Pregenerated sensors for IFT43 (Homo sapiens)
Ensembl gene IDs: ENSG00000119650Ensembl transcript IDs: ENST00000238628.10, ENST00000314067.11, ENST00000542766.5, ENST00000553338.1, ENST00000553438.1, ENST00000554026.5, ENST00000554233.1, ENST00000554423.1, ENST00000555305.5, ENST00000555370.5, ENST00000555677.5, ENST00000556742.1, ENST00000679083.1
Found 228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTAGGAGTGCCCACTCCTTCTCCGCCTGAATCGAACTCTCCCACATaGTCCGCAACAAGGCCGCGAGTTCTGAGTTCCTATCAGCTGGTT | + |
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Preference number: 1 (lower is better) Translates to: VGVPTPSPPESNSPT*SATRPRVLSSYQLV Trigger: AACCAGCTGATAGGAACTCAGAACTCGCGGCCTTGTTGCGGAGCATGTGGGAGAGTTCGATTCAGGCGGAGAAGGAGTGGGCACTCCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| 3UTR TCA 90 bp | CTGAATCGAACTCTCCCACATGCTCCGCAACAAGGCCGCGAGTTCTaGGTTCCTATCAGCTGGTTTAAAAGCTGTTCTCCTTCACTTGTG | + |
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Preference number: 1 (lower is better) Translates to: LNRTLPHAPQQGREF*VPISWFKSCSPSLV Trigger: CACAAGTGAAGGAGAACAGCTTTTAAACCAGCTGATAGGAACTCAGAACTCGCGGCCTTGTTGCGGAGCATGTGGGAGAGTTCGATTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| 3UTR GCA 90 bp | TATAAGTCTTATGAGAAGGCAAGGCTTAGAAGCTGGTATTGCTTCTaGCCATCTATATCAATAATGCAGAAGGCATGGGCCAGTACCCTG | + |
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Preference number: 1 (lower is better) Translates to: YKSYEKARLRSWYCF*PSISIMQKAWASTL Trigger: CAGGGTACTGGCCCATGCCTTCTGCATTATTGATATAGATGGGCAGAAGCAATACCAGCTTCTAAGCCTTGCCTTCTCATAAGACTTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| 3UTR CCA 90 bp | AGCTGGTATTGCTTCTGCCCATCTATATCAATAATGCAGAAGGCATaGGCCAGTACCCTGATACCTGGACATATAATTCTAAAACCACAC | + |
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Preference number: 1 (lower is better) Translates to: SWYCFCPSISIMQKA*ASTLIPGHIILKPH Trigger: GTGTGGTTTTAGAATTATATGTCCAGGTATCAGGGTACTGGCCCATGCCTTCTGCATTATTGATATAGATGGGCAGAAGCAATACCAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| 3UTR-3UTR TCA 90 bp | ACTAAGGTCACAAAGGGCCCAGAGCACCCACGGGAAGGGAGGCCCCGCCCCAGACACTCCTTCTCCGCCTaGATCGAACTCTCCCACATG | + |
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Preference number: 2 (lower is better) Translates to: TKVTKGPEHPREGRPRPRHSFSA*IELSHM Trigger: CATGTGGGAGAGTTCGATTCAGGCGGAGAAGGAGTG...TCTGGGGCGGGGCCTCCCTTCCCGTGGGTGCTCTGGGCCCTTTGTGACCTTAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| 3UTR-3UTR GCA 90 bp | GCAGGTGGCAGTGCTGCGTCACTAAGGTCACAAAGGGCCCAGAGCACCCACGGGTCGAACTCTCCCACATaGTCCGCAACAAGGCCGCGA | + |
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Preference number: 2 (lower is better) Translates to: AGGSAASLRSQRAQSTHGSNSPT*SATRPR Trigger: TCGCGGCCTTGTTGCGGAGCATGTGGGAGAGTTCGA...CCCGTGGGTGCTCTGGGCCCTTTGTGACCTTAGTGACGCAGCACTGCCACCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| 3UTR-3UTR TCA 90 bp | TGCTGCGTCACTAAGGTCACAAAGGGCCCAGAGCACCCACGGGAAGGGAGGCCCCAGCAGGCAACTGTTTaGAACCTCCCGAGAAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: CCVTKVTKGPEHPREGRPQQATV*NLPRSE Trigger: TTCACTTCTCGGGAGGTTTCAAACAGTTGCCTGCTG...GGGCCTCCCTTCCCGTGGGTGCTCTGGGCCCTTTGTGACCTTAGTGACGCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| 3UTR-3UTR TCA 90 bp | CTCCGCTGCAGCTGCCTGGAAGCCTATGATGCAGGTGGCAGTGCTGCGTCACTACAAGGCCGCGAGTTCTaGGTTCCTATCAGCTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: LRCSCLEAYDAGGSAASLQGREF*VPISWF Trigger: AAACCAGCTGATAGGAACTCAGAACTCGCGGCCTTG...TAGTGACGCAGCACTGCCACCTGCATCATAGGCTTCCAGGCAGCTGCAGCGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCGCTGCAGCTGCCTGGAAGCCTATGATGCAGGTGGCAGTGCTGCGTCACAAACCTCCCGAGAAGTaGACAGCTTTCAGTAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: PSAAAAWKPMMQVAVLRHKPPEK*TAFSRS Trigger: ACTCCTACTGAAAGCTGTTCACTTCTCGGGAGGTTT...GTGACGCAGCACTGCCACCTGCATCATAGGCTTCCAGGCAGCTGCAGCGGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| 3UTR-3UTR CCA 90 bp | ATGCAGCTTCCGCCCCTGGGAGTAGGAAACTGGGTGGCCCTACCTTCACAGCACGCAAGGCTTAGAAGCTaGTATTGCTTCTGCCCATCT | + |
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Preference number: 2 (lower is better) Translates to: MQLPPLGVGNWVALPSQHARLRS*YCFCPS Trigger: AGATGGGCAGAAGCAATACCAGCTTCTAAGCCTTGC...GTGCTGTGAAGGTAGGGCCACCCAGTTTCCTACTCCCAGGGGCGGAAGCTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| 3UTR-3UTR TCA 90 bp | CTCCGCTGCAGCTGCCTGGAAGCCTATGATGCAGGTGGCAGTGCTGCGTCACTAGTTCTCCTTCACTTGTaGTACATTTTCCAAGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: LRCSCLEAYDAGGSAASLVLLHL*YIFQEE Trigger: CTCTTCTTGGAAAATGTATCACAAGTGAAGGAGAAC...TAGTGACGCAGCACTGCCACCTGCATCATAGGCTTCCAGGCAGCTGCAGCGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| 3UTR-3UTR GCA 90 bp | ATGCAGCTTCCGCCCCTGGGAGTAGGAAACTGGGTGGCCCTACCTTCACAGCACCTTAGAAGCTGGTATTaGTTCTGCCCATCTATATCA | + |
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Preference number: 2 (lower is better) Translates to: MQLPPLGVGNWVALPSQHLRSWY*FCPSIS Trigger: TGATATAGATGGGCAGAAGCAATACCAGCTTCTAAG...GTGCTGTGAAGGTAGGGCCACCCAGTTTCCTACTCCCAGGGGCGGAAGCTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| 3UTR-3UTR CCA 90 bp | ATGCAGCTTCCGCCCCTGGGAGTAGGAAACTGGGTGGCCCTACCTTCACAGCACGGATTAACCAAACCTTaGATTCAGCAGGCATCAATA | + |
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Preference number: 2 (lower is better) Translates to: MQLPPLGVGNWVALPSQHGLTKP*IQQASI Trigger: TATTGATGCCTGCTGAATCCAAGGTTTGGTTAATCC...GTGCTGTGAAGGTAGGGCCACCCAGTTTCCTACTCCCAGGGGCGGAAGCTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCTGTGCGATGCACTATTCCAGAGGACAGCATCACAGAGGCTATGACATGATAATGCAGAAGGCATaGGCCAGTACCCTGATACCT | + |
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Preference number: 2 (lower is better) Translates to: TGCAMHYSRGQHHRGYDMIMQKA*ASTLIP Trigger: AGGTATCAGGGTACTGGCCCATGCCTTCTGCATTAT...CATGTCATAGCCTCTGTGATGCTGTCCTCTGGAATAGTGCATCGCACAGCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCTGTGCGATGCACTATTCCAGAGGACAGCATCACAGAGGCTATGACATGTCTAAAACCACACAGTaGGAGATAGGACATGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: TGCAMHYSRGQHHRGYDMSKTTQ*EIGHGH Trigger: ATGCCCATGTCCTATCTCCCACTGTGTGGTTTTAGA...CATGTCATAGCCTCTGTGATGCTGTCCTCTGGAATAGTGCATCGCACAGCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| 3UTR-3UTR GCA 90 bp | ATAAGTCTTATGAGAAGGCAAGGCTTAGAAGCTGGTATTGCTTCTGCCCATCTAGGACATGGGCATCAATaGCAGGGTCCAGACCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: ISLMRRQGLEAGIASAHLGHGHQ*QGPDLQ Trigger: CTGAAGGTCTGGACCCTGGCATTGATGCCCATGTCC...TAGATGGGCAGAAGCAATACCAGCTTCTAAGCCTTGCCTTCTCATAAGACTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| 3UTR TCA 72 bp | ACAGCTTTCAGTAGGAGTGCCCACTCCTTCTCCGCCTaGATCGAACTCTCCCACATGCTCCGCAACAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: TAFSRSAHSFSA*IELSHMLRNKA Trigger: GGCCTTGTTGCGGAGCATGTGGGAGAGTTCGATTCAGGCGGAGAAGGAGTGGGCACTCCTACTGAAAGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| 3UTR GCA 72 bp | CTGGGTGTGCCGTGTGTGGTTGCACAGGCTGTGCGATaGACTATTCCAGAGGACAGCATCACAGAGGCTATG | + |
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Preference number: 3 (lower is better) Translates to: LGVPCVVAQAVR*TIPEDSITEAM Trigger: CATAGCCTCTGTGATGCTGTCCTCTGGAATAGTGCATCGCACAGCCTGTGCAACCACACACGGCACACCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| 3UTR GCA 72 bp | CCCACTCCTTCTCCGCCTGAATCGAACTCTCCCACATaGTCCGCAACAAGGCCGCGAGTTCTGAGTTCCTAT | + |
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Preference number: 3 (lower is better) Translates to: PTPSPPESNSPT*SATRPRVLSSY Trigger: ATAGGAACTCAGAACTCGCGGCCTTGTTGCGGAGCATGTGGGAGAGTTCGATTCAGGCGGAGAAGGAGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| 3UTR TCA 72 bp | ACCCCAGCAGGCAACTGTTTGAAACCTCCCGAGAAGTaGACAGCTTTCAGTAGGAGTGCCCACTCCTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: TPAGNCLKPPEK*TAFSRSAHSFS Trigger: GGAGAAGGAGTGGGCACTCCTACTGAAAGCTGTTCACTTCTCGGGAGGTTTCAAACAGTTGCCTGCTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| 3UTR TCA 72 bp | ACTATTCCAGAGGACAGCATCACAGAGGCTATGACATaGATGCAGCTTCCGCCCCTGGGAGTAGGAAACTGG | + |
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Preference number: 3 (lower is better) Translates to: TIPEDSITEAMT*MQLPPLGVGNW Trigger: CCAGTTTCCTACTCCCAGGGGCGGAAGCTGCATTCATGTCATAGCCTCTGTGATGCTGTCCTCTGGAATAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| 3UTR GCA 72 bp | AAAACCACACAGTGGGAGATAGGACATGGGCATCAATaGCAGGGTCCAGACCTTCAGTTGAGGAAGCGGGAT | + |
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Preference number: 3 (lower is better) Translates to: KTTQWEIGHGHQ*QGPDLQLRKRD Trigger: ATCCCGCTTCCTCAACTGAAGGTCTGGACCCTGGCATTGATGCCCATGTCCTATCTCCCACTGTGTGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| 3UTR TCA 72 bp | ACTCTCCCACATGCTCCGCAACAAGGCCGCGAGTTCTaGGTTCCTATCAGCTGGTTTAAAAGCTGTTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: TLPHAPQQGREF*VPISWFKSCSP Trigger: AGGAGAACAGCTTTTAAACCAGCTGATAGGAACTCAGAACTCGCGGCCTTGTTGCGGAGCATGTGGGAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| 3UTR CCA 72 bp | AGACCTTCAGTTGAGGAAGCGGGATTAACCAAACCTTaGATTCAGCAGGCATCAATAATTCTAGCCCCAGAC | + |
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Preference number: 3 (lower is better) Translates to: RPSVEEAGLTKP*IQQASIILAPD Trigger: GTCTGGGGCTAGAATTATTGATGCCTGCTGAATCCAAGGTTTGGTTAATCCCGCTTCCTCAACTGAAGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| 3UTR CCA 72 bp | CCTGATACCTGGACATATAATTCTAAAACCACACAGTaGGAGATAGGACATGGGCATCAATGCCAGGGTCCA | + |
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Preference number: 3 (lower is better) Translates to: PDTWTYNSKTTQ*EIGHGHQCQGP Trigger: TGGACCCTGGCATTGATGCCCATGTCCTATCTCCCACTGTGTGGTTTTAGAATTATATGTCCAGGTATCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| 3UTR-3UTR CAA 90 bp | GAAGGCATGGGCCAGTACCCTGATACCTGGACATATAATTCTAAAACCACACAGGGGATTAACCAAACCTaGGATTCAGCAGGCATCAAT | + |
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Preference number: 3 (lower is better) Translates to: EGMGQYPDTWTYNSKTTQGINQT*DSAGIN Trigger: ATTGATGCCTGCTGAATCCAAGGTTTGGTTAATCCC...CTGTGTGGTTTTAGAATTATATGTCCAGGTATCAGGGTACTGGCCCATGCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| 3UTR GCA 72 bp | TATGAGAAGGCAAGGCTTAGAAGCTGGTATTGCTTCTaGCCATCTATATCAATAATGCAGAAGGCATGGGCC | + |
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Preference number: 3 (lower is better) Translates to: YEKARLRSWYCF*PSISIMQKAWA Trigger: GGCCCATGCCTTCTGCATTATTGATATAGATGGGCAGAAGCAATACCAGCTTCTAAGCCTTGCCTTCTCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| 3UTR CCA 72 bp | TGCTTCTGCCCATCTATATCAATAATGCAGAAGGCATaGGCCAGTACCCTGATACCTGGACATATAATTCTA | + |
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Preference number: 3 (lower is better) Translates to: CFCPSISIMQKA*ASTLIPGHIIL Trigger: TAGAATTATATGTCCAGGTATCAGGGTACTGGCCCATGCCTTCTGCATTATTGATATAGATGGGCAGAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| 3UTR GCA 72 bp | AAGTCTTATGAGAAGGCAAGGCTTAGAAGCTGGTATTaGTTCTGCCCATCTATATCAATAATGCAGAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: KSYEKARLRSWY*FCPSISIMQKA Trigger: TGCCTTCTGCATTATTGATATAGATGGGCAGAAGCAATACCAGCTTCTAAGCCTTGCCTTCTCATAAGACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| CDS-3UTR GCA 90 bp | ACTAAGGTCACAAAGGGCCCAGAGCACCCACGGGAAGGGAGGCCCCGCCCCAGATCCTCCCGGACTTCGTaGTCCGGCGCGAGCACTTTG | + |
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Preference number: 4 (lower is better) Translates to: TKVTKGPEHPREGRPRPRSSRTS*SGASTL Trigger: CAAAGTGCTCGCGCCGGAGCACGAAGTCCGGGAGGA...TCTGGGGCGGGGCCTCCCTTCCCGTGGGTGCTCTGGGCCCTTTGTGACCTTAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR TCA 90 bp | TGCTGCGTCACTAAGGTCACAAAGGGCCCAGAGCACCCACGGGAAGGGAGGCCCATTCTCGGCCTGCGCTaGCTCCTGTTGAGCTCGGCG | + |
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Preference number: 4 (lower is better) Translates to: CCVTKVTKGPEHPREGRPILGLR*LLLSSA Trigger: CGCCGAGCTCAACAGGAGTCAGCGCAGGCCGAGAAT...GGGCCTCCCTTCCCGTGGGTGCTCTGGGCCCTTTGTGACCTTAGTGACGCAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR TCA 90 bp | ACTAAGGTCACAAAGGGCCCAGAGCACCCACGGGAAGGGAGGCCCCGCCCCAGATGTCTAGAGCATGGGTaGCGGGCTCAGGTGTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: TKVTKGPEHPREGRPRPRCLEHG*RAQVCL Trigger: CAGGCACACCTGAGCCCGTCACCCATGCTCTAGACA...TCTGGGGCGGGGCCTCCCTTCCCGTGGGTGCTCTGGGCCCTTTGTGACCTTAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR TCA 90 bp | ACTAAGGTCACAAAGGGCCCAGAGCACCCACGGGAAGGGAGGCCCCGCCCCAGACTGCCTGGAAGCCTATaGTGCAGGTGGCAGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TKVTKGPEHPREGRPRPRLPGSL*CRWQCC Trigger: GCAGCACTGCCACCTGCATCATAGGCTTCCAGGCAG...TCTGGGGCGGGGCCTCCCTTCCCGTGGGTGCTCTGGGCCCTTTGTGACCTTAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR TCA 90 bp | TGCTGCGTCACTAAGGTCACAAAGGGCCCAGAGCACCCACGGGAAGGGAGGCCCGTGGGTCCCACTCAGTaGGGACCTCTGAGGACACCT | + |
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Preference number: 4 (lower is better) Translates to: CCVTKVTKGPEHPREGRPVGPTQ*GPLRTP Trigger: AGGTGTCCTCAGAGGTCCTCACTGAGTGGGACCCAC...GGGCCTCCCTTCCCGTGGGTGCTCTGGGCCCTTTGTGACCTTAGTGACGCAGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR GCA 90 bp | TGCAGGTGGCAGTGCTGCGTCACTAAGGTCACAAAGGGCCCAGAGCACCCACGGGCCTCCTCCCTCCGCTaGAGCTGCCTGGAAGCCTAT | + |
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Preference number: 4 (lower is better) Translates to: CRWQCCVTKVTKGPEHPRASSLR*SCLEAY Trigger: ATAGGCTTCCAGGCAGCTGCAGCGGAGGGAGGAGGC...CCGTGGGTGCTCTGGGCCCTTTGTGACCTTAGTGACGCAGCACTGCCACCTGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR GCA 90 bp | GCAGGTGGCAGTGCTGCGTCACTAAGGTCACAAAGGGCCCAGAGCACCCACGGGTCCTCCTTCTCCGTCTaGAGTGGGTCCCACTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: AGGSAASLRSQRAQSTHGSSFSV*SGSHSV Trigger: CACTGAGTGGGACCCACTGCAGACGGAGAAGGAGGA...CCCGTGGGTGCTCTGGGCCCTTTGTGACCTTAGTGACGCAGCACTGCCACCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR CCA 90 bp | TGCTGCGTCACTAAGGTCACAAAGGGCCCAGAGCACCCACGGGAAGGGAGGCCCGCTTTATCTGGATGCTaGGAGGGGCTGCCACCTGCA | + |
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Preference number: 4 (lower is better) Translates to: CCVTKVTKGPEHPREGRPALSGC*EGLPPA Trigger: TGCAGGTGGCAGCCCCTCCCAGCATCCAGATAAAGC...GGGCCTCCCTTCCCGTGGGTGCTCTGGGCCCTTTGTGACCTTAGTGACGCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR CCA 90 bp | CCGAGAAGTGAACAGCTTTCAGTAGGAGTGCCCACTCCTTCTCCGCCTGAATCGGGGCTCAGGTGTGCCTaGCCTGCCCCGCAGGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PRSEQLSVGVPTPSPPESGLRCA*PAPQGP Trigger: AGGACCCTGCGGGGCAGGCCAGGCACACCTGAGCCC...CGATTCAGGCGGAGAAGGAGTGGGCACTCCTACTGAAAGCTGTTCACTTCTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR TCA 90 bp | CCCTCCGCTGCAGCTGCCTGGAAGCCTATGATGCAGGTGGCAGTGCTGCGTCACGCGCGAGCACTTTGGTaGGGAGTTTCAGGTCGATCT | + |
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Preference number: 4 (lower is better) Translates to: PSAAAAWKPMMQVAVLRHARALW*GVSGRS Trigger: AGATCGACCTGAAACTCCTCACCAAAGTGCTCGCGC...GTGACGCAGCACTGCCACCTGCATCATAGGCTTCCAGGCAGCTGCAGCGGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR TCA 90 bp | GCTGCGTCACTAAGGTCACAAAGGGCCCAGAGCACCCACGGGAAGGGAGGCCCCCAAGGCCGCGAGTTCTaGGTTCCTATCAGCTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: AASLRSQRAQSTHGKGGPQGREF*VPISWF Trigger: AAACCAGCTGATAGGAACTCAGAACTCGCGGCCTTG...GGGGCCTCCCTTCCCGTGGGTGCTCTGGGCCCTTTGTGACCTTAGTGACGCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR GCA 90 bp | CCACTCCTTCTCCGCCTGAATCGAACTCTCCCACATGCTCCGCAACAAGGCCGCCTTCACGGAATCACCTaGCCAGCCTCCCTGTCGGCA | + |
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Preference number: 4 (lower is better) Translates to: PLLLRLNRTLPHAPQQGRLHGIT*PASLSA Trigger: TGCCGACAGGGAGGCTGGGCAGGTGATTCCGTGAAG...GCGGCCTTGTTGCGGAGCATGTGGGAGAGTTCGATTCAGGCGGAGAAGGAGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR TCA 90 bp | GTGCCCACTCCTTCTCCGCCTGAATCGAACTCTCCCACATGCTCCGCAACAAGGTGCGCTGACTCCTGTTaGGCTCGGCGACCCATCTTG | + |
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Preference number: 4 (lower is better) Translates to: VPTPSPPESNSPTCSATRCADSC*ARRPIL Trigger: CAAGATGGGTCGCCGAGCTCAACAGGAGTCAGCGCA...CCTTGTTGCGGAGCATGTGGGAGAGTTCGATTCAGGCGGAGAAGGAGTGGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR TCA 90 bp | ACTAAGGTCACAAAGGGCCCAGAGCACCCACGGGAAGGGAGGCCCCGCCCCAGATCCCCATCCAGTGTCTaGATGGCTGAGTACTTCATG | + |
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Preference number: 4 (lower is better) Translates to: TKVTKGPEHPREGRPRPRSPSSV*MAEYFM Trigger: CATGAAGTACTCAGCCATTCAGACACTGGATGGGGA...TCTGGGGCGGGGCCTCCCTTCCCGTGGGTGCTCTGGGCCCTTTGTGACCTTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR GCA 90 bp | GGCAGTGCTGCGTCACTAAGGTCACAAAGGGCCCAGAGCACCCACGGGAAGGGAGATGCTGGGAGGGGCTaGCACCTGCAAAACAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: GSAASLRSQRAQSTHGKGDAGRG*HLQNKV Trigger: GACTTTGTTTTGCAGGTGGCAGCCCCTCCCAGCATC...TCCCTTCCCGTGGGTGCTCTGGGCCCTTTGTGACCTTAGTGACGCAGCACTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR TCA 90 bp | ATGCAGCTTCCGCCCCTGGGAGTAGGAAACTGGGTGGCCCTACCTTCACAGCACAGGAATTCTTGCCATTaGGGTGATTCTCGGCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: MQLPPLGVGNWVALPSQHRNSCH*GDSRPA Trigger: CGCAGGCCGAGAATCACCTCAATGGCAAGAATTCCT...GTGCTGTGAAGGTAGGGCCACCCAGTTTCCTACTCCCAGGGGCGGAAGCTGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| CDS-3UTR GCA 90 bp | TATGATGCAGGTGGCAGTGCTGCGTCACTAAGGTCACAAAGGGCCCAGAGCACCTCGAACTCTCCCACATaGTCCGCAACAAGGCCGCGA | + |
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Preference number: 4 (lower is better) Translates to: YDAGGSAASLRSQRAQSTSNSPT*SATRPR Trigger: TCGCGGCCTTGTTGCGGAGCATGTGGGAGAGTTCGA...GGTGCTCTGGGCCCTTTGTGACCTTAGTGACGCAGCACTGCCACCTGCATCATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR CCA 90 bp | CCACTCCTTCTCCGCCTGAATCGAACTCTCCCACATGCTCCGCAACAAGGCCGCTTCATGTCTAGAGCATaGGTGACGGGCTCAGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: PLLLRLNRTLPHAPQQGRFMSRA*VTGSGV Trigger: CACACCTGAGCCCGTCACCCATGCTCTAGACATGAA...GCGGCCTTGTTGCGGAGCATGTGGGAGAGTTCGATTCAGGCGGAGAAGGAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR TCA 90 bp | TGGGCATCAATGCCAGGGTCCAGACCTTCAGTTGAGGAAGCGGGATTAACCAAAATTCTCGGCCTGCGCTaGCTCCTGTTGAGCTCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: WASMPGSRPSVEEAGLTKILGLR*LLLSSA Trigger: CGCCGAGCTCAACAGGAGTCAGCGCAGGCCGAGAAT...TTTGGTTAATCCCGCTTCCTCAACTGAAGGTCTGGACCCTGGCATTGATGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| CDS-3UTR TCA 90 bp | CTCTCCCACATGCTCCGCAACAAGGCCGCGAGTTCTGAGTTCCTATCAGCTGGTCACTCCTTCTCCGCCTaGATCGAACTCTCCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: LSHMLRNKAASSEFLSAGHSFSA*IELSHM Trigger: CATGTGGGAGAGTTCGATTCAGGCGGAGAAGGAGTG...ACCAGCTGATAGGAACTCAGAACTCGCGGCCTTGTTGCGGAGCATGTGGGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR GCA 90 bp | CAGCTTTCAGTAGGAGTGCCCACTCCTTCTCCGCCTGAATCGAACTCTCCCACATCCCTCCGCTGCAGCTaGCTGGAAGCCTATGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLSVGVPTPSPPESNSPTSLRCS*LEAYDA Trigger: TGCATCATAGGCTTCCAGGCAGCTGCAGCGGAGGGA...TGTGGGAGAGTTCGATTCAGGCGGAGAAGGAGTGGGCACTCCTACTGAAAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR TCA 90 bp | CCGAGAAGTGAACAGCTTTCAGTAGGAGTGCCCACTCCTTCTCCGCCTGAATCGCTCAGTGAGGACCTCTaGGGACACCTCAGTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PRSEQLSVGVPTPSPPESLSEDL*GHLSEQ Trigger: CTGTTCACTGAGGTGTCCTCAGAGGTCCTCACTGAG...CGATTCAGGCGGAGAAGGAGTGGGCACTCCTACTGAAAGCTGTTCACTTCTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR TCA 90 bp | CCACTCCTTCTCCGCCTGAATCGAACTCTCCCACATGCTCCGCAACAAGGCCGCATCTCCTCCATAATCTaGTCCATTCAGGCTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLLRLNRTLPHAPQQGRISSII*SIQALW Trigger: CCACAGAGCCTGAATGGATCAGATTATGGAGGAGAT...GCGGCCTTGTTGCGGAGCATGTGGGAGAGTTCGATTCAGGCGGAGAAGGAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR GCA 90 bp | CTCTCCCACATGCTCCGCAACAAGGCCGCGAGTTCTGAGTTCCTATCAGCTGGTTGCAGGTGGCAGTGCTaGGTCACTAAGGTCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSHMLRNKAASSEFLSAGCRWQC*VTKVTK Trigger: CTTTGTGACCTTAGTGACGCAGCACTGCCACCTGCA...ACCAGCTGATAGGAACTCAGAACTCGCGGCCTTGTTGCGGAGCATGTGGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR CCA 90 bp | GTGCCCACTCCTTCTCCGCCTGAATCGAACTCTCCCACATGCTCCGCAACAAGGTCCATTCAGGCTCTGTaGTCTGAGGCGGAAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPTPSPPESNSPTCSATRSIQAL*SEAEIF Trigger: GAAGATTTCCGCCTCAGACCACAGAGCCTGAATGGA...CCTTGTTGCGGAGCATGTGGGAGAGTTCGATTCAGGCGGAGAAGGAGTGGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR CCA 90 bp | TCCCACATGCTCCGCAACAAGGCCGCGAGTTCTGAGTTCCTATCAGCTGGTTTATCCGCTGCAGCTGCCTaGAAGCCTATGATGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHMLRNKAASSEFLSAGLSAAAA*KPMMQV Trigger: CACCTGCATCATAGGCTTCCAGGCAGCTGCAGCGGA...TAAACCAGCTGATAGGAACTCAGAACTCGCGGCCTTGTTGCGGAGCATGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR TCA 90 bp | TCCCACATGCTCCGCAACAAGGCCGCGAGTTCTGAGTTCCTATCAGCTGGTTTATTCTTGCCATTGAGGTaGTTCTCGGCCTGCGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SHMLRNKAASSEFLSAGLFLPLR*FSACAD Trigger: GTCAGCGCAGGCCGAGAATCACCTCAATGGCAAGAA...TAAACCAGCTGATAGGAACTCAGAACTCGCGGCCTTGTTGCGGAGCATGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR TCA 90 bp | GCACAGGCTGTGCGATGCACTATTCCAGAGGACAGCATCACAGAGGCTATGACATTCTTGCCATTGAGGTaGTTCTCGGCCTGCGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: AQAVRCTIPEDSITEAMTFLPLR*FSACAD Trigger: GTCAGCGCAGGCCGAGAATCACCTCAATGGCAAGAA...TGTCATAGCCTCTGTGATGCTGTCCTCTGGAATAGTGCATCGCACAGCCTGTGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| CDS-3UTR TCA 90 bp | CCGAGAAGTGAACAGCTTTCAGTAGGAGTGCCCACTCCTTCTCCGCCTGAATCGAGGAATTCTTGCCATTaGGGTGATTCTCGGCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PRSEQLSVGVPTPSPPESRNSCH*GDSRPA Trigger: CGCAGGCCGAGAATCACCTCAATGGCAAGAATTCCT...CGATTCAGGCGGAGAAGGAGTGGGCACTCCTACTGAAAGCTGTTCACTTCTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR TCA 90 bp | TATGATGCAGGTGGCAGTGCTGCGTCACTAAGGTCACAAAGGGCCCAGAGCACCCAGCAGGCAACTGTTTaGAACCTCCCGAGAAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YDAGGSAASLRSQRAQSTQQATV*NLPRSE Trigger: TTCACTTCTCGGGAGGTTTCAAACAGTTGCCTGCTG...GGTGCTCTGGGCCCTTTGTGACCTTAGTGACGCAGCACTGCCACCTGCATCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR CCA 90 bp | TCCCACATGCTCCGCAACAAGGCCGCGAGTTCTGAGTTCCTATCAGCTGGTTTAACCTCAGTGAACAGATaGTCCCAGTCCCAGCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: SHMLRNKAASSEFLSAGLTSVNR*SQSQPT Trigger: TGTCGGCTGGGACTGGGACCATCTGTTCACTGAGGT...TAAACCAGCTGATAGGAACTCAGAACTCGCGGCCTTGTTGCGGAGCATGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR TCA 90 bp | CTCTCCCACATGCTCCGCAACAAGGCCGCGAGTTCTGAGTTCCTATCAGCTGGTAAACCTCCCGAGAAGTaGACAGCTTTCAGTAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSHMLRNKAASSEFLSAGKPPEK*TAFSRS Trigger: ACTCCTACTGAAAGCTGTTCACTTCTCGGGAGGTTT...ACCAGCTGATAGGAACTCAGAACTCGCGGCCTTGTTGCGGAGCATGTGGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR CCA 90 bp | CACATGCTCCGCAACAAGGCCGCGAGTTCTGAGTTCCTATCAGCTGGTTTAAAACTTCTCCGTCTGCAGTaGGTCCCACTCAGTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HMLRNKAASSEFLSAGLKLLRLQ*VPLSED Trigger: GTCCTCACTGAGTGGGACCCACTGCAGACGGAGAAG...TTTTAAACCAGCTGATAGGAACTCAGAACTCGCGGCCTTGTTGCGGAGCATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR CCA 90 bp | AACCTAATTAGGCCACTGGGTGTGCCGTGTGTGGTTGCACAGGCTGTGCGATGCGCAAGGCTTAGAAGCTaGTATTGCTTCTGCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: NLIRPLGVPCVVAQAVRCARLRS*YCFCPS Trigger: AGATGGGCAGAAGCAATACCAGCTTCTAAGCCTTGC...GCATCGCACAGCCTGTGCAACCACACACGGCACACCCAGTGGCCTAATTAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| CDS-3UTR TCA 90 bp | AAGCTGGTATTGCTTCTGCCCATCTATATCAATAATGCAGAAGGCATGGGCCAGTGCGCTGACTCCTGTTaGGCTCGGCGACCCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KLVLLLPIYINNAEGMGQCADSC*ARRPIL Trigger: CAAGATGGGTCGCCGAGCTCAACAGGAGTCAGCGCA...CTGGCCCATGCCTTCTGCATTATTGATATAGATGGGCAGAAGCAATACCAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| CDS-3UTR TCA 90 bp | CCGAGAAGTGAACAGCTTTCAGTAGGAGTGCCCACTCCTTCTCCGCCTGAATCGTCAGGCTCTGTGGTCTaGGGCGGAAATCTTCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: PRSEQLSVGVPTPSPPESSGSVV*GGNLLF Trigger: AAATAGAAGATTTCCGCCTCAGACCACAGAGCCTGA...CGATTCAGGCGGAGAAGGAGTGGGCACTCCTACTGAAAGCTGTTCACTTCTCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR TCA 90 bp | GCACAGGCTGTGCGATGCACTATTCCAGAGGACAGCATCACAGAGGCTATGACAGTCCAGACCTTCAGTTaGGGAAGCGGGATTAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: AQAVRCTIPEDSITEAMTVQTFS*GSGINQ Trigger: TTGGTTAATCCCGCTTCCTCAACTGAAGGTCTGGAC...TGTCATAGCCTCTGTGATGCTGTCCTCTGGAATAGTGCATCGCACAGCCTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| CDS-3UTR TCA 90 bp | ACAGGCTGTGCGATGCACTATTCCAGAGGACAGCATCACAGAGGCTATGACATGGCATCACAGAGGCTATaGCATGAATGCAGCTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TGCAMHYSRGQHHRGYDMASQRL*HECSFR Trigger: GCGGAAGCTGCATTCATGTCATAGCCTCTGTGATGC...CATGTCATAGCCTCTGTGATGCTGTCCTCTGGAATAGTGCATCGCACAGCCTGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| CDS-3UTR GCA 90 bp | GCATCAATGCCAGGGTCCAGACCTTCAGTTGAGGAAGCGGGATTAACCAAACCTTGGTTGCACAGGCTGTaGGATGCACTATTCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASMPGSRPSVEEAGLTKPWLHRL*DALFQR Trigger: CCTCTGGAATAGTGCATCGCACAGCCTGTGCAACCA...AGGTTTGGTTAATCCCGCTTCCTCAACTGAAGGTCTGGACCCTGGCATTGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| CDS-3UTR TCA 90 bp | ACAGGCTGTGCGATGCACTATTCCAGAGGACAGCATCACAGAGGCTATGACATGAGGTGGAACAGATCATaGCCACCAAGACTGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TGCAMHYSRGQHHRGYDMRWNRS*PPRLHC Trigger: ACAGTGCAGTCTTGGTGGTCATGATCTGTTCCACCT...CATGTCATAGCCTCTGTGATGCTGTCCTCTGGAATAGTGCATCGCACAGCCTGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| CDS-3UTR CCA 90 bp | ATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGGGCTCAGGTGTGCCTaGCCTGCCCCGCAGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IPGKNSELLTSFFSFKLIGLRCA*PAPQGP Trigger: AGGACCCTGCGGGGCAGGCCAGGCACACCTGAGCCC...AATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
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| CDS-3UTR CCA 90 bp | AATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCGGGCTCAGGTGTGCCTaGCCTGCCCCGCAGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NIPGKNSELLTSFFSFKLGLRCA*PAPQGP Trigger: AGGACCCTGCGGGGCAGGCCAGGCACACCTGAGCCC...GAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
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| CDS-3UTR GCA 90 bp | ATAAGTCTTATGAGAAGGCAAGGCTTAGAAGCTGGTATTGCTTCTGCCCATCTACTTCACGGAATCACCTaGCCAGCCTCCCTGTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISLMRRQGLEAGIASAHLLHGIT*PASLSA Trigger: TGCCGACAGGGAGGCTGGGCAGGTGATTCCGTGAAG...TAGATGGGCAGAAGCAATACCAGCTTCTAAGCCTTGCCTTCTCATAAGACTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| CDS-3UTR CCA 90 bp | CAAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGGGGCTCAGGTGTGCCTaGCCTGCCCCGCAGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QNIPGKNSELLTSFFSFKGLRCA*PAPQGP Trigger: AGGACCCTGCGGGGCAGGCCAGGCACACCTGAGCCC...CTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
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| CDS-3UTR CCA 90 bp | AACCTAATTAGGCCACTGGGTGTGCCGTGTGTGGTTGCACAGGCTGTGCGATGCGGATTAACCAAACCTTaGATTCAGCAGGCATCAATA | + |
|
Preference number: 4 (lower is better) Translates to: NLIRPLGVPCVVAQAVRCGLTKP*IQQASI Trigger: TATTGATGCCTGCTGAATCCAAGGTTTGGTTAATCC...GCATCGCACAGCCTGTGCAACCACACACGGCACACCCAGTGGCCTAATTAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| CDS-3UTR TCA 90 bp | ATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCTTCATGATTCTCGGCCTGCGCTaGCTCCTGTTGAGCTCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: IRSCLQASLALSSLHFFMILGLR*LLLSSA Trigger: CGCCGAGCTCAACAGGAGTCAGCGCAGGCCGAGAAT...CATGAAGAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
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| CDS-3UTR TCA 90 bp | CCGAGAAGTGAACAGCTTTCAGTAGGAGTGCCCACTCCTTCTCCGCCTGAATCGGTTCTCCTTCACTTGTaGTACATTTTCCAAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PRSEQLSVGVPTPSPPESVLLHL*YIFQEE Trigger: CTCTTCTTGGAAAATGTATCACAAGTGAAGGAGAAC...CGATTCAGGCGGAGAAGGAGTGGGCACTCCTACTGAAAGCTGTTCACTTCTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR GCA 90 bp | ACAGGCTGTGCGATGCACTATTCCAGAGGACAGCATCACAGAGGCTATGACATGCATGACCACCAAGACTaGACTGTTGACCAAGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: TGCAMHYSRGQHHRGYDMHDHQD*TVDQDQ Trigger: TTGATCTTGGTCAACAGTGCAGTCTTGGTGGTCATG...CATGTCATAGCCTCTGTGATGCTGTCCTCTGGAATAGTGCATCGCACAGCCTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| CDS-3UTR TCA 90 bp | ATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTATTCTCGGCCTGCGCTaGCTCCTGTTGAGCTCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: IPGKNSELLTSFFSFKLIILGLR*LLLSSA Trigger: CGCCGAGCTCAACAGGAGTCAGCGCAGGCCGAGAAT...AATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
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| CDS-3UTR TCA 90 bp | CACATGCTCCGCAACAAGGCCGCGAGTTCTGAGTTCCTATCAGCTGGTTTAAAACAGTGTCTGAATGGCTaGGTACTTCATGAGGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: HMLRNKAASSEFLSAGLKQCLNG*VLHEVI Trigger: AATGACCTCATGAAGTACTCAGCCATTCAGACACTG...TTTTAAACCAGCTGATAGGAACTCAGAACTCGCGGCCTTGTTGCGGAGCATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542766.5 |
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| CDS-3UTR TCA 90 bp | ATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCTTCATGGTGGGTCCCACTCAGTaGGGACCTCTGAGGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: IRSCLQASLALSSLHFFMVGPTQ*GPLRTP Trigger: AGGTGTCCTCAGAGGTCCTCACTGAGTGGGACCCAC...CATGAAGAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
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| CDS-3UTR TCA 90 bp | ATAAGTCTTATGAGAAGGCAAGGCTTAGAAGCTGGTATTGCTTCTGCCCATCTAACAGAGGCTATGACATaGATGCAGCTTCCGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISLMRRQGLEAGIASAHLTEAMT*MQLPPL Trigger: CAGGGGCGGAAGCTGCATTCATGTCATAGCCTCTGT...TAGATGGGCAGAAGCAATACCAGCTTCTAAGCCTTGCCTTCTCATAAGACTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| CDS-3UTR TCA 90 bp | GTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCATCTCCGCGGCCGCCTaGCGTCACTTCCTGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: VKIRSCLQASLALSSLHFISAAA*RHFLET Trigger: GGTTTCCAGGAAGTGACGTCAGGCGGCCGCGGAGAT...GAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000679083.1 |
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| CDS-3UTR GCA 90 bp | ATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCTTCATGCTTCACGGAATCACCTaGCCAGCCTCCCTGTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IRSCLQASLALSSLHFFMLHGIT*PASLSA Trigger: TGCCGACAGGGAGGCTGGGCAGGTGATTCCGTGAAG...CATGAAGAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
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| CDS-3UTR GCA 90 bp | AAGGCAAGGCTTAGAAGCTGGTATTGCTTCTGCCCATCTATATCAATAATGCAGGGACATGGGCATCAATaGCAGGGTCCAGACCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KARLRSWYCFCPSISIMQGHGHQ*QGPDLQ Trigger: CTGAAGGTCTGGACCCTGGCATTGATGCCCATGTCC...CTGCATTATTGATATAGATGGGCAGAAGCAATACCAGCTTCTAAGCCTTGCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| CDS-3UTR CCA 90 bp | ATAAGTCTTATGAGAAGGCAAGGCTTAGAAGCTGGTATTGCTTCTGCCCATCTACTGGGAGTAGGAAACTaGGTGGCCCTACCTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ISLMRRQGLEAGIASAHLLGVGN*VALPSQ Trigger: CTGTGAAGGTAGGGCCACCCAGTTTCCTACTCCCAG...TAGATGGGCAGAAGCAATACCAGCTTCTAAGCCTTGCCTTCTCATAAGACTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
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| CDS-3UTR TCA 90 bp | ATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTTGCGCTGACTCCTGTTaGGCTCGGCGACCCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IPGKNSELLTSFFSFKLICADSC*ARRPIL Trigger: CAAGATGGGTCGCCGAGCTCAACAGGAGTCAGCGCA...AATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
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| CDS-3UTR TCA 90 bp | GTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCTGCGCTGACTCCTGTTaGGCTCGGCGACCCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKIRSCLQASLALSSLHFCADSC*ARRPIL Trigger: CAAGATGGGTCGCCGAGCTCAACAGGAGTCAGCGCA...GAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
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| CDS-3UTR TCA 90 bp | AATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCGTGGGTCCCACTCAGTaGGGACCTCTGAGGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: NIPGKNSELLTSFFSFKLVGPTQ*GPLRTP Trigger: AGGTGTCCTCAGAGGTCCTCACTGAGTGGGACCCAC...GAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
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| CDS-3UTR TCA 90 bp | GTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCTGTCTAGAGCATGGGTaGCGGGCTCAGGTGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VKIRSCLQASLALSSLHFCLEHG*RAQVCL Trigger: CAGGCACACCTGAGCCCGTCACCCATGCTCTAGACA...GAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
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| CDS-3UTR GCA 90 bp | AAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCCTCCCGGACTTCGTaGTCCGGCGCGAGCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KIFQVKIRSCLQASLALSSSRTS*SGASTL Trigger: CAAAGTGCTCGCGCCGGAGCACGAAGTCCGGGAGGA...GCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
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| CDS-3UTR GCA 90 bp | CAAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGTCCTCCCGGACTTCGTaGTCCGGCGCGAGCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QNIPGKNSELLTSFFSFKSSRTS*SGASTL Trigger: CAAAGTGCTCGCGCCGGAGCACGAAGTCCGGGAGGA...CTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR GCA 90 bp | TGGGCATCAATGCCAGGGTCCAGACCTTCAGTTGAGGAAGCGGGATTAACCAAACTTAGAAGCTGGTATTaGTTCTGCCCATCTATATCA | + |
|
Preference number: 4 (lower is better) Translates to: WASMPGSRPSVEEAGLTKLRSWY*FCPSIS Trigger: TGATATAGATGGGCAGAAGCAATACCAGCTTCTAAG...TTTGGTTAATCCCGCTTCCTCAACTGAAGGTCTGGACCCTGGCATTGATGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
||
| CDS-3UTR CCA 90 bp | ATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCTTCATGGCTTTATCTGGATGCTaGGAGGGGCTGCCACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IRSCLQASLALSSLHFFMALSGC*EGLPPA Trigger: TGCAGGTGGCAGCCCCTCCCAGCATCCAGATAAAGC...CATGAAGAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR CCA 90 bp | CAAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCGGCGACCCATCTTaGCCCTCGGGAAGAAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QNIPGKNSELLTSFFSFKLGDPS*PSGRKA Trigger: GGCCTTTCTTCCCGAGGGCCAAGATGGGTCGCCGAG...CTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000679083.1 |
||
| 3UTR CAA 72 bp | CGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATaGCATTTCTTCATGTCTAGAGCATGGGTGACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSCLQASLALSS*HFFMSRAWVTG Trigger: GCCCGTCACCCATGCTCTAGACATGAAGAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR TCA 90 bp | AAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTGCGCTGACTCCTGTTaGGCTCGGCGACCCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KIFQVKIRSCLQASLALSCADSC*ARRPIL Trigger: CAAGATGGGTCGCCGAGCTCAACAGGAGTCAGCGCA...GCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR TCA 90 bp | ATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCTTCATGCTCAGTGAGGACCTCTaGGGACACCTCAGTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: IRSCLQASLALSSLHFFMLSEDL*GHLSEQ Trigger: CTGTTCACTGAGGTGTCCTCAGAGGTCCTCACTGAG...CATGAAGAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR TCA 90 bp | CAAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGGTGGGTCCCACTCAGTaGGGACCTCTGAGGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: QNIPGKNSELLTSFFSFKVGPTQ*GPLRTP Trigger: AGGTGTCCTCAGAGGTCCTCACTGAGTGGGACCCAC...CTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR TCA 90 bp | CAAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGTGTCTAGAGCATGGGTaGCGGGCTCAGGTGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QNIPGKNSELLTSFFSFKCLEHG*RAQVCL Trigger: CAGGCACACCTGAGCCCGTCACCCATGCTCTAGACA...CTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR CCA 90 bp | ATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCTTCATGACCTCAGTGAACAGATaGTCCCAGTCCCAGCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: IRSCLQASLALSSLHFFMTSVNR*SQSQPT Trigger: TGTCGGCTGGGACTGGGACCATCTGTTCACTGAGGT...CATGAAGAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR CCA 90 bp | ATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTCTTCTCCGTCTGCAGTaGGTCCCACTCAGTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IPGKNSELLTSFFSFKLILLRLQ*VPLSED Trigger: GTCCTCACTGAGTGGGACCCACTGCAGACGGAGAAG...AATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR CCA 90 bp | GAAGGCATGGGCCAGTACCCTGATACCTGGACATATAATTCTAAAACCACACAGTCTAAAACCACACAGTaGGAGATAGGACATGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGMGQYPDTWTYNSKTTQSKTTQ*EIGHGH Trigger: ATGCCCATGTCCTATCTCCCACTGTGTGGTTTTAGA...CTGTGTGGTTTTAGAATTATATGTCCAGGTATCAGGGTACTGGCCCATGCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556742.1 |
||
| CDS-3UTR TCA 90 bp | GTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCTTCTTGCCATTGAGGTaGTTCTCGGCCTGCGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VKIRSCLQASLALSSLHFFLPLR*FSACAD Trigger: GTCAGCGCAGGCCGAGAATCACCTCAATGGCAAGAA...GAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR TCA 90 bp | ATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTTTCTTGCCATTGAGGTaGTTCTCGGCCTGCGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IPGKNSELLTSFFSFKLIFLPLR*FSACAD Trigger: GTCAGCGCAGGCCGAGAATCACCTCAATGGCAAGAA...AATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR TCA 90 bp | ATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCTTCATGAGGAATTCTTGCCATTaGGGTGATTCTCGGCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: IRSCLQASLALSSLHFFMRNSCH*GDSRPA Trigger: CGCAGGCCGAGAATCACCTCAATGGCAAGAATTCCT...CATGAAGAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR TCA 90 bp | AATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCGCGCGAGCACTTTGGTaGGGAGTTTCAGGTCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: NIPGKNSELLTSFFSFKLARALW*GVSGRS Trigger: AGATCGACCTGAAACTCCTCACCAAAGTGCTCGCGC...GAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR TCA 90 bp | ATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTCTCAGTGAGGACCTCTaGGGACACCTCAGTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: IPGKNSELLTSFFSFKLILSEDL*GHLSEQ Trigger: CTGTTCACTGAGGTGTCCTCAGAGGTCCTCACTGAG...AATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR GCA 90 bp | ATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCTTCATGGGAGGGGCTGCCACCTaGAAAACAAAGTCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IRSCLQASLALSSLHFFMGGAAT*KTKSSS Trigger: GGAAGAAGACTTTGTTTTGCAGGTGGCAGCCCCTCC...CATGAAGAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR GCA 90 bp | GTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCGATGCTGGGAGGGGCTaGCACCTGCAAAACAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VKIRSCLQASLALSSLHFDAGRG*HLQNKV Trigger: GACTTTGTTTTGCAGGTGGCAGCCCCTCCCAGCATC...GAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR GCA 90 bp | AAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCCTCCTTCTCCGTCTaGAGTGGGTCCCACTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KIFQVKIRSCLQASLALSSSFSV*SGSHSV Trigger: CACTGAGTGGGACCCACTGCAGACGGAGAAGGAGGA...GCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR GCA 90 bp | GTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCAAGGCCGTCCCTGCCTaGCTCCCTTCCATGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: VKIRSCLQASLALSSLHFKAVPA*LPSMHK Trigger: TTTATGCATGGAAGGGAGGCAGGCAGGGACGGCCTT...GAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000679083.1 |
||
| CDS-3UTR CCA 90 bp | CAAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGGCTTTATCTGGATGCTaGGAGGGGCTGCCACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QNIPGKNSELLTSFFSFKALSGC*EGLPPA Trigger: TGCAGGTGGCAGCCCCTCCCAGCATCCAGATAAAGC...CTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR CCA 90 bp | AAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCATCACCCGCTTTATCTaGATGCTGGGAGGGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KIFQVKIRSCLQASLALSITRFI*MLGGAA Trigger: GGCAGCCCCTCCCAGCATCCAGATAAAGCGGGTGAT...GCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR CCA 90 bp | GTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCACCTCAGTGAACAGATaGTCCCAGTCCCAGCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: VKIRSCLQASLALSSLHFTSVNR*SQSQPT Trigger: TGTCGGCTGGGACTGGGACCATCTGTTCACTGAGGT...GAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR CCA 90 bp | CAAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTTCTCCGTCTGCAGTaGGTCCCACTCAGTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QNIPGKNSELLTSFFSFKLLRLQ*VPLSED Trigger: GTCCTCACTGAGTGGGACCCACTGCAGACGGAGAAG...CTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR CCA 90 bp | CAAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGGGAAAAACTCTAGGATaGGAGCGAGTGCGACCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QNIPGKNSELLTSFFSFKGKTLG*ERVRPR Trigger: CCGGGGTCGCACTCGCTCCCATCCTAGAGTTTTTCC...CTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000679083.1 |
||
| CDS-3UTR TCA 90 bp | ATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCTTCATGATCTGCCTCTTCCAATaGAGCCAGCCCCAAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IRSCLQASLALSSLHFFMICLFQ*SQPQIS Trigger: AGAGATTTGGGGCTGGCTTCATTGGAAGAGGCAGAT...CATGAAGAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238628.10 |
||
| CDS-3UTR TCA 90 bp | ATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCTTCATGTCCCCATCCAGTGTCTaGATGGCTGAGTACTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: IRSCLQASLALSSLHFFMSPSSV*MAEYFM Trigger: CATGAAGTACTCAGCCATTCAGACACTGGATGGGGA...CATGAAGAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR TCA 90 bp | CAAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGGCGCGAGCACTTTGGTaGGGAGTTTCAGGTCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QNIPGKNSELLTSFFSFKARALW*GVSGRS Trigger: AGATCGACCTGAAACTCCTCACCAAAGTGCTCGCGC...CTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR TCA 90 bp | AAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCCTCAGTGAGGACCTCTaGGGACACCTCAGTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: KIFQVKIRSCLQASLALSLSEDL*GHLSEQ Trigger: CTGTTCACTGAGGTGTCCTCAGAGGTCCTCACTGAG...GCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR TCA 90 bp | GTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCTCCCCTATCACCCTGTaGTCGATCTGTTCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VKIRSCLQASLALSSLHFSPITL*SICSGE Trigger: TTCCCCAGAACAGATCGATCACAGGGTGATAGGGGA...GAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000679083.1 |
||
| CDS-3UTR GCA 90 bp | ATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCTTCATGGATCCAGCTGTTGTTTaGCTGTTTGGGTACCGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: IRSCLQASLALSSLHFFMDPAVV*LFGYRS Trigger: CGAACGGTACCCAAACAGGCAAACAACAGCTGGATC...CATGAAGAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238628.10 |
||
| CDS-3UTR GCA 90 bp | AAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCGATGCTGGGAGGGGCTaGCACCTGCAAAACAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KIFQVKIRSCLQASLALSDAGRG*HLQNKV Trigger: GACTTTGTTTTGCAGGTGGCAGCCCCTCCCAGCATC...GCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR CCA 90 bp | AAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCACCTCAGTGAACAGATaGTCCCAGTCCCAGCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: KIFQVKIRSCLQASLALSTSVNR*SQSQPT Trigger: TGTCGGCTGGGACTGGGACCATCTGTTCACTGAGGT...GCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR CCA 90 bp | AATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCTTCATGTCTAGAGCATaGGTGACGGGCTCAGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NIPGKNSELLTSFFSFKLFMSRA*VTGSGV Trigger: CACACCTGAGCCCGTCACCCATGCTCTAGACATGAA...GAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR CCA 90 bp | GTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCTTCATGTCTAGAGCATaGGTGACGGGCTCAGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VKIRSCLQASLALSSLHFFMSRA*VTGSGV Trigger: CACACCTGAGCCCGTCACCCATGCTCTAGACATGAA...GAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR CCA 90 bp | AAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCGTGATCGATCTGTTCTaGGGAAGTTCGCACTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KIFQVKIRSCLQASLALSVIDLF*GSSHSG Trigger: CCCCGAGTGCGAACTTCCCCAGAACAGATCGATCAC...GCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000679083.1 |
||
| 3UTR CAA 72 bp | TTCCAAGAAGAGAAAGCTTCTTTAGCTTTAAGCTCATaGCATTTCTTCATGTCTAGAGCATGGGTGACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FQEEKASLALSS*HFFMSRAWVTG Trigger: GCCCGTCACCCATGCTCTAGACATGAAGAAATGCAATGAGCTTAAAGCTAAAGAAGCTTTCTCTTCTTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
||
| CDS-3UTR TCA 90 bp | CAAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGAGGAATTCTTGCCATTaGGGTGATTCTCGGCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QNIPGKNSELLTSFFSFKRNSCH*GDSRPA Trigger: CGCAGGCCGAGAATCACCTCAATGGCAAGAATTCCT...CTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR TCA 90 bp | GTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCTCCCCATCCAGTGTCTaGATGGCTGAGTACTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: VKIRSCLQASLALSSLHFSPSSV*MAEYFM Trigger: CATGAAGTACTCAGCCATTCAGACACTGGATGGGGA...GAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR GCA 90 bp | ATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTTTTTGCAGGAACTTCTaGGACGAGGTGTCCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IPGKNSELLTSFFSFKLIFCRNF*DEVSQR Trigger: CCTTTGGGACACCTCGTCGCAGAAGTTCCTGCAAAA...AATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAAT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000679083.1 |
||
| CDS-3UTR GCA 90 bp | GTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCAAACAGTGCGGCTTTTaGAGGAACTTCTGCGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: VKIRSCLQASLALSSLHFKQCGF*RNFCDE Trigger: CTCGTCGCAGAAGTTCCTGCAAAAGCCGCACTGTTT...GAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000679083.1 |
||
| CDS-3UTR GCA 90 bp | AAGCTGGTATTGCTTCTGCCCATCTATATCAATAATGCAGAAGGCATGGGCCAGAGCTGGTATTGCTTCTaGCCATCTATATCAATAATG | + |
|
Preference number: 4 (lower is better) Translates to: KLVLLLPIYINNAEGMGQSWYCF*PSISIM Trigger: CATTATTGATATAGATGGGCAGAAGCAATACCAGCT...CTGGCCCATGCCTTCTGCATTATTGATATAGATGGGCAGAAGCAATACCAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
||
| CDS-3UTR CCA 90 bp | ATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCTTCATGTGTTGTTTGCCTGTTTaGGTACCGTTCGAAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IRSCLQASLALSSLHFFMCCLPV*VPFEAF Trigger: GAAGGCTTCGAACGGTACCCAAACAGGCAAACAACA...CATGAAGAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238628.10 |
||
| CDS-3UTR CCA 90 bp | CAAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGTTCATGTCTAGAGCATaGGTGACGGGCTCAGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QNIPGKNSELLTSFFSFKFMSRA*VTGSGV Trigger: CACACCTGAGCCCGTCACCCATGCTCTAGACATGAA...CTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR CCA 90 bp | ATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTTCCATTCAGGCTCTGTaGTCTGAGGCGGAAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IPGKNSELLTSFFSFKLISIQAL*SEAEIF Trigger: GAAGATTTCCGCCTCAGACCACAGAGCCTGAATGGA...AATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR TCA 90 bp | AATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCTCAGGCTCTGTGGTCTaGGGCGGAAATCTTCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: NIPGKNSELLTSFFSFKLSGSVV*GGNLLF Trigger: AAATAGAAGATTTCCGCCTCAGACCACAGAGCCTGA...GAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR TCA 90 bp | ATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTTCAGGCTCTGTGGTCTaGGGCGGAAATCTTCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: IPGKNSELLTSFFSFKLISGSVV*GGNLLF Trigger: AAATAGAAGATTTCCGCCTCAGACCACAGAGCCTGA...AATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR TCA 90 bp | ATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTATCTCCTCCATAATCTaGTCCATTCAGGCTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IPGKNSELLTSFFSFKLIISSII*SIQALW Trigger: CCACAGAGCCTGAATGGATCAGATTATGGAGGAGAT...AATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR GCA 90 bp | CAAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCCTGCCTCCCTTCCATaGATAAAACAGTGCGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QNIPGKNSELLTSFFSFKPASLP*IKQCGF Trigger: AAAGCCGCACTGTTTTATGCATGGAAGGGAGGCAGG...CTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000679083.1 |
||
| CDS-3UTR CCA 90 bp | CAAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGTCCATTCAGGCTCTGTaGTCTGAGGCGGAAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QNIPGKNSELLTSFFSFKSIQAL*SEAEIF Trigger: GAAGATTTCCGCCTCAGACCACAGAGCCTGAATGGA...CTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR TCA 90 bp | ATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTCAGTGTCTGAATGGCTaGGTACTTCATGAGGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: IPGKNSELLTSFFSFKLIQCLNG*VLHEVI Trigger: AATGACCTCATGAAGTACTCAGCCATTCAGACACTG...AATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR TCA 90 bp | GTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCCAGTGTCTGAATGGCTaGGTACTTCATGAGGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: VKIRSCLQASLALSSLHFQCLNG*VLHEVI Trigger: AATGACCTCATGAAGTACTCAGCCATTCAGACACTG...GAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR TCA 90 bp | CAAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGATCTCCTCCATAATCTaGTCCATTCAGGCTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QNIPGKNSELLTSFFSFKISSII*SIQALW Trigger: CCACAGAGCCTGAATGGATCAGATTATGGAGGAGAT...CTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR GCA 90 bp | GTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCGTAAAAATTCGGAGCTaGTTACAAGCTTCTTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VKIRSCLQASLALSSLHFVKIRS*LQASLA Trigger: AGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTAC...GAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR GCA 90 bp | ATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGTAAAAATTCGGAGCTaGTTACAAGCTTCTTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPGKNSELLTSFFSFKLIVKIRS*LQASLA Trigger: AGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTAC...AATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR GCA 90 bp | AAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCGTAAAAATTCGGAGCTaGTTACAAGCTTCTTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KIFQVKIRSCLQASLALSVKIRS*LQASLA Trigger: AGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTAC...GCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS TCA 90 bp | GCCTCCTTCTGGGCCTCACCCGGCGCGGCGCGAGGCCTGCCGCCCTaGGTCGCCTCAGAGAAGTCGGGGCCGGCGGGGTCGCTCCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASFWASPGAARGLPP*VASEKSGPAGSLLP Trigger: GGGGAGGAGCGACCCCGCCGGCCCCGACTTCTCTGAGGCGACTCAGGGCGGCAGGCCTCGCGCCGCGCCGGGTGAGGCCCAGAAGGAGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553338.1 |
||
| CDS GCA 90 bp | CACTCAGCGCTCCCTATGGCCGGGGAGTGGGCCTTAGTTAGCTGCTaGCAGCCTAACCCAAAGCCGCATCCAAGAGAAGCAGGCAGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: HSALPMAGEWALVSC*QPNPKPHPREAGSE Trigger: TTCGCTGCCTGCTTCTCTTGGATGCGGCTTTGGGTTAGGCTGGCAGCAGCTAACTAAGGCCCACTCCCCGGCCATAGGGAGCGCTGAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555305.5 |
||
| CDS GCA 90 bp | AAGCACTCAGCGCTCCCTATGGCCGGGGAGTGGGCCTTAGTTAGCTaGTGCCAGCCTAACCCAAAGCCGCATCCAAGAGAAGCAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KHSALPMAGEWALVS*CQPNPKPHPREAGS Trigger: GCTGCCTGCTTCTCTTGGATGCGGCTTTGGGTTAGGCTGGCAGCAGCTAACTAAGGCCCACTCCCCGGCCATAGGGAGCGCTGAGTGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555305.5 |
||
| CDS CCA 90 bp | GGGTCCCACTCAGTGAGGACCTCTGAGGACACCTCAGTGAACAGATaGTCCCAGTCCCAGCCGACATCATCCTCCCGGACTTCGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSHSVRTSEDTSVNR*SQSQPTSSSRTSCS Trigger: GGAGCACGAAGTCCGGGAGGATGATGTCGGCTGGGACTGGGACCATCTGTTCACTGAGGTGTCCTCAGAGGTCCTCACTGAGTGGGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000542766.5 ENST00000554026.5 ENST00000555305.5 ENST00000679083.1 |
||
| CDS TCA 90 bp | GTCCTCCTTCTCCGTCTGCAGTGGGTCCCACTCAGTGAGGACCTCTaGGGACACCTCAGTGAACAGATGGTCCCAGTCCCAGCCGACATC | + |
|
Preference number: 5 (lower is better) Translates to: VLLLRLQWVPLSEDL*GHLSEQMVPVPADI Trigger: GATGTCGGCTGGGACTGGGACCATCTGTTCACTGAGGTGTCCTCAGAGGTCCTCACTGAGTGGGACCCACTGCAGACGGAGAAGGAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000542766.5 ENST00000554026.5 ENST00000555305.5 ENST00000679083.1 |
||
| CDS-3UTR CAA 90 bp | GTGCCCACTCCTTCTCCGCCTGAATCGAACTCTCCCACATGCTCCGCAACAAGGTCCGGCGCGAGCACTTaGGTGAGGAGTTTCAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VPTPSPPESNSPTCSATRSGAST*VRSFRS Trigger: CGACCTGAAACTCCTCACCAAAGTGCTCGCGCCGGA...CCTTGTTGCGGAGCATGTGGGAGAGTTCGATTCAGGCGGAGAAGGAGTGGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542766.5 |
||
| CDS TCA 90 bp | CGACATCATCCTCCCGGACTTCGTGCTCCGGCGCGAGCACTTTGGTaGGGAGTTTCAGGTCGATCTCCCCATCCAGTGTCTGAATGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RHHPPGLRAPARALW*GVSGRSPHPVSEWL Trigger: CAGCCATTCAGACACTGGATGGGGAGATCGACCTGAAACTCCTCACCAAAGTGCTCGCGCCGGAGCACGAAGTCCGGGAGGATGATGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000542766.5 ENST00000554026.5 ENST00000555305.5 ENST00000679083.1 |
||
| CDS-3UTR CAA 90 bp | GCACAGGCTGTGCGATGCACTATTCCAGAGGACAGCATCACAGAGGCTATGACAGCTCGGCGACCCATCTaGGCCCTGGAGGTAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: AQAVRCTIPEDSITEAMTARRPI*ALEVAK Trigger: CTTGGCTACCTCCAGGGCCAAGATGGGTCGCCGAGC...TGTCATAGCCTCTGTGATGCTGTCCTCTGGAATAGTGCATCGCACAGCCTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556742.1 |
||
| CDS TCA 90 bp | CATTGTCCAGGTCACGGTAGGTCATCACCCGCTTTATCTGGATGCTaGAGGAAAGAGAGAGCGAGAGGCGGGAACCCCAGGCAGGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: HCPGHGRSSPALSGC*RKERARGGNPRQDL Trigger: CAGGTCCTGCCTGGGGTTCCCGCCTCTCGCTCTCTCTTTCCTTCAGCATCCAGATAAAGCGGGTGATGACCTACCGTGACCTGGACAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554026.5 ENST00000555305.5 |
||
| CDS TCA 90 bp | AGTCAAAGAGGAATTCTTGCCATTGAGGTGATTCTCGGCCTGCGCTaGCTCCTGTTGAGCTCGGCGACCCATCTTGGCCCTGGAGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQRGILAIEVILGLR*LLLSSATHLGPGGS Trigger: GCTACCTCCAGGGCCAAGATGGGTCGCCGAGCTCAACAGGAGTCAGCGCAGGCCGAGAATCACCTCAATGGCAAGAATTCCTCTTTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000542766.5 ENST00000554026.5 ENST00000555305.5 ENST00000556742.1 |
||
| CDS TCA 90 bp | AGTCAAAGAGGAATTCTTGCCATTGAGGTGATTCTCGGCCTGCGCTaGCTCCTGTTGAGCTCGGCGACCCATCTTGGCCCTCTCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQRGILAIEVILGLR*LLLSSATHLGPLPS Trigger: GGAAGGGAGAGGGCCAAGATGGGTCGCCGAGCTCAACAGGAGTCAGCGCAGGCCGAGAATCACCTCAATGGCAAGAATTCCTCTTTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555370.5 |
||
| CDS TCA 90 bp | AGTCAAAGAGGAATTCTTGCCATTGAGGTGATTCTCGGCCTGCGCTaGCTCCTGTTGAGCTCGGCGACCCATCTTGGCCCTCGGGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SQRGILAIEVILGLR*LLLSSATHLGPREE Trigger: TTCTTCCCGAGGGCCAAGATGGGTCGCCGAGCTCAACAGGAGTCAGCGCAGGCCGAGAATCACCTCAATGGCAAGAATTCCTCTTTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553338.1 ENST00000679083.1 |
||
| CDS CCA 90 bp | GCTTCTTTAGCTTTAAGCTCATTGCATTTCTTCATGTCTAGAGCATaGGTGACGGGCTCAGGTGTGCCTGGCCTGCCCCGCAGGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASLALSSLHFFMSRA*VTGSGVPGLPRRVL Trigger: GAGGACCCTGCGGGGCAGGCCAGGCACACCTGAGCCCGTCACCCATGCTCTAGACATGAAGAAATGCAATGAGCTTAAAGCTAAAGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000542766.5 ENST00000554026.5 ENST00000555305.5 ENST00000679083.1 |
||
| CDS CCA 90 bp | GGCTCTGTAAGAGAGGGCTTCCATGGAATTCTCAGGGCTGCTGGCTaGCCCCTTCCCATGAGAATCAGAAATGAGGCTCTGGGAACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSVREGFHGILRAAG*PLPMRIRNEALGTC Trigger: ACAGGTTCCCAGAGCCTCATTTCTGATTCTCATGGGAAGGGGCCAGCCAGCAGCCCTGAGAATTCCATGGAAGCCCTCTCTTACAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555305.5 |
||
| CDS TCA 90 bp | CAGAGGAAGTCTCTCCAGTCAGAGTCAAAGAGGAATTCTTGCCATTaGGGTGATTCTCGGCCTGCGCTGACTCCTGTTGAGCTCGGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: QRKSLQSESKRNSCH*GDSRPALTPVELGD Trigger: GTCGCCGAGCTCAACAGGAGTCAGCGCAGGCCGAGAATCACCTCAATGGCAAGAATTCCTCTTTGACTCTGACTGGAGAGACTTCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000542766.5 ENST00000553338.1 ENST00000554026.5 ENST00000555305.5 ENST00000555370.5 ENST00000555677.5 ENST00000556742.1 ENST00000679083.1 |
||
| CDS-3UTR CAA 90 bp | AACAAGGCCGCGAGTTCTGAGTTCCTATCAGCTGGTTTAAAAGCTGTTCTCCTTGCTCGGCGACCCATCTaGGCCCTGGAGGTAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: NKAASSEFLSAGLKAVLLARRPI*ALEVAK Trigger: CTTGGCTACCTCCAGGGCCAAGATGGGTCGCCGAGC...AAGGAGAACAGCTTTTAAACCAGCTGATAGGAACTCAGAACTCGCGGCCTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542766.5 |
||
| CDS TCA 90 bp | AGGGCTTCCATGGAATTCTCAGGGCTGCTGGCTGGCCCCTTCCCATaGGAATCAGAAATGAGGCTCTGGGAACCTGTAGAAGCTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RASMEFSGLLAGPFP*ESEMRLWEPVEAFG Trigger: TCCAAAAGCTTCTACAGGTTCCCAGAGCCTCATTTCTGATTCTCATGGGAAGGGGCCAGCCAGCAGCCCTGAGAATTCCATGGAAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555305.5 |
||
| CDS TCA 90 bp | TCAGGTCGATCTCCCCATCCAGTGTCTGAATGGCTGAGTACTTCATaGGGTCATTGTCCAGGTCACGGTAGGTCATCACCCGCTTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: SGRSPHPVSEWLSTS*GHCPGHGRSSPALS Trigger: AGATAAAGCGGGTGATGACCTACCGTGACCTGGACAATGACCTCATGAAGTACTCAGCCATTCAGACACTGGATGGGGAGATCGACCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000542766.5 ENST00000554026.5 ENST00000555305.5 ENST00000679083.1 |
||
| CDS GCA 90 bp | ATCTTGGAACCAGGCGGTTATAATACTTGCAGCGGTGGAGATGGCTaGAACGTATCTAAAAGGATAAGGAGAAGGGAGGCCCAGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ILEPGGYNTCSGGDG*NVSKRIRRREAQAL Trigger: CAGAGCCTGGGCCTCCCTTCTCCTTATCCTTTTAGATACGTTGCAGCCATCTCCACCGCTGCAAGTATTATAACCGCCTGGTTCCAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555305.5 |
||
| CDS TCA 90 bp | AAGGGAGAGATACTCCAGGTAGAGGTGGCAGCATTCAGCAAGGCATaGAGATGTGCATCAGCATGCGTCAGAAGACCACTGCAAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KGEILQVEVAAFSKA*RCASACVRRPLQMS Trigger: AGACATTTGCAGTGGTCTTCTGACGCATGCTGATGCACATCTTCATGCCTTGCTGAATGCTGCCACCTCTACCTGGAGTATCTCTCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554233.1 |
||
| CDS CCA 90 bp | CCCATGAGAATCAGAAATGAGGCTCTGGGAACCTGTAGAAGCTTTTaGAGCTCAAGGCATGGACTGCAGGAAGAGGGGAGAAAGGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PMRIRNEALGTCRSF*SSRHGLQEEGRKEN Trigger: ATTCTCCTTTCTCCCCTCTTCCTGCAGTCCATGCCTTGAGCTCCAAAAGCTTCTACAGGTTCCCAGAGCCTCATTTCTGATTCTCATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555305.5 |
||
| CDS-3UTR CAA 90 bp | GTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCGCTCGGCGACCCATCTaGGCCCTGGAGGTAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VKIRSCLQASLALSSLHFARRPI*ALEVAK Trigger: CTTGGCTACCTCCAGGGCCAAGATGGGTCGCCGAGC...GAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000238628.10 ENST00000314067.11 |
||
| CDS-3UTR CAA 90 bp | ACAGGCTGTGCGATGCACTATTCCAGAGGACAGCATCACAGAGGCTATGACATGGGGATTAACCAAACCTaGGATTCAGCAGGCATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: TGCAMHYSRGQHHRGYDMGINQT*DSAGIN Trigger: ATTGATGCCTGCTGAATCCAAGGTTTGGTTAATCCC...CATGTCATAGCCTCTGTGATGCTGTCCTCTGGAATAGTGCATCGCACAGCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556742.1 |
||
| CDS TCA 90 bp | AAACAAAAGACAGCTCTGTTTAGGAGAAGGGTGGGACTCTGCTCCTaGTCTCAGCACATCTTGGAACCAGGCGGTTATAATACTTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KQKTALFRRRVGLCS*SQHILEPGGYNTCS Trigger: GCTGCAAGTATTATAACCGCCTGGTTCCAAGATGTGCTGAGATCAGGAGCAGAGTCCCACCCTTCTCCTAAACAGAGCTGTCTTTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555305.5 |
||
| CDS TCA 90 bp | AGACCTTTTGACTTCCTCCAAGGGCCTCTTACCTCCTCCATAATCTaGTCCATTCAGGCTCTGTGGTCTGAGGCGGAAATCTTCTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: RPFDFLQGPLTSSII*SIQALWSEAEIFYF Trigger: GAAATAGAAGATTTCCGCCTCAGACCACAGAGCCTGAATGGATCAGATTATGGAGGAGGTAAGAGGCCCTTGGAGGAAGTCAAAAGGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554233.1 |
||
| CDS CCA 90 bp | ATACAGCAGGGGATGACCAGAATGGGAATAACAAAATGGGAACCCTaGATGGAGCCCAACACCAGAAAGATCCAGATTGACATCAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: IQQGMTRMGITKWEP*MEPNTRKIQIDIKV Trigger: GACCTTGATGTCAATCTGGATCTTTCTGGTGTTGGGCTCCATCCAGGGTTCCCATTTTGTTATTCCCATTCTGGTCATCCCCTGCTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000553438.1 ENST00000554026.5 ENST00000555305.5 |
||
| CDS CCA 90 bp | GAACCTTGTATACAGCAGGGGATGACCAGAATGGGAATAACAAAATaGGAACCCTGGATGGAGCCCAACACCAGAAAGATCCAGATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: EPCIQQGMTRMGITK*EPWMEPNTRKIQID Trigger: GTCAATCTGGATCTTTCTGGTGTTGGGCTCCATCCAGGGTTCCCATTTTGTTATTCCCATTCTGGTCATCCCCTGCTGTATACAAGGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000553438.1 ENST00000554026.5 ENST00000555305.5 |
||
| CDS-3UTR CAA 90 bp | CAAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGGCTCGGCGACCCATCTaGGCCCTCGGGAAGAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QNIPGKNSELLTSFFSFKARRPI*ALGKKG Trigger: GCCTTTCTTCCCGAGGGCCAAGATGGGTCGCCGAGC...CTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000679083.1 |
||
| CDS-3UTR CAA 90 bp | AATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCTCCGGCGCGAGCACTTaGGTGAGGAGTTTCAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: NIPGKNSELLTSFFSFKLSGAST*VRSFRS Trigger: CGACCTGAAACTCCTCACCAAAGTGCTCGCGCCGGA...GAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR CAA 90 bp | ATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTTCCGGCGCGAGCACTTaGGTGAGGAGTTTCAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: IPGKNSELLTSFFSFKLISGAST*VRSFRS Trigger: CGACCTGAAACTCCTCACCAAAGTGCTCGCGCCGGA...AATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS-3UTR CAA 90 bp | AAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCCGGCGCGAGCACTTaGGTGAGGAGTTTCAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: KIFQVKIRSCLQASLALSSGAST*VRSFRS Trigger: CGACCTGAAACTCCTCACCAAAGTGCTCGCGCCGGA...GCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000679083.1 |
||
| CDS TCA 90 bp | CCCAACACCAGAAAGATCCAGATTGACATCAAGGTCCACTATAGATaGTATCTGGAGTGTATTAATTCACGTGTTCTTTGCCTCCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: PNTRKIQIDIKVHYR*YLECINSRVLCLPN Trigger: ATTGGGGAGGCAAAGAACACGTGAATTAATACACTCCAGATATCATCTATAGTGGACCTTGATGTCAATCTGGATCTTTCTGGTGTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000553438.1 ENST00000554026.5 ENST00000555305.5 |
||
| CDS GCA 90 bp | CTTGAGGAAGGTTTCAAAAGTGGAGGCAAATTAGTATATCTCAAGTaGTTTATTTGTCTGCAGTCCTCTTTAGAGACAAGCCCCACAACC | + |
|
Preference number: 5 (lower is better) Translates to: LEEGFKSGGKLVYLK*FICLQSSLETSPTT Trigger: GGTTGTGGGGCTTGTCTCTAAAGAGGACTGCAGACAAATAAAGCACTTGAGATATACTAATTTGCCTCCACTTTTGAAACCTTCCTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000554233.1 ENST00000554423.1 |
||
| CDS-3UTR CAA 90 bp | GTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATTGCATTTCCTGTTGTTTGCCTGTTaGGGTACCGTTCGAAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VKIRSCLQASLALSSLHFLLFAC*GTVRSL Trigger: AAGGCTTCGAACGGTACCCAAACAGGCAAACAACAG...GAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238628.10 |
||
| CDS-3UTR CAA 90 bp | AAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCAGATCCAGCTGTTGTTaGCCTGTTTGGGTACCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KIFQVKIRSCLQASLALSRSSCC*PVWVPF Trigger: GAACGGTACCCAAACAGGCAAACAACAGCTGGATCT...GCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238628.10 |
||
| CDS-3UTR CAA 90 bp | CAAAATATTCCAGGTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGAAAACAGTGCGGCTTTaGCAGGAACTTCTGCGACGA | + |
|
Preference number: 5 (lower is better) Translates to: QNIPGKNSELLTSFFSFKKTVRL*QELLRR Trigger: TCGTCGCAGAAGTTCCTGCAAAAGCCGCACTGTTTT...CTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTACCTGGAATATTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000679083.1 |
||
| CDS CCA 90 bp | CCAGAAAGATCCAGATTGACATCAAGGTCCACTATAGATGATATCTaGAGTGTATTAATTCACGTGTTCTTTGCCTCCCCAATCATATCT | + |
|
Preference number: 5 (lower is better) Translates to: PERSRLTSRSTIDDI*SVLIHVFFASPIIS Trigger: AGATATGATTGGGGAGGCAAAGAACACGTGAATTAATACACTCCAGATATCATCTATAGTGGACCTTGATGTCAATCTGGATCTTTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000553438.1 ENST00000554026.5 ENST00000555305.5 |
||
| CDS-3UTR CAA 90 bp | TTTCTCCTAGATGAAAATGTCCCTGAACCTGTTTTTCTCTGTCAACTTAGTCAAACCAAGACTGCACTGTaGACCAAGATCAACATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FLLDENVPEPVFLCQLSQTKTAL*TKINIG Trigger: TCCTATGTTGATCTTGGTCAACAGTGCAGTCTTGGT...TTGACTAAGTTGACAGAGAAAAACAGGTTCAGGGACATTTTCATCTAGGAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556742.1 |
||
| CDS TCA 72 bp | TGGGCCTCACCCGGCGCGGCGCGAGGCCTGCCGCCCTaGGTCGCCTCAGAGAAGTCGGGGCCGGCGGGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: WASPGAARGLPP*VASEKSGPAGS Trigger: CGACCCCGCCGGCCCCGACTTCTCTGAGGCGACTCAGGGCGGCAGGCCTCGCGCCGCGCCGGGTGAGGCCCA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553338.1 |
||
| CDS GCA 72 bp | GGCGGGAACCCCAGGCAGGACCTGTTCCAGGAGTGCTaGCGGGCCACCGTCCCCAGAACCTTGTATACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GGNPRQDLFQEC*RATVPRTLYTA Trigger: TGCTGTATACAAGGTTCTGGGGACGGTGGCCCGGCAGCACTCCTGGAACAGGTCCTGCCTGGGGTTCCCGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000553438.1 ENST00000554026.5 ENST00000555305.5 |
||
| CDS TCA 72 bp | CCTCCCGGACTTCGTGCTCCGGCGCGAGCACTTTGGTaGGGAGTTTCAGGTCGATCTCCCCATCCAGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PPGLRAPARALW*GVSGRSPHPVS Trigger: AGACACTGGATGGGGAGATCGACCTGAAACTCCTCACCAAAGTGCTCGCGCCGGAGCACGAAGTCCGGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000542766.5 ENST00000554026.5 ENST00000555305.5 ENST00000679083.1 |
||
| CDS GCA 72 bp | GCGCTCCCTATGGCCGGGGAGTGGGCCTTAGTTAGCTaGTGCCAGCCTAACCCAAAGCCGCATCCAAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: ALPMAGEWALVS*CQPNPKPHPRE Trigger: TTCTCTTGGATGCGGCTTTGGGTTAGGCTGGCAGCAGCTAACTAAGGCCCACTCCCCGGCCATAGGGAGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555305.5 |
||
| CDS CCA 72 bp | GTGATGGGCACAAAGGCTGCAGGGTTAAGGCTGCTCTaGAGTCCATTCAGCTGCCCTTCCGCGGAGGACCCT | + |
|
Preference number: 6 (lower is better) Translates to: VMGTKAAGLRLL*SPFSCPSAEDP Trigger: AGGGTCCTCCGCGGAAGGGCAGCTGAATGGACTCCAGAGCAGCCTTAACCCTGCAGCCTTTGTGCCCATCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555677.5 |
||
| CDS TCA 72 bp | CTCCGTCTGCAGTGGGTCCCACTCAGTGAGGACCTCTaGGGACACCTCAGTGAACAGATGGTCCCAGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LRLQWVPLSEDL*GHLSEQMVPVP Trigger: TGGGACTGGGACCATCTGTTCACTGAGGTGTCCTCAGAGGTCCTCACTGAGTGGGACCCACTGCAGACGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000542766.5 ENST00000554026.5 ENST00000555305.5 ENST00000679083.1 |
||
| CDS GCA 72 bp | CTCCCTATGGCCGGGGAGTGGGCCTTAGTTAGCTGCTaGCAGCCTAACCCAAAGCCGCATCCAAGAGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LPMAGEWALVSC*QPNPKPHPREA Trigger: TGCTTCTCTTGGATGCGGCTTTGGGTTAGGCTGGCAGCAGCTAACTAAGGCCCACTCCCCGGCCATAGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555305.5 |
||
| CDS CAA 72 bp | TCATCCTCCCGGACTTCGTGCTCCGGCGCGAGCACTTaGGTGAGGAGTTTCAGGTCGATCTCCCCATCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSSRTSCSGAST*VRSFRSISPSS Trigger: ACTGGATGGGGAGATCGACCTGAAACTCCTCACCAAAGTGCTCGCGCCGGAGCACGAAGTCCGGGAGGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000542766.5 ENST00000554026.5 ENST00000555305.5 ENST00000679083.1 |
||
| CDS TCA 72 bp | GGAATTCTTGCCATTGAGGTGATTCTCGGCCTGCGCTaGCTCCTGTTGAGCTCGGCGACCCATCTTGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GILAIEVILGLR*LLLSSATHLGP Trigger: AGGGCCAAGATGGGTCGCCGAGCTCAACAGGAGTCAGCGCAGGCCGAGAATCACCTCAATGGCAAGAATTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000542766.5 ENST00000553338.1 ENST00000554026.5 ENST00000555305.5 ENST00000555370.5 ENST00000555677.5 ENST00000556742.1 ENST00000679083.1 |
||
| CDS TCA 72 bp | GGTCACGGTAGGTCATCACCCGCTTTATCTGGATGCTaGAGGAAAGAGAGAGCGAGAGGCGGGAACCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GHGRSSPALSGC*RKERARGGNPR Trigger: CCTGGGGTTCCCGCCTCTCGCTCTCTCTTTCCTTCAGCATCCAGATAAAGCGGGTGATGACCTACCGTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554026.5 ENST00000555305.5 |
||
| CDS TCA 72 bp | TCACAACAGCCACCAAACCCTGATGCGAGTGAAGAATaGGTCTCCTTATCCCTCCCGCCGCCTCCTCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SQQPPNPDASEE*VSLSLPPPPPS Trigger: GGAGGGAGGAGGCGGCGGGAGGGATAAGGAGACTCATTCTTCACTCGCATCAGGGTTTGGTGGCTGTTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555305.5 |
||
| CDS TCA 72 bp | GAACCCACGTTGCCCAGGACTCCGGTCATGCCATACTaGTTCCGGGTTCTTTGCGGTTCGAAGCCTTCACGG | + |
|
Preference number: 6 (lower is better) Translates to: EPTLPRTPVMPY*FRVLCGSKPSR Trigger: CCGTGAAGGCTTCGAACCGCAAAGAACCCGGAATCAGTATGGCATGACCGGAGTCCTGGGCAACGTGGGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553438.1 |
||
| CDS GCA 72 bp | CCAACCGTGTGCACCCCCACCCATACTCTTATGAGCTaGTGGTACTCACTTCGAAGCCTTCACGGAATCACC | + |
|
Preference number: 6 (lower is better) Translates to: PTVCTPTHTLMS*WYSLRSLHGIT Trigger: GGTGATTCCGTGAAGGCTTCGAAGTGAGTACCAGCAGCTCATAAGAGTATGGGTGGGGGTGCACACGGTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555677.5 |
||
| CDS CCA 72 bp | AGAGAGGGCTTCCATGGAATTCTCAGGGCTGCTGGCTaGCCCCTTCCCATGAGAATCAGAAATGAGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: REGFHGILRAAG*PLPMRIRNEAL Trigger: CAGAGCCTCATTTCTGATTCTCATGGGAAGGGGCCAGCCAGCAGCCCTGAGAATTCCATGGAAGCCCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555305.5 |
||
| CDS CCA 72 bp | ACCGTGTGCACCCCCACCCATACTCTTATGAGCTGCTaGTACTCACTTCGAAGCCTTCACGGAATCACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TVCTPTHTLMSC*YSLRSLHGITC Trigger: GCAGGTGATTCCGTGAAGGCTTCGAAGTGAGTACCAGCAGCTCATAAGAGTATGGGTGGGGGTGCACACGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555677.5 |
||
| CDS GCA 72 bp | ACAGTTAAGAACCCACGTTGCCCAGGACTCCGGTCATaGCATACTGATTCCGGGTTCTTTGCGGTTCGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: TVKNPRCPGLRS*HTDSGFFAVRS Trigger: GCTTCGAACCGCAAAGAACCCGGAATCAGTATGGCATGACCGGAGTCCTGGGCAACGTGGGTTCTTAACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553438.1 |
||
| CDS CAA 72 bp | GCCTGCCTCCCTTCCATGCATAAAACAGTGCGGCTTTaGCAGGAACTTCTGCGACGAGGTGTCCCAAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: ACLPSMHKTVRL*QELLRRGVPKE Trigger: TTCCTTTGGGACACCTCGTCGCAGAAGTTCCTGCAAAAGCCGCACTGTTTTATGCATGGAAGGGAGGCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553338.1 ENST00000679083.1 |
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| CDS CAA 72 bp | GGCCCTCTCCCTTCCATGCATAAAACAGTGCGGCTTTaGCAGGAACTTCTGCGACGAGGTGTCCCAAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GPLPSMHKTVRL*QELLRRGVPKE Trigger: TTCCTTTGGGACACCTCGTCGCAGAAGTTCCTGCAAAAGCCGCACTGTTTTATGCATGGAAGGGAGAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555370.5 |
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| CDS TCA 72 bp | TCTCCCCATCCAGTGTCTGAATGGCTGAGTACTTCATaGGGTCATTGTCCAGGTCACGGTAGGTCATCACCC | + |
|
Preference number: 6 (lower is better) Translates to: SPHPVSEWLSTS*GHCPGHGRSSP Trigger: GGGTGATGACCTACCGTGACCTGGACAATGACCTCATGAAGTACTCAGCCATTCAGACACTGGATGGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000542766.5 ENST00000554026.5 ENST00000555305.5 ENST00000679083.1 |
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| CDS TCA 72 bp | ATGGAATTCTCAGGGCTGCTGGCTGGCCCCTTCCCATaGGAATCAGAAATGAGGCTCTGGGAACCTGTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: MEFSGLLAGPFP*ESEMRLWEPVE Trigger: TTCTACAGGTTCCCAGAGCCTCATTTCTGATTCTCATGGGAAGGGGCCAGCCAGCAGCCCTGAGAATTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555305.5 |
||
| CDS TCA 72 bp | GACTTCCTCCAAGGGCCTCTTACCTCCTCCATAATCTaGTCCATTCAGGCTCTGTGGTCTGAGGCGGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: DFLQGPLTSSII*SIQALWSEAEI Trigger: GATTTCCGCCTCAGACCACAGAGCCTGAATGGATCAGATTATGGAGGAGGTAAGAGGCCCTTGGAGGAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554233.1 |
||
| CDS GCA 72 bp | ACCCGCTTTATCTGGATGCTGGGAGGGGCTGCCACCTaGAAAACAAAGTCTTCTTCCTGTACTTCCTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: TRFIWMLGGAAT*KTKSSSCTSSR Trigger: TCTGGAGGAAGTACAGGAAGAAGACTTTGTTTTGCAGGTGGCAGCCCCTCCCAGCATCCAGATAAAGCGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000542766.5 ENST00000679083.1 |
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| CDS GCA 72 bp | CCTGCCTCCCTTCCATGCATAAAACAGTGCGGCTTTTaGAGGAACTTCTGCGACGAGGTGTCCCAAAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: PASLPCIKQCGF*RNFCDEVSQRK Trigger: TTTCCTTTGGGACACCTCGTCGCAGAAGTTCCTGCAAAAGCCGCACTGTTTTATGCATGGAAGGGAGGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000553338.1 ENST00000679083.1 |
||
| CDS GCA 72 bp | GCCCTCTCCCTTCCATGCATAAAACAGTGCGGCTTTTaGAGGAACTTCTGCGACGAGGTGTCCCAAAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: ALSLPCIKQCGF*RNFCDEVSQRK Trigger: TTTCCTTTGGGACACCTCGTCGCAGAAGTTCCTGCAAAAGCCGCACTGTTTTATGCATGGAAGGGAGAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555370.5 |
||
| CDS CAA 90 bp | GACCCTGGGTCTTATTTGGTGTTGTTAGCTGTCAGCACTTGCGACTaGCAACGAGCAAAAAGGGATGTCCTCGCCTCGCAGTTCAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: DPGSYLVLLAVSTCD*QRAKRDVLASQFRL Trigger: AAGCCTGAACTGCGAGGCGAGGACATCCCTTTTTGCTCGTTGCAAGTCGCAAGTGCTGACAGCTAACAACACCAAATAAGACCCAGGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554423.1 |
||
| CDS CAA 90 bp | GGACTGAGACCCTGGGTCTTATTTGGTGTTGTTAGCTGTCAGCACTaGCGACTTGCAACGAGCAAAAAGGGATGTCCTCGCCTCGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: GLRPWVLFGVVSCQH*RLATSKKGCPRLAV Trigger: AACTGCGAGGCGAGGACATCCCTTTTTGCTCGTTGCAAGTCGCAAGTGCTGACAGCTAACAACACCAAATAAGACCCAGGGTCTCAGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554423.1 |
||
| CDS TCA 72 bp | TCTCTCCAGTCAGAGTCAAAGAGGAATTCTTGCCATTaGGGTGATTCTCGGCCTGCGCTGACTCCTGTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SLQSESKRNSCH*GDSRPALTPVE Trigger: CTCAACAGGAGTCAGCGCAGGCCGAGAATCACCTCAATGGCAAGAATTCCTCTTTGACTCTGACTGGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000542766.5 ENST00000553338.1 ENST00000554026.5 ENST00000555305.5 ENST00000555370.5 ENST00000555677.5 ENST00000556742.1 ENST00000679083.1 |
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| CDS TCA 72 bp | ATACTCCAGGTAGAGGTGGCAGCATTCAGCAAGGCATaGAGATGTGCATCAGCATGCGTCAGAAGACCACTG | + |
|
Preference number: 6 (lower is better) Translates to: ILQVEVAAFSKA*RCASACVRRPL Trigger: CAGTGGTCTTCTGACGCATGCTGATGCACATCTTCATGCCTTGCTGAATGCTGCCACCTCTACCTGGAGTAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554233.1 |
||
| CDS GCA 72 bp | CCAGGCGGTTATAATACTTGCAGCGGTGGAGATGGCTaGAACGTATCTAAAAGGATAAGGAGAAGGGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PGGYNTCSGGDG*NVSKRIRRREA Trigger: GGCCTCCCTTCTCCTTATCCTTTTAGATACGTTGCAGCCATCTCCACCGCTGCAAGTATTATAACCGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555305.5 |
||
| CDS CAA 72 bp | CCCTGGGTCTTATTTGGTGTTGTTAGCTGTCAGCACTaGCGACTTGCAACGAGCAAAAAGGGATGTCCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: PWVLFGVVSCQH*RLATSKKGCPR Trigger: GCGAGGACATCCCTTTTTGCTCGTTGCAAGTCGCAAGTGCTGACAGCTAACAACACCAAATAAGACCCAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554423.1 |
||
| CDS TCA 72 bp | ACAGCTCTGTTTAGGAGAAGGGTGGGACTCTGCTCCTaGTCTCAGCACATCTTGGAACCAGGCGGTTATAAT | + |
|
Preference number: 6 (lower is better) Translates to: TALFRRRVGLCS*SQHILEPGGYN Trigger: ATTATAACCGCCTGGTTCCAAGATGTGCTGAGATCAGGAGCAGAGTCCCACCCTTCTCCTAAACAGAGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555305.5 |
||
| CDS CAA 72 bp | TCTTATTTGGTGTTGTTAGCTGTCAGCACTTGCGACTaGCAACGAGCAAAAAGGGATGTCCTCGCCTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SYLVLLAVSTCD*QRAKRDVLASQ Trigger: CTGCGAGGCGAGGACATCCCTTTTTGCTCGTTGCAAGTCGCAAGTGCTGACAGCTAACAACACCAAATAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554423.1 |
||
| CDS GCA 72 bp | TCTCAGCACATCTTGGAACCAGGCGGTTATAATACTTaGAGCGGTGGAGATGGCTGCAACGTATCTAAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SQHILEPGGYNT*SGGDGCNVSKR Trigger: CCTTTTAGATACGTTGCAGCCATCTCCACCGCTGCAAGTATTATAACCGCCTGGTTCCAAGATGTGCTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555305.5 |
||
| CDS CCA 72 bp | ATACAGCAGGGGATGACCAGAATGGGAATAACAAAATaGGAACCCTGGATGGAGCCCAACACCAGAAAGATC | + |
|
Preference number: 6 (lower is better) Translates to: IQQGMTRMGITK*EPWMEPNTRKI Trigger: GATCTTTCTGGTGTTGGGCTCCATCCAGGGTTCCCATTTTGTTATTCCCATTCTGGTCATCCCCTGCTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000553438.1 ENST00000554026.5 ENST00000555305.5 |
||
| CDS GCA 72 bp | TTTTGTGATAGCATGCGTTCAGATCCAGCTGTTGTTTaGCTGTTTGGGTACCGTTCGAAGCCTTCACGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: FCDSMRSDPAVV*LFGYRSKPSRN Trigger: ATTCCGTGAAGGCTTCGAACGGTACCCAAACAGGCAAACAACAGCTGGATCTGAACGCATGCTATCACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238628.10 |
||
| CDS GCA 72 bp | ATATCTGATTTAACCTACCTGGGAGGGGCTGCCACCTaGAAAACAAAGTCTTCTTCCTGTACTTCCTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ISDLTYLGGAAT*KTKSSSCTSSR Trigger: TCTGGAGGAAGTACAGGAAGAAGACTTTGTTTTGCAGGTGGCAGCCCCTCCCAGGTAGGTTAAATCAGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000553438.1 ENST00000554026.5 ENST00000555305.5 |
||
| CDS CAA 72 bp | AACCCTGGATGGAGCCCAACACCAGAAAGATCCAGATaGACATCAAGGTCCACTATAGATGATATCTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: NPGWSPTPERSR*TSRSTIDDIWS Trigger: ACTCCAGATATCATCTATAGTGGACCTTGATGTCAATCTGGATCTTTCTGGTGTTGGGCTCCATCCAGGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553438.1 ENST00000554026.5 ENST00000555305.5 |
||
| CDS CAA 90 bp | GTAAAAATTCGGAGCTGCTTACAAGCTTCTTTAGCTTTAAGCTCATaGCATTTCTTCATGTCTAGAGCATGGGTGACGGGCTCAGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VKIRSCLQASLALSS*HFFMSRAWVTGSGV Trigger: CACACCTGAGCCCGTCACCCATGCTCTAGACATGAAGAAATGCAATGAGCTTAAAGCTAAAGAAGCTTGTAAGCAGCTCCGAATTTTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000238628.10 ENST00000314067.11 ENST00000554026.5 ENST00000679083.1 |
||
| CDS TCA 72 bp | ACAGCTTTATGTCAGCCTCACTCCAAATTGGATTGTTaGGAGTGTAAGTGCAGGTTGAGCGAGTGGCTTAAA | + |
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Preference number: 6 (lower is better) Translates to: TALCQPHSKLDC*ECKCRLSEWLK Trigger: TTTAAGCCACTCGCTCAACCTGCACTTACACTCTCAACAATCCAATTTGGAGTGAGGCTGACATAAAGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000554233.1 ENST00000554423.1 |
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| CDS CAA 90 bp | CAAAATGGGAACCCTGGATGGAGCCCAACACCAGAAAGATCCAGATaGACATCAAGGTCCACTATAGATGATATCTGGAGTGTATTAATT | + |
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Preference number: 6 (lower is better) Translates to: QNGNPGWSPTPERSR*TSRSTIDDIWSVLI Trigger: AATTAATACACTCCAGATATCATCTATAGTGGACCTTGATGTCAATCTGGATCTTTCTGGTGTTGGGCTCCATCCAGGGTTCCCATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000553438.1 ENST00000554026.5 ENST00000555305.5 |
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| CDS CAA 90 bp | AGGTTTCAAAAGTGGAGGCAAATTAGTATATCTCAAGTGCTTTATTaGTCTGCAGTCCTCTTTAGAGACAAGCCCCACAACCAGCATGAG | + |
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Preference number: 6 (lower is better) Translates to: RFQKWRQISISQVLY*SAVLFRDKPHNQHE Trigger: CTCATGCTGGTTGTGGGGCTTGTCTCTAAAGAGGACTGCAGACAAATAAAGCACTTGAGATATACTAATTTGCCTCCACTTTTGAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000554233.1 ENST00000554423.1 |
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| CDS GCA 72 bp | GGTTTCAAAAGTGGAGGCAAATTAGTATATCTCAAGTaGTTTATTTGTCTGCAGTCCTCTTTAGAGACAAGC | + |
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Preference number: 6 (lower is better) Translates to: GFKSGGKLVYLK*FICLQSSLETS Trigger: GCTTGTCTCTAAAGAGGACTGCAGACAAATAAAGCACTTGAGATATACTAATTTGCCTCCACTTTTGAAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554233.1 ENST00000554423.1 |
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| CDS TCA 72 bp | AGAAAGATCCAGATTGACATCAAGGTCCACTATAGATaGTATCTGGAGTGTATTAATTCACGTGTTCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: RKIQIDIKVHYR*YLECINSRVLC Trigger: GCAAAGAACACGTGAATTAATACACTCCAGATATCATCTATAGTGGACCTTGATGTCAATCTGGATCTTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553438.1 ENST00000554026.5 ENST00000555305.5 |
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