Pregenerated sensors for IFT57 (Homo sapiens)
Ensembl gene IDs: ENSG00000114446Ensembl transcript IDs: ENST00000264538.4, ENST00000465024.1, ENST00000468021.1, ENST00000478157.1, ENST00000485979.1, ENST00000492106.1
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGAGGTGGAGCAAGGTAAAGGACTGTGTCAGCAGTTCATGTTGTaGCAGCAGCAGCATCTGCAGAAAACGCAGGTCATATACCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: AEVEQGKGLCQQFML*QQQHLQKTQVIYLG Trigger: GCCAAGGTATATGACCTGCGTTTTCTGCAGATGCTGCTGCTGTCACAACATGAACTGCTGACACAGTCCTTTACCTTGCTCCACCTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| 3UTR TCA 90 bp | AATCCTGCCTACCATCTTCAGTGGCCTCTGGGCACAAAGCACTTATaGTCACTGCAGAGGTGGAGCAAGGTAAAGGACTGTGTCAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: NPAYHLQWPLGTKHL*SLQRWSKVKDCVSS Trigger: ACTGCTGACACAGTCCTTTACCTTGCTCCACCTCTGCAGTGATCATAAGTGCTTTGTGCCCAGAGGCCACTGAAGATGGTAGGCAGGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| 3UTR GCA 90 bp | TGGATTCTCCAATCCTTATTGTCAGTCCTAATCGTGACTTTCAGTTaGGGTAGTACACGTTCCACTTCTAGGCTCCATTCTGCAGCATCT | + |
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Preference number: 1 (lower is better) Translates to: WILQSLLSVLIVTFS*GSTRSTSRLHSAAS Trigger: AGATGCTGCAGAATGGAGCCTAGAAGTGGAACGTGTACTACCGCAACTGAAAGTCACGATTAGGACTGACAATAAGGATTGGAGAATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| 3UTR CAA 90 bp | TGTTGTGACAGCAGCAGCATCTGCAGAAAACGCAGGTCATATACCTaGGCTTACACAAGGAATGCTATGAAAAATGAGCCACCAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: CCDSSSICRKRRSYT*AYTRNAMKNEPPGG Trigger: CCCACCTGGTGGCTCATTTTTCATAGCATTCCTTGTGTAAGCCAAGGTATATGACCTGCGTTTTCTGCAGATGCTGCTGCTGTCACAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| 3UTR CAA 90 bp | GCGGTAGTACACGTTCCACTTCTAGGCTCCATTCTGCAGCATCTGTaGTGGATTCCAAAATATCTTCTTGTTTGGCAGTCTCGTTCATAT | + |
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Preference number: 2 (lower is better) Translates to: AVVHVPLLGSILQHL*WIPKYLLVWQSRSY Trigger: ATATGAACGAGACTGCCAAACAAGAAGATATTTTGGAATCCACAACAGATGCTGCAGAATGGAGCCTAGAAGTGGAACGTGTACTACCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| 3UTR-3UTR TCA 90 bp | GTCATCGTTCCTTCTTCTACAAAATGGTTCCCTAGTATAGCCGATACCACAGAAACACAAGGAATGCTATaGAAAATGAGCCACCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: VIVPSSTKWFPSIADTTETQGML*KMSHQV Trigger: CACCTGGTGGCTCATTTTTCATAGCATTCCTTGTGT...TTCTGTGGTATCGGCTATACTAGGGAACCATTTTGTAGAAGAAGGAACGATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| 3UTR-3UTR GCA 90 bp | GTACACGTTCCACTTCTAGGCTCCATTCTGCAGCATCTGTTGTGGATTCCAAAAACCAATATATTTCAATaGTTCTTCAGCGAAGCAATC | + |
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Preference number: 2 (lower is better) Translates to: VHVPLLGSILQHLLWIPKTNIFQ*FFSEAI Trigger: GATTGCTTCGCTGAAGAAGCATTGAAATATATTGGT...TTTTGGAATCCACAACAGATGCTGCAGAATGGAGCCTAGAAGTGGAACGTGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| 3UTR-3UTR CCA 90 bp | ATTCTGCAGCATCTGTTGTGGATTCCAAAATATCTTCTTGTTTGGCAGTCTCGTTTCTACTGGGTATATTaGCCTTTTCCAGGTGAAACC | + |
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Preference number: 2 (lower is better) Translates to: ILQHLLWIPKYLLVWQSRFYWVY*PFPGET Trigger: GGTTTCACCTGGAAAAGGCCAATATACCCAGTAGAA...ACGAGACTGCCAAACAAGAAGATATTTTGGAATCCACAACAGATGCTGCAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| 3UTR TCA 72 bp | TACCATCTTCAGTGGCCTCTGGGCACAAAGCACTTATaGTCACTGCAGAGGTGGAGCAAGGTAAAGGACTGT | + |
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Preference number: 3 (lower is better) Translates to: YHLQWPLGTKHL*SLQRWSKVKDC Trigger: ACAGTCCTTTACCTTGCTCCACCTCTGCAGTGATCATAAGTGCTTTGTGCCCAGAGGCCACTGAAGATGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| 3UTR GCA 72 bp | CAATCCTTATTGTCAGTCCTAATCGTGACTTTCAGTTaGGGTAGTACACGTTCCACTTCTAGGCTCCATTCT | + |
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Preference number: 3 (lower is better) Translates to: QSLLSVLIVTFS*GSTRSTSRLHS Trigger: AGAATGGAGCCTAGAAGTGGAACGTGTACTACCGCAACTGAAAGTCACGATTAGGACTGACAATAAGGATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| 3UTR CCA 72 bp | TTCATGCGACCTGTCATCGTTCCTTCTTCTACAAAATaGTTCCCTAGTATAGCCGATACCACAGAAAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: FMRPVIVPSSTK*FPSIADTTEKG Trigger: ACCTTTTTCTGTGGTATCGGCTATACTAGGGAACCATTTTGTAGAAGAAGGAACGATGACAGGTCGCATGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| 3UTR CCA 72 bp | CAGCATCTGTTGTGGATTCCAAAATATCTTCTTGTTTaGCAGTCTCGTTCATATCCAAGTGATATGTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: QHLLWIPKYLLV*QSRSYPSDMSG Trigger: CCCAGACATATCACTTGGATATGAACGAGACTGCCAAACAAGAAGATATTTTGGAATCCACAACAGATGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS-3UTR TCA 90 bp | TGTGACAGCAGCAGCATCTGCAGAAAACGCAGGTCATATACCTTGGCTTACACACCAAACCCGACGTCGTaGCGACGGCCAGAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: CDSSSICRKRRSYTLAYTPNPTS*RRPEQQ Trigger: CTGCTGCTCTGGCCGTCGTCACGACGTCGGGTTTGG...TGTGTAAGCCAAGGTATATGACCTGCGTTTTCTGCAGATGCTGCTGCTGTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR TCA 90 bp | CACGTTCCACTTCTAGGCTCCATTCTGCAGCATCTGTTGTGGATTCCAAAATATCCAAACCCGACGTCGTaGCGACGGCCAGAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: HVPLLGSILQHLLWIPKYPNPTS*RRPEQQ Trigger: CTGCTGCTCTGGCCGTCGTCACGACGTCGGGTTTGG...ATATTTTGGAATCCACAACAGATGCTGCAGAATGGAGCCTAGAAGTGGAACGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS-3UTR GCA 90 bp | GTTCCACTTCTAGGCTCCATTCTGCAGCATCTGTTGTGGATTCCAAAATATCTTAGGCCCACAGACCTCTaGGGCCTAAGCCGCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: VPLLGSILQHLLWIPKYLRPTDL*GLSRQP Trigger: GGGCTGGCGGCTTAGGCCGCAGAGGTCTGTGGGCCT...AAGATATTTTGGAATCCACAACAGATGCTGCAGAATGGAGCCTAGAAGTGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS-3UTR GCA 90 bp | AAACGCAGGTCATATACCTTGGCTTACACAAGGAATGCTATGAAAAATGAGCCACTAAGCCGCCAGCCCTaGCGCCGCCAGTACAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: KRRSYTLAYTRNAMKNEPLSRQP*RRQYSH Trigger: GTGGCTGTACTGGCGGCGGCAGGGCTGGCGGCTTAG...TGGCTCATTTTTCATAGCATTCCTTGTGTAAGCCAAGGTATATGACCTGCGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR GCA 90 bp | AAACGCAGGTCATATACCTTGGCTTACACAAGGAATGCTATGAAAAATGAGCCAAGGCCCACAGACCTCTaGGGCCTAAGCCGCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: KRRSYTLAYTRNAMKNEPRPTDL*GLSRQP Trigger: GGGCTGGCGGCTTAGGCCGCAGAGGTCTGTGGGCCT...TGGCTCATTTTTCATAGCATTCCTTGTGTAAGCCAAGGTATATGACCTGCGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR GCA 90 bp | GCAGCAGCATCTGCAGAAAACGCAGGTCATATACCTTGGCTTACACAAGGAATGACGGGGCCTTCAGGTTaGTCTTCCGGAGGAACTCCT | + |
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Preference number: 4 (lower is better) Translates to: AAASAENAGHIPWLTQGMTGPSG*SSGGTP Trigger: AGGAGTTCCTCCGGAAGAGCAACCTGAAGGCCCCGT...CATTCCTTGTGTAAGCCAAGGTATATGACCTGCGTTTTCTGCAGATGCTGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR TCA 90 bp | AGGTGGAGCAAGGTAAAGGACTGTGTCAGCAGTTCATGTTGTGACAGCAGCAGCGAATGCTATGAAAAATaGGCCACCAGGTGGGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: RWSKVKDCVSSSCCDSSSECYEK*ATRWEL Trigger: AAGCTCCCACCTGGTGGCTCATTTTTCATAGCATTC...GCTGCTGCTGTCACAACATGAACTGCTGACACAGTCCTTTACCTTGCTCCACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR GCA 90 bp | TTCCAAAATATCTTCTTGTTTGGCAGTCTCGTTCATATCCAAGTGATATGTCTGCTAAGCCGCCAGCCCTaGCGCCGCCAGTACAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: FQNIFLFGSLVHIQVICLLSRQP*RRQYSH Trigger: GTGGCTGTACTGGCGGCGGCAGGGCTGGCGGCTTAG...CAGACATATCACTTGGATATGAACGAGACTGCCAAACAAGAAGATATTTTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS-3UTR CCA 90 bp | TGTGACAGCAGCAGCATCTGCAGAAAACGCAGGTCATATACCTTGGCTTACACACCTCCATTTCCCTGCTaGTATCGCTCCTTTGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: CDSSSICRKRRSYTLAYTPPFPC*YRSFAS Trigger: TGAGGCAAAGGAGCGATACCAGCAGGGAAATGGAGG...TGTGTAAGCCAAGGTATATGACCTGCGTTTTCTGCAGATGCTGCTGCTGTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR TCA 90 bp | GCAGCAGCATCTGCAGAAAACGCAGGTCATATACCTTGGCTTACACAAGGAATGGGGTCATCATATTCTTaGGGCTGCTCAAAGGGACGT | + |
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Preference number: 4 (lower is better) Translates to: AAASAENAGHIPWLTQGMGSSYS*GCSKGR Trigger: ACGTCCCTTTGAGCAGCCTCAAGAATATGATGACCC...CATTCCTTGTGTAAGCCAAGGTATATGACCTGCGTTTTCTGCAGATGCTGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR TCA 90 bp | AGGTGGAGCAAGGTAAAGGACTGTGTCAGCAGTTCATGTTGTGACAGCAGCAGCACACAAGGAATGCTATaGAAAATGAGCCACCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: RWSKVKDCVSSSCCDSSSTQGML*KMSHQV Trigger: CACCTGGTGGCTCATTTTTCATAGCATTCCTTGTGT...GCTGCTGCTGTCACAACATGAACTGCTGACACAGTCCTTTACCTTGCTCCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR GCA 90 bp | GTCATCGTTCCTTCTTCTACAAAATGGTTCCCTAGTATAGCCGATACCACAGAAACGCAGGCTGTCTCCTaGTTTGTGTTCCCCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: VIVPSSTKWFPSIADTTETQAVS*FVFPWP Trigger: TGGCCAGGGGAACACAAAGCAGGAGACAGCCTGCGT...TTCTGTGGTATCGGCTATACTAGGGAACCATTTTGTAGAAGAAGGAACGATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR TCA 90 bp | AGGTGGAGCAAGGTAAAGGACTGTGTCAGCAGTTCATGTTGTGACAGCAGCAGCGCACAGAACCCAAGCTaGGTTAACTGGAATATTTCA | + |
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Preference number: 4 (lower is better) Translates to: RWSKVKDCVSSSCCDSSSAQNPS*VNWNIS Trigger: TGAAATATTCCAGTTAACTCAGCTTGGGTTCTGTGC...GCTGCTGCTGTCACAACATGAACTGCTGACACAGTCCTTTACCTTGCTCCACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR GCA 90 bp | GTCATCGTTCCTTCTTCTACAAAATGGTTCCCTAGTATAGCCGATACCACAGAACTGGTATCGCTCCTTTaGCTCACTCAGCTGGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: VIVPSSTKWFPSIADTTELVSLL*LTQLGL Trigger: CAAGCCCAGCTGAGTGAGGCAAAGGAGCGATACCAG...TTCTGTGGTATCGGCTATACTAGGGAACCATTTTGTAGAAGAAGGAACGATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CCA 90 bp | AGGTGGAGCAAGGTAAAGGACTGTGTCAGCAGTTCATGTTGTGACAGCAGCAGCTTCTACTGGGTATATTaGCCTTTTCCAGGTGAAACC | + |
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Preference number: 4 (lower is better) Translates to: RWSKVKDCVSSSCCDSSSFYWVY*PFPGET Trigger: GGTTTCACCTGGAAAAGGCCAATATACCCAGTAGAA...GCTGCTGCTGTCACAACATGAACTGCTGACACAGTCCTTTACCTTGCTCCACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CCA 90 bp | GCAGCAGCATCTGCAGAAAACGCAGGTCATATACCTTGGCTTACACAAGGAATGGGCAGTTTGGGTTCTTaGAAAGAATCCTGCCTACCA | + |
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Preference number: 4 (lower is better) Translates to: AAASAENAGHIPWLTQGMGSLGS*KESCLP Trigger: TGGTAGGCAGGATTCTTTCCAAGAACCCAAACTGCC...CATTCCTTGTGTAAGCCAAGGTATATGACCTGCGTTTTCTGCAGATGCTGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR TCA 90 bp | AGGTGGAGCAAGGTAAAGGACTGTGTCAGCAGTTCATGTTGTGACAGCAGCAGCTCGTTCATATCCAAGTaGTATGTCTGGGCCTTTAAA | + |
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Preference number: 4 (lower is better) Translates to: RWSKVKDCVSSSCCDSSSSFISK*YVWAFK Trigger: TTTAAAGGCCCAGACATATCACTTGGATATGAACGA...GCTGCTGCTGTCACAACATGAACTGCTGACACAGTCCTTTACCTTGCTCCACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR TCA 90 bp | GCAGCAGCATCTGCAGAAAACGCAGGTCATATACCTTGGCTTACACAAGGAATGTCTCAAGCTGATTGTTaGTGTACTTTTCTCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: AAASAENAGHIPWLTQGMSQADC*CTFLGC Trigger: GCAGCCGAGAAAAGTACATCAACAATCAGCTTGAGA...CATTCCTTGTGTAAGCCAAGGTATATGACCTGCGTTTTCTGCAGATGCTGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR GCA 90 bp | GCAGCAGCATCTGCAGAAAACGCAGGTCATATACCTTGGCTTACACAAGGAATGATCGTGACTTTCAGTTaGGGTAGTACACGTTCCACT | + |
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Preference number: 4 (lower is better) Translates to: AAASAENAGHIPWLTQGMIVTFS*GSTRST Trigger: AGTGGAACGTGTACTACCGCAACTGAAAGTCACGAT...CATTCCTTGTGTAAGCCAAGGTATATGACCTGCGTTTTCTGCAGATGCTGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CCA 90 bp | GTCATCGTTCCTTCTTCTACAAAATGGTTCCCTAGTATAGCCGATACCACAGAAGTGCAAAATAGTGTCTaGACGGGGCCTTCAGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: VIVPSSTKWFPSIADTTEVQNSV*TGPSGC Trigger: GCAACCTGAAGGCCCCGTCCAGACACTATTTTGCAC...TTCTGTGGTATCGGCTATACTAGGGAACCATTTTGTAGAAGAAGGAACGATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CCA 90 bp | AAACGCAGGTCATATACCTTGGCTTACACAAGGAATGCTATGAAAAATGAGCCAGCCTACCATCTTCAGTaGCCTCTGGGCACAAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: KRRSYTLAYTRNAMKNEPAYHLQ*PLGTKH Trigger: GTGCTTTGTGCCCAGAGGCCACTGAAGATGGTAGGC...TGGCTCATTTTTCATAGCATTCCTTGTGTAAGCCAAGGTATATGACCTGCGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR GCA 90 bp | GTCATCGTTCCTTCTTCTACAAAATGGTTCCCTAGTATAGCCGATACCACAGAAAGGGTTGGTAGGCAGTaGAAAATAGTGTCTGGACGG | + |
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Preference number: 4 (lower is better) Translates to: VIVPSSTKWFPSIADTTERVGRQ*KIVSGR Trigger: CCGTCCAGACACTATTTTGCACTGCCTACCAACCCT...TTCTGTGGTATCGGCTATACTAGGGAACCATTTTGTAGAAGAAGGAACGATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR GCA 90 bp | GTACACGTTCCACTTCTAGGCTCCATTCTGCAGCATCTGTTGTGGATTCCAAAAATCGTGACTTTCAGTTaGGGTAGTACACGTTCCACT | + |
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Preference number: 4 (lower is better) Translates to: VHVPLLGSILQHLLWIPKIVTFS*GSTRST Trigger: AGTGGAACGTGTACTACCGCAACTGAAAGTCACGAT...TTTTGGAATCCACAACAGATGCTGCAGAATGGAGCCTAGAAGTGGAACGTGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS-3UTR CCA 90 bp | GTGACTTTCAGTTGCGGTAGTACACGTTCCACTTCTAGGCTCCATTCTGCAGCATGTCCAAAAATCCCTTaGTCTCCTTTAGAGCAGATT | + |
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Preference number: 4 (lower is better) Translates to: VTFSCGSTRSTSRLHSAACPKIP*SPLEQI Trigger: AATCTGCTCTAAAGGAGACCAAGGGATTTTTGGACA...TGCTGCAGAATGGAGCCTAGAAGTGGAACGTGTACTACCGCAACTGAAAGTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS-3UTR CCA 90 bp | GCAGCAGCATCTGCAGAAAACGCAGGTCATATACCTTGGCTTACACAAGGAATGATAAAAGCCTGTTGCTaGTTCTGGAATAACTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: AAASAENAGHIPWLTQGMIKACC*FWNNCG Trigger: GCCACAGTTATTCCAGAACCAGCAACAGGCTTTTAT...CATTCCTTGTGTAAGCCAAGGTATATGACCTGCGTTTTCTGCAGATGCTGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CCA 90 bp | GCAGCAGCATCTGCAGAAAACGCAGGTCATATACCTTGGCTTACACAAGGAATGGCAGGTCATATACCTTaGCTTACACAAGGAATGCTA | + |
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Preference number: 4 (lower is better) Translates to: AAASAENAGHIPWLTQGMAGHIP*LTQGML Trigger: TAGCATTCCTTGTGTAAGCCAAGGTATATGACCTGC...CATTCCTTGTGTAAGCCAAGGTATATGACCTGCGTTTTCTGCAGATGCTGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CCA 90 bp | GGGCACAAAGCACTTATGATCACTGCAGAGGTGGAGCAAGGTAAAGGACTGTGTCCTTCTTCTACAAAATaGTTCCCTAGTATAGCCGAT | + |
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Preference number: 4 (lower is better) Translates to: GHKALMITAEVEQGKGLCPSSTK*FPSIAD Trigger: ATCGGCTATACTAGGGAACCATTTTGTAGAAGAAGG...ACACAGTCCTTTACCTTGCTCCACCTCTGCAGTGATCATAAGTGCTTTGTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CCA 90 bp | TTCCAAAATATCTTCTTGTTTGGCAGTCTCGTTCATATCCAAGTGATATGTCTGTCTGCAGTTCTTCCCTaGACGGGGCCTTCAGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: FQNIFLFGSLVHIQVICLSAVLP*TGPSGC Trigger: GCAACCTGAAGGCCCCGTCCAGGGAAGAACTGCAGA...CAGACATATCACTTGGATATGAACGAGACTGCCAAACAAGAAGATATTTTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS-3UTR GCA 90 bp | AGGTGGAGCAAGGTAAAGGACTGTGTCAGCAGTTCATGTTGTGACAGCAGCAGCTTAATAAAAGCCTGTTaGTGGTTCTGGAATAACTGT | + |
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Preference number: 4 (lower is better) Translates to: RWSKVKDCVSSSCCDSSSLIKAC*WFWNNC Trigger: ACAGTTATTCCAGAACCAGCAACAGGCTTTTATTAA...GCTGCTGCTGTCACAACATGAACTGCTGACACAGTCCTTTACCTTGCTCCACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CCA 90 bp | ATCGTTCCTTCTTCTACAAAATGGTTCCCTAGTATAGCCGATACCACAGAAAAACCTCAGAGAGGAGTCTaGTTCTTTCCGTCACTCCTC | + |
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Preference number: 4 (lower is better) Translates to: IVPSSTKWFPSIADTTEKPQRGV*FFPSLL Trigger: GAGGAGTGACGGAAAGAACCAGACTCCTCTCTGAGG...TTTTTCTGTGGTATCGGCTATACTAGGGAACCATTTTGTAGAAGAAGGAACGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| 3UTR CAA 72 bp | CACGTTCCACTTCTAGGCTCCATTCTGCAGCATCTGTaGTGGATTCCAAAATATCTTCTTGTTTGGCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: HVPLLGSILQHL*WIPKYLLVWQS Trigger: AGACTGCCAAACAAGAAGATATTTTGGAATCCACAACAGATGCTGCAGAATGGAGCCTAGAAGTGGAACGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS-3UTR GCA 90 bp | GGGCACAAAGCACTTATGATCACTGCAGAGGTGGAGCAAGGTAAAGGACTGTGTACCAATATATTTCAATaGTTCTTCAGCGAAGCAATC | + |
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Preference number: 4 (lower is better) Translates to: GHKALMITAEVEQGKGLCTNIFQ*FFSEAI Trigger: GATTGCTTCGCTGAAGAAGCATTGAAATATATTGGT...ACACAGTCCTTTACCTTGCTCCACCTCTGCAGTGATCATAAGTGCTTTGTGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR GCA 90 bp | TCAGTTGCGGTAGTACACGTTCCACTTCTAGGCTCCATTCTGCAGCATCTGTTGACCAATATATTTCAATaGTTCTTCAGCGAAGCAATC | + |
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Preference number: 4 (lower is better) Translates to: SVAVVHVPLLGSILQHLLTNIFQ*FFSEAI Trigger: GATTGCTTCGCTGAAGAAGCATTGAAATATATTGGT...CAACAGATGCTGCAGAATGGAGCCTAGAAGTGGAACGTGTACTACCGCAACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS-3UTR GCA 90 bp | AAACGCAGGTCATATACCTTGGCTTACACAAGGAATGCTATGAAAAATGAGCCATCTTGGAAAGAATCCTaGCTACCATCTTCAGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: KRRSYTLAYTRNAMKNEPSWKES*LPSSVA Trigger: GGCCACTGAAGATGGTAGGCAGGATTCTTTCCAAGA...TGGCTCATTTTTCATAGCATTCCTTGTGTAAGCCAAGGTATATGACCTGCGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CCA 90 bp | CACGTTCCACTTCTAGGCTCCATTCTGCAGCATCTGTTGTGGATTCCAAAATATTTCTACTGGGTATATTaGCCTTTTCCAGGTGAAACC | + |
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Preference number: 4 (lower is better) Translates to: HVPLLGSILQHLLWIPKYFYWVY*PFPGET Trigger: GGTTTCACCTGGAAAAGGCCAATATACCCAGTAGAA...ATATTTTGGAATCCACAACAGATGCTGCAGAATGGAGCCTAGAAGTGGAACGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS-3UTR TCA 90 bp | TCTGTTGTGGATTCCAAAATATCTTCTTGTTTGGCAGTCTCGTTCATATCCAAGTCTCAAGCTGATTGTTaGTGTACTTTTCTCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVVDSKISSCLAVSFISKSQADC*CTFLGC Trigger: GCAGCCGAGAAAAGTACATCAACAATCAGCTTGAGA...CTTGGATATGAACGAGACTGCCAAACAAGAAGATATTTTGGAATCCACAACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS-3UTR TCA 90 bp | GTCATCGTTCCTTCTTCTACAAAATGGTTCCCTAGTATAGCCGATACCACAGAAGAACAGAGTCAAACATaGGTGACTGACTTATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VIVPSSTKWFPSIADTTEEQSQT*VTDLSS Trigger: TGATGATAAGTCAGTCACTCATGTTTGACTCTGTTC...TTCTGTGGTATCGGCTATACTAGGGAACCATTTTGTAGAAGAAGGAACGATGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR GCA 90 bp | AAACGCAGGTCATATACCTTGGCTTACACAAGGAATGCTATGAAAAATGAGCCAGGAATAACTGTGGCATaGATGTTCCTAGTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRRSYTLAYTRNAMKNEPGITVA*MFLVML Trigger: CAACATGACTAGGAACATGCATGCCACAGTTATTCC...TGGCTCATTTTTCATAGCATTCCTTGTGTAAGCCAAGGTATATGACCTGCGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CCA 90 bp | GTCATCGTTCCTTCTTCTACAAAATGGTTCCCTAGTATAGCCGATACCACAGAATGTCCAAAAATCCCTTaGTCTCCTTTAGAGCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: VIVPSSTKWFPSIADTTECPKIP*SPLEQI Trigger: AATCTGCTCTAAAGGAGACCAAGGGATTTTTGGACA...TTCTGTGGTATCGGCTATACTAGGGAACCATTTTGTAGAAGAAGGAACGATGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR TCA 90 bp | TTCTGCAGCATCTGTTGTGGATTCCAAAATATCTTCTTGTTTGGCAGTCTCGTTTCGTTCATATCCAAGTaGTATGTCTGGGCCTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FCSICCGFQNIFLFGSLVSFISK*YVWAFK Trigger: TTTAAAGGCCCAGACATATCACTTGGATATGAACGA...AACGAGACTGCCAAACAAGAAGATATTTTGGAATCCACAACAGATGCTGCAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS-3UTR TCA 90 bp | ATCGTTCCTTCTTCTACAAAATGGTTCCCTAGTATAGCCGATACCACAGAAAAAAAAGATCTGTGTATGTaGGCATGTTGGGGAATACAT | + |
|
Preference number: 4 (lower is better) Translates to: IVPSSTKWFPSIADTTEKKDLCM*ACWGIH Trigger: ATGTATTCCCCAACATGCTCACATACACAGATCTTT...TTTTTCTGTGGTATCGGCTATACTAGGGAACCATTTTGTAGAAGAAGGAACGAT 39% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CCA 90 bp | AAACGCAGGTCATATACCTTGGCTTACACAAGGAATGCTATGAAAAATGAGCCAATGCTTATTTTCCCATaGTGGGTTTTCTGCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KRRSYTLAYTRNAMKNEPMLIFP*WVFCLF Trigger: AAAAAGGCAGAAAACCCACCATGGGAAAATAAGCAT...TGGCTCATTTTTCATAGCATTCCTTGTGTAAGCCAAGGTATATGACCTGCGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CCA 90 bp | GTCATCGTTCCTTCTTCTACAAAATGGTTCCCTAGTATAGCCGATACCACAGAAGGAAGTAAAAATAGGTaGCTTATACTACTCATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VIVPSSTKWFPSIADTTEGSKNR*LILLIA Trigger: TGCAATGAGTAGTATAAGCCACCTATTTTTACTTCC...TTCTGTGGTATCGGCTATACTAGGGAACCATTTTGTAGAAGAAGGAACGATGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR TCA 90 bp | ATCGTTCCTTCTTCTACAAAATGGTTCCCTAGTATAGCCGATACCACAGAAAAAAGAGTCAAACATGAGTaGCTGACTTATCATCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: IVPSSTKWFPSIADTTEKRVKHE*LTYHHS Trigger: TGAATGATGATAAGTCAGTCACTCATGTTTGACTCT...TTTTTCTGTGGTATCGGCTATACTAGGGAACCATTTTGTAGAAGAAGGAACGAT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR TCA 90 bp | ATCGTTCCTTCTTCTACAAAATGGTTCCCTAGTATAGCCGATACCACAGAAAAAGAAAAAGGTAGAAATTaGGACATGCATATGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: IVPSSTKWFPSIADTTEKEKGRN*DMHMHL Trigger: AAGGTGCATATGCATGTCTCAATTTCTACCTTTTTC...TTTTTCTGTGGTATCGGCTATACTAGGGAACCATTTTGTAGAAGAAGGAACGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CCA 90 bp | AAACGCAGGTCATATACCTTGGCTTACACAAGGAATGCTATGAAAAATGAGCCAAAATATCTTCTTGTTTaGCAGTCTCGTTCATATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRRSYTLAYTRNAMKNEPKYLLV*QSRSYP Trigger: TGGATATGAACGAGACTGCCAAACAAGAAGATATTT...TGGCTCATTTTTCATAGCATTCCTTGTGTAAGCCAAGGTATATGACCTGCGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CCA 90 bp | TCTGTTGTGGATTCCAAAATATCTTCTTGTTTGGCAGTCTCGTTCATATCCAAGAAATATCTTCTTGTTTaGCAGTCTCGTTCATATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVVDSKISSCLAVSFISKKYLLV*QSRSYP Trigger: TGGATATGAACGAGACTGCCAAACAAGAAGATATTT...CTTGGATATGAACGAGACTGCCAAACAAGAAGATATTTTGGAATCCACAACAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS GCA 90 bp | CGTGGGCTCAGGCCCACAGACCTCTGCGGCCTAAGCCGCCAGCCCTaGCGCCGCCAGTACAGCCACGACCGGTTACCAGGCGACCACCGG | + |
|
Preference number: 5 (lower is better) Translates to: RGLRPTDLCGLSRQP*RRQYSHDRLPGDHR Trigger: CCGGTGGTCGCCTGGTAACCGGTCGTGGCTGTACTGGCGGCGGCAGGGCTGGCGGCTTAGGCCGCAGAGGTCTGTGGGCCTGAGCCCACG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS GCA 90 bp | CGCAGAACGGACAGAGTCCAGCGTGGGCTCAGGCCCACAGACCTCTaGGGCCTAAGCCGCCAGCCCTGCCGCCGCCAGTACAGCCACGAC | + |
|
Preference number: 5 (lower is better) Translates to: RRTDRVQRGLRPTDL*GLSRQPCRRQYSHD Trigger: GTCGTGGCTGTACTGGCGGCGGCAGGGCTGGCGGCTTAGGCCGCAGAGGTCTGTGGGCCTGAGCCCACGCTGGACTCTGTCCGTTCTGCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264538.4 ENST00000478157.1 |
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| CDS GCA 90 bp | GGGCGCTCGGGGACGCCGGCACCCACCTGGACGGGGCCTTCAGGTTaGTCTTCCGGAGGAACTCCTCCTCGTAGCGGAGCAGCTTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRSGTPAPTWTGPSG*SSGGTPPRSGAASA Trigger: AGCTGAAGCTGCTCCGCTACGAGGAGGAGTTCCTCCGGAAGAGCAACCTGAAGGCCCCGTCCAGGTGGGTGCCGGCGTCCCCGAGCGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492106.1 |
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| CDS CCA 90 bp | CGACGGCCAGAGCAGCAGTCATCGCAGAACGGACAGAGTCCAGCGTaGGCTCAGGCCCACAGACCTCTGCGGCCTAAGCCGCCAGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RRPEQQSSQNGQSPA*AQAHRPLRPKPPAL Trigger: CAGGGCTGGCGGCTTAGGCCGCAGAGGTCTGTGGGCCTGAGCCCACGCTGGACTCTGTCCGTTCTGCGATGACTGCTGCTCTGGCCGTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264538.4 ENST00000478157.1 |
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| CDS-3UTR CAA 90 bp | AGGTGGAGCAAGGTAAAGGACTGTGTCAGCAGTTCATGTTGTGACAGCAGCAGCGCTGGTATCGCTCCTTaGCCTCACTCAGCTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RWSKVKDCVSSSCCDSSSAGIAP*PHSAGL Trigger: AAGCCCAGCTGAGTGAGGCAAAGGAGCGATACCAGC...GCTGCTGCTGTCACAACATGAACTGCTGACACAGTCCTTTACCTTGCTCCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CAA 90 bp | CACGTTCCACTTCTAGGCTCCATTCTGCAGCATCTGTTGTGGATTCCAAAATATGACGGGGCCTTCAGGTaGCTCTTCCGGAGGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: HVPLLGSILQHLLWIPKYDGAFR*LFRRNS Trigger: GGAGTTCCTCCGGAAGAGCAACCTGAAGGCCCCGTC...ATATTTTGGAATCCACAACAGATGCTGCAGAATGGAGCCTAGAAGTGGAACGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS-3UTR CAA 90 bp | GTCATCGTTCCTTCTTCTACAAAATGGTTCCCTAGTATAGCCGATACCACAGAAGACGGGGCCTTCAGGTaGCTCTTCCGGAGGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: VIVPSSTKWFPSIADTTEDGAFR*LFRRNS Trigger: GGAGTTCCTCCGGAAGAGCAACCTGAAGGCCCCGTC...TTCTGTGGTATCGGCTATACTAGGGAACCATTTTGTAGAAGAAGGAACGATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CAA 90 bp | TGTGACAGCAGCAGCATCTGCAGAAAACGCAGGTCATATACCTTGGCTTACACAAGGCTGTCTCCTGCTTaGTGTTCCCCTGGCCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CDSSSICRKRRSYTLAYTRLSPA*CSPGQF Trigger: AAACTGGCCAGGGGAACACAAAGCAGGAGACAGCCT...TGTGTAAGCCAAGGTATATGACCTGCGTTTTCTGCAGATGCTGCTGCTGTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CAA 90 bp | TGTGACAGCAGCAGCATCTGCAGAAAACGCAGGTCATATACCTTGGCTTACACAAGGGTCATCATATTCTaGAGGCTGCTCAAAGGGACG | + |
|
Preference number: 5 (lower is better) Translates to: CDSSSICRKRRSYTLAYTRVIIF*RLLKGT Trigger: CGTCCCTTTGAGCAGCCTCAAGAATATGATGACCCT...TGTGTAAGCCAAGGTATATGACCTGCGTTTTCTGCAGATGCTGCTGCTGTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CAA 90 bp | GGGCACAAAGCACTTATGATCACTGCAGAGGTGGAGCAAGGTAAAGGACTGTGTCGCAGGTCATATACCTaGGCTTACACAAGGAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: GHKALMITAEVEQGKGLCRRSYT*AYTRNA Trigger: AGCATTCCTTGTGTAAGCCAAGGTATATGACCTGCG...ACACAGTCCTTTACCTTGCTCCACCTCTGCAGTGATCATAAGTGCTTTGTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CAA 90 bp | TGTGACAGCAGCAGCATCTGCAGAAAACGCAGGTCATATACCTTGGCTTACACAAGGCAGTTTGGGTTCTaGGAAAGAATCCTGCCTACC | + |
|
Preference number: 5 (lower is better) Translates to: CDSSSICRKRRSYTLAYTRQFGF*ERILPT Trigger: GGTAGGCAGGATTCTTTCCAAGAACCCAAACTGCCT...TGTGTAAGCCAAGGTATATGACCTGCGTTTTCTGCAGATGCTGCTGCTGTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CAA 90 bp | GTGACTTTCAGTTGCGGTAGTACACGTTCCACTTCTAGGCTCCATTCTGCAGCATTGTCCAAAAATCCCTaGGTCTCCTTTAGAGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: VTFSCGSTRSTSRLHSAALSKNP*VSFRAD Trigger: ATCTGCTCTAAAGGAGACCAAGGGATTTTTGGACAA...TGCTGCAGAATGGAGCCTAGAAGTGGAACGTGTACTACCGCAACTGAAAGTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS-3UTR CAA 90 bp | AGGTGGAGCAAGGTAAAGGACTGTGTCAGCAGTTCATGTTGTGACAGCAGCAGCATTCTGCAGCATCTGTaGTGGATTCCAAAATATCTT | + |
|
Preference number: 5 (lower is better) Translates to: RWSKVKDCVSSSCCDSSSILQHL*WIPKYL Trigger: AAGATATTTTGGAATCCACAACAGATGCTGCAGAAT...GCTGCTGCTGTCACAACATGAACTGCTGACACAGTCCTTTACCTTGCTCCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CAA 90 bp | GTACACGTTCCACTTCTAGGCTCCATTCTGCAGCATCTGTTGTGGATTCCAAAAAGCTGCACGATATTCTaGAACCAAATTCTCAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VHVPLLGSILQHLLWIPKSCTIF*NQILKL Trigger: CAGCTTGAGAATTTGGTTCAAGAATATCGTGCAGCT...TTTTGGAATCCACAACAGATGCTGCAGAATGGAGCCTAGAAGTGGAACGTGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS-3UTR CAA 90 bp | TGTGACAGCAGCAGCATCTGCAGAAAACGCAGGTCATATACCTTGGCTTACACAAACCTGACTTTAATTTaGAAGGAGGAAAATCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CDSSSICRKRRSYTLAYTNLTLI*KEENLQ Trigger: CTGCAGATTTTCCTCCTTCAAAATTAAAGTCAGGTT...TGTGTAAGCCAAGGTATATGACCTGCGTTTTCTGCAGATGCTGCTGCTGTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CAA 90 bp | GTACACGTTCCACTTCTAGGCTCCATTCTGCAGCATCTGTTGTGGATTCCAAAAAAAATATCTTCTTGTTaGGCAGTCTCGTTCATATCC | + |
|
Preference number: 5 (lower is better) Translates to: VHVPLLGSILQHLLWIPKKISSC*AVSFIS Trigger: GGATATGAACGAGACTGCCAAACAAGAAGATATTTT...TTTTGGAATCCACAACAGATGCTGCAGAATGGAGCCTAGAAGTGGAACGTGTAC 42% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS-3UTR CAA 90 bp | GTCATCGTTCCTTCTTCTACAAAATGGTTCCCTAGTATAGCCGATACCACAGAAAGCTGCACGATATTCTaGAACCAAATTCTCAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VIVPSSTKWFPSIADTTESCTIF*NQILKL Trigger: CAGCTTGAGAATTTGGTTCAAGAATATCGTGCAGCT...TTCTGTGGTATCGGCTATACTAGGGAACCATTTTGTAGAAGAAGGAACGATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS TCA 90 bp | TCGGATAGTATGTTAGATATTGTTGCATTAGGGTCATCATATTCTTaGGGCTGCTCAAAGGGACGTCCCGCTTTATTAATCAACCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SDSMLDIVALGSSYS*GCSKGRPALLINQA Trigger: TGCTTGGTTGATTAATAAAGCGGGACGTCCCTTTGAGCAGCCTCAAGAATATGATGACCCTAATGCAACAATATCTAACATACTATCCGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000264538.4 ENST00000465024.1 ENST00000485979.1 ENST00000492106.1 |
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| CDS-3UTR CAA 90 bp | AAACGCAGGTCATATACCTTGGCTTACACAAGGAATGCTATGAAAAATGAGCCATTGTCCAAAAATCCCTaGGTCTCCTTTAGAGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KRRSYTLAYTRNAMKNEPLSKNP*VSFRAD Trigger: ATCTGCTCTAAAGGAGACCAAGGGATTTTTGGACAA...TGGCTCATTTTTCATAGCATTCCTTGTGTAAGCCAAGGTATATGACCTGCGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CAA 90 bp | AAACGCAGGTCATATACCTTGGCTTACACAAGGAATGCTATGAAAAATGAGCCAACTTCTCCTTCAGCTTaGATTGGAGTAGTGTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KRRSYTLAYTRNAMKNEPTSPSA*IGVVCV Trigger: AACACACACTACTCCAATCAAAGCTGAAGGAGAAGT...TGGCTCATTTTTCATAGCATTCCTTGTGTAAGCCAAGGTATATGACCTGCGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CAA 90 bp | AAACGCAGGTCATATACCTTGGCTTACACAAGGAATGCTATGAAAAATGAGCCAATGTTCCTAGTCATGTaGGACTTCTCCTTCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KRRSYTLAYTRNAMKNEPMFLVM*DFSFSF Trigger: AAAGCTGAAGGAGAAGTCCAACATGACTAGGAACAT...TGGCTCATTTTTCATAGCATTCCTTGTGTAAGCCAAGGTATATGACCTGCGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CAA 90 bp | TTATTGTCAGTCCTAATCGTGACTTTCAGTTGCGGTAGTACACGTTCCACTTCTAACCTGACTTTAATTTaGAAGGAGGAAAATCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLSVLIVTFSCGSTRSTSNLTLI*KEENLQ Trigger: CTGCAGATTTTCCTCCTTCAAAATTAAAGTCAGGTT...AGAAGTGGAACGTGTACTACCGCAACTGAAAGTCACGATTAGGACTGACAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS-3UTR CAA 90 bp | GTTCCACTTCTAGGCTCCATTCTGCAGCATCTGTTGTGGATTCCAAAATATCTTTTCCAAAATATCTTCTaGTTTGGCAGTCTCGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VPLLGSILQHLLWIPKYLFQNIF*FGSLVH Trigger: ATGAACGAGACTGCCAAACAAGAAGATATTTTGGAA...AAGATATTTTGGAATCCACAACAGATGCTGCAGAATGGAGCCTAGAAGTGGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS-3UTR CAA 90 bp | AAACGCAGGTCATATACCTTGGCTTACACAAGGAATGCTATGAAAAATGAGCCAATTCTCCAATCCTTATaGTCAGTCCTAATCGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: KRRSYTLAYTRNAMKNEPILQSL*SVLIVT Trigger: AGTCACGATTAGGACTGACAATAAGGATTGGAGAAT...TGGCTCATTTTTCATAGCATTCCTTGTGTAAGCCAAGGTATATGACCTGCGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CAA 90 bp | AAACGCAGGTCATATACCTTGGCTTACACAAGGAATGCTATGAAAAATGAGCCAAAAATATCTTCTTGTTaGGCAGTCTCGTTCATATCC | + |
|
Preference number: 5 (lower is better) Translates to: KRRSYTLAYTRNAMKNEPKISSC*AVSFIS Trigger: GGATATGAACGAGACTGCCAAACAAGAAGATATTTT...TGGCTCATTTTTCATAGCATTCCTTGTGTAAGCCAAGGTATATGACCTGCGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CAA 90 bp | CATCTGTTGTGGATTCCAAAATATCTTCTTGTTTGGCAGTCTCGTTCATATCCAATTCTCCAATCCTTATaGTCAGTCCTAATCGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: HLLWIPKYLLVWQSRSYPILQSL*SVLIVT Trigger: AGTCACGATTAGGACTGACAATAAGGATTGGAGAAT...TGGATATGAACGAGACTGCCAAACAAGAAGATATTTTGGAATCCACAACAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS-3UTR CAA 90 bp | ATCGTTCCTTCTTCTACAAAATGGTTCCCTAGTATAGCCGATACCACAGAAAAATTCCAAAATATCTTCTaGTTTGGCAGTCTCGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: IVPSSTKWFPSIADTTEKFQNIF*FGSLVH Trigger: ATGAACGAGACTGCCAAACAAGAAGATATTTTGGAA...TTTTTCTGTGGTATCGGCTATACTAGGGAACCATTTTGTAGAAGAAGGAACGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000264538.4 |
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| CDS-3UTR CAA 90 bp | TTCCAAAATATCTTCTTGTTTGGCAGTCTCGTTCATATCCAAGTGATATGTCTGATTCTGCAGCATCTGTaGTGGATTCCAAAATATCTT | + |
|
Preference number: 5 (lower is better) Translates to: FQNIFLFGSLVHIQVICLILQHL*WIPKYL Trigger: AAGATATTTTGGAATCCACAACAGATGCTGCAGAAT...CAGACATATCACTTGGATATGAACGAGACTGCCAAACAAGAAGATATTTTGGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478157.1 |
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| CDS GCA 72 bp | AGGCCCACAGACCTCTGCGGCCTAAGCCGCCAGCCCTaGCGCCGCCAGTACAGCCACGACCGGTTACCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RPTDLCGLSRQP*RRQYSHDRLPG Trigger: GCCTGGTAACCGGTCGTGGCTGTACTGGCGGCGGCAGGGCTGGCGGCTTAGGCCGCAGAGGTCTGTGGGCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264538.4 ENST00000478157.1 |
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| CDS GCA 72 bp | GGGACGCCGGCACCCACCTGGACGGGGCCTTCAGGTTaGTCTTCCGGAGGAACTCCTCCTCGTAGCGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GTPAPTWTGPSG*SSGGTPPRSGA Trigger: TGCTCCGCTACGAGGAGGAGTTCCTCCGGAAGAGCAACCTGAAGGCCCCGTCCAGGTGGGTGCCGGCGTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492106.1 |
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| CDS GCA 72 bp | GCAGTGCAAAATAGTGTCTGGACGGGGCCTTCAGGTTaGTCTTCCGGAGGAACTCCTCCTCGTAGCGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: AVQNSVWTGPSG*SSGGTPPRSGA Trigger: TGCTCCGCTACGAGGAGGAGTTCCTCCGGAAGAGCAACCTGAAGGCCCCGTCCAGACACTATTTTGCACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264538.4 ENST00000465024.1 |
||
| CDS GCA 72 bp | AGGAGTCTGGTTCTTTCCGTCACTCCTCCATTTCCCTaGTGGTATCGCTCCTTTGCCTCACTCAGCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RSLVLSVTPPFP*WYRSFASLSWA Trigger: AGCCCAGCTGAGTGAGGCAAAGGAGCGATACCAGCAGGGAAATGGAGGAGTGACGGAAAGAACCAGACTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264538.4 ENST00000468021.1 |
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| CDS GCA 72 bp | AAACATGTAGAACTGTTCGCCAGGGTTGGTAGGCAGTaGAAAATAGTGTCTGGACGGGGCCTTCAGGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: KHVELFARVGRQ*KIVSGRGLQVA Trigger: AGCAACCTGAAGGCCCCGTCCAGACACTATTTTGCACTGCCTACCAACCCTGGCGAACAGTTCTACATGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264538.4 ENST00000465024.1 |
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| CDS TCA 72 bp | ATGTTAGATATTGTTGCATTAGGGTCATCATATTCTTaGGGCTGCTCAAAGGGACGTCCCGCTTTATTAATC | + |
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Preference number: 6 (lower is better) Translates to: MLDIVALGSSYS*GCSKGRPALLI Trigger: GATTAATAAAGCGGGACGTCCCTTTGAGCAGCCTCAAGAATATGATGACCCTAATGCAACAATATCTAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000264538.4 ENST00000465024.1 ENST00000485979.1 ENST00000492106.1 |
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