAGGTAAGAGTTTACTGTaGGAGGCCAGGCAGCAGATAATGAGCCTTGTACTT +
Preference number: 6 (lower is better)
Translates to: KSRSKRIGKSLL*EARQQIMSLVL
Trigger: AAGTACAAGGCTCATTATCTGCTGCCTGGCCTCCCACAGTAAACTCTTACCTATTCTCTTGCTTCTACTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550748.1
CDS CAA 72 bp GAAGAGTACATGCAAAATCCCAAAGTGAAAACAAGCTaGGCCTGTTTAAAGCTCAGGAAGAAGGTCAGAGTG +
Preference number: 6 (lower is better)
Translates to: EEYMQNPKVKTS*ACLKLRKKVRV
Trigger: CACTCTGACCTTCTTCCTGAGCTTTAAACAGGCCAAGCTTGTTTTCACTTTGGGATTTTGCATGTACTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550748.1
CDS CAA 72 bp AATAGCTACCATGTATTGAGCTGTGTGCCAGGTTCTTaGTTAGGAGCTGGGGAGACAATAGTGAATAAAACA +
Preference number: 6 (lower is better)
Translates to: NSYHVLSCVPGS*LGAGETIVNKT
Trigger: TGTTTTATTCACTATTGTCTCCCCAGCTCCTAACAAAGAACCTGGCACACAGCTCAATACATGGTAGCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550748.1
CDS CAA 72 bp CGAAAAGTACTCATATCTGTGGCATTTCCTGAAGGTTaGTACTTAAGAATACCAAGAAGGCTCAACATTCGT +
Preference number: 6 (lower is better)
Translates to: RKVLISVAFPEG*YLRIPRRLNIR
Trigger: ACGAATGTTGAGCCTTCTTGGTATTCTTAAGTACAAACCTTCAGGAAATGCCACAGATATGAGTACTTTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000242591.10
ENST00000361948.8
ENST00000546374.5
ENST00000550156.5
ENST00000552912.5
CDS TCA 72 bp AACCAACATAAACAAGGAAACATAATGAAGGATATTTaGGATGGGGATAAGCGCTATGAAGGAAATCCATCA +
Preference number: 6 (lower is better)
Translates to: NQHKQGNIMKDI*DGDKRYEGNPS
Trigger: TGATGGATTTCCTTCATAGCGCTTATCCCCATCTCAAATATCCTTCATTATGTTTCCTTGTTTATGTTGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550748.1
CDS CCA 72 bp ATAATGAGCCTTGTACTTTGCTGGGAGTGGTACAGATaGGAAATTAAGTGTGTACAAATTAAAGAAATAAAG +
Preference number: 6 (lower is better)
Translates to: IMSLVLCWEWYR*EIKCVQIKEIK
Trigger: CTTTATTTCTTTAATTTGTACACACTTAATTTCCCATCTGTACCACTCCCAGCAAAGTACAAGGCTCATTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550748.1