RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IFT140 (Homo sapiens)

Ensembl gene IDs: ENSG00000187535

Ensembl transcript IDs: ENST00000361339.9, ENST00000397417.6, ENST00000426508.7, ENST00000439987.6, ENST00000561954.1, ENST00000565298.5, ENST00000566052.1, ENST00000566818.1, ENST00000568837.1, ENST00000569646.5, ENST00000569812.1

Found 799 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCCATGCTGTTGTGGCGGACCTGCTCGGGGACGGTGCGTGGCAGTaGGAGACCCAGCCCCCGGTGCACGGCGTCCACGGCCTGCGGGCT +
Preference number: 1 (lower is better)
Translates to: LHAVVADLLGDGAWQ*ETQPPVHGVHGLRA
Trigger: AGCCCGCAGGCCGTGGACGCCGTGCACCGGGGGCTGGGTCTCCCACTGCCACGCACCGTCCCCGAGCAGGTCCGCCACAACAGCATGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR GCA 90 bp AGTCGGCGCTGGCCTCCAGGTGCCCGGCATAGCGGTGGTAGGTGCTaGGCAGGTGCACGCGATCGTGGTGCTCGGCTACCTGGAGGGCCT +
Preference number: 1 (lower is better)
Translates to: SRRWPPGARHSGGRC*AGARDRGARLPGGP
Trigger: AGGCCCTCCAGGTAGCCGAGCACCACGATCGCGTGCACCTGCGCAGCACCTACCACCGCTATGCCGGGCACCTGGAGGCCAGCGCCGACT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR GCA 90 bp TGCAGTCGGCGCTGGCCTCCAGGTGCCCGGCATAGCGGTGGTAGGTaGTGCGCAGGTGCACGCGATCGTGGTGCTCGGCTACCTGGAGGG +
Preference number: 1 (lower is better)
Translates to: CSRRWPPGARHSGGR*CAGARDRGARLPGG
Trigger: CCCTCCAGGTAGCCGAGCACCACGATCGCGTGCACCTGCGCAGCACCTACCACCGCTATGCCGGGCACCTGGAGGCCAGCGCCGACTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR TCA 90 bp GCCGCAGGGCCAGCGCGCCCATCTTGGGGCTGCCCGTTTGCAGACTaGGGCTGGGAGCGCGGCGTCTCCTGCACGGCTTCGCATACAAAC +
Preference number: 1 (lower is better)
Translates to: AAGPARPSWGCPFAD*GWERGVSCTASHTN
Trigger: GTTTGTATGCGAAGCCGTGCAGGAGACGCCGCGCTCCCAGCCTCAGTCTGCAAACGGGCAGCCCCAAGATGGGCGCGCTGGCCCTGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR GCA 90 bp AACATCTGCCGCAGGGCCAGCGCGCCCATCTTGGGGCTGCCCGTTTaGAGACTGAGGCTGGGAGCGCGGCGTCTCCTGCACGGCTTCGCA +
Preference number: 1 (lower is better)
Translates to: NICRRASAPILGLPV*RLRLGARRLLHGFA
Trigger: TGCGAAGCCGTGCAGGAGACGCCGCGCTCCCAGCCTCAGTCTGCAAACGGGCAGCCCCAAGATGGGCGCGCTGGCCCTGCGGCAGATGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR GCA 90 bp AATTACAGGAGTGTTGGTGGCCGGTGGGCAGAGCCTAGCAGGGGGTaGAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCG +
Preference number: 1 (lower is better)
Translates to: NYRSVGGRWAEPSRG*SRQGPGVPAVAQEP
Trigger: CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCTCTGCCCACCGGCCACCAACACTCCTGTAATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR CCA 90 bp AGGGGTCGTCATCTGCCTCTTCCACCACCTCCTCGTCCAGCTCCCTaGCGTCCTCCATGCTGTTGTGGCGGACCTGCTCGGGGACGGTGC +
Preference number: 1 (lower is better)
Translates to: RGRHLPLPPPPRPAP*RPPCCCGGPARGRC
Trigger: GCACCGTCCCCGAGCAGGTCCGCCACAACAGCATGGAGGACGCCAGGGAGCTGGACGAGGAGGTGGTGGAAGAGGCAGATGACGACCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR GCA 90 bp CTTCTTGGTGGCCAGGTGGTAGCTGCCCTGGCGCATGCAGCAGTCTaGTATCTGCTCCAGCAGCTCCCGCCGCGACTCCTCAGGCAGGTC +
Preference number: 1 (lower is better)
Translates to: LLGGQVVAALAHAAV*YLLQQLPPRLLRQV
Trigger: GACCTGCCTGAGGAGTCGCGGCGGGAGCTGCTGGAGCAGATAGCAGACTGCTGCATGCGCCAGGGCAGCTACCACCTGGCCACCAAGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 90 bp TGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTaGGCCCTGCAGGAGTATGGGGAGGATATGATGTGTGGGGAGCAG +
Preference number: 1 (lower is better)
Translates to: CSRQGPGVPAVAQEP*ALQEYGEDMMCGEQ
Trigger: CTGCTCCCCACACATCATATCCTCCCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR CCA 90 bp GGTGCACGGCGTCCACGGCCTGCGGGCTCACGTAGTAGGACATGTTaGCCAAGGGAAGCCGCCGCCGCATCTCCTCCAGGAATCTGTAGG +
Preference number: 1 (lower is better)
Translates to: GARRPRPAGSRSRTC*PREAAAASPPGICR
Trigger: CCTACAGATTCCTGGAGGAGATGCGGCGGCGGCTTCCCTTGGCCAACATGTCCTACTACGTGAGCCCGCAGGCCGTGGACGCCGTGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR TCA 90 bp GCTGGTCGTCCAGGCCGTTCTCCTTGCACAGGCGGATGGCATTCTTaGAGGCCTGTGCCCGGGTGTAGAAGTGCACCGCCTGCCCGACCT +
Preference number: 1 (lower is better)
Translates to: AGRPGRSPCTGGWHS*RPVPGCRSAPPARP
Trigger: AGGTCGGGCAGGCGGTGCACTTCTACACCCGGGCACAGGCCTTCAAGAATGCCATCCGCCTGTGCAAGGAGAACGGCCTGGACGACCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR GCA 90 bp AGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTaGGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGTT +
Preference number: 1 (lower is better)
Translates to: RARCRRVTPSAGPGR*VLAQLCRVFQHRHV
Trigger: AACATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR GCA 90 bp CAGGCCGTTCTCCTTGCACAGGCGGATGGCATTCTTGAAGGCCTGTaGCCGGGTGTAGAAGTGCACCGCCTGCCCGACCTCCTCCTGGCT +
Preference number: 1 (lower is better)
Translates to: QAVLLAQADGILEGL*PGVEVHRLPDLLLA
Trigger: AGCCAGGAGGAGGTCGGGCAGGCGGTGCACTTCTACACCCGGGCACAGGCCTTCAAGAATGCCATCCGCCTGTGCAAGGAGAACGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR GCA 90 bp CCTGCGTGTACTTCTTGGTGGCCAGGTGGTAGCTGCCCTGGCGCATaGAGCAGTCTGCTATCTGCTCCAGCAGCTCCCGCCGCGACTCCT +
Preference number: 1 (lower is better)
Translates to: PACTSWWPGGSCPGA*SSLLSAPAAPAATP
Trigger: AGGAGTCGCGGCGGGAGCTGCTGGAGCAGATAGCAGACTGCTGCATGCGCCAGGGCAGCTACCACCTGGCCACCAAGAAGTACACGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR TCA 90 bp CCGCCTCGATCATGTCCTCGGGGGAGCTCAGCAGGGCCAAGTTCATaGGCTGGTCGTCCAGGCCGTTCTCCTTGCACAGGCGGATGGCAT +
Preference number: 1 (lower is better)
Translates to: PPRSCPRGSSAGPSS*AGRPGRSPCTGGWH
Trigger: ATGCCATCCGCCTGTGCAAGGAGAACGGCCTGGACGACCAGCTCATGAACTTGGCCCTGCTGAGCTCCCCCGAGGACATGATCGAGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR TCA 90 bp CAGCCAGCAGCAGCTCTACCGCCCTCTCGTACTGACTGTGCTCGATaGAGAAGTCGGAGCAGCGGGCCAGGAGCGCAGGGTCTGACGTCT +
Preference number: 1 (lower is better)
Translates to: QPAAALPPSRTDCAR*RSRSSGPGAQGLTS
Trigger: AGACGTCAGACCCTGCGCTCCTGGCCCGCTGCTCCGACTTCTTCATCGAGCACAGTCAGTACGAGAGGGCGGTAGAGCTGCTGCTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR GCA 90 bp ACCGGCCCGCAGCCTGGTAGAACTTGTTCAGGAGGTCGTGGCGCTTaGACTTCCTGTACAGCTGCTCGGCGTCCTCCTTGGCCACGTCCA +
Preference number: 1 (lower is better)
Translates to: TGPQPGRTCSGGRGA*TSCTAARRPPWPRP
Trigger: TGGACGTGGCCAAGGAGGACGCCGAGCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCCTGAACAAGTTCTACCAGGCTGCGGGCCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 90 bp GCGCCCTCATGGCCTTCAGCTTGTTGCCGGCCTGCGTGTACTTCTTaGTGGCCAGGTGGTAGCTGCCCTGGCGCATGCAGCAGTCTGCTA +
Preference number: 1 (lower is better)
Translates to: APSWPSACCRPACTS*WPGGSCPGACSSLL
Trigger: TAGCAGACTGCTGCATGCGCCAGGGCAGCTACCACCTGGCCACCAAGAAGTACACGCAGGCCGGCAACAAGCTGAAGGCCATGAGGGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR TCA 90 bp TGGTGCTGTCCAGGTCTGGTTCCTCCAGGAGCAGCTCACACTGCTTaGTGGACTCCTTGGGGTCCTCTGTGTACGTCCTGCGGGCCTGGA +
Preference number: 1 (lower is better)
Translates to: WCCPGLVPPGAAHTA*WTPWGPLCTSCGPG
Trigger: TCCAGGCCCGCAGGACGTACACAGAGGACCCCAAGGAGTCCATCAAGCAGTGTGAGCTGCTCCTGGAGGAACCAGACCTGGACAGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 90 bp CCCTCATGGCCTTCAGCTTGTTGCCGGCCTGCGTGTACTTCTTGGTaGCCAGGTGGTAGCTGCCCTGGCGCATGCAGCAGTCTGCTATCT +
Preference number: 1 (lower is better)
Translates to: PSWPSACCRPACTSW*PGGSCPGACSSLLS
Trigger: AGATAGCAGACTGCTGCATGCGCCAGGGCAGCTACCACCTGGCCACCAAGAAGTACACGCAGGCCGGCAACAAGCTGAAGGCCATGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR TCA 90 bp AGATTTTGGAATCAGGGCTGTTGTCAGCCTTGCTGGGGAGGATGCTaGTGGTGCTCCCGCTGCTGCTGCACCGCAGAGAAGCGATGCCCC +
Preference number: 1 (lower is better)
Translates to: RFWNQGCCQPCWGGC*WCSRCCCTAEKRCP
Trigger: GGGGCATCGCTTCTCTGCGGTGCAGCAGCAGCGGGAGCACCATCAGCATCCTCCCCAGCAAGGCTGACAACAGCCCTGATTCCAAAATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR TCA 90 bp GCCGGGGGAAGCTCTCATGAAGCAGGAAGCCGTGCTCTTCGGAAATaGAGAAGGACAGGATCAAAACATCTGCCGCAGGGCCAGCGCGCC +
Preference number: 1 (lower is better)
Translates to: AGGSSHEAGSRALRK*RRTGSKHLPQGQRA
Trigger: GGCGCGCTGGCCCTGCGGCAGATGTTTTGATCCTGTCCTTCTTCATTTCCGAAGAGCACGGCTTCCTGCTTCATGAGAGCTTCCCCCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR GCA 90 bp GACGTCTCATCCAGGTCCTCTGCTATGAGCTGTAGGGCCACAAACTaGTGGGTGGCAAAGGCCAGCTCCAGGGCCTTGGAGAAGTGGCCA +
Preference number: 1 (lower is better)
Translates to: DVSSRSSAMSCRATN*WVAKASSRALEKWP
Trigger: TGGCCACTTCTCCAAGGCCCTGGAGCTGGCCTTTGCCACCCAGCAGTTTGTGGCCCTACAGCTCATAGCAGAGGACCTGGATGAGACGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 90 bp CAGGAAGCCATAGACGTCCCCGATGCGGATGGTGCTGTCCAGGTCTaGTTCCTCCAGGAGCAGCTCACACTGCTTGATGGACTCCTTGGG +
Preference number: 1 (lower is better)
Translates to: QEAIDVPDADGAVQV*FLQEQLTLLDGLLG
Trigger: CCCAAGGAGTCCATCAAGCAGTGTGAGCTGCTCCTGGAGGAACCAGACCTGGACAGCACCATCCGCATCGGGGACGTCTATGGCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR TCA 90 bp ATCCCCAGGAGACTGTGGGAGGTGGCAGGCCGGGGGAAGCTCTCATaGAGCAGGAAGCCGTGCTCTTCGGAAATGAAGAAGGACAGGATC +
Preference number: 1 (lower is better)
Translates to: IPRRLWEVAGRGKLS*SRKPCSSEMKKDRI
Trigger: GATCCTGTCCTTCTTCATTTCCGAAGAGCACGGCTTCCTGCTTCATGAGAGCTTCCCCCGGCCTGCCACCTCCCACAGTCTCCTGGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 90 bp TTGAAGGCTTCGTCCATGTCTCCTATGGTGACAAAGAAGCTGAAGTaGAGCATGGCGTCCCGGGTGGCCTTGTCGCAGTCCTCCAGCCCC +
Preference number: 1 (lower is better)
Translates to: LKASSMSPMVTKKLK*SMASRVALSQSSSP
Trigger: GGGGCTGGAGGACTGCGACAAGGCCACCCGGGACGCCATGCTCCACTTCAGCTTCTTTGTCACCATAGGAGACATGGACGAAGCCTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 90 bp GAAAATAAACTGCTTTATTGGAATTACAGGAGTGTTGGTGGCCGGTaGGCAGAGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTC +
Preference number: 1 (lower is better)
Translates to: ENKLLYWNYRSVGGR*AEPSRGCSRQGPGV
Trigger: GACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCTCTGCCCACCGGCCACCAACACTCCTGTAATTCCAATAAAGCAGTTTATTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR TCA 90 bp CAGTGTGCTTTGGCCTCTCTTCGGGAAAGATCAAAGCTTTTAAAGTaGGCCAAGTCTGTCCCTACAACCAGGAAATTCCCACAGATGTCC +
Preference number: 1 (lower is better)
Translates to: QCALASLRERSKLLK*AKSVPTTRKFPQMS
Trigger: GGACATCTGTGGGAATTTCCTGGTTGTAGGGACAGACTTGGCTCACTTTAAAAGCTTTGATCTTTCCCGAAGAGAGGCCAAAGCACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 90 bp CTAGAAGTTTCTCAGGCTTTACAATGTGTAGTTGGGAGAATACGATaGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAAT +
Preference number: 1 (lower is better)
Translates to: LEVSQALQCVVGRIR*KGEPDSLQRNESKN
Trigger: ATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAACTACACATTGTAAAGCCTGAGAAACTTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR-3UTR CCA 90 bp CGGCGCTGGCCTCCAGGTGCCCGGCATAGCGGTGGTAGGTGCTGCGCAGGTGCAGCTCGGCGTCCTCCTTaGCCACGTCCAGCCGCTGGG +
Preference number: 2 (lower is better)
Translates to: RRWPPGARHSGGRCCAGAARRPP*PRPAAG
Trigger: CCCAGCGGCTGGACGTGGCCAAGGAGGACGCCGAGC...TGCACCTGCGCAGCACCTACCACCGCTATGCCGGGCACCTGGAGGCCAGCGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR TCA 90 bp GCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCTGCTGGGGAGGATGCTaGTGGTGCTCCCGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: AAAKARVSQLLLRSRGPCCWGGC*WCSRCC
Trigger: GCAGCAGCGGGAGCACCATCAGCATCCTCCCCAGCA...GCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CCA 90 bp TGCTCGGCGTCCTCCTTGGCCACGTCCAGCCGCTGGGTCTTCACGCACATGCGCATCCCCAGGAGACTGTaGGAGGTGGCAGGCCGGGGG +
Preference number: 2 (lower is better)
Translates to: CSASSLATSSRWVFTHMRIPRRL*EVAGRG
Trigger: CCCCCGGCCTGCCACCTCCCACAGTCTCCTGGGGAT...GCGCATGTGCGTGAAGACCCAGCGGCTGGACGTGGCCAAGGAGGACGCCGAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR GCA 90 bp CAGCTCCCTGGCGTCCTCCATGCTGTTGTGGCGGACCTGCTCGGGGACGGTGCGCAGCAGTCTGCTATCTaGTCCAGCAGCTCCCGCCGC +
Preference number: 2 (lower is better)
Translates to: QLPGVLHAVVADLLGDGAQQSAI*SSSSRR
Trigger: GCGGCGGGAGCTGCTGGAGCAGATAGCAGACTGCTG...CGCACCGTCCCCGAGCAGGTCCGCCACAACAGCATGGAGGACGCCAGGGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR GCA 90 bp GACGGCAGGTCCTCCGACAGCATCCTGGGCACCTCGAAGCGGTGCGTGTCCGACAGCGGTGGTAGGTGCTaGGCAGGTGCACGCGATCGT +
Preference number: 2 (lower is better)
Translates to: DGRSSDSILGTSKRCVSDSGGRC*AGARDR
Trigger: ACGATCGCGTGCACCTGCGCAGCACCTACCACCGCT...GTCGGACACGCACCGCTTCGAGGTGCCCAGGATGCTGTCGGAGGACCTGCCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CCA 90 bp CAGCTTGTTGCCGGCCTGCGTGTACTTCTTGGTGGCCAGGTGGTAGCTGCCCTGGGCTGCAGTCGGCGCTaGCCTCCAGGTGCCCGGCAT +
Preference number: 2 (lower is better)
Translates to: QLVAGLRVLLGGQVVAALGCSRR*PPGARH
Trigger: ATGCCGGGCACCTGGAGGCCAGCGCCGACTGCAGCC...CAGGGCAGCTACCACCTGGCCACCAAGAAGTACACGCAGGCCGGCAACAAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR GCA 90 bp AGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTATGGGGAGGATATGATGTGGCCGGCCCGGGCCGCTaGGTTCTCGCCCAGCTCTGT +
Preference number: 2 (lower is better)
Translates to: SCCSGAVGPAGVWGGYDVAGPGR*VLAQLC
Trigger: ACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC...CACATCATATCCTCCCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR-3UTR GCA 90 bp CAGCTCCCTGGCGTCCTCCATGCTGTTGTGGCGGACCTGCTCGGGGACGGTGCGAGCTTGTTGCCGGCCTaGGTGTACTTCTTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: QLPGVLHAVVADLLGDGASLLPA*VYFLVA
Trigger: GGCCACCAAGAAGTACACGCAGGCCGGCAACAAGCT...CGCACCGTCCCCGAGCAGGTCCGCCACAACAGCATGGAGGACGCCAGGGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR GCA 90 bp CCACCTCCTCGTCCAGCTCCCTGGCGTCCTCCATGCTGTTGTGGCGGACCTGCTTCACCAGTGCCATCCTaGTCTGCAGCTGCGCCAGCC +
Preference number: 2 (lower is better)
Translates to: PPPRPAPWRPPCCCGGPASPVPS*SAAAPA
Trigger: GGCTGGCGCAGCTGCAGAGCAGGATGGCACTGGTGA...AGCAGGTCCGCCACAACAGCATGGAGGACGCCAGGGAGCTGGACGAGGAGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CCA 90 bp GCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCGTTGGGAGAATACGATaGAAGGGTGAACCCGACTCC +
Preference number: 2 (lower is better)
Translates to: AAAKARVSQLLLRSRGPCVGRIR*KGEPDS
Trigger: GGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAAC...GCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR-3UTR CCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGGGCCCTGCAGGAGTATaGGGAGGATATGATGTGTGG +
Preference number: 2 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPGPAGV*GGYDVW
Trigger: CCACACATCATATCCTCCCCATACTCCTGCAGGGCC...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR-3UTR CCA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGTTGGGAGAATACGATaGAAGGGTGAACCCGACTCC +
Preference number: 2 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQVGRIR*KGEPDS
Trigger: GGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAAC...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR-3UTR CCA 90 bp CAGCTTGTTGCCGGCCTGCGTGTACTTCTTGGTGGCCAGGTGGTAGCTGCCCTGGCCACGTCCAGCCGCTaGGTCTTCACGCACATGCGC +
Preference number: 2 (lower is better)
Translates to: QLVAGLRVLLGGQVVAALATSSR*VFTHMR
Trigger: GCGCATGTGCGTGAAGACCCAGCGGCTGGACGTGGC...CAGGGCAGCTACCACCTGGCCACCAAGAAGTACACGCAGGCCGGCAACAAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CCA 90 bp GGCGCTGGCCTCCAGGTGCCCGGCATAGCGGTGGTAGGTGCTGCGCAGGTGCACTTGTTCAGGAGGTCGTaGCGCTTGCACTTCCTGTAC +
Preference number: 2 (lower is better)
Translates to: GAGLQVPGIAVVGAAQVHLFRRS*RLHFLY
Trigger: GTACAGGAAGTGCAAGCGCCACGACCTCCTGAACAA...GTGCACCTGCGCAGCACCTACCACCGCTATGCCGGGCACCTGGAGGCCAGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CAA 90 bp TCCAGCAGCTCCCGCCGCGACTCCTCAGGCAGGTCCGAGGAGTCCTaGGCCACGGTCATCTTTTCCGCCATCTCCTCGGTGATGCTCATG +
Preference number: 2 (lower is better)
Translates to: SSSSRRDSSGRSEES*ATVIFSAISSVMLM
Trigger: CATGAGCATCACCGAGGAGATGGCGGAAAAGATGACCGTGGCCAAGGACTCCTCGGACCTGCCTGAGGAGTCGCGGCGGGAGCTGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR TCA 90 bp GGGTGGCCTTGTCGCAGTCCTCCAGCCCCACAAAGTCTCGCAGGGGTCTCCTGGAGTATGGGGAGGATATaGTGTGTGGGGAGCAGGGGG +
Preference number: 2 (lower is better)
Translates to: GWPCRSPPAPQSLAGVSWSMGRI*CVGSRG
Trigger: CCCCCTGCTCCCCACACATCATATCCTCCCCATACT...CCAGGAGACCCCTGCGAGACTTTGTGGGGCTGGAGGACTGCGACAAGGCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR GCA 90 bp GGACACCATCTGAGGGATGTGGTGGCACCCAGGCTCCACCTCGTCTTCTCTGTCGGGTGTCCCAGCTGTTaGTCAGGAGCCGTGGGCCCT +
Preference number: 2 (lower is better)
Translates to: GHHLRDVVAPRLHLVFSVGCPSC*SGAVGP
Trigger: AGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCC...GACAGAGAAGACGAGGTGGAGCCTGGGTGCCACCACATCCCTCAGATGGTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR GCA 90 bp GTAGAACTTGTTCAGGAGGTCGTGGCGCTTGCACTTCCTGTACAGCTGCTCGGCGAGCCTAGCAGGGGGTaGAGCCGCCAAGGCCCGGGT +
Preference number: 2 (lower is better)
Translates to: VELVQEVVALALPVQLLGEPSRG*SRQGPG
Trigger: ACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCTC...GCCGAGCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCCTGAACAAGTTCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR GCA 90 bp CAGGGGTCTCCTGGACACCATCTGAGGGATGTGGTGGCACCCAGGCTCCACCTCGAGCGCGGCGTCTCCTaGACGGCTTCGCATACAAAC +
Preference number: 2 (lower is better)
Translates to: QGSPGHHLRDVVAPRLHLERGVS*TASHTN
Trigger: GTTTGTATGCGAAGCCGTGCAGGAGACGCCGCGCTC...GAGGTGGAGCCTGGGTGCCACCACATCCCTCAGATGGTGTCCAGGAGACCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR GCA 90 bp GCAGCAGTCTGCTATCTGCTCCAGCAGCTCCCGCCGCGACTCCTCAGGCAGGTCGGAGGTCGTGGCGCTTaGACTTCCTGTACAGCTGCT +
Preference number: 2 (lower is better)
Translates to: AAVCYLLQQLPPRLLRQVGGRGA*TSCTAA
Trigger: AGCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCC...GACCTGCCTGAGGAGTCGCGGCGGGAGCTGCTGGAGCAGATAGCAGACTGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CCA 90 bp GTGTACGTCCTGCGGGCCTGGATGAACCTCTTCACCAGTGCCATCCTGCTCTGCCCAGCGCGCCCATCTTaGGGCTGCCCGTTTGCAGAC +
Preference number: 2 (lower is better)
Translates to: VYVLRAWMNLFTSAILLCPARPS*GCPFAD
Trigger: GTCTGCAAACGGGCAGCCCCAAGATGGGCGCGCTGG...GCAGAGCAGGATGGCACTGGTGAAGAGGTTCATCCAGGCCCGCAGGACGTACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CCA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGTGCCCGACCTCCTCCTaGCTCTCGTACTGGCGGGCG +
Preference number: 2 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKCPTSS*LSYWRA
Trigger: CGCCCGCCAGTACGAGAGCCAGGAGGAGGTCGGGCA...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CCA 90 bp CCACCTCCTCGTCCAGCTCCCTGGCGTCCTCCATGCTGTTGTGGCGGACCTGCTGCCAAGTTCATGAGCTaGTCGTCCAGGCCGTTCTCC +
Preference number: 2 (lower is better)
Translates to: PPPRPAPWRPPCCCGGPAAKFMS*SSRPFS
Trigger: GGAGAACGGCCTGGACGACCAGCTCATGAACTTGGC...AGCAGGTCCGCCACAACAGCATGGAGGACGCCAGGGAGCTGGACGAGGAGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR TCA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGCCAGCTGCAGCTTCCTaGGGTTCTAGAAGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRPAAAS*GSRSFS
Trigger: TGAGAAACTTCTAGAACCTCAGGAAGCTGCAGCTGG...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR-3UTR TCA 90 bp GAAGCAGTGGATGCGGACCAGGGAGAAGTGGTCCCGGGCCAGCTCGTAGTAGTGCTCCTGGACACCATCTaGGGGATGTGGTGGCACCCA +
Preference number: 2 (lower is better)
Translates to: EAVDADQGEVVPGQLVVVLLDTI*GMWWHP
Trigger: TGGGTGCCACCACATCCCTCAGATGGTGTCCAGGAG...CACTACTACGAGCTGGCCCGGGACCACTTCTCCCTGGTCCGCATCCACTGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR GCA 90 bp CCACCTCCTCGTCCAGCTCCCTGGCGTCCTCCATGCTGTTGTGGCGGACCTGCTCAGAAGATGCCTTTCTaGAGCAGCACGCTGGTCCTG +
Preference number: 2 (lower is better)
Translates to: PPPRPAPWRPPCCCGGPAQKMPF*SSTLVL
Trigger: CAGGACCAGCGTGCTGCTGCAGAAAGGCATCTTCTG...AGCAGGTCCGCCACAACAGCATGGAGGACGCCAGGGAGCTGGACGAGGAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR GCA 90 bp CTCCTTGCACAGGCGGATGGCATTCTTGAAGGCCTGTGCCCGGGTGTAGAAGTGACCGCAGAGAAGCGATaGCCCCCACCCCAGGGACCA +
Preference number: 2 (lower is better)
Translates to: LLAQADGILEGLCPGVEVTAEKR*PPPQGP
Trigger: TGGTCCCTGGGGTGGGGGGCATCGCTTCTCTGCGGT...CACTTCTACACCCGGGCACAGGCCTTCAAGAATGCCATCCGCCTGTGCAAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CCA 90 bp CCACCTCCTCGTCCAGCTCCCTGGCGTCCTCCATGCTGTTGTGGCGGACCTGCTTACGTCCTGCGGGCCTaGATGAACCTCTTCACCAGT +
Preference number: 2 (lower is better)
Translates to: PPPRPAPWRPPCCCGGPAYVLRA*MNLFTS
Trigger: ACTGGTGAAGAGGTTCATCCAGGCCCGCAGGACGTA...AGCAGGTCCGCCACAACAGCATGGAGGACGCCAGGGAGCTGGACGAGGAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CAA 90 bp ATGGTGACAAAGAAGCTGAAGTGGAGCATGGCGTCCCGGGTGGCCTaGTCGCAGTCCTCCAGCCCCACAAAGTCTCGCAGGGGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: MVTKKLKWSMASRVA*SQSSSPTKSRRGLL
Trigger: CAGGAGACCCCTGCGAGACTTTGTGGGGCTGGAGGACTGCGACAAGGCCACCCGGGACGCCATGCTCCACTTCAGCTTCTTTGTCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CAA 90 bp ATGGTGCTGTCCAGGTCTGGTTCCTCCAGGAGCAGCTCACACTGCTaGATGGACTCCTTGGGGTCCTCTGTGTACGTCCTGCGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: MVLSRSGSSRSSSHC*MDSLGSSVYVLRAW
Trigger: CCAGGCCCGCAGGACGTACACAGAGGACCCCAAGGAGTCCATCAAGCAGTGTGAGCTGCTCCTGGAGGAACCAGACCTGGACAGCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR GCA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTCCCTGGCGTCCTCCATaGTGTTGTGGCGGACCTGCT +
Preference number: 2 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGPWRPP*CCGGPA
Trigger: AGCAGGTCCGCCACAACAGCATGGAGGACGCCAGGG...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CCA 90 bp TCTCCTGGACACCATCTGAGGGATGTGGTGGCACCCAGGCTCCACCTCGTCTTCAGCCGGGGCTCACTCTaGTCCCAGAAGTGGTTCACG +
Preference number: 2 (lower is better)
Translates to: SPGHHLRDVVAPRLHLVFSRGSL*SQKWFT
Trigger: CGTGAACCACTTCTGGGACCAGAGTGAGCCCCGGCT...GAAGACGAGGTGGAGCCTGGGTGCCACCACATCCCTCAGATGGTGTCCAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR GCA 90 bp GGCCTTCAGCTTGTTGCCGGCCTGCGTGTACTTCTTGGTGGCCAGGTGGTAGCTGGGTCTTCACGCACATaGGCGCCATGTTCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: GLQLVAGLRVLLGGQVVAGSSRT*APCSPR
Trigger: TCTGGGAGAACATGGCGCGCATGTGCGTGAAGACCC...AGCTACCACCTGGCCACCAAGAAGTACACGCAGGCCGGCAACAAGCTGAAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR GCA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGCACTTCCTGTACAGCTaGTCGGCGTCCTCCTTGGCC +
Preference number: 2 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKHFLYS*SASSLA
Trigger: GGCCAAGGAGGACGCCGAGCAGCTGTACAGGAAGTG...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR GCA 90 bp TCTCCTGGTCCAGGGGGCTCTTGGCCTTGGCCTTGGCCAGGCACTTGTAGGCCTATTCTTGAAGGCCTGTaGCCGGGTGTAGAAGTGCAC +
Preference number: 2 (lower is better)
Translates to: SPGPGGSWPWPWPGTCRPILEGL*PGVEVH
Trigger: GTGCACTTCTACACCCGGGCACAGGCCTTCAAGAAT...AGGCCTACAAGTGCCTGGCCAAGGCCAAGGCCAAGAGCCCCCTGGACCAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CCA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGCACCCAGAGGCAGGTaGGACAGAGCAAGGTGCAGA +
Preference number: 2 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKAPRGR*DRARCR
Trigger: TCTGCACCTTGCTCTGTCCCACCTGCCTCTGGGTGC...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR-3UTR CCA 90 bp TTGCGCAGCCTTCTGGACATTGCCCTGGAAGCAGTGGATGCGGACCAGGGAGAAGCACCCAGAGGCAGGTaGGACAGAGCAAGGTGCAGA +
Preference number: 2 (lower is better)
Translates to: LRSLLDIALEAVDADQGEAPRGR*DRARCR
Trigger: TCTGCACCTTGCTCTGTCCCACCTGCCTCTGGGTGC...TTCTCCCTGGTCCGCATCCACTGCTTCCAGGGCAATGTCCAGAAGGCTGCGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CCA 90 bp CAGGGGTCTCCTGGACACCATCTGAGGGATGTGGTGGCACCCAGGCTCCACCTCGTTGGGAGAATACGATaGAAGGGTGAACCCGACTCC +
Preference number: 2 (lower is better)
Translates to: QGSPGHHLRDVVAPRLHLVGRIR*KGEPDS
Trigger: GGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAAC...GAGGTGGAGCCTGGGTGCCACCACATCCCTCAGATGGTGTCCAGGAGACCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CCA 90 bp CAGCTTGTTGCCGGCCTGCGTGTACTTCTTGGTGGCCAGGTGGTAGCTGCCCTGGGCCCTGCAGGAGTATaGGGAGGATATGATGTGTGG +
Preference number: 2 (lower is better)
Translates to: QLVAGLRVLLGGQVVAALGPAGV*GGYDVW
Trigger: CCACACATCATATCCTCCCCATACTCCTGCAGGGCC...CAGGGCAGCTACCACCTGGCCACCAAGAAGTACACGCAGGCCGGCAACAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CCA 90 bp GTAGGCCTCGGTCAGCGCCCCGTGGGCTTTGTCGTAGTTCTGGTATTCATCAATGCATGGCGTCCCGGGTaGCCTTGTCGCAGTCCTCCA +
Preference number: 2 (lower is better)
Translates to: VGLGQRPVGFVVVLVFINAWRPG*PCRSPP
Trigger: TGGAGGACTGCGACAAGGCCACCCGGGACGCCATGC...ATTGATGAATACCAGAACTACGACAAAGCCCACGGGGCGCTGACCGAGGCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR TCA 90 bp CAGGGGTCTCCTGGACACCATCTGAGGGATGTGGTGGCACCCAGGCTCCACCTCAATACGATGGAAGGGTaGACCCGACTCCCTTCAAAG +
Preference number: 2 (lower is better)
Translates to: QGSPGHHLRDVVAPRLHLNTMEG*TRLPSK
Trigger: CTTTGAAGGGAGTCGGGTTCACCCTTCCATCGTATT...GAGGTGGAGCCTGGGTGCCACCACATCCCTCAGATGGTGTCCAGGAGACCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR TCA 90 bp GTAGGCCTCGGTCAGCGCCCCGTGGGCTTTGTCGTAGTTCTGGTATTCATCAATGCAGGGCCAAGTTCATaGGCTGGTCGTCCAGGCCGT +
Preference number: 2 (lower is better)
Translates to: VGLGQRPVGFVVVLVFINAGPSS*AGRPGR
Trigger: ACGGCCTGGACGACCAGCTCATGAACTTGGCCCTGC...ATTGATGAATACCAGAACTACGACAAAGCCCACGGGGCGCTGACCGAGGCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR GCA 90 bp TCTCCTGGACACCATCTGAGGGATGTGGTGGCACCCAGGCTCCACCTCGTCTTCCCTGCAGCTACAGTGTaGTTTGGCCTCTCTTCGGGA +
Preference number: 2 (lower is better)
Translates to: SPGHHLRDVVAPRLHLVFPAATV*FGLSSG
Trigger: TCCCGAAGAGAGGCCAAAGCACACTGTAGCTGCAGG...GAAGACGAGGTGGAGCCTGGGTGCCACCACATCCCTCAGATGGTGTCCAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CCA 90 bp CTCCTTGCACAGGCGGATGGCATTCTTGAAGGCCTGTGCCCGGGTGTAGAAGTGCTCGCAGGGGTCTCCTaGACACCATCTGAGGGATGT +
Preference number: 2 (lower is better)
Translates to: LLAQADGILEGLCPGVEVLAGVS*TPSEGC
Trigger: ACATCCCTCAGATGGTGTCCAGGAGACCCCTGCGAG...CACTTCTACACCCGGGCACAGGCCTTCAAGAATGCCATCCGCCTGTGCAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CCA 90 bp CCCCGTGGGCTTTGTCGTAGTTCTGGTATTCATCAATCTCCACCTGGGCACAAGCCTCCGACAGCATCCTaGGCACCTCGAAGCGGTGCG +
Preference number: 2 (lower is better)
Translates to: PRGLCRSSGIHQSPPGHKPPTAS*APRSGA
Trigger: CGCACCGCTTCGAGGTGCCCAGGATGCTGTCGGAGG...CTTGTGCCCAGGTGGAGATTGATGAATACCAGAACTACGACAAAGCCCACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR TCA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGCTCCCTTCAAAGGAATaGATCCAAAAATCTAGTGGA +
Preference number: 2 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRLPSKE*IQKSSG
Trigger: TCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAG...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR-3UTR TCA 90 bp CCCCGTGGGCTTTGTCGTAGTTCTGGTATTCATCAATCTCCACCTGGGCACAAGCCGTGTCTCCGGATTTaGGCAGCGCCCTCATGGCCT +
Preference number: 2 (lower is better)
Translates to: PRGLCRSSGIHQSPPGHKPCLRI*AAPSWP
Trigger: AGGCCATGAGGGCGCTGCTCAAATCCGGAGACACGG...CTTGTGCCCAGGTGGAGATTGATGAATACCAGAACTACGACAAAGCCCACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR GCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGGCCGGCCCGGGCCGCTaGGTTCTCGCCCAGCTCTGT +
Preference number: 2 (lower is better)
Translates to: WKGEPDSLQRNESKNLVEAGPGR*VLAQLC
Trigger: ACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR-3UTR GCA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGTGGCCTTCAGCTTGTTaGCGGCCTGCGTGTACTTCT +
Preference number: 2 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKWPSAC*RPACTS
Trigger: AGAAGTACACGCAGGCCGGCAACAAGCTGAAGGCCA...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CCA 90 bp CCACCACCGCCACAGGGTCTTATCCTTCATTTTATTCACGTAGAGCTCCAGGGAGGAGACTGTGGGAGGTaGCAGGCCGGGGGAAGCTCT +
Preference number: 2 (lower is better)
Translates to: PPPPQGLILHFIHVELQGGDCGR*QAGGSS
Trigger: AGAGCTTCCCCCGGCCTGCCACCTCCCACAGTCTCC...TCCCTGGAGCTCTACGTGAATAAAATGAAGGATAAGACCCTGTGGCGGTGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR TCA 90 bp ACTTGTTCAGGAGGTCGTGGCGCTTGCACTTCCTGTACAGCTGCTCGGCGTCCTTGCCAGGTTCGAACTTaGACTCGGTTTGACTCCACC +
Preference number: 2 (lower is better)
Translates to: TCSGGRGACTSCTAARRPCQVRT*TRFDST
Trigger: GGTGGAGTCAAACCGAGTTCAAGTTCGAACCTGGCA...AGGACGCCGAGCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCCTGAACAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR TCA 90 bp CCCCGTGGGCTTTGTCGTAGTTCTGGTATTCATCAATCTCCACCTGGGCACAAGACTTCTCGTAGTAACTaGGGGCCCGGCTGCAGTCGG +
Preference number: 2 (lower is better)
Translates to: PRGLCRSSGIHQSPPGHKTSRSN*GPGCSR
Trigger: CCGACTGCAGCCGGGCCCTCAGTTACTACGAGAAGT...CTTGTGCCCAGGTGGAGATTGATGAATACCAGAACTACGACAAAGCCCACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR GCA 90 bp CATCTCGCCCTGGCTCTCCAGGTACTGCGCCCACCACCGCCACAGGGTCTTATCAAAAATTCCAGAAGATaGCTTTCTGCAGCAGCACGC +
Preference number: 2 (lower is better)
Translates to: HLALALQVLRPPPPQGLIKNSRR*LSAAAR
Trigger: GCGTGCTGCTGCAGAAAGGCATCTTCTGGAATTTTT...GATAAGACCCTGTGGCGGTGGTGGGCGCAGTACCTGGAGAGCCAGGGCGAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR TCA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGAATACGATGGAAGGGTaGACCCGACTCCCTTCAAAG +
Preference number: 2 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKNTMEG*TRLPSK
Trigger: CTTTGAAGGGAGTCGGGTTCACCCTTCCATCGTATT...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR-3UTR GCA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCTGGGACAGAGCAAGGTaGAGACGGGTCACACCCTCC +
Preference number: 2 (lower is better)
Translates to: EPDSLQRNESKNLVELPGWDRAR*RRVTPS
Trigger: GGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR-3UTR CCA 90 bp TCTCCACCTGGGCACAAGCGTCATAAAAGCCAGCCAGGAGGTCCAGGGCCCGCCTCATCCACAAAGAGGTaGCTCTTATTAGTCTCTTGC +
Preference number: 2 (lower is better)
Translates to: SPPGHKRHKSQPGGPGPASSTKR*LLLVSC
Trigger: GCAAGAGACTAATAAGAGCCACCTCTTTGTGGATGA...GGCGGGCCCTGGACCTCCTGGCTGGCTTTTATGACGCTTGTGCCCAGGTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR TCA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGAAAAGGAGGAGTTGTTTaGCAGTCCCCTGCCAGGTTC +
Preference number: 2 (lower is better)
Translates to: RNESKNLVELPGTQRQVGKGGVV*QSPARF
Trigger: GAACCTGGCAGGGGACTGTCAAACAACTCCTCCTTT...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CCA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTAGCTACAGTGTGCTTTaGCCTCTCTTCGGGAAAGAT +
Preference number: 2 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGSYSVL*PLFGKD
Trigger: ATCTTTCCCGAAGAGAGGCCAAAGCACACTGTAGCT...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CCA 90 bp CCCCGTGGGCTTTGTCGTAGTTCTGGTATTCATCAATCTCCACCTGGGCACAAGTTCTGGACATTGCCCTaGAAGCAGTGGATGCGGACC +
Preference number: 2 (lower is better)
Translates to: PRGLCRSSGIHQSPPGHKFWTLP*KQWMRT
Trigger: GGTCCGCATCCACTGCTTCCAGGGCAATGTCCAGAA...CTTGTGCCCAGGTGGAGATTGATGAATACCAGAACTACGACAAAGCCCACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR TCA 90 bp TCTCCTGGACACCATCTGAGGGATGTGGTGGCACCCAGGCTCCACCTCGTCTTCTCAAAGCTTTTAAAGTaGGCCAAGTCTGTCCCTACA +
Preference number: 2 (lower is better)
Translates to: SPGHHLRDVVAPRLHLVFSKLLK*AKSVPT
Trigger: TGTAGGGACAGACTTGGCTCACTTTAAAAGCTTTGA...GAAGACGAGGTGGAGCCTGGGTGCCACCACATCCCTCAGATGGTGTCCAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR GCA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCCAGAAGATGCCTTTCTaGAGCAGCACGCTGGTCCTG +
Preference number: 2 (lower is better)
Translates to: EPDSLQRNESKNLVELPGQKMPF*SSTLVL
Trigger: CAGGACCAGCGTGCTGCTGCAGAAAGGCATCTTCTG...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR-3UTR GCA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTAAAAATTCCAGAAGATaGCTTTCTGCAGCAGCACGC +
Preference number: 2 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGKNSRR*LSAAAR
Trigger: GCGTGCTGCTGCAGAAAGGCATCTTCTGGAATTTTT...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR-3UTR CCA 90 bp AGAAGTGGTTCACGGGAACATAATTTTTCAGTCCCTCATCCACAAAGAGGTGGCGTTGCTCAGGAGCCGTaGGCCCTGCAGGAGTATGGG +
Preference number: 2 (lower is better)
Translates to: RSGSREHNFSVPHPQRGGVAQEP*ALQEYG
Trigger: CCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAAC...GCCACCTCTTTGTGGATGAGGGACTGAAAAATTATGTTCCCGTGAACCACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CCA 90 bp TTGCGCAGCCTTCTGGACATTGCCCTGGAAGCAGTGGATGCGGACCAGGGAGAACGTAGAAGCAGATTTTaGAATCAGGGCTGTTGTCAG +
Preference number: 2 (lower is better)
Translates to: LRSLLDIALEAVDADQGERRSRF*NQGCCQ
Trigger: CTGACAACAGCCCTGATTCCAAAATCTGCTTCTACG...TTCTCCCTGGTCCGCATCCACTGCTTCCAGGGCAATGTCCAGAAGGCTGCGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CCA 90 bp GTAGGCCTCGGTCAGCGCCCCGTGGGCTTTGTCGTAGTTCTGGTATTCATCAATGGTTTCCTGTCTCGTTaGCTATTTGCGCAGCCTTCT +
Preference number: 2 (lower is better)
Translates to: VGLGQRPVGFVVVLVFINGFLSR*LFAQPS
Trigger: AGAAGGCTGCGCAAATAGCCAACGAGACAGGAAACC...ATTGATGAATACCAGAACTACGACAAAGCCCACGGGGCGCTGACCGAGGCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR GCA 90 bp TTACAATGTGTAGTTGGGAGAATACGATGGAAGGGTGAACCCGACTCCCTTCAATGGGACAGAGCAAGGTaGAGACGGGTCACACCCTCC +
Preference number: 2 (lower is better)
Translates to: LQCVVGRIRWKGEPDSLQWDRAR*RRVTPS
Trigger: GGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA...TTGAAGGGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAACTACACATTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR-3UTR GCA 90 bp GGTGGCAGGCCGGGGGAAGCTCTCATGAAGCAGGAAGCCGTGCTCTTCGGAAATCTCTTATTAGTCTCTTaGTCATTAAAGGACAGCGTC +
Preference number: 2 (lower is better)
Translates to: GGRPGEALMKQEAVLFGNLLLVS*SLKDSV
Trigger: GACGCTGTCCTTTAATGAGCAAGAGACTAATAAGAG...ATTTCCGAAGAGCACGGCTTCCTGCTTCATGAGAGCTTCCCCCGGCCTGCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR TCA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTCTCCCTTCAAAGGAATaGATCCAAAAATCTAGTGGA +
Preference number: 2 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGLPSKE*IQKSSG
Trigger: TCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAG...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR-3UTR GCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCAGAAGATGCCTTTCTaGAGCAGCACGCTGGTCCTG +
Preference number: 2 (lower is better)
Translates to: WKGEPDSLQRNESKNLVEQKMPF*SSTLVL
Trigger: CAGGACCAGCGTGCTGCTGCAGAAAGGCATCTTCTG...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR-3UTR TCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGAACTTGAACTCGGTTTaGCTCCACCGTGTAAACGTT +
Preference number: 2 (lower is better)
Translates to: WKGEPDSLQRNESKNLVENLNSV*LHRVNV
Trigger: AACGTTTACACGGTGGAGTCAAACCGAGTTCAAGTT...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CAA 90 bp ATTAGTCTCTTGCTCATTAAAGGACAGCGTCTCTCTCCGATCAATTaGTCCAGTCTTGAAGTCAAAGACGGTCACTGTGTCCATTTCAAC +
Preference number: 2 (lower is better)
Translates to: ISLLLIKGQRLSPIN*SSLEVKDGHCVHFN
Trigger: GTTGAAATGGACACAGTGACCGTCTTTGACTTCAAGACTGGACAAATTGATCGGAGAGAGACGCTGTCCTTTAATGAGCAAGAGACTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 72 bp GTTGTGGCGGACCTGCTCGGGGACGGTGCGTGGCAGTaGGAGACCCAGCCCCCGGTGCACGGCGTCCACGGC +
Preference number: 3 (lower is better)
Translates to: VVADLLGDGAWQ*ETQPPVHGVHG
Trigger: GCCGTGGACGCCGTGCACCGGGGGCTGGGTCTCCCACTGCCACGCACCGTCCCCGAGCAGGTCCGCCACAAC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR GCA 72 bp TGGTGCTCCCGCTGCTGCTGCACCGCAGAGAAGCGATaGCCCCCACCCCAGGGACCAGCTCCGCCAGGCTCC +
Preference number: 3 (lower is better)
Translates to: WCSRCCCTAEKR*PPPQGPAPPGS
Trigger: GGAGCCTGGCGGAGCTGGTCCCTGGGGTGGGGGGCATCGCTTCTCTGCGGTGCAGCAGCAGCGGGAGCACCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR GCA 72 bp CGCAGGGCCAGCGCGCCCATCTTGGGGCTGCCCGTTTaGAGACTGAGGCTGGGAGCGCGGCGTCTCCTGCAC +
Preference number: 3 (lower is better)
Translates to: RRASAPILGLPV*RLRLGARRLLH
Trigger: GTGCAGGAGACGCCGCGCTCCCAGCCTCAGTCTGCAAACGGGCAGCCCCAAGATGGGCGCGCTGGCCCTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR TCA 72 bp CCAGCGCGCCCATCTTGGGGCTGCCCGTTTGCAGACTaGGGCTGGGAGCGCGGCGTCTCCTGCACGGCTTCG +
Preference number: 3 (lower is better)
Translates to: PARPSWGCPFAD*GWERGVSCTAS
Trigger: CGAAGCCGTGCAGGAGACGCCGCGCTCCCAGCCTCAGTCTGCAAACGGGCAGCCCCAAGATGGGCGCGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR GCA 72 bp GGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTaGTCAGGAGCCGTGGGCCCTGCAGGAGTATGGGGA +
Preference number: 3 (lower is better)
Translates to: GVQPPRPGCPSC*SGAVGPAGVWG
Trigger: TCCCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR GCA 72 bp TGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTaGGTTCTCGCCCAGCTCTGTCGCGTATTCCAACAC +
Preference number: 3 (lower is better)
Translates to: CRRVTPSAGPGR*VLAQLCRVFQH
Trigger: GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR GCA 72 bp AGTGTTGGTGGCCGGTGGGCAGAGCCTAGCAGGGGGTaGAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCT +
Preference number: 3 (lower is better)
Translates to: SVGGRWAEPSRG*SRQGPGVPAVA
Trigger: AGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCTCTGCCCACCGGCCACCAACACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR GCA 72 bp CGCTGGCCTCCAGGTGCCCGGCATAGCGGTGGTAGGTaGTGCGCAGGTGCACGCGATCGTGGTGCTCGGCTA +
Preference number: 3 (lower is better)
Translates to: RWPPGARHSGGR*CAGARDRGARL
Trigger: TAGCCGAGCACCACGATCGCGTGCACCTGCGCAGCACCTACCACCGCTATGCCGGGCACCTGGAGGCCAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 72 bp GCTGCGCCAGCCTGGTCTCCTGGTCCAGGGGGCTCTTaGCCTTGGCCTTGGCCAGGCACTTGTAGGCCTCGG +
Preference number: 3 (lower is better)
Translates to: AAPAWSPGPGGS*PWPWPGTCRPR
Trigger: CCGAGGCCTACAAGTGCCTGGCCAAGGCCAAGGCCAAGAGCCCCCTGGACCAGGAGACCAGGCTGGCGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR GCA 72 bp TGGCCTCCAGGTGCCCGGCATAGCGGTGGTAGGTGCTaGGCAGGTGCACGCGATCGTGGTGCTCGGCTACCT +
Preference number: 3 (lower is better)
Translates to: WPPGARHSGGRC*AGARDRGARLP
Trigger: AGGTAGCCGAGCACCACGATCGCGTGCACCTGCGCAGCACCTACCACCGCTATGCCGGGCACCTGGAGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR GCA 72 bp GGCCAGGTGGTAGCTGCCCTGGCGCATGCAGCAGTCTaGTATCTGCTCCAGCAGCTCCCGCCGCGACTCCTC +
Preference number: 3 (lower is better)
Translates to: GQVVAALAHAAV*YLLQQLPPRLL
Trigger: GAGGAGTCGCGGCGGGAGCTGCTGGAGCAGATAGCAGACTGCTGCATGCGCCAGGGCAGCTACCACCTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 72 bp TGGTCTCCTGGTCCAGGGGGCTCTTGGCCTTGGCCTTaGCCAGGCACTTGTAGGCCTCGGTCAGCGCCCCGT +
Preference number: 3 (lower is better)
Translates to: WSPGPGGSWPWP*PGTCRPRSAPR
Trigger: ACGGGGCGCTGACCGAGGCCTACAAGTGCCTGGCCAAGGCCAAGGCCAAGAGCCCCCTGGACCAGGAGACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 72 bp CCAGCCTGGTCTCCTGGTCCAGGGGGCTCTTGGCCTTaGCCTTGGCCAGGCACTTGTAGGCCTCGGTCAGCG +
Preference number: 3 (lower is better)
Translates to: PAWSPGPGGSWP*PWPGTCRPRSA
Trigger: CGCTGACCGAGGCCTACAAGTGCCTGGCCAAGGCCAAGGCCAAGAGCCCCCTGGACCAGGAGACCAGGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 72 bp TCACCAGTGCCATCCTGCTCTGCAGCTGCGCCAGCCTaGTCTCCTGGTCCAGGGGGCTCTTGGCCTTGGCCT +
Preference number: 3 (lower is better)
Translates to: SPVPSCSAAAPA*SPGPGGSWPWP
Trigger: AGGCCAAGGCCAAGAGCCCCCTGGACCAGGAGACCAGGCTGGCGCAGCTGCAGAGCAGGATGGCACTGGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 72 bp CGTCCACGGCCTGCGGGCTCACGTAGTAGGACATGTTaGCCAAGGGAAGCCGCCGCCGCATCTCCTCCAGGA +
Preference number: 3 (lower is better)
Translates to: RPRPAGSRSRTC*PREAAAASPPG
Trigger: TCCTGGAGGAGATGCGGCGGCGGCTTCCCTTGGCCAACATGTCCTACTACGTGAGCCCGCAGGCCGTGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CAA 90 bp CCACCTCCTCGTCCAGCTCCCTGGCGTCCTCCATGCTGTTGTGGCGGACCTGCTAGGCGGATGGCATTCTaGAAGGCCTGTGCCCGGGTG +
Preference number: 3 (lower is better)
Translates to: PPPRPAPWRPPCCCGGPARRMAF*KACARV
Trigger: CACCCGGGCACAGGCCTTCAAGAATGCCATCCGCCT...AGCAGGTCCGCCACAACAGCATGGAGGACGCCAGGGAGCTGGACGAGGAGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR GCA 72 bp TTCAGGAGGTCGTGGCGCTTGCACTTCCTGTACAGCTaGTCGGCGTCCTCCTTGGCCACGTCCAGCCGCTGG +
Preference number: 3 (lower is better)
Translates to: FRRSWRLHFLYS*SASSLATSSRW
Trigger: CCAGCGGCTGGACGTGGCCAAGGAGGACGCCGAGCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCCTGAA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 72 bp AGAGCTCCAGGGACGGCAGGTCCTCCGACAGCATCCTaGGCACCTCGAAGCGGTGCGTGTCCGACTTCTCGT +
Preference number: 3 (lower is better)
Translates to: RAPGTAGPPTAS*APRSGACPTSR
Trigger: ACGAGAAGTCGGACACGCACCGCTTCGAGGTGCCCAGGATGCTGTCGGAGGACCTGCCGTCCCTGGAGCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CAA 90 bp CCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGACAGCTACAGTGTGCTTaGGCCTCTCTTCGGGAAAGA +
Preference number: 3 (lower is better)
Translates to: PPRPGCPSCCSGAVGPAGQLQCA*ASLRER
Trigger: TCTTTCCCGAAGAGAGGCCAAAGCACACTGTAGCTG...TCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CAA 90 bp CTCCTTGCACAGGCGGATGGCATTCTTGAAGGCCTGTGCCCGGGTGTAGAAGTGTGCTCGGCGTCCTCCTaGGCCACGTCCAGCCGCTGG +
Preference number: 3 (lower is better)
Translates to: LLAQADGILEGLCPGVEVCSASS*ATSSRW
Trigger: CCAGCGGCTGGACGTGGCCAAGGAGGACGCCGAGCA...CACTTCTACACCCGGGCACAGGCCTTCAAGAATGCCATCCGCCTGTGCAAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR TCA 72 bp GCAGCTCTACCGCCCTCTCGTACTGACTGTGCTCGATaGAGAAGTCGGAGCAGCGGGCCAGGAGCGCAGGGT +
Preference number: 3 (lower is better)
Translates to: AALPPSRTDCAR*RSRSSGPGAQG
Trigger: ACCCTGCGCTCCTGGCCCGCTGCTCCGACTTCTTCATCGAGCACAGTCAGTACGAGAGGGCGGTAGAGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR GCA 72 bp CTCCTTGCACAGGCGGATGGCATTCTTGAAGGCCTGTaGCCGGGTGTAGAAGTGCACCGCCTGCCCGACCTC +
Preference number: 3 (lower is better)
Translates to: LLAQADGILEGL*PGVEVHRLPDL
Trigger: GAGGTCGGGCAGGCGGTGCACTTCTACACCCGGGCACAGGCCTTCAAGAATGCCATCCGCCTGTGCAAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 72 bp TGGCCTTCAGCTTGTTGCCGGCCTGCGTGTACTTCTTaGTGGCCAGGTGGTAGCTGCCCTGGCGCATGCAGC +
Preference number: 3 (lower is better)
Translates to: WPSACCRPACTS*WPGGSCPGACS
Trigger: GCTGCATGCGCCAGGGCAGCTACCACCTGGCCACCAAGAAGTACACGCAGGCCGGCAACAAGCTGAAGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CAA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGCCAGCGCGCCCATCTaGGGGCTGCCCGTTTGCAGA +
Preference number: 3 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKASAPI*GLPVCR
Trigger: TCTGCAAACGGGCAGCCCCAAGATGGGCGCGCTGGC...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR TCA 72 bp CCAGGCCGTTCTCCTTGCACAGGCGGATGGCATTCTTaGAGGCCTGTGCCCGGGTGTAGAAGTGCACCGCCT +
Preference number: 3 (lower is better)
Translates to: PGRSPCTGGWHS*RPVPGCRSAPP
Trigger: AGGCGGTGCACTTCTACACCCGGGCACAGGCCTTCAAGAATGCCATCCGCCTGTGCAAGGAGAACGGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR TCA 72 bp GGGCCTTGGAGAAGTGGCCAGCCTTGTGGTACAGCATaGCCGCCCTGTCCATCTGCACGCCCTTCTCCTCGT +
Preference number: 3 (lower is better)
Translates to: GPWRSGQPCGTA*PPCPSARPSPR
Trigger: ACGAGGAGAAGGGCGTGCAGATGGACAGGGCGGTCATGCTGTACCACAAGGCTGGCCACTTCTCCAAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR GCA 72 bp CCACCAGGAAGCCATAGACGTCCCCGATGCGGATGGTaGTGTCCAGGTCTGGTTCCTCCAGGAGCAGCTCAC +
Preference number: 3 (lower is better)
Translates to: PPGSHRRPRCGW*CPGLVPPGAAH
Trigger: GTGAGCTGCTCCTGGAGGAACCAGACCTGGACAGCACCATCCGCATCGGGGACGTCTATGGCTTCCTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 72 bp CAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTaGGCCCTGCAGGAGTATGGGGAGGATATGATGTGT +
Preference number: 3 (lower is better)
Translates to: QGPGVPAVAQEP*ALQEYGEDMMC
Trigger: ACACATCATATCCTCCCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR CCA 72 bp ATTTGCGCAGCCTTCTGGACATTGCCCTGGAAGCAGTaGATGCGGACCAGGGAGAAGTGGTCCCGGGCCAGC +
Preference number: 3 (lower is better)
Translates to: ICAAFWTLPWKQ*MRTREKWSRAS
Trigger: GCTGGCCCGGGACCACTTCTCCCTGGTCCGCATCCACTGCTTCCAGGGCAATGTCCAGAAGGCTGCGCAAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 72 bp CCTTCAGCTTGTTGCCGGCCTGCGTGTACTTCTTGGTaGCCAGGTGGTAGCTGCCCTGGCGCATGCAGCAGT +
Preference number: 3 (lower is better)
Translates to: PSACCRPACTSW*PGGSCPGACSS
Trigger: ACTGCTGCATGCGCCAGGGCAGCTACCACCTGGCCACCAAGAAGTACACGCAGGCCGGCAACAAGCTGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 72 bp GCTCCACCAGGAAGCCATAGACGTCCCCGATGCGGATaGTGCTGTCCAGGTCTGGTTCCTCCAGGAGCAGCT +
Preference number: 3 (lower is better)
Translates to: APPGSHRRPRCG*CCPGLVPPGAA
Trigger: AGCTGCTCCTGGAGGAACCAGACCTGGACAGCACCATCCGCATCGGGGACGTCTATGGCTTCCTGGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CAA 90 bp CGGCGCTGGCCTCCAGGTGCCCGGCATAGCGGTGGTAGGTGCTGCGCAGGTGCAATGAGCTTGATGGATTaGAAGGCTTCGTCCATGTCT +
Preference number: 3 (lower is better)
Translates to: RRWPPGARHSGGRCCAGAMSLMD*KASSMS
Trigger: AGACATGGACGAAGCCTTCAAATCCATCAAGCTCAT...TGCACCTGCGCAGCACCTACCACCGCTATGCCGGGCACCTGGAGGCCAGCGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR TCA 72 bp AATCAGGGCTGTTGTCAGCCTTGCTGGGGAGGATGCTaGTGGTGCTCCCGCTGCTGCTGCACCGCAGAGAAG +
Preference number: 3 (lower is better)
Translates to: NQGCCQPCWGGC*WCSRCCCTAEK
Trigger: CTTCTCTGCGGTGCAGCAGCAGCGGGAGCACCATCAGCATCCTCCCCAGCAAGGCTGACAACAGCCCTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 72 bp CTGCTTTATTGGAATTACAGGAGTGTTGGTGGCCGGTaGGCAGAGCCTAGCAGGGGGTGCAGCCGCCAAGGC +
Preference number: 3 (lower is better)
Translates to: LLYWNYRSVGGR*AEPSRGCSRQG
Trigger: GCCTTGGCGGCTGCACCCCCTGCTAGGCTCTGCCCACCGGCCACCAACACTCCTGTAATTCCAATAAAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR-3UTR CAA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGGAATTACAGGAGTGTaGGTGGCCGGTGGGCAGAGC +
Preference number: 3 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKGITGV*VAGGQS
Trigger: GCTCTGCCCACCGGCCACCAACACTCCTGTAATTCC...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR-3UTR CAA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTGGAATTACAGGAGTGTaGGTGGCCGGTGGGCAGAGC +
Preference number: 3 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGGITGV*VAGGQS
Trigger: GCTCTGCCCACCGGCCACCAACACTCCTGTAATTCC...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
3UTR-3UTR CAA 90 bp TGCTCGGCGTCCTCCTTGGCCACGTCCAGCCGCTGGGTCTTCACGCACATGCGCGAACTTGAACTCGGTTaGACTCCACCGTGTAAACGT +
Preference number: 3 (lower is better)
Translates to: CSASSLATSSRWVFTHMRELELG*TPPCKR
Trigger: ACGTTTACACGGTGGAGTCAAACCGAGTTCAAGTTC...GCGCATGTGCGTGAAGACCCAGCGGCTGGACGTGGCCAAGGAGGACGCCGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CAA 90 bp GGCGCTGGCCTCCAGGTGCCCGGCATAGCGGTGGTAGGTGCTGCGCAGGTGCACCTCTCTCCGATCAATTaGTCCAGTCTTGAAGTCAAA +
Preference number: 3 (lower is better)
Translates to: GAGLQVPGIAVVGAAQVHLSPIN*SSLEVK
Trigger: TTTGACTTCAAGACTGGACAAATTGATCGGAGAGAG...GTGCACCTGCGCAGCACCTACCACCGCTATGCCGGGCACCTGGAGGCCAGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CAA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTAGGAGGTCGTGGCGCTaGCACTTCCTGTACAGCTGC +
Preference number: 3 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGRRSWR*HFLYSC
Trigger: GCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCCT...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CAA 90 bp TGGCCAAGGGAAGCCGCCGCCGCATCTCCTCCAGGAATCTGTAGGCCGTCTGGTAGGTTTCCTGTCTCGTaGGCTATTTGCGCAGCCTTC +
Preference number: 3 (lower is better)
Translates to: WPREAAAASPPGICRPSGRFPVS*AICAAF
Trigger: GAAGGCTGCGCAAATAGCCAACGAGACAGGAAACCT...ACCAGACGGCCTACAGATTCCTGGAGGAGATGCGGCGGCGGCTTCCCTTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR GCA 72 bp CAGCCTGGTAGAACTTGTTCAGGAGGTCGTGGCGCTTaGACTTCCTGTACAGCTGCTCGGCGTCCTCCTTGG +
Preference number: 3 (lower is better)
Translates to: QPGRTCSGGRGA*TSCTAARRPPW
Trigger: CCAAGGAGGACGCCGAGCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCCTGAACAAGTTCTACCAGGCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 72 bp CGAGGTGGTAGGAGGCCGCCAGGTTTCCTGTCTCGTTaGCTATTTGCGCAGCCTTCTGGACATTGCCCTGGA +
Preference number: 3 (lower is better)
Translates to: RGGRRPPGFLSR*LFAQPSGHCPG
Trigger: TCCAGGGCAATGTCCAGAAGGCTGCGCAAATAGCCAACGAGACAGGAAACCTGGCGGCCTCCTACCACCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR TCA 72 bp AGACTGTGGGAGGTGGCAGGCCGGGGGAAGCTCTCATaGAGCAGGAAGCCGTGCTCTTCGGAAATGAAGAAG +
Preference number: 3 (lower is better)
Translates to: RLWEVAGRGKLS*SRKPCSSEMKK
Trigger: CTTCTTCATTTCCGAAGAGCACGGCTTCCTGCTTCATGAGAGCTTCCCCCGGCCTGCCACCTCCCACAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 72 bp TCGTCCATGTCTCCTATGGTGACAAAGAAGCTGAAGTaGAGCATGGCGTCCCGGGTGGCCTTGTCGCAGTCC +
Preference number: 3 (lower is better)
Translates to: SSMSPMVTKKLK*SMASRVALSQS
Trigger: GGACTGCGACAAGGCCACCCGGGACGCCATGCTCCACTTCAGCTTCTTTGTCACCATAGGAGACATGGACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 72 bp ATAGACGTCCCCGATGCGGATGGTGCTGTCCAGGTCTaGTTCCTCCAGGAGCAGCTCACACTGCTTGATGGA +
Preference number: 3 (lower is better)
Translates to: IDVPDADGAVQV*FLQEQLTLLDG
Trigger: TCCATCAAGCAGTGTGAGCTGCTCCTGGAGGAACCAGACCTGGACAGCACCATCCGCATCGGGGACGTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CAA 90 bp TGGCCAAGGGAAGCCGCCGCCGCATCTCCTCCAGGAATCTGTAGGCCGTCTGGTGCTCTTATTAGTCTCTaGCTCATTAAAGGACAGCGT +
Preference number: 3 (lower is better)
Translates to: WPREAAAASPPGICRPSGALISL*LIKGQR
Trigger: ACGCTGTCCTTTAATGAGCAAGAGACTAATAAGAGC...ACCAGACGGCCTACAGATTCCTGGAGGAGATGCGGCGGCGGCTTCCCTTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CAA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGAAAAAGGAGGAGTTGTTaGACAGTCCCCTGCCAGGTT +
Preference number: 3 (lower is better)
Translates to: RNESKNLVELPGTQRQVGKRRSC*TVPCQV
Trigger: AACCTGGCAGGGGACTGTCAAACAACTCCTCCTTTT...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR TCA 72 bp AGCTCTCATGAAGCAGGAAGCCGTGCTCTTCGGAAATaGAGAAGGACAGGATCAAAACATCTGCCGCAGGGC +
Preference number: 3 (lower is better)
Translates to: SSHEAGSRALRK*RRTGSKHLPQG
Trigger: GCCCTGCGGCAGATGTTTTGATCCTGTCCTTCTTCATTTCCGAAGAGCACGGCTTCCTGCTTCATGAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR GCA 72 bp GTGGTGGCACCCAGGCTCCACCTCGTCTTCTCTGTCTaGTTCTTCGGGCTTTCTTGTGAAGTAGTAATAAGG +
Preference number: 3 (lower is better)
Translates to: VVAPRLHLVFSV*FFGLSCEVVIR
Trigger: CCTTATTACTACTTCACAAGAAAGCCCGAAGAAGCAGACAGAGAAGACGAGGTGGAGCCTGGGTGCCACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR-3UTR CAA 90 bp GTAGGCCTCGGTCAGCGCCCCGTGGGCTTTGTCGTAGTTCTGGTATTCATCAATCAGACGGCCTCACTTTaGATGAGCTTGATGGATTTG +
Preference number: 3 (lower is better)
Translates to: VGLGQRPVGFVVVLVFINQTASL*MSLMDL
Trigger: CAAATCCATCAAGCTCATCAAAAGTGAGGCCGTCTG...ATTGATGAATACCAGAACTACGACAAAGCCCACGGGGCGCTGACCGAGGCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR TCA 72 bp GACAGTCCCCTGCCAGGTTCGAACTTGAACTCGGTTTaGCTCCACCGTGTAAACGTTTTCTTCATGCATTGC +
Preference number: 3 (lower is better)
Translates to: DSPLPGSNLNSV*LHRVNVFFMHC
Trigger: GCAATGCATGAAGAAAACGTTTACACGGTGGAGTCAAACCGAGTTCAAGTTCGAACCTGGCAGGGGACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CCA 72 bp TCACTGTGTCCATTTCAACATCGTAGAAGCAGATTTTaGAATCAGGGCTGTTGTCAGCCTTGCTGGGGAGGA +
Preference number: 3 (lower is better)
Translates to: SLCPFQHRRSRF*NQGCCQPCWGG
Trigger: TCCTCCCCAGCAAGGCTGACAACAGCCCTGATTCCAAAATCTGCTTCTACGATGTTGAAATGGACACAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR TCA 72 bp TTGGCCTCTCTTCGGGAAAGATCAAAGCTTTTAAAGTaGGCCAAGTCTGTCCCTACAACCAGGAAATTCCCA +
Preference number: 3 (lower is better)
Translates to: LASLRERSKLLK*AKSVPTTRKFP
Trigger: TGGGAATTTCCTGGTTGTAGGGACAGACTTGGCTCACTTTAAAAGCTTTGATCTTTCCCGAAGAGAGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp ACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGTTCACCTGGAGGGCCTCCTaGCACCGGCCCGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TEQGADGSHPPPARAAAFTWRAS*HRPAAW
Trigger: CCAGGCTGCGGGCCGGTGGCAGGAGGCCCTCCAGGT...GAACGCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp CGGCGCTGGCCTCCAGGTGCCCGGCATAGCGGTGGTAGGTGCTGCGCAGGTGCAAGACCCAGCCCCCGGTaGACGGCGTCCACGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RRWPPGARHSGGRCCAGARPSPR*TASTAC
Trigger: GCAGGCCGTGGACGCCGTGCACCGGGGGCTGGGTCT...TGCACCTGCGCAGCACCTACCACCGCTATGCCGGGCACCTGGAGGCCAGCGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGGCCGGCCCGGGCCGCTaGGTTCTCGCCCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPAGPGR*VLAQLC
Trigger: ACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TGGGACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGAGCCTAGCAGGGGGTaGAGCCGCCAAGGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: WDRARCRRVTPSAGPGRCEPSRG*SRQGPG
Trigger: ACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCTC...GCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGCGGGCCCCGCGGGCATaGCCCATGTTCCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQRAPRA*PMFPRH
Trigger: GTGCCTGGGGAACATGGGCCATGCCCGCGGGGCCCG...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361339.9
ENST00000426508.7
CDS-3UTR CCA 90 bp ACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGTTCGCATGCCCAGCTGCGTaGCCAGCACGGCCACGCGGG +
Preference number: 4 (lower is better)
Translates to: TEQGADGSHPPPARAAAFACPAA*PARPRG
Trigger: CCCGCGTGGCCGTGCTGGCCACGCAGCTGGGCATGC...GAACGCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361339.9
ENST00000426508.7
CDS-3UTR CCA 90 bp TGGGACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGCAGCTGCGCCAGCCTaGTCTCCTGGTCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: WDRARCRRVTPSAGPGRCAAAPA*SPGPGG
Trigger: GCCCCCTGGACCAGGAGACCAGGCTGGCGCAGCTGC...GCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TGGGACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCCGGCGTCCTCCAGCATaGCCAGCTGCGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: WDRARCRRVTPSAGPGRCRRPPA*PAAWPA
Trigger: TGCTGGCCACGCAGCTGGGCATGCTGGAGGACGCCG...GCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361339.9
ENST00000426508.7
CDS-3UTR GCA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTACCTGGAGGGCCTCCTaGCACCGGCCCGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSTWRAS*HRPAAW
Trigger: CCAGGCTGCGGGCCGGTGGCAGGAGGCCCTCCAGGT...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACCCAGCCCCCGGTaGACGGCGTCCACGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHRPSPR*TASTAC
Trigger: GCAGGCCGTGGACGCCGTGCACCGGGGGCTGGGTCT...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TGGGACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCAGGGCAGCATTCCCGTaGCGGGGGCAGGCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: WDRARCRRVTPSAGPGRCRAAFP*RGQAWN
Trigger: GTTCCAGGCCTGCCCCCGCCACGGGAATGCTGCCCT...GCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361339.9
CDS-3UTR CCA 90 bp TGGGACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCTGGTGCTCGGCTACCTaGAGGGCCTCCTGCCACCGG +
Preference number: 4 (lower is better)
Translates to: WDRARCRRVTPSAGPGRCWCSAT*RASCHR
Trigger: CCGGTGGCAGGAGGCCCTCCAGGTAGCCGAGCACCA...GCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGGCTGCAGTCGGCGCTaGCCTCCAGGTGCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQGCSRR*PPGARH
Trigger: ATGCCGGGCACCTGGAGGCCAGCGCCGACTGCAGCC...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TGGGACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGGTCCAGGGGGCTCTTaGCCTTGGCCTTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: WDRARCRRVTPSAGPGRCGPGGS*PWPWPG
Trigger: GCCTGGCCAAGGCCAAGGCCAAGAGCCCCCTGGACC...GCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGCTCGGGGACGGTGCGTaGCAGTGGGAGACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQLGDGA*QWETQP
Trigger: GGGCTGGGTCTCCCACTGCCACGCACCGTCCCCGAG...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp CCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGATCCAGCATGCCCAGCTaGGTGGCCAGCACGGCCACG +
Preference number: 4 (lower is better)
Translates to: PPRPGCPSCCSGAVGPAGSSMPS*VASTAT
Trigger: CGTGGCCGTGCTGGCCACGCAGCTGGGCATGCTGGA...TCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361339.9
ENST00000426508.7
CDS-3UTR GCA 90 bp GCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCTGGCTCTCCAGGTACTaGGCCCACCACCGCCACAGG +
Preference number: 4 (lower is better)
Translates to: AAAKARVSQLLLRSRGPCWLSRY*AHHRHR
Trigger: CCTGTGGCGGTGGTGGGCGCAGTACCTGGAGAGCCA...GCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TGGGACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGGGTGTCCCAGCTGTTaGTCAGGAGCCGTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: WDRARCRRVTPSAGPGRCGCPSC*SGAVGP
Trigger: AGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCC...GCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TGGGACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGCCACGTCCAGCCGCTaGGTCTTCACGCACATGCGC +
Preference number: 4 (lower is better)
Translates to: WDRARCRRVTPSAGPGRCATSSR*VFTHMR
Trigger: GCGCATGTGCGTGAAGACCCAGCGGCTGGACGTGGC...GCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp CCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGATGGTGCTCGGCTACCTaGAGGGCCTCCTGCCACCGG +
Preference number: 4 (lower is better)
Translates to: PPRPGCPSCCSGAVGPAGWCSAT*RASCHR
Trigger: CCGGTGGCAGGAGGCCCTCCAGGTAGCCGAGCACCA...TCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGGTCCAGGGGGCTCTTaGCCTTGGCCTTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQGPGGS*PWPWPG
Trigger: GCCTGGCCAAGGCCAAGGCCAAGAGCCCCCTGGACC...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTGACGGTGCGTGGCAGTaGGAGACCCAGCCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSDGAWQ*ETQPPV
Trigger: CACCGGGGGCTGGGTCTCCCACTGCCACGCACCGTC...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACGACGGTGCGTGGCAGTaGGAGACCCAGCCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHDGAWQ*ETQPPV
Trigger: CACCGGGGGCTGGGTCTCCCACTGCCACGCACCGTC...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TGGGACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGCATGGCGTCCCGGGTaGCCTTGTCGCAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: WDRARCRRVTPSAGPGRCAWRPG*PCRSPP
Trigger: TGGAGGACTGCGACAAGGCCACCCGGGACGCCATGC...GCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp CAGCTCCCTGGCGTCCTCCATGCTGTTGTGGCGGACCTGCTCGGGGACGGTGCGGCTCGGCGTCCTCCTTaGCCACGTCCAGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: QLPGVLHAVVADLLGDGAARRPP*PRPAAG
Trigger: CCCAGCGGCTGGACGTGGCCAAGGAGGACGCCGAGC...CGCACCGTCCCCGAGCAGGTCCGCCACAACAGCATGGAGGACGCCAGGGAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp CAGCTCCCTGGCGTCCTCCATGCTGTTGTGGCGGACCTGCTCGGGGACGGTGCGTGCCCGTTTGCAGACTaGGGCTGGGAGCGCGGCGTC +
Preference number: 4 (lower is better)
Translates to: QLPGVLHAVVADLLGDGACPFAD*GWERGV
Trigger: GACGCCGCGCTCCCAGCCTCAGTCTGCAAACGGGCA...CGCACCGTCCCCGAGCAGGTCCGCCACAACAGCATGGAGGACGCCAGGGAGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGGAAATAGCCGAAGGTaGGCGAGGCGGCCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQGNSRR*ARRPRG
Trigger: TCCTCGGGGCCGCCTCGCTCACCTTCGGCTATTTCC...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR GCA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTTCCAGCATGCCCAGCTaGGTGGCCAGCACGGCCACG +
Preference number: 4 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSSSMPS*VASTAT
Trigger: CGTGGCCGTGCTGGCCACGCAGCTGGGCATGCTGGA...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361339.9
ENST00000426508.7
CDS-3UTR GCA 90 bp CCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGATGCACGCGATCGTGGTaGTCGGCTACCTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PPRPGCPSCCSGAVGPAGCTRSW*SATWRA
Trigger: GGCCCTCCAGGTAGCCGAGCACCACGATCGCGTGCA...TCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCCCCTGGCGTCCTCCATaGTGTTGTGGCGGACCTGCT +
Preference number: 4 (lower is better)
Translates to: AAAKARVSQLLLRSRGPCPWRPP*CCGGPA
Trigger: AGCAGGTCCGCCACAACAGCATGGAGGACGCCAGGG...GCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp ACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGTTCGGGTGTCCCAGCTGTTaGTCAGGAGCCGTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: TEQGADGSHPPPARAAAFGCPSC*SGAVGP
Trigger: AGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCC...GAACGCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGACCGCAGAGAAGCGATaGCCCCCACCCCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPTAEKR*PPPQGP
Trigger: TGGTCCCTGGGGTGGGGGGCATCGCTTCTCTGCGGT...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp ACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGTTCGCCACGTCCAGCCGCTaGGTCTTCACGCACATGCGC +
Preference number: 4 (lower is better)
Translates to: TEQGADGSHPPPARAAAFATSSR*VFTHMR
Trigger: GCGCATGTGCGTGAAGACCCAGCGGCTGGACGTGGC...GAACGCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp CGGCGCTGGCCTCCAGGTGCCCGGCATAGCGGTGGTAGGTGCTGCGCAGGTGCACCTCCGACAGCATCCTaGGCACCTCGAAGCGGTGCG +
Preference number: 4 (lower is better)
Translates to: RRWPPGARHSGGRCCAGAPPTAS*APRSGA
Trigger: CGCACCGCTTCGAGGTGCCCAGGATGCTGTCGGAGG...TGCACCTGCGCAGCACCTACCACCGCTATGCCGGGCACCTGGAGGCCAGCGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp GACGGCAGGTCCTCCGACAGCATCCTGGGCACCTCGAAGCGGTGCGTGTCCGACCTCGGGGACGGTGCGTaGCAGTGGGAGACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: DGRSSDSILGTSKRCVSDLGDGA*QWETQP
Trigger: GGGCTGGGTCTCCCACTGCCACGCACCGTCCCCGAG...GTCGGACACGCACCGCTTCGAGGTGCCCAGGATGCTGTCGGAGGACCTGCCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp CGGCGCTGGCCTCCAGGTGCCCGGCATAGCGGTGGTAGGTGCTGCGCAGGTGCACCAGCGCGCCCATCTTaGGGCTGCCCGTTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: RRWPPGARHSGGRCCAGAPARPS*GCPFAD
Trigger: GTCTGCAAACGGGCAGCCCCAAGATGGGCGCGCTGG...TGCACCTGCGCAGCACCTACCACCGCTATGCCGGGCACCTGGAGGCCAGCGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp GCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCTCCTGCGGGCCTGGATaGACCTCTTCACCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: AAAKARVSQLLLRSRGPCSCGPG*TSSPVP
Trigger: TGGCACTGGTGAAGAGGTTCATCCAGGCCCGCAGGA...GCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGAGCTCGGTAGGGGTCTaGAGGGCCCACCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQSSVGV*RAHLSL
Trigger: CAAGGACAGGTGGGCCCTTCAGACCCCTACCGAGCT...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR GCA 90 bp GGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATACCTGGAGGGCCTCCTaGCACCGGCCCGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GPGRCVLAQLCRVFQHRHTWRAS*HRPAAW
Trigger: CCAGGCTGCGGGCCGGTGGCAGGAGGCCCTCCAGGT...ATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACTGCACGCGATCGTGGTaGTCGGCTACCTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHCTRSW*SATWRA
Trigger: GGCCCTCCAGGTAGCCGAGCACCACGATCGCGTGCA...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACCTGCTCGGGGACGGTaGGTGGCAGTGGGAGACCCA +
Preference number: 4 (lower is better)
Translates to: AGPGRCVLAQLCRVFQHRPARGR*VAVGDP
Trigger: TGGGTCTCCCACTGCCACGCACCGTCCCCGAGCAGG...TCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGTGCACCGCCTGCCCGACCTCCTCCTGGCTCTCGTACTGGCGGGCGAGGTGGTACCAGCCGCGTCGGGTaGCAGCACAGGGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: SAPPARPPPGSRTGGRGGTSRVG*QHREAT
Trigger: GGTTGCTTCCCTGTGCTGGCACCCGACGCGGCTGGT...ACCACCTCGCCCGCCAGTACGAGAGCCAGGAGGAGGTCGGGCAGGCGGTGCACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACACCAGCCGCGTCGGGTaGCAGCACAGGGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHTSRVG*QHREAT
Trigger: GGTTGCTTCCCTGTGCTGGCACCCGACGCGGCTGGT...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGAGACTCGGGGAGACCTaGATGGCGGCCACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPRLGET*MAATCW
Trigger: CCAGCAAGTGGCCGCCATGCAGGTCTCCCCGAGTCT...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTTGGGGCTGCCCGTTTaGAGACTGAGGCTGGGAGCG +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPLGLPV*RLRLGA
Trigger: CGCTCCCAGCCTCAGTCTGCAAACGGGCAGCCCCAA...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGGCATGCCCAGCTGCGTaGCCAGCACGGCCACGCGGG +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMACPAA*PARPRG
Trigger: CCCGCGTGGCCGTGCTGGCCACGCAGCTGGGCATGC...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361339.9
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGAGGTGCACGCGATCGTaGTGCTCGGCTACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPRCTRS*CSATWR
Trigger: CCTCCAGGTAGCCGAGCACCACGATCGCGTGCACCT...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACCCTCCGACAGCATCCTaGGCACCTCGAAGCGGTGCG +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHPPTAS*APRSGA
Trigger: CGCACCGCTTCGAGGTGCCCAGGATGCTGTCGGAGG...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGGCGTCCATCTCGCCCTaGCTCTCCAGGTACTGCGCC +
Preference number: 4 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRASISP*LSRYCA
Trigger: GGCGCAGTACCTGGAGAGCCAGGGCGAGATGGACGC...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACGCGTCCATCTCGCCCTaGCTCTCCAGGTACTGCGCC +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHASISP*LSRYCA
Trigger: GGCGCAGTACCTGGAGAGCCAGGGCGAGATGGACGC...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTGCGTCCATCTCGCCCTaGCTCTCCAGGTACTGCGCC +
Preference number: 4 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSASISP*LSRYCA
Trigger: GGCGCAGTACCTGGAGAGCCAGGGCGAGATGGACGC...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGGGGGCTCTTGGCCTTaGCCTTGGCCAGGCACTTGT +
Preference number: 4 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQGGSWP*PWPGTC
Trigger: ACAAGTGCCTGGCCAAGGCCAAGGCCAAGAGCCCCC...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCCGTCCCCGATGCGGATaGTGCTGTCCAGGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: AAAKARVSQLLLRSRGPCRPRCG*CCPGLV
Trigger: AACCAGACCTGGACAGCACCATCCGCATCGGGGACG...GCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGTGTTGGTGGCCGGTaGGCAGAGCCTAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHSVGGR*AEPSRG
Trigger: CCCCCTGCTAGGCTCTGCCCACCGGCCACCAACACT...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGCCAGCGCGCCCATCTTaGGGCTGCCCGTTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRPARPS*GCPFAD
Trigger: GTCTGCAAACGGGCAGCCCCAAGATGGGCGCGCTGG...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACGGAGACTGTGGGAGGTaGCAGGCCGGGGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHGDCGR*QAGGSS
Trigger: AGAGCTTCCCCCGGCCTGCCACCTCCCACAGTCTCC...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp CCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAACTTCTCGTAGTAACTaGGGGCCCGGCTGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: PPRPGCPSCCSGAVGPAGTSRSN*GPGCSR
Trigger: CCGACTGCAGCCGGGCCCTCAGTTACTACGAGAAGT...TCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTGCAGGGCCAAGTTCATaGGCTGGTCGTCCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSAGPSS*AGRPGR
Trigger: ACGGCCTGGACGACCAGCTCATGAACTTGGCCCTGC...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp CCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAAGCTGCAGGGCTTCCTaGTACTTCCTGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PPRPGCPSCCSGAVGPAGSCRAS*YFLAAS
Trigger: GCTGGCTGCCAGGAAGTATCAGGAAGCCCTGCAGCT...TCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp ACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGTTCCCGCCATCTCCTCGGTaGTGCTCATGTTCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: TEQGADGSHPPPARAAAFPPSPR*CSCSAP
Trigger: TGGGGCAGAACATGAGCATCACCGAGGAGATGGCGG...GAACGCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCCACTTCCTGTACAGCTaGTCGGCGTCCTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: AAAKARVSQLLLRSRGPCHFLYS*SASSSM
Trigger: CATGCTGGAGGACGCCGAGCAGCTGTACAGGAAGTG...GCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361339.9
ENST00000426508.7
CDS-3UTR GCA 90 bp ACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGTTCCATAGCGGTGGTAGGTaGTGCGCAGGTGCACGCGAT +
Preference number: 4 (lower is better)
Translates to: TEQGADGSHPPPARAAAFHSGGR*CAGARD
Trigger: ATCGCGTGCACCTGCGCAGCACCTACCACCGCTATG...GAACGCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACTCACCAGTGCCATCCTaGTCTGCAGCTGCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHSPVPS*SAAAPA
Trigger: GGCTGGCGCAGCTGCAGAGCAGGATGGCACTGGTGA...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGCCCCGATGCGGATGGTaGTGTCCAGGTCTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPPRCGW*CPGLVP
Trigger: AGGAACCAGACCTGGACAGCACCATCCGCATCGGGG...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACCCCTGGCGTCCTCCATaGTGTTGTGGCGGACCTGCT +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHPWRPP*CCGGPA
Trigger: AGCAGGTCCGCCACAACAGCATGGAGGACGCCAGGG...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGGAGCCTAGCAGGGGGTaGAGCCGCCAAGGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMEPSRG*SRQGPG
Trigger: ACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCTC...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TCTCCACCTGGGCACAAGCGTCATAAAAGCCAGCCAGGAGGTCCAGGGCCCGCCGAGCCTAGCAGGGGGTaGAGCCGCCAAGGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: SPPGHKRHKSQPGGPGPAEPSRG*SRQGPG
Trigger: ACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCTC...GGCGGGCCCTGGACCTCCTGGCTGGCTTTTATGACGCTTGTGCCCAGGTGGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp ACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGTTCGCTCCGCCAGGCTCCTaGAGCTACAGTGTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: TEQGADGSHPPPARAAAFAPPGS*SYSVLW
Trigger: CCAAAGCACACTGTAGCTGCAGGAGCCTGGCGGAGC...GAACGCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGATCGGGCACGCACGTaGAGCTCCGAGGCCCGAGCG +
Preference number: 4 (lower is better)
Translates to: GPGRCVLAQLCRVFQHRHDRART*SSEARA
Trigger: CGCTCGGGCCTCGGAGCTGCACGTGCGTGCCCGATC...ATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR GCA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTCCTCTGCCCCGGGGCTaGCCAGGAAGTCTGGTACTT +
Preference number: 4 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSPLPRG*PGSLVL
Trigger: AAGTACCAGACTTCCTGGGCAGCCCCGGGGCAGAGG...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGGGGTACCTATGGTCCTaGGGGCAACTGGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPGYLWS*GQLDGW
Trigger: CCAGCCATCCAGTTGCCCCCAGGACCATAGGTACCC...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361339.9
CDS-3UTR CCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACGGGGGCTCTTGGCCTTaGCCTTGGCCAGGCACTTGT +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHGGSWP*PWPGTC
Trigger: ACAAGTGCCTGGCCAAGGCCAAGGCCAAGAGCCCCC...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp CCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGACGTCCCCGATGCGGATaGTGCTGTCCAGGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: PPRPGCPSCCSGAVGPAGRPRCG*CCPGLV
Trigger: AACCAGACCTGGACAGCACCATCCGCATCGGGGACG...TCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGCGTAGTAGGACATGTTaGCCAAGGGAAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQRSRTC*PREAAA
Trigger: GGCGGCGGCTTCCCTTGGCCAACATGTCCTACTACG...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGCGTAGTAGGACATGTTaGCCAAGGGAAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPRSRTC*PREAAA
Trigger: GGCGGCGGCTTCCCTTGGCCAACATGTCCTACTACG...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp CAGGGGTCTCCTGGACACCATCTGAGGGATGTGGTGGCACCCAGGCTCCACCTCGACGGTGCGTGGCAGTaGGAGACCCAGCCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: QGSPGHHLRDVVAPRLHLDGAWQ*ETQPPV
Trigger: CACCGGGGGCTGGGTCTCCCACTGCCACGCACCGTC...GAGGTGGAGCCTGGGTGCCACCACATCCCTCAGATGGTGTCCAGGAGACCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTTCCTCCATGCTGTTGTaGCGGACCTGCTCGGGGACG +
Preference number: 4 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSSSMLL*RTCSGT
Trigger: CGTCCCCGAGCAGGTCCGCCACAACAGCATGGAGGA...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCGAATTACAGGAGTGTTaGTGGCCGGTGGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: AAAKARVSQLLLRSRGPCELQEC*WPVGRA
Trigger: GGCTCTGCCCACCGGCCACCAACACTCCTGTAATTC...GCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TGGGACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGAATTACAGGAGTGTTaGTGGCCGGTGGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: WDRARCRRVTPSAGPGRCELQEC*WPVGRA
Trigger: GGCTCTGCCCACCGGCCACCAACACTCCTGTAATTC...GCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp CCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGCGGCCACTTGCTGGTaGAAGTGTGACGACATGGCC +
Preference number: 4 (lower is better)
Translates to: PPRPGCPSCCSGAVGPAGAATCW*KCDDMA
Trigger: GGCCATGTCGTCACACTTCCACCAGCAAGTGGCCGC...TCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp CACGTCCAGCCGCTGGGTCTTCACGCACATGCGCGCCATGTTCTCCCAGACGGCATCCCCAGGAGACTGTaGGAGGTGGCAGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: HVQPLGLHAHARHVLPDGIPRRL*EVAGRG
Trigger: CCCCCGGCCTGCCACCTCCCACAGTCTCCTGGGGAT...GCCGTCTGGGAGAACATGGCGCGCATGTGCGTGAAGACCCAGCGGCTGGACGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp TGGGACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCCTCGCAGGGGTCTCCTaGACACCATCTGAGGGATGT +
Preference number: 4 (lower is better)
Translates to: WDRARCRRVTPSAGPGRCLAGVS*TPSEGC
Trigger: ACATCCCTCAGATGGTGTCCAGGAGACCCCTGCGAG...GCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCTGCACTCGGCCCCTTTaGTCCAACCTCCACAAGAGC +
Preference number: 4 (lower is better)
Translates to: AAAKARVSQLLLRSRGPCCTRPL*SNLHKS
Trigger: GCTCTTGTGGAGGTTGGACCAAAGGGGCCGAGTGCA...GCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR TCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGACTGACTGTGCTCGATaGAGAAGTCGGAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPTDCAR*RSRSSG
Trigger: CCCGCTGCTCCGACTTCTTCATCGAGCACAGTCAGT...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp CCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGCAGCTCACACTGCTTaGTGGACTCCTTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PPRPGCPSCCSGAVGPAGAAHTA*WTPWGP
Trigger: AGGACCCCAAGGAGTCCATCAAGCAGTGTGAGCTGC...TCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGAGTATGGGGAGGATATaGTGTGTGGGGAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPSMGRI*CVGSRG
Trigger: CCCCCTGCTCCCCACACATCATATCCTCCCCATACT...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp ACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGTTCAGTATGGGGAGGATATaGTGTGTGGGGAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: TEQGADGSHPPPARAAAFSMGRI*CVGSRG
Trigger: CCCCCTGCTCCCCACACATCATATCCTCCCCATACT...GAACGCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp AGTGCACCGCCTGCCCGACCTCCTCCTGGCTCTCGTACTGGCGGGCGAGGTGGTGGATGGCCACGGAGATaGCGCTGTTCACTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SAPPARPPPGSRTGGRGGGWPRR*RCSLPA
Trigger: TGCTGGCAGTGAACAGCGTCATCTCCGTGGCCATCC...ACCACCTCGCCCGCCAGTACGAGAGCCAGGAGGAGGTCGGGCAGGCGGTGCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGTTGCTGGTGGAAGTGTaGCGACATGGCCCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRLLVEV*RHGPLA
Trigger: AGCGAGCGGGCCATGTCGTCACACTTCCACCAGCAA...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACCTCCTGGACACCATCTaGGGGATGTGGTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHLLDTI*GMWWHP
Trigger: TGGGTGCCACCACATCCCTCAGATGGTGTCCAGGAG...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGTCCAACGGAGCACGGTaGTGTCGGCTGTGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQSNGAR*CRLCVS
Trigger: TGACACACACAGCCGACATCACCGTGCTCCGTTGGA...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR TCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTCTGCGGACACCACCTaGGTGGTCTTGCCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPSADTT*VVLPFS
Trigger: TGAGAAGGGCAAGACCACTCAGGTGGTGTCCGCAGA...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGGGGTCTTCACGCACATaGGCGCCATGTTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPGSSRT*APCSPR
Trigger: TCTGGGAGAACATGGCGCGCATGTGCGTGAAGACCC...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGCGGCGTCCTCCAGCATaGCCAGCTGCGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMRRPPA*PAAWPA
Trigger: TGCTGGCCACGCAGCTGGGCATGCTGGAGGACGCCG...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361339.9
ENST00000426508.7
CDS-3UTR GCA 90 bp ACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGTTCTGTAGGGCCACAAACTaGTGGGTGGCAAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TEQGADGSHPPPARAAAFCRATN*WVAKAS
Trigger: GCTGGCCTTTGCCACCCAGCAGTTTGTGGCCCTACA...GAACGCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGTGTAGGGCCACAAACTaGTGGGTGGCAAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQCRATN*WVAKAS
Trigger: GCTGGCCTTTGCCACCCAGCAGTTTGTGGCCCTACA...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp CCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAAGCTGCCCTGGCGCATaGAGCAGTCTGCTATCTGCT +
Preference number: 4 (lower is better)
Translates to: PPRPGCPSCCSGAVGPAGSCPGA*SSLLSA
Trigger: AGCAGATAGCAGACTGCTGCATGCGCCAGGGCAGCT...TCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGAGCTGCCCTGGCGCATaGAGCAGTCTGCTATCTGCT +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPSCPGA*SSLLSA
Trigger: AGCAGATAGCAGACTGCTGCATGCGCCAGGGCAGCT...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp ACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGTTCAGCTTGTTGCCGGCCTaGGTGTACTTCTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: TEQGADGSHPPPARAAAFSLLPA*VYFLVA
Trigger: GGCCACCAAGAAGTACACGCAGGCCGGCAACAAGCT...GAACGCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCGAACCTCTTCACCAGTaGCATCCTGCTCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AAAKARVSQLLLRSRGPCEPLHQ*HPALQL
Trigger: CAGCTGCAGAGCAGGATGGCACTGGTGAAGAGGTTC...GCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGCATAGACGTCCCCGATaGGGATGGTGCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPHRRPR*GWCCPG
Trigger: ACCTGGACAGCACCATCCGCATCGGGGACGTCTATG...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGTCAGGGGTCGTCATCTaGCTCTTCCACCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQSGVVI*LFHHLL
Trigger: GAGGAGGTGGTGGAAGAGGCAGATGACGACCCCTGA...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTCAGGGGTCGTCATCTaGCTCTTCCACCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPSGVVI*LFHHLL
Trigger: GAGGAGGTGGTGGAAGAGGCAGATGACGACCCCTGA...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TGGGACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCCAGAAGATGCCTTTCTaGAGCAGCACGCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: WDRARCRRVTPSAGPGRCQKMPF*SSTLVL
Trigger: CAGGACCAGCGTGCTGCTGCAGAAAGGCATCTTCTG...GCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGTCAGGGGCATCGTGTaGTGCTCCTTGTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQVRGIV*CSLSCL
Trigger: CAAGCAGGACAAGGAGCAGCACACGATGCCCCTGAC...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp CCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGATGCATGGCGGCCACTTaGTGGTGGAAGTGTGACGAC +
Preference number: 4 (lower is better)
Translates to: PPRPGCPSCCSGAVGPAGCMAAT*WWKCDD
Trigger: GTCGTCACACTTCCACCAGCAAGTGGCCGCCATGCA...TCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GGCGCTGGCCTCCAGGTGCCCGGCATAGCGGTGGTAGGTGCTGCGCAGGTGCACTCGAAGATCGCCACCTaGCTTCCGTTCCAGACTGCG +
Preference number: 4 (lower is better)
Translates to: GAGLQVPGIAVVGAAQVHSKIAT*LPFQTA
Trigger: CGCAGTCTGGAACGGAAGGCAGGTGGCGATCTTCGA...GTGCACCTGCGCAGCACCTACCACCGCTATGCCGGGCACCTGGAGGCCAGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp TGGGACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCCCTGCAGCTACAGTGTaGTTTGGCCTCTCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: WDRARCRRVTPSAGPGRCPAATV*FGLSSG
Trigger: TCCCGAAGAGAGGCCAAAGCACACTGTAGCTGCAGG...GCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp CAGCTCCCTGGCGTCCTCCATGCTGTTGTGGCGGACCTGCTCGGGGACGGTGCGGCTCCGCCAGGCTCCTaGAGCTACAGTGTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: QLPGVLHAVVADLLGDGAAPPGS*SYSVLW
Trigger: CCAAAGCACACTGTAGCTGCAGGAGCCTGGCGGAGC...CGCACCGTCCCCGAGCAGGTCCGCCACAACAGCATGGAGGACGCCAGGGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGGAGCGCGGCGTCTCCTaGACGGCTTCGCATACAAAC +
Preference number: 4 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRERGVS*TASHTN
Trigger: GTTTGTATGCGAAGCCGTGCAGGAGACGCCGCGCTC...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGTCCCCAGGCACACCTTaGCCACGTCCAGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMSPGTP*PRPAAG
Trigger: CCCAGCGGCTGGACGTGGCCAAGGTGTGCCTGGGGA...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361339.9
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGCCAAGTTCATGAGCTaGTCGTCCAGGCCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQAKFMS*SSRPFS
Trigger: GGAGAACGGCCTGGACGACCAGCTCATGAACTTGGC...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGAGGGCCTTGGAGAAGTaGCCAGCCTTGTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQRALEK*PALWYS
Trigger: GCTGTACCACAAGGCTGGCCACTTCTCCAAGGCCCT...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGCCAGCCTGGTCTCCTaGTCCAGGGGGCTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GPGRCVLAQLCRVFQHRHASLVS*SRGLLA
Trigger: GGCCAAGAGCCCCCTGGACCAGGAGACCAGGCTGGC...ATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTCGTCCCCGATGCGGATaGTGCTGTCCAGGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSRPRCG*CCPGLV
Trigger: AACCAGACCTGGACAGCACCATCCGCATCGGGGACG...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp ACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGTTCCTCGACGTGTGTATCTaGCACGCACTCCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: TEQGADGSHPPPARAAAFLDVCI*HALPLL
Trigger: GAGCAAGGGGAGTGCGTGCCAGATACACACGTCGAG...GAACGCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACCCAGCAGGTTCTTCCTaGAACCCCAGGAGCACGGTG +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHPAGSS*NPRSTV
Trigger: CACCGTGCTCCTGGGGTTCCAGGAAGAACCTGCTGG...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp GGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATATCCCCAGGAGACTGTaGGAGGTGGCAGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: GPGRCVLAQLCRVFQHRHIPRRL*EVAGRG
Trigger: CCCCCGGCCTGCCACCTCCCACAGTCTCCTGGGGAT...ATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCACAAAGAAGCTGAAGTaGAGCATGGCGTCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: AAAKARVSQLLLRSRGPCTKKLK*SMASRV
Trigger: CACCCGGGACGCCATGCTCCACTTCAGCTTCTTTGT...GCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGAGCAGGCAGTTTCCACTaGGGCTCCAACGGAGCACGG +
Preference number: 4 (lower is better)
Translates to: AGPGRCVLAQLCRVFQHRAGSFH*GSNGAR
Trigger: CCGTGCTCCGTTGGAGCCCCAGTGGAAACTGCCTGC...TCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR TCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACCCTTGTGGTACAGCATaGCCGCCCTGTCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHPCGTA*PPCPSA
Trigger: TGCAGATGGACAGGGCGGTCATGCTGTACCACAAGG...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp AGTGCACCGCCTGCCCGACCTCCTCCTGGCTCTCGTACTGGCGGGCGAGGTGGTACTGACTGTGCTCGATaGAGAAGTCGGAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SAPPARPPPGSRTGGRGGTDCAR*RSRSSG
Trigger: CCCGCTGCTCCGACTTCTTCATCGAGCACAGTCAGT...ACCACCTCGCCCGCCAGTACGAGAGCCAGGAGGAGGTCGGGCAGGCGGTGCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACACTGACTGTGCTCGATaGAGAAGTCGGAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHTDCAR*RSRSSG
Trigger: CCCGCTGCTCCGACTTCTTCATCGAGCACAGTCAGT...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp GCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGATCCTGCGGGCCTGGATaGACCTCTTCACCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: AGPGRCVLAQLCRVFQHRSCGPG*TSSPVP
Trigger: TGGCACTGGTGAAGAGGTTCATCCAGGCCCGCAGGA...TCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGTATGGGGAGGATATaGTGTGTGGGGAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRSMGRI*CVGSRG
Trigger: CCCCCTGCTCCCCACACATCATATCCTCCCCATACT...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp GGCGCTGGCCTCCAGGTGCCCGGCATAGCGGTGGTAGGTGCTGCGCAGGTGCACCATAATAGAGGGCCATaGCGGAACTCAGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GAGLQVPGIAVVGAAQVHHNRGP*RNSGLL
Trigger: GAGGAGGCCTGAGTTCCGTCATGGCCCTCTATTATG...GTGCACCTGCGCAGCACCTACCACCGCTATGCCGGGCACCTGGAGGCCAGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp TGGGACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCATCCACGCTGCCTGTTaGGGTTGTGCTGATGTAAGC +
Preference number: 4 (lower is better)
Translates to: WDRARCRRVTPSAGPGRCIHAAC*GCADVS
Trigger: GCTTACATCAGCACAACCTCAACAGGCAGCGTGGAT...GCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp GCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGAGGATGGCCACGGAGATaGCGCTGTTCACTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: AGPGRCVLAQLCRVFQHRGWPRR*RCSLPA
Trigger: TGCTGGCAGTGAACAGCGTCATCTCCGTGGCCATCC...TCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp GCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGATTGCTGGTGGAAGTGTaGCGACATGGCCCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: AGPGRCVLAQLCRVFQHRLLVEV*RHGPLA
Trigger: AGCGAGCGGGCCATGTCGTCACACTTCCACCAGCAA...TCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp GCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAAAGGAGGAGTTGTTTaGCAGTCCCCTGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AAAKARVSQLLLRSRGPCKGGVV*QSPARF
Trigger: GAACCTGGCAGGGGACTGTCAAACAACTCCTCCTTT...GCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp TGGGACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCTCCCGTCCATCAGACTaGCAAAGAACAACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: WDRARCRRVTPSAGPGRCSRPSD*QRTTAP
Trigger: AGGGGCTGTTGTTCTTTGTCAGTCTGATGGACGGGA...GCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR TCA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGCCCACTGGATTTGCGTaGTGTTTCCTTGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQPTGFA*CFLGAR
Trigger: CCGAGCTCCAAGGAAACATCACGCAAATCCAGTGGG...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGGGAGGTCGTGGCGCTTaGACTTCCTGTACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRGGRGA*TSCTAA
Trigger: AGCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCC...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACGGAGGTCGTGGCGCTTaGACTTCCTGTACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHGGRGA*TSCTAA
Trigger: AGCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCC...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGCAGCCTTCTGGACATTaGCCTGGAAGCAGTGGATGC +
Preference number: 4 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQQPSGH*PGSSGC
Trigger: GCATCCACTGCTTCCAGGGCAATGTCCAGAAGGCTG...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TGGGACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCATTCTTGAAGGCCTGTaGCCGGGTGTAGAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: WDRARCRRVTPSAGPGRCILEGL*PGVEVH
Trigger: GTGCACTTCTACACCCGGGCACAGGCCTTCAAGAAT...GCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGCCAGGCCGTTCTCCTTaGACAGGCGGATGGCATTCT +
Preference number: 4 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRPGRSP*TGGWHS
Trigger: AGAATGCCATCCGCCTGTGCAAGGAGAACGGCCTGG...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTCCAGGCCGTTCTCCTTaGACAGGCGGATGGCATTCT +
Preference number: 4 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSPGRSP*TGGWHS
Trigger: AGAATGCCATCCGCCTGTGCAAGGAGAACGGCCTGG...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTAGCTTGTTGCCGGCCTaGGTGTACTTCTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSSLLPA*VYFLVA
Trigger: GGCCACCAAGAAGTACACGCAGGCCGGCAACAAGCT...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp CCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAAGGAGCAGCTCACACTaGTTGATGGACTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PPRPGCPSCCSGAVGPAGRSSSH*LMDSLG
Trigger: CCCCAAGGAGTCCATCAAGCAGTGTGAGCTGCTCCT...TCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGAGGAGCAGCTCACACTaGTTGATGGACTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPRSSSH*LMDSLG
Trigger: CCCCAAGGAGTCCATCAAGCAGTGTGAGCTGCTCCT...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGCAGAAGATGCCTTTCTaGAGCAGCACGCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPQKMPF*SSTLVL
Trigger: CAGGACCAGCGTGCTGCTGCAGAAAGGCATCTTCTG...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGCCGGCCCGGGCCGCTaGGTTCTCGCCCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKAGPGR*VLAQLC
Trigger: ACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGGGTGTCCCAGCTGTTaGTCAGGAGCCGTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GPGRCVLAQLCRVFQHRHGCPSC*SGAVGP
Trigger: AGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCC...ATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCGATGACGCTGTTCACTaGCAGCAGGTTCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: AAAKARVSQLLLRSRGPCDDAVH*QQVLPG
Trigger: TCCAGGAAGAACCTGCTGGCAGTGAACAGCGTCATC...GCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACTGCATGGCGGCCACTTaGTGGTGGAAGTGTGACGAC +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHCMAAT*WWKCDD
Trigger: GTCGTCACACTTCCACCAGCAAGTGGCCGCCATGCA...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACCCTTCCGTTCCAGACTaGGACAGCATCCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHPSVPD*DSILGG
Trigger: GCCACCAAGGATGCTGTCGCAGTCTGGAACGGAAGG...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACTCGAAGATCGCCACCTaGCTTCCGTTCCAGACTGCG +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHSKIAT*LPFQTA
Trigger: CGCAGTCTGGAACGGAAGGCAGGTGGCGATCTTCGA...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GACGGCAGGTCCTCCGACAGCATCCTGGGCACCTCGAAGCGGTGCGTGTCCGACCACTTCCTGTACAGCTaGTCGGCGTCCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: DGRSSDSILGTSKRCVSDHFLYS*SASSLA
Trigger: GGCCAAGGAGGACGCCGAGCAGCTGTACAGGAAGTG...GTCGGACACGCACCGCTTCGAGGTGCCCAGGATGCTGTCGGAGGACCTGCCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp ACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGTTCCTGAATCGTGCTGTCTaGGGACACCACCTGAGTGGT +
Preference number: 4 (lower is better)
Translates to: TEQGADGSHPPPARAAAFLNRAV*GHHLSG
Trigger: ACCACTCAGGTGGTGTCCGCAGACAGCACGATTCAG...GAACGCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAATCAAAGCGATGTCTaGCCGGCGGCCGGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRNQSDV*PAAGFP
Trigger: GGGAAAACCGGCCGCCGGGCAGACATCGCTTTGATT...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGTCCTGGGGGTACCTATaGTCCTGGGGGCAACTGGAT +
Preference number: 4 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRSWGYL*SWGQLD
Trigger: ATCCAGTTGCCCCCAGGACCATAGGTACCCCCAGGA...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000361339.9
CDS-3UTR CCA 90 bp CTCGCCCTGGCTCTCCAGGTACTGCGCCCACCACCGCCACAGGGTCTTATCCTTGCCACGTCCAGCCGCTaGGTCTTCACGCACATGCGC +
Preference number: 4 (lower is better)
Translates to: LALALQVLRPPPPQGLILATSSR*VFTHMR
Trigger: GCGCATGTGCGTGAAGACCCAGCGGCTGGACGTGGC...AAGGATAAGACCCTGTGGCGGTGGTGGGCGCAGTACCTGGAGAGCCAGGGCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTCGGGCCCCGCGGGCATaGCCCATGTTCCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGRAPRA*PMFPRH
Trigger: GTGCCTGGGGAACATGGGCCATGCCCGCGGGGCCCG...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361339.9
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGGCGTGTACTTCTTGGTaGCCAGGTGGTAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRACTSW*PGGSCP
Trigger: AGGGCAGCTACCACCTGGCCACCAAGAAGTACACGC...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTTCTTGGCCTTGGCCTTaGCCAGGCACTTGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSSWPWP*PGTCRP
Trigger: AGGCCTACAAGTGCCTGGCCAAGGCCAAGGCCAAGA...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GAAGCAGTGGATGCGGACCAGGGAGAAGTGGTCCCGGGCCAGCTCGTAGTAGTGGGTCCAGGGGGCTCTTaGCCTTGGCCTTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: EAVDADQGEVVPGQLVVVGPGGS*PWPWPG
Trigger: GCCTGGCCAAGGCCAAGGCCAAGAGCCCCCTGGACC...CACTACTACGAGCTGGCCCGGGACCACTTCTCCCTGGTCCGCATCCACTGCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp GCAGCAGTCTGCTATCTGCTCCAGCAGCTCCCGCCGCGACTCCTCAGGCAGGTCGTTGCTCAGGAGCCGTaGGCCCTGCAGGAGTATGGG +
Preference number: 4 (lower is better)
Translates to: AAVCYLLQQLPPRLLRQVVAQEP*ALQEYG
Trigger: CCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAAC...GACCTGCCTGAGGAGTCGCGGCGGGAGCTGCTGGAGCAGATAGCAGACTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp TGGGACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCAGCAACTGCCAAGAATaGATGGACAGGGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: WDRARCRRVTPSAGPGRCSNCQE*MDRVPA
Trigger: AGCTGGCACCCTGTCCATCCATTCTTGGCAGTTGCT...GCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GGGTGGCCTTGTCGCAGTCCTCCAGCCCCACAAAGTCTCGCAGGGGTCTCCTGGTCGGGGAGACCTGCATaGCGGCCACTTGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GWPCRSPPAPQSLAGVSWSGRPA*RPLAGG
Trigger: TCCACCAGCAAGTGGCCGCCATGCAGGTCTCCCCGA...CCAGGAGACCCCTGCGAGACTTTGTGGGGCTGGAGGACTGCGACAAGGCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGTGTGCGACCCCCGTaGACAGGAAGCACACATTCA +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPCVRPP*TGSTHS
Trigger: TGAATGTGTGCTTCCTGTCCACGGGGGTCGCACACA...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TCTCCACCTGGGCACAAGCGTCATAAAAGCCAGCCAGGAGGTCCAGGGCCCGCCGGAGACTGTGGGAGGTaGCAGGCCGGGGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SPPGHKRHKSQPGGPGPAGDCGR*QAGGSS
Trigger: AGAGCTTCCCCCGGCCTGCCACCTCCCACAGTCTCC...GGCGGGCCCTGGACCTCCTGGCTGGCTTTTATGACGCTTGTGCCCAGGTGGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp CCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGACGGACACCACCTGAGTaGTCTTGCCCTTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: PPRPGCPSCCSGAVGPAGRTPPE*SCPSHP
Trigger: TGGATGAGAAGGGCAAGACCACTCAGGTGGTGTCCG...TCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGTACTTTCCTCCACATaGCTACTCGCCCTCTGTCGG +
Preference number: 4 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQVLSST*LLALCR
Trigger: CCGACAGAGGGCGAGTAGCCATGTGGAGGAAAGTAC...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR TCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGGGCGGATGGCATTCTTaGAGGCCTGTGCCCGGGTGT +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMGGWHS*RPVPGC
Trigger: ACACCCGGGCACAGGCCTTCAAGAATGCCATCCGCC...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp CATCTCGCCCTGGCTCTCCAGGTACTGCGCCCACCACCGCCACAGGGTCTTATCGCAGGGCCAAGTTCATaGGCTGGTCGTCCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: HLALALQVLRPPPPQGLIAGPSS*AGRPGR
Trigger: ACGGCCTGGACGACCAGCTCATGAACTTGGCCCTGC...GATAAGACCCTGTGGCGGTGGTGGGCGCAGTACCTGGAGAGCCAGGGCGAGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTCCAGGTCCTCTGCTATaGGCTGTAGGGCCACAAACT +
Preference number: 4 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSPGPLL*AVGPQT
Trigger: AGTTTGTGGCCCTACAGCTCATAGCAGAGGACCTGG...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGCAGGAGCGCAGGGTCTaGCGTCTCATCCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMQERRV*RLIQVL
Trigger: GAGGACCTGGATGAGACGTCAGACCCTGCGCTCCTG...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGACCGCCCTCTCGTACTaGCTGTGCTCGATGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRTALSY*LCSMKK
Trigger: CTTCTTCATCGAGCACAGTCAGTACGAGAGGGCGGT...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp GCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACGCTCGCGAAGAACGTaGTTTTCTCCGTGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: AGPGRCVLAQLCRVFQHRRSRRT*FSPCLR
Trigger: CCGGAGACACGGAGAAAATCACGTTCTTCGCGAGCG...TCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGCAATCCTGTGATATCTaGCCCCCTTTTGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPQSCDI*PPFEGS
Trigger: GCTGCCCTCAAAAGGGGGGCAGATATCACAGGATTG...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361339.9
CDS-3UTR GCA 90 bp GCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGAGGAGGTCGTGGCGCTTaGACTTCCTGTACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AGPGRCVLAQLCRVFQHRGGRGA*TSCTAA
Trigger: AGCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCC...TCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGAGCGGTGGTAGGTGCTaGGCAGGTGCACGCGATCGT +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMSGGRC*AGARDR
Trigger: ACGATCGCGTGCACCTGCGCAGCACCTACCACCGCT...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACCAGCCTTCTGGACATTaGCCTGGAAGCAGTGGATGC +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHQPSGH*PGSSGC
Trigger: GCATCCACTGCTTCCAGGGCAATGTCCAGAAGGCTG...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCGTCTCGTTGGCTATTTaGGCAGCCTTCTGGACATTG +
Preference number: 4 (lower is better)
Translates to: AAAKARVSQLLLRSRGPCVSLAI*AAFWTL
Trigger: CAATGTCCAGAAGGCTGCGCAAATAGCCAACGAGAC...GCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp CAGGGGTCTCCTGGACACCATCTGAGGGATGTGGTGGCACCCAGGCTCCACCTCCAGCAGTCTGCTATCTaGTCCAGCAGCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: QGSPGHHLRDVVAPRLHLQQSAI*SSSSRR
Trigger: GCGGCGGGAGCTGCTGGAGCAGATAGCAGACTGCTG...GAGGTGGAGCCTGGGTGCCACCACATCCCTCAGATGGTGTCCAGGAGACCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGCAGCAGTCTGCTATCTaGTCCAGCAGCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMQQSAI*SSSSRR
Trigger: GCGGCGGGAGCTGCTGGAGCAGATAGCAGACTGCTG...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACTGGCCTTCAGCTTGTTaGCGGCCTGCGTGTACTTCT +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHWPSAC*RPACTS
Trigger: AGAAGTACACGCAGGCCGGCAACAAGCTGAAGGCCA...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GGCCTTCAGCTTGTTGCCGGCCTGCGTGTACTTCTTGGTGGCCAGGTGGTAGCTCCTGCTCGGGGACGGTaGGTGGCAGTGGGAGACCCA +
Preference number: 4 (lower is better)
Translates to: GLQLVAGLRVLLGGQVVAPARGR*VAVGDP
Trigger: TGGGTCTCCCACTGCCACGCACCGTCCCCGAGCAGG...AGCTACCACCTGGCCACCAAGAAGTACACGCAGGCCGGCAACAAGCTGAAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp GGTGGCAGGCCGGGGGAAGCTCTCATGAAGCAGGAAGCCGTGCTCTTCGGAAATCTGTTGTGGCGGACCTaGTCGGGGACGGTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: GGRPGEALMKQEAVLFGNLLWRT*SGTVRG
Trigger: GCCACGCACCGTCCCCGAGCAGGTCCGCCACAACAG...ATTTCCGAAGAGCACGGCTTCCTGCTTCATGAGAGCTTCCCCCGGCCTGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGGCTCACAGCTGCCTTTaGCAACTGAACCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRAHSCL*QLNQVL
Trigger: GAGGACCTGGTTCAGTTGGCAAAGGCAGCTGTGAGC...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGTGGTTCCTATGGTCCTaGGGGTACCTATGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRWFLWS*GYLWSW
Trigger: CCAGGACCATAGGTACCCCCAGGACCATAGGAACCA...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361339.9
CDS-3UTR CCA 90 bp CGGCGCTGGCCTCCAGGTGCCCGGCATAGCGGTGGTAGGTGCTGCGCAGGTGCATTGTTCAGGAGGTCGTaGCGCTTGCACTTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: RRWPPGARHSGGRCCAGALFRRS*RLHFLY
Trigger: GTACAGGAAGTGCAAGCGCCACGACCTCCTGAACAA...TGCACCTGCGCAGCACCTACCACCGCTATGCCGGGCACCTGGAGGCCAGCGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGAGGTGCACGCGATCGTaGTGCTCGGCTACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMRCTRS*CSATWR
Trigger: CCTCCAGGTAGCCGAGCACCACGATCGCGTGCACCT...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp CTCGCCCTGGCTCTCCAGGTACTGCGCCCACCACCGCCACAGGGTCTTATCCTTAGGTGCACGCGATCGTaGTGCTCGGCTACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LALALQVLRPPPPQGLILRCTRS*CSATWR
Trigger: CCTCCAGGTAGCCGAGCACCACGATCGCGTGCACCT...AAGGATAAGACCCTGTGGCGGTGGTGGGCGCAGTACCTGGAGAGCCAGGGCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTTTCTGGACATTGCCCTaGAAGCAGTGGATGCGGACC +
Preference number: 4 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSFWTLP*KQWMRT
Trigger: GGTCCGCATCCACTGCTTCCAGGGCAATGTCCAGAA...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCGGTTTCCTGTCTCGTTaGCTATTTGCGCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: AAAKARVSQLLLRSRGPCGFLSR*LFAQPS
Trigger: AGAAGGCTGCGCAAATAGCCAACGAGACAGGAAACC...GCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GACGGCAGGTCCTCCGACAGCATCCTGGGCACCTCGAAGCGGTGCGTGTCCGACGCCAAGTTCATGAGCTaGTCGTCCAGGCCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: DGRSSDSILGTSKRCVSDAKFMS*SSRPFS
Trigger: GGAGAACGGCCTGGACGACCAGCTCATGAACTTGGC...GTCGGACACGCACCGCTTCGAGGTGCCCAGGATGCTGTCGGAGGACCTGCCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp GACGGCAGGTCCTCCGACAGCATCCTGGGCACCTCGAAGCGGTGCGTGTCCGACGCGTGTACTTCTTGGTaGCCAGGTGGTAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: DGRSSDSILGTSKRCVSDACTSW*PGGSCP
Trigger: AGGGCAGCTACCACCTGGCCACCAAGAAGTACACGC...GTCGGACACGCACCGCTTCGAGGTGCCCAGGATGCTGTCGGAGGACCTGCCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp AGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTATGGGGAGGATATGATGTGCTCGGGGACGGTGCGTaGCAGTGGGAGACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SCCSGAVGPAGVWGGYDVLGDGA*QWETQP
Trigger: GGGCTGGGTCTCCCACTGCCACGCACCGTCCCCGAG...CACATCATATCCTCCCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGGTTGGGAGAATACGATaGAAGGGTGAACCCGACTCC +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPVGRIR*KGEPDS
Trigger: GGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAAC...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGGTTGCTCAGGAGCCGTaGGCCCTGCAGGAGTATGGG +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMVAQEP*ALQEYG
Trigger: CCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAAC...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGTTGCTCAGGAGCCGTaGGCCCTGCAGGAGTATGGG +
Preference number: 4 (lower is better)
Translates to: GPGRCVLAQLCRVFQHRHVAQEP*ALQEYG
Trigger: CCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAAC...ATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACTCGACGTGTGTATCTaGCACGCACTCCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: AGPGRCVLAQLCRVFQHRLDVCI*HALPLL
Trigger: GAGCAAGGGGAGTGCGTGCCAGATACACACGTCGAG...TCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCAGCAGTCTGCTATCTGCTCCAGCAGCTCCCGCCGCGACTCCTCAGGCAGGTCGCGGCCACTTGCTGGTaGAAGTGTGACGACATGGCC +
Preference number: 4 (lower is better)
Translates to: AAVCYLLQQLPPRLLRQVAATCW*KCDDMA
Trigger: GGCCATGTCGTCACACTTCCACCAGCAAGTGGCCGC...GACCTGCCTGAGGAGTCGCGGCGGGAGCTGCTGGAGCAGATAGCAGACTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp GGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATTCGGGGAGACCTGCATaGCGGCCACTTGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GPGRCVLAQLCRVFQHRHSGRPA*RPLAGG
Trigger: TCCACCAGCAAGTGGCCGCCATGCAGGTCTCCCCGA...ATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp GCTTGCACTTCCTGTACAGCTGCTCGGCGTCCTCCTTGGCCACGTCCAGCCGCTAGCTGCAGGGCTTCCTaGTACTTCCTGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: ACTSCTAARRPPWPRPAASCRAS*YFLAAS
Trigger: GCTGGCTGCCAGGAAGTATCAGGAAGCCCTGCAGCT...AGCGGCTGGACGTGGCCAAGGAGGACGCCGAGCAGCTGTACAGGAAGTGCAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp GGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATCCGCCATCTCCTCGGTaGTGCTCATGTTCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: GPGRCVLAQLCRVFQHRHPPSPR*CSCSAP
Trigger: TGGGGCAGAACATGAGCATCACCGAGGAGATGGCGG...ATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp CCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGACCAGCTGCAGCTTCCTaGGGTTCTAGAAGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: PPRPGCPSCCSGAVGPAGPAAAS*GSRSFS
Trigger: TGAGAAACTTCTAGAACCTCAGGAAGCTGCAGCTGG...TCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACTGCCAGGTTCGAACTTaGACTCGGTTTGACTCCACC +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHCQVRT*TRFDST
Trigger: GGTGGAGTCAAACCGAGTTCAAGTTCGAACCTGGCA...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACGGAAGATGCAGTGCGTaGGGTGTTTCCCATACTCGT +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHGRCSA*GVSHTR
Trigger: ACGAGTATGGGAAACACCTCACGCACTGCATCTTCC...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR GCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGCATAGCGGTGGTAGGTaGTGCGCAGGTGCACGCGAT +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMHSGGR*CAGARD
Trigger: ATCGCGTGCACCTGCGCAGCACCTACCACCGCTATG...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACATTCTTGAAGGCCTGTaGCCGGGTGTAGAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHILEGL*PGVEVH
Trigger: GTGCACTTCTACACCCGGGCACAGGCCTTCAAGAAT...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGAGCCGGCCCGGGCCGCTaGGTTCTCGCCCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: RNESKNLVELPGTQRQVGAGPGR*VLAQLC
Trigger: ACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCTGCTGCTCCTTGTCCTaGTTGTTAAACACCGTCACT +
Preference number: 4 (lower is better)
Translates to: AAAKARVSQLLLRSRGPCCCSLS*LLNTVT
Trigger: AGTGACGGTGTTTAACAAGCAGGACAAGGAGCAGCA...GCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGGGGCATCGTGTGCTaGTCCTTGTCCTGCTTGTTA +
Preference number: 4 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRRGIVC*SLSCLL
Trigger: TAACAAGCAGGACAAGGAGCAGCACACGATGCCCCT...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGAAACACTCCACTGATGTaGATGTCGGTGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AGPGRCVLAQLCRVFQHRNTPLM*MSVRRL
Trigger: CAGCCTGCGCACCGACATGCACATCAGTGGAGTGTT...TCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACTCACTTCTTCTGCTTTaGCCTCAGGAGGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHSLLLL*PQEAPC
Trigger: ACACGGTGCCTCCTGAGGGCAAAGCAGAAGAAGTGA...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTATGGGGAGGATATGATGTGTCCCCAGGCACACCTTaGCCACGTCCAGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: SCCSGAVGPAGVWGGYDVSPGTP*PRPAAG
Trigger: CCCAGCGGCTGGACGTGGCCAAGGTGTGCCTGGGGA...CACATCATATCCTCCCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361339.9
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGTTGTTCAGGAGGTCGTaGCGCTTGCACTTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRLFRRS*RLHFLY
Trigger: GTACAGGAAGTGCAAGCGCCACGACCTCCTGAACAA...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp ACTTGTTCAGGAGGTCGTGGCGCTTGCACTTCCTGTACAGCTGCTCGGCGTCCTTGGTGCTCGGCTACCTaGAGGGCCTCCTGCCACCGG +
Preference number: 4 (lower is better)
Translates to: TCSGGRGACTSCTAARRPWCSAT*RASCHR
Trigger: CCGGTGGCAGGAGGCCCTCCAGGTAGCCGAGCACCA...AGGACGCCGAGCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCCTGAACAAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp AGTGCACCGCCTGCCCGACCTCCTCCTGGCTCTCGTACTGGCGGGCGAGGTGGTATTTGCGCAGCCTTCTaGACATTGCCCTGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SAPPARPPPGSRTGGRGGICAAF*TLPWKQ
Trigger: CTGCTTCCAGGGCAATGTCCAGAAGGCTGCGCAAAT...ACCACCTCGCCCGCCAGTACGAGAGCCAGGAGGAGGTCGGGCAGGCGGTGCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp CGGCGCTGGCCTCCAGGTGCCCGGCATAGCGGTGGTAGGTGCTGCGCAGGTGCAGGTTTCCTGTCTCGTTaGCTATTTGCGCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RRWPPGARHSGGRCCAGAGFLSR*LFAQPS
Trigger: AGAAGGCTGCGCAAATAGCCAACGAGACAGGAAACC...TGCACCTGCGCAGCACCTACCACCGCTATGCCGGGCACCTGGAGGCCAGCGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGCCACAAACTGCTGGGTaGCAAAGGCCAGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMPQTAG*QRPAPG
Trigger: CCCTGGAGCTGGCCTTTGCCACCCAGCAGTTTGTGG...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGATTTCCTTCTGCCTaGACACGCTCGCGAAGAACG +
Preference number: 4 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRRFPSA*TRSRRT
Trigger: CGTTCTTCGCGAGCGTGTCCAGGCAGAAGGAAATCT...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGCACCCAGAGGCAGGTaGGACAGAGCAAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: GPGRCVLAQLCRVFQHRHAPRGR*DRARCR
Trigger: TCTGCACCTTGCTCTGTCCCACCTGCCTCTGGGTGC...ATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGGCACCCAGAGGCAGGTaGGACAGAGCAAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMAPRGR*DRARCR
Trigger: TCTGCACCTTGCTCTGTCCCACCTGCCTCTGGGTGC...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTAGCAACTGCCAAGAATaGATGGACAGGGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSSNCQE*MDRVPA
Trigger: AGCTGGCACCCTGTCCATCCATTCTTGGCAGTTGCT...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp GGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGCAGCTCACACTGCTTaGTGGACTCCTTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GPGRCVLAQLCRVFQHRHAAHTA*WTPWGP
Trigger: AGGACCCCAAGGAGTCCATCAAGCAGTGTGAGCTGC...ATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGCGGCCAGAAGACCTTTaGCTTTACAGTAACACACAC +
Preference number: 4 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPRPEDL*LYSNTH
Trigger: GTGTGTGTTACTGTAAAGTCAAAGGTCTTCTGGCCG...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTATGGGGAGGATATGATGTGTGCACGCGATCGTGGTaGTCGGCTACCTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SCCSGAVGPAGVWGGYDVCTRSW*SATWRA
Trigger: GGCCCTCCAGGTAGCCGAGCACCACGATCGCGTGCA...CACATCATATCCTCCCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTATGGGGAGGATATGATGTGTGGCTCTCCAGGTACTaGGCCCACCACCGCCACAGG +
Preference number: 4 (lower is better)
Translates to: SCCSGAVGPAGVWGGYDVWLSRY*AHHRHR
Trigger: CCTGTGGCGGTGGTGGGCGCAGTACCTGGAGAGCCA...CACATCATATCCTCCCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGGTCTCGTTGGCTATTTaGGCAGCCTTCTGGACATTG +
Preference number: 4 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRVSLAI*AAFWTL
Trigger: CAATGTCCAGAAGGCTGCGCAAATAGCCAACGAGAC...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GCTTGCACTTCCTGTACAGCTGCTCGGCGTCCTCCTTGGCCACGTCCAGCCGCTGTGATGCTCATGTTCTaGCCCAGGCACAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ACTSCTAARRPPWPRPAAVMLMF*PRHSCR
Trigger: CCTGCAGCTGTGCCTGGGGCAGAACATGAGCATCAC...AGCGGCTGGACGTGGCCAAGGAGGACGCCGAGCAGCTGTACAGGAAGTGCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGGCGCATGCAGCAGTCTaGTATCTGCTCCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMAHAAV*YLLQQL
Trigger: GAGCTGCTGGAGCAGATAGCAGACTGCTGCATGCGC...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGAAGCCGGAAGATGCAGTaGGTGAGGTGTTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: AGPGRCVLAQLCRVFQHRSRKMQ*VRCFPY
Trigger: GTATGGGAAACACCTCACGCACTGCATCTTCCGGCT...TCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR GCA 90 bp GCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGAATCACCGCTCACAGCTaGCTTTGCCAACTGAACCAG +
Preference number: 4 (lower is better)
Translates to: AGPGRCVLAQLCRVFQHRITAHS*LCQLNQ
Trigger: CTGGTTCAGTTGGCAAAGGCAGCTGTGAGCGGTGAT...TCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR CCA 90 bp CCACCTCCTCGTCCAGCTCCCTGGCGTCCTCCATGCTGTTGTGGCGGACCTGCTTTCTGGACATTGCCCTaGAAGCAGTGGATGCGGACC +
Preference number: 4 (lower is better)
Translates to: PPPRPAPWRPPCCCGGPAFWTLP*KQWMRT
Trigger: GGTCCGCATCCACTGCTTCCAGGGCAATGTCCAGAA...AGCAGGTCCGCCACAACAGCATGGAGGACGCCAGGGAGCTGGACGAGGAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp TTTTATTCACGTAGAGCTCCAGGGACGGCAGGTCCTCCGACAGCATCCTGGGCATGCCCGACCTCCTCCTaGCTCTCGTACTGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: FYSRRAPGTAGPPTASWACPTSS*LSYWRA
Trigger: CGCCCGCCAGTACGAGAGCCAGGAGGAGGTCGGGCA...TGCCCAGGATGCTGTCGGAGGACCTGCCGTCCCTGGAGCTCTACGTGAATAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGGCCAAGTTCATGAGCTaGTCGTCCAGGCCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMAKFMS*SSRPFS
Trigger: GGAGAACGGCCTGGACGACCAGCTCATGAACTTGGC...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCTTGCACTTCCTGTACAGCTGCTCGGCGTCCTCCTTGGCCACGTCCAGCCGCTAAGTGGCCAGCCTTGTaGTACAGCATGACCGCCCTG +
Preference number: 4 (lower is better)
Translates to: ACTSCTAARRPPWPRPAAKWPAL*YSMTAL
Trigger: CAGGGCGGTCATGCTGTACCACAAGGCTGGCCACTT...AGCGGCTGGACGTGGCCAAGGAGGACGCCGAGCAGCTGTACAGGAAGTGCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGGGTCCGAGGAGTCCTTaGCCACGGTCATCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMGPRSP*PRSSFP
Trigger: CGGAAAAGATGACCGTGGCCAAGGACTCCTCGGACC...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp CTCGCCCTGGCTCTCCAGGTACTGCGCCCACCACCGCCACAGGGTCTTATCCTTCCTGCGTGTACTTCTTaGTGGCCAGGTGGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: LALALQVLRPPPPQGLILPACTS*WPGGSC
Trigger: GCAGCTACCACCTGGCCACCAAGAAGTACACGCAGG...AAGGATAAGACCCTGTGGCGGTGGTGGGCGCAGTACCTGGAGAGCCAGGGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGAGCAGCTGCGCCAGCCTaGTCTCCTGGTCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: RNESKNLVELPGTQRQVGAAAPA*SPGPGG
Trigger: GCCCCCTGGACCAGGAGACCAGGCTGGCGCAGCTGC...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACACTGCCAAGAATGGATaGACAGGGTGCCAGCTGATA +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHTAKNG*TGCQLI
Trigger: TATCAGCTGGCACCCTGTCCATCCATTCTTGGCAGT...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GGGTGGCCTTGTCGCAGTCCTCCAGCCCCACAAAGTCTCGCAGGGGTCTCCTGGACAAAGAAGCTGAAGTaGAGCATGGCGTCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: GWPCRSPPAPQSLAGVSWTKKLK*SMASRV
Trigger: CACCCGGGACGCCATGCTCCACTTCAGCTTCTTTGT...CCAGGAGACCCCTGCGAGACTTTGTGGGGCTGGAGGACTGCGACAAGGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CAA 72 bp AAGAAGCTGAAGTGGAGCATGGCGTCCCGGGTGGCCTaGTCGCAGTCCTCCAGCCCCACAAAGTCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: KKLKWSMASRVA*SQSSSPTKSRR
Trigger: CCTGCGAGACTTTGTGGGGCTGGAGGACTGCGACAAGGCCACCCGGGACGCCATGCTCCACTTCAGCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGCCGTGTCTCCGGATTTaGGCAGCGCCCTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKPCLRI*AAPSWP
Trigger: AGGCCATGAGGGCGCTGCTCAAATCCGGAGACACGG...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp AGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTATGGGGAGGATATGATGTGCCGTGTCTCCGGATTTaGGCAGCGCCCTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: SCCSGAVGPAGVWGGYDVPCLRI*AAPSWP
Trigger: AGGCCATGAGGGCGCTGCTCAAATCCGGAGACACGG...CACATCATATCCTCCCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp GGACACCATCTGAGGGATGTGGTGGCACCCAGGCTCCACCTCGTCTTCTCTGTCTCCTGCGGGCCTGGATaGACCTCTTCACCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GHHLRDVVAPRLHLVFSVSCGPG*TSSPVP
Trigger: TGGCACTGGTGAAGAGGTTCATCCAGGCCCGCAGGA...GACAGAGAAGACGAGGTGGAGCCTGGGTGCCACCACATCCCTCAGATGGTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp GACGGCAGGTCCTCCGACAGCATCCTGGGCACCTCGAAGCGGTGCGTGTCCGACCCAGCTGCAGCTTCCTaGGGTTCTAGAAGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: DGRSSDSILGTSKRCVSDPAAAS*GSRSFS
Trigger: TGAGAAACTTCTAGAACCTCAGGAAGCTGCAGCTGG...GTCGGACACGCACCGCTTCGAGGTGCCCAGGATGCTGTCGGAGGACCTGCCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTCTGTTGAGGTTGTGCTaGTGTAAGCAACTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSLLRLC*CKQLPR
Trigger: TCTTGGCAGTTGCTTACATCAGCACAACCTCAACAG...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp TCTCCTGGACACCATCTGAGGGATGTGGTGGCACCCAGGCTCCACCTCGTCTTCACCCCAGGAGCACGGTaGTGTCGGCTGTGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: SPGHHLRDVVAPRLHLVFTPGAR*CRLCVS
Trigger: TGACACACACAGCCGACATCACCGTGCTCCTGGGGT...GAAGACGAGGTGGAGCCTGGGTGCCACCACATCCCTCAGATGGTGTCCAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp CATCTCGCCCTGGCTCTCCAGGTACTGCGCCCACCACCGCCACAGGGTCTTATCTGGCAAACACTCCACTaGTGTGCATGTCGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: HLALALQVLRPPPPQGLIWQTLH*CACRCA
Trigger: TGCGCACCGACATGCACATCAGTGGAGTGTTTGCCA...GATAAGACCCTGTGGCGGTGGTGGGCGCAGTACCTGGAGAGCCAGGGCGAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp CCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAAACTTGAACTCGGTTTaGCTCCACCGTGTAAACGTT +
Preference number: 4 (lower is better)
Translates to: PPRPGCPSCCSGAVGPAGNLNSV*LHRVNV
Trigger: AACGTTTACACGGTGGAGTCAAACCGAGTTCAAGTT...TCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp TGGGACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCTCAAAGCTTTTAAAGTaGGCCAAGTCTGTCCCTACA +
Preference number: 4 (lower is better)
Translates to: WDRARCRRVTPSAGPGRCSKLLK*AKSVPT
Trigger: TGTAGGGACAGACTTGGCTCACTTTAAAAGCTTTGA...GCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp GTAGAACTTGTTCAGGAGGTCGTGGCGCTTGCACTTCCTGTACAGCTGCTCGGCTGCTGGGGAGGATGCTaGTGGTGCTCCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VELVQEVVALALPVQLLGCWGGC*WCSRCC
Trigger: GCAGCAGCGGGAGCACCATCAGCATCCTCCCCAGCA...GCCGAGCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCCTGAACAAGTTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp GAAGCAGTGGATGCGGACCAGGGAGAAGTGGTCCCGGGCCAGCTCGTAGTAGTGGGGTCTTCACGCACATaGGCGCCATGTTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: EAVDADQGEVVPGQLVVVGSSRT*APCSPR
Trigger: TCTGGGAGAACATGGCGCGCATGTGCGTGAAGACCC...CACTACTACGAGCTGGCCCGGGACCACTTCTCCCTGGTCCGCATCCACTGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp AGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTATGGGGAGGATATGATGTGAGCGGTGGTAGGTGCTaGGCAGGTGCACGCGATCGT +
Preference number: 4 (lower is better)
Translates to: SCCSGAVGPAGVWGGYDVSGGRC*AGARDR
Trigger: ACGATCGCGTGCACCTGCGCAGCACCTACCACCGCT...CACATCATATCCTCCCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TCTCCTGGACACCATCTGAGGGATGTGGTGGCACCCAGGCTCCACCTCGTCTTCCATAGCGGTGGTAGGTaGTGCGCAGGTGCACGCGAT +
Preference number: 4 (lower is better)
Translates to: SPGHHLRDVVAPRLHLVFHSGGR*CAGARD
Trigger: ATCGCGTGCACCTGCGCAGCACCTACCACCGCTATG...GAAGACGAGGTGGAGCCTGGGTGCCACCACATCCCTCAGATGGTGTCCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp TTTTATTCACGTAGAGCTCCAGGGACGGCAGGTCCTCCGACAGCATCCTGGGCATGGCTCTCCAGGTACTaGGCCCACCACCGCCACAGG +
Preference number: 4 (lower is better)
Translates to: FYSRRAPGTAGPPTASWAWLSRY*AHHRHR
Trigger: CCTGTGGCGGTGGTGGGCGCAGTACCTGGAGAGCCA...TGCCCAGGATGCTGTCGGAGGACCTGCCGTCCCTGGAGCTCTACGTGAATAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp GGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATTGGCCTTCAGCTTGTTaGCGGCCTGCGTGTACTTCT +
Preference number: 4 (lower is better)
Translates to: GPGRCVLAQLCRVFQHRHWPSAC*RPACTS
Trigger: AGAAGTACACGCAGGCCGGCAACAAGCTGAAGGCCA...ATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGTCACCAGTGCCATCCTaGTCTGCAGCTGCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKSPVPS*SAAAPA
Trigger: GGCTGGCGCAGCTGCAGAGCAGGATGGCACTGGTGA...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp CAGGGGTCTCCTGGACACCATCTGAGGGATGTGGTGGCACCCAGGCTCCACCTCAGGAGCAGCTCACACTaGTTGATGGACTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QGSPGHHLRDVVAPRLHLRSSSH*LMDSLG
Trigger: CCCCAAGGAGTCCATCAAGCAGTGTGAGCTGCTCCT...GAGGTGGAGCCTGGGTGCCACCACATCCCTCAGATGGTGTCCAGGAGACCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACTGTTGTGGCGGACCTaGTCGGGGACGGTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: RNESKNLVELPGTQRQVGLLWRT*SGTVRG
Trigger: GCCACGCACCGTCCCCGAGCAGGTCCGCCACAACAG...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGAAAAATTCCAGAAGATaGCTTTCTGCAGCAGCACGC +
Preference number: 4 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQKNSRR*LSAAAR
Trigger: GCGTGCTGCTGCAGAAAGGCATCTTCTGGAATTTTT...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GGCCTTCAGCTTGTTGCCGGCCTGCGTGTACTTCTTGGTGGCCAGGTGGTAGCTTGGGACAGAGCAAGGTaGAGACGGGTCACACCCTCC +
Preference number: 4 (lower is better)
Translates to: GLQLVAGLRVLLGGQVVAWDRAR*RRVTPS
Trigger: GGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA...AGCTACCACCTGGCCACCAAGAAGTACACGCAGGCCGGCAACAAGCTGAAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp AGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTATGGGGAGGATATGATGTGAGACTCGGGGAGACCTaGATGGCGGCCACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SCCSGAVGPAGVWGGYDVRLGET*MAATCW
Trigger: CCAGCAAGTGGCCGCCATGCAGGTCTCCCCGAGTCT...CACATCATATCCTCCCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp CATCTCGCCCTGGCTCTCCAGGTACTGCGCCCACCACCGCCACAGGGTCTTATCCCTGCAGCTACAGTGTaGTTTGGCCTCTCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: HLALALQVLRPPPPQGLIPAATV*FGLSSG
Trigger: TCCCGAAGAGAGGCCAAAGCACACTGTAGCTGCAGG...GATAAGACCCTGTGGCGGTGGTGGGCGCAGTACCTGGAGAGCCAGGGCGAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTAGCAGAGGCGTCCCTTaGACTCGGCCCCTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGSRGVP*TRPLWS
Trigger: GGACCAAAGGGGCCGAGTGCAAGGGACGCCTCTGCT...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR GCA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTCCATCACGAGAAGGCTaGCTTCAATCAAAGCGATGT +
Preference number: 4 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSPSREG*LQSKRC
Trigger: ACATCGCTTTGATTGAAGGCAGCCTTCTCGTGATGG...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR CCA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGATGCCCGACCTCCTCCTaGCTCTCGTACTGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: RNESKNLVELPGTQRQVGCPTSS*LSYWRA
Trigger: CGCCCGCCAGTACGAGAGCCAGGAGGAGGTCGGGCA...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATTACGTCCTGCGGGCCTaGATGAACCTCTTCACCAGT +
Preference number: 4 (lower is better)
Translates to: GPGRCVLAQLCRVFQHRHYVLRA*MNLFTS
Trigger: ACTGGTGAAGAGGTTCATCCAGGCCCGCAGGACGTA...ATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGTACGTCCTGCGGGCCTaGATGAACCTCTTCACCAGT +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMYVLRA*MNLFTS
Trigger: ACTGGTGAAGAGGTTCATCCAGGCCCGCAGGACGTA...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATTGTGTGCGACCCCCGTaGACAGGAAGCACACATTCA +
Preference number: 4 (lower is better)
Translates to: GPGRCVLAQLCRVFQHRHCVRPP*TGSTHS
Trigger: TGAATGTGTGCTTCCTGTCCACGGGGGTCGCACACA...ATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCTACAGTGTGCTTTaGCCTCTCTTCGGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRSYSVL*PLFGKD
Trigger: ATCTTTCCCGAAGAGAGGCCAAAGCACACTGTAGCT...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGCCAGCAGGTTCTTCCTaGAACCCCACTGGATTTGCG +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMPAGSS*NPTGFA
Trigger: CGCAAATCCAGTGGGGTTCCAGGAAGAACCTGCTGG...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR TCA 90 bp CAGCTTGTTGCCGGCCTGCGTGTACTTCTTGGTGGCCAGGTGGTAGCTGCCCTGACCGCCCTCTCGTACTaGCTGTGCTCGATGAAGAAG +
Preference number: 4 (lower is better)
Translates to: QLVAGLRVLLGGQVVAALTALSY*LCSMKK
Trigger: CTTCTTCATCGAGCACAGTCAGTACGAGAGGGCGGT...CAGGGCAGCTACCACCTGGCCACCAAGAAGTACACGCAGGCCGGCAACAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTAGCTGCAGGGCTTCCTaGTACTTCCTGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGSCRAS*YFLAAS
Trigger: GCTGGCTGCCAGGAAGTATCAGGAAGCCCTGCAGCT...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTCCGCCATCTCCTCGGTaGTGCTCATGTTCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGPPSPR*CSCSAP
Trigger: TGGGGCAGAACATGAGCATCACCGAGGAGATGGCGG...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp TCTCCACCTGGGCACAAGCGTCATAAAAGCCAGCCAGGAGGTCCAGGGCCCGCCAAAGGAGGAGTTGTTTaGCAGTCCCCTGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SPPGHKRHKSQPGGPGPAKGGVV*QSPARF
Trigger: GAACCTGGCAGGGGACTGTCAAACAACTCCTCCTTT...GGCGGGCCCTGGACCTCCTGGCTGGCTTTTATGACGCTTGTGCCCAGGTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGATGCTGGGGAGGATGCTaGTGGTGCTCCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RNESKNLVELPGTQRQVGCWGGC*WCSRCC
Trigger: GCAGCAGCGGGAGCACCATCAGCATCCTCCCCAGCA...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGAACAACAGCCCCTCGTaGGACCCCATCTTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMNNSPS*DPIFSK
Trigger: TTTGCTGAAGATGGGGTCTCACGAGGGGCTGTTGTT...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR GCA 90 bp GGCCTTCAGCTTGTTGCCGGCCTGCGTGTACTTCTTGGTGGCCAGGTGGTAGCTAGCTGCCCTGGCGCATaGAGCAGTCTGCTATCTGCT +
Preference number: 4 (lower is better)
Translates to: GLQLVAGLRVLLGGQVVASCPGA*SSLLSA
Trigger: AGCAGATAGCAGACTGCTGCATGCGCCAGGGCAGCT...AGCTACCACCTGGCCACCAAGAAGTACACGCAGGCCGGCAACAAGCTGAAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTCCCCGATGCGGATGGTaGTGTCCAGGTCTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGPRCGW*CPGLVP
Trigger: AGGAACCAGACCTGGACAGCACCATCCGCATCGGGG...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGCCCCGATGCGGATGGTaGTGTCCAGGTCTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKPRCGW*CPGLVP
Trigger: AGGAACCAGACCTGGACAGCACCATCCGCATCGGGG...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGTGGGACAGAGCAAGGTaGAGACGGGTCACACCCTCC +
Preference number: 4 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKWDRAR*RRVTPS
Trigger: GGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GGTGGCAGGCCGGGGGAAGCTCTCATGAAGCAGGAAGCCGTGCTCTTCGGAAATGTCAGGGGCATCGTGTaGTGCTCCTTGTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: GGRPGEALMKQEAVLFGNVRGIV*CSLSCL
Trigger: CAAGCAGGACAAGGAGCAGCACACGATGCCCCTGAC...ATTTCCGAAGAGCACGGCTTCCTGCTTCATGAGAGCTTCCCCCGGCCTGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp TGGCCAAGGGAAGCCGCCGCCGCATCTCCTCCAGGAATCTGTAGGCCGTCTGGTGATGACGCTGTTCACTaGCAGCAGGTTCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: WPREAAAASPPGICRPSGDDAVH*QQVLPG
Trigger: TCCAGGAAGAACCTGCTGGCAGTGAACAGCGTCATC...ACCAGACGGCCTACAGATTCCTGGAGGAGATGCGGCGGCGGCTTCCCTTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp GGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATCACCTAAGAATGACCTaGCCTCGAGGTCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: GPGRCVLAQLCRVFQHRHHLRMT*PRGPPS
Trigger: ACTTGGAGGACCTCGAGGCCAGGTCATTCTTAGGTG...ATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361339.9
CDS-3UTR CCA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCGGCTGCAGTCGGCGCTaGCCTCCAGGTGCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: EPDSLQRNESKNLVELPGGCSRR*PPGARH
Trigger: ATGCCGGGCACCTGGAGGCCAGCGCCGACTGCAGCC...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACCTCCGACAGCATCCTaGGCACCTCGAAGCGGTGCG +
Preference number: 4 (lower is better)
Translates to: RNESKNLVELPGTQRQVGPPTAS*APRSGA
Trigger: CGCACCGCTTCGAGGTGCCCAGGATGCTGTCGGAGG...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCTTGCACTTCCTGTACAGCTGCTCGGCGTCCTCCTTGGCCACGTCCAGCCGCTAGATTTCCTTCTGCCTaGACACGCTCGCGAAGAACG +
Preference number: 4 (lower is better)
Translates to: ACTSCTAARRPPWPRPAARFPSA*TRSRRT
Trigger: CGTTCTTCGCGAGCGTGTCCAGGCAGAAGGAAATCT...AGCGGCTGGACGTGGCCAAGGAGGACGCCGAGCAGCTGTACAGGAAGTGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp GCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCTTTACAATGTGTAGTTaGGAGAATACGATGGAAGGG +
Preference number: 4 (lower is better)
Translates to: AAAKARVSQLLLRSRGPCFTMCS*ENTMEG
Trigger: CCCTTCCATCGTATTCTCCCAACTACACATTGTAAA...GCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GTGTACGTCCTGCGGGCCTGGATGAACCTCTTCACCAGTGCCATCCTGCTCTGCGAATTACAGGAGTGTTaGTGGCCGGTGGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VYVLRAWMNLFTSAILLCELQEC*WPVGRA
Trigger: GGCTCTGCCCACCGGCCACCAACACTCCTGTAATTC...GCAGAGCAGGATGGCACTGGTGAAGAGGTTCATCCAGGCCCGCAGGACGTACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp CCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGATCATCCACAAAGAGGTaGCTCTTATTAGTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PPRPGCPSCCSGAVGPAGSSTKR*LLLVSC
Trigger: GCAAGAGACTAATAAGAGCCACCTCTTTGTGGATGA...TCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TTGCGCAGCCTTCTGGACATTGCCCTGGAAGCAGTGGATGCGGACCAGGGAGAAAGCCGGGGCTCACTCTaGTCCCAGAAGTGGTTCACG +
Preference number: 4 (lower is better)
Translates to: LRSLLDIALEAVDADQGESRGSL*SQKWFT
Trigger: CGTGAACCACTTCTGGGACCAGAGTGAGCCCCGGCT...TTCTCCCTGGTCCGCATCCACTGCTTCCAGGGCAATGTCCAGAAGGCTGCGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp GGACACCATCTGAGGGATGTGGTGGCACCCAGGCTCCACCTCGTCTTCTCTGTCCTCGCAGGGGTCTCCTaGACACCATCTGAGGGATGT +
Preference number: 4 (lower is better)
Translates to: GHHLRDVVAPRLHLVFSVLAGVS*TPSEGC
Trigger: ACATCCCTCAGATGGTGTCCAGGAGACCCCTGCGAG...GACAGAGAAGACGAGGTGGAGCCTGGGTGCCACCACATCCCTCAGATGGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTCCTTGTGGTACAGCATaGCCGCCCTGTCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGPCGTA*PPCPSA
Trigger: TGCAGATGGACAGGGCGGTCATGCTGTACCACAAGG...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGCGCTCGCGAAGAACGTaGTTTTCTCCGTGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKRSRRT*FSPCLR
Trigger: CCGGAGACACGGAGAAAATCACGTTCTTCGCGAGCG...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp ACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGTTCCTCCCTTCAAAGGAATaGATCCAAAAATCTAGTGGA +
Preference number: 4 (lower is better)
Translates to: TEQGADGSHPPPARAAAFLPSKE*IQKSSG
Trigger: TCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAG...GAACGCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp GCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGAAACTTGAACTCGGTTTaGCTCCACCGTGTAAACGTT +
Preference number: 4 (lower is better)
Translates to: AGPGRCVLAQLCRVFQHRNLNSV*LHRVNV
Trigger: AACGTTTACACGGTGGAGTCAAACCGAGTTCAAGTT...TCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACTCAAAGCTTTTAAAGTaGGCCAAGTCTGTCCCTACA +
Preference number: 4 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHSKLLK*AKSVPT
Trigger: TGTAGGGACAGACTTGGCTCACTTTAAAAGCTTTGA...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCTGCCCGTTTGCAGACTaGGGCTGGGAGCGCGGCGTC +
Preference number: 4 (lower is better)
Translates to: EPDSLQRNESKNLVELPGCPFAD*GWERGV
Trigger: GACGCCGCGCTCCCAGCCTCAGTCTGCAAACGGGCA...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTGTGATGCTCATGTTCTaGCCCAGGCACAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGVMLMF*PRHSCR
Trigger: CCTGCAGCTGTGCCTGGGGCAGAACATGAGCATCAC...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGCAGTCTGCTATCTaGTCCAGCAGCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: RNESKNLVELPGTQRQVGQQSAI*SSSSRR
Trigger: GCGGCGGGAGCTGCTGGAGCAGATAGCAGACTGCTG...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTATGGGGAGGATATGATGTGTCAGGGGTCGTCATCTaGCTCTTCCACCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: SCCSGAVGPAGVWGGYDVSGVVI*LFHHLL
Trigger: GAGGAGGTGGTGGAAGAGGCAGATGACGACCCCTGA...CACATCATATCCTCCCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTCCTTCCGTTCCAGACTaGGACAGCATCCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGPSVPD*DSILGG
Trigger: GCCACCAAGGATGCTGTCGCAGTCTGGAACGGAAGG...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGCTTCATCACTTCTTCTaGTTTGCCCTCAGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMLHHFF*FALRRH
Trigger: GTGCCTCCTGAGGGCAAAGCAGAAGAAGTGATGAAG...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR CCA 90 bp AGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTATGGGGAGGATATGATGTGAAGTGGCCAGCCTTGTaGTACAGCATGACCGCCCTG +
Preference number: 4 (lower is better)
Translates to: SCCSGAVGPAGVWGGYDVKWPAL*YSMTAL
Trigger: CAGGGCGGTCATGCTGTACCACAAGGCTGGCCACTT...CACATCATATCCTCCCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTGGTCCGAGGAGTCCTTaGCCACGGTCATCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGGPRSP*PRSSFP
Trigger: CGGAAAAGATGACCGTGGCCAAGGACTCCTCGGACC...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGCCTGCGTGTACTTCTTaGTGGCCAGGTGGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKPACTS*WPGGSC
Trigger: GCAGCTACCACCTGGCCACCAAGAAGTACACGCAGG...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGAACTTCTCGTAGTAACTaGGGGCCCGGCTGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: RNESKNLVELPGTQRQVGTSRSN*GPGCSR
Trigger: CCGACTGCAGCCGGGCCCTCAGTTACTACGAGAAGT...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTACCGCCCTCTCGTACTaGCTGTGCTCGATGAAGAAG +
Preference number: 4 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGTALSY*LCSMKK
Trigger: CTTCTTCATCGAGCACAGTCAGTACGAGAGGGCGGT...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGCTGTTGAGGTTGTGCTaGTGTAAGCAACTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMLLRLC*CKQLPR
Trigger: TCTTGGCAGTTGCTTACATCAGCACAACCTCAACAG...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp GCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACTTCGGGCTTTCTTGTaGAGTAGTAATAAGGCACTT +
Preference number: 4 (lower is better)
Translates to: AGPGRCVLAQLCRVFQHRLRAFL*SSNKAL
Trigger: AAGTGCCTTATTACTACTTCACAAGAAAGCCCGAAG...TCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp GTAGGCCTCGGTCAGCGCCCCGTGGGCTTTGTCGTAGTTCTGGTATTCATCAATCTCCTGGACACCATCTaGGGGATGTGGTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: VGLGQRPVGFVVVLVFINLLDTI*GMWWHP
Trigger: TGGGTGCCACCACATCCCTCAGATGGTGTCCAGGAG...ATTGATGAATACCAGAACTACGACAAAGCCCACGGGGCGCTGACCGAGGCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCGCCGGAGGTTCTCTGTaGCCACCACCAGTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: EPDSLQRNESKNLVELPGAGGSL*PPPVPP
Trigger: GGGAGGCACTGGTGGTGGTCACAGAGAACCTCCGGC...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR GCA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCTCTAGCTCCGGCTCCTaGTCCGCCTCACGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: EPDSLQRNESKNLVELPGSSSGS*SASRSA
Trigger: AGCGCTGCGTGAGGCGGAGCAGGAGCCGGAGCTAGA...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361339.9
ENST00000426508.7
CDS-3UTR GCA 90 bp GGTGGCAGGCCGGGGGAAGCTCTCATGAAGCAGGAAGCCGTGCTCTTCGGAAATATTCTTGAAGGCCTGTaGCCGGGTGTAGAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: GGRPGEALMKQEAVLFGNILEGL*PGVEVH
Trigger: GTGCACTTCTACACCCGGGCACAGGCCTTCAAGAAT...ATTTCCGAAGAGCACGGCTTCCTGCTTCATGAGAGCTTCCCCCGGCCTGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp CCCCGTGGGCTTTGTCGTAGTTCTGGTATTCATCAATCTCCACCTGGGCACAAGTCACCAGTGCCATCCTaGTCTGCAGCTGCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PRGLCRSSGIHQSPPGHKSPVPS*SAAAPA
Trigger: GGCTGGCGCAGCTGCAGAGCAGGATGGCACTGGTGA...CTTGTGCCCAGGTGGAGATTGATGAATACCAGAACTACGACAAAGCCCACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp TTTTATTCACGTAGAGCTCCAGGGACGGCAGGTCCTCCGACAGCATCCTGGGCACATAGACGTCCCCGATaGGGATGGTGCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: FYSRRAPGTAGPPTASWAHRRPR*GWCCPG
Trigger: ACCTGGACAGCACCATCCGCATCGGGGACGTCTATG...TGCCCAGGATGCTGTCGGAGGACCTGCCGTCCCTGGAGCTCTACGTGAATAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGGCTGATGTAAGCAACTaGCAAGAATGGATGGACAGG +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMADVSN*QEWMDR
Trigger: CCTGTCCATCCATTCTTGGCAGTTGCTTACATCAGC...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCGCAGAGAAGCGATaGCCCCCACCCCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: EPDSLQRNESKNLVELPGTAEKR*PPPQGP
Trigger: TGGTCCCTGGGGTGGGGGGCATCGCTTCTCTGCGGT...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGGCTTGTGGTTCCTATaGTCCTGGGGGTACCTATGG +
Preference number: 4 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKGLWFL*SWGYLW
Trigger: CCATAGGTACCCCCAGGACCATAGGAACCACAAGCC...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361339.9
CDS-3UTR CCA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACCACAAACTGCTGGGTaGCAAAGGCCAGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RNESKNLVELPGTQRQVGPQTAG*QRPAPG
Trigger: CCCTGGAGCTGGCCTTTGCCACCCAGCAGTTTGTGG...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp CCCCGTGGGCTTTGTCGTAGTTCTGGTATTCATCAATCTCCACCTGGGCACAAGGGGGGCTCTTGGCCTTaGCCTTGGCCAGGCACTTGT +
Preference number: 4 (lower is better)
Translates to: PRGLCRSSGIHQSPPGHKGGSWP*PWPGTC
Trigger: ACAAGTGCCTGGCCAAGGCCAAGGCCAAGAGCCCCC...CTTGTGCCCAGGTGGAGATTGATGAATACCAGAACTACGACAAAGCCCACGGGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGGCCCTGCAGGAGTATaGGGAGGATATGATGTGTGG +
Preference number: 4 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKGPAGV*GGYDVW
Trigger: CCACACATCATATCCTCCCCATACTCCTGCAGGGCC...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCAGTGTTGGTGGCCGGTaGGCAGAGCCTAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: EPDSLQRNESKNLVELPGSVGGR*AEPSRG
Trigger: CCCCCTGCTAGGCTCTGCCCACCGGCCACCAACACT...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGATGGCGGCCACTTGCTaGTGGAAGTGTGACGACATG +
Preference number: 4 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKMAATC*WKCDDM
Trigger: CATGTCGTCACACTTCCACCAGCAAGTGGCCGCCAT...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCGCATGGCGTCCCGGGTaGCCTTGTCGCAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EPDSLQRNESKNLVELPGAWRPG*PCRSPP
Trigger: TGGAGGACTGCGACAAGGCCACCCGGGACGCCATGC...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
3UTR CAA 72 bp TCCAGGTCTGGTTCCTCCAGGAGCAGCTCACACTGCTaGATGGACTCCTTGGGGTCCTCTGTGTACGTCCTG +
Preference number: 4 (lower is better)
Translates to: SRSGSSRSSSHC*MDSLGSSVYVL
Trigger: CAGGACGTACACAGAGGACCCCAAGGAGTCCATCAAGCAGTGTGAGCTGCTCCTGGAGGAACCAGACCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp GTGTACGTCCTGCGGGCCTGGATGAACCTCTTCACCAGTGCCATCCTGCTCTGCAATACGATGGAAGGGTaGACCCGACTCCCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: VYVLRAWMNLFTSAILLCNTMEG*TRLPSK
Trigger: CTTTGAAGGGAGTCGGGTTCACCCTTCCATCGTATT...GCAGAGCAGGATGGCACTGGTGAAGAGGTTCATCCAGGCCCGCAGGACGTACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGAGTGATGCTCATGTTCTaGCCCAGGCACAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RNESKNLVELPGTQRQVGVMLMF*PRHSCR
Trigger: CCTGCAGCTGTGCCTGGGGCAGAACATGAGCATCAC...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGAGCGCATGCAGCAGTCTaGTATCTGCTCCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RNESKNLVELPGTQRQVGAHAAV*YLLQQL
Trigger: GAGCTGCTGGAGCAGATAGCAGACTGCTGCATGCGC...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCTGGCCAGGTGGTAGCTaGCCTGGCGCATGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: EPDSLQRNESKNLVELPGWPGGS*PGACSS
Trigger: ACTGCTGCATGCGCCAGGGCAGCTACCACCTGGCCA...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TGGCCAAGGGAAGCCGCCGCCGCATCTCCTCCAGGAATCTGTAGGCCGTCTGGTAAAAATTCCAGAAGATaGCTTTCTGCAGCAGCACGC +
Preference number: 4 (lower is better)
Translates to: WPREAAAASPPGICRPSGKNSRR*LSAAAR
Trigger: GCGTGCTGCTGCAGAAAGGCATCTTCTGGAATTTTT...ACCAGACGGCCTACAGATTCCTGGAGGAGATGCGGCGGCGGCTTCCCTTGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp GCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACTCTTATTAGTCTCTTaGTCATTAAAGGACAGCGTC +
Preference number: 4 (lower is better)
Translates to: AGPGRCVLAQLCRVFQHRLLLVS*SLKDSV
Trigger: GACGCTGTCCTTTAATGAGCAAGAGACTAATAAGAG...TCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp CCCCGTGGGCTTTGTCGTAGTTCTGGTATTCATCAATCTCCACCTGGGCACAAGGAGCGCGGCGTCTCCTaGACGGCTTCGCATACAAAC +
Preference number: 4 (lower is better)
Translates to: PRGLCRSSGIHQSPPGHKERGVS*TASHTN
Trigger: GTTTGTATGCGAAGCCGTGCAGGAGACGCCGCGCTC...CTTGTGCCCAGGTGGAGATTGATGAATACCAGAACTACGACAAAGCCCACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp AGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTATGGGGAGGATATGATGTGACAGCATCTGAATCGTaGTGTCTGCGGACACCACCT +
Preference number: 4 (lower is better)
Translates to: SCCSGAVGPAGVWGGYDVTASES*CLRTPP
Trigger: AGGTGGTGTCCGCAGACAGCACGATTCAGATGCTGT...CACATCATATCCTCCCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR GCA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTTGTGACCACCACCAGTaGCTCCCTCTTCTCCATGTA +
Preference number: 4 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGCDHHQ*LPLLHV
Trigger: TACATGGAGAAGAGGGAGGCACTGGTGGTGGTCACA...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR CCA 90 bp TTACAATGTGTAGTTGGGAGAATACGATGGAAGGGTGAACCCGACTCCCTTCAAGGCTGCAGTCGGCGCTaGCCTCCAGGTGCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: LQCVVGRIRWKGEPDSLQGCSRR*PPGARH
Trigger: ATGCCGGGCACCTGGAGGCCAGCGCCGACTGCAGCC...TTGAAGGGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAACTACACATTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGATTTGCGCAGCCTTCTaGACATTGCCCTGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKICAAF*TLPWKQ
Trigger: CTGCTTCCAGGGCAATGTCCAGAAGGCTGCGCAAAT...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GTAGGCCTCGGTCAGCGCCCCGTGGGCTTTGTCGTAGTTCTGGTATTCATCAATTCTTGGCCTTGGCCTTaGCCAGGCACTTGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: VGLGQRPVGFVVVLVFINSWPWP*PGTCRP
Trigger: AGGCCTACAAGTGCCTGGCCAAGGCCAAGGCCAAGA...ATTGATGAATACCAGAACTACGACAAAGCCCACGGGGCGCTGACCGAGGCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTAATACGATGGAAGGGTaGACCCGACTCCCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGNTMEG*TRLPSK
Trigger: CTTTGAAGGGAGTCGGGTTCACCCTTCCATCGTATT...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp AGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTATGGGGAGGATATGATGTGCCAGCTGCAGCTTCCTaGGGTTCTAGAAGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: SCCSGAVGPAGVWGGYDVPAAAS*GSRSFS
Trigger: TGAGAAACTTCTAGAACCTCAGGAAGCTGCAGCTGG...CACATCATATCCTCCCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGATGGCAAACACTCCACTaGTGTGCATGTCGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: RNESKNLVELPGTQRQVGWQTLH*CACRCA
Trigger: TGCGCACCGACATGCACATCAGTGGAGTGTTTGCCA...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp TCTCCTGGTCCAGGGGGCTCTTGGCCTTGGCCTTGGCCAGGCACTTGTAGGCCTCTTCGGGCTTTCTTGTaGAGTAGTAATAAGGCACTT +
Preference number: 4 (lower is better)
Translates to: SPGPGGSWPWPWPGTCRPLRAFL*SSNKAL
Trigger: AAGTGCCTTATTACTACTTCACAAGAAAGCCCGAAG...AGGCCTACAAGTGCCTGGCCAAGGCCAAGGCCAAGAGCCCCCTGGACCAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGATGGCCTTCAGCTTGTTaGCGGCCTGCGTGTACTTCT +
Preference number: 4 (lower is better)
Translates to: RNESKNLVELPGTQRQVGWPSAC*RPACTS
Trigger: AGAAGTACACGCAGGCCGGCAACAAGCTGAAGGCCA...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TTACAATGTGTAGTTGGGAGAATACGATGGAAGGGTGAACCCGACTCCCTTCAACCTGCTCGGGGACGGTaGGTGGCAGTGGGAGACCCA +
Preference number: 4 (lower is better)
Translates to: LQCVVGRIRWKGEPDSLQPARGR*VAVGDP
Trigger: TGGGTCTCCCACTGCCACGCACCGTCCCCGAGCAGG...TTGAAGGGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAACTACACATTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGTTGTGGCGGACCTaGTCGGGGACGGTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: WKGEPDSLQRNESKNLVELLWRT*SGTVRG
Trigger: GCCACGCACCGTCCCCGAGCAGGTCCGCCACAACAG...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GGTGGCAGGCCGGGGGAAGCTCTCATGAAGCAGGAAGCCGTGCTCTTCGGAAATGCTGATGTAAGCAACTaGCAAGAATGGATGGACAGG +
Preference number: 4 (lower is better)
Translates to: GGRPGEALMKQEAVLFGNADVSN*QEWMDR
Trigger: CCTGTCCATCCATTCTTGGCAGTTGCTTACATCAGC...ATTTCCGAAGAGCACGGCTTCCTGCTTCATGAGAGCTTCCCCCGGCCTGCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGATTCTGGACATTGCCCTaGAAGCAGTGGATGCGGACC +
Preference number: 4 (lower is better)
Translates to: RNESKNLVELPGTQRQVGFWTLP*KQWMRT
Trigger: GGTCCGCATCCACTGCTTCCAGGGCAATGTCCAGAA...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGGTTTCCTGTCTCGTTaGCTATTTGCGCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKGFLSR*LFAQPS
Trigger: AGAAGGCTGCGCAAATAGCCAACGAGACAGGAAACC...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp CCACCACCGCCACAGGGTCTTATCCTTCATTTTATTCACGTAGAGCTCCAGGGACCACAAACTGCTGGGTaGCAAAGGCCAGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PPPPQGLILHFIHVELQGPQTAG*QRPAPG
Trigger: CCCTGGAGCTGGCCTTTGCCACCCAGCAGTTTGTGG...TCCCTGGAGCTCTACGTGAATAAAATGAAGGATAAGACCCTGTGGCGGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGGCCAGCCTGGTCTCCTaGTCCAGGGGGCTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: WKGEPDSLQRNESKNLVEASLVS*SRGLLA
Trigger: GGCCAAGAGCCCCCTGGACCAGGAGACCAGGCTGGC...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGATACGTCCTGCGGGCCTaGATGAACCTCTTCACCAGT +
Preference number: 4 (lower is better)
Translates to: RNESKNLVELPGTQRQVGYVLRA*MNLFTS
Trigger: ACTGGTGAAGAGGTTCATCCAGGCCCGCAGGACGTA...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GGGTGGCCTTGTCGCAGTCCTCCAGCCCCACAAAGTCTCGCAGGGGTCTCCTGGTTTACAATGTGTAGTTaGGAGAATACGATGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GWPCRSPPAPQSLAGVSWFTMCS*ENTMEG
Trigger: CCCTTCCATCGTATTCTCCCAACTACACATTGTAAA...CCAGGAGACCCCTGCGAGACTTTGTGGGGCTGGAGGACTGCGACAAGGCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCAGCCGGGGCTCACTCTaGTCCCAGAAGTGGTTCACG +
Preference number: 4 (lower is better)
Translates to: EPDSLQRNESKNLVELPGSRGSL*SQKWFT
Trigger: CGTGAACCACTTCTGGGACCAGAGTGAGCCCCGGCT...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGAGCTGCCCAGGAAGTCTaGTACTTTCCTCCACATGGC +
Preference number: 4 (lower is better)
Translates to: RNESKNLVELPGTQRQVGAAQEV*YFPPHG
Trigger: GCCATGTGGAGGAAAGTACCAGACTTCCTGGGCAGC...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR TCA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCCGCTCGCGAAGAACGTaGTTTTCTCCGTGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: EPDSLQRNESKNLVELPGRSRRT*FSPCLR
Trigger: CCGGAGACACGGAGAAAATCACGTTCTTCGCGAGCG...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp CATCTCGCCCTGGCTCTCCAGGTACTGCGCCCACCACCGCCACAGGGTCTTATCCTCCCTTCAAAGGAATaGATCCAAAAATCTAGTGGA +
Preference number: 4 (lower is better)
Translates to: HLALALQVLRPPPPQGLILPSKE*IQKSSG
Trigger: TCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAG...GATAAGACCCTGTGGCGGTGGTGGGCGCAGTACCTGGAGAGCCAGGGCGAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp GTAGGCCTCGGTCAGCGCCCCGTGGGCTTTGTCGTAGTTCTGGTATTCATCAATATCCACGCTGCCTGTTaGGGTTGTGCTGATGTAAGC +
Preference number: 4 (lower is better)
Translates to: VGLGQRPVGFVVVLVFINIHAAC*GCADVS
Trigger: GCTTACATCAGCACAACCTCAACAGGCAGCGTGGAT...ATTGATGAATACCAGAACTACGACAAAGCCCACGGGGCGCTGACCGAGGCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCGCGCATGCAGCAGTCTaGTATCTGCTCCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: EPDSLQRNESKNLVELPGAHAAV*YLLQQL
Trigger: GAGCTGCTGGAGCAGATAGCAGACTGCTGCATGCGC...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCGCGTGTACTTCTTGGTaGCCAGGTGGTAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: EPDSLQRNESKNLVELPGACTSW*PGGSCP
Trigger: AGGGCAGCTACCACCTGGCCACCAAGAAGTACACGC...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TTTAAAGTGAGCCAAGTCTGTCCCTACAACCAGGAAATTCCCACAGATGTCCAAGCCAGCCTGGTCTCCTaGTCCAGGGGGCTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: FKVSQVCPYNQEIPTDVQASLVS*SRGLLA
Trigger: GGCCAAGAGCCCCCTGGACCAGGAGACCAGGCTGGC...TTGGACATCTGTGGGAATTTCCTGGTTGTAGGGACAGACTTGGCTCACTTTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp GTCAAAGACGGTCACTGTGTCCATTTCAACATCGTAGAAGCAGATTTTGGAATCGCAGCTGCGCCAGCCTaGTCTCCTGGTCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: VKDGHCVHFNIVEADFGIAAAPA*SPGPGG
Trigger: GCCCCCTGGACCAGGAGACCAGGCTGGCGCAGCTGC...GATTCCAAAATCTGCTTCTACGATGTTGAAATGGACACAGTGACCGTCTTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp ACTTGTTCAGGAGGTCGTGGCGCTTGCACTTCCTGTACAGCTGCTCGGCGTCCTAGCTACAGTGTGCTTTaGCCTCTCTTCGGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: TCSGGRGACTSCTAARRPSYSVL*PLFGKD
Trigger: ATCTTTCCCGAAGAGAGGCCAAAGCACACTGTAGCT...AGGACGCCGAGCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCCTGAACAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGTTCCTGGAACCCCACTaGATTTGCGTGATGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKFLEPH*ICVMFP
Trigger: AGGAAACATCACGCAAATCCAGTGGGGTTCCAGGAA...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR TCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCCCTGCAGGTCTGGGTaGACTTGCTCCCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: WKGEPDSLQRNESKNLVEPCRSG*TCSLQA
Trigger: TGCCTGGAGGGAGCAAGTTCACCCAGACCTGCAGGG...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361339.9
CDS-3UTR TCA 90 bp TTACAATGTGTAGTTGGGAGAATACGATGGAAGGGTGAACCCGACTCCCTTCAAGCAGGGCCAAGTTCATaGGCTGGTCGTCCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: LQCVVGRIRWKGEPDSLQAGPSS*AGRPGR
Trigger: ACGGCCTGGACGACCAGCTCATGAACTTGGCCCTGC...TTGAAGGGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAACTACACATTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp TTACAATGTGTAGTTGGGAGAATACGATGGAAGGGTGAACCCGACTCCCTTCAACAGGAGCGCAGGGTCTaGCGTCTCATCCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LQCVVGRIRWKGEPDSLQQERRV*RLIQVL
Trigger: GAGGACCTGGATGAGACGTCAGACCCTGCGCTCCTG...TTGAAGGGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAACTACACATTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGAAATACGATGGAAGGGTaGACCCGACTCCCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: RNESKNLVELPGTQRQVGNTMEG*TRLPSK
Trigger: CTTTGAAGGGAGTCGGGTTCACCCTTCCATCGTATT...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGAGCGGTGGTAGGTGCTaGGCAGGTGCACGCGATCGT +
Preference number: 4 (lower is better)
Translates to: WKGEPDSLQRNESKNLVESGGRC*AGARDR
Trigger: ACGATCGCGTGCACCTGCGCAGCACCTACCACCGCT...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp AGAAGTGGTTCACGGGAACATAATTTTTCAGTCCCTCATCCACAAAGAGGTGGCTGGCCAGGTGGTAGCTaGCCTGGCGCATGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: RSGSREHNFSVPHPQRGGWPGGS*PGACSS
Trigger: ACTGCTGCATGCGCCAGGGCAGCTACCACCTGGCCA...GCCACCTCTTTGTGGATGAGGGACTGAAAAATTATGTTCCCGTGAACCACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp CCACCACCGCCACAGGGTCTTATCCTTCATTTTATTCACGTAGAGCTCCAGGGACAGAAGATGCCTTTCTaGAGCAGCACGCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PPPPQGLILHFIHVELQGQKMPF*SSTLVL
Trigger: CAGGACCAGCGTGCTGCTGCAGAAAGGCATCTTCTG...TCCCTGGAGCTCTACGTGAATAAAATGAAGGATAAGACCCTGTGGCGGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp CCACCACCGCCACAGGGTCTTATCCTTCATTTTATTCACGTAGAGCTCCAGGGAAACACTCCACTGATGTaGATGTCGGTGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PPPPQGLILHFIHVELQGNTPLM*MSVRRL
Trigger: CAGCCTGCGCACCGACATGCACATCAGTGGAGTGTT...TCCCTGGAGCTCTACGTGAATAAAATGAAGGATAAGACCCTGTGGCGGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp TTACAATGTGTAGTTGGGAGAATACGATGGAAGGGTGAACCCGACTCCCTTCAATTGGGGCTGCCCGTTTaGAGACTGAGGCTGGGAGCG +
Preference number: 4 (lower is better)
Translates to: LQCVVGRIRWKGEPDSLQLGLPV*RLRLGA
Trigger: CGCTCCCAGCCTCAGTCTGCAAACGGGCAGCCCCAA...TTGAAGGGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAACTACACATTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp ACTCTGGTCCCAGAAGTGGTTCACGGGAACATAATTTTTCAGTCCCTCATCCACGGTGCTGTCCAGGTCTaGTTCCTCCAGGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: TLVPEVVHGNIIFQSLIHGAVQV*FLQEQL
Trigger: GAGCTGCTCCTGGAGGAACCAGACCTGGACAGCACC...GTGGATGAGGGACTGAAAAATTATGTTCCCGTGAACCACTTCTGGGACCAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp TTACAATGTGTAGTTGGGAGAATACGATGGAAGGGTGAACCCGACTCCCTTCAATCCTCCATGCTGTTGTaGCGGACCTGCTCGGGGACG +
Preference number: 4 (lower is better)
Translates to: LQCVVGRIRWKGEPDSLQSSMLL*RTCSGT
Trigger: CGTCCCCGAGCAGGTCCGCCACAACAGCATGGAGGA...TTGAAGGGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAACTACACATTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGGCCAAACTTCTCATCTaGACTCAGTATATAATTCTC +
Preference number: 4 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMAKLLI*TQYIIL
Trigger: GAGAATTATATACTGAGTCCAGATGAGAAGTTTGGC...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR TCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGACTTCTCGTAGTAACTaGGGGCCCGGCTGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: WKGEPDSLQRNESKNLVETSRSN*GPGCSR
Trigger: CCGACTGCAGCCGGGCCCTCAGTTACTACGAGAAGT...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp TTTAAAGTGAGCCAAGTCTGTCCCTACAACCAGGAAATTCCCACAGATGTCCAACCGTGTCTCCGGATTTaGGCAGCGCCCTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: FKVSQVCPYNQEIPTDVQPCLRI*AAPSWP
Trigger: AGGCCATGAGGGCGCTGCTCAAATCCGGAGACACGG...TTGGACATCTGTGGGAATTTCCTGGTTGTAGGGACAGACTTGGCTCACTTTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGGCTGCCTTTGCCAACTaGACCAGGTCCTCGCCAGGA +
Preference number: 4 (lower is better)
Translates to: WKGEPDSLQRNESKNLVEAAFAN*TRSSPG
Trigger: TCCTGGCGAGGACCTGGTTCAGTTGGCAAAGGCAGC...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR TCA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGATTTTCCCGCTCAGCTTaGCCTTCATCACTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: RNESKNLVELPGTQRQVGFSRSA*PSSLLL
Trigger: CAGAAGAAGTGATGAAGGTCAAGCTGAGCGGGAAAA...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR GCA 90 bp TTTAAAGTGAGCCAAGTCTGTCCCTACAACCAGGAAATTCCCACAGATGTCCAACCCTGGCGTCCTCCATaGTGTTGTGGCGGACCTGCT +
Preference number: 4 (lower is better)
Translates to: FKVSQVCPYNQEIPTDVQPWRPP*CCGGPA
Trigger: AGCAGGTCCGCCACAACAGCATGGAGGACGCCAGGG...TTGGACATCTGTGGGAATTTCCTGGTTGTAGGGACAGACTTGGCTCACTTTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGTGGGACAGAGCAAGGTaGAGACGGGTCACACCCTCC +
Preference number: 4 (lower is better)
Translates to: WKGEPDSLQRNESKNLVEWDRAR*RRVTPS
Trigger: GGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TTACAATGTGTAGTTGGGAGAATACGATGGAAGGGTGAACCCGACTCCCTTCAAGGTGCTGTCCAGGTCTaGTTCCTCCAGGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LQCVVGRIRWKGEPDSLQGAVQV*FLQEQL
Trigger: GAGCTGCTCCTGGAGGAACCAGACCTGGACAGCACC...TTGAAGGGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAACTACACATTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp AGAAGTGGTTCACGGGAACATAATTTTTCAGTCCCTCATCCACAAAGAGGTGGCCGTAGTAGGACATGTTaGCCAAGGGAAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: RSGSREHNFSVPHPQRGGRSRTC*PREAAA
Trigger: GGCGGCGGCTTCCCTTGGCCAACATGTCCTACTACG...GCCACCTCTTTGTGGATGAGGGACTGAAAAATTATGTTCCCGTGAACCACTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp TTTAAAGTGAGCCAAGTCTGTCCCTACAACCAGGAAATTCCCACAGATGTCCAATCCTCCATGCTGTTGTaGCGGACCTGCTCGGGGACG +
Preference number: 4 (lower is better)
Translates to: FKVSQVCPYNQEIPTDVQSSMLL*RTCSGT
Trigger: CGTCCCCGAGCAGGTCCGCCACAACAGCATGGAGGA...TTGGACATCTGTGGGAATTTCCTGGTTGTAGGGACAGACTTGGCTCACTTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp GTCAAAGACGGTCACTGTGTCCATTTCAACATCGTAGAAGCAGATTTTGGAATCAGTGTTGGTGGCCGGTaGGCAGAGCCTAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VKDGHCVHFNIVEADFGISVGGR*AEPSRG
Trigger: CCCCCTGCTAGGCTCTGCCCACCGGCCACCAACACT...GATTCCAAAATCTGCTTCTACGATGTTGAAATGGACACAGTGACCGTCTTTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGTCATCCACAAAGAGGTaGCTCTTATTAGTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKSSTKR*LLLVSC
Trigger: GCAAGAGACTAATAAGAGCCACCTCTTTGTGGATGA...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp TTACAATGTGTAGTTGGGAGAATACGATGGAAGGGTGAACCCGACTCCCTTCAAGCAGCTCACACTGCTTaGTGGACTCCTTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LQCVVGRIRWKGEPDSLQAAHTA*WTPWGP
Trigger: AGGACCCCAAGGAGTCCATCAAGCAGTGTGAGCTGC...TTGAAGGGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAACTACACATTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGGGGTCTTCACGCACATaGGCGCCATGTTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: WKGEPDSLQRNESKNLVEGSSRT*APCSPR
Trigger: TCTGGGAGAACATGGCGCGCATGTGCGTGAAGACCC...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TTACAATGTGTAGTTGGGAGAATACGATGGAAGGGTGAACCCGACTCCCTTCAACACTTCCTGTACAGCTaGTCGGCGTCCTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: LQCVVGRIRWKGEPDSLQHFLYS*SASSSM
Trigger: CATGCTGGAGGACGCCGAGCAGCTGTACAGGAAGTG...TTGAAGGGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAACTACACATTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361339.9
ENST00000426508.7
CDS-3UTR GCA 90 bp ACTCTGGTCCCAGAAGTGGTTCACGGGAACATAATTTTTCAGTCCCTCATCCACCAGCCTTCTGGACATTaGCCTGGAAGCAGTGGATGC +
Preference number: 4 (lower is better)
Translates to: TLVPEVVHGNIIFQSLIHQPSGH*PGSSGC
Trigger: GCATCCACTGCTTCCAGGGCAATGTCCAGAAGGCTG...GTGGATGAGGGACTGAAAAATTATGTTCCCGTGAACCACTTCTGGGACCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp CCACCACCGCCACAGGGTCTTATCCTTCATTTTATTCACGTAGAGCTCCAGGGAGTCTCGTTGGCTATTTaGGCAGCCTTCTGGACATTG +
Preference number: 4 (lower is better)
Translates to: PPPPQGLILHFIHVELQGVSLAI*AAFWTL
Trigger: CAATGTCCAGAAGGCTGCGCAAATAGCCAACGAGAC...TCCCTGGAGCTCTACGTGAATAAAATGAAGGATAAGACCCTGTGGCGGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCCAGGCCGTTCTCCTTaGACAGGCGGATGGCATTCT +
Preference number: 4 (lower is better)
Translates to: WKGEPDSLQRNESKNLVEPGRSP*TGGWHS
Trigger: AGAATGCCATCCGCCTGTGCAAGGAGAACGGCCTGG...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCATAGACGTCCCCGATaGGGATGGTGCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: WKGEPDSLQRNESKNLVEHRRPR*GWCCPG
Trigger: ACCTGGACAGCACCATCCGCATCGGGGACGTCTATG...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TTACAATGTGTAGTTGGGAGAATACGATGGAAGGGTGAACCCGACTCCCTTCAAAGGGCCTTGGAGAAGTaGCCAGCCTTGTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: LQCVVGRIRWKGEPDSLQRALEK*PALWYS
Trigger: GCTGTACCACAAGGCTGGCCACTTCTCCAAGGCCCT...TTGAAGGGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAACTACACATTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACTGCCAAGAATGGATaGACAGGGTGCCAGCTGATA +
Preference number: 4 (lower is better)
Translates to: EPDSLQRNESKNLVELPGTAKNG*TGCQLI
Trigger: TATCAGCTGGCACCCTGTCCATCCATTCTTGGCAGT...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
3UTR CAA 72 bp CAGAAAATAAACTGCTTTATTGGAATTACAGGAGTGTaGGTGGCCGGTGGGCAGAGCCTAGCAGGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: QKINCFIGITGV*VAGGQSLAGGA
Trigger: TGCACCCCCTGCTAGGCTCTGCCCACCGGCCACCAACACTCCTGTAATTCCAATAAAGCAGTTTATTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp TTACAATGTGTAGTTGGGAGAATACGATGGAAGGGTGAACCCGACTCCCTTCAACATAATAGAGGGCCATaGCGGAACTCAGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LQCVVGRIRWKGEPDSLQHNRGP*RNSGLL
Trigger: GAGGAGGCCTGAGTTCCGTCATGGCCCTCTATTATG...TTGAAGGGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAACTACACATTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TTTAAAGTGAGCCAAGTCTGTCCCTACAACCAGGAAATTCCCACAGATGTCCAATGTAGGGCCACAAACTaGTGGGTGGCAAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FKVSQVCPYNQEIPTDVQCRATN*WVAKAS
Trigger: GCTGGCCTTTGCCACCCAGCAGTTTGTGGCCCTACA...TTGGACATCTGTGGGAATTTCCTGGTTGTAGGGACAGACTTGGCTCACTTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGGAACCTCTTCACCAGTaGCATCCTGCTCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: WKGEPDSLQRNESKNLVEEPLHQ*HPALQL
Trigger: CAGCTGCAGAGCAGGATGGCACTGGTGAAGAGGTTC...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCTGCTGCTCCTTGTCCTaGTTGTTAAACACCGTCACT +
Preference number: 4 (lower is better)
Translates to: EPDSLQRNESKNLVELPGCCSLS*LLNTVT
Trigger: AGTGACGGTGTTTAACAAGCAGGACAAGGAGCAGCA...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TTTAAAGTGAGCCAAGTCTGTCCCTACAACCAGGAAATTCCCACAGATGTCCAAAGGGCCTTGGAGAAGTaGCCAGCCTTGTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: FKVSQVCPYNQEIPTDVQRALEK*PALWYS
Trigger: GCTGTACCACAAGGCTGGCCACTTCTCCAAGGCCCT...TTGGACATCTGTGGGAATTTCCTGGTTGTAGGGACAGACTTGGCTCACTTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGGGCCCTGCAGGAGTATaGGGAGGATATGATGTGTGG +
Preference number: 4 (lower is better)
Translates to: WKGEPDSLQRNESKNLVEGPAGV*GGYDVW
Trigger: CCACACATCATATCCTCCCCATACTCCTGCAGGGCC...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TTACAATGTGTAGTTGGGAGAATACGATGGAAGGGTGAACCCGACTCCCTTCAAATGGCGGCCACTTGCTaGTGGAAGTGTGACGACATG +
Preference number: 4 (lower is better)
Translates to: LQCVVGRIRWKGEPDSLQMAATC*WKCDDM
Trigger: CATGTCGTCACACTTCCACCAGCAAGTGGCCGCCAT...TTGAAGGGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAACTACACATTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR TCA 90 bp TTTAAAGTGAGCCAAGTCTGTCCCTACAACCAGGAAATTCCCACAGATGTCCAACCAGGTCCTCTGCTATaGGCTGTAGGGCCACAAACT +
Preference number: 4 (lower is better)
Translates to: FKVSQVCPYNQEIPTDVQPGPLL*AVGPQT
Trigger: AGTTTGTGGCCCTACAGCTCATAGCAGAGGACCTGG...TTGGACATCTGTGGGAATTTCCTGGTTGTAGGGACAGACTTGGCTCACTTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGTGCCAGGTTCGAACTTaGACTCGGTTTGACTCCACC +
Preference number: 4 (lower is better)
Translates to: WKGEPDSLQRNESKNLVECQVRT*TRFDST
Trigger: GGTGGAGTCAAACCGAGTTCAAGTTCGAACCTGGCA...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCAAAAATTCCAGAAGATaGCTTTCTGCAGCAGCACGC +
Preference number: 4 (lower is better)
Translates to: EPDSLQRNESKNLVELPGKNSRR*LSAAAR
Trigger: GCGTGCTGCTGCAGAAAGGCATCTTCTGGAATTTTT...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR GCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGAGGGGCATCGTGTGCTaGTCCTTGTCCTGCTTGTTA +
Preference number: 4 (lower is better)
Translates to: WKGEPDSLQRNESKNLVERGIVC*SLSCLL
Trigger: TAACAAGCAGGACAAGGAGCAGCACACGATGCCCCT...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TTACAATGTGTAGTTGGGAGAATACGATGGAAGGGTGAACCCGACTCCCTTCAATTGTTCAGGAGGTCGTaGCGCTTGCACTTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: LQCVVGRIRWKGEPDSLQLFRRS*RLHFLY
Trigger: GTACAGGAAGTGCAAGCGCCACGACCTCCTGAACAA...TTGAAGGGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAACTACACATTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TTACAATGTGTAGTTGGGAGAATACGATGGAAGGGTGAACCCGACTCCCTTCAAATTTGCGCAGCCTTCTaGACATTGCCCTGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LQCVVGRIRWKGEPDSLQICAAF*TLPWKQ
Trigger: CTGCTTCCAGGGCAATGTCCAGAAGGCTGCGCAAAT...TTGAAGGGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAACTACACATTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGAGATTTCCTTCTGCCTaGACACGCTCGCGAAGAACG +
Preference number: 4 (lower is better)
Translates to: WKGEPDSLQRNESKNLVERFPSA*TRSRRT
Trigger: CGTTCTTCGCGAGCGTGTCCAGGCAGAAGGAAATCT...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp AGAAGTGGTTCACGGGAACATAATTTTTCAGTCCCTCATCCACAAAGAGGTGGCGTTGGGAGAATACGATaGAAGGGTGAACCCGACTCC +
Preference number: 4 (lower is better)
Translates to: RSGSREHNFSVPHPQRGGVGRIR*KGEPDS
Trigger: GGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAAC...GCCACCTCTTTGTGGATGAGGGACTGAAAAATTATGTTCCCGTGAACCACTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CCA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCCGTAGAAGCAGATTTTaGAATCAGGGCTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: EPDSLQRNESKNLVELPGRRSRF*NQGCCQ
Trigger: CTGACAACAGCCCTGATTCCAAAATCTGCTTCTACG...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
3UTR CAA 72 bp TCCCAGACGGCCTCACTTTTGATGAGCTTGATGGATTaGAAGGCTTCGTCCATGTCTCCTATGGTGACAAAG +
Preference number: 4 (lower is better)
Translates to: SQTASLLMSLMD*KASSMSPMVTK
Trigger: CTTTGTCACCATAGGAGACATGGACGAAGCCTTCAAATCCATCAAGCTCATCAAAAGTGAGGCCGTCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp GTCAAAGACGGTCACTGTGTCCATTTCAACATCGTAGAAGCAGATTTTGGAATCGAACCTCTTCACCAGTaGCATCCTGCTCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VKDGHCVHFNIVEADFGIEPLHQ*HPALQL
Trigger: CAGCTGCAGAGCAGGATGGCACTGGTGAAGAGGTTC...GATTCCAAAATCTGCTTCTACGATGTTGAAATGGACACAGTGACCGTCTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp CCCCGTGGGCTTTGTCGTAGTTCTGGTATTCATCAATCTCCACCTGGGCACAAGCTCTTATTAGTCTCTTaGTCATTAAAGGACAGCGTC +
Preference number: 4 (lower is better)
Translates to: PRGLCRSSGIHQSPPGHKLLLVS*SLKDSV
Trigger: GACGCTGTCCTTTAATGAGCAAGAGACTAATAAGAG...CTTGTGCCCAGGTGGAGATTGATGAATACCAGAACTACGACAAAGCCCACGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR GCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCCACCTGAGTGGTCTTaGCCTTCTCATCCACATAGT +
Preference number: 4 (lower is better)
Translates to: WKGEPDSLQRNESKNLVEPPEWS*PSHPHS
Trigger: ACTATGTGGATGAGAAGGGCAAGACCACTCAGGTGG...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR GCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGGAACCCCACTGGATTTaGGTGATGTTTCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: WKGEPDSLQRNESKNLVEEPHWI*VMFPWS
Trigger: GCTCCAAGGAAACATCACGCAAATCCAGTGGGGTTC...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR CCA 90 bp GTCAAAGACGGTCACTGTGTCCATTTCAACATCGTAGAAGCAGATTTTGGAATCGGCCCTGCAGGAGTATaGGGAGGATATGATGTGTGG +
Preference number: 4 (lower is better)
Translates to: VKDGHCVHFNIVEADFGIGPAGV*GGYDVW
Trigger: CCACACATCATATCCTCCCCATACTCCTGCAGGGCC...GATTCCAAAATCTGCTTCTACGATGTTGAAATGGACACAGTGACCGTCTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CAA 72 bp AAGGACAGCGTCTCTCTCCGATCAATTTGTCCAGTCTaGAAGTCAAAGACGGTCACTGTGTCCATTTCAACA +
Preference number: 4 (lower is better)
Translates to: KDSVSLRSICPV*KSKTVTVSIST
Trigger: TGTTGAAATGGACACAGTGACCGTCTTTGACTTCAAGACTGGACAAATTGATCGGAGAGAGACGCTGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
3UTR CAA 72 bp TTGCTCATTAAAGGACAGCGTCTCTCTCCGATCAATTaGTCCAGTCTTGAAGTCAAAGACGGTCACTGTGTC +
Preference number: 4 (lower is better)
Translates to: LLIKGQRLSPIN*SSLEVKDGHCV
Trigger: GACACAGTGACCGTCTTTGACTTCAAGACTGGACAAATTGATCGGAGAGAGACGCTGTCCTTTAATGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR TCA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTCCCTTCAAAGGAATaGATCCAAAAATCTAGTGGA +
Preference number: 4 (lower is better)
Translates to: WKGEPDSLQRNESKNLVELPSKE*IQKSSG
Trigger: TCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAG...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CCA 90 bp GTCAAAGACGGTCACTGTGTCCATTTCAACATCGTAGAAGCAGATTTTGGAATCCGTAGAAGCAGATTTTaGAATCAGGGCTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: VKDGHCVHFNIVEADFGIRRSRF*NQGCCQ
Trigger: CTGACAACAGCCCTGATTCCAAAATCTGCTTCTACG...GATTCCAAAATCTGCTTCTACGATGTTGAAATGGACACAGTGACCGTCTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS GCA 90 bp AGCTGCGTGGCCAGCACGGCCACGCGGGCCTCTAGCTCCGGCTCCTaGTCCGCCTCACGCAGCGCTCGGGCCCCGCGGGCATGGCCCATG +
Preference number: 5 (lower is better)
Translates to: SCVASTATRASSSGS*SASRSARAPRAWPM
Trigger: CATGGGCCATGCCCGCGGGGCCCGAGCGCTGCGTGAGGCGGAGCAGGAGCCGGAGCTAGAGGCCCGCGTGGCCGTGCTGGCCACGCAGCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000426508.7
ENST00000565298.5
CDS CCA 90 bp ATGGGACTCGCGAGGGGCCGCGGGGACTCGGCGGCGCCGGGATCGTaGGAGGAGACGGGAGGGTCCCGACGCCCGCCACCGGTCACATCC +
Preference number: 5 (lower is better)
Translates to: MGLARGRGDSAAPGS*EETGGSRRPPPVTS
Trigger: GGATGTGACCGGTGGCGGGCGTCGGGACCCTCCCGTCTCCTCCCACGATCCCGGCGCCGCCGAGTCCCCGCGGCCCCTCGCGAGTCCCAT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569646.5
CDS GCA 90 bp TTCCCACCCACCCCATGGCGGGCGCCCCTCACCAGCATGCCCAGCTaGGTGGCCAGCACGGCCACGCGGGCCTCTAGCTCCGGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: FPPTPWRAPLTSMPS*VASTATRASSSGSC
Trigger: GCAGGAGCCGGAGCTAGAGGCCCGCGTGGCCGTGCTGGCCACGCAGCTGGGCATGCTGGTGAGGGGCGCCCGCCATGGGGTGGGTGGGAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS GCA 90 bp GTGGTGCCTTCCCACCCACCCCATGGCGGGCGCCCCTCACCAGCATaGCCAGCTGCGTGGCCAGCACGGCCACGCGGGCCTCTAGCTCCG +
Preference number: 5 (lower is better)
Translates to: VVPSHPPHGGRPSPA*PAAWPARPRGPLAP
Trigger: CGGAGCTAGAGGCCCGCGTGGCCGTGCTGGCCACGCAGCTGGGCATGCTGGTGAGGGGCGCCCGCCATGGGGTGGGTGGGAAGGCACCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS CCA 90 bp TCCGGCTCCTGCTCCGCCTCACGCAGCGCTCGGGCCCCGCGGGCATaGCCCATGTTCCCCAGGCACACCTTGGCCACGTCCAGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: SGSCSASRSARAPRA*PMFPRHTLATSSRW
Trigger: CCAGCGGCTGGACGTGGCCAAGGTGTGCCTGGGGAACATGGGCCATGCCCGCGGGGCCCGAGCGCTGCGTGAGGCGGAGCAGGAGCCGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000426508.7
ENST00000565298.5
CDS TCA 90 bp GTTGCCGGGACAACGGCGCGCCAGGAACGCGGAAATAGCCGAAGGTaGGCGAGGCGGCCCCGAGGACTCCCGAAGCGCCCCGAGCGGCCG +
Preference number: 5 (lower is better)
Translates to: VAGTTARQERGNSRR*ARRPRGLPKRPERP
Trigger: CGGCCGCTCGGGGCGCTTCGGGAGTCCTCGGGGCCGCCTCGCTCACCTTCGGCTATTTCCGCGTTCCTGGCGCGCCGTTGTCCCGGCAAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS GCA 90 bp CGCCCCGAGCGGCCGGAAAGAGCCGAAGGCGATCGGGCACGCACGTaGAGCTCCGAGGCCCGAGCGTCGGGGGCCAGGTTATTCCGCTTG +
Preference number: 5 (lower is better)
Translates to: RPERPERAEGDRART*SSEARASGARLFRL
Trigger: CAAGCGGAATAACCTGGCCCCCGACGCTCGGGCCTCGGAGCTGCACGTGCGTGCCCGATCGCCTTCGGCTCTTTCCGGCCGCTCGGGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS CCA 90 bp CCCGACGCCCGCCACCGGTCACATCCTCGGCCCCAAACCCCGGCCTaGCTCCTAAGGACCTGGGTCGGCCGCCCTAGCCCTAAGGCCACT +
Preference number: 5 (lower is better)
Translates to: PDARHRSHPRPQTPA*LLRTWVGRPSPKAT
Trigger: AGTGGCCTTAGGGCTAGGGCGGCCGACCCAGGTCCTTAGGAGCCAGGCCGGGGTTTGGGGCCGAGGATGTGACCGGTGGCGGGCGTCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569646.5
CDS-3UTR CAA 90 bp ACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGTTCCGGGTGTCCCAGCTGTaGCTCAGGAGCCGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: TEQGADGSHPPPARAAAFRVSQL*LRSRGP
Trigger: GGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCG...GAACGCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS CCA 90 bp GCGCTCGGGCCCCGCGGGCATGGCCCATGTTCCCCAGGCACACCTTaGCCACGTCCAGCCGCTGGGTCTTCACGCACATGCGCGCCATGT +
Preference number: 5 (lower is better)
Translates to: ALGPRGHGPCSPGTP*PRPAAGSSRTCAPC
Trigger: ACATGGCGCGCATGTGCGTGAAGACCCAGCGGCTGGACGTGGCCAAGGTGTGCCTGGGGAACATGGGCCATGCCCGCGGGGCCCGAGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000426508.7
ENST00000565298.5
CDS-3UTR CAA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGCCAGCGCGCCCATCTaGGGGCTGCCCGTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQASAPI*GLPVCR
Trigger: TCTGCAAACGGGCAGCCCCAAGATGGGCGCGCTGGC...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS GCA 90 bp TGCCCAGCTCTCCTGGGTCATGCCTCTCGGCTCTGCCCACATCAGTaGAGGCTCAGGCCGGTGGGCGTGCCTCCTCCTTCCCCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: CPALLGHASRLCPHQ*RLRPVGVPPPSPGG
Trigger: GCCCCCTGGGGAAGGAGGAGGCACGCCCACCGGCCTGAGCCTGCACTGATGTGGGCAGAGCCGAGAGGCATGACCCAGGAGAGCTGGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS-3UTR CAA 90 bp GCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCTCCGTGTCTCCGGATTaGAGCAGCGCCCTCATGGCC +
Preference number: 5 (lower is better)
Translates to: AAAKARVSQLLLRSRGPCSVSPD*SSALMA
Trigger: GGCCATGAGGGCGCTGCTCAAATCCGGAGACACGGA...GCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp ACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGTTCAGGGGGCTCTTGGCCTaGGCCTTGGCCAGGCACTTG +
Preference number: 5 (lower is better)
Translates to: TEQGADGSHPPPARAAAFRGLLA*ALARHL
Trigger: CAAGTGCCTGGCCAAGGCCAAGGCCAAGAGCCCCCT...GAACGCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTTGGTCCAGGGGGCTCTaGGCCTTGGCCTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSWSRGL*ALALAR
Trigger: CCTGGCCAAGGCCAAGGCCAAGAGCCCCCTGGACCA...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACGCGTCCTCCATGCTGTaGTGGCGGACCTGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHASSML*WRTCSG
Trigger: CCCCGAGCAGGTCCGCCACAACAGCATGGAGGACGC...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS TCA 90 bp CGCCAGGCCACCGGTCACCGCACCTTCCCACACCGCCAAGCACACTaGCACACGGGGCCGCTGTGGGCACAGCAAACGCCACACACCCAC +
Preference number: 5 (lower is better)
Translates to: RQATGHRTFPHRQAH*HTGPLWAQQTPHTH
Trigger: GTGGGTGTGTGGCGTTTGCTGTGCCCACAGCGGCCCCGTGTGTCAGTGTGCTTGGCGGTGTGGGAAGGTGCGGTGACCGGTGGCCTGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS GCA 90 bp CCACCTCACCTCCACCGCCGCTGTCTGCCCAGCTCTCCTGGGTCATaGCTCTCGGCTCTGCCCACATCAGTGCAGGCTCAGGCCGGTGGG +
Preference number: 5 (lower is better)
Translates to: PPHLHRRCLPSSPGS*LSALPTSVQAQAGG
Trigger: CCCACCGGCCTGAGCCTGCACTGATGTGGGCAGAGCCGAGAGGCATGACCCAGGAGAGCTGGGCAGACAGCGGCGGTGGAGGTGAGGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS GCA 90 bp GGCGGTCGCCTAGCCTCCACCCACCTCACCTCCACCGCCGCTGTCTaGCCAGCTCTCCTGGGTCATGCCTCTCGGCTCTGCCCACATCAG +
Preference number: 5 (lower is better)
Translates to: GGRLASTHLTSTAAV*PALLGHASRLCPHQ
Trigger: CTGATGTGGGCAGAGCCGAGAGGCATGACCCAGGAGAGCTGGGCAGACAGCGGCGGTGGAGGTGAGGTGGGTGGAGGCTAGGCGACCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS CCA 90 bp TCGGGCGCTCTGTTCCAGGCCCACACACCTGACAGGCACACACCCTaGAGAGCCGGCGGTCGCCTAGCCTCCACCCACCTCACCTCCACC +
Preference number: 5 (lower is better)
Translates to: SGALFQAHTPDRHTP*RAGGRLASTHLTST
Trigger: GGTGGAGGTGAGGTGGGTGGAGGCTAGGCGACCGCCGGCTCTCCAGGGTGTGTGCCTGTCAGGTGTGTGGGCCTGGAACAGAGCGCCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS-3UTR CAA 90 bp CCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGACAGGTCTGGGTGAACTaGCTCCCTCCAGGCACACGG +
Preference number: 5 (lower is better)
Translates to: PPRPGCPSCCSGAVGPAGQVWVN*LPPGTR
Trigger: CCGTGTGCCTGGAGGGAGCAAGTTCACCCAGACCTG...TCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361339.9
CDS-3UTR CAA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGGGGGCTCTTGGCCTaGGCCTTGGCCAGGCACTTG +
Preference number: 5 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHRGLLA*ALARHL
Trigger: CAAGTGCCTGGCCAAGGCCAAGGCCAAGAGCCCCCT...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp TGGGACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGGAATTACAGGAGTGTaGGTGGCCGGTGGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: WDRARCRRVTPSAGPGRCGITGV*VAGGQS
Trigger: GCTCTGCCCACCGGCCACCAACACTCCTGTAATTCC...GCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp TCTCCTGGTCCAGGGGGCTCTTGGCCTTGGCCTTGGCCAGGCACTTGTAGGCCTGCGTCCCGGGTGGCCTaGTCGCAGTCCTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: SPGPGGSWPWPWPGTCRPASRVA*SQSSSP
Trigger: GGGGCTGGAGGACTGCGACAAGGCCACCCGGGACGC...AGGCCTACAAGTGCCTGGCCAAGGCCAAGGCCAAGAGCCCCCTGGACCAGGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS TCA 90 bp CCCCACCCCGGGCCCGTGGTACCTTGCACAGGCGGATGGCATTCTTaGAGGCCTGTGCCCGGGTGTAGAAGTGCACCGCCTGCCCGACCT +
Preference number: 5 (lower is better)
Translates to: PHPGPVVPCTGGWHS*RPVPGCRSAPPARP
Trigger: AGGTCGGGCAGGCGGTGCACTTCTACACCCGGGCACAGGCCTTCAAGAATGCCATCCGCCTGTGCAAGGTACCACGGGCCCGGGGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS GCA 90 bp GGGCCTTCACCCATCGGCTCCGCCCCTGGGCAAGACTGCAGGCCATaGAGAGAGGTGCCCGTCACGAGTCCCACGGCCTTCCTAACCCCA +
Preference number: 5 (lower is better)
Translates to: GPSPIGSAPGQDCRP*REVPVTSPTAFLTP
Trigger: TGGGGTTAGGAAGGCCGTGGGACTCGTGACGGGCACCTCTCTGCATGGCCTGCAGTCTTGCCCAGGGGCGGAGCCGATGGGTGAAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566818.1
CDS-3UTR CAA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGAGGAGGTCGTGGCGCTaGCACTTCCTGTACAGCTGC +
Preference number: 5 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQRRSWR*HFLYSC
Trigger: GCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCCT...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGGCGGATGGCATTCTaGAAGGCCTGTGCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRRRMAF*KACARV
Trigger: CACCCGGGCACAGGCCTTCAAGAATGCCATCCGCCT...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp GCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCATGGCCTTCAGCTTGTaGCCGGCCTGCGTGTACTTC +
Preference number: 5 (lower is better)
Translates to: AAAKARVSQLLLRSRGPCMAFSL*PACVYF
Trigger: GAAGTACACGCAGGCCGGCAACAAGCTGAAGGCCAT...GCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACTCCGTGTCTCCGGATTaGAGCAGCGCCCTCATGGCC +
Preference number: 5 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHSVSPD*SSALMA
Trigger: GGCCATGAGGGCGCTGCTCAAATCCGGAGACACGGA...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp AGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGGGGCTGTTGTCAGCCTaGCTGGGGAGGATGCTGATG +
Preference number: 5 (lower is better)
Translates to: SRGCSRQGPGVPAVAQEPGLLSA*LGRMLM
Trigger: CATCAGCATCCTCCCCAGCAAGGCTGACAACAGCCC...CGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS TCA 90 bp CCGCCTCGATCATGTCCTCGGGGGAGCTCAGCAGGGCCAAGTTCATaGGCTGGTCGTCCAGGCCGTTCTCCTGCAGGGAGGGAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: PPRSCPRGSSAGPSS*AGRPGRSPAGREAG
Trigger: CCCTGCCTCCCTCCCTGCAGGAGAACGGCCTGGACGACCAGCTCATGAACTTGGCCCTGCTGAGCTCCCCCGAGGACATGATCGAGGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS-3UTR CAA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGGAGGTCGTGGCGCTaGCACTTCCTGTACAGCTGC +
Preference number: 5 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRRRSWR*HFLYSC
Trigger: GCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCCT...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTTCCAGGCCGTTCTCCTaGCACAGGCGGATGGCATTC +
Preference number: 5 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSSRPFS*HRRMAF
Trigger: GAATGCCATCCGCCTGTGCAAGGAGAACGGCCTGGA...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGGAGAAGTGGCCAGCCTaGTGGTACAGCATGACCGCC +
Preference number: 5 (lower is better)
Translates to: SLAGGAAAKARVSQLLLREKWPA*WYSMTA
Trigger: GGCGGTCATGCTGTACCACAAGGCTGGCCACTTCTC...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp AGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGATGGCCTTCAGCTTGTaGCCGGCCTGCGTGTACTTC +
Preference number: 5 (lower is better)
Translates to: SRQGPGVPAVAQEPWALQMAFSL*PACVYF
Trigger: GAAGTACACGCAGGCCGGCAACAAGCTGAAGGCCAT...CTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp ACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGTTCAGCAGCTCACACTGCTaGATGGACTCCTTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: TEQGADGSHPPPARAAAFSSSHC*MDSLGS
Trigger: GGACCCCAAGGAGTCCATCAAGCAGTGTGAGCTGCT...GAACGCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTGGGCTGTTGTCAGCCTaGCTGGGGAGGATGCTGATG +
Preference number: 5 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSGLLSA*LGRMLM
Trigger: CATCAGCATCCTCCCCAGCAAGGCTGACAACAGCCC...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp GCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGGCCAGCGCGCCCATCTaGGGGCTGCCCGTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: ARAAAFSPSSVAYSNTDMASAPI*GLPVCR
Trigger: TCTGCAAACGGGCAGCCCCAAGATGGGCGCGCTGGC...CATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp CCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGATTGCACTCGGCCCCTTaGGTCCAACCTCCACAAGAG +
Preference number: 5 (lower is better)
Translates to: PPRPGCPSCCSGAVGPAGLHSAP*VQPPQE
Trigger: CTCTTGTGGAGGTTGGACCAAAGGGGCCGAGTGCAA...TCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS GCA 90 bp GGCCCGTGGTACCTTGCACAGGCGGATGGCATTCTTGAAGGCCTGTaGCCGGGTGTAGAAGTGCACCGCCTGCCCGACCTCCTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: GPWYLAQADGILEGL*PGVEVHRLPDLLLA
Trigger: AGCCAGGAGGAGGTCGGGCAGGCGGTGCACTTCTACACCCGGGCACAGGCCTTCAAGAATGCCATCCGCCTGTGCAAGGTACCACGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS CCA 90 bp GCATGGCCCATGTTCCCCAGGCACACCTTGGCCACGTCCAGCCGCTaGGTCTTCACGCACATGCGCGCCATGTTCTCCCAGACGGCCTCA +
Preference number: 5 (lower is better)
Translates to: AWPMFPRHTLATSSR*VFTHMRAMFSQTAS
Trigger: TGAGGCCGTCTGGGAGAACATGGCGCGCATGTGCGTGAAGACCCAGCGGCTGGACGTGGCCAAGGTGTGCCTGGGGAACATGGGCCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000426508.7
ENST00000565298.5
CDS CCA 90 bp TCGATCATGTCCTCGGGGGAGCTCAGCAGGGCCAAGTTCATGAGCTaGTCGTCCAGGCCGTTCTCCTGCAGGGAGGGAGGCAGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: SIMSSGELSRAKFMS*SSRPFSCREGGRAL
Trigger: CAGGGCCCTGCCTCCCTCCCTGCAGGAGAACGGCCTGGACGACCAGCTCATGAACTTGGCCCTGCTGAGCTCCCCCGAGGACATGATCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS-3UTR CAA 90 bp GCAGCAGTCTGCTATCTGCTCCAGCAGCTCCCGCCGCGACTCCTCAGGCAGGTCAGGCGGATGGCATTCTaGAAGGCCTGTGCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: AAVCYLLQQLPPRLLRQVRRMAF*KACARV
Trigger: CACCCGGGCACAGGCCTTCAAGAATGCCATCCGCCT...GACCTGCCTGAGGAGTCGCGGCGGGAGCTGCTGGAGCAGATAGCAGACTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CAA 90 bp GCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACTCATGGCCTTCAGCTaGTTGCCGGCCTGCGTGTAC +
Preference number: 5 (lower is better)
Translates to: AGPGRCVLAQLCRVFQHRLMAFS*LPACVY
Trigger: GTACACGCAGGCCGGCAACAAGCTGAAGGCCATGAG...TCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCAGCTCACACTGCTaGATGGACTCCTTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRSSSHC*MDSLGS
Trigger: GGACCCCAAGGAGTCCATCAAGCAGTGTGAGCTGCT...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp GCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCCAGCTACAGTGTGCTTaGGCCTCTCTTCGGGAAAGA +
Preference number: 5 (lower is better)
Translates to: AAAKARVSQLLLRSRGPCQLQCA*ASLRER
Trigger: TCTTTCCCGAAGAGAGGCCAAAGCACACTGTAGCTG...GCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp TGGGACAGAGCAAGGTGCAGACGGGTCACACCCTCCGCCGGCCCGGGCCGCTGCGGAACCCCACTGGATTaGCGTGATGTTTCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: WDRARCRRVTPSAGPGRCGTPLD*RDVSLE
Trigger: CTCCAAGGAAACATCACGCAAATCCAGTGGGGTTCC...GCAGCGGCCCGGGCCGGCGGAGGGTGTGACCCGTCTGCACCTTGCTCTGTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS TCA 90 bp CAGACTCGGGGAGACCTGCATGGCGGCCACTTGCTGGTGGAAGTGTaGCGACATGGCCCGCTCGCTGAGGATGGCCACGGAGATGACGCT +
Preference number: 5 (lower is better)
Translates to: QTRGDLHGGHLLVEV*RHGPLAEDGHGDDA
Trigger: AGCGTCATCTCCGTGGCCATCCTCAGCGAGCGGGCCATGTCGTCACACTTCCACCAGCAAGTGGCCGCCATGCAGGTCTCCCCGAGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
CDS CCA 90 bp TGGGCAGAGGGGTGGGCGGGTGAGGCAGACGGGGTGAGCAGTGAGTaGCAGACACTGGCCGGACCACGTGTCACTGACACGATTCTCTCT +
Preference number: 5 (lower is better)
Translates to: WAEGWAGEADGVSSE*QTLAGPRVTDTILS
Trigger: AGAGAGAATCGTGTCAGTGACACGTGGTCCGGCCAGTGTCTGCCACTCACTGCTCACCCCGTCTGCCTCACCCGCCCACCCCTCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS-3UTR CAA 90 bp CAGGGGTCTCCTGGACACCATCTGAGGGATGTGGTGGCACCCAGGCTCCACCTCTCCGTGTCTCCGGATTaGAGCAGCGCCCTCATGGCC +
Preference number: 5 (lower is better)
Translates to: QGSPGHHLRDVVAPRLHLSVSPD*SSALMA
Trigger: GGCCATGAGGGCGCTGCTCAAATCCGGAGACACGGA...GAGGTGGAGCCTGGGTGCCACCACATCCCTCAGATGGTGTCCAGGAGACCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CAA 90 bp TCTCCTGGACACCATCTGAGGGATGTGGTGGCACCCAGGCTCCACCTCGTCTTCGCGTCCTCCATGCTGTaGTGGCGGACCTGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: SPGHHLRDVVAPRLHLVFASSML*WRTCSG
Trigger: CCCCGAGCAGGTCCGCCACAACAGCATGGAGGACGC...GAAGACGAGGTGGAGCCTGGGTGCCACCACATCCCTCAGATGGTGTCCAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CAA 90 bp AGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTATGGGGAGGATATGATGTGCGGGTGTCCCAGCTGTaGCTCAGGAGCCGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: SCCSGAVGPAGVWGGYDVRVSQL*LRSRGP
Trigger: GGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCG...CACATCATATCCTCCCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGCGGGTGTCCCAGCTGTaGCTCAGGAGCCGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKRVSQL*LRSRGP
Trigger: GGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCG...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACACTGCGACAGCATCCTaGGTGGCAAACACTCCACTG +
Preference number: 5 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHTATAS*VANTPL
Trigger: CAGTGGAGTGTTTGCCACCAAGGATGCTGTCGCAGT...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp GCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGAGCCAGGTTATTCCGCTaGCCTCAGACGTGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: AGPGRCVLAQLCRVFQHRARLFR*PQTCFH
Trigger: GTGGAAGCACGTCTGAGGCAAGCGGAATAACCTGGC...TCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS GCA 90 bp ACCCCCGTGGACAGGAAGCACACATTCAGCAGACTCGGGGAGACCTaGATGGCGGCCACTTGCTGGTGGAAGTGTGACGACATGGCCCGC +
Preference number: 5 (lower is better)
Translates to: TPVDRKHTFSRLGET*MAATCWWKCDDMAR
Trigger: GCGGGCCATGTCGTCACACTTCCACCAGCAAGTGGCCGCCATGCAGGTCTCCCCGAGTCTGCTGAATGTGTGCTTCCTGTCCACGGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
CDS CCA 90 bp ACATTCAGCAGACTCGGGGAGACCTGCATGGCGGCCACTTGCTGGTaGAAGTGTGACGACATGGCCCGCTCGCTGAGGATGGCCACGGAG +
Preference number: 5 (lower is better)
Translates to: TFSRLGETCMAATCW*KCDDMARSLRMATE
Trigger: CTCCGTGGCCATCCTCAGCGAGCGGGCCATGTCGTCACACTTCCACCAGCAAGTGGCCGCCATGCAGGTCTCCCCGAGTCTGCTGAATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
CDS CCA 90 bp CACACATTCAGCAGACTCGGGGAGACCTGCATGGCGGCCACTTGCTaGTGGAAGTGTGACGACATGGCCCGCTCGCTGAGGATGGCCACG +
Preference number: 5 (lower is better)
Translates to: HTFSRLGETCMAATC*WKCDDMARSLRMAT
Trigger: CGTGGCCATCCTCAGCGAGCGGGCCATGTCGTCACACTTCCACCAGCAAGTGGCCGCCATGCAGGTCTCCCCGAGTCTGCTGAATGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
CDS CCA 90 bp CCGTGGACAGGAAGCACACATTCAGCAGACTCGGGGAGACCTGCATaGCGGCCACTTGCTGGTGGAAGTGTGACGACATGGCCCGCTCGC +
Preference number: 5 (lower is better)
Translates to: PWTGSTHSADSGRPA*RPLAGGSVTTWPAR
Trigger: GCGAGCGGGCCATGTCGTCACACTTCCACCAGCAAGTGGCCGCCATGCAGGTCTCCCCGAGTCTGCTGAATGTGTGCTTCCTGTCCACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
CDS-3UTR CAA 90 bp GGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGAGAAGTGGCCAGCCTaGTGGTACAGCATGACCGCC +
Preference number: 5 (lower is better)
Translates to: GPGRCVLAQLCRVFQHRHEKWPA*WYSMTA
Trigger: GGCGGTCATGCTGTACCACAAGGCTGGCCACTTCTC...ATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTTGGTCCAGGGGGCTCTaGGCCTTGGCCTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGWSRGL*ALALAR
Trigger: CCTGGCCAAGGCCAAGGCCAAGAGCCCCCTGGACCA...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp GGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACATGGAATTACAGGAGTGTaGGTGGCCGGTGGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: GPGRCVLAQLCRVFQHRHGITGV*VAGGQS
Trigger: GCTCTGCCCACCGGCCACCAACACTCCTGTAATTCC...ATGTCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp AGTGCACCGCCTGCCCGACCTCCTCCTGGCTCTCGTACTGGCGGGCGAGGTGGTCAGCTACAGTGTGCTTaGGCCTCTCTTCGGGAAAGA +
Preference number: 5 (lower is better)
Translates to: SAPPARPPPGSRTGGRGGQLQCA*ASLRER
Trigger: TCTTTCCCGAAGAGAGGCCAAAGCACACTGTAGCTG...ACCACCTCGCCCGCCAGTACGAGAGCCAGGAGGAGGTCGGGCAGGCGGTGCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CAA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGAGCGTCCCGGGTGGCCTaGTCGCAGTCCTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: RNESKNLVELPGTQRQVGASRVA*SQSSSP
Trigger: GGGGCTGGAGGACTGCGACAAGGCCACCCGGGACGC...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS TCA 90 bp GGCGCTTGCACTTCCTGTACAGCTGCTCGGCGTCCTCCTGAGGAATaGGGATGGGCAGGTGTCGTGCAGCCTCCACACACCCACGTCTCA +
Preference number: 5 (lower is better)
Translates to: GACTSCTAARRPPEE*GWAGVVQPPHTHVS
Trigger: TGAGACGTGGGTGTGTGGAGGCTGCACGACACCTGCCCATCCTCATTCCTCAGGAGGACGCCGAGCAGCTGTACAGGAAGTGCAAGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS TCA 90 bp AGGTCGTGGCGCTTGCACTTCCTGTACAGCTGCTCGGCGTCCTCCTaGGGAATGAGGATGGGCAGGTGTCGTGCAGCCTCCACACACCCA +
Preference number: 5 (lower is better)
Translates to: RSWRLHFLYSCSASS*GMRMGRCRAASTHP
Trigger: TGGGTGTGTGGAGGCTGCACGACACCTGCCCATCCTCATTCCTCAGGAGGACGCCGAGCAGCTGTACAGGAAGTGCAAGCGCCACGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS GCA 90 bp AAGCACACATTCAGCAGACTCGGGGAGACCTGCATGGCGGCCACTTaGTGGTGGAAGTGTGACGACATGGCCCGCTCGCTGAGGATGGCC +
Preference number: 5 (lower is better)
Translates to: KHTFSRLGETCMAAT*WWKCDDMARSLRMA
Trigger: GGCCATCCTCAGCGAGCGGGCCATGTCGTCACACTTCCACCAGCAAGTGGCCGCCATGCAGGTCTCCCCGAGTCTGCTGAATGTGTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
CDS-3UTR CAA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTTGTCTCGTTGGCTATTaGCGCAGCCTTCTGGACATT +
Preference number: 5 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSCLVGY*RSLLDI
Trigger: AATGTCCAGAAGGCTGCGCAAATAGCCAACGAGACA...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp TTTTATTCACGTAGAGCTCCAGGGACGGCAGGTCCTCCGACAGCATCCTGGGCATGGTCCAGGGGGCTCTaGGCCTTGGCCTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: FYSRRAPGTAGPPTASWAWSRGL*ALALAR
Trigger: CCTGGCCAAGGCCAAGGCCAAGAGCCCCCTGGACCA...TGCCCAGGATGCTGTCGGAGGACCTGCCGTCCCTGGAGCTCTACGTGAATAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CAA 90 bp TCCGCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAAAAGGAGGAGTTGTTaGACAGTCCCCTGCCAGGTT +
Preference number: 5 (lower is better)
Translates to: SAGPGRCVLAQLCRVFQHKRRSC*TVPCQV
Trigger: AACCTGGCAGGGGACTGTCAAACAACTCCTCCTTTT...GTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp AGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTATGGGGAGGATATGATGTGCAGCAGAGGCGTCCCTaGCACTCGGCCCCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: SCCSGAVGPAGVWGGYDVQQRRP*HSAPLV
Trigger: GACCAAAGGGGCCGAGTGCAAGGGACGCCTCTGCTG...CACATCATATCCTCCCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS-3UTR CAA 90 bp GTGTACGTCCTGCGGGCCTGGATGAACCTCTTCACCAGTGCCATCCTGCTCTGCAGGAGGTCGTGGCGCTaGCACTTCCTGTACAGCTGC +
Preference number: 5 (lower is better)
Translates to: VYVLRAWMNLFTSAILLCRRSWR*HFLYSC
Trigger: GCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCCT...GCAGAGCAGGATGGCACTGGTGAAGAGGTTCATCCAGGCCCGCAGGACGTACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CAA 90 bp GTAGAACTTGTTCAGGAGGTCGTGGCGCTTGCACTTCCTGTACAGCTGCTCGGCAGGGGGCTCTTGGCCTaGGCCTTGGCCAGGCACTTG +
Preference number: 5 (lower is better)
Translates to: VELVQEVVALALPVQLLGRGLLA*ALARHL
Trigger: CAAGTGCCTGGCCAAGGCCAAGGCCAAGAGCCCCCT...GCCGAGCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCCTGAACAAGTTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CAA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTTGCTCCTTGTCCTGCTaGTTAAACACCGTCACTTCT +
Preference number: 5 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSCSLSC*LNTVTS
Trigger: AGAAGTGACGGTGTTTAACAAGCAGGACAAGGAGCA...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp GCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGAATCGTGTGCTGCTCCTaGTCCTGCTTGTTAAACACC +
Preference number: 5 (lower is better)
Translates to: AGPGRCVLAQLCRVFQHRIVCCS*SCLLNT
Trigger: GGTGTTTAACAAGCAGGACAAGGAGCAGCACACGAT...TCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp AGTGCACCGCCTGCCCGACCTCCTCCTGGCTCTCGTACTGGCGGGCGAGGTGGTGAACTTGAACTCGGTTaGACTCCACCGTGTAAACGT +
Preference number: 5 (lower is better)
Translates to: SAPPARPPPGSRTGGRGGELELG*TPPCKR
Trigger: ACGTTTACACGGTGGAGTCAAACCGAGTTCAAGTTC...ACCACCTCGCCCGCCAGTACGAGAGCCAGGAGGAGGTCGGGCAGGCGGTGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CAA 90 bp GCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTGTTTTCCCGCTCAGCTaGACCTTCATCACTTCTTCT +
Preference number: 5 (lower is better)
Translates to: AKARVSQLLLRSRGPCRSVFPLS*TFITSS
Trigger: AGAAGAAGTGATGAAGGTCAAGCTGAGCGGGAAAAC...ACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS GCA 90 bp TTCCAGACTGCGACAGCATCCTTGGTGGCAAACACTCCACTGATGTaGATGTCGGTGCGCAGGCTGTGTGCGACCCCCGTGGACAGGAAG +
Preference number: 5 (lower is better)
Translates to: FQTATASLVANTPLM*MSVRRLCATPVDRK
Trigger: CTTCCTGTCCACGGGGGTCGCACACAGCCTGCGCACCGACATGCACATCAGTGGAGTGTTTGCCACCAAGGATGCTGTCGCAGTCTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
CDS GCA 90 bp CCCGACGGCCATCACGAGAAGGCTGCCTTCAATCAAAGCGATGTCTaGCCGGCGGCCGGTTTTCCCGCTCAGCTTGACCTTCATCACTTC +
Preference number: 5 (lower is better)
Translates to: PDGHHEKAAFNQSDV*PAAGFPAQLDLHHF
Trigger: GAAGTGATGAAGGTCAAGCTGAGCGGGAAAACCGGCCGCCGGGCAGACATCGCTTTGATTGAAGGCAGCCTTCTCGTGATGGCCGTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426508.7
ENST00000439987.6
CDS-3UTR CAA 90 bp GCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGACGTTTTCTTCATGCATaGCTAACACAGGCGTCTCAC +
Preference number: 5 (lower is better)
Translates to: AGPGRCVLAQLCRVFQHRRFLHA*LTQASH
Trigger: GTGAGACGCCTGTGTTAGCAATGCATGAAGAAAACG...TCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp GCCGGCCCGGGCCGCTGCGTTCTCGCCCAGCTCTGTCGCGTATTCCAACACAGAGAACTTGAACTCGGTTaGACTCCACCGTGTAAACGT +
Preference number: 5 (lower is better)
Translates to: AGPGRCVLAQLCRVFQHRELELG*TPPCKR
Trigger: ACGTTTACACGGTGGAGTCAAACCGAGTTCAAGTTC...TCTGTGTTGGAATACGCGACAGAGCTGGGCGAGAACGCAGCGGCCCGGGCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp CCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGACTCTCTCCGATCAATTaGTCCAGTCTTGAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: PPRPGCPSCCSGAVGPAGLSPIN*SSLEVK
Trigger: TTTGACTTCAAGACTGGACAAATTGATCGGAGAGAG...TCCTGCAGGGCCCACGGCTCCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS TCA 90 bp CTGCTGCATCCGGGGCTTCTATCTGGTGGTCATAATAGAGGGCCATaGCGGAACTCAGGCCTCCTCAGCGCTGAAACCGGAATCAGCCGC +
Preference number: 5 (lower is better)
Translates to: LLHPGLLSGGHNRGP*RNSGLLSAETGISR
Trigger: GCGGCTGATTCCGGTTTCAGCGCTGAGGAGGCCTGAGTTCCGTCATGGCCCTCTATTATGACCACCAGATAGAAGCCCCGGATGCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569646.5
CDS GCA 90 bp CCTGCACTCCGTATCGCGGCTCCAGAAAGCTCGAAGATCGCCACCTaGCTTCCGTTCCAGACTGCGACAGCATCCTTGGTGGCAAACACT +
Preference number: 5 (lower is better)
Translates to: PALRIAAPESSKIAT*LPFQTATASLVANT
Trigger: AGTGTTTGCCACCAAGGATGCTGTCGCAGTCTGGAACGGAAGGCAGGTGGCGATCTTCGAGCTTTCTGGAGCCGCGATACGGAGTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
ENST00000565298.5
CDS GCA 90 bp CATGGCCCGCTCGCTGAGGATGGCCACGGAGATGACGCTGTTCACTaGCAGCAGGTTCTTCCTGGAACCCCACTGGATTTGCGTGATGTT +
Preference number: 5 (lower is better)
Translates to: HGPLAEDGHGDDAVH*QQVLPGTPLDLRDV
Trigger: AACATCACGCAAATCCAGTGGGGTTCCAGGAAGAACCTGCTGGCAGTGAACAGCGTCATCTCCGTGGCCATCCTCAGCGAGCGGGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426508.7
ENST00000439987.6
CDS CCA 90 bp CCATACTCGTGTTTCAGCAGAGGCGTCCCTTGCACTCGGCCCCTTTaGTCCAACCTCCACAAGAGCAAGACACCAAGCCTGTCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: PYSCFSRGVPCTRPL*SNLHKSKTPSLSPD
Trigger: GTCTGGGGACAGGCTTGGTGTCTTGCTCTTGTGGAGGTTGGACCAAAGGGGCCGAGTGCAAGGGACGCCTCTGCTGAAACACGAGTATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426508.7
ENST00000439987.6
CDS CCA 90 bp CAGCCTCAGTTTGAGCCGTTAAGCCTTCGTTTCAGGAGCCTTGTGTaGCGGGATGCTGCTAGTGAGCAGCACTCAGGCCTCACCGTCTGG +
Preference number: 5 (lower is better)
Translates to: QPQFEPLSLRFRSLV*RDAASEQHSGLTVW
Trigger: CCAGACGGTGAGGCCTGAGTGCTGCTCACTAGCAGCATCCCGCCACACAAGGCTCCTGAAACGAAGGCTTAACGGCTCAAACTGAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568837.1
CDS-3UTR CAA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCGCGTCCTCCATGCTGTaGTGGCGGACCTGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: EPDSLQRNESKNLVELPGASSML*WRTCSG
Trigger: CCCCGAGCAGGTCCGCCACAACAGCATGGAGGACGC...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp CATCTCGCCCTGGCTCTCCAGGTACTGCGCCCACCACCGCCACAGGGTCTTATCATCGTGTGCTGCTCCTaGTCCTGCTTGTTAAACACC +
Preference number: 5 (lower is better)
Translates to: HLALALQVLRPPPPQGLIIVCCS*SCLLNT
Trigger: GGTGTTTAACAAGCAGGACAAGGAGCAGCACACGAT...GATAAGACCCTGTGGCGGTGGTGGGCGCAGTACCTGGAGAGCCAGGGCGAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CAA 90 bp GTGTACGTCCTGCGGGCCTGGATGAACCTCTTCACCAGTGCCATCCTGCTCTGCACTGCGACAGCATCCTaGGTGGCAAACACTCCACTG +
Preference number: 5 (lower is better)
Translates to: VYVLRAWMNLFTSAILLCTATAS*VANTPL
Trigger: CAGTGGAGTGTTTGCCACCAAGGATGCTGTCGCAGT...GCAGAGCAGGATGGCACTGGTGAAGAGGTTCATCCAGGCCCGCAGGACGTACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CAA 90 bp AGCCTAGCAGGGGGTGCAGCCGCCAAGGCCCGGGTGTCCCAGCTGTTGCTCAGGTCACTTTTGATGAGCTaGATGGATTTGAAGGCTTCG +
Preference number: 5 (lower is better)
Translates to: SLAGGAAAKARVSQLLLRSLLMS*MDLKAS
Trigger: CGAAGCCTTCAAATCCATCAAGCTCATCAAAAGTGA...CCTGAGCAACAGCTGGGACACCCGGGCCTTGGCGGCTGCACCCCCTGCTAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS GCA 90 bp CCCAGGAGCACGGTGATGTCGGCTGTGTGTGTCAGGGGCATCGTGTaGTGCTCCTTGTCCTGCTTGTTAAACACCGTCACTTCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: PRSTVMSAVCVRGIV*CSLSCLLNTVTSPV
Trigger: GACTGGAGAAGTGACGGTGTTTAACAAGCAGGACAAGGAGCAGCACACGATGCCCCTGACACACACAGCCGACATCACCGTGCTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS GCA 90 bp CGGAGCACGGTGATGTCGGCTGTGTGTGTCAGGGGCATCGTGTGCTaGTCCTTGTCCTGCTTGTTAAACACCGTCACTTCTCCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: RSTVMSAVCVRGIVC*SLSCLLNTVTSPVS
Trigger: GGAGACTGGAGAAGTGACGGTGTTTAACAAGCAGGACAAGGAGCAGCACACGATGCCCCTGACACACACAGCCGACATCACCGTGCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426508.7
ENST00000439987.6
ENST00000566052.1
ENST00000569646.5
ENST00000569812.1
CDS-3UTR CAA 90 bp GTAGAACTTGTTCAGGAGGTCGTGGCGCTTGCACTTCCTGTACAGCTGCTCGGCAGGTCCGAGGAGTCCTaGGCCACGGTCATCTTTTCC +
Preference number: 5 (lower is better)
Translates to: VELVQEVVALALPVQLLGRSEES*ATVIFS
Trigger: GGAAAAGATGACCGTGGCCAAGGACTCCTCGGACCT...GCCGAGCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCCTGAACAAGTTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CAA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTTGCTTGATGGACTCCTaGGGGTCCTCTGTGTACGTC +
Preference number: 5 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGCLMDS*GSSVYV
Trigger: GACGTACACAGAGGACCCCAAGGAGTCCATCAAGCA...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp CTCCTTGCACAGGCGGATGGCATTCTTGAAGGCCTGTGCCCGGGTGTAGAAGTGTGCTTGATGGACTCCTaGGGGTCCTCTGTGTACGTC +
Preference number: 5 (lower is better)
Translates to: LLAQADGILEGLCPGVEVCLMDS*GSSVYV
Trigger: GACGTACACAGAGGACCCCAAGGAGTCCATCAAGCA...CACTTCTACACCCGGGCACAGGCCTTCAAGAATGCCATCCGCCTGTGCAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CAA 90 bp AGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTATGGGGAGGATATGATGTGTGCTTGATGGACTCCTaGGGGTCCTCTGTGTACGTC +
Preference number: 5 (lower is better)
Translates to: SCCSGAVGPAGVWGGYDVCLMDS*GSSVYV
Trigger: GACGTACACAGAGGACCCCAAGGAGTCCATCAAGCA...CACATCATATCCTCCCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp TGGCCAAGGGAAGCCGCCGCCGCATCTCCTCCAGGAATCTGTAGGCCGTCTGGTCAGACGGCCTCACTTTaGATGAGCTTGATGGATTTG +
Preference number: 5 (lower is better)
Translates to: WPREAAAASPPGICRPSGQTASL*MSLMDL
Trigger: CAAATCCATCAAGCTCATCAAAAGTGAGGCCGTCTG...ACCAGACGGCCTACAGATTCCTGGAGGAGATGCGGCGGCGGCTTCCCTTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CAA 90 bp CAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGTTTGCGTGATGTTTCCTaGGAGCTCGGTAGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: QKSSGAAGHPEAGGTEQGLRDVS*ELGRGL
Trigger: CAGACCCCTACCGAGCTCCAAGGAAACATCACGCAA...ACCTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS TCA 90 bp CAACAGGCGAACCAAGAAGGCAAACAGGGAGAAAGGAAAGAGCCGTaGGCACGCGCTATCTCCCAACATCCCAGTGGTCGGGATCCTCAC +
Preference number: 5 (lower is better)
Translates to: QQANQEGKQGERKEP*ARAISQHPSGRDPH
Trigger: GTGAGGATCCCGACCACTGGGATGTTGGGAGATAGCGCGTGCTCACGGCTCTTTCCTTTCTCCCTGTTTGCCTTCTTGGTTCGCCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561954.1
CDS TCA 90 bp CTGCTGCATCCGGGGCTTCTATCTGGTGGTCATAATAGAGGGCCATaGCGGAACTCAGGCCTCCTCAGCGCTGAAACTTTCAGGCGTCCA +
Preference number: 5 (lower is better)
Translates to: LLHPGLLSGGHNRGP*RNSGLLSAETFRRP
Trigger: TGGACGCCTGAAAGTTTCAGCGCTGAGGAGGCCTGAGTTCCGTCATGGCCCTCTATTATGACCACCAGATAGAAGCCCCGGATGCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569812.1
CDS GCA 90 bp AGGAGCACGGTGATGTCGGCTGTGTGTGTCAGGGGCATCGTGTGCTaGTCCTTGTCCTGCTTGTTAAACACCGTCACTTCTCCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: RSTVMSAVCVRGIVC*SLSCLLNTVTSPVS
Trigger: GGAGACTGGAGAAGTGACGGTGTTTAACAAGCAGGACAAGGAGCAGCACACGATGCCCCTGACACACACAGCCGACATCACCGTGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS GCA 90 bp CAACGGAGCACGGTGATGTCGGCTGTGTGTGTCAGGGGCATCGTGTaGTGCTCCTTGTCCTGCTTGTTAAACACCGTCACTTCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: QRSTVMSAVCVRGIV*CSLSCLLNTVTSPV
Trigger: GACTGGAGAAGTGACGGTGTTTAACAAGCAGGACAAGGAGCAGCACACGATGCCCCTGACACACACAGCCGACATCACCGTGCTCCGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426508.7
ENST00000439987.6
ENST00000566052.1
ENST00000569646.5
ENST00000569812.1
CDS GCA 90 bp TGCGTGAGGTGTTTCCCATACTCGTGTTTCAGCAGAGGCGTCCCTTaGACTCGGCCCCTTTGGTCCAACCTCCACAAGAGCAAGACACCA +
Preference number: 5 (lower is better)
Translates to: CVRCFPYSCFSRGVP*TRPLWSNLHKSKTP
Trigger: TGGTGTCTTGCTCTTGTGGAGGTTGGACCAAAGGGGCCGAGTGCAAGGGACGCCTCTGCTGAAACACGAGTATGGGAAACACCTCACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426508.7
ENST00000439987.6
CDS GCA 90 bp CACCGTGTACAGGGACAGCCGGAGGTTCTCTGTGACCACCACCAGTaGCTCCCTCTTCTCCATGTAGAACAGCATCTGAATCGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: HRVQGQPEVLCDHHQ*LPLLHVEQHLNRAV
Trigger: GACAGCACGATTCAGATGCTGTTCTACATGGAGAAGAGGGAGGCACTGGTGGTGGTCACAGAGAACCTCCGGCTGTCCCTGTACACGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426508.7
ENST00000439987.6
CDS GCA 90 bp GAGGCTCCCAGCACCAGAGAGGCTGAGAGCTTCCCACGTGGCATCTaGAAGCTGGGCAGCATTTCATCGAGTGGGAAGACCATGAAATAC +
Preference number: 5 (lower is better)
Translates to: EAPSTREAESFPRGI*KLGSISSSGKTMKY
Trigger: GTATTTCATGGTCTTCCCACTCGATGAAATGCTGCCCAGCTTGCAGATGCCACGTGGGAAGCTCTCAGCCTCTCTGGTGCTGGGAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561954.1
CDS GCA 90 bp CACTCAGGAGCCCTGGAGCCTGGGAAACATCTGGGGACAATTCAGTaGTTTGCAAACAATGTCAGATGGAAGCGGCCAGGGGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: HSGALEPGKHLGTIQ*FANNVRWKRPGVGR
Trigger: TCTGCCCACCCCTGGCCGCTTCCATCTGACATTGTTTGCAAAGCACTGAATTGTCCCCAGATGTTTCCCAGGCTCCAGGGCTCCTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS GCA 90 bp CTGGAATGTGGCCGGGTGCGAACCCGCCCCTTCACTTTGACACACTaGTCAGCGATCTCTGCGGTGATGGGTTTTAAGGAGCTGATGACT +
Preference number: 5 (lower is better)
Translates to: LECGRVRTRPFTLTH*SAISAVMGFKELMT
Trigger: AGTCATCAGCTCCTTAAAACCCATCACCGCAGAGATCGCTGAGCAGTGTGTCAAAGTGAAGGGGCGGGTTCGCACCCGGCCACATTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS-3UTR CAA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGAGGTTTCCTGTCTCGTaGGCTATTTGCGCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKRFPVS*AICAAF
Trigger: GAAGGCTGCGCAAATAGCCAACGAGACAGGAAACCT...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCAGGCGGATGGCATTCTaGAAGGCCTGTGCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: EPDSLQRNESKNLVELPGRRMAF*KACARV
Trigger: CACCCGGGCACAGGCCTTCAAGAATGCCATCCGCCT...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp GGGTGGCCTTGTCGCAGTCCTCCAGCCCCACAAAGTCTCGCAGGGGTCTCCTGGCTCTCTCCGATCAATTaGTCCAGTCTTGAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: GWPCRSPPAPQSLAGVSWLSPIN*SSLEVK
Trigger: TTTGACTTCAAGACTGGACAAATTGATCGGAGAGAG...CCAGGAGACCCCTGCGAGACTTTGTGGGGCTGGAGGACTGCGACAAGGCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CAA 90 bp TCTCCTGGTCCAGGGGGCTCTTGGCCTTGGCCTTGGCCAGGCACTTGTAGGCCTATGAGCTTGATGGATTaGAAGGCTTCGTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: SPGPGGSWPWPWPGTCRPMSLMD*KASSMS
Trigger: AGACATGGACGAAGCCTTCAAATCCATCAAGCTCAT...AGGCCTACAAGTGCCTGGCCAAGGCCAAGGCCAAGAGCCCCCTGGACCAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS GCA 90 bp CCACCAGTGCCTCCCTCTTCTCCATGTAGAACAGCATCTGAATCGTaGTGTCTGCGGACACCACCTGAGTGGTCTTGCCCTTCTCATCCA +
Preference number: 5 (lower is better)
Translates to: PPVPPSSPCRTASES*CLRTPPEWSCPSHP
Trigger: TGGATGAGAAGGGCAAGACCACTCAGGTGGTGTCCGCAGACAGCACGATTCAGATGCTGTTCTACATGGAGAAGAGGGAGGCACTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426508.7
ENST00000439987.6
CDS-3UTR CAA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGAGACGGCCTCACCTTCTaGCCACCTAAGAATGACCTG +
Preference number: 5 (lower is better)
Translates to: RNESKNLVELPGTQRQVGDGLTF*PPKNDL
Trigger: CAGGTCATTCTTAGGTGGCAAGAAGGTGAGGCCGTC...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361339.9
CDS-3UTR CAA 90 bp CAGGGGTCTCCTGGACACCATCTGAGGGATGTGGTGGCACCCAGGCTCCACCTCTCACTTTTGATGAGCTaGATGGATTTGAAGGCTTCG +
Preference number: 5 (lower is better)
Translates to: QGSPGHHLRDVVAPRLHLSLLMS*MDLKAS
Trigger: CGAAGCCTTCAAATCCATCAAGCTCATCAAAAGTGA...GAGGTGGAGCCTGGGTGCCACCACATCCCTCAGATGGTGTCCAGGAGACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS GCA 90 bp CATCAGCGACTAACTAGACGGGAACAAGCTGCGCCAACCAAGGGTTaGTCACGGCCCACCTCTCCTTCTCTGGTTTCAGGCTCTTTTGAT +
Preference number: 5 (lower is better)
Translates to: HQRLTRREQAAPTKG*SRPTSPSLVSGSFD
Trigger: ATCAAAAGAGCCTGAAACCAGAGAAGGAGAGGTGGGCCGTGAGCAACCCTTGGTTGGCGCAGCTTGTTCCCGTCTAGTTAGTCGCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439987.6
CDS-3UTR CAA 90 bp TTTTATTCACGTAGAGCTCCAGGGACGGCAGGTCCTCCGACAGCATCCTGGGCATGTCTCGTTGGCTATTaGCGCAGCCTTCTGGACATT +
Preference number: 5 (lower is better)
Translates to: FYSRRAPGTAGPPTASWACLVGY*RSLLDI
Trigger: AATGTCCAGAAGGCTGCGCAAATAGCCAACGAGACA...TGCCCAGGATGCTGTCGGAGGACCTGCCGTCCCTGGAGCTCTACGTGAATAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CAA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCAGGTCCGAGGAGTCCTaGGCCACGGTCATCTTTTCC +
Preference number: 5 (lower is better)
Translates to: EPDSLQRNESKNLVELPGRSEES*ATVIFS
Trigger: GGAAAAGATGACCGTGGCCAAGGACTCCTCGGACCT...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp AGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTATGGGGAGGATATGATGTGTGCTCCTTGTCCTGCTaGTTAAACACCGTCACTTCT +
Preference number: 5 (lower is better)
Translates to: SCCSGAVGPAGVWGGYDVCSLSC*LNTVTS
Trigger: AGAAGTGACGGTGTTTAACAAGCAGGACAAGGAGCA...CACATCATATCCTCCCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp AGCTGTTGCTCAGGAGCCGTGGGCCCTGCAGGAGTATGGGGAGGATATGATGTGCGTTTTCTTCATGCATaGCTAACACAGGCGTCTCAC +
Preference number: 5 (lower is better)
Translates to: SCCSGAVGPAGVWGGYDVRFLHA*LTQASH
Trigger: GTGAGACGCCTGTGTTAGCAATGCATGAAGAAAACG...CACATCATATCCTCCCCATACTCCTGCAGGGCCCACGGCTCCTGAGCAACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGCAGACGGCCTCACTTTaGATGAGCTTGATGGATTTG +
Preference number: 5 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKQTASL*MSLMDL
Trigger: CAAATCCATCAAGCTCATCAAAAGTGAGGCCGTCTG...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp GTCAAAGACGGTCACTGTGTCCATTTCAACATCGTAGAAGCAGATTTTGGAATCTGCTCGGCGTCCTCCTaGGCCACGTCCAGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: VKDGHCVHFNIVEADFGICSASS*ATSSRW
Trigger: CCAGCGGCTGGACGTGGCCAAGGAGGACGCCGAGCA...GATTCCAAAATCTGCTTCTACGATGTTGAAATGGACACAGTGACCGTCTTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS TCA 90 bp TGGCACGCACTCCCCTTGCTCCAGGTAAATATCCACGCTGCCTGTTaGGGTTGTGCTGATGTAAGCAACTGCCAAGAATGGATGGACAGG +
Preference number: 5 (lower is better)
Translates to: WHALPLLQVNIHAAC*GCADVSNCQEWMDR
Trigger: CCTGTCCATCCATTCTTGGCAGTTGCTTACATCAGCACAACCTCAACAGGCAGCGTGGATATTTACCTGGAGCAAGGGGAGTGCGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
ENST00000566052.1
ENST00000569646.5
ENST00000569812.1
CDS GCA 90 bp TGCCTCCCTCTTCTCCATGTAGAACAGCATCTGAATCGTGCTGTCTaGGGACACCACCTGAGTGGTCTTGCCCTTCTCATCCACATAGTG +
Preference number: 5 (lower is better)
Translates to: CLPLLHVEQHLNRAV*GHHLSGLALLIHIV
Trigger: CACTATGTGGATGAGAAGGGCAAGACCACTCAGGTGGTGTCCGCAGACAGCACGATTCAGATGCTGTTCTACATGGAGAAGAGGGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426508.7
ENST00000439987.6
CDS CCA 90 bp TGTAGAACAGCATCTGAATCGTGCTGTCTGCGGACACCACCTGAGTaGTCTTGCCCTTCTCATCCACATAGTGCACTGTCCCGTCCATCA +
Preference number: 5 (lower is better)
Translates to: CRTASESCCLRTPPE*SCPSHPHSALSRPS
Trigger: TGATGGACGGGACAGTGCACTATGTGGATGAGAAGGGCAAGACCACTCAGGTGGTGTCCGCAGACAGCACGATTCAGATGCTGTTCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426508.7
ENST00000439987.6
CDS-3UTR CAA 90 bp TCTCCTGGACACCATCTGAGGGATGTGGTGGCACCCAGGCTCCACCTCGTCTTCGCTCTTATTAGTCTCTaGCTCATTAAAGGACAGCGT +
Preference number: 5 (lower is better)
Translates to: SPGHHLRDVVAPRLHLVFALISL*LIKGQR
Trigger: ACGCTGTCCTTTAATGAGCAAGAGACTAATAAGAGC...GAAGACGAGGTGGAGCCTGGGTGCCACCACATCCCTCAGATGGTGTCCAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS CCA 90 bp AGAAAGGAAAGAGCCGTGAGCACGCGCTATCTCCCAACATCCCAGTaGTCGGGATCCTCACCTTTTGATGAGCTTGATGGATTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: RKERAVSTRYLPTSQ*SGSSPFDELDGFEG
Trigger: GCCTTCAAATCCATCAAGCTCATCAAAAGGTGAGGATCCCGACCACTGGGATGTTGGGAGATAGCGCGTGCTCACGGCTCTTTCCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561954.1
CDS CCA 90 bp GAGCTTCCCACGTGGCATCTGCAAGCTGGGCAGCATTTCATCGAGTaGGAAGACCATGAAATACACCATGACGCAGTCATGAGGAGTCAA +
Preference number: 5 (lower is better)
Translates to: ELPTWHLQAGQHFIE*EDHEIHHDAVMRSQ
Trigger: TTGACTCCTCATGACTGCGTCATGGTGTATTTCATGGTCTTCCCACTCGATGAAATGCTGCCCAGCTTGCAGATGCCACGTGGGAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561954.1
CDS-3UTR CAA 90 bp TTACAATGTGTAGTTGGGAGAATACGATGGAAGGGTGAACCCGACTCCCTTCAATCCAGGCCGTTCTCCTaGCACAGGCGGATGGCATTC +
Preference number: 5 (lower is better)
Translates to: LQCVVGRIRWKGEPDSLQSRPFS*HRRMAF
Trigger: GAATGCCATCCGCCTGTGCAAGGAGAACGGCCTGGA...TTGAAGGGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAACTACACATTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGGAGAAGTGGCCAGCCTaGTGGTACAGCATGACCGCC +
Preference number: 5 (lower is better)
Translates to: WKGEPDSLQRNESKNLVEEKWPA*WYSMTA
Trigger: GGCGGTCATGCTGTACCACAAGGCTGGCCACTTCTC...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTCATGGCCTTCAGCTaGTTGCCGGCCTGCGTGTAC +
Preference number: 5 (lower is better)
Translates to: WKGEPDSLQRNESKNLVELMAFS*LPACVY
Trigger: GTACACGCAGGCCGGCAACAAGCTGAAGGCCATGAG...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp TTACAATGTGTAGTTGGGAGAATACGATGGAAGGGTGAACCCGACTCCCTTCAACTCATGGCCTTCAGCTaGTTGCCGGCCTGCGTGTAC +
Preference number: 5 (lower is better)
Translates to: LQCVVGRIRWKGEPDSLQLMAFS*LPACVY
Trigger: GTACACGCAGGCCGGCAACAAGCTGAAGGCCATGAG...TTGAAGGGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAACTACACATTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp TTACAATGTGTAGTTGGGAGAATACGATGGAAGGGTGAACCCGACTCCCTTCAAGGAATTACAGGAGTGTaGGTGGCCGGTGGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: LQCVVGRIRWKGEPDSLQGITGV*VAGGQS
Trigger: GCTCTGCCCACCGGCCACCAACACTCCTGTAATTCC...TTGAAGGGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAACTACACATTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp GAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCCGAGAAAAGGAGGAGTaGTTTGACAGTCCCCTGCCA +
Preference number: 5 (lower is better)
Translates to: EPDSLQRNESKNLVELPGREKEE*FDSPLP
Trigger: TGGCAGGGGACTGTCAAACAACTCCTCCTTTTCTCG...GCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp TCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGACAGAGCAAGGCTCTTATTAGTCTCTaGCTCATTAAAGGACAGCGT +
Preference number: 5 (lower is better)
Translates to: SKNLVELPGTQRQVGQSKALISL*LIKGQR
Trigger: ACGCTGTCCTTTAATGAGCAAGAGACTAATAAGAGC...CTTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGAGGTCCGAGGAGTCCTaGGCCACGGTCATCTTTTCC +
Preference number: 5 (lower is better)
Translates to: WKGEPDSLQRNESKNLVERSEES*ATVIFS
Trigger: GGAAAAGATGACCGTGGCCAAGGACTCCTCGGACCT...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGATGGCCTTCAGCTTGTaGCCGGCCTGCGTGTACTTC +
Preference number: 5 (lower is better)
Translates to: WKGEPDSLQRNESKNLVEMAFSL*PACVYF
Trigger: GAAGTACACGCAGGCCGGCAACAAGCTGAAGGCCAT...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGAATGAGCTTGATGGATTaGAAGGCTTCGTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: RNESKNLVELPGTQRQVGMSLMD*KASSMS
Trigger: AGACATGGACGAAGCCTTCAAATCCATCAAGCTCAT...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS TCA 90 bp TTTGATCTTTCATACTCTCGAGCATGGTCAGAAAGGGTCAAGGTCTaGAAACAGCGTCTTGCGCGTGTTGACTCACCCTGTCCCCAGACA +
Preference number: 5 (lower is better)
Translates to: FDLSYSRAWSERVKV*KQRLARVDSPCPQT
Trigger: TGTCTGGGGACAGGGTGAGTCAACACGCGCAAGACGCTGTTTTCAGACCTTGACCCTTTCTGACCATGCTCGAGAGTATGAAAGATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566052.1
CDS-3UTR CAA 90 bp GTCAAAGACGGTCACTGTGTCCATTTCAACATCGTAGAAGCAGATTTTGGAATCTCCAGGCCGTTCTCCTaGCACAGGCGGATGGCATTC +
Preference number: 5 (lower is better)
Translates to: VKDGHCVHFNIVEADFGISRPFS*HRRMAF
Trigger: GAATGCCATCCGCCTGTGCAAGGAGAACGGCCTGGA...GATTCCAAAATCTGCTTCTACGATGTTGAAATGGACACAGTGACCGTCTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CAA 90 bp AGGAATGAATCCAAAAATCTAGTGGAGCTGCCGGGCACCCAGAGGCAGGTGGGATCAATTTGTCCAGTCTaGAAGTCAAAGACGGTCACT +
Preference number: 5 (lower is better)
Translates to: RNESKNLVELPGTQRQVGSICPV*KSKTVT
Trigger: AGTGACCGTCTTTGACTTCAAGACTGGACAAATTGA...TCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTTGGATTCATTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS GCA 90 bp TCTACAAGGATTTTCCGATGCTCTGGGTTCTATTTCACAGAGCACTaGAAGAAATACCTGACACGGGAGATGCTTCTGGAAGCGAGAGCC +
Preference number: 5 (lower is better)
Translates to: STRIFRCSGFYFTEH*KKYLTREMLLEARA
Trigger: GGCTCTCGCTTCCAGAAGCATCTCCCGTGTCAGGTATTTCTTGCAGTGCTCTGTGAAATAGAACCCAGAGCATCGGAAAATCCTTGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS-3UTR CAA 90 bp TTACAATGTGTAGTTGGGAGAATACGATGGAAGGGTGAACCCGACTCCCTTCAAAGGTTTCCTGTCTCGTaGGCTATTTGCGCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: LQCVVGRIRWKGEPDSLQRFPVS*AICAAF
Trigger: GAAGGCTGCGCAAATAGCCAACGAGACAGGAAACCT...TTGAAGGGAGTCGGGTTCACCCTTCCATCGTATTCTCCCAACTACACATTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000397417.6
ENST00000426508.7
CDS-3UTR CAA 90 bp GTCAAAGACGGTCACTGTGTCCATTTCAACATCGTAGAAGCAGATTTTGGAATCAGCAGCTCACACTGCTaGATGGACTCCTTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: VKDGHCVHFNIVEADFGISSSHC*MDSLGS
Trigger: GGACCCCAAGGAGTCCATCAAGCAGTGTGAGCTGCT...GATTCCAAAATCTGCTTCTACGATGTTGAAATGGACACAGTGACCGTCTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CAA 90 bp ACTCTGGTCCCAGAAGTGGTTCACGGGAACATAATTTTTCAGTCCCTCATCCACAAAAGGAGGAGTTGTTaGACAGTCCCCTGCCAGGTT +
Preference number: 5 (lower is better)
Translates to: TLVPEVVHGNIIFQSLIHKRRSC*TVPCQV
Trigger: AACCTGGCAGGGGACTGTCAAACAACTCCTCCTTTT...GTGGATGAGGGACTGAAAAATTATGTTCCCGTGAACCACTTCTGGGACCAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS-3UTR CAA 90 bp GTCAAAGACGGTCACTGTGTCCATTTCAACATCGTAGAAGCAGATTTTGGAATCCGAGAAAAGGAGGAGTaGTTTGACAGTCCCCTGCCA +
Preference number: 5 (lower is better)
Translates to: VKDGHCVHFNIVEADFGIREKEE*FDSPLP
Trigger: TGGCAGGGGACTGTCAAACAACTCCTCCTTTTCTCG...GATTCCAAAATCTGCTTCTACGATGTTGAAATGGACACAGTGACCGTCTTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397417.6
CDS CCA 90 bp TCAGCGATCTCTGCGGTGATGGGTTTTAAGGAGCTGATGACTTACTaGGTTTGTCTACAAGGATTTTCCGATGCTCTGGGTTCTATTTCA +
Preference number: 5 (lower is better)
Translates to: SAISAVMGFKELMTY*VCLQGFSDALGSIS
Trigger: TGAAATAGAACCCAGAGCATCGGAAAATCCTTGTAGACAAACCCAGTAAGTCATCAGCTCCTTAAAACCCATCACCGCAGAGATCGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS TCA 90 bp ATTTCATCGAGTGGGAAGACCATGAAATACACCATGACGCAGTCATaGGGAGTCAAATATTTCAACAGGCGAACCAAGAAGGCAAACAGG +
Preference number: 5 (lower is better)
Translates to: ISSSGKTMKYTMTQS*GVKYFNRRTKKANR
Trigger: CCTGTTTGCCTTCTTGGTTCGCCTGTTGAAATATTTGACTCCTCATGACTGCGTCATGGTGTATTTCATGGTCTTCCCACTCGATGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561954.1
CDS-3UTR CAA 90 bp TGGAAGGGTGAACCCGACTCCCTTCAAAGGAATGAATCCAAAAATCTAGTGGAGTCAATTTGTCCAGTCTaGAAGTCAAAGACGGTCACT +
Preference number: 5 (lower is better)
Translates to: WKGEPDSLQRNESKNLVESICPV*KSKTVT
Trigger: AGTGACCGTCTTTGACTTCAAGACTGGACAAATTGA...CTCCACTAGATTTTTGGATTCATTCCTTTGAAGGGAGTCGGGTTCACCCTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397417.6
ENST00000426508.7
CDS CCA 90 bp TTGATTGATACCCTCTTTCAGAGCATTTTTAATTGTGTTTCCACCTaGCTGTTTTTAGTGTTTACTTGTCCAAACTTCTGTTTAGGAGCA +
Preference number: 5 (lower is better)
Translates to: LIDTLFQSIFNCVST*LFLVFTCPNFCLGA
Trigger: TGCTCCTAAACAGAAGTTTGGACAAGTAAACACTAAAAACAGCCAGGTGGAAACACAATTAAAAATGCTCTGAAAGAGGGTATCAATCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561954.1
CDS GCA 72 bp TCCCACCCACCCCATGGCGGGCGCCCCTCACCAGCATaGCCAGCTGCGTGGCCAGCACGGCCACGCGGGCCT +
Preference number: 6 (lower is better)
Translates to: SHPPHGGRPSPA*PAAWPARPRGP
Trigger: AGGCCCGCGTGGCCGTGCTGGCCACGCAGCTGGGCATGCTGGTGAGGGGCGCCCGCCATGGGGTGGGTGGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS TCA 72 bp CAGGCCTCCTCAGCGCTGAAACCTCTGCCAGGCCGCTaGGCCGCCGCGCGTTGCCGGGACAACGGCGCGCCA +
Preference number: 6 (lower is better)
Translates to: QASSALKPLPGR*AAARCRDNGAP
Trigger: TGGCGCGCCGTTGTCCCGGCAACGCGCGGCGGCTCAGCGGCCTGGCAGAGGTTTCAGCGCTGAGGAGGCCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS GCA 72 bp CGGCCGGAAAGAGCCGAAGGCGATCGGGCACGCACGTaGAGCTCCGAGGCCCGAGCGTCGGGGGCCAGGTTA +
Preference number: 6 (lower is better)
Translates to: RPERAEGDRART*SSEARASGARL
Trigger: TAACCTGGCCCCCGACGCTCGGGCCTCGGAGCTGCACGTGCGTGCCCGATCGCCTTCGGCTCTTTCCGGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS CCA 72 bp ACAGCTGCTCGGCGTCCTCCAGCATGCCCAGCTGCGTaGCCAGCACGGCCACGCGGGCCTCTAGCTCCGGCT +
Preference number: 6 (lower is better)
Translates to: TAARRPPACPAA*PARPRGPLAPA
Trigger: AGCCGGAGCTAGAGGCCCGCGTGGCCGTGCTGGCCACGCAGCTGGGCATGCTGGAGGACGCCGAGCAGCTGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361339.9
ENST00000426508.7
CDS TCA 72 bp ACAACGGCGCGCCAGGAACGCGGAAATAGCCGAAGGTaGGCGAGGCGGCCCCGAGGACTCCCGAAGCGCCCC +
Preference number: 6 (lower is better)
Translates to: TTARQERGNSRR*ARRPRGLPKRP
Trigger: GGGGCGCTTCGGGAGTCCTCGGGGCCGCCTCGCTCACCTTCGGCTATTTCCGCGTTCCTGGCGCGCCGTTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS GCA 72 bp GTCTCCCAGCCCACAGCCAGCACCAGCCGCGTCGGGTaGCAGCACAGGGAAGCAACCCGGAACGGCCTCTCG +
Preference number: 6 (lower is better)
Translates to: VSQPTASTSRVG*QHREATRNGLS
Trigger: CGAGAGGCCGTTCCGGGTTGCTTCCCTGTGCTGGCACCCGACGCGGCTGGTGCTGGCTGTGGGCTGGGAGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
ENST00000566052.1
ENST00000569646.5
ENST00000569812.1
CDS CAA 90 bp CTCCTCAGCGCTGAAACCTCTGCCAGGCCGCTGAGCCGCCGCGCGTaGCCGGGACAACGGCGCGCCAGGAACGCGGAAATAGCCGAAGGT +
Preference number: 6 (lower is better)
Translates to: LLSAETSARPLSRRA*PGQRRARNAEIAEG
Trigger: ACCTTCGGCTATTTCCGCGTTCCTGGCGCGCCGTTGTCCCGGCAACGCGCGGCGGCTCAGCGGCCTGGCAGAGGTTTCAGCGCTGAGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426508.7
CDS TCA 72 bp CCACAGCCTCCCCAGAAGTCCCGTGCTCAGCCCTGCTaGCCTGGGGGTCTCTCGGGCGCTCTGTTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: PQPPQKSRAQPC*PGGLSGALFQA
Trigger: GGCCTGGAACAGAGCGCCCGAGAGACCCCCAGGTCAGCAGGGCTGAGCACGGGACTTCTGGGGAGGCTGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS GCA 72 bp CCCATCGGCTCCGCCCCTGGGCAAGACTGCAGGCCATaGAGAGAGGTGCCCGTCACGAGTCCCACGGCCTTC +
Preference number: 6 (lower is better)
Translates to: PIGSAPGQDCRP*REVPVTSPTAF
Trigger: GAAGGCCGTGGGACTCGTGACGGGCACCTCTCTGCATGGCCTGCAGTCTTGCCCAGGGGCGGAGCCGATGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566818.1
CDS CCA 72 bp CTGTTCCAGGCCCACACACCTGACAGGCACACACCCTaGAGAGCCGGCGGTCGCCTAGCCTCCACCCACCTC +
Preference number: 6 (lower is better)
Translates to: LFQAHTPDRHTP*RAGGRLASTHL
Trigger: GAGGTGGGTGGAGGCTAGGCGACCGCCGGCTCTCCAGGGTGTGTGCCTGTCAGGTGTGTGGGCCTGGAACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS CCA 72 bp GACCTCGAGAAGCGCCGGCTCCCCACCCCGGGCCCGTaGTACCTTGCACAGGCGGATGGCATTCTTGAAGGC +
Preference number: 6 (lower is better)
Translates to: DLEKRRLPTPGP*YLAQADGILEG
Trigger: GCCTTCAAGAATGCCATCCGCCTGTGCAAGGTACCACGGGCCCGGGGTGGGGAGCCGGCGCTTCTCGAGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS TCA 72 bp ACCGGTCACCGCACCTTCCCACACCGCCAAGCACACTaGCACACGGGGCCGCTGTGGGCACAGCAAACGCCA +
Preference number: 6 (lower is better)
Translates to: TGHRTFPHRQAH*HTGPLWAQQTP
Trigger: TGGCGTTTGCTGTGCCCACAGCGGCCCCGTGTGTCAGTGTGCTTGGCGGTGTGGGAAGGTGCGGTGACCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS GCA 72 bp CTCCACCGCCGCTGTCTGCCCAGCTCTCCTGGGTCATaGCTCTCGGCTCTGCCCACATCAGTGCAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: LHRRCLPSSPGS*LSALPTSVQAQ
Trigger: CTGAGCCTGCACTGATGTGGGCAGAGCCGAGAGGCATGACCCAGGAGAGCTGGGCAGACAGCGGCGGTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS GCA 72 bp CCTTGGCCACGTCCAGCCGCTGGGTCTTCACGCACATaGGCGCCATGTTCTCCCAGACGGCCTCACTGTGGG +
Preference number: 6 (lower is better)
Translates to: PWPRPAAGSSRT*APCSPRRPHCG
Trigger: CCCACAGTGAGGCCGTCTGGGAGAACATGGCGCGCATGTGCGTGAAGACCCAGCGGCTGGACGTGGCCAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566818.1
CDS TCA 72 bp GGAGACCTGCATGGCGGCCACTTGCTGGTGGAAGTGTaGCGACATGGCCCGCTCGCTGAGGATGGCCACGGA +
Preference number: 6 (lower is better)
Translates to: GDLHGGHLLVEV*RHGPLAEDGHG
Trigger: TCCGTGGCCATCCTCAGCGAGCGGGCCATGTCGTCACACTTCCACCAGCAAGTGGCCGCCATGCAGGTCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
CDS GCA 72 bp TTCAGGAGGTCGTGGCGCTTGCACTTCCTGTACAGCTaGTCGGCGTCCTCCAGCATGCCCAGCTGCGTGGCC +
Preference number: 6 (lower is better)
Translates to: FRRSWRLHFLYS*SASSSMPSCVA
Trigger: GGCCACGCAGCTGGGCATGCTGGAGGACGCCGAGCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCCTGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361339.9
ENST00000426508.7
CDS CCA 72 bp AGCAGACTCGGGGAGACCTGCATGGCGGCCACTTGCTaGTGGAAGTGTGACGACATGGCCCGCTCGCTGAGG +
Preference number: 6 (lower is better)
Translates to: SRLGETCMAATC*WKCDDMARSLR
Trigger: CCTCAGCGAGCGGGCCATGTCGTCACACTTCCACCAGCAAGTGGCCGCCATGCAGGTCTCCCCGAGTCTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
CDS TCA 72 bp GGGCCCGTGGTACCTTGCACAGGCGGATGGCATTCTTaGAGGCCTGTGCCCGGGTGTAGAAGTGCACCGCCT +
Preference number: 6 (lower is better)
Translates to: GPVVPCTGGWHS*RPVPGCRSAPP
Trigger: AGGCGGTGCACTTCTACACCCGGGCACAGGCCTTCAAGAATGCCATCCGCCTGTGCAAGGTACCACGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS GCA 72 bp CCTTGGCCACGTCCAGCCGCTGGGTCTTCACGCACATaGGCGCCATGTTCTCCCAGACGGCCTCACCTTCTT +
Preference number: 6 (lower is better)
Translates to: PWPRPAAGSSRT*APCSPRRPHLL
Trigger: AAGAAGGTGAGGCCGTCTGGGAGAACATGGCGCGCATGTGCGTGAAGACCCAGCGGCTGGACGTGGCCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361339.9
CDS GCA 72 bp TTCAGCAGACTCGGGGAGACCTGCATGGCGGCCACTTaGTGGTGGAAGTGTGACGACATGGCCCGCTCGCTG +
Preference number: 6 (lower is better)
Translates to: FSRLGETCMAAT*WWKCDDMARSL
Trigger: CAGCGAGCGGGCCATGTCGTCACACTTCCACCAGCAAGTGGCCGCCATGCAGGTCTCCCCGAGTCTGCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
CDS CCA 72 bp ATGTTCCCCAGGCACACCTTGGCCACGTCCAGCCGCTaGGTCTTCACGCACATGCGCGCCATGTTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: MFPRHTLATSSR*VFTHMRAMFSQ
Trigger: CTGGGAGAACATGGCGCGCATGTGCGTGAAGACCCAGCGGCTGGACGTGGCCAAGGTGTGCCTGGGGAACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361339.9
ENST00000426508.7
ENST00000565298.5
CDS CCA 72 bp AGACTCGGGGAGACCTGCATGGCGGCCACTTGCTGGTaGAAGTGTGACGACATGGCCCGCTCGCTGAGGATG +
Preference number: 6 (lower is better)
Translates to: RLGETCMAATCW*KCDDMARSLRM
Trigger: CATCCTCAGCGAGCGGGCCATGTCGTCACACTTCCACCAGCAAGTGGCCGCCATGCAGGTCTCCCCGAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
CDS TCA 72 bp GCAGGCAGTTTCCACTGGGGCTCCAACGGAGCACGGTaGTGTCGGCTGTGTGTGTCAGGGGCATCGTGTGCT +
Preference number: 6 (lower is better)
Translates to: AGSFHWGSNGAR*CRLCVSGASCA
Trigger: AGCACACGATGCCCCTGACACACACAGCCGACATCACCGTGCTCCGTTGGAGCCCCAGTGGAAACTGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426508.7
ENST00000439987.6
ENST00000566052.1
ENST00000569646.5
CDS GCA 72 bp GCGACAGCATCCTTGGTGGCAAACACTCCACTGATGTaGATGTCGGTGCGCAGGCTGTGTGCGACCCCCGTG +
Preference number: 6 (lower is better)
Translates to: ATASLVANTPLM*MSVRRLCATPV
Trigger: CACGGGGGTCGCACACAGCCTGCGCACCGACATGCACATCAGTGGAGTGTTTGCCACCAAGGATGCTGTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
CDS GCA 72 bp TACCTTGCACAGGCGGATGGCATTCTTGAAGGCCTGTaGCCGGGTGTAGAAGTGCACCGCCTGCCCGACCTC +
Preference number: 6 (lower is better)
Translates to: YLAQADGILEGL*PGVEVHRLPDL
Trigger: GAGGTCGGGCAGGCGGTGCACTTCTACACCCGGGCACAGGCCTTCAAGAATGCCATCCGCCTGTGCAAGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS CCA 72 bp TGTGCATGTCGGTGCGCAGGCTGTGTGCGACCCCCGTaGACAGGAAGCACACATTCAGCAGACTCGGGGAGA +
Preference number: 6 (lower is better)
Translates to: CACRCAGCVRPP*TGSTHSADSGR
Trigger: TCTCCCCGAGTCTGCTGAATGTGTGCTTCCTGTCCACGGGGGTCGCACACAGCCTGCGCACCGACATGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
CDS TCA 72 bp ACTTCCTGTACAGCTGCTCGGCGTCCTCCTGAGGAATaGGGATGGGCAGGTGTCGTGCAGCCTCCACACACC +
Preference number: 6 (lower is better)
Translates to: TSCTAARRPPEE*GWAGVVQPPHT
Trigger: GGTGTGTGGAGGCTGCACGACACCTGCCCATCCTCATTCCTCAGGAGGACGCCGAGCAGCTGTACAGGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS TCA 72 bp AGACTGCGACAGCATCCTTGGTGGCAAACACTCCACTaGTGTGCATGTCGGTGCGCAGGCTGTGTGCGACCC +
Preference number: 6 (lower is better)
Translates to: RLRQHPWWQTLH*CACRCAGCVRP
Trigger: GGGTCGCACACAGCCTGCGCACCGACATGCACATCAGTGGAGTGTTTGCCACCAAGGATGCTGTCGCAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
CDS GCA 72 bp GACAGGAAGCACACATTCAGCAGACTCGGGGAGACCTaGATGGCGGCCACTTGCTGGTGGAAGTGTGACGAC +
Preference number: 6 (lower is better)
Translates to: DRKHTFSRLGET*MAATCWWKCDD
Trigger: GTCGTCACACTTCCACCAGCAAGTGGCCGCCATGCAGGTCTCCCCGAGTCTGCTGAATGTGTGCTTCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
CDS GCA 72 bp CGTATCGCGGCTCCAGAAAGCTCGAAGATCGCCACCTaGCTTCCGTTCCAGACTGCGACAGCATCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: RIAAPESSKIAT*LPFQTATASLV
Trigger: CACCAAGGATGCTGTCGCAGTCTGGAACGGAAGGCAGGTGGCGATCTTCGAGCTTTCTGGAGCCGCGATACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
ENST00000565298.5
CDS GCA 72 bp CAGCCTGGTAGAACTTGTTCAGGAGGTCGTGGCGCTTaGACTTCCTGTACAGCTGCTCGGCGTCCTCCTGAG +
Preference number: 6 (lower is better)
Translates to: QPGRTCSGGRGA*TSCTAARRPPE
Trigger: CTCAGGAGGACGCCGAGCAGCTGTACAGGAAGTGCAAGCGCCACGACCTCCTGAACAAGTTCTACCAGGCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS GCA 72 bp GGCCGGGTGCGAACCCGCCCCTTCACTTTGACACACTaGTCAGCGATCTCTGCGGTGATGGGTTTTAAGGAG +
Preference number: 6 (lower is better)
Translates to: GRVRTRPFTLTH*SAISAVMGFKE
Trigger: CTCCTTAAAACCCATCACCGCAGAGATCGCTGAGCAGTGTGTCAAAGTGAAGGGGCGGGTTCGCACCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS CCA 72 bp GGAAGCACACATTCAGCAGACTCGGGGAGACCTGCATaGCGGCCACTTGCTGGTGGAAGTGTGACGACATGG +
Preference number: 6 (lower is better)
Translates to: GSTHSADSGRPA*RPLAGGSVTTW
Trigger: CCATGTCGTCACACTTCCACCAGCAAGTGGCCGCCATGCAGGTCTCCCCGAGTCTGCTGAATGTGTGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
CDS CAA 90 bp CCCATACTCGTGTTTCAGCAGAGGCGTCCCTTGCACTCGGCCCCTTaGGTCCAACCTCCACAAGAGCAAGACACCAAGCCTGTCCCCAGA +
Preference number: 6 (lower is better)
Translates to: PILVFQQRRPLHSAP*VQPPQEQDTKPVPR
Trigger: TCTGGGGACAGGCTTGGTGTCTTGCTCTTGTGGAGGTTGGACCAAAGGGGCCGAGTGCAAGGGACGCCTCTGCTGAAACACGAGTATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426508.7
ENST00000439987.6
CDS CAA 90 bp CAGGAGCCCTGGAGCCTGGGAAACATCTGGGGACAATTCAGTGCTTaGCAAACAATGTCAGATGGAAGCGGCCAGGGGTGGGCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: QEPWSLGNIWGQFSA*QTMSDGSGQGWAEG
Trigger: CCCCTCTGCCCACCCCTGGCCGCTTCCATCTGACATTGTTTGCAAAGCACTGAATTGTCCCCAGATGTTTCCCAGGCTCCAGGGCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS CAA 90 bp ACGGTGATGTCGGCTGTGTGTGTCAGGGGCATCGTGTGCTGCTCCTaGTCCTGCTTGTTAAACACCGTCACTTCTCCAGTCTCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: TVMSAVCVRGIVCCS*SCLLNTVTSPVSQP
Trigger: GGGCTGGGAGACTGGAGAAGTGACGGTGTTTAACAAGCAGGACAAGGAGCAGCACACGATGCCCCTGACACACACAGCCGACATCACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
ENST00000566052.1
ENST00000569646.5
ENST00000569812.1
CDS CAA 90 bp GTGCGTGAGGTGTTTCCCATACTCGTGTTTCAGCAGAGGCGTCCCTaGCACTCGGCCCCTTTGGTCCAACCTCCACAAGAGCAAGACACC +
Preference number: 6 (lower is better)
Translates to: VREVFPILVFQQRRP*HSAPLVQPPQEQDT
Trigger: GGTGTCTTGCTCTTGTGGAGGTTGGACCAAAGGGGCCGAGTGCAAGGGACGCCTCTGCTGAAACACGAGTATGGGAAACACCTCACGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426508.7
ENST00000439987.6
CDS GCA 72 bp CATCACGAGAAGGCTGCCTTCAATCAAAGCGATGTCTaGCCGGCGGCCGGTTTTCCCGCTCAGCTTGACCTT +
Preference number: 6 (lower is better)
Translates to: HHEKAAFNQSDV*PAAGFPAQLDL
Trigger: AAGGTCAAGCTGAGCGGGAAAACCGGCCGCCGGGCAGACATCGCTTTGATTGAAGGCAGCCTTCTCGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426508.7
ENST00000439987.6
CDS GCA 72 bp CTAACTAGACGGGAACAAGCTGCGCCAACCAAGGGTTaGTCACGGCCCACCTCTCCTTCTCTGGTTTCAGGC +
Preference number: 6 (lower is better)
Translates to: LTRREQAAPTKG*SRPTSPSLVSG
Trigger: GCCTGAAACCAGAGAAGGAGAGGTGGGCCGTGAGCAACCCTTGGTTGGCGCAGCTTGTTCCCGTCTAGTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439987.6
CDS GCA 72 bp AGCACCAGAGAGGCTGAGAGCTTCCCACGTGGCATCTaGAAGCTGGGCAGCATTTCATCGAGTGGGAAGACC +
Preference number: 6 (lower is better)
Translates to: STREAESFPRGI*KLGSISSSGKT
Trigger: GGTCTTCCCACTCGATGAAATGCTGCCCAGCTTGCAGATGCCACGTGGGAAGCTCTCAGCCTCTCTGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561954.1
CDS CCA 72 bp TGTTTCAGCAGAGGCGTCCCTTGCACTCGGCCCCTTTaGTCCAACCTCCACAAGAGCAAGACACCAAGCCTG +
Preference number: 6 (lower is better)
Translates to: CFSRGVPCTRPL*SNLHKSKTPSL
Trigger: CAGGCTTGGTGTCTTGCTCTTGTGGAGGTTGGACCAAAGGGGCCGAGTGCAAGGGACGCCTCTGCTGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426508.7
ENST00000439987.6
CDS CAA 72 bp GTGTTTCAGCAGAGGCGTCCCTTGCACTCGGCCCCTTaGGTCCAACCTCCACAAGAGCAAGACACCAAGCCT +
Preference number: 6 (lower is better)
Translates to: VFQQRRPLHSAP*VQPPQEQDTKP
Trigger: AGGCTTGGTGTCTTGCTCTTGTGGAGGTTGGACCAAAGGGGCCGAGTGCAAGGGACGCCTCTGCTGAAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426508.7
ENST00000439987.6
CDS CAA 72 bp CTTCCTGGAACCCCACTGGATTTGCGTGATGTTTCCTaGGAGCTCGGTAGGGGTCTGAAGGGCCCACCTGTC +
Preference number: 6 (lower is better)
Translates to: LPGTPLDLRDVS*ELGRGLKGPPV
Trigger: GACAGGTGGGCCCTTCAGACCCCTACCGAGCTCCAAGGAAACATCACGCAAATCCAGTGGGGTTCCAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426508.7
ENST00000439987.6
CDS CAA 90 bp GCTGAGATTCTGGAATGTGGCCGGGTGCGAACCCGCCCCTTCACTTaGACACACTGCTCAGCGATCTCTGCGGTGATGGGTTTTAAGGAG +
Preference number: 6 (lower is better)
Translates to: AEILECGRVRTRPFT*THCSAISAVMGFKE
Trigger: CTCCTTAAAACCCATCACCGCAGAGATCGCTGAGCAGTGTGTCAAAGTGAAGGGGCGGGTTCGCACCCGGCCACATTCCAGAATCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS TCA 72 bp GTCACTGACACGATTCTCTCTGTCCACTTTTCCACTTaGAGCTCTCCTCAGGGGACCTCGAGAAGCGCCGGC +
Preference number: 6 (lower is better)
Translates to: VTDTILSVHFST*SSPQGTSRSAG
Trigger: GCCGGCGCTTCTCGAGGTCCCCTGAGGAGAGCTTCAAGTGGAAAAGTGGACAGAGAGAATCGTGTCAGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS GCA 72 bp GAATCGTGCTGTCTGCGGACACCACCTGAGTGGTCTTaGCCTTCTCATCCACATAGTGCACTGTCCCGTCCA +
Preference number: 6 (lower is better)
Translates to: ESCCLRTPPEWS*PSHPHSALSRP
Trigger: TGGACGGGACAGTGCACTATGTGGATGAGAAGGGCAAGACCACTCAGGTGGTGTCCGCAGACAGCACGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426508.7
ENST00000439987.6
CDS CCA 72 bp TTTGAGCCGTTAAGCCTTCGTTTCAGGAGCCTTGTGTaGCGGGATGCTGCTAGTGAGCAGCACTCAGGCCTC +
Preference number: 6 (lower is better)
Translates to: FEPLSLRFRSLV*RDAASEQHSGL
Trigger: GAGGCCTGAGTGCTGCTCACTAGCAGCATCCCGCCACACAAGGCTCCTGAAACGAAGGCTTAACGGCTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568837.1
CDS CAA 72 bp TGTGTCAGGGGCATCGTGTGCTGCTCCTTGTCCTGCTaGTTAAACACCGTCACTTCTCCAGTCTCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: CVRGIVCCSLSC*LNTVTSPVSQP
Trigger: GGGCTGGGAGACTGGAGAAGTGACGGTGTTTAACAAGCAGGACAAGGAGCAGCACACGATGCCCCTGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
ENST00000566052.1
ENST00000569646.5
ENST00000569812.1
CDS CAA 90 bp ACTCTCGAGCATGGTCAGAAAGGGTCAAGGTCTGAAAACAGCGTCTaGCGCGTGTTGACTCACCCTGTCCCCAGACAGCAGGCAGTTTCC +
Preference number: 6 (lower is better)
Translates to: TLEHGQKGSRSENSV*RVLTHPVPRQQAVS
Trigger: GGAAACTGCCTGCTGTCTGGGGACAGGGTGAGTCAACACGCGCAAGACGCTGTTTTCAGACCTTGACCCTTTCTGACCATGCTCGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566052.1
CDS TCA 72 bp CCGGGGCTTCTATCTGGTGGTCATAATAGAGGGCCATaGCGGAACTCAGGCCTCCTCAGCGCTGAAACTTTC +
Preference number: 6 (lower is better)
Translates to: PGLLSGGHNRGP*RNSGLLSAETF
Trigger: GAAAGTTTCAGCGCTGAGGAGGCCTGAGTTCCGTCATGGCCCTCTATTATGACCACCAGATAGAAGCCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569812.1
CDS GCA 72 bp GTGTGTGTCAGGGGCATCGTGTGCTGCTCCTTGTCCTaGTTGTTAAACACCGTCACTTCTCCAGTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: VCVRGIVCCSLS*LLNTVTSPVSQ
Trigger: CTGGGAGACTGGAGAAGTGACGGTGTTTAACAAGCAGGACAAGGAGCAGCACACGATGCCCCTGACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
ENST00000566052.1
ENST00000569646.5
ENST00000569812.1
CDS GCA 72 bp ACGGTGATGTCGGCTGTGTGTGTCAGGGGCATCGTGTaGTGCTCCTTGTCCTGCTTGTTAAACACCGTCACT +
Preference number: 6 (lower is better)
Translates to: TVMSAVCVRGIV*CSLSCLLNTVT
Trigger: AGTGACGGTGTTTAACAAGCAGGACAAGGAGCAGCACACGATGCCCCTGACACACACAGCCGACATCACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
ENST00000566052.1
ENST00000569646.5
ENST00000569812.1
CDS GCA 72 bp CCTCCCTCTTCTCCATGTAGAACAGCATCTGAATCGTaGTGTCTGCGGACACCACCTGAGTGGTCTTGCCCT +
Preference number: 6 (lower is better)
Translates to: PPSSPCRTASES*CLRTPPEWSCP
Trigger: AGGGCAAGACCACTCAGGTGGTGTCCGCAGACAGCACGATTCAGATGCTGTTCTACATGGAGAAGAGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426508.7
ENST00000439987.6
CDS GCA 72 bp GGTTTTCCCGCTCAGCTTGACCTTCATCACTTCTTCTaGTTTGCCCTCAGGAGGCACCGTGTACAGGGACAG +
Preference number: 6 (lower is better)
Translates to: GFPAQLDLHHFF*FALRRHRVQGQ
Trigger: CTGTCCCTGTACACGGTGCCTCCTGAGGGCAAAGCAGAAGAAGTGATGAAGGTCAAGCTGAGCGGGAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426508.7
ENST00000439987.6
CDS CCA 72 bp GCATCTGAATCGTGCTGTCTGCGGACACCACCTGAGTaGTCTTGCCCTTCTCATCCACATAGTGCACTGTCC +
Preference number: 6 (lower is better)
Translates to: ASESCCLRTPPE*SCPSHPHSALS
Trigger: GGACAGTGCACTATGTGGATGAGAAGGGCAAGACCACTCAGGTGGTGTCCGCAGACAGCACGATTCAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426508.7
ENST00000439987.6
CDS CCA 72 bp AGAGCCGTGAGCACGCGCTATCTCCCAACATCCCAGTaGTCGGGATCCTCACCTTTTGATGAGCTTGATGGA +
Preference number: 6 (lower is better)
Translates to: RAVSTRYLPTSQ*SGSSPFDELDG
Trigger: TCCATCAAGCTCATCAAAAGGTGAGGATCCCGACCACTGGGATGTTGGGAGATAGCGCGTGCTCACGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561954.1
CDS CAA 72 bp TCGGCTGTGTGTGTCAGGGGCATCGTGTGCTGCTCCTaGTCCTGCTTGTTAAACACCGTCACTTCTCCAGTC +
Preference number: 6 (lower is better)
Translates to: SAVCVRGIVCCS*SCLLNTVTSPV
Trigger: GACTGGAGAAGTGACGGTGTTTAACAAGCAGGACAAGGAGCAGCACACGATGCCCCTGACACACACAGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
ENST00000566052.1
ENST00000569646.5
ENST00000569812.1
CDS GCA 72 bp GTGATGTCGGCTGTGTGTGTCAGGGGCATCGTGTGCTaGTCCTTGTCCTGCTTGTTAAACACCGTCACTTCT +
Preference number: 6 (lower is better)
Translates to: VMSAVCVRGIVC*SLSCLLNTVTS
Trigger: AGAAGTGACGGTGTTTAACAAGCAGGACAAGGAGCAGCACACGATGCCCCTGACACACACAGCCGACATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
ENST00000566052.1
ENST00000569646.5
ENST00000569812.1
CDS CAA 72 bp TGGAGCCTGGGAAACATCTGGGGACAATTCAGTGCTTaGCAAACAATGTCAGATGGAAGCGGCCAGGGGTGG +
Preference number: 6 (lower is better)
Translates to: WSLGNIWGQFSA*QTMSDGSGQGW
Trigger: CCACCCCTGGCCGCTTCCATCTGACATTGTTTGCAAAGCACTGAATTGTCCCCAGATGTTTCCCAGGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS TCA 72 bp CCGTCCATCAGACTGACAAAGAACAACAGCCCCTCGTaGGACCCCATCTTCAGCAAACTTCCAGAACTGCTC +
Preference number: 6 (lower is better)
Translates to: PSIRLTKNNSPS*DPIFSKLPELL
Trigger: GAGCAGTTCTGGAAGTTTGCTGAAGATGGGGTCTCACGAGGGGCTGTTGTTCTTTGTCAGTCTGATGGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426508.7
ENST00000439987.6
CDS GCA 72 bp CTTCTCCATGTAGAACAGCATCTGAATCGTGCTGTCTaGGGACACCACCTGAGTGGTCTTGCCCTTCTCATC +
Preference number: 6 (lower is better)
Translates to: LLHVEQHLNRAV*GHHLSGLALLI
Trigger: GATGAGAAGGGCAAGACCACTCAGGTGGTGTCCGCAGACAGCACGATTCAGATGCTGTTCTACATGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426508.7
ENST00000439987.6
CDS CAA 90 bp GCACGCGCTATCTCCCAACATCCCAGTGGTCGGGATCCTCACCTTTaGATGAGCTTGATGGATTTGAAGGCTTCGTCCATGTCTCCTATG +
Preference number: 6 (lower is better)
Translates to: ARAISQHPSGRDPHL*MSLMDLKASSMSPM
Trigger: CATAGGAGACATGGACGAAGCCTTCAAATCCATCAAGCTCATCAAAAGGTGAGGATCCCGACCACTGGGATGTTGGGAGATAGCGCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561954.1
CDS TCA 72 bp CTCCCCTTGCTCCAGGTAAATATCCACGCTGCCTGTTaGGGTTGTGCTGATGTAAGCAACTGCCAAGAATGG +
Preference number: 6 (lower is better)
Translates to: LPLLQVNIHAAC*GCADVSNCQEW
Trigger: CCATTCTTGGCAGTTGCTTACATCAGCACAACCTCAACAGGCAGCGTGGATATTTACCTGGAGCAAGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
ENST00000566052.1
ENST00000569646.5
ENST00000569812.1
CDS TCA 72 bp TCATACTCTCGAGCATGGTCAGAAAGGGTCAAGGTCTaGAAACAGCGTCTTGCGCGTGTTGACTCACCCTGT +
Preference number: 6 (lower is better)
Translates to: SYSRAWSERVKV*KQRLARVDSPC
Trigger: ACAGGGTGAGTCAACACGCGCAAGACGCTGTTTTCAGACCTTGACCCTTTCTGACCATGCTCGAGAGTATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566052.1
CDS GCA 72 bp CTTTCAGGCGTCCAGCGTCTCCAGAGCCTCTACAAGTaGCTCCATCAAACCAGCTTTTGGGAAAGAATCTGT +
Preference number: 6 (lower is better)
Translates to: LSGVQRLQSLYK*LHQTSFWERIC
Trigger: ACAGATTCTTTCCCAAAAGCTGGTTTGATGGAGGCACTTGTAGAGGCTCTGGAGACGCTGGACGCCTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569812.1
CDS CCA 72 bp CAACCAAGGGTTGCTCACGGCCCACCTCTCCTTCTCTaGTTTCAGGCTCTTTTGATGAGCTTGATGGATTTG +
Preference number: 6 (lower is better)
Translates to: QPRVAHGPPLLL*FQALLMSLMDL
Trigger: CAAATCCATCAAGCTCATCAAAAGAGCCTGAAACCAGAGAAGGAGAGGTGGGCCGTGAGCAACCCTTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439987.6
CDS TCA 72 bp CCAGGTAAATATCCACGCTGCCTGTTGAGGTTGTGCTaGTGTAAGCAACTGCCAAGAATGGATGGACAGGGT +
Preference number: 6 (lower is better)
Translates to: PGKYPRCLLRLC*CKQLPRMDGQG
Trigger: ACCCTGTCCATCCATTCTTGGCAGTTGCTTACATCAGCACAACCTCAACAGGCAGCGTGGATATTTACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
ENST00000566052.1
ENST00000569646.5
ENST00000569812.1
CDS CAA 72 bp ATCTCCCAACATCCCAGTGGTCGGGATCCTCACCTTTaGATGAGCTTGATGGATTTGAAGGCTTCGTCCATG +
Preference number: 6 (lower is better)
Translates to: ISQHPSGRDPHL*MSLMDLKASSM
Trigger: CATGGACGAAGCCTTCAAATCCATCAAGCTCATCAAAAGGTGAGGATCCCGACCACTGGGATGTTGGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561954.1
CDS CAA 90 bp CTTGAACTCGGTTTGACTCCACCGTGTAAACGTTTTCTTCATGCATaGCTAACACAGGCGTCTCACACAAGAAGGTCCCTGCACTCCGTA +
Preference number: 6 (lower is better)
Translates to: LELGLTPPCKRFLHA*LTQASHTRRSLHSV
Trigger: TACGGAGTGCAGGGACCTTCTTGTGTGAGACGCCTGTGTTAGCAATGCATGAAGAAAACGTTTACACGGTGGAGTCAAACCGAGTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
ENST00000565298.5
CDS CAA 90 bp CATCCCAGTGGTCGGGATCCTCACCTTTTGATGAGCTTGATGGATTaGAAGGCTTCGTCCATGTCTCCTATGGTGACAAAGAAGCTGAAG +
Preference number: 6 (lower is better)
Translates to: HPSGRDPHLLMSLMD*KASSMSPMVTKKLK
Trigger: CTTCAGCTTCTTTGTCACCATAGGAGACATGGACGAAGCCTTCAAATCCATCAAGCTCATCAAAAGGTGAGGATCCCGACCACTGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561954.1
CDS CAA 90 bp ATCTCCCAACATCCCAGTGGTCGGGATCCTCACCTTTTGATGAGCTaGATGGATTTGAAGGCTTCGTCCATGTCTCCTATGGTGACAAAG +
Preference number: 6 (lower is better)
Translates to: ISQHPSGRDPHLLMS*MDLKASSMSPMVTK
Trigger: CTTTGTCACCATAGGAGACATGGACGAAGCCTTCAAATCCATCAAGCTCATCAAAAGGTGAGGATCCCGACCACTGGGATGTTGGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561954.1
CDS CAA 72 bp GGTTTGACTCCACCGTGTAAACGTTTTCTTCATGCATaGCTAACACAGGCGTCTCACACAAGAAGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: GLTPPCKRFLHA*LTQASHTRRSL
Trigger: CAGGGACCTTCTTGTGTGAGACGCCTGTGTTAGCAATGCATGAAGAAAACGTTTACACGGTGGAGTCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397417.6
ENST00000426508.7
ENST00000439987.6
ENST00000565298.5
CDS CCA 72 bp TCTGCGGTGATGGGTTTTAAGGAGCTGATGACTTACTaGGTTTGTCTACAAGGATTTTCCGATGCTCTGGGT +
Preference number: 6 (lower is better)
Translates to: SAVMGFKELMTY*VCLQGFSDALG
Trigger: ACCCAGAGCATCGGAAAATCCTTGTAGACAAACCCAGTAAGTCATCAGCTCCTTAAAACCCATCACCGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS GCA 72 bp ATTTTCCGATGCTCTGGGTTCTATTTCACAGAGCACTaGAAGAAATACCTGACACGGGAGATGCTTCTGGAA +
Preference number: 6 (lower is better)
Translates to: IFRCSGFYFTEH*KKYLTREMLLE
Trigger: TTCCAGAAGCATCTCCCGTGTCAGGTATTTCTTGCAGTGCTCTGTGAAATAGAACCCAGAGCATCGGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS CAA 72 bp CTCTGGTTTCAGGCTCTTTTGATGAGCTTGATGGATTaGAAGGCTTCGTCCATGTCTCCTATGGTGACAAAG +
Preference number: 6 (lower is better)
Translates to: LWFQALLMSLMD*KASSMSPMVTK
Trigger: CTTTGTCACCATAGGAGACATGGACGAAGCCTTCAAATCCATCAAGCTCATCAAAAGAGCCTGAAACCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439987.6
CDS GCA 72 bp GATGACTTACTGGGTTTGTCTACAAGGATTTTCCGATaGTCTGGGTTCTATTTCACAGAGCACTGCAAGAAA +
Preference number: 6 (lower is better)
Translates to: DDLLGLSTRIFR*SGFYFTEHCKK
Trigger: TTTCTTGCAGTGCTCTGTGAAATAGAACCCAGAGCATCGGAAAATCCTTGTAGACAAACCCAGTAAGTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565298.5
CDS CCA 72 bp CTTACTGGGTTTGTCTACAAGGATTTTCCGATGCTCTaGGTTCTATTTCACAGAGCACTGCAAGAAATACCT +
Preference number: 6 (lower is better)
Translates to: LTGFVYKDFPML*VLFHRALQEIP
Trigger: AGGTATTTCTTGCAGTGCTCTGTGAAATAGAACCCAGAGCATCGGAAAATCCTTGTAGACAAACCCAGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565298.5