Pregenerated sensors for IFT20 (Homo sapiens)
Ensembl gene IDs: ENSG00000109083Ensembl transcript IDs: ENST00000322326.12, ENST00000357896.7, ENST00000395418.8, ENST00000577498.1, ENST00000578009.5, ENST00000578122.5, ENST00000578547.1, ENST00000578985.5, ENST00000579419.5, ENST00000580357.1, ENST00000580991.1, ENST00000583796.1, ENST00000585089.5, ENST00000585313.5, ENST00000588477.5
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GATGCTATTCCTGGGAAAACAATGATGAAGAATAAGGACAAGAAGTaGTCATTCCAGAAGGAAGAGTGGAAATTCAGCTGTGTAAAGAAC | + |
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Preference number: 1 (lower is better) Translates to: DAIPGKTMMKNKDKK*SFQKEEWKFSCVKN Trigger: GTTCTTTACACAGCTGAATTTCCACTCTTCCTTCTGGAATGATCACTTCTTGTCCTTATTCTTCATCATTGTTTTCCCAGGAATAGCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578985.5 |
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| 3UTR TCA 72 bp | CTTCAGGGGGCTGCATTCCTTACACGCCACCTCTTGTaGCATAGGTCATTGGTCAAGCCGCTGGAATGCTAC | + |
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Preference number: 3 (lower is better) Translates to: LQGAAFLTRHLL*HRSLVKPLECY Trigger: GTAGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCTGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| 3UTR TCA 72 bp | TTTACAAACTGCTTAGTTCCAACTAAGCATAAGAGGTaGGAACGTACACTGCAGGGCCACCAGCAGCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: FTNCLVPTKHKR*ERTLQGHQQQL Trigger: CAGCTGCTGCTGGTGGCCCTGCAGTGTACGTTCTCACCTCTTATGCTTAGTTGGAACTAAGCAGTTTGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR CCA 90 bp | AGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCGGATGTCCTTGGCCATaGCTGCCGGCCCCGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: RGLHSLHATSCDIGHWSSGCPWP*LPAPRR Trigger: CCGCCGCGGGGCCGGCAGCCATGGCCAAGGACATCC...GCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000588477.5 |
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| CDS-3UTR GCA 90 bp | AGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCGGTACCCAGCCAGCCTaGCACGGCCGCTGCCACGGA | + |
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Preference number: 4 (lower is better) Translates to: RGLHSLHATSCDIGHWSSGTQPA*HGRCHG Trigger: TCCGTGGCAGCGGCCGTGGCAGGCTGGCTGGGTACC...GCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000588477.5 |
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| CDS-3UTR CCA 90 bp | TTCAGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAGGATGTCCTTGGCCATaGCTGCCGGCCCCGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: FRGLHSLHATSCDIGHWSGCPWP*LPAPRR Trigger: CCGCCGCGGGGCCGGCAGCCATGGCCAAGGACATCC...TGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCTGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000588477.5 |
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| CDS-3UTR CCA 90 bp | TCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTGGATGTCCTTGGCCATaGCTGCCGGCCCCGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: SLHATSCDIGHWSSRWNAGCPWP*LPAPRR Trigger: CCGCCGCGGGGCCGGCAGCCATGGCCAAGGACATCC...AGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000588477.5 |
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| CDS-3UTR CCA 90 bp | GGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCCACCCAGGATGTCCTTaGCCATGGCTGCCGGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: GLHSLHATSCDIGHWSSRHPGCP*PWLPAP Trigger: CGGGGCCGGCAGCCATGGCCAAGGACATCCTGGGTG...GCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000588477.5 |
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| CDS-3UTR GCA 90 bp | GCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTACAGAGGTTGGTACCCAGCCAGCCTaGCACGGCCGCTGCCACGGA | + |
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Preference number: 4 (lower is better) Translates to: ATSCDIGHWSSRWNATEVGTQPA*HGRCHG Trigger: TCCGTGGCAGCGGCCGTGGCAGGCTGGCTGGGTACC...AACCTCTGTAGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000588477.5 |
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| CDS-3UTR CCA 90 bp | CAACTAAGCATAAGAGGTGAGAACGTACACTGCAGGGCCACCAGCAGCAGCTGTCACCCAGGATGTCCTTaGCCATGGCTGCCGGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: QLSIRGENVHCRATSSSCHPGCP*PWLPAP Trigger: CGGGGCCGGCAGCCATGGCCAAGGACATCCTGGGTG...ACAGCTGCTGCTGGTGGCCCTGCAGTGTACGTTCTCACCTCTTATGCTTAGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000588477.5 |
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| CDS-3UTR GCA 90 bp | CATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGGTACCCAGCCAGCCTaGCACGGCCGCTGCCACGGA | + |
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Preference number: 4 (lower is better) Translates to: HSLHATSCDIGHWSSRWNGTQPA*HGRCHG Trigger: TCCGTGGCAGCGGCCGTGGCAGGCTGGCTGGGTACC...ATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000588477.5 |
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| CDS-3UTR GCA 90 bp | CAACTAAGCATAAGAGGTGAGAACGTACACTGCAGGGCCACCAGCAGCAGCTGTGCCTGCCACGGCCGCTaGCACGGATACAGAGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: QLSIRGENVHCRATSSSCACHGR*HGYRAC Trigger: ACAGGCTCTGTATCCGTGGCAGCGGCCGTGGCAGGC...ACAGCTGCTGCTGGTGGCCCTGCAGTGTACGTTCTCACCTCTTATGCTTAGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000588477.5 |
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| CDS-3UTR GCA 90 bp | AGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCGCCTGCCACGGCCGCTaGCACGGATACAGAGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: RGLHSLHATSCDIGHWSSACHGR*HGYRAC Trigger: ACAGGCTCTGTATCCGTGGCAGCGGCCGTGGCAGGC...GCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000588477.5 |
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| CDS-3UTR CCA 90 bp | TCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTCACCCAGGATGTCCTTaGCCATGGCTGCCGGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: SLHATSCDIGHWSSRWNAHPGCP*PWLPAP Trigger: CGGGGCCGGCAGCCATGGCCAAGGACATCCTGGGTG...AGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000588477.5 |
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| CDS-3UTR TCA 90 bp | GGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCCGCTGCAGCCCAGGCTaGTGTAGACAGGCAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GLHSLHATSCDIGHWSSRRCSPG*CRQAAS Trigger: AGAAGCTGCCTGTCTACATCAGCCTGGGCTGCAGCG...GCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR GCA 90 bp | GCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTACAGAGGTTGCCTGCCACGGCCGCTaGCACGGATACAGAGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: ATSCDIGHWSSRWNATEVACHGR*HGYRAC Trigger: ACAGGCTCTGTATCCGTGGCAGCGGCCGTGGCAGGC...AACCTCTGTAGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000588477.5 |
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| CDS-3UTR GCA 90 bp | GGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCGGTGAGAACGTACACTaGAGGGCCACCAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GLHSLHATSCDIGHWSSRGENVH*RATSSS Trigger: GCTGCTGCTGGTGGCCCTGCAGTGTACGTTCTCACC...GCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR TCA 90 bp | CACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTACAGAGCGCTGCAGCCCAGGCTaGTGTAGACAGGCAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: HATSCDIGHWSSRWNATERCSPG*CRQAAS Trigger: AGAAGCTGCCTGTCTACATCAGCCTGGGCTGCAGCG...CTCTGTAGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR TCA 90 bp | ATCTCCAGCCCTAGGAAAGTCTTCTTTCAGAGAGCCAGCCAACTTCGTGGACCCCGCTGCAGCCCAGGCTaGTGTAGACAGGCAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ISSPRKVFFQRASQLRGPRCSPG*CRQAAS Trigger: AGAAGCTGCCTGTCTACATCAGCCTGGGCTGCAGCG...GGGTCCACGAAGTTGGCTGGCTCTCTGAAAGAAGACTTTCCTAGGGCTGGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578122.5 |
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| CDS-3UTR TCA 90 bp | AGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGCAGCCCAGGCTaGTGTAGACAGGCAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RGLHSLHATSCDIGHWSSRCSPG*CRQAAS Trigger: AGAAGCTGCCTGTCTACATCAGCCTGGGCTGCAGCG...GCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR GCA 90 bp | AGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCGGTGAGAACGTACACTaGAGGGCCACCAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RGLHSLHATSCDIGHWSSGENVH*RATSSS Trigger: GCTGCTGCTGGTGGCCCTGCAGTGTACGTTCTCACC...GCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR CCA 90 bp | CAACTAAGCATAAGAGGTGAGAACGTACACTGCAGGGCCACCAGCAGCAGCTGTACAGGCAGCTTCTCCTaGGTCAGCGACAGCCGGTAC | + |
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Preference number: 4 (lower is better) Translates to: QLSIRGENVHCRATSSSCTGSFS*VSDSRY Trigger: GTACCGGCTGTCGCTGACCCAGGAGAAGCTGCCTGT...ACAGCTGCTGCTGGTGGCCCTGCAGTGTACGTTCTCACCTCTTATGCTTAGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR CCA 90 bp | CACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTACAGAGACAGGCAGCTTCTCCTaGGTCAGCGACAGCCGGTAC | + |
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Preference number: 4 (lower is better) Translates to: HATSCDIGHWSSRWNATETGSFS*VSDSRY Trigger: GTACCGGCTGTCGCTGACCCAGGAGAAGCTGCCTGT...CTCTGTAGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR CCA 90 bp | AGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCACAGGCAGCTTCTCCTaGGTCAGCGACAGCCGGTAC | + |
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Preference number: 4 (lower is better) Translates to: RGLHSLHATSCDIGHWSSTGSFS*VSDSRY Trigger: GTACCGGCTGTCGCTGACCCAGGAGAAGCTGCCTGT...GCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR TCA 90 bp | TTCAGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCACGCTGCAGCCCAGGCTaGTGTAGACAGGCAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: FRGLHSLHATSCDIGHWSRCSPG*CRQAAS Trigger: AGAAGCTGCCTGTCTACATCAGCCTGGGCTGCAGCG...TGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR TCA 90 bp | CAACTAAGCATAAGAGGTGAGAACGTACACTGCAGGGCCACCAGCAGCAGCTGTCTGGGGGTACAAAGATaGATGCAACACGGTGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: QLSIRGENVHCRATSSSCLGVQR*MQHGAR Trigger: GCGGGCACCGTGTTGCATTCATCTTTGTACCCCCAG...ACAGCTGCTGCTGGTGGCCCTGCAGTGTACGTTCTCACCTCTTATGCTTAGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585089.5 |
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| CDS-3UTR GCA 90 bp | TCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTGGTGAGAACGTACACTaGAGGGCCACCAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SLHATSCDIGHWSSRWNAGENVH*RATSSS Trigger: GCTGCTGCTGGTGGCCCTGCAGTGTACGTTCTCACC...AGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR CCA 90 bp | TTCAGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAACAGGCAGCTTCTCCTaGGTCAGCGACAGCCGGTAC | + |
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Preference number: 4 (lower is better) Translates to: FRGLHSLHATSCDIGHWSTGSFS*VSDSRY Trigger: GTACCGGCTGTCGCTGACCCAGGAGAAGCTGCCTGT...TGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR GCA 90 bp | ATCTCCAGCCCTAGGAAAGTCTTCTTTCAGAGAGCCAGCCAACTTCGTGGACCCGGGTACAAAGATGAATaGAACACGGTGCCCGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: ISSPRKVFFQRASQLRGPGYKDE*NTVPAL Trigger: CAGGGCGGGCACCGTGTTGCATTCATCTTTGTACCC...GGGTCCACGAAGTTGGCTGGCTCTCTGAAAGAAGACTTTCCTAGGGCTGGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578122.5 |
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| CDS-3UTR GCA 90 bp | AGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCGGGTACAAAGATGAATaGAACACGGTGCCCGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: RGLHSLHATSCDIGHWSSGYKDE*NTVPAL Trigger: CAGGGCGGGCACCGTGTTGCATTCATCTTTGTACCC...GCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585089.5 |
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| CDS-3UTR GCA 90 bp | CACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTACAGAGCTGTCTTCAGGGGGCTaGATTCCTTACACGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: HATSCDIGHWSSRWNATELSSGG*IPYTPP Trigger: AGGTGGCGTGTAAGGAATGCAGCCCCCTGAAGACAG...CTCTGTAGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR GCA 90 bp | CAACTAAGCATAAGAGGTGAGAACGTACACTGCAGGGCCACCAGCAGCAGCTGTCTGTCTTCAGGGGGCTaGATTCCTTACACGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: QLSIRGENVHCRATSSSCLSSGG*IPYTPP Trigger: AGGTGGCGTGTAAGGAATGCAGCCCCCTGAAGACAG...ACAGCTGCTGCTGGTGGCCCTGCAGTGTACGTTCTCACCTCTTATGCTTAGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR GCA 90 bp | CATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGGTGAGAACGTACACTaGAGGGCCACCAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HSLHATSCDIGHWSSRWNGENVH*RATSSS Trigger: GCTGCTGCTGGTGGCCCTGCAGTGTACGTTCTCACC...ATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR CCA 90 bp | GGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCGGATGTCCTTGGCCATaGCTGTTTCCCATCCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: GLHSLHATSCDIGHWSSRGCPWP*LFPIQV Trigger: AACCTGGATGGGAAACAGCCATGGCCAAGGACATCC...GCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 |
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| CDS-3UTR TCA 90 bp | GGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCACTAAGCATAAGAGGTaGGAACGTACACTGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GLHSLHATSCDIGHWSSRTKHKR*ERTLQG Trigger: GCCCTGCAGTGTACGTTCTCACCTCTTATGCTTAGT...GCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR GCA 90 bp | TCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTCTGTCTTCAGGGGGCTaGATTCCTTACACGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: SLHATSCDIGHWSSRWNALSSGG*IPYTPP Trigger: AGGTGGCGTGTAAGGAATGCAGCCCCCTGAAGACAG...AGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR GCA 90 bp | TTCAGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCACTGTCTTCAGGGGGCTaGATTCCTTACACGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: FRGLHSLHATSCDIGHWSLSSGG*IPYTPP Trigger: AGGTGGCGTGTAAGGAATGCAGCCCCCTGAAGACAG...TGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR CCA 90 bp | GGAAAGTCTTCTTTCAGAGAGCCAGCCAACTTCGTGGACCCTTTCATGCTCAAAACAGGCAGCTTCTCCTaGGTCAGCGACAGCCGGTAC | + |
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Preference number: 4 (lower is better) Translates to: GKSSFREPANFVDPFMLKTGSFS*VSDSRY Trigger: GTACCGGCTGTCGCTGACCCAGGAGAAGCTGCCTGT...TTTGAGCATGAAAGGGTCCACGAAGTTGGCTGGCTCTCTGAAAGAAGACTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578122.5 |
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| CDS-3UTR CCA 90 bp | CAACTAAGCATAAGAGGTGAGAACGTACACTGCAGGGCCACCAGCAGCAGCTGTGGATGTCCTTGGCCATaGCTGTTTCCCATCCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: QLSIRGENVHCRATSSSCGCPWP*LFPIQV Trigger: AACCTGGATGGGAAACAGCCATGGCCAAGGACATCC...ACAGCTGCTGCTGGTGGCCCTGCAGTGTACGTTCTCACCTCTTATGCTTAGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 |
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| CDS-3UTR CCA 90 bp | TTCAGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCACTCGGGAGGGTGAGGTaGGAGAATCGCTTGAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRGLHSLHATSCDIGHWSLGRVR*ENRLNL Trigger: CAGATTCAAGCGATTCTCCCACCTCACCCTCCCGAG...TGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000357896.7 |
||
| CDS-3UTR TCA 90 bp | GCCAGCCAACTTCGTGGACCCTTTCATGCTCAAACTACTAGAGGTGGTTTGATACTGGGGGTACAAAGATaGATGCAACACGGTGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ASQLRGPFHAQTTRGGLILGVQR*MQHGAR Trigger: GCGGGCACCGTGTTGCATTCATCTTTGTACCCCCAG...TATCAAACCACCTCTAGTAGTTTGAGCATGAAAGGGTCCACGAAGTTGGCTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000578122.5 |
||
| CDS-3UTR TCA 90 bp | GCCCTAGGAAAGTCTTCTTTCAGAGAGCCAGCCAACTTCGTGGACCCTTTCATGAGAGGAGTTCTGCTCTaGAGGAGTGACAGTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALGKSSFREPANFVDPFMRGVLL*RSDSGS Trigger: ACTGCCACTGTCACTCCTTCAGAGCAGAACTCCTCT...CATGAAAGGGTCCACGAAGTTGGCTGGCTCTCTGAAAGAAGACTTTCCTAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578122.5 |
||
| CDS-3UTR TCA 90 bp | TTCAGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGAGGAGTTCTGCTCTaGAGGAGTGACAGTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FRGLHSLHATSCDIGHWSRGVLL*RSDSGS Trigger: ACTGCCACTGTCACTCCTTCAGAGCAGAACTCCTCT...TGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585089.5 |
||
| CDS-3UTR TCA 90 bp | CACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTACAGAGACACGCCACCTCTTGTaGCATAGGTCATTGGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HATSCDIGHWSSRWNATETRHLL*HRSLVK Trigger: CTTGACCAATGACCTATGTCACAAGAGGTGGCGTGT...CTCTGTAGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
||
| CDS-3UTR TCA 90 bp | AGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCACTAAGCATAAGAGGTaGGAACGTACACTGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGLHSLHATSCDIGHWSSTKHKR*ERTLQG Trigger: GCCCTGCAGTGTACGTTCTCACCTCTTATGCTTAGT...GCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
||
| CDS-3UTR TCA 90 bp | CAACTAAGCATAAGAGGTGAGAACGTACACTGCAGGGCCACCAGCAGCAGCTGTACTAAGCATAAGAGGTaGGAACGTACACTGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QLSIRGENVHCRATSSSCTKHKR*ERTLQG Trigger: GCCCTGCAGTGTACGTTCTCACCTCTTATGCTTAGT...ACAGCTGCTGCTGGTGGCCCTGCAGTGTACGTTCTCACCTCTTATGCTTAGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
||
| CDS-3UTR TCA 90 bp | CACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTACAGAGACTAAGCATAAGAGGTaGGAACGTACACTGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HATSCDIGHWSSRWNATETKHKR*ERTLQG Trigger: GCCCTGCAGTGTACGTTCTCACCTCTTATGCTTAGT...CTCTGTAGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
||
| CDS-3UTR GCA 90 bp | CATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATCTGTCTTCAGGGGGCTaGATTCCTTACACGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: HSLHATSCDIGHWSSRWNLSSGG*IPYTPP Trigger: AGGTGGCGTGTAAGGAATGCAGCCCCCTGAAGACAG...ATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
||
| CDS-3UTR GCA 90 bp | CAACTAAGCATAAGAGGTGAGAACGTACACTGCAGGGCCACCAGCAGCAGCTGTCACCAGCAGCAGCTGTaGACTGATGTTAAAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QLSIRGENVHCRATSSSCHQQQL*TDVKTG Trigger: GCCAGTTTTAACATCAGTGCACAGCTGCTGCTGGTG...ACAGCTGCTGCTGGTGGCCCTGCAGTGTACGTTCTCACCTCTTATGCTTAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
||
| CDS-3UTR GCA 90 bp | AGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCACCAGCAGCAGCTGTaGACTGATGTTAAAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGLHSLHATSCDIGHWSSHQQQL*TDVKTG Trigger: GCCAGTTTTAACATCAGTGCACAGCTGCTGCTGGTG...GCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
||
| CDS-3UTR CCA 90 bp | GGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGTGACATAGGTCATTaGTCAAGCCGCTGGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLHSLHATSCDIGHWSSRCDIGH*SSRWNA Trigger: AGCATTCCAGCGGCTTGACCAATGACCTATGTCACA...GCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCTAGGAAAGTCTTCTTTCAGAGAGCCAGCCAACTTCGTGGACCCTTTCAGCCAGCCAACTTCGTaGACCCTTTCATGCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PALGKSSFREPANFVDPFSQPTS*TLSCSN Trigger: GTTTGAGCATGAAAGGGTCCACGAAGTTGGCTGGCT...GAAAGGGTCCACGAAGTTGGCTGGCTCTCTGAAAGAAGACTTTCCTAGGGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578122.5 |
||
| CDS-3UTR TCA 90 bp | TTCAGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAACACGCCACCTCTTGTaGCATAGGTCATTGGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FRGLHSLHATSCDIGHWSTRHLL*HRSLVK Trigger: CTTGACCAATGACCTATGTCACAAGAGGTGGCGTGT...TGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
||
| CDS-3UTR TCA 90 bp | GCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTACAGAGGTTACACGCCACCTCTTGTaGCATAGGTCATTGGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ATSCDIGHWSSRWNATEVTRHLL*HRSLVK Trigger: CTTGACCAATGACCTATGTCACAAGAGGTGGCGTGT...AACCTCTGTAGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
||
| CDS-3UTR TCA 90 bp | TCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTACACGCCACCTCTTGTaGCATAGGTCATTGGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLHATSCDIGHWSSRWNATRHLL*HRSLVK Trigger: CTTGACCAATGACCTATGTCACAAGAGGTGGCGTGT...AGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
||
| CDS-3UTR TCA 90 bp | TCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTACTAAGCATAAGAGGTaGGAACGTACACTGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLHATSCDIGHWSSRWNATKHKR*ERTLQG Trigger: GCCCTGCAGTGTACGTTCTCACCTCTTATGCTTAGT...AGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR GCA 90 bp | TCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTCACCAGCAGCAGCTGTaGACTGATGTTAAAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLHATSCDIGHWSSRWNAHQQQL*TDVKTG Trigger: GCCAGTTTTAACATCAGTGCACAGCTGCTGCTGGTG...AGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR GCA 90 bp | GCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTACAGAGGTTCACCAGCAGCAGCTGTaGACTGATGTTAAAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ATSCDIGHWSSRWNATEVHQQQL*TDVKTG Trigger: GCCAGTTTTAACATCAGTGCACAGCTGCTGCTGGTG...AACCTCTGTAGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR CCA 90 bp | TTCAGAGAGCCAGCCAACTTCGTGGACCCTTTCATGCTCAAACTACTAGAGGTGGGATGTCCTTGGCCATaGCTGTTTCCCATCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FREPANFVDPFMLKLLEVGCPWP*LFPIQV Trigger: AACCTGGATGGGAAACAGCCATGGCCAAGGACATCC...CACCTCTAGTAGTTTGAGCATGAAAGGGTCCACGAAGTTGGCTGGCTCTCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578122.5 |
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| CDS-3UTR CCA 90 bp | CATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGGATGTCCTTGGCCATaGCTGTTTCCCATCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HSLHATSCDIGHWSSRWNGCPWP*LFPIQV Trigger: AACCTGGATGGGAAACAGCCATGGCCAAGGACATCC...ATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 |
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| CDS-3UTR CCA 90 bp | GGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCCATTGGTCAAGCCGCTaGAATGCTACAGAGGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLHSLHATSCDIGHWSSRHWSSR*NATEVF Trigger: AAAAACCTCTGTAGCATTCCAGCGGCTTGACCAATG...GCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR CCA 90 bp | CAACTAAGCATAAGAGGTGAGAACGTACACTGCAGGGCCACCAGCAGCAGCTGTTGTGACATAGGTCATTaGTCAAGCCGCTGGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLSIRGENVHCRATSSSCCDIGH*SSRWNA Trigger: AGCATTCCAGCGGCTTGACCAATGACCTATGTCACA...ACAGCTGCTGCTGGTGGCCCTGCAGTGTACGTTCTCACCTCTTATGCTTAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR GCA 90 bp | CACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTACAGAGAGAATAAAGTCCGCTTaGTTGTCACAGGCATCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HATSCDIGHWSSRWNATERIKSA*LSQASF Trigger: GAACGATGCCTGTGACAAGCAAGCGGACTTTATTCT...CTCTGTAGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585089.5 |
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| CDS-3UTR GCA 90 bp | CATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATCACCAGCAGCAGCTGTaGACTGATGTTAAAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HSLHATSCDIGHWSSRWNHQQQL*TDVKTG Trigger: GCCAGTTTTAACATCAGTGCACAGCTGCTGCTGGTG...ATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR CCA 90 bp | AGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCATTGGTCAAGCCGCTaGAATGCTACAGAGGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RGLHSLHATSCDIGHWSSHWSSR*NATEVF Trigger: AAAAACCTCTGTAGCATTCCAGCGGCTTGACCAATG...GCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR CCA 90 bp | CACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTACAGAGCATTGGTCAAGCCGCTaGAATGCTACAGAGGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HATSCDIGHWSSRWNATEHWSSR*NATEVF Trigger: AAAAACCTCTGTAGCATTCCAGCGGCTTGACCAATG...CTCTGTAGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR CCA 90 bp | TCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTTGTGACATAGGTCATTaGTCAAGCCGCTGGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLHATSCDIGHWSSRWNACDIGH*SSRWNA Trigger: AGCATTCCAGCGGCTTGACCAATGACCTATGTCACA...AGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR CCA 90 bp | TTCAGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCATGTGACATAGGTCATTaGTCAAGCCGCTGGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRGLHSLHATSCDIGHWSCDIGH*SSRWNA Trigger: AGCATTCCAGCGGCTTGACCAATGACCTATGTCACA...TGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR TCA 90 bp | AGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCTCAACACACATTTCTTaGGTGCCTACTACATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGLHSLHATSCDIGHWSSSTHIS*VPTTCQ Trigger: TTGGCATGTAGTAGGCACTCAAGAAATGTGTGTTGA...GCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585089.5 |
||
| CDS-3UTR TCA 90 bp | CACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTACAGAGCCACCAACTATTTTCTaGAACTGGCCAATTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HATSCDIGHWSSRWNATEPPTIF*NWPILS Trigger: GGACAAAATTGGCCAGTTTCAGAAAATAGTTGGTGG...CTCTGTAGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR TCA 90 bp | CAACTAAGCATAAGAGGTGAGAACGTACACTGCAGGGCCACCAGCAGCAGCTGTCCACCAACTATTTTCTaGAACTGGCCAATTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLSIRGENVHCRATSSSCPPTIF*NWPILS Trigger: GGACAAAATTGGCCAGTTTCAGAAAATAGTTGGTGG...ACAGCTGCTGCTGGTGGCCCTGCAGTGTACGTTCTCACCTCTTATGCTTAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
||
| CDS-3UTR TCA 90 bp | AGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCCACCAACTATTTTCTaGAACTGGCCAATTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGLHSLHATSCDIGHWSSPPTIF*NWPILS Trigger: GGACAAAATTGGCCAGTTTCAGAAAATAGTTGGTGG...GCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
||
| CDS-3UTR GCA 90 bp | CAACTAAGCATAAGAGGTGAGAACGTACACTGCAGGGCCACCAGCAGCAGCTGTTGTCCACAAAGTCTTTaGACTCTTCCTTCAGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QLSIRGENVHCRATSSSCCPQSL*TLPSAL Trigger: TAGAGCTGAAGGAAGAGTGCAAAGACTTTGTGGACA...ACAGCTGCTGCTGGTGGCCCTGCAGTGTACGTTCTCACCTCTTATGCTTAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
||
| CDS-3UTR GCA 90 bp | AGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCTGTCCACAAAGTCTTTaGACTCTTCCTTCAGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RGLHSLHATSCDIGHWSSCPQSL*TLPSAL Trigger: TAGAGCTGAAGGAAGAGTGCAAAGACTTTGTGGACA...GCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
||
| CDS-3UTR GCA 90 bp | CACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTACAGAGTGTCCACAAAGTCTTTaGACTCTTCCTTCAGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: HATSCDIGHWSSRWNATECPQSL*TLPSAL Trigger: TAGAGCTGAAGGAAGAGTGCAAAGACTTTGTGGACA...CTCTGTAGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
||
| CDS-3UTR CCA 90 bp | TTCAGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCACATTGGTCAAGCCGCTaGAATGCTACAGAGGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FRGLHSLHATSCDIGHWSHWSSR*NATEVF Trigger: AAAAACCTCTGTAGCATTCCAGCGGCTTGACCAATG...TGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
||
| CDS-3UTR CCA 90 bp | TCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTCATTGGTCAAGCCGCTaGAATGCTACAGAGGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLHATSCDIGHWSSRWNAHWSSR*NATEVF Trigger: AAAAACCTCTGTAGCATTCCAGCGGCTTGACCAATG...AGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
||
| CDS-3UTR CCA 90 bp | CATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATTGTGACATAGGTCATTaGTCAAGCCGCTGGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSLHATSCDIGHWSSRWNCDIGH*SSRWNA Trigger: AGCATTCCAGCGGCTTGACCAATGACCTATGTCACA...ATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR CCA 90 bp | AGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCAGTTCCGAGCACCGATaGCCTTCATCTTTTCATTTT | + |
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Preference number: 4 (lower is better) Translates to: RGLHSLHATSCDIGHWSSSSEHR*PSSFHF Trigger: AAAATGAAAAGATGAAGGCCATCGGTGCTCGGAACT...GCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000395418.8 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 |
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| CDS-3UTR CCA 90 bp | CAACTAAGCATAAGAGGTGAGAACGTACACTGCAGGGCCACCAGCAGCAGCTGTAGTTCCGAGCACCGATaGCCTTCATCTTTTCATTTT | + |
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Preference number: 4 (lower is better) Translates to: QLSIRGENVHCRATSSSCSSEHR*PSSFHF Trigger: AAAATGAAAAGATGAAGGCCATCGGTGCTCGGAACT...ACAGCTGCTGCTGGTGGCCCTGCAGTGTACGTTCTCACCTCTTATGCTTAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000395418.8 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 |
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| CDS-3UTR TCA 90 bp | GCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTACAGAGGTTCCACCAACTATTTTCTaGAACTGGCCAATTTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: ATSCDIGHWSSRWNATEVPPTIF*NWPILS Trigger: GGACAAAATTGGCCAGTTTCAGAAAATAGTTGGTGG...AACCTCTGTAGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR GCA 90 bp | TTCAGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCATGTCCACAAAGTCTTTaGACTCTTCCTTCAGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: FRGLHSLHATSCDIGHWSCPQSL*TLPSAL Trigger: TAGAGCTGAAGGAAGAGTGCAAAGACTTTGTGGACA...TGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR GCA 90 bp | TCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATGCTTGTCCACAAAGTCTTTaGACTCTTCCTTCAGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: SLHATSCDIGHWSSRWNACPQSL*TLPSAL Trigger: TAGAGCTGAAGGAAGAGTGCAAAGACTTTGTGGACA...AGCATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR CCA 90 bp | CATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATCATTGGTCAAGCCGCTaGAATGCTACAGAGGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSLHATSCDIGHWSSRWNHWSSR*NATEVF Trigger: AAAAACCTCTGTAGCATTCCAGCGGCTTGACCAATG...ATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR TCA 90 bp | AGAGCCAGCCAACTTCGTGGACCCTTTCATGCTCAAACTACTAGAGGTGGTTTGTCAACACACATTTCTTaGGTGCCTACTACATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RASQLRGPFHAQTTRGGLSTHIS*VPTTCQ Trigger: TTGGCATGTAGTAGGCACTCAAGAAATGTGTGTTGA...CAAACCACCTCTAGTAGTTTGAGCATGAAAGGGTCCACGAAGTTGGCTGGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578122.5 |
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| CDS-3UTR TCA 90 bp | AAATCTCCAGCCCTAGGAAAGTCTTCTTTCAGAGAGCCAGCCAACTTCGTGGACCCACCAACTATTTTCTaGAACTGGCCAATTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSPALGKSSFREPANFVDPPTIF*NWPILS Trigger: GGACAAAATTGGCCAGTTTCAGAAAATAGTTGGTGG...GTCCACGAAGTTGGCTGGCTCTCTGAAAGAAGACTTTCCTAGGGCTGGAGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000578122.5 |
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| CDS-3UTR TCA 90 bp | CATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATCCACCAACTATTTTCTaGAACTGGCCAATTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSLHATSCDIGHWSSRWNPPTIF*NWPILS Trigger: GGACAAAATTGGCCAGTTTCAGAAAATAGTTGGTGG...ATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS-3UTR GCA 90 bp | GCCAGCCAACTTCGTGGACCCTTTCATGCTCAAACTACTAGAGGTGGTTTGATAAGAATAAAGTCCGCTTaGTTGTCACAGGCATCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASQLRGPFHAQTTRGGLIRIKSA*LSQASF Trigger: GAACGATGCCTGTGACAAGCAAGCGGACTTTATTCT...TATCAAACCACCTCTAGTAGTTTGAGCATGAAAGGGTCCACGAAGTTGGCTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578122.5 |
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| CDS-3UTR CCA 90 bp | CATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATAGTTCCGAGCACCGATaGCCTTCATCTTTTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSLHATSCDIGHWSSRWNSSEHR*PSSFHF Trigger: AAAATGAAAAGATGAAGGCCATCGGTGCTCGGAACT...ATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000395418.8 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 |
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| CDS-3UTR GCA 90 bp | AGTCTTCTTTCAGAGAGCCAGCCAACTTCGTGGACCCTTTCATGCTCAAACTACTGTCCACAAAGTCTTTaGACTCTTCCTTCAGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLLSESQPTSWTLSCSNYCPQSL*TLPSAL Trigger: TAGAGCTGAAGGAAGAGTGCAAAGACTTTGTGGACA...GTAGTTTGAGCATGAAAGGGTCCACGAAGTTGGCTGGCTCTCTGAAAGAAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578122.5 |
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| CDS-3UTR CCA 90 bp | GGAAAGTCTTCTTTCAGAGAGCCAGCCAACTTCGTGGACCCTTTCATGCTCAAAAGTTCCGAGCACCGATaGCCTTCATCTTTTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: GKSSFREPANFVDPFMLKSSEHR*PSSFHF Trigger: AAAATGAAAAGATGAAGGCCATCGGTGCTCGGAACT...TTTGAGCATGAAAGGGTCCACGAAGTTGGCTGGCTCTCTGAAAGAAGACTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000578122.5 |
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| 3UTR CAA 72 bp | CGTGGACCCTTTCATGCTCAAACTACTAGAGGTGGTTaGATATTAACAAGTTTTCTATTTCCTTCCCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGPFHAQTTRGG*ILTSFLFPSHQ Trigger: TTGATGGGAAGGAAATAGAAAACTTGTTAATATCAAACCACCTCTAGTAGTTTGAGCATGAAAGGGTCCACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578122.5 |
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| CDS-3UTR TCA 90 bp | GGACCCTTTCATGCTCAAACTACTAGAGGTGGTTTGATATTAACAAGTTTTCTAATCTTCAAATCAGGATaGCAAGTGAGATGCTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPFHAQTTRGGLILTSFLIFKSG*QVRCYS Trigger: GGAATAGCATCTCACTTGTCATCCTGATTTGAAGAT...TAGAAAACTTGTTAATATCAAACCACCTCTAGTAGTTTGAGCATGAAAGGGTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578122.5 |
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| CDS TCA 90 bp | CTAGATGCTGGGGGTACAAAGATGAATGCAACACGGTGCCCGCCCTaGAGAGCACATAGTTCAGCTGCCGGCCCCGCGGCGGCAGCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LDAGGTKMNATRCPP*RAHSSAAGPAAAAR Trigger: GCGCGCTGCCGCCGCGGGGCCGGCAGCTGAACTATGTGCTCTTCAGGGCGGGCACCGTGTTGCATTCATCTTTGTACCCCCAGCATCTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000322326.12 ENST00000578122.5 ENST00000578547.1 ENST00000578985.5 ENST00000585089.5 |
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| CDS-3UTR CAA 90 bp | GGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTCACCCAGGATGTCCTaGGCCATGGCTGCCGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLHSLHATSCDIGHWSSRSPRMS*AMAAGP Trigger: GGGGCCGGCAGCCATGGCCAAGGACATCCTGGGTGA...GCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000588477.5 |
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| CDS CCA 90 bp | GGGACACATGAGAGCACAAGAGGGCAGACAGAAAAGGGTGGCACGTaGGAACTCACAGACGCCAGATTCAACCTCCAGGGAGCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GTHESTRGQTEKGGT*ELTDARFNLQGASS Trigger: GCTGCTGGCTCCCTGGAGGTTGAATCTGGCGTCTGTGAGTTCCCACGTGCCACCCTTTTCTGTCTGCCCTCTTGTGCTCTCATGTGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000578547.1 ENST00000580357.1 ENST00000580991.1 |
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| CDS CCA 90 bp | ATGCAACACGGTGCCCGCCCTGAAGAGCACATAGTTCAGCTGAATTaGGAATCAAAGTTGGGTCATTCTCTTCCTGCCGGCCCCGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: MQHGARPEEHIVQLN*ESKLGHSLPAGPAA Trigger: CGCCGCGGGGCCGGCAGGAAGAGAATGACCCAACTTTGATTCCCAATTCAGCTGAACTATGTGCTCTTCAGGGCGGGCACCGTGTTGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577498.1 |
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| CDS-3UTR CAA 90 bp | CATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTGGAATTCACCCAGGATGTCCTaGGCCATGGCTGCCGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: HSLHATSCDIGHWSSRWNSPRMS*AMAAGP Trigger: GGGGCCGGCAGCCATGGCCAAGGACATCCTGGGTGA...ATTCCAGCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000588477.5 |
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| CDS CCA 90 bp | GCTCCACTGTGGCAGGGCCAAGATGAGCCTGGGGTACAGTTGAAATaGCAGCTCAAAGCTGAGTGGCACTGTATCTCCCCAATACTCACT | + |
|
Preference number: 5 (lower is better) Translates to: APLWQGQDEPGVQLK*QLKAEWHCISPILT Trigger: AGTGAGTATTGGGGAGATACAGTGCCACTCAGCTTTGAGCTGCCATTTCAACTGTACCCCAGGCTCATCTTGGCCCTGCCACAGTGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000578547.1 ENST00000580357.1 ENST00000580991.1 |
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| CDS-3UTR CAA 90 bp | GGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCAGGTGGGAGAATCGCTaGAATCTGAGAGGCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GLHSLHATSCDIGHWSSRRWENR*NLRGRA Trigger: AGCTCTGCCTCTCAGATTCAAGCGATTCTCCCACCT...GCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357896.7 |
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| CDS-3UTR CAA 90 bp | GGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCATAAAGTCCGCTTGCTaGTCACAGGCATCGTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: GLHSLHATSCDIGHWSSRIKSAC*SQASFI Trigger: AATGAACGATGCCTGTGACAAGCAAGCGGACTTTAT...GCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585089.5 |
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| CDS-3UTR CAA 90 bp | GGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCCGCTTGTCCACAAAGTCTTaGCACTCTTCCTTCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLHSLHATSCDIGHWSSRLSTKS*HSSFSS Trigger: AGAGCTGAAGGAAGAGTGCAAAGACTTTGTGGACAA...GCGGCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000357896.7 ENST00000395418.8 ENST00000578009.5 ENST00000579419.5 ENST00000585089.5 ENST00000585313.5 ENST00000588477.5 |
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| CDS TCA 90 bp | CTAGATGCTGGGGGTACAAAGATGAATGCAACACGGTGCCCGCCCTaGAGAGCACATAGTTCAGCTGAATTGGGAATCAAAGTTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LDAGGTKMNATRCPP*RAHSSAELGIKVGS Trigger: TGACCCAACTTTGATTCCCAATTCAGCTGAACTATGTGCTCTTCAGGGCGGGCACCGTGTTGCATTCATCTTTGTACCCCCAGCATCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000577498.1 |
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| CDS CCA 90 bp | CAAGATGAGCCTGGGGTACAGTTGAAATGGCAGCTCAAAGCTGAGTaGCACTGTATCTCCCCAATACTCACTGTCCACAAAGTCTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QDEPGVQLKWQLKAE*HCISPILTVHKVFA Trigger: TGCAAAGACTTTGTGGACAGTGAGTATTGGGGAGATACAGTGCCACTCAGCTTTGAGCTGCCATTTCAACTGTACCCCAGGCTCATCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000578547.1 ENST00000580357.1 ENST00000580991.1 |
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| CDS CCA 90 bp | GGCCATGGCTTCATTAAAACCATCTACAGCATCAAGTCCTCAAAGTaGGGAGGGGTTATCTGGGAGCTGTGTCAGTCTTCAGAGAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GHGFIKTIYSIKSSK*GGVIWELCQSSERK Trigger: TTTCCTCTCTGAAGACTGACACAGCTCCCAGATAACCCCTCCCCACTTTGAGGACTTGATGCTGTAGATGGTTTTAATGAAGCCATGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000583796.1 |
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| CDS-3UTR CAA 90 bp | AGGGGGCTGCATTCCTTACACGCCACCTCTTGTGACATAGGTCATTGGTCAAGCTTCAACACACATTTCTaGAGTGCCTACTACATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RGLHSLHATSCDIGHWSSFNTHF*SAYYMP Trigger: TGGCATGTAGTAGGCACTCAAGAAATGTGTGTTGAA...GCTTGACCAATGACCTATGTCACAAGAGGTGGCGTGTAAGGAATGCAGCCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585089.5 |
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| CDS-3UTR CAA 90 bp | GAGAAATCTCCAGCCCTAGGAAAGTCTTCTTTCAGAGAGCCAGCCAACTTCGTGATAAAGTCCGCTTGCTaGTCACAGGCATCGTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: EKSPALGKSSFREPANFVIKSAC*SQASFI Trigger: AATGAACGATGCCTGTGACAAGCAAGCGGACTTTAT...CACGAAGTTGGCTGGCTCTCTGAAAGAAGACTTTCCTAGGGCTGGAGATTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578122.5 |
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| CDS TCA 90 bp | CATGGTTGTGTTCCCAGAAAGTTTAAGGTTTCTAAGAGCAAGAAATaGAAGATGGCATATCTAAAGACACCCTCCCCTCCCCATCCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: HGCVPRKFKVSKSKK*KMAYLKTPSPPHPG Trigger: ACCGGGATGGGGAGGGGAGGGTGTCTTTAGATATGCCATCTTTCATTTCTTGCTCTTAGAAACCTTAAACTTTCTGGGAACACAACCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000578547.1 ENST00000580357.1 |
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| CDS-3UTR CAA 90 bp | AGTCTTCTTTCAGAGAGCCAGCCAACTTCGTGGACCCTTTCATGCTCAAACTACTTCAACACACATTTCTaGAGTGCCTACTACATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLLSESQPTSWTLSCSNYFNTHF*SAYYMP Trigger: TGGCATGTAGTAGGCACTCAAGAAATGTGTGTTGAA...GTAGTTTGAGCATGAAAGGGTCCACGAAGTTGGCTGGCTCTCTGAAAGAAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578122.5 |
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| CDS TCA 90 bp | AGAGAACCTGCCCCTGAGAAGACTTTCTCTGAAGAAATCAAATCATaGGTACATAATTCTATTTCCCACACCCAAGCCATGGTTGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: REPAPEKTFSEEIKS*VHNSISHTQAMVVF Trigger: GAACACAACCATGGCTTGGGTGTGGGAAATAGAATTATGTACTCATGATTTGATTTCTTCAGAGAAAGTCTTCTCAGGGGCAGGTTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578547.1 ENST00000580357.1 |
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| CDS TCA 72 bp | GGGGGTACAAAGATGAATGCAACACGGTGCCCGCCCTaGAGAGCACATAGTTCAGCTGCCGGCCCCGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GGTKMNATRCPP*RAHSSAAGPAA Trigger: CGCCGCGGGGCCGGCAGCTGAACTATGTGCTCTTCAGGGCGGGCACCGTGTTGCATTCATCTTTGTACCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000322326.12 ENST00000578122.5 ENST00000578547.1 ENST00000578985.5 ENST00000585089.5 |
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| CDS CCA 72 bp | GAGAGCACAAGAGGGCAGACAGAAAAGGGTGGCACGTaGGAACTCACAGACGCCAGATTCAACCTCCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ESTRGQTEKGGT*ELTDARFNLQG Trigger: TCCCTGGAGGTTGAATCTGGCGTCTGTGAGTTCCCACGTGCCACCCTTTTCTGTCTGCCCTCTTGTGCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000578547.1 ENST00000580357.1 ENST00000580991.1 |
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| CDS CCA 72 bp | TGGCAGGGCCAAGATGAGCCTGGGGTACAGTTGAAATaGCAGCTCAAAGCTGAGTGGCACTGTATCTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: WQGQDEPGVQLK*QLKAEWHCISP Trigger: TGGGGAGATACAGTGCCACTCAGCTTTGAGCTGCCATTTCAACTGTACCCCAGGCTCATCTTGGCCCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000578547.1 ENST00000580357.1 ENST00000580991.1 |
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| CDS CAA 72 bp | CCACTGTGGCAGGGCCAAGATGAGCCTGGGGTACAGTaGAAATGGCAGCTCAAAGCTGAGTGGCACTGTATC | + |
|
Preference number: 6 (lower is better) Translates to: PLWQGQDEPGVQ*KWQLKAEWHCI Trigger: GATACAGTGCCACTCAGCTTTGAGCTGCCATTTCAACTGTACCCCAGGCTCATCTTGGCCCTGCCACAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000578547.1 ENST00000580357.1 ENST00000580991.1 |
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| CDS TCA 72 bp | CACTGTGGCAGGGCCAAGATGAGCCTGGGGTACAGTTaGAATGGCAGCTCAAAGCTGAGTGGCACTGTATCT | + |
|
Preference number: 6 (lower is better) Translates to: HCGRAKMSLGYS*NGSSKLSGTVS Trigger: AGATACAGTGCCACTCAGCTTTGAGCTGCCATTTCAACTGTACCCCAGGCTCATCTTGGCCCTGCCACAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000578547.1 ENST00000580357.1 ENST00000580991.1 |
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| CDS CCA 72 bp | GGTGCCCGCCCTGAAGAGCACATAGTTCAGCTGAATTaGGAATCAAAGTTGGGTCATTCTCTTCCTGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GARPEEHIVQLN*ESKLGHSLPAG Trigger: GCCGGCAGGAAGAGAATGACCCAACTTTGATTCCCAATTCAGCTGAACTATGTGCTCTTCAGGGCGGGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577498.1 |
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| CDS TCA 72 bp | GGGGGTACAAAGATGAATGCAACACGGTGCCCGCCCTaGAGAGCACATAGTTCAGCTGAATTGGGAATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GGTKMNATRCPP*RAHSSAELGIK Trigger: TTTGATTCCCAATTCAGCTGAACTATGTGCTCTTCAGGGCGGGCACCGTGTTGCATTCATCTTTGTACCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000577498.1 |
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| CDS CCA 72 bp | TTCATTAAAACCATCTACAGCATCAAGTCCTCAAAGTaGGGAGGGGTTATCTGGGAGCTGTGTCAGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FIKTIYSIKSSK*GGVIWELCQSS Trigger: TGAAGACTGACACAGCTCCCAGATAACCCCTCCCCACTTTGAGGACTTGATGCTGTAGATGGTTTTAATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000583796.1 |
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| CDS TCA 72 bp | GCCCCTGAGAAGACTTTCTCTGAAGAAATCAAATCATaGGTACATAATTCTATTTCCCACACCCAAGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: APEKTFSEEIKS*VHNSISHTQAM Trigger: CATGGCTTGGGTGTGGGAAATAGAATTATGTACTCATGATTTGATTTCTTCAGAGAAAGTCTTCTCAGGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578547.1 ENST00000580357.1 |
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