RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IFT22 (Homo sapiens)

Ensembl gene IDs: ENSG00000128581

Ensembl transcript IDs: ENST00000315322.10, ENST00000422177.5, ENST00000430911.5, ENST00000437644.2, ENST00000440362.5, ENST00000468833.1, ENST00000485695.1, ENST00000495166.1, ENST00000498704.6, ENST00000517481.5, ENST00000621899.4

Found 351 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATCTCGGCTCACTGCAGTCTCCGCCTCGCGGGTTCAGGCAATTCTaGCTCACCCTTCTGAGTAGCTGGGACTACAGGCATGCCCCACCA +
Preference number: 1 (lower is better)
Translates to: DLGSLQSPPRGFRQF*LTLLSSWDYRHAPP
Trigger: TGGTGGGGCATGCCTGTAGTCCCAGCTACTCAGAAGGGTGAGGCAGAATTGCCTGAACCCGCGAGGCGGAGACTGCAGTGAGCCGAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315322.10
ENST00000621899.4
3UTR TCA 90 bp TTCCGGTGGCTTGGGATGTCAGCATTGAAGACGATCACCACTCCATaGGCATCCTTCATCAGGGCCGGCCAGCAGGACTCAAACTTAGCA +
Preference number: 1 (lower is better)
Translates to: FRWLGMSALKTITTP*ASFIRAGQQDSNLA
Trigger: TGCTAAGTTTGAGTCCTGCTGGCCGGCCCTGATGAAGGATGCTCATGGAGTGGTGATCGTCTTCAATGCTGACATCCCAAGCCACCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR GCA 90 bp AGGCGTAAGCCACTGCACCCGGCCTCCAGGCTCAAGCAATTCTTATaGCTCAGCCACATGAGTAGCTGGTATTACAGGTGTGTGCCAACA +
Preference number: 1 (lower is better)
Translates to: RRKPLHPASRLKQFL*LSHMSSWYYRCVPT
Trigger: TGTTGGCACACACCTGTAATACCAGCTACTCATGTGGCTGAGGCATAAGAATTGCTTGAGCCTGGAGGCCGGGTGCAGTGGCTTACGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315322.10
3UTR TCA 90 bp AATACCACATCTCCATTTCCTTCCGGTGGCTTGGGATGTCAGCATTaGAGACGATCACCACTCCATGAGCATCCTTCATCAGGGCCGGCC +
Preference number: 1 (lower is better)
Translates to: NTTSPFPSGGLGCQH*RRSPLHEHPSSGPA
Trigger: GGCCGGCCCTGATGAAGGATGCTCATGGAGTGGTGATCGTCTTCAATGCTGACATCCCAAGCCACCGGAAGGAAATGGAGATGTGGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR TCA 90 bp ACTGGGGATGTGGCAGTCCCAGGTGAAGGCTGGCTAGGTCATAATTaGCATCTCCTCCCTGTCTCTGCTCTCAGACATGGAGTTGATTAT +
Preference number: 1 (lower is better)
Translates to: TGDVAVPGEGWLGHN*HLLPVSALRHGVDY
Trigger: ATAATCAACTCCATGTCTGAGAGCAGAGACAGGGAGGAGATGTCAATTATGACCTAGCCAGCCTTCACCTGGGACTGCCACATCCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR GCA 90 bp CATAGCTCGAATTCACAGCCCGTGCCTTTGTTGTTGCTGGTAACATaGGGGTTCTCAAATTCTAGGATCCTCACTCCTTGGGTTGGGCTG +
Preference number: 1 (lower is better)
Translates to: HSSNSQPVPLLLLVT*GFSNSRILTPWVGL
Trigger: CAGCCCAACCCAAGGAGTGAGGATCCTAGAATTTGAGAACCCGCATGTTACCAGCAACAACAAAGGCACGGGCTGTGAATTCGAGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR GCA 90 bp GCTGTCTATGGTCAGCAGCTAGAACAGCAGTGCACACACAGCAGGTaGTCAGCCAGTCGGTATTTGTTGGGTGAATCAAGGAATGAAAAT +
Preference number: 1 (lower is better)
Translates to: AVYGQQLEQQCTHSR*SASRYLLGESRNEN
Trigger: ATTTTCATTCCTTGATTCACCCAACAAATACCGACTGGCTGAGCACCTGCTGTGTGTGCACTGCTGTTCTAGCTGCTGACCATAGACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
3UTR CCA 90 bp TGGTGTGCAATTAGCATACACTGTGTGTCCTGTAAGGACGGCTGTTaGACAAAGCAGGAATACCACATCTCCATTTCCTTCCGGTGGCTT +
Preference number: 1 (lower is better)
Translates to: WCAISIHCVSCKDGC*TKQEYHISISFRWL
Trigger: AAGCCACCGGAAGGAAATGGAGATGTGGTATTCCTGCTTTGTCCAACAGCCGTCCTTACAGGACACACAGTGTATGCTAATTGCACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR GCA 90 bp GTCTTTTTCATTTATGCTGTCTATGGTCAGCAGCTAGAACAGCAGTaGACACACAGCAGGTGCTCAGCCAGTCGGTATTTGTTGGGTGAA +
Preference number: 1 (lower is better)
Translates to: VFFIYAVYGQQLEQQ*THSRCSASRYLLGE
Trigger: TTCACCCAACAAATACCGACTGGCTGAGCACCTGCTGTGTGTGCACTGCTGTTCTAGCTGCTGACCATAGACAGCATAAATGAAAAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
3UTR CCA 90 bp TTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTTATGCTGTCTATaGTCAGCAGCTAGAACAGCAGTGCACACACAGCAGGTGCTCAGC +
Preference number: 1 (lower is better)
Translates to: FHEGGNFCLFHLCCL*SAARTAVHTQQVLS
Trigger: GCTGAGCACCTGCTGTGTGTGCACTGCTGTTCTAGCTGCTGACCATAGACAGCATAAATGAAAAAGACAGAAATTCCCACCTTCGTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
3UTR TCA 90 bp GGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACATATGTaGGGTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTG +
Preference number: 1 (lower is better)
Translates to: GCDGYKSTNCLTGHM*GGKSLHFTGLWEVL
Trigger: CAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCACCTCACATATGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
3UTR GCA 90 bp AATGGAGAGTTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTTATaGTGTCTATGGTCAGCAGCTAGAACAGCAGTGCACACACAGCAG +
Preference number: 1 (lower is better)
Translates to: NGEFHEGGNFCLFHL*CLWSAARTAVHTQQ
Trigger: CTGCTGTGTGTGCACTGCTGTTCTAGCTGCTGACCATAGACAGCATAAATGAAAAAGACAGAAATTCCCACCTTCGTGGAACTCTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
3UTR TCA 90 bp TATTCATCTCCCTTAGGTGCCTCAACTTTTTCTCCCACTCTCAGCTaGAAAGAGCTACATCTACCATTTCATCTACTTAGTGTATTTTCT +
Preference number: 1 (lower is better)
Translates to: YSSPLGASTFSPTLS*KELHLPFHLLSVFS
Trigger: AGAAAATACACTAAGTAGATGAAATGGTAGATGTAGCTCTTTTCAGCTGAGAGTGGGAGAAAAAGTTGAGGCACCTAAGGGAGATGAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315322.10
3UTR-3UTR TCA 90 bp TATGCTGTCTATGGTCAGCAGCTAGAACAGCAGTGCACACACAGCAGGTGCTCAAGTGAACGCCCTGTGTaGCAGGTGCCTTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: YAVYGQQLEQQCTHSRCSSERPV*QVPSCR
Trigger: CCTGCAGGAAGGCACCTGTCACACAGGGCGTTCACT...TGAGCACCTGCTGTGTGTGCACTGCTGTTCTAGCTGCTGACCATAGACAGCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR TCA 90 bp GGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACATATGTGAGGTGGAGTGAACGCCCTGTGTaGCAGGTGCCTTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: GLRRLQVHKLFNWTYVRWSERPV*QVPSCR
Trigger: CCTGCAGGAAGGCACCTGTCACACAGGGCGTTCACT...CCACCTCACATATGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR TCA 90 bp TCCAGGTTTGAGTGCACCAGCTTCAGCTTGTTCAAGGGTGGCGACAAAGACAGGAGAGCACAGATGGTCTaGGTGAACGCCCTGTGTGAC +
Preference number: 2 (lower is better)
Translates to: SRFECTSFSLFKGGDKDRRAQMV*VNALCD
Trigger: GTCACACAGGGCGTTCACTCAGACCATCTGTGCTCT...CCTGTCTTTGTCGCCACCCTTGAACAAGCTGAAGCTGGTGCACTCAAACCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR-3UTR TCA 90 bp CAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTAGAGCACAGATGGTCTaGGTGAACGCCCTGTGTGAC +
Preference number: 2 (lower is better)
Translates to: QICTEKHADFTGDVAVPGRAQMV*VNALCD
Trigger: GTCACACAGGGCGTTCACTCAGACCATCTGTGCTCT...ACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR TCA 90 bp TGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGAGTGAACGCCCTGTGTaGCAGGTGCCTTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: CDFRSAPRNMLISLGMWQSERPV*QVPSCR
Trigger: CCTGCAGGAAGGCACCTGTCACACAGGGCGTTCACT...CTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR TCA 90 bp GCTGTTGGACAAAGCAGGAATACCACATCTCCATTTCCTTCCGGTGGCTTGGGAACGATCACCACTCCATaGGCATCCTTCATCAGGGCC +
Preference number: 2 (lower is better)
Translates to: AVGQSRNTTSPFPSGGLGTITTP*ASFIRA
Trigger: GGCCCTGATGAAGGATGCTCATGGAGTGGTGATCGT...TCCCAAGCCACCGGAAGGAAATGGAGATGTGGTATTCCTGCTTTGTCCAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR CAA 90 bp GCATCGCCACCACAGTCCCATAGCTCGAATTCACAGCCCGTGCCTTaGTTGTTGCTGGTAACATGCGGGTTCTCAAATTCTAGGATCCTC +
Preference number: 2 (lower is better)
Translates to: ASPPQSHSSNSQPVP*LLLVTCGFSNSRIL
Trigger: GAGGATCCTAGAATTTGAGAACCCGCATGTTACCAGCAACAACAAAGGCACGGGCTGTGAATTCGAGCTATGGGACTGTGGTGGCGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR-3UTR TCA 90 bp TCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGAGTGAACGCCCTGTGTaGCAGGTGCCTTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: SLHFTGLWEVLGPGNPNLSERPV*QVPSCR
Trigger: CCTGCAGGAAGGCACCTGTCACACAGGGCGTTCACT...CAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
3UTR CAA 90 bp CCACCACAGTCCCATAGCTCGAATTCACAGCCCGTGCCTTTGTTGTaGCTGGTAACATGCGGGTTCTCAAATTCTAGGATCCTCACTCCT +
Preference number: 2 (lower is better)
Translates to: PPQSHSSNSQPVPLL*LVTCGFSNSRILTP
Trigger: AGGAGTGAGGATCCTAGAATTTGAGAACCCGCATGTTACCAGCAACAACAAAGGCACGGGCTGTGAATTCGAGCTATGGGACTGTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR CAA 90 bp TCGCCACCACAGTCCCATAGCTCGAATTCACAGCCCGTGCCTTTGTaGTTGCTGGTAACATGCGGGTTCTCAAATTCTAGGATCCTCACT +
Preference number: 2 (lower is better)
Translates to: SPPQSHSSNSQPVPL*LLVTCGFSNSRILT
Trigger: AGTGAGGATCCTAGAATTTGAGAACCCGCATGTTACCAGCAACAACAAAGGCACGGGCTGTGAATTCGAGCTATGGGACTGTGGTGGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR CAA 90 bp GGTGGCGACAAAGACAGGCTTCCTTTATCATCTCCAGAGCCTGGTTaGTGGTGTGCAATTAGCATACACTGTGTGTCCTGTAAGGACGGC +
Preference number: 2 (lower is better)
Translates to: GGDKDRLPLSSPEPG*WCAISIHCVSCKDG
Trigger: GCCGTCCTTACAGGACACACAGTGTATGCTAATTGCACACCACAAACCAGGCTCTGGAGATGATAAAGGAAGCCTGTCTTTGTCGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR-3UTR TCA 90 bp GAGGTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAACACCGAGAAACATGCTaGTTTCACTGGGGATGTGGC +
Preference number: 2 (lower is better)
Translates to: EVVNPSILQVFGKFWGQEHRETC*FHWGCG
Trigger: GCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTG...TTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR TCA 90 bp TGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGAGAGCACAGATGGTCTaGGTGAACGCCCTGTGTGAC +
Preference number: 2 (lower is better)
Translates to: CDFRSAPRNMLISLGMWQRAQMV*VNALCD
Trigger: GTCACACAGGGCGTTCACTCAGACCATCTGTGCTCT...CTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR TCA 90 bp GGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAGAGCACAGATGGTCTaGGTGAACGCCCTGTGTGAC +
Preference number: 2 (lower is better)
Translates to: GKSLHFTGLWEVLGPGNPRAQMV*VNALCD
Trigger: GTCACACAGGGCGTTCACTCAGACCATCTGTGCTCT...TGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR GCA 90 bp CAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTGTTGTATCATTGGGCTaGGACGGTTACAAGTCCACA +
Preference number: 2 (lower is better)
Translates to: QICTEKHADFTGDVAVPGVVSLG*DGYKST
Trigger: TGTGGACTTGTAACCGTCGCAGCCCAATGATACAAC...ACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR TCA 90 bp CACCCGGCCTCCAGGCTCAAGCAATTCTTATGCCTCAGCCACATGAGTAGCTGGAAAGTGCCACAGTATTaGTTTGGGGGTTACAAACAT +
Preference number: 2 (lower is better)
Translates to: HPASRLKQFLCLSHMSSWKVPQY*FGGYKH
Trigger: ATGTTTGTAACCCCCAAATCAATACTGTGGCACTTT...CCAGCTACTCATGTGGCTGAGGCATAAGAATTGCTTGAGCCTGGAGGCCGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315322.10
3UTR-3UTR CCA 90 bp CAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTCTACTGTTGTATCATTaGGCTGCGACGGTTACAAGT +
Preference number: 2 (lower is better)
Translates to: QICTEKHADFTGDVAVPGLLLYH*AATVTS
Trigger: ACTTGTAACCGTCGCAGCCCAATGATACAACAGTAG...ACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR TCA 90 bp ATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACATATGTGAGAGCACAGATGGTCTaGGTGAACGCCCTGTGTGAC +
Preference number: 2 (lower is better)
Translates to: IIGLRRLQVHKLFNWTYVRAQMV*VNALCD
Trigger: GTCACACAGGGCGTTCACTCAGACCATCTGTGCTCT...CACATATGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR TCA 90 bp ATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTCACCGAGAAACATGCTaGTTTCACTGGGGATGTGGC +
Preference number: 2 (lower is better)
Translates to: IPPFYRSLGSSGARKSKFHRETC*FHWGCG
Trigger: GCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTG...AAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR TCA 90 bp AAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTCACCGAGAAACATGCTaGTTTCACTGGGGATGTGGC +
Preference number: 2 (lower is better)
Translates to: KTSGAGCDFRSAPRNMLIHRETC*FHWGCG
Trigger: GCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTG...AATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR TCA 90 bp ACATTTAGGAAAATGGAGAGTTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTAGTGAACGCCCTGTGTaGCAGGTGCCTTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: TFRKMESSTKVGISVFFISERPV*QVPSCR
Trigger: CCTGCAGGAAGGCACCTGTCACACAGGGCGTTCACT...AATGAAAAAGACAGAAATTCCCACCTTCGTGGAACTCTCCATTTTCCTAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR GCA 90 bp CAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTTGTCTTTTTCATTTATaGTGTCTATGGTCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: QICTEKHADFTGDVAVPGCLFHL*CLWSAA
Trigger: AGCTGCTGACCATAGACAGCATAAATGAAAAAGACA...ACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
3UTR CAA 90 bp CTAGAACAGCAGTGCACACACAGCAGGTGCTCAGCCAGTCGGTATTaGTTGGGTGAATCAAGGAATGAAAATCACATTCAAGCCAATACA +
Preference number: 2 (lower is better)
Translates to: LEQQCTHSRCSASRY*LGESRNENHIQANT
Trigger: TGTATTGGCTTGAATGTGATTTTCATTCCTTGATTCACCCAACAAATACCGACTGGCTGAGCACCTGCTGTGTGTGCACTGCTGTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR TCA 90 bp GGATCAAGTATACGTTCATTTGGCATTTTAAGTACCCCAGGTTCCCTCATTATCCACCGAGAAACATGCTaGTTTCACTGGGGATGTGGC +
Preference number: 2 (lower is better)
Translates to: GSSIRSFGILSTPGSLIIHRETC*FHWGCG
Trigger: GCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTG...GATAATGAGGGAACCTGGGGTACTTAAAATGCCAAATGAACGTATACTTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000621899.4
3UTR-3UTR CCA 90 bp TCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGTCTTTGGGAAGTTCTaGGGCCAGGAAATCCAAATT +
Preference number: 2 (lower is better)
Translates to: SGAGCDFRSAPRNMLISLVFGKF*GQEIQI
Trigger: AATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGAC...CAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR TCA 90 bp CATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGATAATACACCGAGAAACATGCTaGTTTCACTGGGGATGTGGC +
Preference number: 2 (lower is better)
Translates to: HFTGLWEVLGPGNPNLIIHRETC*FHWGCG
Trigger: GCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTG...TATTATCAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR CCA 90 bp CCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGATAATAGGATCCTCACTCCTTaGGTTGGGCTGTATTCAGTG +
Preference number: 2 (lower is better)
Translates to: PFYRSLGSSGARKSKFDNRILTP*VGLYSV
Trigger: CACTGAATACAGCCCAACCCAAGGAGTGAGGATCCT...ATTATCAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR-3UTR CCA 90 bp TGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACATATGTCTTTGGGAAGTTCTaGGGCCAGGAAATCCAAATT +
Preference number: 2 (lower is better)
Translates to: CIIGLRRLQVHKLFNWTYVFGKF*GQEIQI
Trigger: AATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGAC...ATATGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR CCA 90 bp TCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGAGAGTTCCACGAAGGTaGGAATTTCTGTCTTTTTCA +
Preference number: 2 (lower is better)
Translates to: SGAGCDFRSAPRNMLISLRVPRR*EFLSFS
Trigger: TGAAAAAGACAGAAATTCCCACCTTCGTGGAACTCT...CAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR CCA 90 bp CATTTAGGAAAATGGAGAGTTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTTCTACTGTTGTATCATTaGGCTGCGACGGTTACAAGT +
Preference number: 2 (lower is better)
Translates to: HLGKWRVPRRWEFLSFSFLLLYH*AATVTS
Trigger: ACTTGTAACCGTCGCAGCCCAATGATACAACAGTAG...AAATGAAAAAGACAGAAATTCCCACCTTCGTGGAACTCTCCATTTTCCTAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
3UTR GCA 72 bp TCACTGCAGTCTCCGCCTCGCGGGTTCAGGCAATTCTaGCTCACCCTTCTGAGTAGCTGGGACTACAGGCAT +
Preference number: 3 (lower is better)
Translates to: SLQSPPRGFRQF*LTLLSSWDYRH
Trigger: ATGCCTGTAGTCCCAGCTACTCAGAAGGGTGAGGCAGAATTGCCTGAACCCGCGAGGCGGAGACTGCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315322.10
ENST00000621899.4
3UTR TCA 72 bp CTTGGGATGTCAGCATTGAAGACGATCACCACTCCATaGGCATCCTTCATCAGGGCCGGCCAGCAGGACTCA +
Preference number: 3 (lower is better)
Translates to: LGMSALKTITTP*ASFIRAGQQDS
Trigger: TGAGTCCTGCTGGCCGGCCCTGATGAAGGATGCTCATGGAGTGGTGATCGTCTTCAATGCTGACATCCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR GCA 72 bp GGTCAGCAGCTAGAACAGCAGTGCACACACAGCAGGTaGTCAGCCAGTCGGTATTTGTTGGGTGAATCAAGG +
Preference number: 3 (lower is better)
Translates to: GQQLEQQCTHSR*SASRYLLGESR
Trigger: CCTTGATTCACCCAACAAATACCGACTGGCTGAGCACCTGCTGTGTGTGCACTGCTGTTCTAGCTGCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
3UTR GCA 72 bp CCACTGCACCCGGCCTCCAGGCTCAAGCAATTCTTATaGCTCAGCCACATGAGTAGCTGGTATTACAGGTGT +
Preference number: 3 (lower is better)
Translates to: PLHPASRLKQFL*LSHMSSWYYRC
Trigger: ACACCTGTAATACCAGCTACTCATGTGGCTGAGGCATAAGAATTGCTTGAGCCTGGAGGCCGGGTGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315322.10
3UTR-3UTR CAA 90 bp TGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGCAGCCCGTGCCTTTGTaGTTGCTGGTAACATGCGGG +
Preference number: 3 (lower is better)
Translates to: CDFRSAPRNMLISLGMWQQPVPL*LLVTCG
Trigger: CCCGCATGTTACCAGCAACAACAAAGGCACGGGCTG...CTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR-3UTR CAA 90 bp CAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTACTACTGTTGTATCATaGGGCTGCGACGGTTACAAG +
Preference number: 3 (lower is better)
Translates to: QICTEKHADFTGDVAVPGTTVVS*GCDGYK
Trigger: CTTGTAACCGTCGCAGCCCAATGATACAACAGTAGT...ACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR CAA 90 bp TCTAGTCTCAACTACTCAGAGGCTGAGCTGGCGAGATCAGTGGAGCCCAGGAGAGTGATTAAACTACTGTaGTATCATTGGGCTGCGACG +
Preference number: 3 (lower is better)
Translates to: SSLNYSEAELARSVEPRRVIKLL*YHWAAT
Trigger: CGTCGCAGCCCAATGATACAACAGTAGTTTAATCAC...TCTCCTGGGCTCCACTGATCTCGCCAGCTCAGCCTCTGAGTAGTTGAGACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315322.10
3UTR-3UTR CAA 90 bp TGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGCCCGTGCCTTTGTTGTaGCTGGTAACATGCGGGTTC +
Preference number: 3 (lower is better)
Translates to: CDFRSAPRNMLISLGMWQPVPLL*LVTCGF
Trigger: GAACCCGCATGTTACCAGCAACAACAAAGGCACGGG...CTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR-3UTR CAA 90 bp TGTTGGACAAAGCAGGAATACCACATCTCCATTTCCTTCCGGTGGCTTGGGATGTCACAGCCCGTGCCTTaGTTGTTGCTGGTAACATGC +
Preference number: 3 (lower is better)
Translates to: CWTKQEYHISISFRWLGMSQPVP*LLLVTC
Trigger: GCATGTTACCAGCAACAACAAAGGCACGGGCTGTGA...CATCCCAAGCCACCGGAAGGAAATGGAGATGTGGTATTCCTGCTTTGTCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR-3UTR CAA 90 bp GGCGGATCACTCAAGGACAGGAGTTCGAGATCAGCTGGGGCAACATGGCAAAACGGCACTTCAAATTTTTaGTCTCTGTGTGTCTGCGAA +
Preference number: 3 (lower is better)
Translates to: GGSLKDRSSRSAGATWQNGTSNF*SLCVCE
Trigger: TTCGCAGACACACAGAGACAAAAAATTTGAAGTGCC...GTTTTGCCATGTTGCCCCAGCTGATCTCGAACTCCTGTCCTTGAGTGATCCGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315322.10
3UTR TCA 72 bp TCTCCATTTCCTTCCGGTGGCTTGGGATGTCAGCATTaGAGACGATCACCACTCCATGAGCATCCTTCATCA +
Preference number: 3 (lower is better)
Translates to: SPFPSGGLGCQH*RRSPLHEHPSS
Trigger: TGATGAAGGATGCTCATGGAGTGGTGATCGTCTTCAATGCTGACATCCCAAGCCACCGGAAGGAAATGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR-3UTR CAA 90 bp TCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGCCATTTTACAGGTCTTaGGGAAGTTCTGGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: SGAGCDFRSAPRNMLISLPFYRS*GSSGAR
Trigger: CCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGG...CAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
3UTR CCA 72 bp ACAAAGCAGGAATACCACATCTCCATTTCCTTCCGGTaGCTTGGGATGTCAGCATTGAAGACGATCACCACT +
Preference number: 3 (lower is better)
Translates to: TKQEYHISISFR*LGMSALKTITT
Trigger: AGTGGTGATCGTCTTCAATGCTGACATCCCAAGCCACCGGAAGGAAATGGAGATGTGGTATTCCTGCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR CCA 72 bp GACAGGCTTCCTTTATCATCTCCAGAGCCTGGTTTGTaGTGTGCAATTAGCATACACTGTGTGTCCTGTAAG +
Preference number: 3 (lower is better)
Translates to: DRLPLSSPEPGL*CAISIHCVSCK
Trigger: CTTACAGGACACACAGTGTATGCTAATTGCACACCACAAACCAGGCTCTGGAGATGATAAAGGAAGCCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR-3UTR CAA 90 bp TTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTTATGCTGTCTATGGTCAGCACCATTTTACAGGTCTTaGGGAAGTTCTGGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: FHEGGNFCLFHLCCLWSAPFYRS*GSSGAR
Trigger: CCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGG...TGCTGACCATAGACAGCATAAATGAAAAAGACAGAAATTCCCACCTTCGTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
3UTR TCA 72 bp CAGTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTaGTTTCAGATCTGCACCGAGAAACATGCTGATTTC +
Preference number: 3 (lower is better)
Translates to: QSEGEENIRSWM*FQICTEKHADF
Trigger: GAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
3UTR CCA 72 bp ATTAGCATACACTGTGTGTCCTGTAAGGACGGCTGTTaGACAAAGCAGGAATACCACATCTCCATTTCCTTC +
Preference number: 3 (lower is better)
Translates to: ISIHCVSCKDGC*TKQEYHISISF
Trigger: GAAGGAAATGGAGATGTGGTATTCCTGCTTTGTCCAACAGCCGTCCTTACAGGACACACAGTGTATGCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR GCA 72 bp TTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTTATaGTGTCTATGGTCAGCAGCTAGAACAGCAGTGCAC +
Preference number: 3 (lower is better)
Translates to: FHEGGNFCLFHL*CLWSAARTAVH
Trigger: GTGCACTGCTGTTCTAGCTGCTGACCATAGACAGCATAAATGAAAAAGACAGAAATTCCCACCTTCGTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR CAA 90 bp TTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTTATGCTGTCTATGGTCAGCAACTACTGTTGTATCATaGGGCTGCGACGGTTACAAG +
Preference number: 3 (lower is better)
Translates to: FHEGGNFCLFHLCCLWSATTVVS*GCDGYK
Trigger: CTTGTAACCGTCGCAGCCCAATGATACAACAGTAGT...TGCTGACCATAGACAGCATAAATGAAAAAGACAGAAATTCCCACCTTCGTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
3UTR-3UTR CAA 90 bp AAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTGCCAGTCGGTATTTGTaGGGTGAATCAAGGAATGAA +
Preference number: 3 (lower is better)
Translates to: KTSGAGCDFRSAPRNMLIASRYL*GESRNE
Trigger: TTCATTCCTTGATTCACCCAACAAATACCGACTGGC...AATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
3UTR TCA 72 bp GGTTACAAGTCCACAAACTGTTTAACTGGACATATGTaGGGTGGTAAATCCCTCCATTTTACAGGTCTTTGG +
Preference number: 3 (lower is better)
Translates to: GYKSTNCLTGHM*GGKSLHFTGLW
Trigger: CCAAAGACCTGTAAAATGGAGGGATTTACCACCTCACATATGTCCAGTTAAACAGTTTGTGGACTTGTAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp GGCGGATCACTCAAGGACAGGAGTTCGAGATCAGCTGGGGCAACATGGCAAAACCAGGCTGGAGTGCAGTaGCGGGACCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GGSLKDRSSRSAGATWQNQAGVQ*RDLGSL
Trigger: CAGTGAGCCGAGGTCCCGCCACTGCACTCCAGCCTG...GTTTTGCCATGTTGCCCCAGCTGATCTCGAACTCCTGTCCTTGAGTGATCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR GCA 90 bp ACGCCCTGTGTGACAGGTGCCTTCCTGCAGGTAGGAACACTTCCTCTGCAGTCAGCGATCTCGGCTCAGTaGAATCTCTGCCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TPCVTGAFLQVGTLPLQSAISAQ*NLCLPG
Trigger: GCCTGGGAGGCAGAGATTGCACTGAGCCGAGATCGC...TGACTGCAGAGGAAGTGTTCCTACCTGCAGGAAGGCACCTGTCACACAGGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000621899.4
CDS-3UTR TCA 90 bp ACGCCCTGTGTGACAGGTGCCTTCCTGCAGGTAGGAACACTTCCTCTGCAGTCATCTGCCTCACCCTTCTaGGTAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: TPCVTGAFLQVGTLPLQSSASPF*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGAAGGGTGAGGCAGA...TGACTGCAGAGGAAGTGTTCCTACCTGCAGGAAGGCACCTGTCACACAGGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315322.10
ENST00000621899.4
CDS-3UTR GCA 90 bp GAGGTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAATCGCCCAGGCTGGAGTaGAGTGGCGGGACCTCGGCT +
Preference number: 4 (lower is better)
Translates to: EVVNPSILQVFGKFWGQESPRLE*SGGTSA
Trigger: AGCCGAGGTCCCGCCACTGCACTCCAGCCTGGGCGA...TTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR TCA 90 bp GGCGGATCACTCAAGGACAGGAGTTCGAGATCAGCTGGGGCAACATGGCAAAACTCTGCCTCACCCTTCTaGGTAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: GGSLKDRSSRSAGATWQNSASPF*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGAAGGGTGAGGCAGA...GTTTTGCCATGTTGCCCCAGCTGATCTCGAACTCCTGTCCTTGAGTGATCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR TCA 90 bp CAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTTGGAGCCCAGGAGATTaGGGCTGCTGTGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QICTEKHADFTGDVAVPGWSPGD*GCCELW
Trigger: CCACAGCTCACAGCAGCCTCAATCTCCTGGGCTCCA...ACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR TCA 90 bp TCTAGTCTCAACTACTCAGAGGCTGAGCTGGCGAGATCAGTGGAGCCCAGGAGAACCACTTTGGGAGGCTaGGACGGGCGGATCACTCAA +
Preference number: 4 (lower is better)
Translates to: SSLNYSEAELARSVEPRRTTLGG*DGRITQ
Trigger: TTGAGTGATCCGCCCGTCTCAGCCTCCCAAAGTGGT...TCTCCTGGGCTCCACTGATCTCGCCAGCTCAGCCTCTGAGTAGTTGAGACTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR CCA 90 bp ACGCCCTGTGTGACAGGTGCCTTCCTGCAGGTAGGAACACTTCCTCTGCAGTCACAAGCTGGAGTACAGTaGCGCAATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TPCVTGAFLQVGTLPLQSQAGVQ*RNLGSL
Trigger: CAGTGAGCCAAGATTGCGCCACTGTACTCCAGCTTG...TGACTGCAGAGGAAGTGTTCCTACCTGCAGGAAGGCACCTGTCACACAGGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp AGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTGACGATCACCACTCCATaGGCATCCTTCATCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RSAPRNMLISLGMWQSQVTITTP*ASFIRA
Trigger: GGCCCTGATGAAGGATGCTCATGGAGTGGTGATCGT...CACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp GAGGTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAAGTGAACGCCCTGTGTaGCAGGTGCCTTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EVVNPSILQVFGKFWGQESERPV*QVPSCR
Trigger: CCTGCAGGAAGGCACCTGTCACACAGGGCGTTCACT...TTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp AGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTGAGAGCACAGATGGTCTaGGTGAACGCCCTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: RSAPRNMLISLGMWQSQVRAQMV*VNALCD
Trigger: GTCACACAGGGCGTTCACTCAGACCATCTGTGCTCT...CACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR GCA 90 bp TATGCTGTCTATGGTCAGCAGCTAGAACAGCAGTGCACACACAGCAGGTGCTCAGGAGTCTCGCTATGTTaGCGAGGCTGGAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: YAVYGQQLEQQCTHSRCSGVSLC*RGWRAV
Trigger: CACTGCTCTCCAGCCTCGGCAACATAGCGAGACTCC...TGAGCACCTGCTGTGTGTGCACTGCTGTTCTAGCTGCTGACCATAGACAGCATA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR TCA 90 bp GGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGAGTGAACGCCCTGTGTaGCAGGTGCCTTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GCDFRSAPRNMLISLGMWSERPV*QVPSCR
Trigger: CCTGCAGGAAGGCACCTGTCACACAGGGCGTTCACT...CCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR GCA 90 bp CACCCGGCCTCCAGGCTCAAGCAATTCTTATGCCTCAGCCACATGAGTAGCTGGGTTGTATCATTGGGCTaGGACGGTTACAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: HPASRLKQFLCLSHMSSWVVSLG*DGYKST
Trigger: TGTGGACTTGTAACCGTCGCAGCCCAATGATACAAC...CCAGCTACTCATGTGGCTGAGGCATAAGAATTGCTTGAGCCTGGAGGCCGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR GCA 90 bp GTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGATGTGAGCTGTGGTCATaGCACTGCACTCCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: VRGRRKHQELDVISDLHRCELWS*HCTPAG
Trigger: CCCGGCTGGAGTGCAGTGGCATGACCACAGCTCACA...TCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR CCA 90 bp AGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTGCAGCTTGTTCAAGGGTaGCGACAAAGACAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RSAPRNMLISLGMWQSQVQLVQG*RQRQAS
Trigger: GGAAGCCTGTCTTTGTCGCCACCCTTGAACAAGCTG...CACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp GGCCAGCAGGACTCAAACTTAGCATCGCCACCACAGTCCCATAGCTCGAATTCACAGCTTGTTCAAGGGTaGCGACAAAGACAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GQQDSNLASPPQSHSSNSQLVQG*RQRQAS
Trigger: GGAAGCCTGTCTTTGTCGCCACCCTTGAACAAGCTG...TGAATTCGAGCTATGGGACTGTGGTGGCGATGCTAAGTTTGAGTCCTGCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
CDS-3UTR CCA 90 bp CAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTCAGCTTGTTCAAGGGTaGCGACAAAGACAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: QICTEKHADFTGDVAVPGQLVQG*RQRQAS
Trigger: GGAAGCCTGTCTTTGTCGCCACCCTTGAACAAGCTG...ACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp ACGCCCTGTGTGACAGGTGCCTTCCTGCAGGTAGGAACACTTCCTCTGCAGTCAGTGACCCACTGCAACTaGCCAGGCACTTCAATTTTT +
Preference number: 4 (lower is better)
Translates to: TPCVTGAFLQVGTLPLQSVTHCN*PGTSIF
Trigger: AAAAATTGAAGTGCCTGGCCAGTTGCAGTGGGTCAC...TGACTGCAGAGGAAGTGTTCCTACCTGCAGGAAGGCACCTGTCACACAGGGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR CCA 90 bp TATGCTGTCTATGGTCAGCAGCTAGAACAGCAGTGCACACACAGCAGGTGCTCACACTGCGCCTGGCCTTaGGTTGTTATACTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: YAVYGQQLEQQCTHSRCSHCAWP*VVILGS
Trigger: AGACCCCAGTATAACAACCCAAGGCCAGGCGCAGTG...TGAGCACCTGCTGTGTGTGCACTGCTGTTCTAGCTGCTGACCATAGACAGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR TCA 90 bp ATTGAAGACGATCACCACTCCATGAGCATCCTTCATCAGGGCCGGCCAGCAGGATTGGGATGTCAGCATTaGAGACGATCACCACTCCAT +
Preference number: 4 (lower is better)
Translates to: IEDDHHSMSILHQGRPAGLGCQH*RRSPLH
Trigger: ATGGAGTGGTGATCGTCTTCAATGCTGACATCCCAA...TCCTGCTGGCCGGCCCTGATGAAGGATGCTCATGGAGTGGTGATCGTCTTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
CDS-3UTR TCA 90 bp AGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTGGTCATCTTCCAGGTTTaGGTGCACCAGCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: RSAPRNMLISLGMWQSQVVIFQV*VHQLQL
Trigger: AAGCTGAAGCTGGTGCACTCAAACCTGGAAGATGAC...CACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp GCTGTTGGACAAAGCAGGAATACCACATCTCCATTTCCTTCCGGTGGCTTGGGACACCGAGAAACATGCTaGTTTCACTGGGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: AVGQSRNTTSPFPSGGLGHRETC*FHWGCG
Trigger: GCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTG...TCCCAAGCCACCGGAAGGAAATGGAGATGTGGTATTCCTGCTTTGTCCAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430911.5
CDS-3UTR TCA 90 bp TCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGAGTGAACGCCCTGTGTaGCAGGTGCCTTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SGAGCDFRSAPRNMLISLSERPV*QVPSCR
Trigger: CCTGCAGGAAGGCACCTGTCACACAGGGCGTTCACT...CAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp GGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACATATGTGAGGTGGAGAGCACAGATGGTCTaGGTGAACGCCCTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: GLRRLQVHKLFNWTYVRWRAQMV*VNALCD
Trigger: GTCACACAGGGCGTTCACTCAGACCATCTGTGCTCT...CCACCTCACATATGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR GCA 90 bp TCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGCGATCTCGGCTCAGTaGAATCTCTGCCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SGAGCDFRSAPRNMLISLAISAQ*NLCLPG
Trigger: GCCTGGGAGGCAGAGATTGCACTGAGCCGAGATCGC...CAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000621899.4
CDS-3UTR GCA 90 bp GGCGGATCACTCAAGGACAGGAGTTCGAGATCAGCTGGGGCAACATGGCAAAACCTCTCTCCAGTAGACTaGTCACACAGCTACATGTCA +
Preference number: 4 (lower is better)
Translates to: GGSLKDRSSRSAGATWQNLSPVD*SHSYMS
Trigger: TGACATGTAGCTGTGTGAGCAGTCTACTGGAGAGAG...GTTTTGCCATGTTGCCCCAGCTGATCTCGAACTCCTGTCCTTGAGTGATCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR CCA 90 bp CAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTCCTCACTCCTTGGGTTaGGCTGTATTCAGTGATGTC +
Preference number: 4 (lower is better)
Translates to: QICTEKHADFTGDVAVPGPHSLG*AVFSDV
Trigger: GACATCACTGAATACAGCCCAACCCAAGGAGTGAGG...ACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000517481.5
CDS-3UTR TCA 90 bp GCAGTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACACGATCACCACTCCATaGGCATCCTTCATCAGGGCC +
Preference number: 4 (lower is better)
Translates to: AVRGRRKHQELDVISDLHTITTP*ASFIRA
Trigger: GGCCCTGATGAAGGATGCTCATGGAGTGGTGATCGT...GTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp GGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGACGATCACCACTCCATaGGCATCCTTCATCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GCDFRSAPRNMLISLGMWTITTP*ASFIRA
Trigger: GGCCCTGATGAAGGATGCTCATGGAGTGGTGATCGT...CCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp ATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTCTGAGTGAACGCACGATCACCACTCCATaGGCATCCTTCATCAGGGCC +
Preference number: 4 (lower is better)
Translates to: IGFSQLNSGQSTDGLSERTITTP*ASFIRA
Trigger: GGCCCTGATGAAGGATGCTCATGGAGTGGTGATCGT...GCGTTCACTCAGACCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp TGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGACGATCACCACTCCATaGGCATCCTTCATCAGGGCC +
Preference number: 4 (lower is better)
Translates to: CDFRSAPRNMLISLGMWQTITTP*ASFIRA
Trigger: GGCCCTGATGAAGGATGCTCATGGAGTGGTGATCGT...CTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp GGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACATATGTGAGGTGGCACCGAGAAACATGCTaGTTTCACTGGGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: GLRRLQVHKLFNWTYVRWHRETC*FHWGCG
Trigger: GCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTG...CCACCTCACATATGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp TACTGTTGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGAGTGAACGCCCTGTGTaGCAGGTGCCTTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: YCCIIGLRRLQVHKLFNWSERPV*QVPSCR
Trigger: CCTGCAGGAAGGCACCTGTCACACAGGGCGTTCACT...CCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACAACAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR GCA 90 bp CAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTTCTTCCAGGTTTGAGTaGACCAGCTTCAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QICTEKHADFTGDVAVPGSSRFE*TSFSLF
Trigger: GAACAAGCTGAAGCTGGTGCACTCAAACCTGGAAGA...ACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp GGCGACAAAGACAGGCTTCCTTTATCATCTCCAGAGCCTGGTTTGTGGTGTGCAAGGATCCTCACTCCTTaGGTTGGGCTGTATTCAGTG +
Preference number: 4 (lower is better)
Translates to: GDKDRLPLSSPEPGLWCARILTP*VGLYSV
Trigger: CACTGAATACAGCCCAACCCAAGGAGTGAGGATCCT...TGCACACCACAAACCAGGCTCTGGAGATGATAAAGGAAGCCTGTCTTTGTCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
CDS-3UTR CCA 90 bp CAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTCCAGAGCCTGGTTTGTaGTGTGCAATTAGCATACAC +
Preference number: 4 (lower is better)
Translates to: QICTEKHADFTGDVAVPGPEPGL*CAISIH
Trigger: GTGTATGCTAATTGCACACCACAAACCAGGCTCTGG...ACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp TCCAGGTTTGAGTGCACCAGCTTCAGCTTGTTCAAGGGTGGCGACAAAGACAGGCCAGAGCCTGGTTTGTaGTGTGCAATTAGCATACAC +
Preference number: 4 (lower is better)
Translates to: SRFECTSFSLFKGGDKDRPEPGL*CAISIH
Trigger: GTGTATGCTAATTGCACACCACAAACCAGGCTCTGG...CCTGTCTTTGTCGCCACCCTTGAACAAGCTGAAGCTGGTGCACTCAAACCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
CDS-3UTR CCA 90 bp AGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTGCCAGAGCCTGGTTTGTaGTGTGCAATTAGCATACAC +
Preference number: 4 (lower is better)
Translates to: RSAPRNMLISLGMWQSQVPEPGL*CAISIH
Trigger: GTGTATGCTAATTGCACACCACAAACCAGGCTCTGG...CACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp GGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACATATGTGAGGTGGCAGCTTGTTCAAGGGTaGCGACAAAGACAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GLRRLQVHKLFNWTYVRWQLVQG*RQRQAS
Trigger: GGAAGCCTGTCTTTGTCGCCACCCTTGAACAAGCTG...CCACCTCACATATGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp TGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGCCACGTTGGTCAGGATaGTCTCGATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: CDFRSAPRNMLISLGMWQPRWSG*SRSPDL
Trigger: GAGGTCAGGAGATCGAGACCATCCTGACCAACGTGG...CTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp GAGGTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAACCATGTTGGCCAGGATaGTCTCGATCTCTGGACCTT +
Preference number: 4 (lower is better)
Translates to: EVVNPSILQVFGKFWGQEPCWPG*SRSLDL
Trigger: AAGGTCCAGAGATCGAGACCATCCTGGCCAACATGG...TTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315322.10
ENST00000621899.4
CDS-3UTR CCA 90 bp TCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGGGCTGCTGTGAGCTGTaGTCATGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: SLHFTGLWEVLGPGNPNLGCCEL*SCHCTP
Trigger: TGGAGTGCAGTGGCATGACCACAGCTCACAGCAGCC...CAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR CCA 90 bp AGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTGTCAAACCTCACTCCTTaGGTTGGGCTGTATTCAGTG +
Preference number: 4 (lower is better)
Translates to: RSAPRNMLISLGMWQSQVSNLTP*VGLYSV
Trigger: CACTGAATACAGCCCAACCCAAGGAGTGAGGTTTGA...CACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437644.2
CDS-3UTR TCA 90 bp TTGTTGTTGCTGGTAACATGCGGGTTCTCAAATTCTAGGATCCTCACTCCTTGGACGATCACCACTCCATaGGCATCCTTCATCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LLLLVTCGFSNSRILTPWTITTP*ASFIRA
Trigger: GGCCCTGATGAAGGATGCTCATGGAGTGGTGATCGT...CCAAGGAGTGAGGATCCTAGAATTTGAGAACCCGCATGTTACCAGCAACAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
CDS-3UTR TCA 90 bp GAGGTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAGTCATCTTCCAGGTTTaGGTGCACCAGCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: EVVNPSILQVFGKFWGQEVIFQV*VHQLQL
Trigger: AAGCTGAAGCTGGTGCACTCAAACCTGGAAGATGAC...TTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp GGCGACAAAGACAGGCTTCCTTTATCATCTCCAGAGCCTGGTTTGTGGTGTGCATGGCTAGGTCATAATTaGCATCTCCTCCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: GDKDRLPLSSPEPGLWCAWLGHN*HLLPVS
Trigger: AGAGACAGGGAGGAGATGTCAATTATGACCTAGCCA...TGCACACCACAAACCAGGCTCTGGAGATGATAAAGGAAGCCTGTCTTTGTCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
CDS-3UTR TCA 90 bp GCAGTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCACCGAGAAACATGCTaGTTTCACTGGGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: AVRGRRKHQELDVISDLHHRETC*FHWGCG
Trigger: GCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTG...GTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp GTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCACCGAGAAACATGCTaGTTTCACTGGGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: VVNPSILQVFGKFWGQEIHRETC*FHWGCG
Trigger: GCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTG...GATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp TGCAGTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCAAGAGCACAGATGGTCTaGGTGAACGCCCTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: CSQREKKTSGAGCDFRSARAQMV*VNALCD
Trigger: GTCACACAGGGCGTTCACTCAGACCATCTGTGCTCT...TGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp GTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGATATGCCTCAGCCACCTaGGTAGCTGGTATTACAGGC +
Preference number: 4 (lower is better)
Translates to: VRGRRKHQELDVISDLHRYASAT*VAGITG
Trigger: GCCTGTAATACCAGCTACTCAGGTGGCTGAGGCATA...TCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000621899.4
CDS-3UTR TCA 90 bp GAGGTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAGGTTCCCTCATTATCTaGGGGAGGGCAGCATATGAA +
Preference number: 4 (lower is better)
Translates to: EVVNPSILQVFGKFWGQEGSLII*GRAAYE
Trigger: TTCATATGCTGCCCTCCCTCAGATAATGAGGGAACC...TTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000621899.4
CDS-3UTR TCA 90 bp GGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACACTGGTCTTGAACTCCTaGCCTCAGGATTTCCACCCG +
Preference number: 4 (lower is better)
Translates to: GRRKHQELDVISDLHRETLVLNS*PQDFHP
Trigger: CGGGTGGAAATCCTGAGGTCAGGAGTTCAAGACCAG...TGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR GCA 90 bp AGTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGCAGCTAGAACAGCAGTaGACACACAGCAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: SQREKKTSGAGCDFRSAPQLEQQ*THSRCS
Trigger: TGAGCACCTGCTGTGTGTGCACTGCTGTTCTAGCTG...CGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR GCA 90 bp CCAAATTTGATAATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTACAGGCGTAAGCCACTaGACCCGGCCTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: PNLIIGFSQLNSGQSTDGTGVSH*TRPPGS
Trigger: TGAGCCTGGAGGCCGGGTGCAGTGGCTTACGCCTGT...ACCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTATTATCAAATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR GCA 90 bp TTACTGGTGTGTGTATCTCTAGTCTCAACTACTCAGAGGCTGAGCTGGCGAGATTTCAAGCGATTCTCCTaGCTCAGCTTCCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: LLVCVSLVSTTQRLSWRDFKRFS*LSFPGS
Trigger: GCTACCTGGGAAGCTGAGGCAGGAGAATCGCTTGAA...ATCTCGCCAGCTCAGCCTCTGAGTAGTTGAGACTAGAGATACACACACCAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR CCA 90 bp CAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTGTCTTTGGGAAGTTCTaGGGCCAGGAAATCCAAATT +
Preference number: 4 (lower is better)
Translates to: QICTEKHADFTGDVAVPGVFGKF*GQEIQI
Trigger: AATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGAC...ACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp TTACTGGTGTGTGTATCTCTAGTCTCAACTACTCAGAGGCTGAGCTGGCGAGATGGGGTTTCACCACGTTaGTCAGGATGGTCTCGATCT +
Preference number: 4 (lower is better)
Translates to: LLVCVSLVSTTQRLSWRDGVSPR*SGWSRS
Trigger: AGATCGAGACCATCCTGACCAACGTGGTGAAACCCC...ATCTCGCCAGCTCAGCCTCTGAGTAGTTGAGACTAGAGATACACACACCAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR CCA 90 bp GTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCGGGGTTTCACCACGTTaGTCAGGATGGTCTCGATCT +
Preference number: 4 (lower is better)
Translates to: VVNPSILQVFGKFWGQEIGVSPR*SGWSRS
Trigger: AGATCGAGACCATCCTGACCAACGTGGTGAAACCCC...GATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000517481.5
ENST00000621899.4
3UTR CAA 72 bp CAGTCCCATAGCTCGAATTCACAGCCCGTGCCTTTGTaGTTGCTGGTAACATGCGGGTTCTCAAATTCTAGG +
Preference number: 4 (lower is better)
Translates to: QSHSSNSQPVPL*LLVTCGFSNSR
Trigger: CCTAGAATTTGAGAACCCGCATGTTACCAGCAACAACAAAGGCACGGGCTGTGAATTCGAGCTATGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
3UTR CAA 72 bp CCACAGTCCCATAGCTCGAATTCACAGCCCGTGCCTTaGTTGTTGCTGGTAACATGCGGGTTCTCAAATTCT +
Preference number: 4 (lower is better)
Translates to: PQSHSSNSQPVP*LLLVTCGFSNS
Trigger: AGAATTTGAGAACCCGCATGTTACCAGCAACAACAAAGGCACGGGCTGTGAATTCGAGCTATGGGACTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
CDS-3UTR TCA 90 bp ATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACATATGTGACGATCACCACTCCATaGGCATCCTTCATCAGGGCC +
Preference number: 4 (lower is better)
Translates to: IIGLRRLQVHKLFNWTYVTITTP*ASFIRA
Trigger: GGCCCTGATGAAGGATGCTCATGGAGTGGTGATCGT...CACATATGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp GATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCTTGGGATGTCAGCATTaGAGACGATCACCACTCCAT +
Preference number: 4 (lower is better)
Translates to: DFRSAPRNMLISLGMWQSLGCQH*RRSPLH
Trigger: ATGGAGTGGTGATCGTCTTCAATGCTGACATCCCAA...GGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp ATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTCTGAGTGAACGCGTCATCTTCCAGGTTTaGGTGCACCAGCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: IGFSQLNSGQSTDGLSERVIFQV*VHQLQL
Trigger: AAGCTGAAGCTGGTGCACTCAAACCTGGAAGATGAC...GCGTTCACTCAGACCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp GCAGTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACGTCATCTTCCAGGTTTaGGTGCACCAGCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: AVRGRRKHQELDVISDLHVIFQV*VHQLQL
Trigger: AAGCTGAAGCTGGTGCACTCAAACCTGGAAGATGAC...GTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp GTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCGTCATCTTCCAGGTTTaGGTGCACCAGCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: VVNPSILQVFGKFWGQEIVIFQV*VHQLQL
Trigger: AAGCTGAAGCTGGTGCACTCAAACCTGGAAGATGAC...GATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp TGTTGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACAAGAGCACAGATGGTCTaGGTGAACGCCCTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: CCIIGLRRLQVHKLFNWTRAQMV*VNALCD
Trigger: GTCACACAGGGCGTTCACTCAGACCATCTGTGCTCT...TGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp TCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGTGGACAGGCTGGTCTTaGACTCCTGACCTCAGGATT +
Preference number: 4 (lower is better)
Translates to: SGAGCDFRSAPRNMLISLWTGWS*TPDLRI
Trigger: AATCCTGAGGTCAGGAGTTCAAGACCAGCCTGTCCA...CAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR GCA 90 bp TCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGCAGCTAGAACAGCAGTaGACACACAGCAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: SLHFTGLWEVLGPGNPNLQLEQQ*THSRCS
Trigger: TGAGCACCTGCTGTGTGTGCACTGCTGTTCTAGCTG...CAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR GCA 90 bp CCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGATAATGCGATCTCGGCTCAGTaGAATCTCTGCCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PFYRSLGSSGARKSKFDNAISAQ*NLCLPG
Trigger: GCCTGGGAGGCAGAGATTGCACTGAGCCGAGATCGC...ATTATCAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000621899.4
CDS-3UTR CCA 90 bp GTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCTCCATTTCCTTCCGGTaGCTTGGGATGTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: VVNPSILQVFGKFWGQEISISFR*LGMSAL
Trigger: CAATGCTGACATCCCAAGCCACCGGAAGGAAATGGA...GATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp TCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGCAGCTTGTTCAAGGGTaGCGACAAAGACAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SGAGCDFRSAPRNMLISLQLVQG*RQRQAS
Trigger: GGAAGCCTGTCTTTGTCGCCACCCTTGAACAAGCTG...CAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp TCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGCAAGCTGGAGTACAGTaGCGCAATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SGAGCDFRSAPRNMLISLQAGVQ*RNLGSL
Trigger: CAGTGAGCCAAGATTGCGCCACTGTACTCCAGCTTG...CAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp TCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGAGCTTCCCAGGTAGCTaGGATTACAGGCACGTGCTA +
Preference number: 4 (lower is better)
Translates to: SGAGCDFRSAPRNMLISLSFPGS*DYRHVL
Trigger: TAGCACGTGCCTGTAATCCCAGCTACCTGGGAAGCT...CAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR CCA 90 bp TTTGATAATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTCTGAGCTATGTTGCCGAGGCTaGAGAGCAGTGGCGCGATCT +
Preference number: 4 (lower is better)
Translates to: FDNRIFSTELRAEHRWSELCCRG*RAVARS
Trigger: AGATCGCGCCACTGCTCTCCAGCCTCGGCAACATAG...CTCAGACCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTATTATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315322.10
3UTR CAA 72 bp TCCCATAGCTCGAATTCACAGCCCGTGCCTTTGTTGTaGCTGGTAACATGCGGGTTCTCAAATTCTAGGATC +
Preference number: 4 (lower is better)
Translates to: SHSSNSQPVPLL*LVTCGFSNSRI
Trigger: GATCCTAGAATTTGAGAACCCGCATGTTACCAGCAACAACAAAGGCACGGGCTGTGAATTCGAGCTATGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
CDS-3UTR TCA 90 bp GTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGATTGGGATGTCAGCATTaGAGACGATCACCACTCCAT +
Preference number: 4 (lower is better)
Translates to: VRGRRKHQELDVISDLHRLGCQH*RRSPLH
Trigger: ATGGAGTGGTGATCGTCTTCAATGCTGACATCCCAA...TCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp GTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGATGGCTAGGTCATAATTaGCATCTCCTCCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: VRGRRKHQELDVISDLHRWLGHN*HLLPVS
Trigger: AGAGACAGGGAGGAGATGTCAATTATGACCTAGCCA...TCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp ATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACATATGTGCACCGAGAAACATGCTaGTTTCACTGGGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: IIGLRRLQVHKLFNWTYVHRETC*FHWGCG
Trigger: GCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTG...CACATATGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp TACTGTTGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGCACCGAGAAACATGCTaGTTTCACTGGGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: YCCIIGLRRLQVHKLFNWHRETC*FHWGCG
Trigger: GCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTG...CCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACAACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp AAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTAGAGCACAGATGGTCTaGGTGAACGCCCTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: KTSGAGCDFRSAPRNMLIRAQMV*VNALCD
Trigger: GTCACACAGGGCGTTCACTCAGACCATCTGTGCTCT...AATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp CAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTAGGGAGGGCAGCATATaGAACTTATTTAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: QICTEKHADFTGDVAVPGREGSI*NLFRLL
Trigger: AAGAAGTCTAAATAAGTTTCATATGCTGCCCTCCCT...ACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000621899.4
CDS-3UTR TCA 90 bp TGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACATATAGATTGAGGCTGCTGTaGGCTGTGGTCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: CIIGLRRLQVHKLFNWTYRLRLL*AVVMPL
Trigger: CAGTGGCATGACCACAGCTCACAGCAGCCTCAATCT...ATATGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR GCA 90 bp GGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAGTTGTATCATTGGGCTaGGACGGTTACAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: GKSLHFTGLWEVLGPGNPVVSLG*DGYKST
Trigger: TGTGGACTTGTAACCGTCGCAGCCCAATGATACAAC...TGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp TCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGCCTCACTCCTTGGGTTaGGCTGTATTCAGTGATGTC +
Preference number: 4 (lower is better)
Translates to: SGAGCDFRSAPRNMLISLPHSLG*AVFSDV
Trigger: GACATCACTGAATACAGCCCAACCCAAGGAGTGAGG...CAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000517481.5
CDS-3UTR CCA 90 bp TGCAGTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCAAGGATCCTCACTCCTTaGGTTGGGCTGTATTCAGTG +
Preference number: 4 (lower is better)
Translates to: CSQREKKTSGAGCDFRSARILTP*VGLYSV
Trigger: CACTGAATACAGCCCAACCCAAGGAGTGAGGATCCT...TGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000517481.5
CDS-3UTR CCA 90 bp TTACTGGTGTGTGTATCTCTAGTCTCAACTACTCAGAGGCTGAGCTGGCGAGATCCAGAGCCTGGTTTGTaGTGTGCAATTAGCATACAC +
Preference number: 4 (lower is better)
Translates to: LLVCVSLVSTTQRLSWRDPEPGL*CAISIH
Trigger: GTGTATGCTAATTGCACACCACAAACCAGGCTCTGG...ATCTCGCCAGCTCAGCCTCTGAGTAGTTGAGACTAGAGATACACACACCAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR CCA 90 bp GTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGACCAGAGCCTGGTTTGTaGTGTGCAATTAGCATACAC +
Preference number: 4 (lower is better)
Translates to: VRGRRKHQELDVISDLHRPEPGL*CAISIH
Trigger: GTGTATGCTAATTGCACACCACAAACCAGGCTCTGG...TCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp ATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTCTGAGTGAACGCCCAGAGCCTGGTTTGTaGTGTGCAATTAGCATACAC +
Preference number: 4 (lower is better)
Translates to: IGFSQLNSGQSTDGLSERPEPGL*CAISIH
Trigger: GTGTATGCTAATTGCACACCACAAACCAGGCTCTGG...GCGTTCACTCAGACCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp AGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCCAGCTTGTTCAAGGGTaGCGACAAAGACAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RRKHQELDVISDLHRETCQLVQG*RQRQAS
Trigger: GGAAGCCTGTCTTTGTCGCCACCCTTGAACAAGCTG...GCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp GATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCGTCTTTGGGAAGTTCTaGGGCCAGGAAATCCAAATT +
Preference number: 4 (lower is better)
Translates to: DFRSAPRNMLISLGMWQSVFGKF*GQEIQI
Trigger: AATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGAC...GGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp ATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTCAAGCTGGAGTACAGTaGCGCAATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IPPFYRSLGSSGARKSKFQAGVQ*RNLGSL
Trigger: CAGTGAGCCAAGATTGCGCCACTGTACTCCAGCTTG...AAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp TGTTGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACACAGGCTGGAGTGCAATaGCACAATCTCGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: CCIIGLRRLQVHKLFNWTQAGVQ*HNLGLL
Trigger: CAGTAAGCCGAGATTGTGCCATTGCACTCCAGCCTG...TGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR TCA 90 bp TGCAGTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCATTGGGATGTCAGCATTaGAGACGATCACCACTCCAT +
Preference number: 4 (lower is better)
Translates to: CSQREKKTSGAGCDFRSALGCQH*RRSPLH
Trigger: ATGGAGTGGTGATCGTCTTCAATGCTGACATCCCAA...TGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp GGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGGCTAGGTCATAATTaGCATCTCCTCCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: GRRKHQELDVISDLHRETWLGHN*HLLPVS
Trigger: AGAGACAGGGAGGAGATGTCAATTATGACCTAGCCA...TGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp TGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACATATCACCGAGAAACATGCTaGTTTCACTGGGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: CIIGLRRLQVHKLFNWTYHRETC*FHWGCG
Trigger: GCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTG...ATATGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp AGTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGTTGCACTCAAGTTTCTaGATCGGCCTATTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SQREKKTSGAGCDFRSAPLHSSF*IGLLGW
Trigger: CCAACCTAATAGGCCGATTCAGAAACTTGAGTGCAA...CGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp TGTTGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACAGGTTCCCTCATTATCTaGGGGAGGGCAGCATATGAA +
Preference number: 4 (lower is better)
Translates to: CCIIGLRRLQVHKLFNWTGSLII*GRAAYE
Trigger: TTCATATGCTGCCCTCCCTCAGATAATGAGGGAACC...TGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000621899.4
CDS-3UTR GCA 90 bp TTGTTGTTGCTGGTAACATGCGGGTTCTCAAATTCTAGGATCCTCACTCCTTGGTCTTCCAGGTTTGAGTaGACCAGCTTCAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LLLLVTCGFSNSRILTPWSSRFE*TSFSLF
Trigger: GAACAAGCTGAAGCTGGTGCACTCAAACCTGGAAGA...CCAAGGAGTGAGGATCCTAGAATTTGAGAACCCGCATGTTACCAGCAACAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
CDS-3UTR GCA 90 bp AAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTCAGCTAGAACAGCAGTaGACACACAGCAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: KTSGAGCDFRSAPRNMLIQLEQQ*THSRCS
Trigger: TGAGCACCTGCTGTGTGTGCACTGCTGTTCTAGCTG...AATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp TACTGTTGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGCCTCACTCCTTGGGTTaGGCTGTATTCAGTGATGTC +
Preference number: 4 (lower is better)
Translates to: YCCIIGLRRLQVHKLFNWPHSLG*AVFSDV
Trigger: GACATCACTGAATACAGCCCAACCCAAGGAGTGAGG...CCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACAACAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000517481.5
CDS-3UTR CCA 90 bp AGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTCCATTTCCTTCCGGTaGCTTGGGATGTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: RRKHQELDVISDLHRETCSISFR*LGMSAL
Trigger: CAATGCTGACATCCCAAGCCACCGGAAGGAAATGGA...GCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp ATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACATATGTGTCCATTTCCTTCCGGTaGCTTGGGATGTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: IIGLRRLQVHKLFNWTYVSISFR*LGMSAL
Trigger: CAATGCTGACATCCCAAGCCACCGGAAGGAAATGGA...CACATATGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp TGCAGTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCAGAGCCTGGTTTGTaGTGTGCAATTAGCATACAC +
Preference number: 4 (lower is better)
Translates to: CSQREKKTSGAGCDFRSAPEPGL*CAISIH
Trigger: GTGTATGCTAATTGCACACCACAAACCAGGCTCTGG...TGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp GTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCGTCTTTGGGAAGTTCTaGGGCCAGGAAATCCAAATT +
Preference number: 4 (lower is better)
Translates to: VVNPSILQVFGKFWGQEIVFGKF*GQEIQI
Trigger: AATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGAC...GATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp GAATTCACAGCCCGTGCCTTTGTTGTTGCTGGTAACATGCGGGTTCTCAAATTCGTCTTTGGGAAGTTCTaGGGCCAGGAAATCCAAATT +
Preference number: 4 (lower is better)
Translates to: EFTARAFVVAGNMRVLKFVFGKF*GQEIQI
Trigger: AATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGAC...GAATTTGAGAACCCGCATGTTACCAGCAACAACAAAGGCACGGGCTGTGAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
CDS-3UTR CCA 90 bp TTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTTATGCTGTCTATGGTCAGCACCACGTTGGTCAGGATaGTCTCGATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: FHEGGNFCLFHLCCLWSAPRWSG*SRSPDL
Trigger: GAGGTCAGGAGATCGAGACCATCCTGACCAACGTGG...TGCTGACCATAGACAGCATAAATGAAAAAGACAGAAATTCCCACCTTCGTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp ATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTCTGAGTGAACGCTTTAGAGGTTGTGTATaGGCTGGGCACAATGACTCA +
Preference number: 4 (lower is better)
Translates to: IGFSQLNSGQSTDGLSERFRGCV*AGHNDS
Trigger: TGAGTCATTGTGCCCAGCCCATACACAACCTCTAAA...GCGTTCACTCAGACCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315322.10
3UTR CAA 72 bp TGCACACACAGCAGGTGCTCAGCCAGTCGGTATTTGTaGGGTGAATCAAGGAATGAAAATCACATTCAAGCC +
Preference number: 4 (lower is better)
Translates to: CTHSRCSASRYL*GESRNENHIQA
Trigger: GGCTTGAATGTGATTTTCATTCCTTGATTCACCCAACAAATACCGACTGGCTGAGCACCTGCTGTGTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp TGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTTGGGCTGTATTCAGTaGTGTCAGAAGATTCTGTCA +
Preference number: 4 (lower is better)
Translates to: CDFRSAPRNMLISLGMWQLGCIQ*CQKILS
Trigger: TGACAGAATCTTCTGACATCACTGAATACAGCCCAA...CTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000517481.5
CDS-3UTR TCA 90 bp TGTTGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACATGGCTAGGTCATAATTaGCATCTCCTCCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: CCIIGLRRLQVHKLFNWTWLGHN*HLLPVS
Trigger: AGAGACAGGGAGGAGATGTCAATTATGACCTAGCCA...TGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp TACTGTTGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGTGGCTAGGTCATAATTaGCATCTCCTCCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: YCCIIGLRRLQVHKLFNWWLGHN*HLLPVS
Trigger: AGAGACAGGGAGGAGATGTCAATTATGACCTAGCCA...CCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACAACAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp TTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTTATGCTGTCTATGGTCAGCATATGCCTCAGCCACCTaGGTAGCTGGTATTACAGGC +
Preference number: 4 (lower is better)
Translates to: FHEGGNFCLFHLCCLWSAYASAT*VAGITG
Trigger: GCCTGTAATACCAGCTACTCAGGTGGCTGAGGCATA...TGCTGACCATAGACAGCATAAATGAAAAAGACAGAAATTCCCACCTTCGTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000621899.4
CDS-3UTR GCA 90 bp TACTGTTGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGTCTTCCAGGTTTGAGTaGACCAGCTTCAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: YCCIIGLRRLQVHKLFNWSSRFE*TSFSLF
Trigger: GAACAAGCTGAAGCTGGTGCACTCAAACCTGGAAGA...CCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACAACAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR GCA 90 bp ATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGTTGTATCATTGGGCTaGGACGGTTACAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: IPPFYRSLGSSGARKSKFVVSLG*DGYKST
Trigger: TGTGGACTTGTAACCGTCGCAGCCCAATGATACAAC...AAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp TTTGATAATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTCTGAGCCTCACTCCTTGGGTTaGGCTGTATTCAGTGATGTC +
Preference number: 4 (lower is better)
Translates to: FDNRIFSTELRAEHRWSEPHSLG*AVFSDV
Trigger: GACATCACTGAATACAGCCCAACCCAAGGAGTGAGG...CTCAGACCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTATTATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000517481.5
CDS-3UTR CCA 90 bp AAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCCATTTCCTTCCGGTaGCTTGGGATGTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: KTSGAGCDFRSAPRNMLISISFR*LGMSAL
Trigger: CAATGCTGACATCCCAAGCCACCGGAAGGAAATGGA...AATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp CCAAATTTGATAATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTCAGCTTGTTCAAGGGTaGCGACAAAGACAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PNLIIGFSQLNSGQSTDGQLVQG*RQRQAS
Trigger: GGAAGCCTGTCTTTGTCGCCACCCTTGAACAAGCTG...ACCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTATTATCAAATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp TCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGCTACTGTTGTATCATTaGGCTGCGACGGTTACAAGT +
Preference number: 4 (lower is better)
Translates to: SGAGCDFRSAPRNMLISLLLLYH*AATVTS
Trigger: ACTTGTAACCGTCGCAGCCCAATGATACAACAGTAG...CAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp CAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTGCCACAGTATTGATTTaGGGGTTACAAACATATTTT +
Preference number: 4 (lower is better)
Translates to: QICTEKHADFTGDVAVPGATVLI*GLQTYF
Trigger: AAAATATGTTTGTAACCCCCAAATCAATACTGTGGC...ACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315322.10
ENST00000621899.4
CDS-3UTR CCA 90 bp GGATCAAGTATACGTTCATTTGGCATTTTAAGTACCCCAGGTTCCCTCATTATCGAGTTCGAGATCAGCTaGGGCAACATGGCAAAACCC +
Preference number: 4 (lower is better)
Translates to: GSSIRSFGILSTPGSLIIEFEIS*GNMAKP
Trigger: GGGTTTTGCCATGTTGCCCCAGCTGATCTCGAACTC...GATAATGAGGGAACCTGGGGTACTTAAAATGCCAAATGAACGTATACTTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315322.10
3UTR CAA 72 bp CAGTGCACACACAGCAGGTGCTCAGCCAGTCGGTATTaGTTGGGTGAATCAAGGAATGAAAATCACATTCAA +
Preference number: 4 (lower is better)
Translates to: QCTHSRCSASRY*LGESRNENHIQ
Trigger: TTGAATGTGATTTTCATTCCTTGATTCACCCAACAAATACCGACTGGCTGAGCACCTGCTGTGTGTGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
3UTR CAA 72 bp AAAGACAGGCTTCCTTTATCATCTCCAGAGCCTGGTTaGTGGTGTGCAATTAGCATACACTGTGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: KDRLPLSSPEPG*WCAISIHCVSC
Trigger: ACAGGACACACAGTGTATGCTAATTGCACACCACAAACCAGGCTCTGGAGATGATAAAGGAAGCCTGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
CDS-3UTR TCA 90 bp TCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGTTGGGCTGTATTCAGTaGTGTCAGAAGATTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SLHFTGLWEVLGPGNPNLLGCIQ*CQKILS
Trigger: TGACAGAATCTTCTGACATCACTGAATACAGCCCAA...CAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000517481.5
CDS-3UTR TCA 90 bp GGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATTGGGCTGTATTCAGTaGTGTCAGAAGATTCTGTCA +
Preference number: 4 (lower is better)
Translates to: GRRKHQELDVISDLHRETLGCIQ*CQKILS
Trigger: TGACAGAATCTTCTGACATCACTGAATACAGCCCAA...TGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000517481.5
CDS-3UTR TCA 90 bp AAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTTGGGATGTCAGCATTaGAGACGATCACCACTCCAT +
Preference number: 4 (lower is better)
Translates to: KTSGAGCDFRSAPRNMLILGCQH*RRSPLH
Trigger: ATGGAGTGGTGATCGTCTTCAATGCTGACATCCCAA...AATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp TGTTGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACATTGCACTCAAGTTTCTaGATCGGCCTATTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: CCIIGLRRLQVHKLFNWTLHSSF*IGLLGW
Trigger: CCAACCTAATAGGCCGATTCAGAAACTTGAGTGCAA...TGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp CTAACATTTAGGAAAATGGAGAGTTCCACGAAGGTGGGAATTTCTGTCTTTTTCTATGCCTCAGCCACCTaGGTAGCTGGTATTACAGGC +
Preference number: 4 (lower is better)
Translates to: LTFRKMESSTKVGISVFFYASAT*VAGITG
Trigger: GCCTGTAATACCAGCTACTCAGGTGGCTGAGGCATA...GAAAAAGACAGAAATTCCCACCTTCGTGGAACTCTCCATTTTCCTAAATGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000621899.4
CDS-3UTR TCA 90 bp CCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGATAATGGTTCCCTCATTATCTaGGGGAGGGCAGCATATGAA +
Preference number: 4 (lower is better)
Translates to: PFYRSLGSSGARKSKFDNGSLII*GRAAYE
Trigger: TTCATATGCTGCCCTCCCTCAGATAATGAGGGAACC...ATTATCAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000621899.4
CDS-3UTR TCA 90 bp CATTTAGGAAAATGGAGAGTTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTTCCTCCCTCAGCTTCCTaGGTAGCTGGGATTACAGGT +
Preference number: 4 (lower is better)
Translates to: HLGKWRVPRRWEFLSFSFPPSAS*VAGITG
Trigger: ACCTGTAATCCCAGCTACTCAGGAAGCTGAGGGAGG...AAATGAAAAAGACAGAAATTCCCACCTTCGTGGAACTCTCCATTTTCCTAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR GCA 90 bp CTAACATTTAGGAAAATGGAGAGTTCCACGAAGGTGGGAATTTCTGTCTTTTTCCAGCTAGAACAGCAGTaGACACACAGCAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: LTFRKMESSTKVGISVFFQLEQQ*THSRCS
Trigger: TGAGCACCTGCTGTGTGTGCACTGCTGTTCTAGCTG...GAAAAAGACAGAAATTCCCACCTTCGTGGAACTCTCCATTTTCCTAAATGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR GCA 90 bp GAGGTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAATGTCTTTTTCATTTATaGTGTCTATGGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: EVVNPSILQVFGKFWGQECLFHL*CLWSAA
Trigger: AGCTGCTGACCATAGACAGCATAAATGAAAAAGACA...TTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR GCA 90 bp TGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGGCATATCCAAGACATTaGACTCAAGTTTCTGAATCG +
Preference number: 4 (lower is better)
Translates to: CDFRSAPRNMLISLGMWQAYPRH*TQVSES
Trigger: CGATTCAGAAACTTGAGTGCAATGTCTTGGATATGC...CTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR GCA 90 bp TACTGTTGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGAGGCATGCCCCACCATaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: YCCIIGLRRLQVHKLFNWRHAPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGGTGGGGCATGCCT...CCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACAACAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315322.10
ENST00000621899.4
CDS-3UTR GCA 90 bp ATACACGTGATTAAACTACTGTTGTATCATTGGGCTGCGACGGTTACAAGTCCAGGTATTACAGGTGTGTaGCAACATGCCTGGCGAATT +
Preference number: 4 (lower is better)
Translates to: IHVIKLLLYHWAATVTSPGITGV*QHAWRI
Trigger: AATTCGCCAGGCATGTTGGCACACACCTGTAATACC...TGGACTTGTAACCGTCGCAGCCCAATGATACAACAGTAGTTTAATCACGTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR GCA 90 bp TGTTGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACATTCATCTCCCTTAGGTaGCTCAACTTTTTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: CCIIGLRRLQVHKLFNWTFISLR*LNFFSH
Trigger: GTGGGAGAAAAAGTTGAGGCACCTAAGGGAGATGAA...TGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR CCA 90 bp CCAAATTTGATAATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTCCTCACTCCTTGGGTTaGGCTGTATTCAGTGATGTC +
Preference number: 4 (lower is better)
Translates to: PNLIIGFSQLNSGQSTDGPHSLG*AVFSDV
Trigger: GACATCACTGAATACAGCCCAACCCAAGGAGTGAGG...ACCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTATTATCAAATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000517481.5
CDS-3UTR CCA 90 bp TCCAAATTTGATAATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGAGGATCCTCACTCCTTaGGTTGGGCTGTATTCAGTG +
Preference number: 4 (lower is better)
Translates to: SKFDNRIFSTELRAEHRWRILTP*VGLYSV
Trigger: CACTGAATACAGCCCAACCCAAGGAGTGAGGATCCT...CCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTATTATCAAATTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000517481.5
CDS-3UTR CCA 90 bp TTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTTATGCTGTCTATGGTCAGCATCCATTTCCTTCCGGTaGCTTGGGATGTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: FHEGGNFCLFHLCCLWSASISFR*LGMSAL
Trigger: CAATGCTGACATCCCAAGCCACCGGAAGGAAATGGA...TGCTGACCATAGACAGCATAAATGAAAAAGACAGAAATTCCCACCTTCGTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp CCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGATAATTCCATTTCCTTCCGGTaGCTTGGGATGTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: PFYRSLGSSGARKSKFDNSISFR*LGMSAL
Trigger: CAATGCTGACATCCCAAGCCACCGGAAGGAAATGGA...ATTATCAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp ATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTCTACTGTTGTATCATTaGGCTGCGACGGTTACAAGT +
Preference number: 4 (lower is better)
Translates to: IPPFYRSLGSSGARKSKFLLLYH*AATVTS
Trigger: ACTTGTAACCGTCGCAGCCCAATGATACAACAGTAG...AAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp GGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGAGAGTTCCACGAAGGTaGGAATTTCTGTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: GCDFRSAPRNMLISLGMWRVPRR*EFLSFS
Trigger: TGAAAAAGACAGAAATTCCCACCTTCGTGGAACTCT...CCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp GTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCAGAGTTCCACGAAGGTaGGAATTTCTGTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: VVNPSILQVFGKFWGQEIRVPRR*EFLSFS
Trigger: TGAAAAAGACAGAAATTCCCACCTTCGTGGAACTCT...GATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp CTAACATTTAGGAAAATGGAGAGTTCCACGAAGGTGGGAATTTCTGTCTTTTTCGGGGTTTCACCACGTTaGTCAGGATGGTCTCGATCT +
Preference number: 4 (lower is better)
Translates to: LTFRKMESSTKVGISVFFGVSPR*SGWSRS
Trigger: AGATCGAGACCATCCTGACCAACGTGGTGAAACCCC...GAAAAAGACAGAAATTCCCACCTTCGTGGAACTCTCCATTTTCCTAAATGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp ATTTGTTGGGTGAATCAAGGAATGAAAATCACATTCAAGCCAATACACGTGATTCCTCCGGGCAGTGGTTaGAATCAAGGTCTCGCAAGG +
Preference number: 4 (lower is better)
Translates to: ICWVNQGMKITFKPIHVIPPGSG*NQGLAR
Trigger: CCTTGCGAGACCTTGATTCCAACCACTGCCCGGAGG...AATCACGTGTATTGGCTTGAATGTGATTTTCATTCCTTGATTCACCCAACAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517481.5
CDS-3UTR TCA 90 bp TGTTGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACATTGGGCTGTATTCAGTaGTGTCAGAAGATTCTGTCA +
Preference number: 4 (lower is better)
Translates to: CCIIGLRRLQVHKLFNWTLGCIQ*CQKILS
Trigger: TGACAGAATCTTCTGACATCACTGAATACAGCCCAA...TGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000517481.5
CDS-3UTR TCA 90 bp CCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGATAATTTGGGATGTCAGCATTaGAGACGATCACCACTCCAT +
Preference number: 4 (lower is better)
Translates to: PFYRSLGSSGARKSKFDNLGCQH*RRSPLH
Trigger: ATGGAGTGGTGATCGTCTTCAATGCTGACATCCCAA...ATTATCAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp CCAAATTTGATAATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTTTGGGATGTCAGCATTaGAGACGATCACCACTCCAT +
Preference number: 4 (lower is better)
Translates to: PNLIIGFSQLNSGQSTDGLGCQH*RRSPLH
Trigger: ATGGAGTGGTGATCGTCTTCAATGCTGACATCCCAA...ACCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTATTATCAAATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp CATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGATAATAGTCATCTTCCAGGTTTaGGTGCACCAGCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: HFTGLWEVLGPGNPNLIIVIFQV*VHQLQL
Trigger: AAGCTGAAGCTGGTGCACTCAAACCTGGAAGATGAC...TATTATCAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp CCAAATTTGATAATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTTGGCTAGGTCATAATTaGCATCTCCTCCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: PNLIIGFSQLNSGQSTDGWLGHN*HLLPVS
Trigger: AGAGACAGGGAGGAGATGTCAATTATGACCTAGCCA...ACCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTATTATCAAATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp ATTTGTTGGGTGAATCAAGGAATGAAAATCACATTCAAGCCAATACACGTGATTAGAGCACAGATGGTCTaGGTGAACGCCCTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: ICWVNQGMKITFKPIHVIRAQMV*VNALCD
Trigger: GTCACACAGGGCGTTCACTCAGACCATCTGTGCTCT...AATCACGTGTATTGGCTTGAATGTGATTTTCATTCCTTGATTCACCCAACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp TCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGAAAGTGCCACAGTATTaGTTTGGGGGTTACAAACAT +
Preference number: 4 (lower is better)
Translates to: SLHFTGLWEVLGPGNPNLKVPQY*FGGYKH
Trigger: ATGTTTGTAACCCCCAAATCAATACTGTGGCACTTT...CAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315322.10
ENST00000621899.4
CDS-3UTR TCA 90 bp GGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACAAAAGTGCCACAGTATTaGTTTGGGGGTTACAAACAT +
Preference number: 4 (lower is better)
Translates to: GRRKHQELDVISDLHRETKVPQY*FGGYKH
Trigger: ATGTTTGTAACCCCCAAATCAATACTGTGGCACTTT...TGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315322.10
ENST00000621899.4
CDS-3UTR GCA 90 bp CCAAATTTGATAATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTTCTTCCAGGTTTGAGTaGACCAGCTTCAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: PNLIIGFSQLNSGQSTDGSSRFE*TSFSLF
Trigger: GAACAAGCTGAAGCTGGTGCACTCAAACCTGGAAGA...ACCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTATTATCAAATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR GCA 90 bp TCCAAATTTGATAATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGGTTGTATCATTGGGCTaGGACGGTTACAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: SKFDNRIFSTELRAEHRWVVSLG*DGYKST
Trigger: TGTGGACTTGTAACCGTCGCAGCCCAATGATACAAC...CCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTATTATCAAATTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR GCA 90 bp GGATCAAGTATACGTTCATTTGGCATTTTAAGTACCCCAGGTTCCCTCATTATCGTTGTATCATTGGGCTaGGACGGTTACAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: GSSIRSFGILSTPGSLIIVVSLG*DGYKST
Trigger: TGTGGACTTGTAACCGTCGCAGCCCAATGATACAAC...GATAATGAGGGAACCTGGGGTACTTAAAATGCCAAATGAACGTATACTTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000621899.4
CDS-3UTR GCA 90 bp GGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCATGTCTTTTTCATTTATaGTGTCTATGGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GKSLHFTGLWEVLGPGNPCLFHL*CLWSAA
Trigger: AGCTGCTGACCATAGACAGCATAAATGAAAAAGACA...TGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR GCA 90 bp TGCAGTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCAGCATATCCAAGACATTaGACTCAAGTTTCTGAATCG +
Preference number: 4 (lower is better)
Translates to: CSQREKKTSGAGCDFRSAAYPRH*TQVSES
Trigger: CGATTCAGAAACTTGAGTGCAATGTCTTGGATATGC...TGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp TGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGAAGTATACGTTCATTTaGCATTTTAAGTACCCCAGG +
Preference number: 4 (lower is better)
Translates to: CDFRSAPRNMLISLGMWQKYTFI*HFKYPR
Trigger: CCTGGGGTACTTAAAATGCCAAATGAACGTATACTT...CTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000621899.4
CDS-3UTR CCA 90 bp GTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGAAAGTATACGTTCATTTaGCATTTTAAGTACCCCAGG +
Preference number: 4 (lower is better)
Translates to: VRGRRKHQELDVISDLHRKYTFI*HFKYPR
Trigger: CCTGGGGTACTTAAAATGCCAAATGAACGTATACTT...TCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000621899.4
CDS-3UTR CCA 90 bp GAGGTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAGCCACAGTATTGATTTaGGGGTTACAAACATATTTT +
Preference number: 4 (lower is better)
Translates to: EVVNPSILQVFGKFWGQEATVLI*GLQTYF
Trigger: AAAATATGTTTGTAACCCCCAAATCAATACTGTGGC...TTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315322.10
ENST00000621899.4
CDS-3UTR CCA 90 bp GGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAGTGTGCCAACATGCCTaGCGAATTTTTGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: GKSLHFTGLWEVLGPGNPVCQHA*RIFVFL
Trigger: TAAAAATACAAAAATTCGCCAGGCATGTTGGCACAC...TGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR TCA 90 bp TCCAAATTTGATAATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTTGCACTCAAGTTTCTaGATCGGCCTATTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SKFDNRIFSTELRAEHRWLHSSF*IGLLGW
Trigger: CCAACCTAATAGGCCGATTCAGAAACTTGAGTGCAA...CCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTATTATCAAATTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR GCA 90 bp CATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGATAATAGTTGTATCATTGGGCTaGGACGGTTACAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: HFTGLWEVLGPGNPNLIIVVSLG*DGYKST
Trigger: TGTGGACTTGTAACCGTCGCAGCCCAATGATACAAC...TATTATCAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR GCA 90 bp TCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGTGTCTTTTTCATTTATaGTGTCTATGGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SLHFTGLWEVLGPGNPNLCLFHL*CLWSAA
Trigger: AGCTGCTGACCATAGACAGCATAAATGAAAAAGACA...CAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR GCA 90 bp TGCAGTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCATGTCTTTTTCATTTATaGTGTCTATGGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CSQREKKTSGAGCDFRSACLFHL*CLWSAA
Trigger: AGCTGCTGACCATAGACAGCATAAATGAAAAAGACA...TGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGACTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR GCA 90 bp TTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTTATGCTGTCTATGGTCAGCAAGGCATGCCCCACCATaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: FHEGGNFCLFHLCCLWSARHAPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGGTGGGGCATGCCT...TGCTGACCATAGACAGCATAAATGAAAAAGACAGAAATTCCCACCTTCGTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315322.10
ENST00000621899.4
CDS-3UTR CCA 90 bp ACATTTAGGAAAATGGAGAGTTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTTCCATTTCCTTCCGGTaGCTTGGGATGTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: TFRKMESSTKVGISVFFISISFR*LGMSAL
Trigger: CAATGCTGACATCCCAAGCCACCGGAAGGAAATGGA...AATGAAAAAGACAGAAATTCCCACCTTCGTGGAACTCTCCATTTTCCTAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp CCAAATTTGATAATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTCTACTGTTGTATCATTaGGCTGCGACGGTTACAAGT +
Preference number: 4 (lower is better)
Translates to: PNLIIGFSQLNSGQSTDGLLLYH*AATVTS
Trigger: ACTTGTAACCGTCGCAGCCCAATGATACAACAGTAG...ACCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTATTATCAAATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp GGATCAAGTATACGTTCATTTGGCATTTTAAGTACCCCAGGTTCCCTCATTATCCTACTGTTGTATCATTaGGCTGCGACGGTTACAAGT +
Preference number: 4 (lower is better)
Translates to: GSSIRSFGILSTPGSLIILLLYH*AATVTS
Trigger: ACTTGTAACCGTCGCAGCCCAATGATACAACAGTAG...GATAATGAGGGAACCTGGGGTACTTAAAATGCCAAATGAACGTATACTTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000621899.4
CDS-3UTR CCA 90 bp ATTTGTTGGGTGAATCAAGGAATGAAAATCACATTCAAGCCAATACACGTGATTCCATGTTGGCCAGGATaGTCTCGATCTCTGGACCTT +
Preference number: 4 (lower is better)
Translates to: ICWVNQGMKITFKPIHVIPCWPG*SRSLDL
Trigger: AAGGTCCAGAGATCGAGACCATCCTGGCCAACATGG...AATCACGTGTATTGGCTTGAATGTGATTTTCATTCCTTGATTCACCCAACAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315322.10
ENST00000621899.4
CDS-3UTR TCA 90 bp AAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTAGGGAGGGCAGCATATaGAACTTATTTAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: KTSGAGCDFRSAPRNMLIREGSI*NLFRLL
Trigger: AAGAAGTCTAAATAAGTTTCATATGCTGCCCTCCCT...AATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000621899.4
CDS-3UTR GCA 90 bp CATTTAGGAAAATGGAGAGTTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTTTCTTCCAGGTTTGAGTaGACCAGCTTCAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: HLGKWRVPRRWEFLSFSFSSRFE*TSFSLF
Trigger: GAACAAGCTGAAGCTGGTGCACTCAAACCTGGAAGA...AAATGAAAAAGACAGAAATTCCCACCTTCGTGGAACTCTCCATTTTCCTAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR GCA 90 bp TGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACATATGCATATCCAAGACATTaGACTCAAGTTTCTGAATCG +
Preference number: 4 (lower is better)
Translates to: CIIGLRRLQVHKLFNWTYAYPRH*TQVSES
Trigger: CGATTCAGAAACTTGAGTGCAATGTCTTGGATATGC...ATATGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp CATTTAGGAAAATGGAGAGTTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTTTTGCACTCAAGTTTCTaGATCGGCCTATTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: HLGKWRVPRRWEFLSFSFLHSSF*IGLLGW
Trigger: CCAACCTAATAGGCCGATTCAGAAACTTGAGTGCAA...AAATGAAAAAGACAGAAATTCCCACCTTCGTGGAACTCTCCATTTTCCTAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp ACATTTAGGAAAATGGAGAGTTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTGTCTTTGGGAAGTTCTaGGGCCAGGAAATCCAAATT +
Preference number: 4 (lower is better)
Translates to: TFRKMESSTKVGISVFFIVFGKF*GQEIQI
Trigger: AATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGAC...AATGAAAAAGACAGAAATTCCCACCTTCGTGGAACTCTCCATTTTCCTAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp ACATTTAGGAAAATGGAGAGTTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTCTACTGTTGTATCATTaGGCTGCGACGGTTACAAGT +
Preference number: 4 (lower is better)
Translates to: TFRKMESSTKVGISVFFILLLYH*AATVTS
Trigger: ACTTGTAACCGTCGCAGCCCAATGATACAACAGTAG...AATGAAAAAGACAGAAATTCCCACCTTCGTGGAACTCTCCATTTTCCTAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR TCA 90 bp CATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGATAATAAGGGAGGGCAGCATATaGAACTTATTTAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: HFTGLWEVLGPGNPNLIIREGSI*NLFRLL
Trigger: AAGAAGTCTAAATAAGTTTCATATGCTGCCCTCCCT...TATTATCAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000621899.4
CDS-3UTR GCA 90 bp CATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGATAATAGCATATCCAAGACATTaGACTCAAGTTTCTGAATCG +
Preference number: 4 (lower is better)
Translates to: HFTGLWEVLGPGNPNLIIAYPRH*TQVSES
Trigger: CGATTCAGAAACTTGAGTGCAATGTCTTGGATATGC...TATTATCAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp CTAACATTTAGGAAAATGGAGAGTTCCACGAAGGTGGGAATTTCTGTCTTTTTCAGAGTTCCACGAAGGTaGGAATTTCTGTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: LTFRKMESSTKVGISVFFRVPRR*EFLSFS
Trigger: TGAAAAAGACAGAAATTCCCACCTTCGTGGAACTCT...GAAAAAGACAGAAATTCCCACCTTCGTGGAACTCTCCATTTTCCTAAATGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CCA 90 bp TCCAAATTTGATAATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGAAGTATACGTTCATTTaGCATTTTAAGTACCCCAGG +
Preference number: 4 (lower is better)
Translates to: SKFDNRIFSTELRAEHRWKYTFI*HFKYPR
Trigger: CCTGGGGTACTTAAAATGCCAAATGAACGTATACTT...CCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTATTATCAAATTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000621899.4
CDS-3UTR TCA 90 bp ATTTGTTGGGTGAATCAAGGAATGAAAATCACATTCAAGCCAATACACGTGATTTTGGGCTGTATTCAGTaGTGTCAGAAGATTCTGTCA +
Preference number: 4 (lower is better)
Translates to: ICWVNQGMKITFKPIHVILGCIQ*CQKILS
Trigger: TGACAGAATCTTCTGACATCACTGAATACAGCCCAA...AATCACGTGTATTGGCTTGAATGTGATTTTCATTCCTTGATTCACCCAACAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
CDS-3UTR GCA 90 bp ACATTTAGGAAAATGGAGAGTTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTTGGTTCAAACTAAATTaGCAGGGAATTGTCATGGTC +
Preference number: 4 (lower is better)
Translates to: TFRKMESSTKVGISVFFIWFKLN*QGIVMV
Trigger: GACCATGACAATTCCCTGGCAATTTAGTTTGAACCA...AATGAAAAAGACAGAAATTCCCACCTTCGTGGAACTCTCCATTTTCCTAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS TCA 90 bp TTCCGGTGGCTTGGGATGTCAGCATTGAAGACGATCACCACTCCATaGGCATCCTTCATCAGGGCCGGCCAGCAGGACTCAAACCTCGCA +
Preference number: 5 (lower is better)
Translates to: FRWLGMSALKTITTP*ASFIRAGQQDSNLA
Trigger: TGCGAGGTTTGAGTCCTGCTGGCCGGCCCTGATGAAGGATGCTCATGGAGTGGTGATCGTCTTCAATGCTGACATCCCAAGCCACCGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468833.1
ENST00000495166.1
ENST00000621899.4
CDS TCA 90 bp TTCCGGTGGCTTGGGATGTCAGCATTGAAGACGATCACCACTCCATaGGCATCCTTCATCAGGGCCGGCCAGCAGGACTCAAACCTCACT +
Preference number: 5 (lower is better)
Translates to: FRWLGMSALKTITTP*ASFIRAGQQDSNLT
Trigger: AGTGAGGTTTGAGTCCTGCTGGCCGGCCCTGATGAAGGATGCTCATGGAGTGGTGATCGTCTTCAATGCTGACATCCCAAGCCACCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437644.2
CDS-3UTR CAA 90 bp CAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTCCCGTGCCTTTGTTGTaGCTGGTAACATGCGGGTTC +
Preference number: 5 (lower is better)
Translates to: QICTEKHADFTGDVAVPGPVPLL*LVTCGF
Trigger: GAACCCGCATGTTACCAGCAACAACAAAGGCACGGG...ACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000498704.6
ENST00000517481.5
CDS-3UTR CAA 90 bp TATGCTGTCTATGGTCAGCAGCTAGAACAGCAGTGCACACACAGCAGGTGCTCACAGCCCGTGCCTTTGTaGTTGCTGGTAACATGCGGG +
Preference number: 5 (lower is better)
Translates to: YAVYGQQLEQQCTHSRCSQPVPL*LLVTCG
Trigger: CCCGCATGTTACCAGCAACAACAAAGGCACGGGCTG...TGAGCACCTGCTGTGTGTGCACTGCTGTTCTAGCTGCTGACCATAGACAGCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
CDS-3UTR CAA 90 bp TCCAGGTTTGAGTGCACCAGCTTCAGCTTGTTCAAGGGTGGCGACAAAGACAGGTCACAGCCCGTGCCTTaGTTGTTGCTGGTAACATGC +
Preference number: 5 (lower is better)
Translates to: SRFECTSFSLFKGGDKDRSQPVP*LLLVTC
Trigger: GCATGTTACCAGCAACAACAAAGGCACGGGCTGTGA...CCTGTCTTTGTCGCCACCCTTGAACAAGCTGAAGCTGGTGCACTCAAACCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
CDS-3UTR CAA 90 bp CAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTTGCACCAGCTTCAGCTaGTTCAAGGGTGGCGACAAA +
Preference number: 5 (lower is better)
Translates to: QICTEKHADFTGDVAVPGCTSFS*FKGGDK
Trigger: TTTGTCGCCACCCTTGAACAAGCTGAAGCTGGTGCA...ACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp CAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTGGTCATCTTCCAGGTTaGAGTGCACCAGCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: QICTEKHADFTGDVAVPGGHLPG*SAPASA
Trigger: AGCTGAAGCTGGTGCACTCAAACCTGGAAGATGACC...ACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS GCA 90 bp CATAGCTCGAATTCACAGCCCGTGCCTTTGTTGTTGCTGGTAACATaGGGGTTCTCAAATTCTAGGATCCTCGCAAGGCCCCACGAAGAG +
Preference number: 5 (lower is better)
Translates to: HSSNSQPVPLLLLVT*GFSNSRILARPHEE
Trigger: CTCTTCGTGGGGCCTTGCGAGGATCCTAGAATTTGAGAACCCGCATGTTACCAGCAACAACAAAGGCACGGGCTGTGAATTCGAGCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485695.1
ENST00000498704.6
CDS-3UTR CAA 90 bp GTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGACAGCCCGTGCCTTTGTaGTTGCTGGTAACATGCGGG +
Preference number: 5 (lower is better)
Translates to: VRGRRKHQELDVISDLHRQPVPL*LLVTCG
Trigger: CCCGCATGTTACCAGCAACAACAAAGGCACGGGCTG...TCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000498704.6
ENST00000517481.5
CDS-3UTR CAA 90 bp CAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTCTTGGGATGTCAGCATaGAAGACGATCACCACTCCA +
Preference number: 5 (lower is better)
Translates to: QICTEKHADFTGDVAVPGLGMSA*KTITTP
Trigger: TGGAGTGGTGATCGTCTTCAATGCTGACATCCCAAG...ACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp TATGCTGTCTATGGTCAGCAGCTAGAACAGCAGTGCACACACAGCAGGTGCTCATGCACCAGCTTCAGCTaGTTCAAGGGTGGCGACAAA +
Preference number: 5 (lower is better)
Translates to: YAVYGQQLEQQCTHSRCSCTSFS*FKGGDK
Trigger: TTTGTCGCCACCCTTGAACAAGCTGAAGCTGGTGCA...TGAGCACCTGCTGTGTGTGCACTGCTGTTCTAGCTGCTGACCATAGACAGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp GGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACATATGTGAGGTGGAGGGAGGAGAATCAGTaGAACCCGGAGGGTGGAGAT +
Preference number: 5 (lower is better)
Translates to: GLRRLQVHKLFNWTYVRWREENQ*NPEGGD
Trigger: ATCTCCACCCTCCGGGTTCAACTGATTCTCCTCCCT...CCACCTCACATATGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR CAA 90 bp AGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTGCTCAAACCTCACTCCTaGGGTTGGGCTGTATTCAGT +
Preference number: 5 (lower is better)
Translates to: RSAPRNMLISLGMWQSQVLKPHS*GWAVFS
Trigger: ACTGAATACAGCCCAACCCAAGGAGTGAGGTTTGAG...CACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437644.2
CDS-3UTR CAA 90 bp GGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGTCCTCCGGGCAGTGGTaGGAATCAAGGTCTCGCAAG +
Preference number: 5 (lower is better)
Translates to: GCDFRSAPRNMLISLGMWSSGQW*ESRSRK
Trigger: CTTGCGAGACCTTGATTCCAACCACTGCCCGGAGGA...CCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517481.5
CDS-3UTR CAA 90 bp CAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTACAGTTTTTCCACTCTaGGGCCTTCGGGGCTCATTA +
Preference number: 5 (lower is better)
Translates to: QICTEKHADFTGDVAVPGTVFPL*GLRGSL
Trigger: TAATGAGCCCCGAAGGCCCAAGAGTGGAAAAACTGT...ACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517481.5
CDS GCA 90 bp GTGGACTCACATGGAGAGGGTAACAATTGCCTAGGGTACAGTAGGTaGTCAGTAACTGGACAGAGCTGCTGGTTTCTAGGACATGGGACA +
Preference number: 5 (lower is better)
Translates to: VDSHGEGNNCLGYSR*SVTGQSCWFLGHGT
Trigger: TGTCCCATGTCCTAGAAACCAGCAGCTCTGTCCAGTTACTGAGCACCTACTGTACCCTAGGCAATTGTTACCCTCTCCATGTGAGTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468833.1
ENST00000485695.1
CDS-3UTR CAA 90 bp GTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGACCCGTGCCTTTGTTGTaGCTGGTAACATGCGGGTTC +
Preference number: 5 (lower is better)
Translates to: VRGRRKHQELDVISDLHRPVPLL*LVTCGF
Trigger: GAACCCGCATGTTACCAGCAACAACAAAGGCACGGG...TCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000498704.6
ENST00000517481.5
CDS-3UTR CAA 90 bp TATGCTGTCTATGGTCAGCAGCTAGAACAGCAGTGCACACACAGCAGGTGCTCACTTGGGATGTCAGCATaGAAGACGATCACCACTCCA +
Preference number: 5 (lower is better)
Translates to: YAVYGQQLEQQCTHSRCSLGMSA*KTITTP
Trigger: TGGAGTGGTGATCGTCTTCAATGCTGACATCCCAAG...TGAGCACCTGCTGTGTGTGCACTGCTGTTCTAGCTGCTGACCATAGACAGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp GGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACATATGTGAGGTGGTGCACCAGCTTCAGCTaGTTCAAGGGTGGCGACAAA +
Preference number: 5 (lower is better)
Translates to: GLRRLQVHKLFNWTYVRWCTSFS*FKGGDK
Trigger: TTTGTCGCCACCCTTGAACAAGCTGAAGCTGGTGCA...CCACCTCACATATGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp GAGGTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAGGTCATCTTCCAGGTTaGAGTGCACCAGCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: EVVNPSILQVFGKFWGQEGHLPG*SAPASA
Trigger: AGCTGAAGCTGGTGCACTCAAACCTGGAAGATGACC...TTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp AGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCCAGGTGACTACTGTTGTATCATaGGGCTGCGACGGTTACAAG +
Preference number: 5 (lower is better)
Translates to: RSAPRNMLISLGMWQSQVTTVVS*GCDGYK
Trigger: CTTGTAACCGTCGCAGCCCAATGATACAACAGTAGT...CACCTGGGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp TCTAGTCTCAACTACTCAGAGGCTGAGCTGGCGAGATCAGTGGAGCCCAGGAGAGCCAGTCGGTATTTGTaGGGTGAATCAAGGAATGAA +
Preference number: 5 (lower is better)
Translates to: SSLNYSEAELARSVEPRRASRYL*GESRNE
Trigger: TTCATTCCTTGATTCACCCAACAAATACCGACTGGC...TCTCCTGGGCTCCACTGATCTCGCCAGCTCAGCCTCTGAGTAGTTGAGACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR CAA 90 bp TGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTGGGGTTTCACCACGTaGGTCAGGATGGTCTCGATC +
Preference number: 5 (lower is better)
Translates to: CDFRSAPRNMLISLGMWQWGFTT*VRMVSI
Trigger: GATCGAGACCATCCTGACCAACGTGGTGAAACCCCA...CTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp ACGCCCTGTGTGACAGGTGCCTTCCTGCAGGTAGGAACACTTCCTCTGCAGTCAGGCACTTCAAATTTTTaGTCTCTGTGTGTCTGCGAA +
Preference number: 5 (lower is better)
Translates to: TPCVTGAFLQVGTLPLQSGTSNF*SLCVCE
Trigger: TTCGCAGACACACAGAGACAAAAAATTTGAAGTGCC...TGACTGCAGAGGAAGTGTTCCTACCTGCAGGAAGGCACCTGTCACACAGGGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315322.10
ENST00000621899.4
CDS-3UTR CAA 90 bp GAGGTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAATTGGCCAGGCTGTTCTaGAACTCCTGGCTTCCATCA +
Preference number: 5 (lower is better)
Translates to: EVVNPSILQVFGKFWGQELARLF*NSWLPS
Trigger: TGATGGAAGCCAGGAGTTCAAGAACAGCCTGGCCAA...TTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR CAA 90 bp TGTTGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACACCACTGCGCCTGGCCTaGGGTTGTTATACTGGGGTC +
Preference number: 5 (lower is better)
Translates to: CCIIGLRRLQVHKLFNWTPLRLA*GCYTGV
Trigger: GACCCCAGTATAACAACCCAAGGCCAGGCGCAGTGG...TGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR CAA 90 bp TACTGTTGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGCAGCCCGTGCCTTTGTaGTTGCTGGTAACATGCGGG +
Preference number: 5 (lower is better)
Translates to: YCCIIGLRRLQVHKLFNWQPVPL*LLVTCG
Trigger: CCCGCATGTTACCAGCAACAACAAAGGCACGGGCTG...CCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACAACAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000498704.6
ENST00000517481.5
CDS-3UTR CAA 90 bp GGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCATCACAGCCCGTGCCTTaGTTGTTGCTGGTAACATGC +
Preference number: 5 (lower is better)
Translates to: GKSLHFTGLWEVLGPGNPSQPVP*LLLVTC
Trigger: GCATGTTACCAGCAACAACAAAGGCACGGGCTGTGA...TGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000498704.6
ENST00000517481.5
CDS-3UTR CAA 90 bp GCAGTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACTGCACCAGCTTCAGCTaGTTCAAGGGTGGCGACAAA +
Preference number: 5 (lower is better)
Translates to: AVRGRRKHQELDVISDLHCTSFS*FKGGDK
Trigger: TTTGTCGCCACCCTTGAACAAGCTGAAGCTGGTGCA...GTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp TGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGCCATTTTACAGGTCTTaGGGAAGTTCTGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: CDFRSAPRNMLISLGMWQPFYRS*GSSGAR
Trigger: CCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGG...CTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp GGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCCATTTTACAGGTCTTaGGGAAGTTCTGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GCDFRSAPRNMLISLGMWPFYRS*GSSGAR
Trigger: CCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGG...CCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp GCAGTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCCATTTTACAGGTCTTaGGGAAGTTCTGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: AVRGRRKHQELDVISDLHPFYRS*GSSGAR
Trigger: CCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGG...GTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp TATGCTGTCTATGGTCAGCAGCTAGAACAGCAGTGCACACACAGCAGGTGCTCAACTACTGTTGTATCATaGGGCTGCGACGGTTACAAG +
Preference number: 5 (lower is better)
Translates to: YAVYGQQLEQQCTHSRCSTTVVS*GCDGYK
Trigger: CTTGTAACCGTCGCAGCCCAATGATACAACAGTAGT...TGAGCACCTGCTGTGTGTGCACTGCTGTTCTAGCTGCTGACCATAGACAGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS CCA 90 bp TTGGACACTCTGGGACACAGATTTGTCAGGGCTCACCTCACTCCTTaGGTTGGGCTGTATTCAGTGATGTCAGAAGATTCTGTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: LDTLGHRFVRAHLTP*VGLYSVMSEDSVRK
Trigger: CTTTCTGACAGAATCTTCTGACATCACTGAATACAGCCCAACCCAAGGAGTGAGGTGAGCCCTGACAAATCTGTGTCCCAGAGTGTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440362.5
CDS-3UTR CAA 90 bp TACTGTTGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGCCCGTGCCTTTGTTGTaGCTGGTAACATGCGGGTTC +
Preference number: 5 (lower is better)
Translates to: YCCIIGLRRLQVHKLFNWPVPLL*LVTCGF
Trigger: GAACCCGCATGTTACCAGCAACAACAAAGGCACGGG...CCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACAACAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000498704.6
ENST00000517481.5
CDS-3UTR CAA 90 bp GGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATCACAGCCCGTGCCTTaGTTGTTGCTGGTAACATGC +
Preference number: 5 (lower is better)
Translates to: GRRKHQELDVISDLHRETSQPVP*LLLVTC
Trigger: GCATGTTACCAGCAACAACAAAGGCACGGGCTGTGA...TGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000498704.6
ENST00000517481.5
CDS-3UTR CAA 90 bp TGCAGTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCATGCACCAGCTTCAGCTaGTTCAAGGGTGGCGACAAA +
Preference number: 5 (lower is better)
Translates to: CSQREKKTSGAGCDFRSACTSFS*FKGGDK
Trigger: TTTGTCGCCACCCTTGAACAAGCTGAAGCTGGTGCA...TGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp GGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACAGGTCATCTTCCAGGTTaGAGTGCACCAGCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: GRRKHQELDVISDLHRETGHLPG*SAPASA
Trigger: AGCTGAAGCTGGTGCACTCAAACCTGGAAGATGACC...TGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp GATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGCAGTCCACTACTGTTGTATCATaGGGCTGCGACGGTTACAAG +
Preference number: 5 (lower is better)
Translates to: DFRSAPRNMLISLGMWQSTTVVS*GCDGYK
Trigger: CTTGTAACCGTCGCAGCCCAATGATACAACAGTAGT...GGACTGCCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp ATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTTGGGGTTTCACCACGTaGGTCAGGATGGTCTCGATC +
Preference number: 5 (lower is better)
Translates to: IPPFYRSLGSSGARKSKFWGFTT*VRMVSI
Trigger: GATCGAGACCATCCTGACCAACGTGGTGAAACCCCA...AAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000517481.5
ENST00000621899.4
CDS GCA 90 bp ATTTTTAGTAGAGACGTAGTGGACTCACATGGAGAGGGTAACAATTaGCTAGGGTACAGTAGGTGCTCAGTAACTGGACAGAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: IFSRDVVDSHGEGNN*LGYSRCSVTGQSCW
Trigger: CCAGCAGCTCTGTCCAGTTACTGAGCACCTACTGTACCCTAGGCAATTGTTACCCTCTCCATGTGAGTCCACTACGTCTCTACTAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468833.1
ENST00000485695.1
CDS-3UTR CAA 90 bp GGATCAAGTATACGTTCATTTGGCATTTTAAGTACCCCAGGTTCCCTCATTATCCAGCCCGTGCCTTTGTaGTTGCTGGTAACATGCGGG +
Preference number: 5 (lower is better)
Translates to: GSSIRSFGILSTPGSLIIQPVPL*LLVTCG
Trigger: CCCGCATGTTACCAGCAACAACAAAGGCACGGGCTG...GATAATGAGGGAACCTGGGGTACTTAAAATGCCAAATGAACGTATACTTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315322.10
ENST00000422177.5
CDS-3UTR CAA 90 bp GGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACACTTGGGATGTCAGCATaGAAGACGATCACCACTCCA +
Preference number: 5 (lower is better)
Translates to: GRRKHQELDVISDLHRETLGMSA*KTITTP
Trigger: TGGAGTGGTGATCGTCTTCAATGCTGACATCCCAAG...TGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp GACAAAGACAGGCTTCCTTTATCATCTCCAGAGCCTGGTTTGTGGTGTGCAATTCTTGGGATGTCAGCATaGAAGACGATCACCACTCCA +
Preference number: 5 (lower is better)
Translates to: DKDRLPLSSPEPGLWCAILGMSA*KTITTP
Trigger: TGGAGTGGTGATCGTCTTCAATGCTGACATCCCAAG...AATTGCACACCACAAACCAGGCTCTGGAGATGATAAAGGAAGCCTGTCTTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430911.5
CDS-3UTR CAA 90 bp TGTTGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACAGGTCATCTTCCAGGTTaGAGTGCACCAGCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: CCIIGLRRLQVHKLFNWTGHLPG*SAPASA
Trigger: AGCTGAAGCTGGTGCACTCAAACCTGGAAGATGACC...TGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp TACTGTTGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGCCATTTTACAGGTCTTaGGGAAGTTCTGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: YCCIIGLRRLQVHKLFNWPFYRS*GSSGAR
Trigger: CCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGG...CCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACAACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp GTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCACTACTGTTGTATCATaGGGCTGCGACGGTTACAAG +
Preference number: 5 (lower is better)
Translates to: VVNPSILQVFGKFWGQEITTVVS*GCDGYK
Trigger: CTTGTAACCGTCGCAGCCCAATGATACAACAGTAGT...GATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp ATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTCTGAGTGAACGCACTACTGTTGTATCATaGGGCTGCGACGGTTACAAG +
Preference number: 5 (lower is better)
Translates to: IGFSQLNSGQSTDGLSERTTVVS*GCDGYK
Trigger: CTTGTAACCGTCGCAGCCCAATGATACAACAGTAGT...GCGTTCACTCAGACCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp TTTGATAATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTCTGAGTGGGGTTTCGCCATGTaGGCCAGGCTGTTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: FDNRIFSTELRAEHRWSEWGFAM*ARLFLN
Trigger: GTTCAAGAACAGCCTGGCCAACATGGCGAAACCCCA...CTCAGACCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTATTATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS TCA 90 bp GCCAGCAGGACTCAAACCTCACTCCTTGGGTTGGGCTGTATTCAGTaGTGTCAGAAGATTCTGTCAGAAAGTTGGCCAAAACAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: ASRTQTSLLGLGCIQ*CQKILSESWPKQFF
Trigger: GAAAAACTGTTTTGGCCAACTTTCTGACAGAATCTTCTGACATCACTGAATACAGCCCAACCCAAGGAGTGAGGTTTGAGTCCTGCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437644.2
CDS-3UTR CAA 90 bp CATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGATAATACAGCCCGTGCCTTTGTaGTTGCTGGTAACATGCGGG +
Preference number: 5 (lower is better)
Translates to: HFTGLWEVLGPGNPNLIIQPVPL*LLVTCG
Trigger: CCCGCATGTTACCAGCAACAACAAAGGCACGGGCTG...TATTATCAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000498704.6
ENST00000517481.5
CDS-3UTR CAA 90 bp TCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGTCTCCAGAGCCTGGTTaGTGGTGTGCAATTAGCATA +
Preference number: 5 (lower is better)
Translates to: SGAGCDFRSAPRNMLISLSPEPG*WCAISI
Trigger: TATGCTAATTGCACACCACAAACCAGGCTCTGGAGA...CAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp TTTGATAATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTCTGAGTGCACCAGCTTCAGCTaGTTCAAGGGTGGCGACAAA +
Preference number: 5 (lower is better)
Translates to: FDNRIFSTELRAEHRWSECTSFS*FKGGDK
Trigger: TTTGTCGCCACCCTTGAACAAGCTGAAGCTGGTGCA...CTCAGACCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTATTATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp ATACACGTGATTAAACTACTGTTGTATCATTGGGCTGCGACGGTTACAAGTCCATGCACCAGCTTCAGCTaGTTCAAGGGTGGCGACAAA +
Preference number: 5 (lower is better)
Translates to: IHVIKLLLYHWAATVTSPCTSFS*FKGGDK
Trigger: TTTGTCGCCACCCTTGAACAAGCTGAAGCTGGTGCA...TGGACTTGTAACCGTCGCAGCCCAATGATACAACAGTAGTTTAATCACGTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp GTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCGTGATTAAACTACTGTaGTATCATTGGGCTGCGACG +
Preference number: 5 (lower is better)
Translates to: VVNPSILQVFGKFWGQEIVIKLL*YHWAAT
Trigger: CGTCGCAGCCCAATGATACAACAGTAGTTTAATCAC...GATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp ATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTCTGAGTGAACGCGTGATTAAACTACTGTaGTATCATTGGGCTGCGACG +
Preference number: 5 (lower is better)
Translates to: IGFSQLNSGQSTDGLSERVIKLL*YHWAAT
Trigger: CGTCGCAGCCCAATGATACAACAGTAGTTTAATCAC...GCGTTCACTCAGACCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp GTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCGCCAGTCGGTATTTGTaGGGTGAATCAAGGAATGAA +
Preference number: 5 (lower is better)
Translates to: VVNPSILQVFGKFWGQEIASRYL*GESRNE
Trigger: TTCATTCCTTGATTCACCCAACAAATACCGACTGGC...GATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp GAGGTGGTAAATCCCTCCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAGAAAGTGCCACAGTATaGATTTGGGGGTTACAAACA +
Preference number: 5 (lower is better)
Translates to: EVVNPSILQVFGKFWGQEESATV*IWGLQT
Trigger: TGTTTGTAACCCCCAAATCAATACTGTGGCACTTTC...TTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGGAGGGATTTACCACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315322.10
ENST00000621899.4
CDS TCA 90 bp GATTTGTCAGGGCTCACCTCACTCCTTGGGTTGGGCTGTATTCAGTaGTGTCAGAAGATTCTGTCAGAAAGTTGGCCAAAACAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: DLSGLTSLLGLGCIQ*CQKILSESWPKQFF
Trigger: GAAAAACTGTTTTGGCCAACTTTCTGACAGAATCTTCTGACATCACTGAATACAGCCCAACCCAAGGAGTGAGGTGAGCCCTGACAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440362.5
CDS-3UTR CAA 90 bp TCCAAATTTGATAATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTCACAGCCCGTGCCTTaGTTGTTGCTGGTAACATGC +
Preference number: 5 (lower is better)
Translates to: SKFDNRIFSTELRAEHRWSQPVP*LLLVTC
Trigger: GCATGTTACCAGCAACAACAAAGGCACGGGCTGTGA...CCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTATTATCAAATTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000498704.6
ENST00000517481.5
CDS-3UTR CAA 90 bp AAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTCTTGGGATGTCAGCATaGAAGACGATCACCACTCCA +
Preference number: 5 (lower is better)
Translates to: KTSGAGCDFRSAPRNMLILGMSA*KTITTP
Trigger: TGGAGTGGTGATCGTCTTCAATGCTGACATCCCAAG...AATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp TGTTGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGACATCTCCAGAGCCTGGTTaGTGGTGTGCAATTAGCATA +
Preference number: 5 (lower is better)
Translates to: CCIIGLRRLQVHKLFNWTSPEPG*WCAISI
Trigger: TATGCTAATTGCACACCACAAACCAGGCTCTGGAGA...TGTCCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp TTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTTATGCTGTCTATGGTCAGCAGGTCATCTTCCAGGTTaGAGTGCACCAGCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: FHEGGNFCLFHLCCLWSAGHLPG*SAPASA
Trigger: AGCTGAAGCTGGTGCACTCAAACCTGGAAGATGACC...TGCTGACCATAGACAGCATAAATGAAAAAGACAGAAATTCCCACCTTCGTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp CCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGATAATGGTCATCTTCCAGGTTaGAGTGCACCAGCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: PFYRSLGSSGARKSKFDNGHLPG*SAPASA
Trigger: AGCTGAAGCTGGTGCACTCAAACCTGGAAGATGACC...ATTATCAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp CCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGATAATCCATTTTACAGGTCTTaGGGAAGTTCTGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PFYRSLGSSGARKSKFDNPFYRS*GSSGAR
Trigger: CCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGG...ATTATCAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp CCAAATTTGATAATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTCCATTTTACAGGTCTTaGGGAAGTTCTGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PNLIIGFSQLNSGQSTDGPFYRS*GSSGAR
Trigger: CCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGG...ACCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTATTATCAAATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp TGCAGTCAGAGGGAGAAGAAAACATCAGGAGCTGGATGTGATTTCAGATCTGCAGTGATTAAACTACTGTaGTATCATTGGGCTGCGACG +
Preference number: 5 (lower is better)
Translates to: CSQREKKTSGAGCDFRSAVIKLL*YHWAAT
Trigger: CGTCGCAGCCCAATGATACAACAGTAGTTTAATCAC...TGCAGATCTGAAATCACATCCAGCTCCTGATGTTTTCTTCTCCCTCTGACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp ACATTTAGGAAAATGGAGAGTTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTCCCGTGCCTTTGTTGTaGCTGGTAACATGCGGGTTC +
Preference number: 5 (lower is better)
Translates to: TFRKMESSTKVGISVFFIPVPLL*LVTCGF
Trigger: GAACCCGCATGTTACCAGCAACAACAAAGGCACGGG...AATGAAAAAGACAGAAATTCCCACCTTCGTGGAACTCTCCATTTTCCTAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
CDS-3UTR CAA 90 bp CATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGATAATATCACAGCCCGTGCCTTaGTTGTTGCTGGTAACATGC +
Preference number: 5 (lower is better)
Translates to: HFTGLWEVLGPGNPNLIISQPVP*LLLVTC
Trigger: GCATGTTACCAGCAACAACAAAGGCACGGGCTGTGA...TATTATCAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000498704.6
ENST00000517481.5
CDS-3UTR CAA 90 bp TTTGATAATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTCTGAGTCTCCAGAGCCTGGTTaGTGGTGTGCAATTAGCATA +
Preference number: 5 (lower is better)
Translates to: FDNRIFSTELRAEHRWSESPEPG*WCAISI
Trigger: TATGCTAATTGCACACCACAAACCAGGCTCTGGAGA...CTCAGACCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTATTATCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp AAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTACTACTGTTGTATCATaGGGCTGCGACGGTTACAAG +
Preference number: 5 (lower is better)
Translates to: KTSGAGCDFRSAPRNMLITTVVS*GCDGYK
Trigger: CTTGTAACCGTCGCAGCCCAATGATACAACAGTAGT...AATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp TACTGTTGTATCATTGGGCTGCGACGGTTACAAGTCCACAAACTGTTTAACTGGGCCAGTCGGTATTTGTaGGGTGAATCAAGGAATGAA +
Preference number: 5 (lower is better)
Translates to: YCCIIGLRRLQVHKLFNWASRYL*GESRNE
Trigger: TTCATTCCTTGATTCACCCAACAAATACCGACTGGC...CCAGTTAAACAGTTTGTGGACTTGTAACCGTCGCAGCCCAATGATACAACAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp CATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGATAATACTTGGGATGTCAGCATaGAAGACGATCACCACTCCA +
Preference number: 5 (lower is better)
Translates to: HFTGLWEVLGPGNPNLIILGMSA*KTITTP
Trigger: TGGAGTGGTGATCGTCTTCAATGCTGACATCCCAAG...TATTATCAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp GGATCAAGTATACGTTCATTTGGCATTTTAAGTACCCCAGGTTCCCTCATTATCTCTCCAGAGCCTGGTTaGTGGTGTGCAATTAGCATA +
Preference number: 5 (lower is better)
Translates to: GSSIRSFGILSTPGSLIISPEPG*WCAISI
Trigger: TATGCTAATTGCACACCACAAACCAGGCTCTGGAGA...GATAATGAGGGAACCTGGGGTACTTAAAATGCCAAATGAACGTATACTTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000621899.4
CDS-3UTR CAA 90 bp TCCAAATTTGATAATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTCTCCAGAGCCTGGTTaGTGGTGTGCAATTAGCATA +
Preference number: 5 (lower is better)
Translates to: SKFDNRIFSTELRAEHRWSPEPG*WCAISI
Trigger: TATGCTAATTGCACACCACAAACCAGGCTCTGGAGA...CCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTATTATCAAATTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp CCAAATTTGATAATAGGATTTTCTCAACTGAACTCAGGGCAGAGCACAGATGGTTCTCCAGAGCCTGGTTaGTGGTGTGCAATTAGCATA +
Preference number: 5 (lower is better)
Translates to: PNLIIGFSQLNSGQSTDGSPEPG*WCAISI
Trigger: TATGCTAATTGCACACCACAAACCAGGCTCTGGAGA...ACCATCTGTGCTCTGCCCTGAGTTCAGTTGAGAAAATCCTATTATCAAATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000437644.2
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp ACATTTAGGAAAATGGAGAGTTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTGGTCATCTTCCAGGTTaGAGTGCACCAGCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: TFRKMESSTKVGISVFFIGHLPG*SAPASA
Trigger: AGCTGAAGCTGGTGCACTCAAACCTGGAAGATGACC...AATGAAAAAGACAGAAATTCCCACCTTCGTGGAACTCTCCATTTTCCTAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp GGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTTCACTGGGGATGTGGTGCCACAGTATTGATTaGGGGGTTACAAACATATTT +
Preference number: 5 (lower is better)
Translates to: GCDFRSAPRNMLISLGMWCHSID*GVTNIF
Trigger: AAATATGTTTGTAACCCCCAAATCAATACTGTGGCA...CCACATCCCCAGTGAAATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315322.10
ENST00000621899.4
CDS TCA 90 bp TCTCAAATTCTAGGATCCTCACTCCTTGGGTTGGGCTGTATTCAGTaGTGTCAGAAGATTCTGTCAGAAAGTTGGCCAAAACAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: SQILGSSLLGLGCIQ*CQKILSESWPKQFF
Trigger: GAAAAACTGTTTTGGCCAACTTTCTGACAGAATCTTCTGACATCACTGAATACAGCCCAACCCAAGGAGTGAGGATCCTAGAATTTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000517481.5
CDS-3UTR CAA 90 bp AAAACATCAGGAGCTGGATGTGATTTCAGATCTGCACCGAGAAACATGCTGATTGTGGTTCAAACTAAATaGCCAGGGAATTGTCATGGT +
Preference number: 5 (lower is better)
Translates to: KTSGAGCDFRSAPRNMLIVVQTK*PGNCHG
Trigger: ACCATGACAATTCCCTGGCAATTTAGTTTGAACCAC...AATCAGCATGTTTCTCGGTGCAGATCTGAAATCACATCCAGCTCCTGATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315322.10
CDS-3UTR CAA 90 bp CTAACATTTAGGAAAATGGAGAGTTCCACGAAGGTGGGAATTTCTGTCTTTTTCGTGATTAAACTACTGTaGTATCATTGGGCTGCGACG +
Preference number: 5 (lower is better)
Translates to: LTFRKMESSTKVGISVFFVIKLL*YHWAAT
Trigger: CGTCGCAGCCCAATGATACAACAGTAGTTTAATCAC...GAAAAAGACAGAAATTCCCACCTTCGTGGAACTCTCCATTTTCCTAAATGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp CATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGATAATAGTGATTAAACTACTGTaGTATCATTGGGCTGCGACG +
Preference number: 5 (lower is better)
Translates to: HFTGLWEVLGPGNPNLIIVIKLL*YHWAAT
Trigger: CGTCGCAGCCCAATGATACAACAGTAGTTTAATCAC...TATTATCAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000498704.6
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp CCATTTTACAGGTCTTTGGGAAGTTCTGGGGCCAGGAAATCCAAATTTGATAATGGCACTTCAAATTTTTaGTCTCTGTGTGTCTGCGAA +
Preference number: 5 (lower is better)
Translates to: PFYRSLGSSGARKSKFDNGTSNF*SLCVCE
Trigger: TTCGCAGACACACAGAGACAAAAAATTTGAAGTGCC...ATTATCAAATTTGGATTTCCTGGCCCCAGAACTTCCCAAAGACCTGTAAAATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315322.10
ENST00000621899.4
CDS-3UTR CAA 90 bp ATTTGTTGGGTGAATCAAGGAATGAAAATCACATTCAAGCCAATACACGTGATTGCCAGTCGGTATTTGTaGGGTGAATCAAGGAATGAA +
Preference number: 5 (lower is better)
Translates to: ICWVNQGMKITFKPIHVIASRYL*GESRNE
Trigger: TTCATTCCTTGATTCACCCAACAAATACCGACTGGC...AATCACGTGTATTGGCTTGAATGTGATTTTCATTCCTTGATTCACCCAACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000517481.5
ENST00000621899.4
CDS-3UTR CAA 90 bp CATTTAGGAAAATGGAGAGTTCCACGAAGGTGGGAATTTCTGTCTTTTTCATTTGAAAGTGCCACAGTATaGATTTGGGGGTTACAAACA +
Preference number: 5 (lower is better)
Translates to: HLGKWRVPRRWEFLSFSFESATV*IWGLQT
Trigger: TGTTTGTAACCCCCAAATCAATACTGTGGCACTTTC...AAATGAAAAAGACAGAAATTCCCACCTTCGTGGAACTCTCCATTTTCCTAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315322.10
ENST00000621899.4
CDS-3UTR CAA 90 bp ATTTGTTGGGTGAATCAAGGAATGAAAATCACATTCAAGCCAATACACGTGATTTGCCACAGTATTGATTaGGGGGTTACAAACATATTT +
Preference number: 5 (lower is better)
Translates to: ICWVNQGMKITFKPIHVICHSID*GVTNIF
Trigger: AAATATGTTTGTAACCCCCAAATCAATACTGTGGCA...AATCACGTGTATTGGCTTGAATGTGATTTTCATTCCTTGATTCACCCAACAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315322.10
ENST00000621899.4
CDS CAA 90 bp ACGGGGTCTCCCTATATTGCCCAGGCCTCAGGCGATCCTCCCGCTTaGACCTCCCAGAGCACTGGGATTAGAGGAATGAGCCTCCCTGCC +
Preference number: 6 (lower is better)
Translates to: TGSPYIAQASGDPPA*TSQSTGIRGMSLPA
Trigger: GGCAGGGAGGCTCATTCCTCTAATCCCAGTGCTCTGGGAGGTCAAAGCGGGAGGATCGCCTGAGGCCTGGGCAATATAGGGAGACCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440362.5
CDS CAA 72 bp CCCTGCCGAGCCAGTTGGACACTCTGGGACACAGATTaGTCAGGGCTCACCTCACTCCTTGGGTTGGGCTGT +
Preference number: 6 (lower is better)
Translates to: PCRASWTLWDTD*SGLTSLLGLGC
Trigger: ACAGCCCAACCCAAGGAGTGAGGTGAGCCCTGACAAATCTGTGTCCCAGAGTGTCCAACTGGCTCGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440362.5
CDS CAA 72 bp CCCTATATTGCCCAGGCCTCAGGCGATCCTCCCGCTTaGACCTCCCAGAGCACTGGGATTAGAGGAATGAGC +
Preference number: 6 (lower is better)
Translates to: PYIAQASGDPPA*TSQSTGIRGMS
Trigger: GCTCATTCCTCTAATCCCAGTGCTCTGGGAGGTCAAAGCGGGAGGATCGCCTGAGGCCTGGGCAATATAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440362.5
CDS CCA 72 bp AGGAATGAGCCTCCCTGCCGAGCCAGTTGGACACTCTaGGACACAGATTTGTCAGGGCTCACCTCACTCCTT +
Preference number: 6 (lower is better)
Translates to: RNEPPCRASWTL*DTDLSGLTSLL
Trigger: AAGGAGTGAGGTGAGCCCTGACAAATCTGTGTCCCAGAGTGTCCAACTGGCTCGGCAGGGAGGCTCATTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440362.5
CDS CAA 90 bp CCACCACAGTCCCATAGCTCGAATTCACAGCCCGTGCCTTTGTTGTaGCTGGTAACATGCGGGTTCTCAAATTCTAGGATCCTCGCAAGG +
Preference number: 6 (lower is better)
Translates to: PPQSHSSNSQPVPLL*LVTCGFSNSRILAR
Trigger: CCTTGCGAGGATCCTAGAATTTGAGAACCCGCATGTTACCAGCAACAACAAAGGCACGGGCTGTGAATTCGAGCTATGGGACTGTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485695.1
ENST00000498704.6
CDS CAA 90 bp TCGCCACCACAGTCCCATAGCTCGAATTCACAGCCCGTGCCTTTGTaGTTGCTGGTAACATGCGGGTTCTCAAATTCTAGGATCCTCGCA +
Preference number: 6 (lower is better)
Translates to: SPPQSHSSNSQPVPL*LLVTCGFSNSRILA
Trigger: TGCGAGGATCCTAGAATTTGAGAACCCGCATGTTACCAGCAACAACAAAGGCACGGGCTGTGAATTCGAGCTATGGGACTGTGGTGGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485695.1
ENST00000498704.6
CDS CAA 90 bp GCATCGCCACCACAGTCCCATAGCTCGAATTCACAGCCCGTGCCTTaGTTGTTGCTGGTAACATGCGGGTTCTCAAATTCTAGGATCCTA +
Preference number: 6 (lower is better)
Translates to: ASPPQSHSSNSQPVP*LLLVTCGFSNSRIL
Trigger: TAGGATCCTAGAATTTGAGAACCCGCATGTTACCAGCAACAACAAAGGCACGGGCTGTGAATTCGAGCTATGGGACTGTGGTGGCGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440362.5
CDS GCA 72 bp CATGGAGAGGGTAACAATTGCCTAGGGTACAGTAGGTaGTCAGTAACTGGACAGAGCTGCTGGTTTCTAGGA +
Preference number: 6 (lower is better)
Translates to: HGEGNNCLGYSR*SVTGQSCWFLG
Trigger: TCCTAGAAACCAGCAGCTCTGTCCAGTTACTGAGCACCTACTGTACCCTAGGCAATTGTTACCCTCTCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468833.1
ENST00000485695.1
CDS CCA 72 bp CTGGGACACAGATTTGTCAGGGCTCACCTCACTCCTTaGGTTGGGCTGTATTCAGTGATGTCAGAAGATTCT +
Preference number: 6 (lower is better)
Translates to: LGHRFVRAHLTP*VGLYSVMSEDS
Trigger: AGAATCTTCTGACATCACTGAATACAGCCCAACCCAAGGAGTGAGGTGAGCCCTGACAAATCTGTGTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440362.5
CDS CCA 72 bp GGGTACAGTAGGTGCTCAGTAACTGGACAGAGCTGCTaGTTTCTAGGACATGGGACAATATGTAGGTGTCCA +
Preference number: 6 (lower is better)
Translates to: GYSRCSVTGQSC*FLGHGTICRCP
Trigger: TGGACACCTACATATTGTCCCATGTCCTAGAAACCAGCAGCTCTGTCCAGTTACTGAGCACCTACTGTACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468833.1
ENST00000485695.1
CDS CAA 72 bp TCTGGGACACAGATTTGTCAGGGCTCACCTCACTCCTaGGGTTGGGCTGTATTCAGTGATGTCAGAAGATTC +
Preference number: 6 (lower is better)
Translates to: SGTQICQGSPHS*GWAVFSDVRRF
Trigger: GAATCTTCTGACATCACTGAATACAGCCCAACCCAAGGAGTGAGGTGAGCCCTGACAAATCTGTGTCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440362.5
CDS CAA 90 bp GTTGGACACTCTGGGACACAGATTTGTCAGGGCTCACCTCACTCCTaGGGTTGGGCTGTATTCAGTGATGTCAGAAGATTCTGTCAGAAA +
Preference number: 6 (lower is better)
Translates to: VGHSGTQICQGSPHS*GWAVFSDVRRFCQK
Trigger: TTTCTGACAGAATCTTCTGACATCACTGAATACAGCCCAACCCAAGGAGTGAGGTGAGCCCTGACAAATCTGTGTCCCAGAGTGTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440362.5
CDS CAA 90 bp CCACCACAGTCCCATAGCTCGAATTCACAGCCCGTGCCTTTGTTGTaGCTGGTAACATGCGGGTTCTCAAATTCTAGGATCCTAAAAGGA +
Preference number: 6 (lower is better)
Translates to: PPQSHSSNSQPVPLL*LVTCGFSNSRILKG
Trigger: TCCTTTTAGGATCCTAGAATTTGAGAACCCGCATGTTACCAGCAACAACAAAGGCACGGGCTGTGAATTCGAGCTATGGGACTGTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440362.5
CDS CAA 90 bp TCGCCACCACAGTCCCATAGCTCGAATTCACAGCCCGTGCCTTTGTaGTTGCTGGTAACATGCGGGTTCTCAAATTCTAGGATCCTAAAA +
Preference number: 6 (lower is better)
Translates to: SPPQSHSSNSQPVPL*LLVTCGFSNSRILK
Trigger: TTTTAGGATCCTAGAATTTGAGAACCCGCATGTTACCAGCAACAACAAAGGCACGGGCTGTGAATTCGAGCTATGGGACTGTGGTGGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440362.5
CDS TCA 72 bp GGGCTCACCTCACTCCTTGGGTTGGGCTGTATTCAGTaGTGTCAGAAGATTCTGTCAGAAAGTTGGCCAAAA +
Preference number: 6 (lower is better)
Translates to: GLTSLLGLGCIQ*CQKILSESWPK
Trigger: TTTTGGCCAACTTTCTGACAGAATCTTCTGACATCACTGAATACAGCCCAACCCAAGGAGTGAGGTGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440362.5
CDS CAA 90 bp TCCTTACACAAAGACAGGCTTCCTTTATCATCTCCAGAGCCTGGTTaGTGGTGTGCAATTAGCATACACTGTGTGTCCTGTAAGGACGGC +
Preference number: 6 (lower is better)
Translates to: SLHKDRLPLSSPEPG*WCAISIHCVSCKDG
Trigger: GCCGTCCTTACAGGACACACAGTGTATGCTAATTGCACACCACAAACCAGGCTCTGGAGATGATAAAGGAAGCCTGTCTTTGTGTAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468833.1
ENST00000485695.1
CDS TCA 72 bp CTAGGATCCTCACTCCTTGGGTTGGGCTGTATTCAGTaGTGTCAGAAGATTCTGTCAGAAAGTTGGCCAAAA +
Preference number: 6 (lower is better)
Translates to: LGSSLLGLGCIQ*CQKILSESWPK
Trigger: TTTTGGCCAACTTTCTGACAGAATCTTCTGACATCACTGAATACAGCCCAACCCAAGGAGTGAGGATCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315322.10
ENST00000422177.5
ENST00000430911.5
ENST00000517481.5
CDS TCA 72 bp ACTCAAACCTCACTCCTTGGGTTGGGCTGTATTCAGTaGTGTCAGAAGATTCTGTCAGAAAGTTGGCCAAAA +
Preference number: 6 (lower is better)
Translates to: TQTSLLGLGCIQ*CQKILSESWPK
Trigger: TTTTGGCCAACTTTCTGACAGAATCTTCTGACATCACTGAATACAGCCCAACCCAAGGAGTGAGGTTTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437644.2