Pregenerated sensors for IFT52 (Homo sapiens)
Ensembl gene IDs: ENSG00000101052Ensembl transcript IDs: ENST00000373030.8, ENST00000373039.4, ENST00000460014.1, ENST00000461012.1, ENST00000467024.5, ENST00000468420.5, ENST00000471199.1, ENST00000476986.1
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCTATCTGAGTATTACAGAAGATGCATATACCTTCCAGAGCTCATaGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGTTGAAAAAC | + |
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Preference number: 1 (lower is better) Translates to: TYLSITEDAYTFQSS*RKECINNFDKELKN Trigger: GTTTTTCAACTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATATGCATCTTCTGTAATACTCAGATAGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| 3UTR CCA 72 bp | AGTATTACAGAAGATGCATATACCTTCCAGAGCTCATaGAGGAAAGAGTGTATAAACAATTTTGATAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: SITEDAYTFQSS*RKECINNFDKE Trigger: CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATATGCATCTTCTGTAATACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR TCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGCGACCACCGCTCACCTaGCGCCGCCCAGCATCCCGC | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKERPPLT*RRPASR Trigger: GCGGGATGCTGGGCGGCGTCAGGTGAGCGGTGGTCG...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373030.8 |
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| CDS-3UTR TCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGTTCTCCATGGTTACCTaGCGCCGCCCAGCATCCCGC | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEFSMVT*RRPASR Trigger: GCGGGATGCTGGGCGGCGTCAGGTAACCATGGAGAA...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373039.4 |
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| CDS-3UTR TCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGGCTCGTGAGCCTCGATaGCGCTGTGGAAGGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEAREPR*RCGRRW Trigger: CCACCTCCTTCCACAGCGTCATCGAGGCTCACGAGC...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR TCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGGGAAAAACCGCAGGCTaGAGGGTTGGCAGCGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEGKTAG*RVGSGV Trigger: GACGCCGCTGCCAACCCTTCAGCCTGCGGTTTTTCC...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR TCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGTTCTCCATGGTTACCTaGGGCCCAGCGACCACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEFSMVT*GPATTA Trigger: AGCGGTGGTCGCTGGGCCTCAGGTAACCATGGAGAA...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373030.8 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGCGCAGGCTGAAGGGTTaGCAGCGGCGTCTCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKERRLKG*QRRLKL Trigger: CAGTTTGAGACGCCGCTGCCAACCCTTCAGCCTGCG...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR TCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGAGCGGCGTCTCAAACTaGGGCTGGATGAGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKESGVSN*GWMSWS Trigger: ACTCCAGCTCATCCAGCCTCAGTTTGAGACGCCGCT...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGGCAGCTCTTTCTCCATaGTTACCTGACGCCGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEAALSP*LPDAAQ Trigger: CTGGGCGGCGTCAGGTAACCATGGAGAAAGAGCTGC...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGGCCTCGATGACGCTGTaGAAGGAGGTGGTATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEASMTL*KEVVSS Trigger: GCTGGATACCACCTCCTTCCACAGCGTCATCGAGGC...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR TCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGACATTTAGCTGCTCGTaGGCCTCGATGACGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKETFSCS*ASMTLW Trigger: CCACAGCGTCATCGAGGCTCACGAGCAGCTAAATGT...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGCGCTGTGGAAGGAGGTaGTATCCAGCTGGAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKERCGRR*YPAGRW Trigger: CCATCTTCCAGCTGGATACCACCTCCTTCCACAGCG...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGGCAGCTCTTTCTCCATaGTTACCTGAGGCCCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEAALSP*LPEAQR Trigger: TCGCTGGGCCTCAGGTAACCATGGAGAAAGAGCTGC...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373030.8 |
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| CDS-3UTR GCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGAGGCACAGCCTTTCCTaGAGCTCGGCTAATTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKERHSLS*SSANFP Trigger: AGGGAAATTAGCCGAGCTGCAGGAAAGGCTGTGCCT...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR GCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGAATCTGAGCCAGCCGTaGCTTCTCAGAGGAGAACGT | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKENLSQP*LLRGER Trigger: ACGTTCTCCTCTGAGAAGGCACGGCTGGCTCAGATT...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGTCCGCTTTGATAGGGTaGCTGTGTAGGGCAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKESALIG*LCRAAS Trigger: TGATGCTGCCCTACACAGCCACCCTATCAAAGCGGA...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGTATCCAGCTGGAAGATaGACAGGTCGAAGAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEYPAGR*TGRRGW Trigger: CCACCCTCTTCGACCTGTCCATCTTCCAGCTGGATA...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGGAGGTGGTATCCAGCTaGAAGATGGACAGGTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEEVVSS*KMDRSK Trigger: CTTCGACCTGTCCATCTTCCAGCTGGATACCACCTC...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGGTAACTCCCGGAAACTaGGAGGAAAAACCGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEVTPGN*EEKPQA Trigger: AGCCTGCGGTTTTTCCTCCCAGTTTCCGGGAGTTAC...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR TCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGCCACTGCTGGTTTCATaGCACTCAATGTGGCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEPLLVS*HSMWHQ Trigger: TTGGTGCCACATTGAGTGTCATGAAACCAGCAGTGG...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR TCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGGGATGTCTCCTGTCGTaGGCCACTGGAAAACAACAT | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEGCLLS*ATGKQH Trigger: ATGTTGTTTTCCAGTGGCTCACGACAGGAGACATCC...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR TCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGCAAACTGAGGCTGGATaGGCTGGAGTGGTTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEQTEAG*AGVVHV Trigger: AACATGAACCACTCCAGCTCATCCAGCCTCAGTTTG...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR TCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGCACTTATTGGTAATCTaGGCCAGCCGTGCCTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEHLLVI*ASRAFS Trigger: TGAGAAGGCACGGCTGGCTCAGATTACCAATAAGTG...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGATCTCATCACTCTCCTaGAGACACTCTCGATTCCGC | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEISSLS*RHSRFR Trigger: GCGGAATCGAGAGTGTCTCCAGGAGAGTGATGAGAT...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGGGTGGTAAAGTCCCTTaGGATCTCATCACTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEGGKVP*DLITLL Trigger: CAGGAGAGTGATGAGATCCCAAGGGACTTTACCACC...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR TCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGACTGAACATGTGACATaGACCAAGCACTGCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKETEHVT*TKHCQL Trigger: AAGCTGGCAGTGCTTGGTTCATGTCACATGTTCAGT...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR GCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGAGACAGAACCGCCACTaGTGGTTTCATGACACTCAA | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKERQNRH*WFHDTQ Trigger: TTGAGTGTCATGAAACCAGCAGTGGCGGTTCTGTCT...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGACAAAGGTGAGAGCCTaGGCATTGTTTCCACTGCTT | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKETKVRA*ALFPLL Trigger: AAGCAGTGGAAACAATGCCCAGGCTCTCACCTTTGT...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGCAGAACCGCCACTGCTaGTTTCATGACACTCAATGT | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEQNRHC*FHDTQC Trigger: ACATTGAGTGTCATGAAACCAGCAGTGGCGGTTCTG...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGTCAATCTGGTTTAGGTaGATGTCTCCTGTCGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKESIWFR*MSPVVS Trigger: GCTCACGACAGGAGACATCCACCTAAACCAGATTGA...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGTTGAACTCCACCACTTaGAAGAAGACGTGCTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKELNSTT*KKTCSR Trigger: CCTTGAGCACGTCTTCTTCCAAGTGGTGGAGTTCAA...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR TCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGCCTTTTTGTAGGCATTaGAAAGAATGGTGCTCCGCA | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEPFCRH*KEWCSA Trigger: TGCGGAGCACCATTCTTTTCAATGCCTACAAAAAGG...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR TCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGCCTGGTTCAATTTCTTaGACTCCACCACTTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEPGSIS*TPPLGR Trigger: TCTTCCAAGTGGTGGAGTTCAAGAAATTGAACCAGG...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGAATGGGTCTGTTAAGTaGGAAGCAGACAGAACCTGT | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKENGSVK*EADRTC Trigger: ACAGGTTCTGTCTGCTTCCCACTTAACAGACCCATT...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGCCTGTCGTGAGCCACTaGAAAACAACATCCATGATT | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEPVVSH*KTTSMI Trigger: AATCATGGATGTTGTTTTCCAGTGGCTCACGACAGG...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGTCCTCAGCATCAATCTaGTTTAGGTGGATGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKESSASI*FRWMSP Trigger: AGGAGACATCCACCTAAACCAGATTGATGCTGAGGA...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGGTAGTCAGAAATCTCTaGGTCCTCAGCATCAATCTG | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEVVRNL*VLSINL Trigger: CAGATTGATGCTGAGGACCCAGAGATTTCTGACTAC...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGGCTCAAGGATATGTTTaGCATCCTGTTGGTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEAQGYV*HPVGPL Trigger: CAAAGGACCAACAGGATGCCAAACATATCCTTGAGC...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR TCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGCCCACCTTGGTTCTTTaGGTGATAGAAAGCCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEPTLVL*VIESQN Trigger: ATTTTGGCTTTCTATCACTCAAAGAACCAAGGTGGG...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR GCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGACTTGGAAGAAGACGTaGTCAAGGATATGTTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKETWKKT*SRICLA Trigger: TGCCAAACATATCCTTGAGCACGTCTTCTTCCAAGT...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGTGTTTGGCATCCTGTTaGTCCTTTGGTAGTTTACTG | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKECLASC*SFGSLL Trigger: CAGTAAACTACCAAAGGACCAACAGGATGCCAAACA...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGACCTTCCAGAGCTCATaGAGGAAAGAGTGTATAAAC | + |
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Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKETFQSS*RKECIN Trigger: GTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGT...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR TCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGTATCACCACACTTCCTaGCATAAAATTCCAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEYHHTS*HKIPGL Trigger: AAGACCTGGAATTTTATGTCAGGAAGTGTGGTGATA...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR GCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGGAGTATTACAGAAGATaGATATACCTTCCAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEEYYRR*IYLPEL Trigger: GAGCTCTGGAAGGTATATGCATCTTCTGTAATACTC...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGTATTGGTGTCAAATCTaGATTCTCCACCTTCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEYWCQI*ILHLLL Trigger: TAGGAGAAGGTGGAGAATCCAGATTTGACACCAATA...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR TCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGTCATCTTTTAAGCTCTaGATCTTCCAATTACTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKESSFKL*IFQLLR Trigger: TCGGAGTAATTGGAAGATTCAGAGCTTAAAAGATGA...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR TCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGCCAAATATTGATCACTaGACATGTGACATGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEPNIDH*TCDMNQ Trigger: TTGGTTCATGTCACATGTTCAGTGATCAATATTTGG...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGCCTTTGGTAGTTTACTaGTTACTCCAAGAATATCAC | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEPLVVY*LLQEYH Trigger: GTGATATTCTTGGAGTAACCAGTAAACTACCAAAGG...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR GCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGGAAATTGTTCTGGAATaGTGTTTCACTTGTATCGAT | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKEEIVLE*CFTCID Trigger: ATCGATACAAGTGAAACAGCATTCCAGAACAATTTC...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CCA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGCTTCAGAAATTGTTCTaGAATGCTGTTTCACTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: YTFQSSWRKECINNFDKELQKLF*NAVSLV Trigger: TACAAGTGAAACAGCATTCCAGAACAATTTCTGAAG...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS CCA 90 bp | TGCAGTGTGGCTCAGAGGCCCACAGGTACTGACTCGATGACGCTGTaGAAGGAGGTGGTATCCAGCTGGAAGATGGACAGGTCGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CSVAQRPTGTDSMTL*KEVVSSWKMDRSKR Trigger: CCTCTTCGACCTGTCCATCTTCCAGCTGGATACCACCTCCTTCCACAGCGTCATCGAGTCAGTACCTGTGGGCCTCTGAGCCACACTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467024.5 |
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| CDS TCA 90 bp | CCGCAGGCTGAAGGGTTGGCAGCGGCGTCTCAAACTGAGGCTGGATaGGCTGGAGTGGTTCATGTTTCACATTTAGCTGCTCGTGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PQAEGLAAASQTEAG*AGVVHVSHLAAREP Trigger: AGGCTCACGAGCAGCTAAATGTGAAACATGAACCACTCCAGCTCATCCAGCCTCAGTTTGAGACGCCGCTGCCAACCCTTCAGCCTGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000468420.5 |
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| CDS TCA 90 bp | GAATGGAGTGCAGTGTGGCTCAGAGGCCCACAGGTACTGACTCGATaGCGCTGTGGAAGGAGGTGGTATCCAGCTGGAAGATGGACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EWSAVWLRGPQVLTR*RCGRRWYPAGRWTG Trigger: ACCTGTCCATCTTCCAGCTGGATACCACCTCCTTCCACAGCGTCATCGAGTCAGTACCTGTGGGCCTCTGAGCCACACTGCACTCCATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467024.5 |
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| CDS TCA 90 bp | AACACTCAGAATGGAGTGCAGTGTGGCTCAGAGGCCCACAGGTACTaGCTCGATGACGCTGTGGAAGGAGGTGGTATCCAGCTGGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: NTQNGVQCGSEAHRY*LDDAVEGGGIQLED Trigger: ATCTTCCAGCTGGATACCACCTCCTTCCACAGCGTCATCGAGTCAGTACCTGTGGGCCTCTGAGCCACACTGCACTCCATTCTGAGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467024.5 |
||
| CDS CCA 90 bp | ACAGGTACTGACTCGATGACGCTGTGGAAGGAGGTGGTATCCAGCTaGAAGATGGACAGGTCGAAGAGGGTGGTAAAGTCCCTTGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: TGTDSMTLWKEVVSS*KMDRSKRVVKSLGI Trigger: GATCCCAAGGGACTTTACCACCCTCTTCGACCTGTCCATCTTCCAGCTGGATACCACCTCCTTCCACAGCGTCATCGAGTCAGTACCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467024.5 |
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| CDS CCA 90 bp | TCTCATCACTCTCCTGGAGACACTCTCGATTCCGCTTTGATAGGGTaGCTGTGTAGGGCAGCATCATGTAGTCAGAAATCTCTGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SHHSPGDTLDSALIG*LCRAASCSQKSLGP Trigger: AGGACCCAGAGATTTCTGACTACATGATGCTGCCCTACACAGCCACCCTATCAAAGCGGAATCGAGAGTGTCTCCAGGAGAGTGATGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000467024.5 ENST00000468420.5 |
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| CDS CCA 90 bp | GTTAAGTGGGAAGCAGACAGAACCTGTAGACAGAACCGCCACTGCTaGTTTCATGACACTCAATGTGGCACCAAAAGGATACACAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VKWEADRTCRQNRHC*FHDTQCGTKRIHKG Trigger: ACCTTTGTGTATCCTTTTGGTGCCACATTGAGTGTCATGAAACCAGCAGTGGCGGTTCTGTCTACAGGTTCTGTCTGCTTCCCACTTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000467024.5 |
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| CDS CCA 90 bp | AATTCGGTGTCTACCTCTGGGTCCTCAGCATCAATCTGGTTTAGGTaGATGTCTCCTGTCGTGAGCCACTGGAAAACAACATCCATGATT | + |
|
Preference number: 5 (lower is better) Translates to: NSVSTSGSSASIWFR*MSPVVSHWKTTSMI Trigger: AATCATGGATGTTGTTTTCCAGTGGCTCACGACAGGAGACATCCACCTAAACCAGATTGATGCTGAGGACCCAGAGGTAGACACCGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460014.1 |
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| CDS-3UTR CAA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGCCGCAGGCTGAAGGGTaGGCAGCGGCGTCTCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: YTFQSSWRKECINNFDKEPQAEG*AAASQT Trigger: AGTTTGAGACGCCGCTGCCAACCCTTCAGCCTGCGG...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS GCA 90 bp | TCTGTTAAGTGGGAAGCAGACAGAACCTGTAGACAGAACCGCCACTaGTGGTTTCATGACACTCAATGTGGCACCAAAAGGATACACAAA | + |
|
Preference number: 5 (lower is better) Translates to: SVKWEADRTCRQNRH*WFHDTQCGTKRIHK Trigger: TTTGTGTATCCTTTTGGTGCCACATTGAGTGTCATGAAACCAGCAGTGGCGGTTCTGTCTACAGGTTCTGTCTGCTTCCCACTTAACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000467024.5 |
||
| CDS CCA 90 bp | GTTTCTAATAATTCGGTGTCTACCTCTGGGTCCTCAGCATCAATCTaGTTTAGGTGGATGTCTCCTGTCGTGAGCCACTGGAAAACAACA | + |
|
Preference number: 5 (lower is better) Translates to: VSNNSVSTSGSSASI*FRWMSPVVSHWKTT Trigger: TGTTGTTTTCCAGTGGCTCACGACAGGAGACATCCACCTAAACCAGATTGATGCTGAGGACCCAGAGGTAGACACCGAATTATTAGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460014.1 |
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| CDS CCA 90 bp | ACCACTTGGAAGAAGACGTGCTCAAGGATATGTTTGGCATCCTGTTaGTCCTTTGGTAGTTTACTGGTTACTCCAAGAATATCACCACAC | + |
|
Preference number: 5 (lower is better) Translates to: TTWKKTCSRICLASC*SFGSLLVTPRISPH Trigger: GTGTGGTGATATTCTTGGAGTAACCAGTAAACTACCAAAGGACCAACAGGATGCCAAACATATCCTTGAGCACGTCTTCTTCCAAGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000471199.1 |
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| CDS CCA 90 bp | CAAAATGATACATCTTCCTCATGTGGCATCAGAAAACACACTCACTaGGCATTGTTTCCACTGCTTTCCTCATCAATGATCCCAGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: QNDTSSSCGIRKHTH*ALFPLLSSSMIPGT Trigger: TGTGCCTGGGATCATTGATGAGGAAAGCAGTGGAAACAATGCCCAGTGAGTGTGTTTTCTGATGCCACATGAGGAAGATGTATCATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476986.1 |
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| CDS-3UTR CAA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGACTCTCGATTCCGCTTaGATAGGGTGGCTGTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: YTFQSSWRKECINNFDKETLDSA*IGWLCR Trigger: CCTACACAGCCACCCTATCAAAGCGGAATCGAGAGT...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS CCA 90 bp | GGAGGCAGAAAAAGCTTCAAGAGGCATGGTCTTCAGAAATTGTTCTaGAATGCTGTTTCACTTGTATCGATGTCATGTTCCTGGTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GGRKSFKRHGLQKLF*NAVSLVSMSCSWFN Trigger: ATTGAACCAGGAACATGACATCGATACAAGTGAAACAGCATTCCAGAACAATTTCTGAAGACCATGCCTCTTGAAGCTTTTTCTGCCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000471199.1 |
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| CDS-3UTR CAA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGCTTGAACTCCACCACTaGGAAGAAGACGTGCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: YTFQSSWRKECINNFDKELELHH*EEDVLK Trigger: CTTGAGCACGTCTTCTTCCAAGTGGTGGAGTTCAAG...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS TCA 90 bp | CCTTTGGTAGTTTACTGGTTACTCCAAGAATATCACCACACTTCCTaGCATAAAATTCCAGGTCTTCTTCAGTACCTAAGACAGTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLVVYWLLQEYHHTS*HKIPGLLQYLRQLE Trigger: CTCCAACTGTCTTAGGTACTGAAGAAGACCTGGAATTTTATGTCAGGAAGTGTGGTGATATTCTTGGAGTAACCAGTAAACTACCAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471199.1 |
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| CDS GCA 90 bp | GTACCTAAGACAGTTGGAGTAGTAGTTAGATTAATTCTTAACTTCTaGCCTTCCCAAAGTACAGACTTAGTGTGTTTCAGGTATGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VPKTVGVVVRLILNF*PSQSTDLVCFRYAL Trigger: CAGGGCATACCTGAAACACACTAAGTCTGTACTTTGGGAAGGGCAGAAGTTAAGAATTAATCTAACTACTACTCCAACTGTCTTAGGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471199.1 |
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| CDS CCA 90 bp | GGAGGCAGAAAAAGCTTCAAGAGGCATGGTCTTCAGAAATTGTTCTaGAATGCTGTTTCACTTGTATCGATGTCATGTTCACTTATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GGRKSFKRHGLQKLF*NAVSLVSMSCSLIG Trigger: ACCAATAAGTGAACATGACATCGATACAAGTGAAACAGCATTCCAGAACAATTTCTGAAGACCATGCCTCTTGAAGCTTTTTCTGCCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000461012.1 |
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| CDS-3UTR CAA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGTGCTCAAGGATATGTTaGGCATCCTGTTGGTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: YTFQSSWRKECINNFDKECSRIC*ASCWSF Trigger: AAAGGACCAACAGGATGCCAAACATATCCTTGAGCA...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS-3UTR CAA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGTCCTGGTTCAATTTCTaGAACTCCACCACTTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: YTFQSSWRKECINNFDKESWFNF*NSTTWK Trigger: CTTCCAAGTGGTGGAGTTCAAGAAATTGAACCAGGA...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS GCA 90 bp | CAGAAAAAGCTTCAAGAGGCATGGTCTTCAGAAATTGTTCTGGAATaGTGTTTCACTTGTATCGATGTCATGTTCCTGGTTCAATTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QKKLQEAWSSEIVLE*CFTCIDVMFLVQFL Trigger: AAGAAATTGAACCAGGAACATGACATCGATACAAGTGAAACAGCATTCCAGAACAATTTCTGAAGACCATGCCTCTTGAAGCTTTTTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000471199.1 |
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| CDS-3UTR CAA 90 bp | TATACCTTCCAGAGCTCATGGAGGAAAGAGTGTATAAACAATTTTGATAAGGAGTCCCACCTTGGTTCTTaGAGTGATAGAAAGCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: YTFQSSWRKECINNFDKESHLGS*SDRKPK Trigger: TTTTGGCTTTCTATCACTCAAAGAACCAAGGTGGGA...CTCCTTATCAAAATTGTTTATACACTCTTTCCTCCATGAGCTCTGGAAGGTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS CCA 72 bp | CCGGAAACTGGGAGGAAAAACCGCAGGCTGAAGGGTTaGCAGCGGCGTCTCAAACTGAGGCTGGATGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PETGRKNRRLKG*QRRLKLRLDEL Trigger: CAGCTCATCCAGCCTCAGTTTGAGACGCCGCTGCCAACCCTTCAGCCTGCGGTTTTTCCTCCCAGTTTCCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000468420.5 |
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| CDS TCA 72 bp | GCAGTGTGGCTCAGAGGCCCACAGGTACTGACTCGATaGCGCTGTGGAAGGAGGTGGTATCCAGCTGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: AVWLRGPQVLTR*RCGRRWYPAGR Trigger: TCTTCCAGCTGGATACCACCTCCTTCCACAGCGTCATCGAGTCAGTACCTGTGGGCCTCTGAGCCACACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467024.5 |
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| CDS CCA 72 bp | GCTCAGAGGCCCACAGGTACTGACTCGATGACGCTGTaGAAGGAGGTGGTATCCAGCTGGAAGATGGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: AQRPTGTDSMTL*KEVVSSWKMDR Trigger: CCTGTCCATCTTCCAGCTGGATACCACCTCCTTCCACAGCGTCATCGAGTCAGTACCTGTGGGCCTCTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467024.5 |
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| CDS TCA 72 bp | AATGGAGTGCAGTGTGGCTCAGAGGCCCACAGGTACTaGCTCGATGACGCTGTGGAAGGAGGTGGTATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: NGVQCGSEAHRY*LDDAVEGGGIQ Trigger: CTGGATACCACCTCCTTCCACAGCGTCATCGAGTCAGTACCTGTGGGCCTCTGAGCCACACTGCACTCCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467024.5 |
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| CDS CCA 72 bp | GCCTCGATGACGCTGTGGAAGGAGGTGGTATCCAGCTaGAAGATGGACAGGTCGAAGAGGGTGGTAAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASMTLWKEVVSS*KMDRSKRVVKS Trigger: GGACTTTACCACCCTCTTCGACCTGTCCATCTTCCAGCTGGATACCACCTCCTTCCACAGCGTCATCGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000468420.5 |
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| CDS CCA 72 bp | GACTCGATGACGCTGTGGAAGGAGGTGGTATCCAGCTaGAAGATGGACAGGTCGAAGAGGGTGGTAAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: DSMTLWKEVVSS*KMDRSKRVVKS Trigger: GGACTTTACCACCCTCTTCGACCTGTCCATCTTCCAGCTGGATACCACCTCCTTCCACAGCGTCATCGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467024.5 |
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| CDS TCA 72 bp | GAAGGGTTGGCAGCGGCGTCTCAAACTGAGGCTGGATaGGCTGGAGTGGTTCATGTTTCACATTTAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: EGLAAASQTEAG*AGVVHVSHLAA Trigger: AGCAGCTAAATGTGAAACATGAACCACTCCAGCTCATCCAGCCTCAGTTTGAGACGCCGCTGCCAACCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000468420.5 |
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| CDS CCA 72 bp | AGGGTGGTAAAGTCCCTTGGGATCTCATCACTCTCCTaGAGACACTCTCGATTCCGCTTTGATAGGGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RVVKSLGISSLS*RHSRFRFDRVA Trigger: AGCCACCCTATCAAAGCGGAATCGAGAGTGTCTCCAGGAGAGTGATGAGATCCCAAGGGACTTTACCACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000467024.5 ENST00000468420.5 |
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| CDS CCA 72 bp | AATTCGGTGTCTACCTCTGGGTCCTCAGCATCAATCTaGTTTAGGTGGATGTCTCCTGTCGTGAGCCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: NSVSTSGSSASI*FRWMSPVVSHW Trigger: CCAGTGGCTCACGACAGGAGACATCCACCTAAACCAGATTGATGCTGAGGACCCAGAGGTAGACACCGAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460014.1 |
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| CDS CAA 90 bp | CCCTTGGGATCTCATCACTCTCCTGGAGACACTCTCGATTCCGCTTaGATAGGGTGGCTGTGTAGGGCAGCATCATGTAGTCAGAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: PLGSHHSPGDTLDSA*IGWLCRAASCSQKS Trigger: AGATTTCTGACTACATGATGCTGCCCTACACAGCCACCCTATCAAAGCGGAATCGAGAGTGTCTCCAGGAGAGTGATGAGATCCCAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000467024.5 ENST00000468420.5 |
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| CDS GCA 72 bp | GCTTTCCTCATCAATGATCCCAGGCACAGCCTTTCCTaGAGCTCGGCTAATTTCCCTGTTCAAGACTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: AFLINDPRHSLS*SSANFPVQDST Trigger: AGTGGAGTCTTGAACAGGGAAATTAGCCGAGCTGCAGGAAAGGCTGTGCCTGGGATCATTGATGAGGAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000476986.1 |
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| CDS GCA 72 bp | TGGGAAGCAGACAGAACCTGTAGACAGAACCGCCACTaGTGGTTTCATGACACTCAATGTGGCACCAAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: WEADRTCRQNRH*WFHDTQCGTKR Trigger: CCTTTTGGTGCCACATTGAGTGTCATGAAACCAGCAGTGGCGGTTCTGTCTACAGGTTCTGTCTGCTTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000467024.5 |
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| CDS GCA 72 bp | AGGTTCATGTTTCCAAACCAAACACTCAGAATGGAGTaGAGTGTGGCTCAGAGGCCCACAGGTACTGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: RFMFPNQTLRME*SVAQRPTGTDS Trigger: CGAGTCAGTACCTGTGGGCCTCTGAGCCACACTGCACTCCATTCTGAGTGTTTGGTTTGGAAACATGAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467024.5 |
||
| CDS CCA 72 bp | GAAGATGGACAGGTCGAAGAGGGTGGTAAAGTCCCTTaGGATCTCATCACTCTCCTGGAGACACTCTCGATT | + |
|
Preference number: 6 (lower is better) Translates to: EDGQVEEGGKVP*DLITLLETLSI Trigger: AATCGAGAGTGTCTCCAGGAGAGTGATGAGATCCCAAGGGACTTTACCACCCTCTTCGACCTGTCCATCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000467024.5 ENST00000468420.5 |
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| CDS CAA 72 bp | TCTCATCACTCTCCTGGAGACACTCTCGATTCCGCTTaGATAGGGTGGCTGTGTAGGGCAGCATCATGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: SHHSPGDTLDSA*IGWLCRAASCS Trigger: ACTACATGATGCTGCCCTACACAGCCACCCTATCAAAGCGGAATCGAGAGTGTCTCCAGGAGAGTGATGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000467024.5 ENST00000468420.5 |
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| CDS CCA 72 bp | TCTACCTCTGGGTCCTCAGCATCAATCTGGTTTAGGTaGATGTCTCCTGTCGTGAGCCACTGGAAAACAACA | + |
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Preference number: 6 (lower is better) Translates to: STSGSSASIWFR*MSPVVSHWKTT Trigger: TGTTGTTTTCCAGTGGCTCACGACAGGAGACATCCACCTAAACCAGATTGATGCTGAGGACCCAGAGGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460014.1 |
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| CDS CCA 72 bp | GAAGCAGACAGAACCTGTAGACAGAACCGCCACTGCTaGTTTCATGACACTCAATGTGGCACCAAAAGGATA | + |
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Preference number: 6 (lower is better) Translates to: EADRTCRQNRHC*FHDTQCGTKRI Trigger: TATCCTTTTGGTGCCACATTGAGTGTCATGAAACCAGCAGTGGCGGTTCTGTCTACAGGTTCTGTCTGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000467024.5 |
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| CDS CCA 72 bp | GAAATCTCTGGGTCCTCAGCATCAATCTGGTTTAGGTaGATGTCTCCTGTCGTGAGCCACTGGAAAACAACA | + |
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Preference number: 6 (lower is better) Translates to: EISGSSASIWFR*MSPVVSHWKTT Trigger: TGTTGTTTTCCAGTGGCTCACGACAGGAGACATCCACCTAAACCAGATTGATGCTGAGGACCCAGAGATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000467024.5 ENST00000468420.5 |
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| CDS CAA 72 bp | TCCTCATGTGGCATCAGAAAACACACTCACTGGGCATaGTTTCCACTGCTTTCCTCATCAATGATCCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SSCGIRKHTHWA*FPLLSSSMIPG Trigger: GCCTGGGATCATTGATGAGGAAAGCAGTGGAAACAATGCCCAGTGAGTGTGTTTTCTGATGCCACATGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476986.1 |
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| CDS CAA 90 bp | GATACATCTTCCTCATGTGGCATCAGAAAACACACTCACTGGGCATaGTTTCCACTGCTTTCCTCATCAATGATCCCAGGCACAGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: DTSSSCGIRKHTHWA*FPLLSSSMIPGTAF Trigger: AAAGGCTGTGCCTGGGATCATTGATGAGGAAAGCAGTGGAAACAATGCCCAGTGAGTGTGTTTTCTGATGCCACATGAGGAAGATGTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476986.1 |
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| CDS TCA 72 bp | AATTCCAGGTCTTCTTCAGTACACTTATTGGTAATCTaGGCCAGCCGTGCCTTCTCAGAGGAGAACGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: NSRSSSVHLLVI*ASRAFSEENVS Trigger: TGAAACGTTCTCCTCTGAGAAGGCACGGCTGGCTCAGATTACCAATAAGTGTACTGAAGAAGACCTGGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS TCA 72 bp | CACTTGTATCGATGTCATGTTCACTTATTGGTAATCTaGGCCAGCCGTGCCTTCTCAGAGGAGAACGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: HLYRCHVHLLVI*ASRAFSEENVS Trigger: TGAAACGTTCTCCTCTGAGAAGGCACGGCTGGCTCAGATTACCAATAAGTGAACATGACATCGATACAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461012.1 |
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| CDS CCA 72 bp | CCACCACTTGGAAGAAGACGTGCTCAAGGATATGTTTaGCATCCTGTTGGTCCTTTGGTAGTTTACTGGTTA | + |
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Preference number: 6 (lower is better) Translates to: PPLGRRRAQGYV*HPVGPLVVYWL Trigger: TAACCAGTAAACTACCAAAGGACCAACAGGATGCCAAACATATCCTTGAGCACGTCTTCTTCCAAGTGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000471199.1 |
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| CDS CAA 72 bp | TCCACCACTTGGAAGAAGACGTGCTCAAGGATATGTTaGGCATCCTGTTGGTCCTTTGGTAGTTTACTGGTT | + |
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Preference number: 6 (lower is better) Translates to: STTWKKTCSRIC*ASCWSFGSLLV Trigger: AACCAGTAAACTACCAAAGGACCAACAGGATGCCAAACATATCCTTGAGCACGTCTTCTTCCAAGTGGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000471199.1 |
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| CDS CAA 90 bp | TTCTTGAACTCCACCACTTGGAAGAAGACGTGCTCAAGGATATGTTaGGCATCCTGTTGGTCCTTTGGTAGTTTACTGGTTACTCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: FLNSTTWKKTCSRIC*ASCWSFGSLLVTPR Trigger: TCTTGGAGTAACCAGTAAACTACCAAAGGACCAACAGGATGCCAAACATATCCTTGAGCACGTCTTCTTCCAAGTGGTGGAGTTCAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000471199.1 |
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| CDS CAA 90 bp | TGTATCGATGTCATGTTCCTGGTTCAATTTCTTGAACTCCACCACTaGGAAGAAGACGTGCTCAAGGATATGTTTGGCATCCTGTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: CIDVMFLVQFLELHH*EEDVLKDMFGILLV Trigger: GACCAACAGGATGCCAAACATATCCTTGAGCACGTCTTCTTCCAAGTGGTGGAGTTCAAGAAATTGAACCAGGAACATGACATCGATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000471199.1 |
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| CDS TCA 72 bp | TTCTTTGTCCAAATATTGATCACTGAACATGTGACATaGACCAAGCACTGCCAGCTTCCCACCTTGGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: FFVQILITEHVT*TKHCQLPTLVL Trigger: CAGAACCAAGGTGGGAAGCTGGCAGTGCTTGGTTCATGTCACATGTTCAGTGATCAATATTTGGACAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468420.5 |
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| CDS CCA 72 bp | TCATGTTCCTGGTTCAATTTCTTGAACTCCACCACTTaGAAGAAGACGTGCTCAAGGATATGTTTGGCATCC | + |
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Preference number: 6 (lower is better) Translates to: SCSWFNFLNSTT*KKTCSRICLAS Trigger: GGATGCCAAACATATCCTTGAGCACGTCTTCTTCCAAGTGGTGGAGTTCAAGAAATTGAACCAGGAACATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000471199.1 |
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| CDS CAA 72 bp | GTCATGTTCCTGGTTCAATTTCTTGAACTCCACCACTaGGAAGAAGACGTGCTCAAGGATATGTTTGGCATC | + |
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Preference number: 6 (lower is better) Translates to: VMFLVQFLELHH*EEDVLKDMFGI Trigger: GATGCCAAACATATCCTTGAGCACGTCTTCTTCCAAGTGGTGGAGTTCAAGAAATTGAACCAGGAACATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000471199.1 |
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| CDS TCA 72 bp | TTCTTTGTCCAAATATTGATCACTGAACATGTGACATaGACCAAGCACTGCCAGCTTCCCACCTTGGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: FFVQILITEHVT*TKHCQLPTLVL Trigger: AAGAACCAAGGTGGGAAGCTGGCAGTGCTTGGTTCATGTCACATGTTCAGTGATCAATATTTGGACAAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000460014.1 ENST00000467024.5 |
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| CDS GCA 72 bp | CTTCAAGAGGCATGGTCTTCAGAAATTGTTCTGGAATaGTGTTTCACTTGTATCGATGTCATGTTCCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: LQEAWSSEIVLE*CFTCIDVMFLV Trigger: AACCAGGAACATGACATCGATACAAGTGAAACAGCATTCCAGAACAATTTCTGAAGACCATGCCTCTTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000471199.1 |
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| CDS CCA 72 bp | AAGAAGACGTGCTCAAGGATATGTTTGGCATCCTGTTaGTCCTTTGGTAGTTTACTGGTTACTCCAAGAATA | + |
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Preference number: 6 (lower is better) Translates to: KKTCSRICLASC*SFGSLLVTPRI Trigger: TATTCTTGGAGTAACCAGTAAACTACCAAAGGACCAACAGGATGCCAAACATATCCTTGAGCACGTCTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373030.8 ENST00000373039.4 ENST00000471199.1 |
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| CDS TCA 72 bp | GTTTACTGGTTACTCCAAGAATATCACCACACTTCCTaGCATAAAATTCCAGGTCTTCTTCAGTACCTAAGA | + |
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Preference number: 6 (lower is better) Translates to: VYWLLQEYHHTS*HKIPGLLQYLR Trigger: TCTTAGGTACTGAAGAAGACCTGGAATTTTATGTCAGGAAGTGTGGTGATATTCTTGGAGTAACCAGTAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471199.1 |
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| CDS GCA 72 bp | CTTCAAGAGGCATGGTCTTCAGAAATTGTTCTGGAATaGTGTTTCACTTGTATCGATGTCATGTTCACTTAT | + |
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Preference number: 6 (lower is better) Translates to: LQEAWSSEIVLE*CFTCIDVMFTY Trigger: ATAAGTGAACATGACATCGATACAAGTGAAACAGCATTCCAGAACAATTTCTGAAGACCATGCCTCTTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461012.1 |
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| CDS TCA 72 bp | GTTTACTGGTTACTCCAAGAATATCACCACACTTCCTaGCATAAAATTCCAGGTCTTCTTCAGTACACTTAT | + |
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Preference number: 6 (lower is better) Translates to: VYWLLQEYHHTS*HKIPGLLQYTY Trigger: ATAAGTGTACTGAAGAAGACCTGGAATTTTATGTCAGGAAGTGTGGTGATATTCTTGGAGTAACCAGTAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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| CDS CCA 72 bp | ATAATAAAAGCACTCCTAATCAGAATAAAACTGGACTaGTACTGGCTTTCCTATTCCTCAGATCTAGTATTC | + |
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Preference number: 6 (lower is better) Translates to: IIKALLIRIKLD*YWLSYSSDLVF Trigger: GAATACTAGATCTGAGGAATAGGAAAGCCAGTACCAGTCCAGTTTTATTCTGATTAGGAGTGCTTTTATTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471199.1 |
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| CDS CAA 72 bp | ACCATGATTCCATATTCTTCTAGTAAAAAGTTAATATaGGTGTCAAATCTGGATTCTCCACCTTCTCCTAGC | + |
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Preference number: 6 (lower is better) Translates to: TMIPYSSSKKLI*VSNLDSPPSPS Trigger: GCTAGGAGAAGGTGGAGAATCCAGATTTGACACCAATATTAACTTTTTACTAGAAGAATATGGAATCATGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373030.8 ENST00000373039.4 |
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