RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IFT46 (Homo sapiens)

Ensembl gene IDs: ENSG00000118096

Ensembl transcript IDs: ENST00000264020.6, ENST00000264021.8, ENST00000525060.1, ENST00000527868.1, ENST00000528378.5, ENST00000530185.1, ENST00000530872.5, ENST00000531201.5, ENST00000531939.5, ENST00000533918.5, ENST00000534114.5, ENST00000534156.5, ENST00000672656.2

Found 292 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTaGGCCAAGCTGTGGCATGGGCAAGGACATCAAGTAGCTGACAAC +
Preference number: 1 (lower is better)
Translates to: FCALWQRGQQDMHCP*AKLWHGQGHQVADN
Trigger: GTTGTCAGCTACTTGATGTCCTTGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
3UTR GCA 90 bp GACAGCAATCTGAGGCAGGCAGGTTCATTAAACAAACATGTTCTGTaGCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGC +
Preference number: 1 (lower is better)
Translates to: DSNLRQAGSLNKHVL*PLAERAAGHALPLS
Trigger: GCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGCCTCAGATTGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
3UTR CCA 90 bp TCTCAGCTGGGGCAGAGGGGCCAGCTCAGCCTTGAAACAGCAGCTTaGGAAGTGTCTCAGCTGAAGGTTAATGTCTCCATGTCTCCAGCT +
Preference number: 1 (lower is better)
Translates to: SQLGQRGQLSLETAA*EVSQLKVNVSMSPA
Trigger: AGCTGGAGACATGGAGACATTAACCTTCAGCTGAGACACTTCCCAAGCTGCTGTTTCAAGGCTGAGCTGGCCCCTCTGCCCCAGCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530872.5
3UTR TCA 90 bp GGGGCCAGCTCAGCCTTGAAACAGCAGCTTGGGAAGTGTCTCAGCTaGAGGTTAATGTCTCCATGTCTCCAGCTTGGGAGGTGGAATTGG +
Preference number: 1 (lower is better)
Translates to: GASSALKQQLGKCLS*RLMSPCLQLGRWNW
Trigger: CCAATTCCACCTCCCAAGCTGGAGACATGGAGACATTAACCTTCAGCTGAGACACTTCCCAAGCTGCTGTTTCAAGGCTGAGCTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530872.5
3UTR CCA 90 bp TGGGAAGTGTCTCAGCTGAAGGTTAATGTCTCCATGTCTCCAGCTTaGGAGGTGGAATTGGATGAAGGAGTGAATGCTTTCTTGCCTTCA +
Preference number: 1 (lower is better)
Translates to: WEVSQLKVNVSMSPA*EVELDEGVNAFLPS
Trigger: TGAAGGCAAGAAAGCATTCACTCCTTCATCCAATTCCACCTCCCAAGCTGGAGACATGGAGACATTAACCTTCAGCTGAGACACTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530872.5
3UTR-3UTR TCA 90 bp GCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGCAGGGCCAGCTCAGCCTTaGAACAGCAGCTTGGGAAGT +
Preference number: 2 (lower is better)
Translates to: AERAAGHALPLSQAVAWAGPAQP*NSSLGS
Trigger: ACTTCCCAAGCTGCTGTTTCAAGGCTGAGCTGGCCC...TGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
3UTR-3UTR TCA 90 bp CTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGGGCCAGCTCAGCCTTaGAACAGCAGCTTGGGAAGT +
Preference number: 2 (lower is better)
Translates to: LAERAAGHALPLSQAVAWGPAQP*NSSLGS
Trigger: ACTTCCCAAGCTGCTGTTTCAAGGCTGAGCTGGCCC...CCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
3UTR-3UTR TCA 90 bp GTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAAGGACATCAAGTAGCTaGCAACGATCTGTCCATCTC +
Preference number: 2 (lower is better)
Translates to: VLCPLAERAAGHALPLSQRTSSS*QRSVHL
Trigger: GAGATGGACAGATCGTTGTCAGCTACTTGATGTCCT...TTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
3UTR-3UTR TCA 90 bp CTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGAATTGGATGAAGGAGTaGATGCTTTCTTGCCTTCAG +
Preference number: 2 (lower is better)
Translates to: LAERAAGHALPLSQAVAWNWMKE*MLSCLQ
Trigger: CTGAAGGCAAGAAAGCATTCACTCCTTCATCCAATT...CCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530872.5
3UTR-3UTR TCA 90 bp GCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGAGGGCCAGCTCAGCCTTaGAACAGCAGCTTGGGAAGT +
Preference number: 2 (lower is better)
Translates to: AGSLNKHVLCPLAERAAGGPAQP*NSSLGS
Trigger: ACTTCCCAAGCTGCTGTTTCAAGGCTGAGCTGGCCC...TCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
3UTR-3UTR CCA 90 bp AGGCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAAGCCAAGCTGTGGCATaGGCAAGGACATCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: RQAGSLNKHVLCPLAERASQAVA*ARTSSS
Trigger: GCTACTTGATGTCCTTGCCCATGCCACAGCTTGGCT...TGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
3UTR-3UTR CCA 90 bp GTAGATGCATTAACTCCCCGGGGACAGCAATCTGAGGCAGGCAGGTTCATTAAAAGCCAAGCTGTGGCATaGGCAAGGACATCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: VDALTPRGQQSEAGRFIKSQAVA*ARTSSS
Trigger: GCTACTTGATGTCCTTGCCCATGCCACAGCTTGGCT...TTTAATGAACCTGCCTGCCTCAGATTGCTGTCCCCGGGGAGTTAATGCATCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
3UTR-3UTR GCA 90 bp CTTTTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCGAGGGCAGCAGGACATaGACTGCCCCTGAGCCAAGC +
Preference number: 2 (lower is better)
Translates to: LLSFPPNLTSMGSQKFQFEGSRT*TAPEPS
Trigger: GCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTC...GAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
3UTR-3UTR TCA 90 bp GGACATCTTTTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCGGGCCAGCTCAGCCTTaGAACAGCAGCTTGGGAAGT +
Preference number: 2 (lower is better)
Translates to: GHLLSFPPNLTSMGSQKFGPAQP*NSSLGS
Trigger: ACTTCCCAAGCTGCTGTTTCAAGGCTGAGCTGGCCC...GAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAAAAGATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
3UTR-3UTR TCA 90 bp TCTGAGGCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGGAAGTGTCTCAGCTaGAGGTTAATGTCTCCATGT +
Preference number: 2 (lower is better)
Translates to: SEAGRFIKQTCSVPSGREGKCLS*RLMSPC
Trigger: ACATGGAGACATTAACCTTCAGCTGAGACACTTCCC...CTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGCCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530872.5
3UTR-3UTR GCA 90 bp CTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTGAGGGCAGCAGGACATaGACTGCCCCTGAGCCAAGC +
Preference number: 2 (lower is better)
Translates to: LSSQSNLHGISEIPILITEGSRT*TAPEPS
Trigger: GCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTC...AGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
3UTR-3UTR CCA 90 bp GTAGATGCATTAACTCCCCGGGGACAGCAATCTGAGGCAGGCAGGTTCATTAAACTCAAATCCCCACAGTaGTGTAGATGCATTAACTCC +
Preference number: 2 (lower is better)
Translates to: VDALTPRGQQSEAGRFIKLKSPQ*CRCINS
Trigger: GGAGTTAATGCATCTACACCACTGTGGGGATTTGAG...TTTAATGAACCTGCCTGCCTCAGATTGCTGTCCCCGGGGAGTTAATGCATCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
3UTR-3UTR GCA 90 bp GGACATCTTTTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCAACAAACATGTTCTGTaGCCTCTGGCAGAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: GHLLSFPPNLTSMGSQKFNKHVL*PLAERA
Trigger: TGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTT...GAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAAAAGATGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
3UTR-3UTR GCA 90 bp CCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTGTACCACAGTGGTGTAGATaGATTAACTCCCCGGGGACA +
Preference number: 2 (lower is better)
Translates to: PWDLRNSNSYNSNPHSGVPQWCR*INSPGT
Trigger: TGTCCCCGGGGAGTTAATGCATCTACACCACTGTGG...TACACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
3UTR-3UTR CCA 90 bp CTTTTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCAGCCAAGCTGTGGCATaGGCAAGGACATCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: LLSFPPNLTSMGSQKFQFSQAVA*ARTSSS
Trigger: GCTACTTGATGTCCTTGCCCATGCCACAGCTTGGCT...GAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
3UTR-3UTR GCA 90 bp CCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTGTAAACAAACATGTTCTGTaGCCTCTGGCAGAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: PWDLRNSNSYNSNPHSGVNKHVL*PLAERA
Trigger: TGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTT...TACACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
3UTR-3UTR CCA 90 bp CTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTAGCCAAGCTGTGGCATaGGCAAGGACATCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: LSSQSNLHGISEIPILITSQAVA*ARTSSS
Trigger: GCTACTTGATGTCCTTGCCCATGCCACAGCTTGGCT...AGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
3UTR-3UTR CCA 90 bp GGACATCTTTTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCTCCATGTCTCCAGCTTaGGAGGTGGAATTGGATGAA +
Preference number: 2 (lower is better)
Translates to: GHLLSFPPNLTSMGSQKFSMSPA*EVELDE
Trigger: TTCATCCAATTCCACCTCCCAAGCTGGAGACATGGA...GAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAAAAGATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530872.5
3UTR-3UTR TCA 90 bp AACCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGGAGGTGGAATTGGATaGAGGAGTGAATGCTTTCTT +
Preference number: 2 (lower is better)
Translates to: NLHGISEIPILITQIPTVGGGIG*RSECFL
Trigger: AAGAAAGCATTCACTCCTTCATCCAATTCCACCTCC...CACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530872.5
3UTR-3UTR CCA 90 bp CTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCTTGAAACAGCAGCTTaGGAAGTGTCTCAGCTGAAG +
Preference number: 2 (lower is better)
Translates to: LSSQSNLHGISEIPILITLETAA*EVSQLK
Trigger: CTTCAGCTGAGACACTTCCCAAGCTGCTGTTTCAAG...AGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530872.5
3UTR GCA 72 bp TGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATaGACTGCCCCTGAGCCAAGCTGTGGCATGGGCAAG +
Preference number: 3 (lower is better)
Translates to: CSVPSGREGSRT*TAPEPSCGMGK
Trigger: CTTGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
3UTR GCA 72 bp CTGAGGCAGGCAGGTTCATTAAACAAACATGTTCTGTaGCCTCTGGCAGAGAGGGCAGCAGGACATGCACTG +
Preference number: 3 (lower is better)
Translates to: LRQAGSLNKHVL*PLAERAAGHAL
Trigger: CAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
3UTR-3UTR CAA 90 bp GCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCGCTTGGGAGGTGGAATaGGATGAAGGAGTGAATGCT +
Preference number: 3 (lower is better)
Translates to: AGRFIKQTCSVPSGREGSAWEVE*DEGVNA
Trigger: AGCATTCACTCCTTCATCCAATTCCACCTCCCAAGC...GCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530872.5
3UTR TCA 72 bp TGTCTCCATGTCTCCAGCTTGGGAGGTGGAATTGGATaGAGGAGTGAATGCTTTCTTGCCTTCAGCGAGAGC +
Preference number: 3 (lower is better)
Translates to: CLHVSSLGGGIG*RSECFLAFSES
Trigger: GCTCTCGCTGAAGGCAAGAAAGCATTCACTCCTTCATCCAATTCCACCTCCCAAGCTGGAGACATGGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530872.5
3UTR TCA 72 bp TCAGCCTTGAAACAGCAGCTTGGGAAGTGTCTCAGCTaGAGGTTAATGTCTCCATGTCTCCAGCTTGGGAGG +
Preference number: 3 (lower is better)
Translates to: SALKQQLGKCLS*RLMSPCLQLGR
Trigger: CCTCCCAAGCTGGAGACATGGAGACATTAACCTTCAGCTGAGACACTTCCCAAGCTGCTGTTTCAAGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530872.5
CDS-3UTR CCA 90 bp CTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGTGTCGGGCATGGGCCTaGTGTAGTGCACAGTCGCAG +
Preference number: 4 (lower is better)
Translates to: LAERAAGHALPLSQAVAWCRAWA*CSAQSQ
Trigger: CTGCGACTGTGCACTACACCAGGCCCATGCCCGACA...CCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp CTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTTTTGCCTCTGTGGCCTaGAGCCTGTGGCATGCCCTC +
Preference number: 4 (lower is better)
Translates to: LCPLAERAAGHALPLSQAFASVA*SLWHAL
Trigger: GAGGGCATGCCACAGGCTCCAGGCCACAGAGGCAAA...AGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264020.6
ENST00000530872.5
CDS-3UTR CCA 90 bp CATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCTGTCGGGCATGGGCCTaGTGTAGTGCACAGTCGCAG +
Preference number: 4 (lower is better)
Translates to: HVLCPLAERAAGHALPLSCRAWA*CSAQSQ
Trigger: CTGCGACTGTGCACTACACCAGGCCCATGCCCGACA...GCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp GTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGGGCCAGCTCAGCCTTaGAACAGCAGCTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: VLCPLAERAAGHALPLSQGPAQP*NSSLGS
Trigger: ACTTCCCAAGCTGCTGTTTCAAGGCTGAGCTGGCCC...TTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp CTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGTTGCTTCCACTCTCGTaGGACCTCCTGCGCGTTAAG +
Preference number: 4 (lower is better)
Translates to: LAERAAGHALPLSQAVAWLLPLS*DLLRVK
Trigger: CTTAACGCGCAGGAGGTCTCACGAGAGTGGAAGCAA...CCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264020.6
CDS-3UTR GCA 90 bp AGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGCAAGCAGGGTCCATGTCTTTaGCTCTGTGGCCTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: REGSRTCTAPEPSCGMGKQGPCL*LCGLEP
Trigger: AGGCTCCAGGCCACAGAGGCAAAGACATGGACCCTG...CTTGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264020.6
ENST00000530872.5
CDS-3UTR CCA 90 bp CTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGTGTCAATGTCGGGCATaGGCCTGGTGTAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: LAERAAGHALPLSQAVAWCQCRA*AWCSAQ
Trigger: CTGTGCACTACACCAGGCCCATGCCCGACATTGACA...CCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp GCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGCATCACTAAAGCCCCGTTaGGGTGTCAACTGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: AERAAGHALPLSQAVAWASLKPR*GVNCEV
Trigger: GACCTCACAGTTGACACCTCAACGGGGCTTTAGTGA...TGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp TCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCGCTGCAATCAATCTCTaGCGTGGGCAGGCTTACCTT +
Preference number: 4 (lower is better)
Translates to: SVPSGREGSRTCTAPEPSAAINL*RGQAYL
Trigger: AAGGTAAGCCTGCCCACGGCAGAGATTGATTGCAGC...GCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp CTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGCTGCAATCAATCTCTaGCGTGGGCAGGCTTACCTT +
Preference number: 4 (lower is better)
Translates to: LAERAAGHALPLSQAVAWAAINL*RGQAYL
Trigger: AAGGTAAGCCTGCCCACGGCAGAGATTGATTGCAGC...CCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp CTGACAACGATCTGTCCATCTCAGCTGGGGCAGAGGGGCCAGCTCAGCCTTGAATGTCGGGCATGGGCCTaGTGTAGTGCACAGTCGCAG +
Preference number: 4 (lower is better)
Translates to: LTTICPSQLGQRGQLSLECRAWA*CSAQSQ
Trigger: CTGCGACTGTGCACTACACCAGGCCCATGCCCGACA...TTCAAGGCTGAGCTGGCCCCTCTGCCCCAGCTGAGATGGACAGATCGTTGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp GCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGCAAATCAATCTCTGCCGTaGGCAGGCTTACCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: AERAAGHALPLSQAVAWANQSLP*AGLPCP
Trigger: TGGGCAAGGTAAGCCTGCCCACGGCAGAGATTGATT...TGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp TCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCAGGGAAAAGAGCAGATaGAGGGACTGGATCCGACTC +
Preference number: 4 (lower is better)
Translates to: SVPSGREGSRTCTAPEPSREKSR*RDWIRL
Trigger: GAGTCGGATCCAGTCCCTCCATCTGCTCTTTTCCCT...GCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000672656.2
CDS-3UTR CCA 90 bp GCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGCAAGCCAAGCTGTGGCATaGGCAAGGACATCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: AERAAGHALPLSQAVAWASQAVA*ARTSSS
Trigger: GCTACTTGATGTCCTTGCCCATGCCACAGCTTGGCT...TGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp CTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTACTTGCAGGGGCAGGTaGAACAGGGTCCATGTCTTT +
Preference number: 4 (lower is better)
Translates to: LCPLAERAAGHALPLSQATCRGR*NRVHVF
Trigger: AAAGACATGGACCCTGTTCCACCTGCCCCTGCAAGT...AGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264020.6
ENST00000530872.5
CDS-3UTR TCA 90 bp CATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCTCACTAAAGCCCCGTTaGGGTGTCAACTGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: HVLCPLAERAAGHALPLSSLKPR*GVNCEV
Trigger: GACCTCACAGTTGACACCTCAACGGGGCTTTAGTGA...GCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp CTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTAACAAACATGTTCTGTaGCCTCTGGCAGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LCPLAERAAGHALPLSQANKHVL*PLAERA
Trigger: TGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTT...AGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp AGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGCAAGCCACAGTGGTGTAGATaGATTAACTCCCCGGGGACA +
Preference number: 4 (lower is better)
Translates to: REGSRTCTAPEPSCGMGKPQWCR*INSPGT
Trigger: TGTCCCCGGGGAGTTAATGCATCTACACCACTGTGG...CTTGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp TCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCGCCTTGTTAGGAAGATaGGCAGAACGAGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: SVPSGREGSRTCTAPEPSALLGR*AERGSP
Trigger: AGGACTTCCTCGTTCTGCCCATCTTCCTAACAAGGC...GCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp GTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAAGCCAAGCTGTGGCATaGGCAAGGACATCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: VLCPLAERAAGHALPLSQSQAVA*ARTSSS
Trigger: GCTACTTGATGTCCTTGCCCATGCCACAGCTTGGCT...TTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp CTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGTCCAGAGGGGCTCCATaGTCTTCATCATCATCATCA +
Preference number: 4 (lower is better)
Translates to: LAERAAGHALPLSQAVAWSRGAP*SSSSSS
Trigger: TGATGATGATGATGAAGAGCATGGAGCCCCTCTGGA...CCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp CTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTACCGTAGGGTCTGACTaGTTTGTAGAAGGTTCATCC +
Preference number: 4 (lower is better)
Translates to: LCPLAERAAGHALPLSQATVGSD*FVEGSS
Trigger: GGATGAACCTTCTACAAAGCAGTCAGACCCTACGGT...AGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp CTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGACCGTAGGGTCTGACTaGTTTGTAGAAGGTTCATCC +
Preference number: 4 (lower is better)
Translates to: LAERAAGHALPLSQAVAWTVGSD*FVEGSS
Trigger: GGATGAACCTTCTACAAAGCAGTCAGACCCTACGGT...CCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp CATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCGAACGAGGAAGTCCTTaGTGTCTTGGGGTTGGAGTA +
Preference number: 4 (lower is better)
Translates to: HVLCPLAERAAGHALPLSERGSP*CLGVGV
Trigger: TACTCCAACCCCAAGACACCAAGGACTTCCTCGTTC...GCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp GTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCCTTGTTAGGAAGATaGGCAGAACGAGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: VLCPLAERAAGHALPLSQALLGR*AERGSP
Trigger: AGGACTTCCTCGTTCTGCCCATCTTCCTAACAAGGC...TTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp TCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCCTTGAAACAGCAGCTTaGGAAGTGTCTCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SVPSGREGSRTCTAPEPSLETAA*EVSQLK
Trigger: CTTCAGCTGAGACACTTCCCAAGCTGCTGTTTCAAG...GCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp CATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCTCCAGGTCAATCAACTaGGGTGTGTACCTACTGATG +
Preference number: 4 (lower is better)
Translates to: HVLCPLAERAAGHALPLSSRSIN*GVYLLM
Trigger: CATCAGTAGGTACACACCTCAGTTGATTGACCTGGA...GCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp CTGTGGCATGGGCAAGGACATCAAGTAGCTGACAACGATCTGTCCATCTCAGCTGGGTCTGGTGGCACTTaGGACTTGCAGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LWHGQGHQVADNDLSISAGSGGT*DLQGQV
Trigger: CACCTGCCCCTGCAAGTCTCAAGTGCCACCAGACCC...AGCTGAGATGGACAGATCGTTGTCAGCTACTTGATGTCCTTGCCCATGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264020.6
ENST00000530872.5
CDS-3UTR GCA 90 bp AGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGCAAGACCGTAGGGTCTGACTaGTTTGTAGAAGGTTCATCC +
Preference number: 4 (lower is better)
Translates to: REGSRTCTAPEPSCGMGKTVGSD*FVEGSS
Trigger: GGATGAACCTTCTACAAAGCAGTCAGACCCTACGGT...CTTGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp CTGTGGCATGGGCAAGGACATCAAGTAGCTGACAACGATCTGTCCATCTCAGCTGAGGGCAGCAGGACATaGACTGCCCCTGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: LWHGQGHQVADNDLSISAEGSRT*TAPEPS
Trigger: GCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTC...AGCTGAGATGGACAGATCGTTGTCAGCTACTTGATGTCCTTGCCCATGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp CTGACAACGATCTGTCCATCTCAGCTGGGGCAGAGGGGCCAGCTCAGCCTTGAAAGGGAAAAGAGCAGATaGAGGGACTGGATCCGACTC +
Preference number: 4 (lower is better)
Translates to: LTTICPSQLGQRGQLSLEREKSR*RDWIRL
Trigger: GAGTCGGATCCAGTCCCTCCATCTGCTCTTTTCCCT...TTCAAGGCTGAGCTGGCCCCTCTGCCCCAGCTGAGATGGACAGATCGTTGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000672656.2
CDS-3UTR CCA 90 bp GTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAACTTGAAACAGCAGCTTaGGAAGTGTCTCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VLCPLAERAAGHALPLSQLETAA*EVSQLK
Trigger: CTTCAGCTGAGACACTTCCCAAGCTGCTGTTTCAAG...TTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp GCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGCACTCAAATCCCCACAGTaGTGTAGATGCATTAACTCC +
Preference number: 4 (lower is better)
Translates to: AERAAGHALPLSQAVAWALKSPQ*CRCINS
Trigger: GGAGTTAATGCATCTACACCACTGTGGGGATTTGAG...TGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp GCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGCAAATTGGATGAAGGAGTaGATGCTTTCTTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: AERAAGHALPLSQAVAWANWMKE*MLSCLQ
Trigger: CTGAAGGCAAGAAAGCATTCACTCCTTCATCCAATT...TGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp CATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCATGTCAATGTACTCTaGCAGGCTGCAATCAATCTC +
Preference number: 4 (lower is better)
Translates to: HVLCPLAERAAGHALPLSHVNVL*QAAINL
Trigger: GAGATTGATTGCAGCCTGGCAGAGTACATTGACATG...GCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp TCTGAGGCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGAGGGCAGCAGGACATaGACTGCCCCTGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: SEAGRFIKQTCSVPSGREEGSRT*TAPEPS
Trigger: GCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTC...CTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp GCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGCACGCTCATCATATGTCTaGTTTTCAACAACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: AERAAGHALPLSQAVAWARSSYV*FSTTLV
Trigger: GACCAAGGTTGTTGAAAACCAGACATATGATGAGCG...TGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp GCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGCACAATCCACGTGTCAATaGCTTTGGGATTCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: AERAAGHALPLSQAVAWAQSTCQ*LWDSFL
Trigger: CAGAAAAGAATCCCAAAGCCATTGACACGTGGATTG...TGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp TCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCCAGGGATGTCTAGAATaGCACAGATCATGTCAATGT +
Preference number: 4 (lower is better)
Translates to: SVPSGREGSRTCTAPEPSQGCLE*HRSCQC
Trigger: ACATTGACATGATCTGTGCCATTCTAGACATCCCTG...GCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000672656.2
CDS-3UTR CCA 90 bp CATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCTCAAATCCCCACAGTaGTGTAGATGCATTAACTCC +
Preference number: 4 (lower is better)
Translates to: HVLCPLAERAAGHALPLSLKSPQ*CRCINS
Trigger: GGAGTTAATGCATCTACACCACTGTGGGGATTTGAG...GCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp GCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGATTTGCCTCTGTGGCCTaGAGCCTGTGGCATGCCCTC +
Preference number: 4 (lower is better)
Translates to: AGSLNKHVLCPLAERAAGFASVA*SLWHAL
Trigger: GAGGGCATGCCACAGGCTCCAGGCCACAGAGGCAAA...TCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264020.6
ENST00000530872.5
CDS-3UTR TCA 90 bp CTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGAATGCTGTGAGTTCTTaGATTCTGAGTAGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LAERAAGHALPLSQAVAWNAVSS*ILSRGK
Trigger: TTTCCCTCTACTCAGAATTCAAGAACTCACAGCATT...CCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000672656.2
CDS-3UTR GCA 90 bp CTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGTGGAGTATAAATACTTaGAACCTCTTCGGAGTCGTT +
Preference number: 4 (lower is better)
Translates to: LAERAAGHALPLSQAVAWWSINT*NLFGVV
Trigger: AACGACTCCGAAGAGGTTGCAAGTATTTATACTCCA...CCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp AAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCACAGTGGTGTAGATaGATTAACTCCCCGGGGACA +
Preference number: 4 (lower is better)
Translates to: KQTCSVPSGREGSRTCTAPQWCR*INSPGT
Trigger: TGTCCCCGGGGAGTTAATGCATCTACACCACTGTGG...GGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp GTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAACAATCCACGTGTCAATaGCTTTGGGATTCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: VLCPLAERAAGHALPLSQQSTCQ*LWDSFL
Trigger: CAGAAAAGAATCCCAAAGCCATTGACACGTGGATTG...TTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp AAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCAGCCAAGCTGTGGCATaGGCAAGGACATCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: KQTCSVPSGREGSRTCTASQAVA*ARTSSS
Trigger: GCTACTTGATGTCCTTGCCCATGCCACAGCTTGGCT...GGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp GCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCTCACTAAAGCCCCGTTaGGGTGTCAACTGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: AGRFIKQTCSVPSGREGSSLKPR*GVNCEV
Trigger: GACCTCACAGTTGACACCTCAACGGGGCTTTAGTGA...GCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp AGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGCAAGAATGCTGTGAGTTCTTaGATTCTGAGTAGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: REGSRTCTAPEPSCGMGKNAVSS*ILSRGK
Trigger: TTTCCCTCTACTCAGAATTCAAGAACTCACAGCATT...CTTGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000672656.2
CDS-3UTR TCA 90 bp ACAGCAGCTTGGGAAGTGTCTCAGCTGAAGGTTAATGTCTCCATGTCTCCAGCTGGGCCAGCTCAGCCTTaGAACAGCAGCTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: TAAWEVSQLKVNVSMSPAGPAQP*NSSLGS
Trigger: ACTTCCCAAGCTGCTGTTTCAAGGCTGAGCTGGCCC...AGCTGGAGACATGGAGACATTAACCTTCAGCTGAGACACTTCCCAAGCTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530872.5
CDS-3UTR GCA 90 bp AAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCAAATGCTCATAGTCTaGAGGGTCATAGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: KQTCSVPSGREGSRTCTAQMLIV*RVIGPF
Trigger: GAAGGGGCCTATGACCCTGCAGACTATGAGCATTTG...GGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp CTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTTGTTGTGTGATGTTGTaGTGCTTAGAATTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LCPLAERAAGHALPLSQACCVML*CLEFSV
Trigger: AACAGAGAATTCTAAGCAGCACAACATCACACAACA...AGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp GCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGATCCGGGGACCATTCCTaGATCAGCGTGTCAATGTCG +
Preference number: 4 (lower is better)
Translates to: AGSLNKHVLCPLAERAAGSGDHS*ISVSMS
Trigger: CGACATTGACACGCTGATGCAGGAATGGTCCCCGGA...TCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp GCCAAGCTGTGGCATGGGCAAGGACATCAAGTAGCTGACAACGATCTGTCCATCGCTGCAATCAATCTCTaGCGTGGGCAGGCTTACCTT +
Preference number: 4 (lower is better)
Translates to: AKLWHGQGHQVADNDLSIAAINL*RGQAYL
Trigger: AAGGTAAGCCTGCCCACGGCAGAGATTGATTGCAGC...GATGGACAGATCGTTGTCAGCTACTTGATGTCCTTGCCCATGCCACAGCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp GGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATCAGGGTCCATGTCTTTaGCTCTGTGGCCTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GSLNKHVLCPLAERAAGHQGPCL*LCGLEP
Trigger: AGGCTCCAGGCCACAGAGGCAAAGACATGGACCCTG...ATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264020.6
ENST00000530872.5
CDS-3UTR CCA 90 bp AAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCGCCTTGTTAGGAAGATaGGCAGAACGAGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: KQTCSVPSGREGSRTCTAALLGR*AERGSP
Trigger: AGGACTTCCTCGTTCTGCCCATCTTCCTAACAAGGC...GGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp AGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGCAAGAATATCCCCGACAGCTaGGATAAAATCAGGAATGAA +
Preference number: 4 (lower is better)
Translates to: REGSRTCTAPEPSCGMGKNIPDS*DKIRNE
Trigger: TTCATTCCTGATTTTATCCCAGCTGTCGGGGATATT...CTTGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp CTGACAACGATCTGTCCATCTCAGCTGGGGCAGAGGGGCCAGCTCAGCCTTGAACTCAAATCCCCACAGTaGTGTAGATGCATTAACTCC +
Preference number: 4 (lower is better)
Translates to: LTTICPSQLGQRGQLSLELKSPQ*CRCINS
Trigger: GGAGTTAATGCATCTACACCACTGTGGGGATTTGAG...TTCAAGGCTGAGCTGGCCCCTCTGCCCCAGCTGAGATGGACAGATCGTTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp GCTTGGGAAGTGTCTCAGCTGAAGGTTAATGTCTCCATGTCTCCAGCTTGGGAGATGTCTTTGCCTCTGTaGCCTGGAGCCTGTGGCATG +
Preference number: 4 (lower is better)
Translates to: AWEVSQLKVNVSMSPAWEMSLPL*PGACGM
Trigger: CATGCCACAGGCTCCAGGCCACAGAGGCAAAGACAT...CTCCCAAGCTGGAGACATGGAGACATTAACCTTCAGCTGAGACACTTCCCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530872.5
CDS-3UTR TCA 90 bp CTGTGGCATGGGCAAGGACATCAAGTAGCTGACAACGATCTGTCCATCTCAGCTGAGCACCGTAGGGTCTaGCTGCTTTGTAGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: LWHGQGHQVADNDLSISAEHRRV*LLCRRF
Trigger: GAACCTTCTACAAAGCAGTCAGACCCTACGGTGCTC...AGCTGAGATGGACAGATCGTTGTCAGCTACTTGATGTCCTTGCCCATGCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp GCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCCAAATGCTCATAGTCTaGAGGGTCATAGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: AGRFIKQTCSVPSGREGSQMLIV*RVIGPF
Trigger: GAAGGGGCCTATGACCCTGCAGACTATGAGCATTTG...GCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp CATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCTGTGTGATGTTGTGCTaGTTAGAATTCTCTGTTAAC +
Preference number: 4 (lower is better)
Translates to: HVLCPLAERAAGHALPLSCVMLC*LEFSVN
Trigger: GTTAACAGAGAATTCTAAGCAGCACAACATCACACA...GCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp AGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGCAAGTGTTGTGTGATGTTGTaGTGCTTAGAATTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: REGSRTCTAPEPSCGMGKCCVML*CLEFSV
Trigger: AACAGAGAATTCTAAGCAGCACAACATCACACAACA...CTTGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp TCTGAGGCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGTCCGGGGACCATTCCTaGATCAGCGTGTCAATGTCG +
Preference number: 4 (lower is better)
Translates to: SEAGRFIKQTCSVPSGRESGDHS*ISVSMS
Trigger: CGACATTGACACGCTGATGCAGGAATGGTCCCCGGA...CTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp CTGTGGCATGGGCAAGGACATCAAGTAGCTGACAACGATCTGTCCATCTCAGCTCCACAGTGGTGTAGATaGATTAACTCCCCGGGGACA +
Preference number: 4 (lower is better)
Translates to: LWHGQGHQVADNDLSISAPQWCR*INSPGT
Trigger: TGTCCCCGGGGAGTTAATGCATCTACACCACTGTGG...AGCTGAGATGGACAGATCGTTGTCAGCTACTTGATGTCCTTGCCCATGCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp GCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGAAATCAATCTCTGCCGTaGGCAGGCTTACCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: AGSLNKHVLCPLAERAAGNQSLP*AGLPCP
Trigger: TGGGCAAGGTAAGCCTGCCCACGGCAGAGATTGATT...TCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp CTGTGGCATGGGCAAGGACATCAAGTAGCTGACAACGATCTGTCCATCTCAGCTAGGGAAAAGAGCAGATaGAGGGACTGGATCCGACTC +
Preference number: 4 (lower is better)
Translates to: LWHGQGHQVADNDLSISAREKSR*RDWIRL
Trigger: GAGTCGGATCCAGTCCCTCCATCTGCTCTTTTCCCT...AGCTGAGATGGACAGATCGTTGTCAGCTACTTGATGTCCTTGCCCATGCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000672656.2
CDS-3UTR CCA 90 bp AAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCTTGAAACAGCAGCTTaGGAAGTGTCTCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: KQTCSVPSGREGSRTCTALETAA*EVSQLK
Trigger: CTTCAGCTGAGACACTTCCCAAGCTGCTGTTTCAAG...GGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp TTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCATGTCTTTGCCTCTGTaGCCTGGAGCCTGTGGCATG +
Preference number: 4 (lower is better)
Translates to: FIKQTCSVPSGREGSRTCMSLPL*PGACGM
Trigger: CATGCCACAGGCTCCAGGCCACAGAGGCAAAGACAT...GCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264020.6
ENST00000530872.5
CDS-3UTR CCA 90 bp GCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCTCCTTTCTGTGCTTCTaGCTCTCTCTGTACCATCCC +
Preference number: 4 (lower is better)
Translates to: AGRFIKQTCSVPSGREGSSFLCF*LSLYHP
Trigger: GGGATGGTACAGAGAGAGCCAGAAGCACAGAAAGGA...GCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264020.6
ENST00000530872.5
CDS-3UTR TCA 90 bp GGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGAGCACCGTAGGGTCTaGCTGCTTTGTAGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: GSLNKHVLCPLAERAAGHEHRRV*LLCRRF
Trigger: GAACCTTCTACAAAGCAGTCAGACCCTACGGTGCTC...ATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp TTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCGAGCACCGTAGGGTCTaGCTGCTTTGTAGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: FIKQTCSVPSGREGSRTCEHRRV*LLCRRF
Trigger: GAACCTTCTACAAAGCAGTCAGACCCTACGGTGCTC...GCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp CCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTGGGTCTGGTGGCACTTaGGACTTGCAGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PPWDLRNSNSYNSNPHSGGSGGT*DLQGQV
Trigger: CACCTGCCCCTGCAAGTCTCAAGTGCCACCAGACCC...ACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264020.6
ENST00000530872.5
CDS-3UTR GCA 90 bp AGGCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCACAAATGCTCATAGTCTaGAGGGTCATAGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RQAGSLNKHVLCPLAERAQMLIV*RVIGPF
Trigger: GAAGGGGCCTATGACCCTGCAGACTATGAGCATTTG...TGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp GCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGAGAACGAGGAAGTCCTTaGTGTCTTGGGGTTGGAGTA +
Preference number: 4 (lower is better)
Translates to: AGSLNKHVLCPLAERAAGERGSP*CLGVGV
Trigger: TACTCCAACCCCAAGACACCAAGGACTTCCTCGTTC...TCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp AGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGCAAGTACCTACTGATGTACTaGAAGAGTTCCTTAATTTCA +
Preference number: 4 (lower is better)
Translates to: REGSRTCTAPEPSCGMGKYLLMY*KSSLIS
Trigger: TGAAATTAAGGAACTCTTCCAGTACATCAGTAGGTA...CTTGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp GCCAAGCTGTGGCATGGGCAAGGACATCAAGTAGCTGACAACGATCTGTCCATCTCCATGTCTCCAGCTTaGGAGGTGGAATTGGATGAA +
Preference number: 4 (lower is better)
Translates to: AKLWHGQGHQVADNDLSISMSPA*EVELDE
Trigger: TTCATCCAATTCCACCTCCCAAGCTGGAGACATGGA...GATGGACAGATCGTTGTCAGCTACTTGATGTCCTTGCCCATGCCACAGCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp GCCAAGCTGTGGCATGGGCAAGGACATCAAGTAGCTGACAACGATCTGTCCATCCTTGAAACAGCAGCTTaGGAAGTGTCTCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: AKLWHGQGHQVADNDLSILETAA*EVSQLK
Trigger: CTTCAGCTGAGACACTTCCCAAGCTGCTGTTTCAAG...GATGGACAGATCGTTGTCAGCTACTTGATGTCCTTGCCCATGCCACAGCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp AGGCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGGGAAGTGTCTCAGCTaGAGGTTAATGTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: RQAGSLNKHVLCPLAERAGKCLS*RLMSPC
Trigger: ACATGGAGACATTAACCTTCAGCTGAGACACTTCCC...TGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp AGGCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAACCGTAGGGTCTGACTaGTTTGTAGAAGGTTCATCC +
Preference number: 4 (lower is better)
Translates to: RQAGSLNKHVLCPLAERATVGSD*FVEGSS
Trigger: GGATGAACCTTCTACAAAGCAGTCAGACCCTACGGT...TGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp CTGACAACGATCTGTCCATCTCAGCTGGGGCAGAGGGGCCAGCTCAGCCTTGAATGTGTGATGTTGTGCTaGTTAGAATTCTCTGTTAAC +
Preference number: 4 (lower is better)
Translates to: LTTICPSQLGQRGQLSLECVMLC*LEFSVN
Trigger: GTTAACAGAGAATTCTAAGCAGCACAACATCACACA...TTCAAGGCTGAGCTGGCCCCTCTGCCCCAGCTGAGATGGACAGATCGTTGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp GCCAAGCTGTGGCATGGGCAAGGACATCAAGTAGCTGACAACGATCTGTCCATCCATGTCAATGTACTCTaGCAGGCTGCAATCAATCTC +
Preference number: 4 (lower is better)
Translates to: AKLWHGQGHQVADNDLSIHVNVL*QAAINL
Trigger: GAGATTGATTGCAGCCTGGCAGAGTACATTGACATG...GATGGACAGATCGTTGTCAGCTACTTGATGTCCTTGCCCATGCCACAGCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp AACCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGAGGGCAGCAGGACATaGACTGCCCCTGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: NLHGISEIPILITQIPTVEGSRT*TAPEPS
Trigger: GCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTC...CACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp TCTGAGGCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGAACAAACATGTTCTGTaGCCTCTGGCAGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SEAGRFIKQTCSVPSGRENKHVL*PLAERA
Trigger: TGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTT...CTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGCCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp AAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCGCTCATCATATGTCTaGTTTTCAACAACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: KQTCSVPSGREGSRTCTARSSYV*FSTTLV
Trigger: GACCAAGGTTGTTGAAAACCAGACATATGATGAGCG...GGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp TTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCGAACGAGGAAGTCCTTaGTGTCTTGGGGTTGGAGTA +
Preference number: 4 (lower is better)
Translates to: FIKQTCSVPSGREGSRTCERGSP*CLGVGV
Trigger: TACTCCAACCCCAAGACACCAAGGACTTCCTCGTTC...GCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp GGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCCTTGTTAGGAAGATaGGCAGAACGAGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GSLNKHVLCPLAERAAGHALLGR*AERGSP
Trigger: AGGACTTCCTCGTTCTGCCCATCTTCCTAACAAGGC...ATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp GCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGATCCATGTCTCCAGCTTaGGAGGTGGAATTGGATGAA +
Preference number: 4 (lower is better)
Translates to: AGSLNKHVLCPLAERAAGSMSPA*EVELDE
Trigger: TTCATCCAATTCCACCTCCCAAGCTGGAGACATGGA...TCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp TCTGAGGCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGTCCAGGTCAATCAACTaGGGTGTGTACCTACTGATG +
Preference number: 4 (lower is better)
Translates to: SEAGRFIKQTCSVPSGRESRSIN*GVYLLM
Trigger: CATCAGTAGGTACACACCTCAGTTGATTGACCTGGA...CTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGCCTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp AGGCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGGAGGTGGAATTGGATaGAGGAGTGAATGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: RQAGSLNKHVLCPLAERAGGGIG*RSECFL
Trigger: AAGAAAGCATTCACTCCTTCATCCAATTCCACCTCC...TGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp GGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGGGAAGTGTCTCAGCTaGAGGTTAATGTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: GSLNKHVLCPLAERAAGHGKCLS*RLMSPC
Trigger: ACATGGAGACATTAACCTTCAGCTGAGACACTTCCC...ATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp CTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTGGGGCCAGCTCAGCCTTaGAACAGCAGCTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LHGISEIPILITQIPTVVGPAQP*NSSLGS
Trigger: ACTTCCCAAGCTGCTGTTTCAAGGCTGAGCTGGCCC...CACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp GGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATAGGACATCAAGTAGCTaGCAACGATCTGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: GSLNKHVLCPLAERAAGHRTSSS*QRSVHL
Trigger: GAGATGGACAGATCGTTGTCAGCTACTTGATGTCCT...ATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp GCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCGGTGTAATTCAGAGATaGTCTCAATCCACGTGTCAA +
Preference number: 4 (lower is better)
Translates to: AGRFIKQTCSVPSGREGSGVIQR*SQSTCQ
Trigger: TTGACACGTGGATTGAGAGCATCTCTGAATTACACC...GCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp AGGCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCACATGTCAATGTACTCTaGCAGGCTGCAATCAATCTC +
Preference number: 4 (lower is better)
Translates to: RQAGSLNKHVLCPLAERAHVNVL*QAAINL
Trigger: GAGATTGATTGCAGCCTGGCAGAGTACATTGACATG...TGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp ACAATTCCATCCCTCTCACAAAAAGGACATCTTTTAAGCTTTCCTCCCAATCTAGAGGGCAGCAGGACATaGACTGCCCCTGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: TIPSLSQKGHLLSFPPNLEGSRT*TAPEPS
Trigger: GCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTC...TAGATTGGGAGGAAAGCTTAAAAGATGTCCTTTTTGTGAGAGGGATGGAATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000672656.2
CDS-3UTR GCA 90 bp TCTGAGGCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGAAAATTCGCGAGAGTTaGTTCCACTCTCGTGAGACC +
Preference number: 4 (lower is better)
Translates to: SEAGRFIKQTCSVPSGREKIRES*FHSRET
Trigger: GGTCTCACGAGAGTGGAAGCAACTCTCGCGAATTTT...CTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGCCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264020.6
CDS-3UTR CCA 90 bp AAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCAATATCCCCGACAGCTaGGATAAAATCAGGAATGAA +
Preference number: 4 (lower is better)
Translates to: KQTCSVPSGREGSRTCTANIPDS*DKIRNE
Trigger: TTCATTCCTGATTTTATCCCAGCTGTCGGGGATATT...GGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp GATGCATTAACTCCCCGGGGACAGCAATCTGAGGCAGGCAGGTTCATTAAACAATCCATGTCTCCAGCTTaGGAGGTGGAATTGGATGAA +
Preference number: 4 (lower is better)
Translates to: DALTPRGQQSEAGRFIKQSMSPA*EVELDE
Trigger: TTCATCCAATTCCACCTCCCAAGCTGGAGACATGGA...TTGTTTAATGAACCTGCCTGCCTCAGATTGCTGTCCCCGGGGAGTTAATGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp GATGCATTAACTCCCCGGGGACAGCAATCTGAGGCAGGCAGGTTCATTAAACAAGGAGGTGGAATTGGATaGAGGAGTGAATGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: DALTPRGQQSEAGRFIKQGGGIG*RSECFL
Trigger: AAGAAAGCATTCACTCCTTCATCCAATTCCACCTCC...TTGTTTAATGAACCTGCCTGCCTCAGATTGCTGTCCCCGGGGAGTTAATGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp GCCAAGCTGTGGCATGGGCAAGGACATCAAGTAGCTGACAACGATCTGTCCATCTGGAGTATAAATACTTaGAACCTCTTCGGAGTCGTT +
Preference number: 4 (lower is better)
Translates to: AKLWHGQGHQVADNDLSIWSINT*NLFGVV
Trigger: AACGACTCCGAAGAGGTTGCAAGTATTTATACTCCA...GATGGACAGATCGTTGTCAGCTACTTGATGTCCTTGCCCATGCCACAGCTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp CCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTTCCGGGGACCATTCCTaGATCAGCGTGTCAATGTCG +
Preference number: 4 (lower is better)
Translates to: PPWDLRNSNSYNSNPHSGSGDHS*ISVSMS
Trigger: CGACATTGACACGCTGATGCAGGAATGGTCCCCGGA...ACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp CTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTTCTCGTGAGACCTCCTaGGCGTTAAGCCTCACCCGC +
Preference number: 4 (lower is better)
Translates to: LSSQSNLHGISEIPILITSRETS*ALSLTR
Trigger: GCGGGTGAGGCTTAACGCGCAGGAGGTCTCACGAGA...AGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264020.6
CDS-3UTR GCA 90 bp CCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTGTACTGGAGCCTGTGGCATaGCCTCCCTTAGGACCTTGT +
Preference number: 4 (lower is better)
Translates to: PWDLRNSNSYNSNPHSGVLEPVA*PPLGPC
Trigger: ACAAGGTCCTAAGGGAGGGCATGCCACAGGCTCCAG...TACACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264020.6
ENST00000530872.5
CDS-3UTR CCA 90 bp GCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAAGTCCTTGGTGTCTTaGGGTTGGAGTATAAATACT +
Preference number: 4 (lower is better)
Translates to: AGRFIKQTCSVPSGREGSKSLVS*GWSINT
Trigger: AGTATTTATACTCCAACCCCAAGACACCAAGGACTT...GCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp TTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCAATTGGATGAAGGAGTaGATGCTTTCTTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: FIKQTCSVPSGREGSRTCNWMKE*MLSCLQ
Trigger: CTGAAGGCAAGAAAGCATTCACTCCTTCATCCAATT...GCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp GATGCATTAACTCCCCGGGGACAGCAATCTGAGGCAGGCAGGTTCATTAAACAAAATTGGATGAAGGAGTaGATGCTTTCTTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: DALTPRGQQSEAGRFIKQNWMKE*MLSCLQ
Trigger: CTGAAGGCAAGAAAGCATTCACTCCTTCATCCAATT...TTGTTTAATGAACCTGCCTGCCTCAGATTGCTGTCCCCGGGGAGTTAATGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp TTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTAGGGCCAGCTCAGCCTTaGAACAGCAGCTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LSFPPNLTSMGSQKFQFLGPAQP*NSSLGS
Trigger: ACTTCCCAAGCTGCTGTTTCAAGGCTGAGCTGGCCC...TAAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp ATTCCATCCCTCTCACAAAAAGGACATCTTTTAAGCTTTCCTCCCAATCTAACCACCCTCTCAAGTACATaGGAAGGGGTCTGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: IPSLSQKGHLLSFPPNLTTLSST*EGVWWH
Trigger: GTGCCACCAGACCCCTTCTCATGTACTTGAGAGGGT...GGTTAGATTGGGAGGAAAGCTTAAAAGATGTCCTTTTTGTGAGAGGGATGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264020.6
ENST00000530872.5
CDS-3UTR GCA 90 bp TTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCGGTGTAATTCAGAGATaGTCTCAATCCACGTGTCAA +
Preference number: 4 (lower is better)
Translates to: FIKQTCSVPSGREGSRTCGVIQR*SQSTCQ
Trigger: TTGACACGTGGATTGAGAGCATCTCTGAATTACACC...GCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp GGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGGTGTAATTCAGAGATaGTCTCAATCCACGTGTCAA +
Preference number: 4 (lower is better)
Translates to: GSLNKHVLCPLAERAAGHGVIQR*SQSTCQ
Trigger: TTGACACGTGGATTGAGAGCATCTCTGAATTACACC...ATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp CTTTTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTCCGGGGACCATTCCTaGATCAGCGTGTCAATGTCG +
Preference number: 4 (lower is better)
Translates to: LLSFPPNLTSMGSQKFQFSGDHS*ISVSMS
Trigger: CGACATTGACACGCTGATGCAGGAATGGTCCCCGGA...GAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp TTTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTCTGGAGCCTGTGGCATaGCCTCCCTTAGGACCTTGT +
Preference number: 4 (lower is better)
Translates to: FKLSSQSNLHGISEIPILLEPVA*PPLGPC
Trigger: ACAAGGTCCTAAGGGAGGGCATGCCACAGGCTCCAG...AAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264020.6
ENST00000530872.5
CDS-3UTR CCA 90 bp GCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGAAATATCCCCGACAGCTaGGATAAAATCAGGAATGAA +
Preference number: 4 (lower is better)
Translates to: AGSLNKHVLCPLAERAAGNIPDS*DKIRNE
Trigger: TTCATTCCTGATTTTATCCCAGCTGTCGGGGATATT...TCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp GATGCATTAACTCCCCGGGGACAGCAATCTGAGGCAGGCAGGTTCATTAAACAACAATCCACGTGTCAATaGCTTTGGGATTCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: DALTPRGQQSEAGRFIKQQSTCQ*LWDSFL
Trigger: CAGAAAAGAATCCCAAAGCCATTGACACGTGGATTG...TTGTTTAATGAACCTGCCTGCCTCAGATTGCTGTCCCCGGGGAGTTAATGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp CCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTGTATGTCAATGTCGGGCATaGGCCTGGTGTAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: PWDLRNSNSYNSNPHSGVCQCRA*AWCSAQ
Trigger: CTGTGCACTACACCAGGCCCATGCCCGACATTGACA...TACACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp GGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATCAGGGATGTCTAGAATaGCACAGATCATGTCAATGT +
Preference number: 4 (lower is better)
Translates to: GSLNKHVLCPLAERAAGHQGCLE*HRSCQC
Trigger: ACATTGACATGATCTGTGCCATTCTAGACATCCCTG...ATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000672656.2
CDS-3UTR CCA 90 bp CCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTACTTGCAGGGGCAGGTaGAACAGGGTCCATGTCTTT +
Preference number: 4 (lower is better)
Translates to: PPWDLRNSNSYNSNPHSGTCRGR*NRVHVF
Trigger: AAAGACATGGACCCTGTTCCACCTGCCCCTGCAAGT...ACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264020.6
ENST00000530872.5
CDS-3UTR TCA 90 bp ACAATTCCATCCCTCTCACAAAAAGGACATCTTTTAAGCTTTCCTCCCAATCTAACCCTCTCAAGTACATaGGAAGGGGTCTGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: TIPSLSQKGHLLSFPPNLTLSST*EGVWWH
Trigger: GTGCCACCAGACCCCTTCTCATGTACTTGAGAGGGT...TAGATTGGGAGGAAAGCTTAAAAGATGTCCTTTTTGTGAGAGGGATGGAATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264020.6
CDS-3UTR GCA 90 bp GGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATTGGAGTATAAATACTTaGAACCTCTTCGGAGTCGTT +
Preference number: 4 (lower is better)
Translates to: GSLNKHVLCPLAERAAGHWSINT*NLFGVV
Trigger: AACGACTCCGAAGAGGTTGCAAGTATTTATACTCCA...ATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp CCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTGTAGCTGCAATCAATCTCTaGCGTGGGCAGGCTTACCTT +
Preference number: 4 (lower is better)
Translates to: PWDLRNSNSYNSNPHSGVAAINL*RGQAYL
Trigger: AAGGTAAGCCTGCCCACGGCAGAGATTGATTGCAGC...TACACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp CCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTAACAAACATGTTCTGTaGCCTCTGGCAGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PPWDLRNSNSYNSNPHSGNKHVL*PLAERA
Trigger: TGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTT...ACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp GATGCATTAACTCCCCGGGGACAGCAATCTGAGGCAGGCAGGTTCATTAAACAAAATATCCCCGACAGCTaGGATAAAATCAGGAATGAA +
Preference number: 4 (lower is better)
Translates to: DALTPRGQQSEAGRFIKQNIPDS*DKIRNE
Trigger: TTCATTCCTGATTTTATCCCAGCTGTCGGGGATATT...TTGTTTAATGAACCTGCCTGCCTCAGATTGCTGTCCCCGGGGAGTTAATGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp ACAATTCCATCCCTCTCACAAAAAGGACATCTTTTAAGCTTTCCTCCCAATCTATGTCAATGTCGGGCATaGGCCTGGTGTAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: TIPSLSQKGHLLSFPPNLCQCRA*AWCSAQ
Trigger: CTGTGCACTACACCAGGCCCATGCCCGACATTGACA...TAGATTGGGAGGAAAGCTTAAAAGATGTCCTTTTTGTGAGAGGGATGGAATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000672656.2
CDS-3UTR CCA 90 bp CTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTTGTCAATGTCGGGCATaGGCCTGGTGTAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: LSSQSNLHGISEIPILITCQCRA*AWCSAQ
Trigger: CTGTGCACTACACCAGGCCCATGCCCGACATTGACA...AGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp CTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTTCACTAAAGCCCCGTTaGGGTGTCAACTGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LSSQSNLHGISEIPILITSLKPR*GVNCEV
Trigger: GACCTCACAGTTGACACCTCAACGGGGCTTTAGTGA...AGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp CTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTGGGGAAGTGTCTCAGCTaGAGGTTAATGTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: LHGISEIPILITQIPTVVGKCLS*RLMSPC
Trigger: ACATGGAGACATTAACCTTCAGCTGAGACACTTCCC...CACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp GGACATCTTTTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCGGGAAGTGTCTCAGCTaGAGGTTAATGTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: GHLLSFPPNLTSMGSQKFGKCLS*RLMSPC
Trigger: ACATGGAGACATTAACCTTCAGCTGAGACACTTCCC...GAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAAAAGATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp CCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTAGGACATCAAGTAGCTaGCAACGATCTGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: PPWDLRNSNSYNSNPHSGRTSSS*QRSVHL
Trigger: GAGATGGACAGATCGTTGTCAGCTACTTGATGTCCT...ACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp CTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTGAGGACATCAAGTAGCTaGCAACGATCTGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: LHGISEIPILITQIPTVVRTSSS*QRSVHL
Trigger: GAGATGGACAGATCGTTGTCAGCTACTTGATGTCCT...CACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp AACCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGCAAATGCTCATAGTCTaGAGGGTCATAGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: NLHGISEIPILITQIPTVQMLIV*RVIGPF
Trigger: GAAGGGGCCTATGACCCTGCAGACTATGAGCATTTG...CACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp GGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATTGTGTGATGTTGTGCTaGTTAGAATTCTCTGTTAAC +
Preference number: 4 (lower is better)
Translates to: GSLNKHVLCPLAERAAGHCVMLC*LEFSVN
Trigger: GTTAACAGAGAATTCTAAGCAGCACAACATCACACA...ATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp GATGCATTAACTCCCCGGGGACAGCAATCTGAGGCAGGCAGGTTCATTAAACAATGTTGTGTGATGTTGTaGTGCTTAGAATTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: DALTPRGQQSEAGRFIKQCCVML*CLEFSV
Trigger: AACAGAGAATTCTAAGCAGCACAACATCACACAACA...TTGTTTAATGAACCTGCCTGCCTCAGATTGCTGTCCCCGGGGAGTTAATGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp AACCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGAACAAACATGTTCTGTaGCCTCTGGCAGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: NLHGISEIPILITQIPTVNKHVL*PLAERA
Trigger: TGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTT...CACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp TTTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTCCACAGTGGTGTAGATaGATTAACTCCCCGGGGACA +
Preference number: 4 (lower is better)
Translates to: FKLSSQSNLHGISEIPILPQWCR*INSPGT
Trigger: TGTCCCCGGGGAGTTAATGCATCTACACCACTGTGG...AAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp GCTTGGGAAGTGTCTCAGCTGAAGGTTAATGTCTCCATGTCTCCAGCTTGGGAGTACCTACTGATGTACTaGAAGAGTTCCTTAATTTCA +
Preference number: 4 (lower is better)
Translates to: AWEVSQLKVNVSMSPAWEYLLMY*KSSLIS
Trigger: TGAAATTAAGGAACTCTTCCAGTACATCAGTAGGTA...CTCCCAAGCTGGAGACATGGAGACATTAACCTTCAGCTGAGACACTTCCCAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530872.5
CDS-3UTR CCA 90 bp TTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTAAATCAATCTCTGCCGTaGGCAGGCTTACCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LSFPPNLTSMGSQKFQFLNQSLP*AGLPCP
Trigger: TGGGCAAGGTAAGCCTGCCCACGGCAGAGATTGATT...TAAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp ACAATTCCATCCCTCTCACAAAAAGGACATCTTTTAAGCTTTCCTCCCAATCTAAATCAATCTCTGCCGTaGGCAGGCTTACCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: TIPSLSQKGHLLSFPPNLNQSLP*AGLPCP
Trigger: TGGGCAAGGTAAGCCTGCCCACGGCAGAGATTGATT...TAGATTGGGAGGAAAGCTTAAAAGATGTCCTTTTTGTGAGAGGGATGGAATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000672656.2
CDS-3UTR CCA 90 bp CCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTTCCATGTCTCCAGCTTaGGAGGTGGAATTGGATGAA +
Preference number: 4 (lower is better)
Translates to: PPWDLRNSNSYNSNPHSGSMSPA*EVELDE
Trigger: TTCATCCAATTCCACCTCCCAAGCTGGAGACATGGA...ACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp TTTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTAGCCAAGCTGTGGCATaGGCAAGGACATCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: FKLSSQSNLHGISEIPILSQAVA*ARTSSS
Trigger: GCTACTTGATGTCCTTGCCCATGCCACAGCTTGGCT...AAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp ATTCCATCCCTCTCACAAAAAGGACATCTTTTAAGCTTTCCTCCCAATCTAACCTCCTTTCTGTGCTTCTaGCTCTCTCTGTACCATCCC +
Preference number: 4 (lower is better)
Translates to: IPSLSQKGHLLSFPPNLTSFLCF*LSLYHP
Trigger: GGGATGGTACAGAGAGAGCCAGAAGCACAGAAAGGA...GGTTAGATTGGGAGGAAAGCTTAAAAGATGTCCTTTTTGTGAGAGGGATGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264020.6
ENST00000530872.5
CDS-3UTR TCA 90 bp CCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTGTATCCAGGTCAATCAACTaGGGTGTGTACCTACTGATG +
Preference number: 4 (lower is better)
Translates to: PWDLRNSNSYNSNPHSGVSRSIN*GVYLLM
Trigger: CATCAGTAGGTACACACCTCAGTTGATTGACCTGGA...TACACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp TTTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTGAGGTGTGTACCTACTaGTGTACTGGAAGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: FKLSSQSNLHGISEIPILEVCTY*CTGRVP
Trigger: AGGAACTCTTCCAGTACATCAGTAGGTACACACCTC...AAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp ATTCCATCCCTCTCACAAAAAGGACATCTTTTAAGCTTTCCTCCCAATCTAACCGGAGGTGGAATTGGATaGAGGAGTGAATGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: IPSLSQKGHLLSFPPNLTGGGIG*RSECFL
Trigger: AAGAAAGCATTCACTCCTTCATCCAATTCCACCTCC...GGTTAGATTGGGAGGAAAGCTTAAAAGATGTCCTTTTTGTGAGAGGGATGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp CCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTGGTGTAATTCAGAGATaGTCTCAATCCACGTGTCAA +
Preference number: 4 (lower is better)
Translates to: PPWDLRNSNSYNSNPHSGGVIQR*SQSTCQ
Trigger: TTGACACGTGGATTGAGAGCATCTCTGAATTACACC...ACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp ATTCCATCCCTCTCACAAAAAGGACATCTTTTAAGCTTTCCTCCCAATCTAACCCATGTCAATGTACTCTaGCAGGCTGCAATCAATCTC +
Preference number: 4 (lower is better)
Translates to: IPSLSQKGHLLSFPPNLTHVNVL*QAAINL
Trigger: GAGATTGATTGCAGCCTGGCAGAGTACATTGACATG...GGTTAGATTGGGAGGAAAGCTTAAAAGATGTCCTTTTTGTGAGAGGGATGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp CTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTGCGCTCATCATATGTCTaGTTTTCAACAACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LHGISEIPILITQIPTVVRSSYV*FSTTLV
Trigger: GACCAAGGTTGTTGAAAACCAGACATATGATGAGCG...CACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR TCA 90 bp TTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTAGGAGGTGGAATTGGATaGAGGAGTGAATGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LSFPPNLTSMGSQKFQFLGGGIG*RSECFL
Trigger: AAGAAAGCATTCACTCCTTCATCCAATTCCACCTCC...TAAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp CTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTGAAGTCCTTGGTGTCTTaGGGTTGGAGTATAAATACT +
Preference number: 4 (lower is better)
Translates to: LHGISEIPILITQIPTVVKSLVS*GWSINT
Trigger: AGTATTTATACTCCAACCCCAAGACACCAAGGACTT...CACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp TTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTACTCAAATCCCCACAGTaGTGTAGATGCATTAACTCC +
Preference number: 4 (lower is better)
Translates to: LSFPPNLTSMGSQKFQFLLKSPQ*CRCINS
Trigger: GGAGTTAATGCATCTACACCACTGTGGGGATTTGAG...TAAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp ACAATTCCATCCCTCTCACAAAAAGGACATCTTTTAAGCTTTCCTCCCAATCTACGCTCATCATATGTCTaGTTTTCAACAACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: TIPSLSQKGHLLSFPPNLRSSYV*FSTTLV
Trigger: GACCAAGGTTGTTGAAAACCAGACATATGATGAGCG...TAGATTGGGAGGAAAGCTTAAAAGATGTCCTTTTTGTGAGAGGGATGGAATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000672656.2
CDS-3UTR CCA 90 bp CCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTGTAAAGTCCTTGGTGTCTTaGGGTTGGAGTATAAATACT +
Preference number: 4 (lower is better)
Translates to: PWDLRNSNSYNSNPHSGVKSLVS*GWSINT
Trigger: AGTATTTATACTCCAACCCCAAGACACCAAGGACTT...TACACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp TTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTACAATCCACGTGTCAATaGCTTTGGGATTCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LSFPPNLTSMGSQKFQFLQSTCQ*LWDSFL
Trigger: CAGAAAAGAATCCCAAAGCCATTGACACGTGGATTG...TAAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp TTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTACAGGGATGTCTAGAATaGCACAGATCATGTCAATGT +
Preference number: 4 (lower is better)
Translates to: LSFPPNLTSMGSQKFQFLQGCLE*HRSCQC
Trigger: ACATTGACATGATCTGTGCCATTCTAGACATCCCTG...TAAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000672656.2
CDS-3UTR TCA 90 bp TTTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTAATGCTGTGAGTTCTTaGATTCTGAGTAGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: FKLSSQSNLHGISEIPILNAVSS*ILSRGK
Trigger: TTTCCCTCTACTCAGAATTCAAGAACTCACAGCATT...AAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000672656.2
CDS-3UTR GCA 90 bp TTTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTTGGAGTATAAATACTTaGAACCTCTTCGGAGTCGTT +
Preference number: 4 (lower is better)
Translates to: FKLSSQSNLHGISEIPILWSINT*NLFGVV
Trigger: AACGACTCCGAAGAGGTTGCAAGTATTTATACTCCA...AAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR GCA 90 bp CTTTTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTGTTGTGTGATGTTGTaGTGCTTAGAATTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LLSFPPNLTSMGSQKFQFCCVML*CLEFSV
Trigger: AACAGAGAATTCTAAGCAGCACAACATCACACAACA...GAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp ACAATTCCATCCCTCTCACAAAAAGGACATCTTTTAAGCTTTCCTCCCAATCTATTGGTGTCTTGGGGTTaGAGTATAAATACTTGCAAC +
Preference number: 4 (lower is better)
Translates to: TIPSLSQKGHLLSFPPNLLVSWG*SINTCN
Trigger: GTTGCAAGTATTTATACTCCAACCCCAAGACACCAA...TAGATTGGGAGGAAAGCTTAAAAGATGTCCTTTTTGTGAGAGGGATGGAATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000672656.2
CDS-3UTR CCA 90 bp AACCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGTACCTACTGATGTACTaGAAGAGTTCCTTAATTTCA +
Preference number: 4 (lower is better)
Translates to: NLHGISEIPILITQIPTVYLLMY*KSSLIS
Trigger: TGAAATTAAGGAACTCTTCCAGTACATCAGTAGGTA...CACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CCA 90 bp TTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTATACCTACTGATGTACTaGAAGAGTTCCTTAATTTCA +
Preference number: 4 (lower is better)
Translates to: LSFPPNLTSMGSQKFQFLYLLMY*KSSLIS
Trigger: TGAAATTAAGGAACTCTTCCAGTACATCAGTAGGTA...TAAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS TCA 90 bp AACTTCGTGGTGGTGGTGCGGGTCCCAGGCTGCGGACCTCGGAACTaGTGCTGTCCCGCCGGTTCCCTGGCGCTTAGGCTCAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: NFVVVVRVPGCGPRN*CCPAGSLALRLSRL
Trigger: CAGCCTGCTGAGCCTAAGCGCCAGGGAACCGGCGGGACAGCATCAGTTCCGAGGTCCGCAGCCTGGGACCCGCACCACCACCACGAAGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528378.5
CDS TCA 90 bp GCAGTGTGGCCTCCTGTGCCCGGTCTCCTGGAGATCCGATGGAGCTaGCTCCAGTCCATCTGTCGTCGTGCCCGCTTCCGCACCACCCCC +
Preference number: 5 (lower is better)
Translates to: AVWPPVPGLLEIRWS*LQSICRRARFRTTP
Trigger: GGGGGTGGTGCGGAAGCGGGCACGACGACAGATGGACTGGAGTCAGCTCCATCGGATCTCCAGGAGACCGGGCACAGGAGGCCACACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528378.5
CDS GCA 90 bp GAGACGGCCCGGCGTTTTTGCTCTGCGAGAACTTCGTGGTGGTGGTaGGGGTCCCAGGCTGCGGACCTCGGAACTGATGCTGTCCCGCCG +
Preference number: 5 (lower is better)
Translates to: ETARRFCSARTSWWW*GSQAADLGTDAVPP
Trigger: CGGCGGGACAGCATCAGTTCCGAGGTCCGCAGCCTGGGACCCGCACCACCACCACGAAGTTCTCGCAGAGCAAAAACGCCGGGCCGTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528378.5
CDS GCA 90 bp CTCCCTCGTTTGCTGGGACCTGCCCCTGAGACGGCCCGGCGTTTTTaGTCTGCGAGAACTTCGTGGTGGTGGTGCGGGTCCCAGGCTGCG +
Preference number: 5 (lower is better)
Translates to: LPRLLGPAPETARRF*SARTSWWWCGSQAA
Trigger: CGCAGCCTGGGACCCGCACCACCACCACGAAGTTCTCGCAGAGCAAAAACGCCGGGCCGTCTCAGGGGCAGGTCCCAGCAAACGAGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528378.5
CDS CCA 90 bp CCTGAGACGGCCCGGCGTTTTTGCTCTGCGAGAACTTCGTGGTGGTaGTGCGGGTCCCAGGCTGCGGACCTCGGAACTGATGCTGTCCCG +
Preference number: 5 (lower is better)
Translates to: PETARRFCSARTSWW*CGSQAADLGTDAVP
Trigger: CGGGACAGCATCAGTTCCGAGGTCCGCAGCCTGGGACCCGCACCACCACCACGAAGTTCTCGCAGAGCAAAAACGCCGGGCCGTCTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528378.5
CDS CCA 90 bp GCCCCTGAGACGGCCCGGCGTTTTTGCTCTGCGAGAACTTCGTGGTaGTGGTGCGGGTCCCAGGCTGCGGACCTCGGAACTGATGCTGTC +
Preference number: 5 (lower is better)
Translates to: APETARRFCSARTSW*WCGSQAADLGTDAV
Trigger: GACAGCATCAGTTCCGAGGTCCGCAGCCTGGGACCCGCACCACCACCACGAAGTTCTCGCAGAGCAAAAACGCCGGGCCGTCTCAGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528378.5
CDS CCA 90 bp CCTGCCCCTGAGACGGCCCGGCGTTTTTGCTCTGCGAGAACTTCGTaGTGGTGGTGCGGGTCCCAGGCTGCGGACCTCGGAACTGATGCT +
Preference number: 5 (lower is better)
Translates to: PAPETARRFCSARTS*WWCGSQAADLGTDA
Trigger: AGCATCAGTTCCGAGGTCCGCAGCCTGGGACCCGCACCACCACCACGAAGTTCTCGCAGAGCAAAAACGCCGGGCCGTCTCAGGGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528378.5
CDS GCA 90 bp GGGAGGCTGACGCAGGAGGTCTGCTTAAACCCAGGAGTTCGAGGCTaGAGTGAGCAGTGTCCAGTGTTCATGCTGCTGCACTCCAGCCCG +
Preference number: 5 (lower is better)
Translates to: GRLTQEVCLNPGVRG*SEQCPVFMLLHSSP
Trigger: CGGGCTGGAGTGCAGCAGCATGAACACTGGACACTGCTCACTGCAGCCTCGAACTCCTGGGTTTAAGCAGACCTCCTGCGTCAGCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527868.1
ENST00000531939.5
CDS TCA 90 bp GCTGACGCAGGAGGTCTGCTTAAACCCAGGAGTTCGAGGCTGCAGTaGGCAGTGTCCAGTGTTCATGCTGCTGCACTCCAGCCCGGGCAA +
Preference number: 5 (lower is better)
Translates to: ADAGGLLKPRSSRLQ*AVSSVHAAALQPGQ
Trigger: TTGCCCGGGCTGGAGTGCAGCAGCATGAACACTGGACACTGCTCACTGCAGCCTCGAACTCCTGGGTTTAAGCAGACCTCCTGCGTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527868.1
ENST00000531939.5
CDS-3UTR CAA 90 bp CATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCAGAACGAGGAAGTCCTaGGTGTCTTGGGGTTGGAGT +
Preference number: 5 (lower is better)
Translates to: HVLCPLAERAAGHALPLSRTRKS*VSWGWS
Trigger: ACTCCAACCCCAAGACACCAAGGACTTCCTCGTTCT...GCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp AGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGCAAGGTGGGCAGGCTTACCTaGCCCAAAAGCTCTTCAAAC +
Preference number: 5 (lower is better)
Translates to: REGSRTCTAPEPSCGMGKVGRLT*PKSSSN
Trigger: GTTTGAAGAGCTTTTGGGCAAGGTAAGCCTGCCCAC...CTTGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp TCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCGCTTGGGAGGTGGAATaGGATGAAGGAGTGAATGCT +
Preference number: 5 (lower is better)
Translates to: SVPSGREGSRTCTAPEPSAWEVE*DEGVNA
Trigger: AGCATTCACTCCTTCATCCAATTCCACCTCCCAAGC...GCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS GCA 90 bp CACCCTCTCAAGTACATGAGAAGGGGTCTGGTGGCACTTGAGACTTaGAGGGGCAGGTGGAACAGGGTCCATGTCTTTGCCTCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: HPLKYMRRGLVALET*RGRWNRVHVFASVA
Trigger: GGCCACAGAGGCAAAGACATGGACCCTGTTCCACCTGCCCCTGCAAGTCTCAAGTGCCACCAGACCCCTTCTCATGTACTTGAGAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264020.6
ENST00000530872.5
ENST00000534114.5
CDS-3UTR CAA 90 bp GTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTTGGGAGGTGGAATaGGATGAAGGAGTGAATGCT +
Preference number: 5 (lower is better)
Translates to: VLCPLAERAAGHALPLSQAWEVE*DEGVNA
Trigger: AGCATTCACTCCTTCATCCAATTCCACCTCCCAAGC...TTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS TCA 90 bp ACCATCCCACCCTCTCAAGTACATGAGAAGGGGTCTGGTGGCACTTaGGACTTGCAGGGGCAGGTGGAACAGGGTCCATGTCTTTGCCTC +
Preference number: 5 (lower is better)
Translates to: TIPPSQVHEKGSGGT*DLQGQVEQGPCLCL
Trigger: GAGGCAAAGACATGGACCCTGTTCCACCTGCCCCTGCAAGTCTCAAGTGCCACCAGACCCCTTCTCATGTACTTGAGAGGGTGGGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264020.6
ENST00000530872.5
ENST00000534114.5
CDS CCA 90 bp AGACTTGCAGGGGCAGGTGGAACAGGGTCCATGTCTTTGCCTCTGTaGCCTGGAGCCTGTGGCATGCCCTCCCTTAGGACCTTGTTATTT +
Preference number: 5 (lower is better)
Translates to: RLAGAGGTGSMSLPL*PGACGMPSLRTLLF
Trigger: AAATAACAAGGTCCTAAGGGAGGGCATGCCACAGGCTCCAGGCCACAGAGGCAAAGACATGGACCCTGTTCCACCTGCCCCTGCAAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264020.6
ENST00000530872.5
ENST00000534114.5
CDS-3UTR CAA 90 bp TCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTTATCAGCCATAGCCTaGTTAGGAAGATGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: SVPSGREGSRTCTAPEPSLSAIA*LGRWAE
Trigger: TTCTGCCCATCTTCCTAACAAGGCTATGGCTGATAA...GCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp GCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGCATTATCAGCCATAGCCTaGTTAGGAAGATGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: AERAAGHALPLSQAVAWALSAIA*LGRWAE
Trigger: TTCTGCCCATCTTCCTAACAAGGCTATGGCTGATAA...TGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp GTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAATTATCAGCCATAGCCTaGTTAGGAAGATGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: VLCPLAERAAGHALPLSQLSAIA*LGRWAE
Trigger: TTCTGCCCATCTTCCTAACAAGGCTATGGCTGATAA...TTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp AGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGCAAGCACGTGTCAATGGCTTaGGGATTCTTTTCTGCATCT +
Preference number: 5 (lower is better)
Translates to: REGSRTCTAPEPSCGMGKHVSMA*GFFSAS
Trigger: AGATGCAGAAAAGAATCCCAAAGCCATTGACACGTG...CTTGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp CTGACAACGATCTGTCCATCTCAGCTGGGGCAGAGGGGCCAGCTCAGCCTTGAAGCTTGGGAGGTGGAATaGGATGAAGGAGTGAATGCT +
Preference number: 5 (lower is better)
Translates to: LTTICPSQLGQRGQLSLEAWEVE*DEGVNA
Trigger: AGCATTCACTCCTTCATCCAATTCCACCTCCCAAGC...TTCAAGGCTGAGCTGGCCCCTCTGCCCCAGCTGAGATGGACAGATCGTTGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp GCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGAACAGGGTCCATGTCTTaGCCTCTGTGGCCTGGAGCC +
Preference number: 5 (lower is better)
Translates to: AGSLNKHVLCPLAERAAGTGSMS*PLWPGA
Trigger: GGCTCCAGGCCACAGAGGCAAAGACATGGACCCTGT...TCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264020.6
ENST00000530872.5
CDS-3UTR CAA 90 bp GTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAACTTGGTGTCTTGGGGTaGGAGTATAAATACTTGCAA +
Preference number: 5 (lower is better)
Translates to: VLCPLAERAAGHALPLSQLGVLG*EYKYLQ
Trigger: TTGCAAGTATTTATACTCCAACCCCAAGACACCAAG...TTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS GCA 90 bp AATTTTAAAATTCGCGAGAGTTGCTTCCACTCTCGTGAGACCTCCTaGGCGTTAAGCCTCACCCGCGAAGGCTCTCCACGCAGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: NFKIRESCFHSRETS*ALSLTREGSPRRKK
Trigger: CTTCTTCCTGCGTGGAGAGCCTTCGCGGGTGAGGCTTAACGCGCAGGAGGTCTCACGAGAGTGGAAGCAACTCTCGCGAATTTTAAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264020.6
CDS CCA 90 bp ACCTATGCCCAGTTCTCTATTGCTCTAACCAATACACCAACCACCTaGCACCTCGTCACCAGAAAGAGAAGGGGGCACTTCCCAGAAGGG +
Preference number: 5 (lower is better)
Translates to: TYAQFSIALTNTPTT*HLVTRKRRGHFPEG
Trigger: CCCTTCTGGGAAGTGCCCCCTTCTCTTTCTGGTGACGAGGTGCCAGGTGGTTGGTGTATTGGTTAGAGCAATAGAGAACTGGGCATAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531201.5
CDS-3UTR CAA 90 bp CTGACAACGATCTGTCCATCTCAGCTGGGGCAGAGGGGCCAGCTCAGCCTTGAAGAAGTCCTTGGTGTCTaGGGGTTGGAGTATAAATAC +
Preference number: 5 (lower is better)
Translates to: LTTICPSQLGQRGQLSLEEVLGV*GLEYKY
Trigger: GTATTTATACTCCAACCCCAAGACACCAAGGACTTC...TTCAAGGCTGAGCTGGCCCCTCTGCCCCAGCTGAGATGGACAGATCGTTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp CTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTATATGTTGTGTGATGTaGTGCTGCTTAGAATTCTCT +
Preference number: 5 (lower is better)
Translates to: LCPLAERAAGHALPLSQAICCVM*CCLEFS
Trigger: AGAGAATTCTAAGCAGCACAACATCACACAACATAT...AGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp GCCAAGCTGTGGCATGGGCAAGGACATCAAGTAGCTGACAACGATCTGTCCATCCAAGCAACCAGCCTGTaGTCAGTCGCTAGGCAAAAA +
Preference number: 5 (lower is better)
Translates to: AKLWHGQGHQVADNDLSIQATSL*SVARQK
Trigger: TTTTTGCCTAGCGACTGACAACAGGCTGGTTGCTTG...GATGGACAGATCGTTGTCAGCTACTTGATGTCCTTGCCCATGCCACAGCTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264020.6
ENST00000264021.8
CDS-3UTR CAA 90 bp CTGACAACGATCTGTCCATCTCAGCTGGGGCAGAGGGGCCAGCTCAGCCTTGAACTTGGTGTCTTGGGGTaGGAGTATAAATACTTGCAA +
Preference number: 5 (lower is better)
Translates to: LTTICPSQLGQRGQLSLELGVLG*EYKYLQ
Trigger: TTGCAAGTATTTATACTCCAACCCCAAGACACCAAG...TTCAAGGCTGAGCTGGCCCCTCTGCCCCAGCTGAGATGGACAGATCGTTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp AGGCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAAGAACGAGGAAGTCCTaGGTGTCTTGGGGTTGGAGT +
Preference number: 5 (lower is better)
Translates to: RQAGSLNKHVLCPLAERARTRKS*VSWGWS
Trigger: ACTCCAACCCCAAGACACCAAGGACTTCCTCGTTCT...TGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp AGAGAGGGCAGCAGGACATGCACTGCCCCTGAGCCAAGCTGTGGCATGGGCAAGATATGTTGTGTGATGTaGTGCTGCTTAGAATTCTCT +
Preference number: 5 (lower is better)
Translates to: REGSRTCTAPEPSCGMGKICCVM*CCLEFS
Trigger: AGAGAATTCTAAGCAGCACAACATCACACAACATAT...CTTGCCCATGCCACAGCTTGGCTCAGGGGCAGTGCATGTCCTGCTGCCCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS GCA 90 bp GGATGTCTAGAATGGCACAGATCATGTCAATGTACTCTGCCAGGCTaGAATCAATCTCTGCCGTGGGCAGGCTTACCTTGCCCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: GCLEWHRSCQCTLPG*NQSLPWAGLPCPKA
Trigger: AGCTTTTGGGCAAGGTAAGCCTGCCCACGGCAGAGATTGATTGCAGCCTGGCAGAGTACATTGACATGATCTGTGCCATTCTAGACATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000531201.5
ENST00000672656.2
CDS GCA 90 bp CCTTCAGCGAGAGCTTTAAAATGCACAGATCATGTCAATGTACTCTaGCAGGCTGCAATCAATCTCTGCCGTGGGCAGGCTTACCTTGCC +
Preference number: 5 (lower is better)
Translates to: PSARALKCTDHVNVL*QAAINLCRGQAYLA
Trigger: GGCAAGGTAAGCCTGCCCACGGCAGAGATTGATTGCAGCCTGGCAGAGTACATTGACATGATCTGTGCATTTTAAAGCTCTCGCTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530872.5
CDS-3UTR CAA 90 bp GTAGATGCATTAACTCCCCGGGGACAGCAATCTGAGGCAGGCAGGTTCATTAAAAGAACGAGGAAGTCCTaGGTGTCTTGGGGTTGGAGT +
Preference number: 5 (lower is better)
Translates to: VDALTPRGQQSEAGRFIKRTRKS*VSWGWS
Trigger: ACTCCAACCCCAAGACACCAAGGACTTCCTCGTTCT...TTTAATGAACCTGCCTGCCTCAGATTGCTGTCCCCGGGGAGTTAATGCATCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp GCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGAACCAATAGGCCAAGGTaGTCAGGCTTTCCATCAGGA +
Preference number: 5 (lower is better)
Translates to: AGSLNKHVLCPLAERAAGTNRPR*SGFPSG
Trigger: TCCTGATGGAAAGCCTGACAACCTTGGCCTATTGGT...TCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp GGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGTGGGCAGGCTTACCTaGCCCAAAAGCTCTTCAAAC +
Preference number: 5 (lower is better)
Translates to: GSLNKHVLCPLAERAAGHVGRLT*PKSSSN
Trigger: GTTTGAAGAGCTTTTGGGCAAGGTAAGCCTGCCCAC...ATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp GCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCTGGTTTTCAACAACCTaGGTCTGTAGCCCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: AGRFIKQTCSVPSGREGSWFSTT*VCSPSE
Trigger: TTCAGAAGGGCTACAGACCAAGGTTGTTGAAAACCA...GCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp GCCAAGCTGTGGCATGGGCAAGGACATCAAGTAGCTGACAACGATCTGTCCATCGAAGTCCTTGGTGTCTaGGGGTTGGAGTATAAATAC +
Preference number: 5 (lower is better)
Translates to: AKLWHGQGHQVADNDLSIEVLGV*GLEYKY
Trigger: GTATTTATACTCCAACCCCAAGACACCAAGGACTTC...GATGGACAGATCGTTGTCAGCTACTTGATGTCCTTGCCCATGCCACAGCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp GCCAAGCTGTGGCATGGGCAAGGACATCAAGTAGCTGACAACGATCTGTCCATCTTATCAGCCATAGCCTaGTTAGGAAGATGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: AKLWHGQGHQVADNDLSILSAIA*LGRWAE
Trigger: TTCTGCCCATCTTCCTAACAAGGCTATGGCTGATAA...GATGGACAGATCGTTGTCAGCTACTTGATGTCCTTGCCCATGCCACAGCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp GGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATACCAATAGGCCAAGGTaGTCAGGCTTTCCATCAGGA +
Preference number: 5 (lower is better)
Translates to: GSLNKHVLCPLAERAAGHTNRPR*SGFPSG
Trigger: TCCTGATGGAAAGCCTGACAACCTTGGCCTATTGGT...ATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp GCCAAGCTGTGGCATGGGCAAGGACATCAAGTAGCTGACAACGATCTGTCCATCCACGTGTCAATGGCTTaGGGATTCTTTTCTGCATCT +
Preference number: 5 (lower is better)
Translates to: AKLWHGQGHQVADNDLSIHVSMA*GFFSAS
Trigger: AGATGCAGAAAAGAATCCCAAAGCCATTGACACGTG...GATGGACAGATCGTTGTCAGCTACTTGATGTCCTTGCCCATGCCACAGCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp CCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTACAGGGTCCATGTCTTaGCCTCTGTGGCCTGGAGCC +
Preference number: 5 (lower is better)
Translates to: PPWDLRNSNSYNSNPHSGTGSMS*PLWPGA
Trigger: GGCTCCAGGCCACAGAGGCAAAGACATGGACCCTGT...ACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264020.6
ENST00000530872.5
CDS GCA 90 bp GAGAGCTTTAAAATGCACAGATCATGTCAATGTACTCTGCCAGGCTaGAATCAATCTCTGCCGTGGGCAGGCTTACCTTGCCCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: ESFKMHRSCQCTLPG*NQSLPWAGLPCPKA
Trigger: AGCTTTTGGGCAAGGTAAGCCTGCCCACGGCAGAGATTGATTGCAGCCTGGCAGAGTACATTGACATGATCTGTGCATTTTAAAGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530872.5
CDS-3UTR CAA 90 bp GCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGATGGTTTTCAACAACCTaGGTCTGTAGCCCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: AGSLNKHVLCPLAERAAGWFSTT*VCSPSE
Trigger: TTCAGAAGGGCTACAGACCAAGGTTGTTGAAAACCA...TCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp TTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCCCCTCCCTTAGGACCTaGTTATTTTCCTCTTCACAC +
Preference number: 5 (lower is better)
Translates to: FIKQTCSVPSGREGSRTCPSLRT*LFSSSH
Trigger: GTGTGAAGAGGAAAATAACAAGGTCCTAAGGGAGGG...GCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264020.6
ENST00000530872.5
CDS CCA 90 bp GTACCTACTGATGTACTGGAAGAGTTCCTTAATTTCAGCAGAAACTaGCAAATGCTCATAGTCTGCAGGGTCATAGGCCCCTTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: VPTDVLEEFLNFSRN*QMLIVCRVIGPFQR
Trigger: CCTCTGGAAGGGGCCTATGACCCTGCAGACTATGAGCATTTGCCAGTTTCTGCTGAAATTAAGGAACTCTTCCAGTACATCAGTAGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000528378.5
ENST00000530872.5
ENST00000531201.5
ENST00000531939.5
ENST00000534114.5
ENST00000534156.5
ENST00000672656.2
CDS-3UTR CAA 90 bp GCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGATTGGAGTATAAATACTaGCAACCTCTTCGGAGTCGT +
Preference number: 5 (lower is better)
Translates to: AGSLNKHVLCPLAERAAGLEYKY*QPLRSR
Trigger: ACGACTCCGAAGAGGTTGCAAGTATTTATACTCCAA...TCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp TCTGAGGCAGGCAGGTTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGAAGTCCTTGGTGTCTaGGGGTTGGAGTATAAATAC +
Preference number: 5 (lower is better)
Translates to: SEAGRFIKQTCSVPSGREEVLGV*GLEYKY
Trigger: GTATTTATACTCCAACCCCAAGACACCAAGGACTTC...CTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAACCTGCCTGCCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp GTAGATGCATTAACTCCCCGGGGACAGCAATCTGAGGCAGGCAGGTTCATTAAACACGTGTCAATGGCTTaGGGATTCTTTTCTGCATCT +
Preference number: 5 (lower is better)
Translates to: VDALTPRGQQSEAGRFIKHVSMA*GFFSAS
Trigger: AGATGCAGAAAAGAATCCCAAAGCCATTGACACGTG...TTTAATGAACCTGCCTGCCTCAGATTGCTGTCCCCGGGGAGTTAATGCATCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS CCA 90 bp GTACCTACTGATGTACTGGAAGAGTTCCTTAATTTCAGCAGAAACTaGCAAATGCTCATAGTCTGCAGGGTCATAGGCCCTGGGAAAAGG +
Preference number: 5 (lower is better)
Translates to: VPTDVLEEFLNFSRN*QMLIVCRVIGPGKR
Trigger: CCTTTTCCCAGGGCCTATGACCCTGCAGACTATGAGCATTTGCCAGTTTCTGCTGAAATTAAGGAACTCTTCCAGTACATCAGTAGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525060.1
CDS-3UTR CAA 90 bp CCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTAGAACGAGGAAGTCCTaGGTGTCTTGGGGTTGGAGT +
Preference number: 5 (lower is better)
Translates to: PPWDLRNSNSYNSNPHSGRTRKS*VSWGWS
Trigger: ACTCCAACCCCAAGACACCAAGGACTTCCTCGTTCT...ACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS GCA 90 bp GAAGAGTTCCTTAATTTCAGCAGAAACTGGCAAATGCTCATAGTCTaGAGGGTCATAGGCCCTGGGAAAAGGAAAACAGTTTGTTCGAGG +
Preference number: 5 (lower is better)
Translates to: EEFLNFSRNWQMLIV*RVIGPGKRKTVCSR
Trigger: CCTCGAACAAACTGTTTTCCTTTTCCCAGGGCCTATGACCCTGCAGACTATGAGCATTTGCCAGTTTCTGCTGAAATTAAGGAACTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525060.1
CDS-3UTR CAA 90 bp CCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTACCAATAGGCCAAGGTaGTCAGGCTTTCCATCAGGA +
Preference number: 5 (lower is better)
Translates to: PPWDLRNSNSYNSNPHSGTNRPR*SGFPSG
Trigger: TCCTGATGGAAAGCCTGACAACCTTGGCCTATTGGT...ACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp CTTTTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCGTGGGCAGGCTTACCTaGCCCAAAAGCTCTTCAAAC +
Preference number: 5 (lower is better)
Translates to: LLSFPPNLTSMGSQKFQFVGRLT*PKSSSN
Trigger: GTTTGAAGAGCTTTTGGGCAAGGTAAGCCTGCCCAC...GAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS GCA 90 bp TTAGAATTCTCTGTTAACCAGAGTGAGAGCACCGTAGGGTCTGACTaGTTTGTAGAAGGTTCATCCAATACCAATAGGCCAAGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: LEFSVNQSESTVGSD*FVEGSSNTNRPRLS
Trigger: TGACAACCTTGGCCTATTGGTATTGGATGAACCTTCTACAAAGCAGTCAGACCCTACGGTGCTCTCACTCTGGTTAACAGAGAATTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000525060.1
ENST00000530872.5
ENST00000531201.5
ENST00000531939.5
ENST00000534156.5
ENST00000672656.2
CDS-3UTR CAA 90 bp AACCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGCAAGCAACCAGCCTGTaGTCAGTCGCTAGGCAAAAA +
Preference number: 5 (lower is better)
Translates to: NLHGISEIPILITQIPTVQATSL*SVARQK
Trigger: TTTTTGCCTAGCGACTGACAACAGGCTGGTTGCTTG...CACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264020.6
ENST00000264021.8
CDS-3UTR CAA 90 bp AACCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGACCAATAGGCCAAGGTaGTCAGGCTTTCCATCAGGA +
Preference number: 5 (lower is better)
Translates to: NLHGISEIPILITQIPTVTNRPR*SGFPSG
Trigger: TCCTGATGGAAAGCCTGACAACCTTGGCCTATTGGT...CACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp TTCATTAAACAAACATGTTCTGTGCCCTCTGGCAGAGAGGGCAGCAGGACATGCATATGTTGTGTGATGTaGTGCTGCTTAGAATTCTCT +
Preference number: 5 (lower is better)
Translates to: FIKQTCSVPSGREGSRTCICCVM*CCLEFS
Trigger: AGAGAATTCTAAGCAGCACAACATCACACAACATAT...GCATGTCCTGCTGCCCTCTCTGCCAGAGGGCACAGAACATGTTTGTTTAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp ATTCCATCCCTCTCACAAAAAGGACATCTTTTAAGCTTTCCTCCCAATCTAACCGCTTGGGAGGTGGAATaGGATGAAGGAGTGAATGCT +
Preference number: 5 (lower is better)
Translates to: IPSLSQKGHLLSFPPNLTAWEVE*DEGVNA
Trigger: AGCATTCACTCCTTCATCCAATTCCACCTCCCAAGC...GGTTAGATTGGGAGGAAAGCTTAAAAGATGTCCTTTTTGTGAGAGGGATGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp CCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTCCCTCCCTTAGGACCTaGTTATTTTCCTCTTCACAC +
Preference number: 5 (lower is better)
Translates to: PPWDLRNSNSYNSNPHSGPSLRT*LFSSSH
Trigger: GTGTGAAGAGGAAAATAACAAGGTCCTAAGGGAGGG...ACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264020.6
ENST00000530872.5
CDS-3UTR CAA 90 bp CCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTTTGGAGTATAAATACTaGCAACCTCTTCGGAGTCGT +
Preference number: 5 (lower is better)
Translates to: PPWDLRNSNSYNSNPHSGLEYKY*QPLRSR
Trigger: ACGACTCCGAAGAGGTTGCAAGTATTTATACTCCAA...ACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp CCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGGTCTTGGTGTCTTGGGGTaGGAGTATAAATACTTGCAA +
Preference number: 5 (lower is better)
Translates to: PPWDLRNSNSYNSNPHSGLGVLG*EYKYLQ
Trigger: TTGCAAGTATTTATACTCCAACCCCAAGACACCAAG...ACCACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp CTTTTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCGAAGTCCTTGGTGTCTaGGGGTTGGAGTATAAATAC +
Preference number: 5 (lower is better)
Translates to: LLSFPPNLTSMGSQKFQFEVLGV*GLEYKY
Trigger: GTATTTATACTCCAACCCCAAGACACCAAGGACTTC...GAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp ATTCCATCCCTCTCACAAAAAGGACATCTTTTAAGCTTTCCTCCCAATCTAACCCACGTGTCAATGGCTTaGGGATTCTTTTCTGCATCT +
Preference number: 5 (lower is better)
Translates to: IPSLSQKGHLLSFPPNLTHVSMA*GFFSAS
Trigger: AGATGCAGAAAAGAATCCCAAAGCCATTGACACGTG...GGTTAGATTGGGAGGAAAGCTTAAAAGATGTCCTTTTTGTGAGAGGGATGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS GCA 90 bp AGCTGCTTGAAACTATCAAAAGAAGAAAGTTCAAAATCAACCTTGTaGCCATCAAACCAGCAGTCCCAGGGACTATGGACTTTCCATTTT +
Preference number: 5 (lower is better)
Translates to: SCLKLSKEESSKSTL*PSNQQSQGLWTFHF
Trigger: AAAATGGAAAGTCCATAGTCCCTGGGACTGCTGGTTTGATGGGCACAAGGTTGATTTTGAACTTTCTTCTTTTGATAGTTTCAAGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531201.5
CDS-3UTR CAA 90 bp TTTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTTGGTTTTCAACAACCTaGGTCTGTAGCCCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: FKLSSQSNLHGISEIPILWFSTT*VCSPSE
Trigger: TTCAGAAGGGCTACAGACCAAGGTTGTTGAAAACCA...AAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp AACCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGTTGGAGTATAAATACTaGCAACCTCTTCGGAGTCGT +
Preference number: 5 (lower is better)
Translates to: NLHGISEIPILITQIPTVLEYKY*QPLRSR
Trigger: ACGACTCCGAAGAGGTTGCAAGTATTTATACTCCAA...CACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp CTTTTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTGGAGTATAAATACTaGCAACCTCTTCGGAGTCGT +
Preference number: 5 (lower is better)
Translates to: LLSFPPNLTSMGSQKFQFLEYKY*QPLRSR
Trigger: ACGACTCCGAAGAGGTTGCAAGTATTTATACTCCAA...GAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp TTTAAGCTTTCCTCCCAATCTAACCTCCATGGGATCTCAGAAATTCCAATTCTTCTTGGTGTCTTGGGGTaGGAGTATAAATACTTGCAA +
Preference number: 5 (lower is better)
Translates to: FKLSSQSNLHGISEIPILLGVLG*EYKYLQ
Trigger: TTGCAAGTATTTATACTCCAACCCCAAGACACCAAG...AAGAATTGGAATTTCTGAGATCCCATGGAGGTTAGATTGGGAGGAAAGCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS-3UTR CAA 90 bp AACCTCCATGGGATCTCAGAAATTCCAATTCTTATAACTCAAATCCCCACAGTGATATGTTGTGTGATGTaGTGCTGCTTAGAATTCTCT +
Preference number: 5 (lower is better)
Translates to: NLHGISEIPILITQIPTVICCVM*CCLEFS
Trigger: AGAGAATTCTAAGCAGCACAACATCACACAACATAT...CACTGTGGGGATTTGAGTTATAAGAATTGGAATTTCTGAGATCCCATGGAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000672656.2
CDS TCA 90 bp ATAAAACAAGGTTTATTGGAACATCTGGCTAAAGAGACAGGAGACTaGATTCTAGTCATGGCTCTGCCAGTTCAATTCAAGATATATTTA +
Preference number: 5 (lower is better)
Translates to: IKQGLLEHLAKETGD*ILVMALPVQFKIYL
Trigger: TAAATATATCTTGAATTGAACTGGCAGAGCCATGACTAGAATTCAGTCTCCTGTCTCTTTAGCCAGATGTTCCAATAAACCTTGTTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531939.5
CDS TCA 72 bp GTGGTGGTGCGGGTCCCAGGCTGCGGACCTCGGAACTaGTGCTGTCCCGCCGGTTCCCTGGCGCTTAGGCTC +
Preference number: 6 (lower is better)
Translates to: VVVRVPGCGPRN*CCPAGSLALRL
Trigger: GAGCCTAAGCGCCAGGGAACCGGCGGGACAGCATCAGTTCCGAGGTCCGCAGCCTGGGACCCGCACCACCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528378.5
CDS CCA 72 bp GCGGACCTCGGAACTGATGCTGTCCCGCCGGTTCCCTaGCGCTTAGGCTCAGCAGGCTGGGCCTGTCTCCGG +
Preference number: 6 (lower is better)
Translates to: ADLGTDAVPPVP*RLGSAGWACLR
Trigger: CCGGAGACAGGCCCAGCCTGCTGAGCCTAAGCGCCAGGGAACCGGCGGGACAGCATCAGTTCCGAGGTCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528378.5
CDS CCA 72 bp GAGACGGCCCGGCGTTTTTGCTCTGCGAGAACTTCGTaGTGGTGGTGCGGGTCCCAGGCTGCGGACCTCGGA +
Preference number: 6 (lower is better)
Translates to: ETARRFCSARTS*WWCGSQAADLG
Trigger: TCCGAGGTCCGCAGCCTGGGACCCGCACCACCACCACGAAGTTCTCGCAGAGCAAAAACGCCGGGCCGTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528378.5
CDS TCA 72 bp CCTCCTGTGCCCGGTCTCCTGGAGATCCGATGGAGCTaGCTCCAGTCCATCTGTCGTCGTGCCCGCTTCCGC +
Preference number: 6 (lower is better)
Translates to: PPVPGLLEIRWS*LQSICRRARFR
Trigger: GCGGAAGCGGGCACGACGACAGATGGACTGGAGTCAGCTCCATCGGATCTCCAGGAGACCGGGCACAGGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528378.5
CDS GCA 72 bp TTGCTGGGACCTGCCCCTGAGACGGCCCGGCGTTTTTaGTCTGCGAGAACTTCGTGGTGGTGGTGCGGGTCC +
Preference number: 6 (lower is better)
Translates to: LLGPAPETARRF*SARTSWWWCGS
Trigger: GGACCCGCACCACCACCACGAAGTTCTCGCAGAGCAAAAACGCCGGGCCGTCTCAGGGGCAGGTCCCAGCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528378.5
CDS CCA 72 bp ACGGCCCGGCGTTTTTGCTCTGCGAGAACTTCGTGGTaGTGGTGCGGGTCCCAGGCTGCGGACCTCGGAACT +
Preference number: 6 (lower is better)
Translates to: TARRFCSARTSW*WCGSQAADLGT
Trigger: AGTTCCGAGGTCCGCAGCCTGGGACCCGCACCACCACCACGAAGTTCTCGCAGAGCAAAAACGCCGGGCCGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528378.5
CDS CCA 72 bp GGGGCAGGTGGAACAGGGTCCATGTCTTTGCCTCTGTaGCCTGGAGCCTGTGGCATGCCCTCCCTTAGGACC +
Preference number: 6 (lower is better)
Translates to: GAGGTGSMSLPL*PGACGMPSLRT
Trigger: GGTCCTAAGGGAGGGCATGCCACAGGCTCCAGGCCACAGAGGCAAAGACATGGACCCTGTTCCACCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264020.6
ENST00000530872.5
ENST00000534114.5
CDS TCA 72 bp ACCAGCTGGACTCCCTCGTTTGCTGGGACCTGCCCCTaGGACGGCCCGGCGTTTTTGCTCTGCGAGAACTTC +
Preference number: 6 (lower is better)
Translates to: TSWTPSFAGTCP*DGPAFLLCENF
Trigger: GAAGTTCTCGCAGAGCAAAAACGCCGGGCCGTCTCAGGGGCAGGTCCCAGCAAACGAGGGAGTCCAGCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528378.5
CDS CAA 90 bp TGGCACTTGAGACTTGCAGGGGCAGGTGGAACAGGGTCCATGTCTTaGCCTCTGTGGCCTGGAGCCTGTGGCATGCCCTCCCTTAGGACC +
Preference number: 6 (lower is better)
Translates to: WHLRLAGAGGTGSMS*PLWPGACGMPSLRT
Trigger: GGTCCTAAGGGAGGGCATGCCACAGGCTCCAGGCCACAGAGGCAAAGACATGGACCCTGTTCCACCTGCCCCTGCAAGTCTCAAGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264020.6
ENST00000530872.5
ENST00000534114.5
CDS GCA 72 bp ATTCGCGAGAGTTGCTTCCACTCTCGTGAGACCTCCTaGGCGTTAAGCCTCACCCGCGAAGGCTCTCCACGC +
Preference number: 6 (lower is better)
Translates to: IRESCFHSRETS*ALSLTREGSPR
Trigger: GCGTGGAGAGCCTTCGCGGGTGAGGCTTAACGCGCAGGAGGTCTCACGAGAGTGGAAGCAACTCTCGCGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264020.6
CDS TCA 72 bp CCCTCTCAAGTACATGAGAAGGGGTCTGGTGGCACTTaGGACTTGCAGGGGCAGGTGGAACAGGGTCCATGT +
Preference number: 6 (lower is better)
Translates to: PSQVHEKGSGGT*DLQGQVEQGPC
Trigger: ACATGGACCCTGTTCCACCTGCCCCTGCAAGTCTCAAGTGCCACCAGACCCCTTCTCATGTACTTGAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264020.6
ENST00000530872.5
ENST00000534114.5
CDS GCA 72 bp TTGCCCAAAAGCTCTTCAAACTCCGGGGACCATTCCTaGATCAGCGTGTCAATGTCGGGCATGGGCCTGGTG +
Preference number: 6 (lower is better)
Translates to: LPKSSSNSGDHS*ISVSMSGMGLV
Trigger: CACCAGGCCCATGCCCGACATTGACACGCTGATGCAGGAATGGTCCCCGGAGTTTGAAGAGCTTTTGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000525060.1
ENST00000530872.5
ENST00000531201.5
ENST00000672656.2
CDS GCA 72 bp ACGCAGGAGGTCTGCTTAAACCCAGGAGTTCGAGGCTaGAGTGAGCAGTGTCCAGTGTTCATGCTGCTGCAC +
Preference number: 6 (lower is better)
Translates to: TQEVCLNPGVRG*SEQCPVFMLLH
Trigger: GTGCAGCAGCATGAACACTGGACACTGCTCACTGCAGCCTCGAACTCCTGGGTTTAAGCAGACCTCCTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527868.1
ENST00000531939.5
CDS CAA 72 bp CCCGGGCAACAGAGTGAGAGCCTTGGTGTCTTGGGGTaGGAGTATAAATACTTGCAACCTCTTCGGAGTCGT +
Preference number: 6 (lower is better)
Translates to: PGQQSESLGVLG*EYKYLQPLRSR
Trigger: ACGACTCCGAAGAGGTTGCAAGTATTTATACTCCAACCCCAAGACACCAAGGCTCTCACTCTGTTGCCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527868.1
CDS GCA 72 bp CTTAATTTCAGCAGAAACTGGCAAATGCTCATAGTCTaGAGGGTCATAGGCCCCTTCCAGAGGGGCTCCATG +
Preference number: 6 (lower is better)
Translates to: LNFSRNWQMLIV*RVIGPFQRGSM
Trigger: CATGGAGCCCCTCTGGAAGGGGCCTATGACCCTGCAGACTATGAGCATTTGCCAGTTTCTGCTGAAATTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000528378.5
ENST00000530872.5
ENST00000531201.5
ENST00000531939.5
ENST00000534114.5
ENST00000534156.5
ENST00000672656.2
CDS CCA 72 bp CCGGGCAACAGAGTGAGAGCCTTGGTGTCTTGGGGTTaGAGTATAAATACTTGCAACCTCTTCGGAGTCGTT +
Preference number: 6 (lower is better)
Translates to: PGNRVRALVSWG*SINTCNLFGVV
Trigger: AACGACTCCGAAGAGGTTGCAAGTATTTATACTCCAACCCCAAGACACCAAGGCTCTCACTCTGTTGCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527868.1
CDS CCA 72 bp CTGGCAAATGCTCATAGTCTGCAGGGTCATAGGCCCTaGGAAAAGGAAAACAGTTTGTTCGAGGTGGCCAGA +
Preference number: 6 (lower is better)
Translates to: LANAHSLQGHRP*EKENSLFEVAR
Trigger: TCTGGCCACCTCGAACAAACTGTTTTCCTTTTCCCAGGGCCTATGACCCTGCAGACTATGAGCATTTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525060.1
CDS GCA 72 bp AGAGCTTTAAAATGCACAGATCATGTCAATGTACTCTaGCAGGCTGCAATCAATCTCTGCCGTGGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: RALKCTDHVNVL*QAAINLCRGQA
Trigger: AGCCTGCCCACGGCAGAGATTGATTGCAGCCTGGCAGAGTACATTGACATGATCTGTGCATTTTAAAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530872.5
CDS CAA 72 bp TCTTCACACTCATCACTGCTGTTATCAGCCATAGCCTaGTTAGGAAGATGGGCAGAACGAGGAAGTCCTTGG +
Preference number: 6 (lower is better)
Translates to: SSHSSLLLSAIA*LGRWAERGSPW
Trigger: CCAAGGACTTCCTCGTTCTGCCCATCTTCCTAACAAGGCTATGGCTGATAACAGCAGTGATGAGTGTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000528378.5
ENST00000530185.1
ENST00000530872.5
ENST00000533918.5
ENST00000534114.5
ENST00000534156.5
ENST00000672656.2
CDS CAA 90 bp CAGCTGAAGGTTAATGTCTCCATGTCTCCAGCTTGGGAGGTGGAATaGGATGAAGGAGTGAATGCTTTCTTGCCTTCAGCGAGAGCTTTA +
Preference number: 6 (lower is better)
Translates to: QLKVNVSMSPAWEVE*DEGVNAFLPSARAL
Trigger: TAAAGCTCTCGCTGAAGGCAAGAAAGCATTCACTCCTTCATCCAATTCCACCTCCCAAGCTGGAGACATGGAGACATTAACCTTCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000530872.5
ENST00000531201.5
ENST00000672656.2
CDS GCA 72 bp TCTGTTAACCAGAGTGAGAGCACCGTAGGGTCTGACTaGTTTGTAGAAGGTTCATCCAATACCAATAGGCCA +
Preference number: 6 (lower is better)
Translates to: SVNQSESTVGSD*FVEGSSNTNRP
Trigger: TGGCCTATTGGTATTGGATGAACCTTCTACAAAGCAGTCAGACCCTACGGTGCTCTCACTCTGGTTAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000525060.1
ENST00000530872.5
ENST00000531201.5
ENST00000531939.5
ENST00000534156.5
ENST00000672656.2
CDS CCA 72 bp TCGGAGTCGTTAATCTCTAGACGCTCATCATATGTCTaGTTTTCAACAACCTTGGTCGTCTCTCCTTGTCGG +
Preference number: 6 (lower is better)
Translates to: SESLISRRSSYV*FSTTLVVSPCR
Trigger: CCGACAAGGAGAGACGACCAAGGTTGTTGAAAACCAGACATATGATGAGCGTCTAGAGATTAACGACTCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528378.5
ENST00000534114.5
CDS CAA 90 bp TCTGACTGCTTTGTAGAAGGTTCATCCAATACCAATAGGCCAAGGTaGTCAGGCTTTCCATCAGGACGTGGGACCTTTAAGAATGCATCA +
Preference number: 6 (lower is better)
Translates to: SDCFVEGSSNTNRPR*SGFPSGRGTFKNAS
Trigger: TGATGCATTCTTAAAGGTCCCACGTCCTGATGGAAAGCCTGACAACCTTGGCCTATTGGTATTGGATGAACCTTCTACAAAGCAGTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000525060.1
ENST00000530872.5
ENST00000531201.5
ENST00000531939.5
ENST00000534156.5
ENST00000672656.2
CDS CAA 72 bp TTTGTAGAAGGTTCATCCAATACCAATAGGCCAAGGTaGTCAGGCTTTCCATCAGGACGTGGGACCTTTAAG +
Preference number: 6 (lower is better)
Translates to: FVEGSSNTNRPR*SGFPSGRGTFK
Trigger: CTTAAAGGTCCCACGTCCTGATGGAAAGCCTGACAACCTTGGCCTATTGGTATTGGATGAACCTTCTACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000525060.1
ENST00000530872.5
ENST00000531201.5
ENST00000531939.5
ENST00000534156.5
ENST00000672656.2
CDS CAA 90 bp TCTCCAGCTTGGGAGGTGGAATTGGATGAAGGAGTGAATGCTTTCTaGCCTTCAGCGAGAGCTTTAAAATGCTGTGAGTTCTTGAATTCT +
Preference number: 6 (lower is better)
Translates to: SPAWEVELDEGVNAF*PSARALKCCEFLNS
Trigger: AGAATTCAAGAACTCACAGCATTTTAAAGCTCTCGCTGAAGGCAAGAAAGCATTCACTCCTTCATCCAATTCCACCTCCCAAGCTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000531201.5
ENST00000672656.2
CDS CAA 90 bp TCTCCAGCTTGGGAGGTGGAATTGGATGAAGGAGTGAATGCTTTCTaGCCTTCAGCGAGAGCTTTAAAATGCACAGATCATGTCAATGTA +
Preference number: 6 (lower is better)
Translates to: SPAWEVELDEGVNAF*PSARALKCTDHVNV
Trigger: TACATTGACATGATCTGTGCATTTTAAAGCTCTCGCTGAAGGCAAGAAAGCATTCACTCCTTCATCCAATTCCACCTCCCAAGCTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530872.5
CDS GCA 72 bp CTTCTGCCTCTCCAATATCTGCCTTTCCTGGTGGCTTaGAAGGCAACTTTAAGGTTGATTGTACTTAACTCT +
Preference number: 6 (lower is better)
Translates to: LLPLQYLPFLVA*KATLRLIVLNS
Trigger: AGAGTTAAGTACAATCAACCTTAAAGTTGCCTTGCAAGCCACCAGGAAAGGCAGATATTGGAGAGGCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525060.1
CDS GCA 72 bp CTTAATTTCAGCAGAAACTGGCAAATGCTCATAGTCTaGAGGGTCATAGGCCCTGGGAAAAGGAAAACAGTT +
Preference number: 6 (lower is better)
Translates to: LNFSRNWQMLIV*RVIGPGKRKTV
Trigger: AACTGTTTTCCTTTTCCCAGGGCCTATGACCCTGCAGACTATGAGCATTTGCCAGTTTCTGCTGAAATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525060.1
CDS CCA 72 bp TCGGAGTCGTTAATCTCTAGACGCTCATCATATGTCTaGTTTTCAACAACCTTGGTCTGTAGCCCTTCTGAA +
Preference number: 6 (lower is better)
Translates to: SESLISRRSSYV*FSTTLVCSPSE
Trigger: TTCAGAAGGGCTACAGACCAAGGTTGTTGAAAACCAGACATATGATGAGCGTCTAGAGATTAACGACTCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000527868.1
ENST00000530872.5
ENST00000533918.5
ENST00000672656.2
CDS CAA 72 bp TTTTCAACAACCTTGGTCTCCACTTTCACCCTTATCTaGCAGATAGGATCCCACCTAAGTTTCTTGGGGGAA +
Preference number: 6 (lower is better)
Translates to: FSTTLVSTFTLI*QIGSHLSFLGE
Trigger: TTCCCCCAAGAAACTTAGGTGGGATCCTATCTGCAAGATAAGGGTGAAAGTGGAGACCAAGGTTGTTGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534156.5
CDS TCA 72 bp GGTTTATTGGAACATCTGGCTAAAGAGACAGGAGACTaGATTCTAGTCATGGCTCTGCCAGTTCAATTCAAG +
Preference number: 6 (lower is better)
Translates to: GLLEHLAKETGD*ILVMALPVQFK
Trigger: CTTGAATTGAACTGGCAGAGCCATGACTAGAATTCAGTCTCCTGTCTCTTTAGCCAGATGTTCCAATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531939.5
CDS CAA 72 bp AATTCAGAGATGCTCTCAATCCACGTGTCAATGGCTTaGGGATTCTTTTCTGCATCTTCTAGGCTTTTTACT +
Preference number: 6 (lower is better)
Translates to: NSEMLSIHVSMA*GFFSASSRLFT
Trigger: AGTAAAAAGCCTAGAAGATGCAGAAAAGAATCCCAAAGCCATTGACACGTGGATTGAGAGCATCTCTGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264020.6
ENST00000264021.8
ENST00000525060.1
ENST00000530872.5
ENST00000531201.5
ENST00000531939.5
ENST00000534156.5
ENST00000672656.2