Pregenerated sensors for IFT80 (Homo sapiens)
Ensembl gene IDs: ENSG00000068885Ensembl transcript IDs: ENST00000326448.12, ENST00000466326.1, ENST00000472555.5, ENST00000478278.1, ENST00000478536.1, ENST00000483465.5, ENST00000487943.5
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGCCATTTCCTCCTCCCTaGAGTCCCTGGCAACCACTA | + |
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Preference number: 2 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWPFPPP*SPWQPL Trigger: TAGTGGTTGCCAGGGACTGCAGGGAGGAGGAAATGG...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR-3UTR CCA 90 bp | CAAAATGTTGAGCAACCATCATCGCTATCCATTTCCAGAATTTGTTCATCCCAACCTCCCTGCAGTCCCTaGCAACCACTATTCTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: QNVEQPSSLSISRICSSQPPCSP*QPLFSF Trigger: AAAGGAGAATAGTGGTTGCCAGGGACTGCAGGGAGG...TTGGGATGAACAAATTCTGGAAATGGATAGCGATGATGGTTGCTCAACATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR-3UTR CCA 90 bp | ACTCCCAATGTTGTTCCACCACATGTGCAAAAACGACATGTCCATTTCCACAGGATATGCTGCCAGTGTTaGGTTTTTCTAATGCATATG | + |
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Preference number: 2 (lower is better) Translates to: TPNVVPPHVQKRHVHFHRICCQC*VFLMHM Trigger: CATATGCATTAGAAAAACCCAACACTGGCAGCATAT...CCTGTGGAAATGGACATGTCGTTTTTGCACATGTGGTGGAACAACATTGGGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000472555.5 |
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| 3UTR-3UTR TCA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGAAGTCAAGAGAGGAATaGGGAGAATCCTTCTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWKSREE*GESFLP Trigger: GGGCAAGAAGGATTCTCCTCATTCCTCTCTTGACTT...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR-3UTR TCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCAAGTCAAGAGAGGAATaGGGAGAATCCTTCTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFKSREE*GESFLP Trigger: GGGCAAGAAGGATTCTCCTCATTCCTCTCTTGACTT...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR-3UTR TCA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGTCAGGGCCTATTGACTaGTCATTCTCAAGTCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWSGPID*SFSSQE Trigger: CTCTTGACTTGAGAATGATCAGTCAATAGGCCCTGA...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR-3UTR TCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCTCAGGGCCTATTGACTaGTCATTCTCAAGTCAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFSGPID*SFSSQE Trigger: CTCTTGACTTGAGAATGATCAGTCAATAGGCCCTGA...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR-3UTR CCA 90 bp | CAAAATGTTGAGCAACCATCATCGCTATCCATTTCCAGAATTTGTTCATCCCAAAAGTGGCATCATATTTaGCCTTTTGTGTCTGGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: QNVEQPSSLSISRICSSQKWHHI*PFVSGL Trigger: TAAGCCAGACACAAAAGGCCAAATATGATGCCACTT...TTGGGATGAACAAATTCTGGAAATGGATAGCGATGATGGTTGCTCAACATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR-3UTR GCA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGGCTGTTTCCATCTTTTaGTATTCCAGTAATGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWAVSIF*YSSNAA Trigger: AGCAGCATTACTGGAATAGCAAAAGATGGAAACAGC...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR-3UTR CCA 90 bp | CAAAATGTTGAGCAACCATCATCGCTATCCATTTCCAGAATTTGTTCATCCCAATTGGCCTTTTGTGTCTaGCTTATTTCACTTAGCATA | + |
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Preference number: 2 (lower is better) Translates to: QNVEQPSSLSISRICSSQLAFCV*LISLSI Trigger: TATGCTAAGTGAAATAAGCCAGACACAAAAGGCCAA...TTGGGATGAACAAATTCTGGAAATGGATAGCGATGATGGTTGCTCAACATTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR-3UTR GCA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGTTAGCAACCAAAACATaGTTACCCTTGGTTAATCAG | + |
|
Preference number: 2 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWLATKT*LPLVNQ Trigger: CTGATTAACCAAGGGTAAGCATGTTTTGGTTGCTAA...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR-3UTR GCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCTTTCAGAAATGGGTTTaGAGAAGACTTTCTAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFFQKWV*RRLSKG Trigger: CCCCTTAGAAAGTCTTCTGCAAACCCATTTCTGAAA...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR-3UTR CCA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGTTGGCCTTTTGTGTCTaGCTTATTTCACTTAGCATA | + |
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Preference number: 2 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWLAFCV*LISLSI Trigger: TATGCTAAGTGAAATAAGCCAGACACAAAAGGCCAA...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR-3UTR CCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCAAGTGGCATCATATTTaGCCTTTTGTGTCTGGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFKWHHI*PFVSGL Trigger: TAAGCCAGACACAAAAGGCCAAATATGATGCCACTT...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR-3UTR GCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCTTAGCAACCAAAACATaGTTACCCTTGGTTAATCAG | + |
|
Preference number: 2 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFLATKT*LPLVNQ Trigger: CTGATTAACCAAGGGTAAGCATGTTTTGGTTGCTAA...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR-3UTR CCA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGTACCATTTTCAGAAATaGGTTTGCAGAAGACTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWYHFQK*VCRRLS Trigger: AGAAAGTCTTCTGCAAACCCATTTCTGAAAATGGTA...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR-3UTR GCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATAATCCCATATCTATaGATCTATACCCACCCTATA | + |
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Preference number: 2 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFIIPYL*IYTHPI Trigger: TATAGGGTGGGTATAGATGCATAGATATGGGATTAT...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR-3UTR CAA 90 bp | CAAAATGTTGAGCAACCATCATCGCTATCCATTTCCAGAATTTGTTCATCCCAAATTCATGATAGACACTaGAGCTGTTTCCATCTTTTG | + |
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Preference number: 3 (lower is better) Translates to: QNVEQPSSLSISRICSSQIHDRH*SCFHLL Trigger: CAAAAGATGGAAACAGCTCAAGTGTCTATCATGAAT...TTGGGATGAACAAATTCTGGAAATGGATAGCGATGATGGTTGCTCAACATTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR-3UTR CAA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGATTCATGATAGACACTaGAGCTGTTTCCATCTTTTG | + |
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Preference number: 3 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWIHDRH*SCFHLL Trigger: CAAAAGATGGAAACAGCTCAAGTGTCTATCATGAAT...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR-3UTR CAA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGATCCATTTCCAGAATTaGTTCATCCCAAACAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWIHFQN*FIPNRN Trigger: GTTTCTGTTTGGGATGAACAAATTCTGGAAATGGAT...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR-3UTR CAA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCATATTTGGCCTTTaGTGTCTGGCTTATTTCACT | + |
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Preference number: 3 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFIIFGL*CLAYFT Trigger: AGTGAAATAAGCCAGACACAAAAGGCCAAATATGAT...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR CCA 72 bp | ACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTaGATCAAGAACAGAATATTCCAATATTCCGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: TTCKYTAQSDFI*IKNRIFQYSGK Trigger: TTTTCCGGAATATTGGAATATTCTGTTCTTGATCCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS-3UTR TCA 90 bp | CCACTCCCAATGTTGTTCCACCACATGTGCAAAAACGACATGTCCATTTCCACACAGGCTCCAGCAATCTaGGTGCCATCGATAGACCAT | + |
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Preference number: 4 (lower is better) Translates to: PLPMLFHHMCKNDMSISTQAPAI*VPSIDH Trigger: ATGGTCTATCGATGGCACTCAGATTGCTGGAGCCTG...TGTGGAAATGGACATGTCGTTTTTGCACATGTGGTGGAACAACATTGGGAGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000472555.5 |
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| CDS-3UTR TCA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGAGGGCCCCACGCTACTaGATACACTGGTGTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWRAPRY*IHWCSL Trigger: CAAGGAACACCAGTGTATTCAGTAGCGTGGGGCCCT...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS-3UTR TCA 90 bp | CAAAATGTTGAGCAACCATCATCGCTATCCATTTCCAGAATTTGTTCATCCCAACAGGCTCCAGCAATCTaGGTGCCATCGATAGACCAT | + |
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Preference number: 4 (lower is better) Translates to: QNVEQPSSLSISRICSSQQAPAI*VPSIDH Trigger: ATGGTCTATCGATGGCACTCAGATTGCTGGAGCCTG...TTGGGATGAACAAATTCTGGAAATGGATAGCGATGATGGTTGCTCAACATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS-3UTR TCA 90 bp | CAAAATGTTGAGCAACCATCATCGCTATCCATTTCCAGAATTTGTTCATCCCAAGGTGTTATGCTGATGTaGACCAGGGAGCCATCAGCT | + |
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Preference number: 4 (lower is better) Translates to: QNVEQPSSLSISRICSSQGVMLM*TREPSA Trigger: AGCTGATGGCTCCCTGGTTCACATCAGCATAACACC...TTGGGATGAACAAATTCTGGAAATGGATAGCGATGATGGTTGCTCAACATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS-3UTR GCA 90 bp | TTCCACCACATGTGCAAAAACGACATGTCCATTTCCACAGGCTCCAGCAATCTGTTGTTCCACCACATGTaGAAAAACGACATGTCCATT | + |
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Preference number: 4 (lower is better) Translates to: FHHMCKNDMSISTGSSNLLFHHM*KNDMSI Trigger: AATGGACATGTCGTTTTTGCACATGTGGTGGAACAA...CAGATTGCTGGAGCCTGTGGAAATGGACATGTCGTTTTTGCACATGTGGTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000472555.5 |
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| CDS-3UTR GCA 90 bp | TTCCACCACATGTGCAAAAACGACATGTCCATTTCCACAGGCTCCAGCAATCTGAGAACATTACGAACCTaGATGGCTCTTCTTTTCGTT | + |
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Preference number: 4 (lower is better) Translates to: FHHMCKNDMSISTGSSNLRTLRT*MALLFV Trigger: AACGAAAAGAAGAGCCATGCAGGTTCGTAATGTTCT...CAGATTGCTGGAGCCTGTGGAAATGGACATGTCGTTTTTGCACATGTGGTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000472555.5 |
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| CDS-3UTR TCA 90 bp | CACTCCCAATGTTGTTCCACCACATGTGCAAAAACGACATGTCCATTTCCACAGCACAAGCGTAAAGTATaGAACGATCCAACAGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: HSQCCSTTCAKTTCPFPQHKRKV*NDPTAN Trigger: ATTTGCTGTTGGATCGTTTCATACTTTACGCTTGTG...CTGTGGAAATGGACATGTCGTTTTTGCACATGTGGTGGAACAACATTGGGAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000472555.5 |
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| CDS-3UTR TCA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGCAGGCTCCAGCAATCTaGGTGCCATCGATAGACCAT | + |
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Preference number: 4 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWQAPAI*VPSIDH Trigger: ATGGTCTATCGATGGCACTCAGATTGCTGGAGCCTG...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS-3UTR CCA 90 bp | CATGTGCAAAAACGACATGTCCATTTCCACAGGCTCCAGCAATCTGAGTGCCATATATGCTGCCAGTGTTaGGTTTTTCTAATGCATATG | + |
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Preference number: 4 (lower is better) Translates to: HVQKRHVHFHRLQQSECHICCQC*VFLMHM Trigger: CATATGCATTAGAAAAACCCAACACTGGCAGCATAT...ATGGCACTCAGATTGCTGGAGCCTGTGGAAATGGACATGTCGTTTTTGCACATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000472555.5 |
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| CDS-3UTR CCA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGCCTCCCTGCAGTCCCTaGCAACCACTATTCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWPPCSP*QPLFSF Trigger: AAAGGAGAATAGTGGTTGCCAGGGACTGCAGGGAGG...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| 3UTR CAA 72 bp | CTGGCAACCACTATTCTCCTTTCTGTTTCTGTGAACTaGCCTATGCTGGTACCTCATAAAAGTGGCATCATA | + |
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Preference number: 4 (lower is better) Translates to: LATTILLSVSVN*PMLVPHKSGII Trigger: TATGATGCCACTTTTATGAGGTACCAGCATAGGCAAGTTCACAGAAACAGAAAGGAGAATAGTGGTTGCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS-3UTR TCA 90 bp | CAAAATGTTGAGCAACCATCATCGCTATCCATTTCCAGAATTTGTTCATCCCAAATAAAGAACCTTTTCTaGATCAGGGCCCCACGCTAC | + |
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Preference number: 4 (lower is better) Translates to: QNVEQPSSLSISRICSSQIKNLF*IRAPRY Trigger: GTAGCGTGGGGCCCTGATTCAGAAAAGGTTCTTTAT...TTGGGATGAACAAATTCTGGAAATGGATAGCGATGATGGTTGCTCAACATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS-3UTR TCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCGGTGTTATGCTGATGTaGACCAGGGAGCCATCAGCT | + |
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Preference number: 4 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFGVMLM*TREPSA Trigger: AGCTGATGGCTCCCTGGTTCACATCAGCATAACACC...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS-3UTR TCA 90 bp | CAAAATGTTGAGCAACCATCATCGCTATCCATTTCCAGAATTTGTTCATCCCAAGATATGGTGTTATGCTaGTGTGAACCAGGGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: QNVEQPSSLSISRICSSQDMVLC*CEPGSH Trigger: ATGGCTCCCTGGTTCACATCAGCATAACACCATATC...TTGGGATGAACAAATTCTGGAAATGGATAGCGATGATGGTTGCTCAACATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS-3UTR TCA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGGATATGGTGTTATGCTaGTGTGAACCAGGGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWDMVLC*CEPGSH Trigger: ATGGCTCCCTGGTTCACATCAGCATAACACCATATC...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS-3UTR TCA 90 bp | CAAAATGTTGAGCAACCATCATCGCTATCCATTTCCAGAATTTGTTCATCCCAATCAGGGCCTATTGACTaGTCATTCTCAAGTCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: QNVEQPSSLSISRICSSQSGPID*SFSSQE Trigger: CTCTTGACTTGAGAATGATCAGTCAATAGGCCCTGA...TTGGGATGAACAAATTCTGGAAATGGATAGCGATGATGGTTGCTCAACATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS-3UTR GCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCGAAAGCGGTGGCGATTaGTCTCAAATACCTGGTACC | + |
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Preference number: 4 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFESGGD*SQIPGT Trigger: GGTACCAGGTATTTGAGAGCAATCGCCACCGCTTTC...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326448.12 |
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| CDS-3UTR GCA 90 bp | CCACTCCCAATGTTGTTCCACCACATGTGCAAAAACGACATGTCCATTTCCACATGCATAGTTCAAAGATaGTTTAATGACTCTATCACG | + |
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Preference number: 4 (lower is better) Translates to: PLPMLFHHMCKNDMSISTCIVQR*FNDSIT Trigger: CGTGATAGAGTCATTAAAGCATCTTTGAACTATGCA...TGTGGAAATGGACATGTCGTTTTTGCACATGTGGTGGAACAACATTGGGAGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000472555.5 |
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| CDS-3UTR GCA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGTACAGCCAATTCCAGTaGCCTTTCCCAGTTGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWYSQFQ*PFPVVE Trigger: CTCTACAACTGGGAAAGGGCACTGGAATTGGCTGTA...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS-3UTR TCA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGACTGGTGTTCCTTGCTaGGCTAAAGTTGATCTAAGC | + |
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Preference number: 4 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWTGVPC*AKVDLS Trigger: GCTTAGATCAACTTTAGCTCAGCAAGGAACACCAGT...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS-3UTR TCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATAAAGAACCTTTTCTaGATCAGGGCCCCACGCTAC | + |
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Preference number: 4 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFIKNLF*IRAPRY Trigger: GTAGCGTGGGGCCCTGATTCAGAAAAGGTTCTTTAT...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS-3UTR GCA 90 bp | CAAAATGTTGAGCAACCATCATCGCTATCCATTTCCAGAATTTGTTCATCCCAAGTCCACAAAGGATATTaGATGTATCGTTCCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QNVEQPSSLSISRICSSQVHKGY*MYRSMP Trigger: TGGCATGGAACGATACATGCAATATCCTTTGTGGAC...TTGGGATGAACAAATTCTGGAAATGGATAGCGATGATGGTTGCTCAACATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR GCA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGCAAGCCCACATGGTTTaGTCCTTAACAAAGCGACAA | + |
|
Preference number: 4 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWQAHMV*SLTKRQ Trigger: TTGTCGCTTTGTTAAGGAGCAAACCATGTGGGCTTG...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR GCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCTACAGCCAATTCCAGTaGCCTTTCCCAGTTGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFYSQFQ*PFPVVE Trigger: CTCTACAACTGGGAAAGGGCACTGGAATTGGCTGTA...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR CCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCTTGCTCTCAAATACCTaGTACCTCCCCGTCACCATA | + |
|
Preference number: 4 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFLLSNT*YLPVTI Trigger: TATGGTGACGGGGAGGTACCAGGTATTTGAGAGCAA...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326448.12 |
||
| CDS-3UTR TCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCACTGGTGTTCCTTGCTaGGCTAAAGTTGATCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFTGVPC*AKVDLS Trigger: GCTTAGATCAACTTTAGCTCAGCAAGGAACACCAGT...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR GCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCCAAGCCCACATGGTTTaGTCCTTAACAAAGCGACAA | + |
|
Preference number: 4 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFQAHMV*SLTKRQ Trigger: TTGTCGCTTTGTTAAGGAGCAAACCATGTGGGCTTG...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR GCA 90 bp | CAAAATGTTGAGCAACCATCATCGCTATCCATTTCCAGAATTTGTTCATCCCAAGCTGTTTCCATCTTTTaGTATTCCAGTAATGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QNVEQPSSLSISRICSSQAVSIF*YSSNAA Trigger: AGCAGCATTACTGGAATAGCAAAAGATGGAAACAGC...TTGGGATGAACAAATTCTGGAAATGGATAGCGATGATGGTTGCTCAACATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR GCA 90 bp | CAAAATGTTGAGCAACCATCATCGCTATCCATTTCCAGAATTTGTTCATCCCAATTTCAGAAATGGGTTTaGAGAAGACTTTCTAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QNVEQPSSLSISRICSSQFQKWV*RRLSKG Trigger: CCCCTTAGAAAGTCTTCTGCAAACCCATTTCTGAAA...TTGGGATGAACAAATTCTGGAAATGGATAGCGATGATGGTTGCTCAACATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR TCA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGCACAAGCGTAAAGTATaGAACGATCCAACAGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWHKRKV*NDPTAN Trigger: ATTTGCTGTTGGATCGTTTCATACTTTACGCTTGTG...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR GCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATAATTCCATCTTCCTaGAAGTACTGCTCCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFIIPSS*KYCSTV Trigger: CACTGTGGAGCAGTACTTGCAGGAAGATGGAATTAT...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR GCA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGTTGTTCCACCACATGTaGAAAAACGACATGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWLFHHM*KNDMSI Trigger: AATGGACATGTCGTTTTTGCACATGTGGTGGAACAA...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR GCA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGAGAACATTACGAACCTaGATGGCTCTTCTTTTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWRTLRT*MALLFV Trigger: AACGAAAAGAAGAGCCATGCAGGTTCGTAATGTTCT...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR GCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCGTCCACAAAGGATATTaGATGTATCGTTCCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFVHKGY*MYRSMP Trigger: TGGCATGGAACGATACATGCAATATCCTTTGTGGAC...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR GCA 90 bp | CAAAATGTTGAGCAACCATCATCGCTATCCATTTCCAGAATTTGTTCATCCCAATGCATAGGCTATTTCTaGAGTAGTCATATCTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: QNVEQPSSLSISRICSSQCIGYF*SSHISI Trigger: AATCGAGATATGACTACTGCAGAAATAGCCTATGCA...TTGGGATGAACAAATTCTGGAAATGGATAGCGATGATGGTTGCTCAACATTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR GCA 90 bp | CAAAATGTTGAGCAACCATCATCGCTATCCATTTCCAGAATTTGTTCATCCCAAAATTTCACCAATTGCTaGATAGGCTATTTCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QNVEQPSSLSISRICSSQNFTNC*IGYFCS Trigger: ACTGCAGAAATAGCCTATGCAGCAATTGGTGAAATT...TTGGGATGAACAAATTCTGGAAATGGATAGCGATGATGGTTGCTCAACATTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR GCA 90 bp | CAAAATGTTGAGCAACCATCATCGCTATCCATTTCCAGAATTTGTTCATCCCAATTAGCAACCAAAACATaGTTACCCTTGGTTAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: QNVEQPSSLSISRICSSQLATKT*LPLVNQ Trigger: CTGATTAACCAAGGGTAAGCATGTTTTGGTTGCTAA...TTGGGATGAACAAATTCTGGAAATGGATAGCGATGATGGTTGCTCAACATTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR CCA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGTGTTCCAGTTCTTCGTaGAGAACACGTAACATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWCSSSS*RTRNIE Trigger: TTCAATGTTACGTGTTCTCCACGAAGAACTGGAACA...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR TCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCCACAAGCGTAAAGTATaGAACGATCCAACAGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFHKRKV*NDPTAN Trigger: ATTTGCTGTTGGATCGTTTCATACTTTACGCTTGTG...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR GCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCTTGTTCCACCACATGTaGAAAAACGACATGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFLFHHM*KNDMSI Trigger: AATGGACATGTCGTTTTTGCACATGTGGTGGAACAA...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR GCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCAGAACATTACGAACCTaGATGGCTCTTCTTTTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFRTLRT*MALLFV Trigger: AACGAAAAGAAGAGCCATGCAGGTTCGTAATGTTCT...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR GCA 90 bp | CAAAATGTTGAGCAACCATCATCGCTATCCATTTCCAGAATTTGTTCATCCCAAATAATCCCATATCTATaGATCTATACCCACCCTATA | + |
|
Preference number: 4 (lower is better) Translates to: QNVEQPSSLSISRICSSQIIPYL*IYTHPI Trigger: TATAGGGTGGGTATAGATGCATAGATATGGGATTAT...TTGGGATGAACAAATTCTGGAAATGGATAGCGATGATGGTTGCTCAACATTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR CCA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGATATGCTGCCAGTGTTaGGTTTTTCTAATGCATATG | + |
|
Preference number: 4 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWICCQC*VFLMHM Trigger: CATATGCATTAGAAAAACCCAACACTGGCAGCATAT...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR CCA 90 bp | CAAAATGTTGAGCAACCATCATCGCTATCCATTTCCAGAATTTGTTCATCCCAATACCATTTTCAGAAATaGGTTTGCAGAAGACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QNVEQPSSLSISRICSSQYHFQK*VCRRLS Trigger: AGAAAGTCTTCTGCAAACCCATTTCTGAAAATGGTA...TTGGGATGAACAAATTCTGGAAATGGATAGCGATGATGGTTGCTCAACATTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR TCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCAAAATAATGCCATCATaGGCTTTCCACTGCAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFKIMPS*AFHCKT Trigger: AGTTTTGCAGTGGAAAGCTCATGATGGCATTATTTT...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR GCA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGTGCATAGTTCAAAGATaGTTTAATGACTCTATCACG | + |
|
Preference number: 4 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWCIVQR*FNDSIT Trigger: CGTGATAGAGTCATTAAAGCATCTTTGAACTATGCA...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR GCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCTGCATAGGCTATTTCTaGAGTAGTCATATCTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFCIGYF*SSHISI Trigger: AATCGAGATATGACTACTGCAGAAATAGCCTATGCA...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR GCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCAATTTCACCAATTGCTaGATAGGCTATTTCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFNFTNC*IGYFCS Trigger: ACTGCAGAAATAGCCTATGCAGCAATTGGTGAAATT...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR CCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATATGCTGCCAGTGTTaGGTTTTTCTAATGCATATG | + |
|
Preference number: 4 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFICCQC*VFLMHM Trigger: CATATGCATTAGAAAAACCCAACACTGGCAGCATAT...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR GCA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCTGCATAGTTCAAAGATaGTTTAATGACTCTATCACG | + |
|
Preference number: 4 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFCIVQR*FNDSIT Trigger: CGTGATAGAGTCATTAAAGCATCTTTGAACTATGCA...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS CCA 90 bp | TCGAGTGAAGGACCCGGAGCCGAAACACCGGTAGGAGCGGGGAGGTaGGTACTACACAACCGTCTCCAGCCTTGGTCTGAGTGGACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSEGPGAETPVGAGR*VLHNRLQPWSEWTV Trigger: GACAGTCCACTCAGACCAAGGCTGGAGACGGTTGTGTAGTACCCACCTCCCCGCTCCTACCGGTGTTTCGGCTCCGGGTCCTTCACTCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466326.1 |
||
| CDS CCA 90 bp | CCTTGGTCTGAGTGGACTGTCCTGCAGGTAAAGTACTTCTCTTCCTaGTCAGGTTGTCACGCTCTTACTTCCTGCCTTGTCCGCGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PWSEWTVLQVKYFSS*SGCHALTSCLVRER Trigger: GCGCTCGCGGACAAGGCAGGAAGTAAGAGCGTGACAACCTGACCAGGAAGAGAAGTACTTTACCTGCAGGACAGTCCACTCAGACCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466326.1 |
||
| CDS GCA 90 bp | GTAAAGTACTTCTCTTCCTGGTCAGGTTGTCACGCTCTTACTTCCTaGCTTGTCCGCGAGCGCCTGGAAAATAGAGGCCTTGAGCCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: VKYFSSWSGCHALTS*LVRERLENRGLEPE Trigger: CTCGGGCTCAAGGCCTCTATTTTCCAGGCGCTCGCGGACAAGGCAGGAAGTAAGAGCGTGACAACCTGACCAGGAAGAGAAGTACTTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466326.1 |
||
| CDS CCA 90 bp | TACTTTATCAGGGGTGTCCAATCTTTCGGCTTCCCTAGGCCACATTaGAGGAAGAATTGTCTTGGGCCACACATAAAATACACTAACATT | + |
|
Preference number: 5 (lower is better) Translates to: YFIRGVQSFGFPRPH*RKNCLGPHIKYTNI Trigger: AATGTTAGTGTATTTTATGTGTGGCCCAAGACAATTCTTCCTCCAATGTGGCCTAGGGAAGCCGAAAGATTGGACACCCCTGATAAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478536.1 |
||
| CDS-3UTR CAA 90 bp | CAAAATGTTGAGCAACCATCATCGCTATCCATTTCCAGAATTTGTTCATCCCAACTAACGGCTTTCCGGTaGATGCCTCAAAGAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QNVEQPSSLSISRICSSQLTAFR*MPQRGR Trigger: TCTTCCTCTTTGAGGCATCAACCGGAAAGCCGTTAG...TTGGGATGAACAAATTCTGGAAATGGATAGCGATGATGGTTGCTCAACATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR CAA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCGGAAAGCGGTGGCGATaGCTCTCAAATACCTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFGKRWR*LSNTWY Trigger: GTACCAGGTATTTGAGAGCAATCGCCACCGCTTTCC...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326448.12 |
||
| CDS CCA 90 bp | AAGAATGATGATAGTGGGGCCTGTCATATCTCCTTGACACATAACTaGGGACTCTTGCTGACAAAATATAGGGTCATGTGTTTGAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: KNDDSGACHISLTHN*GLLLTKYRVMCLRK Trigger: TTTTCTCAAACACATGACCCTATATTTTGTCAGCAAGAGTCCCCAGTTATGTGTCAAGGAGATATGACAGGCCCCACTATCATCATTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487943.5 |
||
| CDS-3UTR CAA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCCTAACGGCTTTCCGGTaGATGCCTCAAAGAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFLTAFR*MPQRGR Trigger: TCTTCCTCTTTGAGGCATCAACCGGAAAGCCGTTAG...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR CAA 90 bp | CAAAATGTTGAGCAACCATCATCGCTATCCATTTCCAGAATTTGTTCATCCCAAAGTCCACAAAGGATATaGCATGTATCGTTCCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: QNVEQPSSLSISRICSSQSPQRI*HVSFHA Trigger: GGCATGGAACGATACATGCAATATCCTTTGTGGACT...TTGGGATGAACAAATTCTGGAAATGGATAGCGATGATGGTTGCTCAACATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR CAA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGACAAGCCCACATGGTTaGCTCCTTAACAAAGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWTSPHG*LLNKAT Trigger: TGTCGCTTTGTTAAGGAGCAAACCATGTGGGCTTGT...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR CAA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGGCTTTCTGCCTGGGTTaGTTTCTTTACACCCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWAFCLG*FLYTQT Trigger: AGTTTGGGTGTAAAGAAACAAACCCAGGCAGAAAGC...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR CAA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGAGTCCACAAAGGATATaGCATGTATCGTTCCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWSPQRI*HVSFHA Trigger: GGCATGGAACGATACATGCAATATCCTTTGTGGACT...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR CAA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCACAAGCCCACATGGTTaGCTCCTTAACAAAGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFTSPHG*LLNKAT Trigger: TGTCGCTTTGTTAAGGAGCAAACCATGTGGGCTTGT...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS-3UTR CAA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCGCTTTCTGCCTGGGTTaGTTTCTTTACACCCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFAFCLG*FLYTQT Trigger: AGTTTGGGTGTAAAGAAACAAACCCAGGCAGAAAGC...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
||
| CDS TCA 90 bp | TTGGGGATAAGACAAATGGCTCTTCCCTCTGTTTATTCCACAATATaGAATACCATTTTCTACCTCATCCATCTTGCAAATTCCTACTTA | + |
|
Preference number: 5 (lower is better) Translates to: LGIRQMALPSVYSTI*NTIFYLIHLANSYL Trigger: TAAGTAGGAATTTGCAAGATGGATGAGGTAGAAAATGGTATTTCATATTGTGGAATAAACAGAGGGAAGAGCCATTTGTCTTATCCCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478278.1 |
||
| CDS-3UTR CAA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGTATCAATTTCACCAATaGCTGCATAGGCTATTTCTG | + |
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Preference number: 5 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWYQFHQ*LHRLFL Trigger: CAGAAATAGCCTATGCAGCAATTGGTGAAATTGATA...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS-3UTR CAA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCTGTCTCCAAAAACTTTaGACGGTAAGCAAGAACTGT | + |
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Preference number: 5 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFCLQKL*TVSKNC Trigger: ACAGTTCTTGCTTACCGTCAAAAGTTTTTGGAGACA...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS-3UTR CAA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCTTTCTCCCAATCTATTaGGAGACCTTCTGCATAATG | + |
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Preference number: 5 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFFLPIY*ETFCIM Trigger: CATTATGCAGAAGGTCTCCAAATAGATTGGGAGAAA...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS-3UTR CAA 90 bp | AAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCTGGATCATATTTGGCCTTTaGTGTCTGGCTTATTTCACT | + |
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Preference number: 5 (lower is better) Translates to: KHIHSTTCKYTAQSDFIWIIFGL*CLAYFT Trigger: AGTGAAATAAGCCAGACACAAAAGGCCAAATATGAT...CCAGATGAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS TCA 90 bp | AAAATATTATTAATTGCCACCTTCCCATGTGAAATAATGAGGATCTaGCTGCTCAGATTTCCCCAACTTGTCCTTCACTTTATCATGAAT | + |
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Preference number: 5 (lower is better) Translates to: KILLIATFPCEIMRI*LLRFPQLVLHFIMN Trigger: ATTCATGATAAAGTGAAGGACAAGTTGGGGAAATCTGAGCAGTCAGATCCTCATTATTTCACATGGGAAGGTGGCAATTAATAATATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487943.5 |
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| CDS-3UTR CAA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCTATCAATTTCACCAATaGCTGCATAGGCTATTTCTG | + |
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Preference number: 5 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFYQFHQ*LHRLFL Trigger: CAGAAATAGCCTATGCAGCAATTGGTGAAATTGATA...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS-3UTR CAA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATTCATGATAGACACTaGAGCTGTTTCCATCTTTTG | + |
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Preference number: 5 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFIHDRH*SCFHLL Trigger: CAAAAGATGGAAACAGCTCAAGTGTCTATCATGAAT...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS-3UTR CAA 90 bp | TATAGGAAACACATACACAGTACAACTTGTAAGTACACTGCTCAATCAGATTTCATCCATTTCCAGAATTaGTTCATCCCAAACAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: YRKHIHSTTCKYTAQSDFIHFQN*FIPNRN Trigger: GTTTCTGTTTGGGATGAACAAATTCTGGAAATGGAT...GAAATCTGATTGAGCAGTGTACTTACAAGTTGTACTGTGTATGTGTTTCCTATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326448.12 ENST00000483465.5 |
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| CDS CCA 72 bp | GGACCCGGAGCCGAAACACCGGTAGGAGCGGGGAGGTaGGTACTACACAACCGTCTCCAGCCTTGGTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: GPGAETPVGAGR*VLHNRLQPWSE Trigger: CTCAGACCAAGGCTGGAGACGGTTGTGTAGTACCCACCTCCCCGCTCCTACCGGTGTTTCGGCTCCGGGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466326.1 |
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| CDS CCA 72 bp | GTCACGCTCTTACTTCCTGCCTTGTCCGCGAGCGCCTaGAAAATAGAGGCCTTGAGCCCGAGCGGCGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: VTLLLPALSASA*KIEALSPSGEV Trigger: GACTTCGCCGCTCGGGCTCAAGGCCTCTATTTTCCAGGCGCTCGCGGACAAGGCAGGAAGTAAGAGCGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466326.1 |
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| CDS CAA 90 bp | AGTACTTCTCTTCCTGGTCAGGTTGTCACGCTCTTACTTCCTGCCTaGTCCGCGAGCGCCTGGAAAATAGAGGCCTTGAGCCCGAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: STSLPGQVVTLLLPA*SASAWKIEALSPSG Trigger: GCCGCTCGGGCTCAAGGCCTCTATTTTCCAGGCGCTCGCGGACAAGGCAGGAAGTAAGAGCGTGACAACCTGACCAGGAAGAGAAGTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466326.1 |
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| CDS TCA 72 bp | TCCGTTCGAGTTTGTATTTTAGGCGCCATTTTCGAGTaGAGGACCCGGAGCCGAAACACCGGTAGGAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: SVRVCILGAIFE*RTRSRNTGRSG Trigger: CCCGCTCCTACCGGTGTTTCGGCTCCGGGTCCTTCACTCGAAAATGGCGCCTAAAATACAAACTCGAACGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466326.1 |
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| CDS CCA 72 bp | AGGGGTGTCCAATCTTTCGGCTTCCCTAGGCCACATTaGAGGAAGAATTGTCTTGGGCCACACATAAAATAC | + |
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Preference number: 6 (lower is better) Translates to: RGVQSFGFPRPH*RKNCLGPHIKY Trigger: GTATTTTATGTGTGGCCCAAGACAATTCTTCCTCCAATGTGGCCTAGGGAAGCCGAAAGATTGGACACCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478536.1 |
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| CDS CAA 90 bp | TCCCAGAAATCATTGCGCGCATTTGTAACGAATTTCCGTTCGAGTTaGTATTTTAGGCGCCATTTTCGAGTGAAGGACCCGGAGCCGAAA | + |
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Preference number: 6 (lower is better) Translates to: SQKSLRAFVTNFRSS*YFRRHFRVKDPEPK Trigger: TTTCGGCTCCGGGTCCTTCACTCGAAAATGGCGCCTAAAATACAAACTCGAACGGAAATTCGTTACAAATGCGCGCAATGATTTCTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466326.1 |
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| CDS CCA 72 bp | GATAGTGGGGCCTGTCATATCTCCTTGACACATAACTaGGGACTCTTGCTGACAAAATATAGGGTCATGTGT | + |
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Preference number: 6 (lower is better) Translates to: DSGACHISLTHN*GLLLTKYRVMC Trigger: ACACATGACCCTATATTTTGTCAGCAAGAGTCCCCAGTTATGTGTCAAGGAGATATGACAGGCCCCACTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487943.5 |
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| CDS CAA 72 bp | TCATTGCGCGCATTTGTAACGAATTTCCGTTCGAGTTaGTATTTTAGGCGCCATTTTCGAGTGAAGGACCCG | + |
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Preference number: 6 (lower is better) Translates to: SLRAFVTNFRSS*YFRRHFRVKDP Trigger: CGGGTCCTTCACTCGAAAATGGCGCCTAAAATACAAACTCGAACGGAAATTCGTTACAAATGCGCGCAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466326.1 |
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| CDS CAA 72 bp | TTTGTGTCAGACTCCATGAGTAGTAGAGTTCTGGAGTaGGGGATAAGACAAATGGCTCTTCCCTCTGTTTAT | + |
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Preference number: 6 (lower is better) Translates to: FVSDSMSSRVLE*GIRQMALPSVY Trigger: ATAAACAGAGGGAAGAGCCATTTGTCTTATCCCCAACTCCAGAACTCTACTACTCATGGAGTCTGACACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478278.1 |
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| CDS TCA 72 bp | TTAATTGCCACCTTCCCATGTGAAATAATGAGGATCTaGCTGCTCAGATTTCCCCAACTTGTCCTTCACTTT | + |
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Preference number: 6 (lower is better) Translates to: LIATFPCEIMRI*LLRFPQLVLHF Trigger: AAAGTGAAGGACAAGTTGGGGAAATCTGAGCAGTCAGATCCTCATTATTTCACATGGGAAGGTGGCAATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487943.5 |
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| CDS CAA 72 bp | GCCTGTCATATCTCCTTGACACATAACTGGGGACTCTaGCTGACAAAATATAGGGTCATGTGTTTGAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: ACHISLTHNWGL*LTKYRVMCLRK Trigger: TTTTCTCAAACACATGACCCTATATTTTGTCAGCAAGAGTCCCCAGTTATGTGTCAAGGAGATATGACAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487943.5 |
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| CDS CAA 90 bp | TTAACATTGTTTGTGTCAGACTCCATGAGTAGTAGAGTTCTGGAGTaGGGGATAAGACAAATGGCTCTTCCCTCTGTTTATTCCACAATA | + |
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Preference number: 6 (lower is better) Translates to: LTLFVSDSMSSRVLE*GIRQMALPSVYSTI Trigger: TATTGTGGAATAAACAGAGGGAAGAGCCATTTGTCTTATCCCCAACTCCAGAACTCTACTACTCATGGAGTCTGACACAAACAATGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478278.1 |
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| CDS GCA 72 bp | CACAATATGAAATACCATTTTCTACCTCATCCATCTTaGAAATTCCTACTTATATACTTCAGGGCCCAGATC | + |
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Preference number: 6 (lower is better) Translates to: HNMKYHFLPHPS*KFLLIYFRAQI Trigger: GATCTGGGCCCTGAAGTATATAAGTAGGAATTTGCAAGATGGATGAGGTAGAAAATGGTATTTCATATTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478278.1 |
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| CDS TCA 72 bp | AGACAAATGGCTCTTCCCTCTGTTTATTCCACAATATaGAATACCATTTTCTACCTCATCCATCTTGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: RQMALPSVYSTI*NTIFYLIHLAN Trigger: ATTTGCAAGATGGATGAGGTAGAAAATGGTATTTCATATTGTGGAATAAACAGAGGGAAGAGCCATTTGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478278.1 |
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