RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IFRD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000006652

Ensembl transcript IDs: ENST00000005558.8, ENST00000403825.8, ENST00000417662.1, ENST00000421296.1, ENST00000429071.5, ENST00000432734.1, ENST00000440625.5, ENST00000443101.6, ENST00000445335.1, ENST00000462155.2, ENST00000470441.1, ENST00000476927.5, ENST00000486688.1, ENST00000489994.5, ENST00000535603.5, ENST00000621379.4, ENST00000674887.1, ENST00000674915.1, ENST00000675041.1, ENST00000675578.1, ENST00000675717.1

Found 647 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGAAAATCCCGTTCCTCCACTGCCCTCAGGACATCTCTGAAAACTaGCCGCTGCTTTCTCTTGTCCACTTTGGCCCGGTGTTTATTTCC +
Preference number: 1 (lower is better)
Translates to: WKIPFLHCPQDISEN*PLLSLVHFGPVFIS
Trigger: GGAAATAAACACCGGGCCAAAGTGGACAAGAGAAAGCAGCGGTCAGTTTTCAGAGATGTCCTGAGGGCAGTGGAGGAACGGGATTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674887.1
ENST00000675041.1
3UTR GCA 90 bp TCCCGTTCCTCCACTGCCCTCAGGACATCTCTGAAAACTGACCGCTaGTTTCTCTTGTCCACTTTGGCCCGGTGTTTATTTCCATCTGTT +
Preference number: 1 (lower is better)
Translates to: SRSSTALRTSLKTDR*FLLSTLARCLFPSV
Trigger: AACAGATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAAGCAGCGGTCAGTTTTCAGAGATGTCCTGAGGGCAGTGGAGGAACGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674887.1
ENST00000675041.1
3UTR GCA 90 bp CTGCTTTCTCTTGTCCACTTTGGCCCGGTGTTTATTTCCATCTGTTaGCAAGGCCCTAAGCATCTGCGTCAAGGACTCCATGTCTTCATA +
Preference number: 1 (lower is better)
Translates to: LLSLVHFGPVFISIC*QGPKHLRQGLHVFI
Trigger: TATGAAGACATGGAGTCCTTGACGCAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
3UTR CCA 90 bp CTGAAGCAACTGTTAGCTGACACCACCTTTCCAGCACTCCTGCCATaGTATGCTTCCATATATAAATATCCTGTAGCAGGCGGAAGCTGC +
Preference number: 1 (lower is better)
Translates to: LKQLLADTTFPALLP*YASIYKYPVAGGSC
Trigger: GCAGCTTCCGCCTGCTACAGGATATTTATATATGGAAGCATACCATGGCAGGAGTGCTGGAAAGGTGGTGTCAGCTAACAGTTGCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462155.2
3UTR TCA 90 bp GGGCATATGGTCAGCAGTAGTGTCCATGCAAGAAGAGAGCTGATATaGAGCACTGTATTAGGAGTGCTGCAAATAACAGTAGTGTCTTTC +
Preference number: 1 (lower is better)
Translates to: GHMVSSSVHARRELI*STVLGVLQITVVSF
Trigger: GAAAGACACTACTGTTATTTGCAGCACTCCTAATACAGTGCTTCATATCAGCTCTCTTCTTGCATGGACACTACTGCTGACCATATGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675717.1
3UTR TCA 90 bp TTGGAAGCTTATGGAAATGCATCTCAAGCTTTTTCTTCACTTCATTaGTTGGGCATATGGTCAGCAGTAGTGTCCATGCAAGAAGAGAGC +
Preference number: 1 (lower is better)
Translates to: LEAYGNASQAFSSLH*LGIWSAVVSMQEES
Trigger: GCTCTCTTCTTGCATGGACACTACTGCTGACCATATGCCCAATCAATGAAGTGAAGAAAAAGCTTGAGATGCATTTCCATAAGCTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675717.1
3UTR-3UTR CCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGAGGCTGGTCTCAAACTaGGCTCATGCCATCCTCCCG +
Preference number: 2 (lower is better)
Translates to: FSLQYICFPTPHGDLQQERLVSN*AHAILP
Trigger: CGGGAGGATGGCATGAGCCCAGTTTGAGACCAGCCT...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGTCACCCAGGCTGGAGTaGCACAATCACGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRSPRLE*HNHGSL
Trigger: CAGTGAGCCGTGATTGTGCCACTCCAGCCTGGGTGA...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGACTCGTCACCCAGGCTaGAGTGGCACAATCACGGCT +
Preference number: 2 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRTRHPG*SGTITA
Trigger: AGCCGTGATTGTGCCACTCCAGCCTGGGTGACGAGT...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR GCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGACAATCACGGCTCACTaGAGCTTTGACCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: FSLQYICFPTPHGDLQQETITAH*SFDLLG
Trigger: GCCCAGGAGGTCAAAGCTGCAGTGAGCCGTGATTGT...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR GCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGACAATCACGGCTCACTaGAGCTTTGACCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRTITAH*SFDLLG
Trigger: GCCCAGGAGGTCAAAGCTGCAGTGAGCCGTGATTGT...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CCA 90 bp TACTTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAAGGCTGGTCTCAAACTaGGCTCATGCCATCCTCCCG +
Preference number: 2 (lower is better)
Translates to: YFSLQYICFPTPHGDLQQRLVSN*AHAILP
Trigger: CGGGAGGATGGCATGAGCCCAGTTTGAGACCAGCCT...TTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CCA 90 bp TACTTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAATCACCCAGGCTGGAGTaGCACAATCACGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: YFSLQYICFPTPHGDLQQSPRLE*HNHGSL
Trigger: CAGTGAGCCGTGATTGTGCCACTCCAGCCTGGGTGA...TTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR GCA 90 bp TACTTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAACAATCACGGCTCACTaGAGCTTTGACCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: YFSLQYICFPTPHGDLQQTITAH*SFDLLG
Trigger: GCCCAGGAGGTCAAAGCTGCAGTGAGCCGTGATTGT...TTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGCTATGTTGCCCAGGCTaGTCTCAAACTGGGCTCATG +
Preference number: 2 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRLCCPG*SQTGLM
Trigger: CATGAGCCCAGTTTGAGACCAGCCTGGGCAACATAG...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGGCAGCTTTGACCTCCTaGGCTCAAGTTACCCTCTTG +
Preference number: 2 (lower is better)
Translates to: FSLQYICFPTPHGDLQQEAALTS*AQVTLL
Trigger: CAAGAGGGTAACTTGAGCCCAGGAGGTCAAAGCTGC...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGGCAGCTTTGACCTCCTaGGCTCAAGTTACCCTCTTG +
Preference number: 2 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRAALTS*AQVTLL
Trigger: CAAGAGGGTAACTTGAGCCCAGGAGGTCAAAGCTGC...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CCA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTAGGCTGGTCTCAAACTaGGCTCATGCCATCCTCCCG +
Preference number: 2 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCRLVSN*AHAILP
Trigger: CGGGAGGATGGCATGAGCCCAGTTTGAGACCAGCCT...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CCA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTTCACCCAGGCTGGAGTaGCACAATCACGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCSPRLE*HNHGSL
Trigger: CAGTGAGCCGTGATTGTGCCACTCCAGCCTGGGTGA...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR GCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGCTCAAGTTACCCTCTTaGCTCAGCACCCAAGTAGAT +
Preference number: 2 (lower is better)
Translates to: FSLQYICFPTPHGDLQQELKLPS*LSTQVD
Trigger: ATCTACTTGGGTGCTGAGGCAAGAGGGTAACTTGAG...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR GCA 90 bp CTTTCTCTTGTCCACTTTGGCCCGGTGTTTATTTCCATCTGTTGCCAAGGCCCTAAGGCCCTAAGCATCTaGGTCAAGGACTCCATGTCT +
Preference number: 2 (lower is better)
Translates to: LSLVHFGPVFISICCQGPKALSI*VKDSMS
Trigger: AGACATGGAGTCCTTGACGCAGATGCTTAGGGCCTT...AGGGCCTTGGCAACAGATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
3UTR-3UTR GCA 90 bp TACTTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAACTCAAGTTACCCTCTTaGCTCAGCACCCAAGTAGAT +
Preference number: 2 (lower is better)
Translates to: YFSLQYICFPTPHGDLQQLKLPS*LSTQVD
Trigger: ATCTACTTGGGTGCTGAGGCAAGAGGGTAACTTGAG...TTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGACTCGTCACCCAGGCTaGAGTGGCACAATCACGGCT +
Preference number: 2 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWTRHPG*SGTITA
Trigger: AGCCGTGATTGTGCCACTCCAGCCTGGGTGACGAGT...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR TCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGACAAGTCTACGGATTTaGAATGGCATGTTGCTTGCA +
Preference number: 2 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRTSLRI*NGMLLA
Trigger: TGCAAGCAACATGCCATTTCAAATCCGTAGACTTGT...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR TCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGACAAGTCTACGGATTTaGAATGGCATGTTGCTTGCA +
Preference number: 2 (lower is better)
Translates to: FSLQYICFPTPHGDLQQETSLRI*NGMLLA
Trigger: TGCAAGCAACATGCCATTTCAAATCCGTAGACTTGT...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR GCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGAGCCACACTGCATGTTaGCAAGCAGAAATATTCTTG +
Preference number: 2 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRSHTAC*QAEIFL
Trigger: CAAGAATATTTCTGCTTGGCAACATGCAGTGTGGCT...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR GCA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTTCCCTACAGTATATATaGTTCCCTACCCCTCACGGC +
Preference number: 2 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCSLQYI*FPTPHG
Trigger: GCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGA...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR GCA 90 bp TTTGACTGCAAGTGGTACTGCATCCCTGATCCAAGAACCTCCTTAAAGGTGTCAAAGGCCCTAAGCATCTaGGTCAAGGACTCCATGTCT +
Preference number: 2 (lower is better)
Translates to: FDCKWYCIPDPRTSLKVSKALSI*VKDSMS
Trigger: AGACATGGAGTCCTTGACGCAGATGCTTAGGGCCTT...TGACACCTTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
3UTR-3UTR TCA 90 bp TACTTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAACAAGTCTACGGATTTaGAATGGCATGTTGCTTGCA +
Preference number: 2 (lower is better)
Translates to: YFSLQYICFPTPHGDLQQTSLRI*NGMLLA
Trigger: TGCAAGCAACATGCCATTTCAAATCCGTAGACTTGT...TTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR GCA 90 bp CCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTCGAGCTTTGGACTGCAAGTGGTACTaGATCCCTGATCCAAGAACC +
Preference number: 2 (lower is better)
Translates to: PTSALLSRHLLLALVRALDCKWY*IPDPRT
Trigger: GGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTC...CAAAGCTCGAACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
3UTR-3UTR CCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCACTCGTCACCCAGGCTaGAGTGGCACAATCACGGCT +
Preference number: 2 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSTRHPG*SGTITA
Trigger: AGCCGTGATTGTGCCACTCCAGCCTGGGTGACGAGT...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CCA 90 bp ACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCTCATTTGACTGCAAGTaGTACTGCATCCCTGATCCA +
Preference number: 2 (lower is better)
Translates to: TRNLHRFKRCSIKHHWGSSFDCK*YCIPDP
Trigger: TGGATCAGGGATGCAGTACCACTTGCAGTCAAATGA...GGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
3UTR-3UTR TCA 90 bp CCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTCGAGCTTTGGTGGTACTGCATCCCTaGTCCAAGAACCTCCTTAAA +
Preference number: 2 (lower is better)
Translates to: PTSALLSRHLLLALVRALVVLHP*SKNLLK
Trigger: TTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCAC...CAAAGCTCGAACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
3UTR-3UTR GCA 90 bp CATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACCTGAAAACTGACCGCTaGTTTCTCTTGTCCACTTTG +
Preference number: 2 (lower is better)
Translates to: HRFKRCSIKHHWGSKFKYLKTDR*FLLSTL
Trigger: CAAAGTGGACAAGAGAAAGCAGCGGTCAGTTTTCAG...GTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
3UTR-3UTR CCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATAAGGCTGGTCTCAAACTaGGCTCATGCCATCCTCCCG +
Preference number: 2 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGIRLVSN*AHAILP
Trigger: CGGGAGGATGGCATGAGCCCAGTTTGAGACCAGCCT...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCACTCGTCACCCAGGCTaGAGTGGCACAATCACGGCT +
Preference number: 2 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDATRHPG*SGTITA
Trigger: AGCCGTGATTGTGCCACTCCAGCCTGGGTGACGAGT...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGACTTCCAAGAGTTGTTaGGATGTGGGAGGGGAACAC +
Preference number: 2 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWTSKSC*DVGGEH
Trigger: GTGTTCCCCTCCCACATCCCAACAACTCTTGGAAGT...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCCCACTGCACTGTAACTaGGGGATGGGACTCAGCAAC +
Preference number: 2 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSPLHCN*GMGLSN
Trigger: GTTGCTGAGTCCCATCCCCCAGTTACAGTGCAGTGG...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR GCA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTAAAGCTTTGTCTCCCTaGCCACCTGGCCTAGTCATT +
Preference number: 2 (lower is better)
Translates to: NQCYCSQMLRLATFLAYAKALSP*PPGLVI
Trigger: AATGACTAGGCCAGGTGGGCAGGGAGACAAAGCTTT...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR GCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCACAATCACGGCTCACTaGAGCTTTGACCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDATITAH*SFDLLG
Trigger: GCCCAGGAGGTCAAAGCTGCAGTGAGCCGTGATTGT...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR GCA 90 bp GAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTAAGGCCCTAAGCATCTaGGTCAAGGACTCCATGTCT +
Preference number: 2 (lower is better)
Translates to: EEFSNICSLISTFASSFGKALSI*VKDSMS
Trigger: AGACATGGAGTCCTTGACGCAGATGCTTAGGGCCTT...ACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
3UTR-3UTR CCA 90 bp GGTACATATAAATTAACTCTTGAGAACTGTATACACCACAAGTGTGGGGCAAATGTGGTCTCCAACTCCTaGCTTCCAGCAATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: GTYKLTLENCIHHKCGANVVSNS*LPAILP
Trigger: TGGGAGGATTGCTGGAAGCCAGGAGTTGGAGACCAC...ATTTGCCCCACACTTGTGGTGTATACAGTTCTCAAGAGTTAATTTATATGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429071.5
3UTR-3UTR CCA 90 bp ACTGAAGTTACCGTCCTTATCTGGCTGAAGCAACTGTTAGCTGACACCACCTTTCCAGCACTCCTGCCATaGTATGCTTCCATATATAAA +
Preference number: 2 (lower is better)
Translates to: TEVTVLIWLKQLLADTTFPALLP*YASIYK
Trigger: TTTATATATGGAAGCATACCATGGCAGGAGTGCTGG...AAAGGTGGTGTCAGCTAACAGTTGCTTCAGCCAGATAAGGACGGTAACTTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462155.2
3UTR-3UTR TCA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTGTGGTACTGCATCCCTaGTCCAAGAACCTCCTTAAA +
Preference number: 2 (lower is better)
Translates to: NQCYCSQMLRLATFLAYAVVLHP*SKNLLK
Trigger: TTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCAC...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
3UTR-3UTR GCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAAAGCTTTGTCTCCCTaGCCACCTGGCCTAGTCATT +
Preference number: 2 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSKALSP*PPGLVI
Trigger: AATGACTAGGCCAGGTGGGCAGGGAGACAAAGCTTT...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR GCA 90 bp GTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTTTATTTCCATCTGTTaGCAAGGCCCTAAGCATCTG +
Preference number: 2 (lower is better)
Translates to: VAASSITGGPSSNTFRRNFISIC*QGPKHL
Trigger: CAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAA...ATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
3UTR-3UTR GCA 90 bp TGGTTTCTGTTGGAAAATCCCGTTCCTATTATCCTCTTTCCTGTTGGTAACAGACAAGTTTGCCTAGCCTaGATACTAGCTGACCCATCA +
Preference number: 2 (lower is better)
Translates to: WFLLENPVPIILFPVGNRQVCLA*ILADPS
Trigger: TGATGGGTCAGCTAGTATGCAGGCTAGGCAAACTTG...TCTGTTACCAACAGGAAAGAGGATAATAGGAACGGGATTTTCCAACAGAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675717.1
3UTR-3UTR CCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATAGCAGCTTTGACCTCCTaGGCTCAAGTTACCCTCTTG +
Preference number: 2 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGIAALTS*AQVTLL
Trigger: CAAGAGGGTAACTTGAGCCCAGGAGGTCAAAGCTGC...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCACTTCCAAGAGTTGTTaGGATGTGGGAGGGGAACAC +
Preference number: 2 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSTSKSC*DVGGEH
Trigger: GTGTTCCCCTCCCACATCCCAACAACTCTTGGAAGT...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CCA 90 bp GTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTTCATTTGACTGCAAGTaGTACTGCATCCCTGATCCA +
Preference number: 2 (lower is better)
Translates to: VLSVAASSITGGPSSNTFSFDCK*YCIPDP
Trigger: TGGATCAGGGATGCAGTACCACTTGCAGTCAAATGA...AAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
3UTR CAA 90 bp CTTGGAAGCTTATGGAAATGCATCTCAAGCTTTTTCTTCACTTCATaGATTGGGCATATGGTCAGCAGTAGTGTCCATGCAAGAAGAGAG +
Preference number: 2 (lower is better)
Translates to: LGSLWKCISSFFFTS*IGHMVSSSVHARRE
Trigger: CTCTCTTCTTGCATGGACACTACTGCTGACCATATGCCCAATCAATGAAGTGAAGAAAAAGCTTGAGATGCATTTCCATAAGCTTCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675717.1
3UTR-3UTR TCA 90 bp GGTACATATAAATTAACTCTTGAGAACTGTATACACCACAAGTGTGGGGCAAATCCACAATTACAGATGTaGACCACCATGCCGAGTCAC +
Preference number: 2 (lower is better)
Translates to: GTYKLTLENCIHHKCGANPQLQM*TTMPSH
Trigger: GTGACTCGGCATGGTGGTTCACATCTGTAATTGTGG...ATTTGCCCCACACTTGTGGTGTATACAGTTCTCAAGAGTTAATTTATATGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429071.5
3UTR-3UTR GCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATAAAAGCTTTGTCTCCCTaGCCACCTGGCCTAGTCATT +
Preference number: 2 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGIKALSP*PPGLVI
Trigger: AATGACTAGGCCAGGTGGGCAGGGAGACAAAGCTTT...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR GCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCCTCAAGTTACCCTCTTaGCTCAGCACCCAAGTAGAT +
Preference number: 2 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSLKLPS*LSTQVD
Trigger: ATCTACTTGGGTGCTGAGGCAAGAGGGTAACTTGAG...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR GCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAAACCTGTTTTCCACTaGACTGTAACTGGGGGATGG +
Preference number: 2 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSKPVFH*TVTGGW
Trigger: CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTT...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR GCA 90 bp CAGCTTAGACCCACCTCAGTTTTCCTAGGCCTTTCTTTATTCTATTCAATGGAACTCGGTCTCCCAAAGTaGCACAATTACAGATGTGAA +
Preference number: 2 (lower is better)
Translates to: QLRPTSVFLGLSLFYSMELGLPK*HNYRCE
Trigger: TTCACATCTGTAATTGTGGCACTTTGGGAGACCGAG...TTCCATTGAATAGAATAAAGAAAGGCCTAGGAAAACTGAGGTGGGTCTAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429071.5
3UTR-3UTR GCA 90 bp CGAGCTTTGAAGGCTGCAGAGTTATATAAATGCCTTTCGAAACGAGAAATCTTCCTGAAAACTGACCGCTaGTTTCTCTTGTCCACTTTG +
Preference number: 2 (lower is better)
Translates to: RALKAAELYKCLSKREIFLKTDR*FLLSTL
Trigger: CAAAGTGGACAAGAGAAAGCAGCGGTCAGTTTTCAG...GAAGATTTCTCGTTTCGAAAGGCATTTATATAACTCTGCAGCCTTCAAAGCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
3UTR-3UTR GCA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTCAAGTTGCACAAGTTTaGCTAGCCTGCATACTAGCT +
Preference number: 2 (lower is better)
Translates to: NQCYCSQMLRLATFLAYAQVAQV*LACILA
Trigger: AGCTAGTATGCAGGCTAGGCAAACTTGTGCAACTTG...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675717.1
3UTR-3UTR GCA 90 bp CATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTTGAACACCAAAGCAAGTTaGACAAGTTTGCCTAGCCTG +
Preference number: 2 (lower is better)
Translates to: HQASLGVQVQIHFEGIHLNTKAS*TSLPSL
Trigger: CAGGCTAGGCAAACTTGTGCAACTTGCTTTGGTGTT...CAAATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675717.1
3UTR-3UTR CCA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTTCTACGGATTTGAAATaGCATGTTGCTTGCACTATA +
Preference number: 2 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCSTDLK*HVACTI
Trigger: TATAGTGCAAGCAACATGCCATTTCAAATCCGTAGA...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CCA 90 bp AAATGCCTTTCGAAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCTCATTTGACTGCAAGTaGTACTGCATCCCTGATCCA +
Preference number: 2 (lower is better)
Translates to: KCLSKREIFIVLSVAASSSFDCK*YCIPDP
Trigger: TGGATCAGGGATGCAGTACCACTTGCAGTCAAATGA...GCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTTCGAAAGGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
3UTR-3UTR CCA 90 bp AATTCATTTGACTGCAAGTGGTACTGCATCCCTGATCCAAGAACCTCCTTAAAGACAAGAGAGGAGGCTTaGAAGCTTATGGAAATGCAT +
Preference number: 2 (lower is better)
Translates to: NSFDCKWYCIPDPRTSLKTREEA*KLMEMH
Trigger: ATGCATTTCCATAAGCTTCCAAGCCTCCTCTCTTGT...CTTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTCAAATGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675717.1
3UTR CAA 90 bp TCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTCGAGCTTaGAAGGCTGCAGAGTTATATAAATGCCTTTCGAAACGAGAAATC +
Preference number: 2 (lower is better)
Translates to: SALLSRHLLLALVRA*KAAELYKCLSKREI
Trigger: GATTTCTCGTTTCGAAAGGCATTTATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
3UTR CAA 90 bp AATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTaGGTTCGAGCTTTGAAGGCTGCAGAGTTATATAAATGCCTTTCG +
Preference number: 2 (lower is better)
Translates to: NSPTSALLSRHLLLA*VRALKAAELYKCLS
Trigger: CGAAAGGCATTTATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
3UTR CAA 90 bp AATGGTTTCTGTTGGAAAATCCCGTTCCTATTATCCTCTTTCCTGTaGGTAACAGACAAACCTCTGTCCCTCCACAATTCAAGGTTAATC +
Preference number: 2 (lower is better)
Translates to: NGFCWKIPFLLSSFL*VTDKPLSLHNSRLI
Trigger: GATTAACCTTGAATTGTGGAGGGACAGAGGTTTGTCTGTTACCAACAGGAAAGAGGATAATAGGAACGGGATTTTCCAACAGAAACCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674915.1
ENST00000675717.1
3UTR-3UTR TCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCGACATCTCTGAAAACTaGCCGCTGCTTTCTCTTGTC +
Preference number: 2 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDADISEN*PLLSLV
Trigger: GACAAGAGAAAGCAGCGGTCAGTTTTCAGAGATGTC...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
3UTR-3UTR GCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCCTCAAGTTACCCTCTTaGCTCAGCACCCAAGTAGAT +
Preference number: 2 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDALKLPS*LSTQVD
Trigger: ATCTACTTGGGTGCTGAGGCAAGAGGGTAACTTGAG...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR GCA 90 bp GAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTTTATTTCCATCTGTTaGCAAGGCCCTAAGCATCTG +
Preference number: 2 (lower is better)
Translates to: EEFSNICSLISTFASSFGFISIC*QGPKHL
Trigger: CAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAA...ACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
3UTR-3UTR TCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAGCCTGCATACTAGCTaGCCCATCACAAATGATTTT +
Preference number: 2 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSSLHTS*PITNDF
Trigger: AAAATCATTTGTGATGGGTCAGCTAGTATGCAGGCT...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675717.1
3UTR-3UTR TCA 90 bp CGAGCTTTGAAGGCTGCAGAGTTATATAAATGCCTTTCGAAACGAGAAATCTTCTTTTCTTCACTTCATTaGTTGGGCATATGGTCAGCA +
Preference number: 2 (lower is better)
Translates to: RALKAAELYKCLSKREIFFSSLH*LGIWSA
Trigger: TGCTGACCATATGCCCAATCAATGAAGTGAAGAAAA...GAAGATTTCTCGTTTCGAAAGGCATTTATATAACTCTGCAGCCTTCAAAGCTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675717.1
3UTR-3UTR CCA 90 bp CTAGCTTTGGTTCGAGCTTTGAAGGCTGCAGAGTTATATAAATGCCTTTCGAAATTTAATGGTTTCTGTTaGAAAATCCCGTTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: LALVRALKAAELYKCLSKFNGFC*KIPFLH
Trigger: GTGGAGGAACGGGATTTTCCAACAGAAACCATTAAA...TTTCGAAAGGCATTTATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAGCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674887.1
ENST00000675041.1
3UTR-3UTR CCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATCATTTGACTGCAAGTaGTACTGCATCCCTGATCCA +
Preference number: 2 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGISFDCK*YCIPDP
Trigger: TGGATCAGGGATGCAGTACCACTTGCAGTCAAATGA...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
3UTR-3UTR GCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCAGCCACACTGCATGTTaGCAAGCAGAAATATTCTTG +
Preference number: 2 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDASHTAC*QAEIFL
Trigger: CAAGAATATTTCTGCTTGGCAACATGCAGTGTGGCT...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCTTCTCTTGTCCACTTTaGCCCGGTGTTTATTTCCAT +
Preference number: 2 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDAFSCPL*PGVYFH
Trigger: ATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAA...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
3UTR-3UTR TCA 90 bp AAAGGTACATATAAATTAACTCTTGAGAACTGTATACACCACAAGTGTGGGGCAAATGAGCTAGATGTCTaGCACACACTTTCAAGCTTT +
Preference number: 2 (lower is better)
Translates to: KGTYKLTLENCIHHKCGANELDV*HTLSSF
Trigger: AAAGCTTGAAAGTGTGTGTCAGACATCTAGCTCATT...TGCCCCACACTTGTGGTGTATACAGTTCTCAAGAGTTAATTTATATGTACCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429071.5
3UTR-3UTR CCA 90 bp CAGCTTAGACCCACCTCAGTTTTCCTAGGCCTTTCTTTATTCTATTCAATGGAAACTTTCAAGCTTTTCTaGTATAACAAGAGAATGACC +
Preference number: 2 (lower is better)
Translates to: QLRPTSVFLGLSLFYSMETFKLF*YNKRMT
Trigger: GGTCATTCTCTTGTTATACCAGAAAAGCTTGAAAGT...TTCCATTGAATAGAATAAAGAAAGGCCTAGGAAAACTGAGGTGGGTCTAAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429071.5
3UTR CAA 90 bp ATTATAGGCATGAGCCACACTGCATGTTGCCAAGCAGAAATATTCTaGAAAGTCAGAAACCTTAATCCCAATTATGTATTGCTACATTCT +
Preference number: 2 (lower is better)
Translates to: IIGMSHTACCQAEIF*KVRNLNPNYVLLHS
Trigger: AGAATGTAGCAATACATAATTGGGATTAAGGTTTCTGACTTTCAAGAATATTTCTGCTTGGCAACATGCAGTGTGGCTCATGCCTATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR CAA 90 bp CACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTaGAAATGGCATGTTGCTTGCACTATATATTTTAATCTAAAGTTT +
Preference number: 2 (lower is better)
Translates to: HGDLQQEYQRNKSTD*KWHVACTIYFNLKF
Trigger: AAACTTTAGATTAAAATATATAGTGCAAGCAACATGCCATTTCAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCTCTACGGATTTGAAATaGCATGTTGCTTGCACTATA +
Preference number: 2 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDASTDLK*HVACTI
Trigger: TATAGTGCAAGCAACATGCCATTTCAAATCCGTAGA...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR TCA 72 bp CCGTTCCTCCACTGCCCTCAGGACATCTCTGAAAACTaGCCGCTGCTTTCTCTTGTCCACTTTGGCCCGGTG +
Preference number: 3 (lower is better)
Translates to: PFLHCPQDISEN*PLLSLVHFGPV
Trigger: CACCGGGCCAAAGTGGACAAGAGAAAGCAGCGGTCAGTTTTCAGAGATGTCCTGAGGGCAGTGGAGGAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674887.1
ENST00000675041.1
3UTR-3UTR CAA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATACACATAAAGCTTaGTCTCCCTGCCCACCTGGC +
Preference number: 3 (lower is better)
Translates to: FSLQYICFPTPHGDLQQEYTHKA*SPCPPG
Trigger: GCCAGGTGGGCAGGGAGACAAAGCTTTATGTGTATA...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR TCA 72 bp AGTTACCGTCCTTATCTGGCTGAAGCAACTGTTAGCTaGCACCACCTTTCCAGCACTCCTGCCATGGTATGC +
Preference number: 3 (lower is better)
Translates to: SYRPYLAEATVS*HHLSSTPAMVC
Trigger: GCATACCATGGCAGGAGTGCTGGAAAGGTGGTGTCAGCTAACAGTTGCTTCAGCCAGATAAGGACGGTAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462155.2
3UTR-3UTR CAA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTATATACACATAAAGCTTaGTCTCCCTGCCCACCTGGC +
Preference number: 3 (lower is better)
Translates to: ASLPLTATYSKSIKETSLYTHKA*SPCPPG
Trigger: GCCAGGTGGGCAGGGAGACAAAGCTTTATGTGTATA...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CAA 90 bp CCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTCGAGCTTTGGACCGCTGCTTTCTCTaGTCCACTTTGGCCCGGTGT +
Preference number: 3 (lower is better)
Translates to: PTSALLSRHLLLALVRALDRCFL*STLARC
Trigger: ACACCGGGCCAAAGTGGACAAGAGAAAGCAGCGGTC...CAAAGCTCGAACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
3UTR-3UTR CAA 90 bp CGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAGCAAGTTGCACAAGTTaGCCTAGCCTGCATACTAGC +
Preference number: 3 (lower is better)
Translates to: REIFIVLSVAASSITGGPASCTS*PSLHTS
Trigger: GCTAGTATGCAGGCTAGGCAAACTTGTGCAACTTGC...TGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675717.1
3UTR-3UTR CAA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGCCAGACTTCCAAGAGTaGTTGGGATGTGGGAGGGGA +
Preference number: 3 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWPDFQE*LGCGRG
Trigger: TCCCCTCCCACATCCCAACAACTCTTGGAAGTCTGG...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CAA 90 bp AAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTTTTCTCTTGTCCACTTaGGCCCGGTGTTTATTTCCA +
Preference number: 3 (lower is better)
Translates to: KREIFIVLSVAASSITGGFLLST*ARCLFP
Trigger: TGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAA...ACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
3UTR-3UTR CAA 90 bp CCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTCGAGCTTTGGCTTTGGTTCGAGCTTaGAAGGCTGCAGAGTTATAT +
Preference number: 3 (lower is better)
Translates to: PTSALLSRHLLLALVRALALVRA*KAAELY
Trigger: ATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAGC...CAAAGCTCGAACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
3UTR-3UTR CAA 90 bp TTTGACTGCAAGTGGTACTGCATCCCTGATCCAAGAACCTCCTTAAAGGTGTCATTATCCTCTTTCCTGTaGGTAACAGACAAACCTCTG +
Preference number: 3 (lower is better)
Translates to: FDCKWYCIPDPRTSLKVSLSSFL*VTDKPL
Trigger: CAGAGGTTTGTCTGTTACCAACAGGAAAGAGGATAA...TGACACCTTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674915.1
ENST00000675717.1
3UTR-3UTR CAA 90 bp AATTCATTTGACTGCAAGTGGTACTGCATCCCTGATCCAAGAACCTCCTTAAAGCACAAGAGAGGAGGCTaGGAAGCTTATGGAAATGCA +
Preference number: 3 (lower is better)
Translates to: NSFDCKWYCIPDPRTSLKHKRGG*EAYGNA
Trigger: TGCATTTCCATAAGCTTCCAAGCCTCCTCTCTTGTG...CTTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTCAAATGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675717.1
3UTR GCA 72 bp TACAAACAAGTTCTAGATTCTAAACCTGTTTTCCACTaGACTGTAACTGGGGGATGGGACTCAGCAACAGTG +
Preference number: 3 (lower is better)
Translates to: YKQVLDSKPVFH*TVTGGWDSATV
Trigger: CACTGTTGCTGAGTCCCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR GCA 72 bp CCTTTCGAAACGAGAAATCTTCATCGTTTTAAGCGTTaGAGCATCAAGCATCACTGGGGGTCCAAGTTCAAA +
Preference number: 3 (lower is better)
Translates to: PFETRNLHRFKR*SIKHHWGSKFK
Trigger: TTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTTCGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
3UTR GCA 72 bp TACATATATAGTCAATCCTCCATATCTGGTTGGTTCTaGATCACGGATTCAACCAACCATGGACTCCACTGC +
Preference number: 3 (lower is better)
Translates to: YIYSQSSISGWF*ITDSTNHGLHC
Trigger: GCAGTGGAGTCCATGGTTGGTTGAATCCGTGATGCAGAACCAACCAGATATGGAGGATTGACTATATATGTA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675717.1
3UTR TCA 72 bp GTCAGCAGTAGTGTCCATGCAAGAAGAGAGCTGATATaGAGCACTGTATTAGGAGTGCTGCAAATAACAGTA +
Preference number: 3 (lower is better)
Translates to: VSSSVHARRELI*STVLGVLQITV
Trigger: TACTGTTATTTGCAGCACTCCTAATACAGTGCTTCATATCAGCTCTCTTCTTGCATGGACACTACTGCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675717.1
3UTR-3UTR CAA 90 bp CGAGCTTTGAAGGCTGCAGAGTTATATAAATGCCTTTCGAAACGAGAAATCTTCTTTCTCTTGTCCACTTaGGCCCGGTGTTTATTTCCA +
Preference number: 3 (lower is better)
Translates to: RALKAAELYKCLSKREIFFLLST*ARCLFP
Trigger: TGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAA...GAAGATTTCTCGTTTCGAAAGGCATTTATATAACTCTGCAGCCTTCAAAGCTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
3UTR-3UTR CAA 90 bp CATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTTGTTTCTCTTGTCCACTTaGGCCCGGTGTTTATTTCCA +
Preference number: 3 (lower is better)
Translates to: HQASLGVQVQIHFEGIHLFLLST*ARCLFP
Trigger: TGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAA...CAAATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
3UTR-3UTR CAA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACAAGTCTACGGATTaGAAATGGCATGTTGCTTGC +
Preference number: 3 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSNKSTD*KWHVAC
Trigger: GCAAGCAACATGCCATTTCAAATCCGTAGACTTGTT...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CAA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCAACAAGTCTACGGATTaGAAATGGCATGTTGCTTGC +
Preference number: 3 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDANKSTD*KWHVAC
Trigger: GCAAGCAACATGCCATTTCAAATCCGTAGACTTGTT...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
3UTR-3UTR CAA 90 bp TTGAGAACTGTATACACCACAAGTGTGGGGCAAATACTGAGCTTAAATTATTACCTAACAAGTCTCATTTaGAGCCATAACAAGATGGTG +
Preference number: 3 (lower is better)
Translates to: LRTVYTTSVGQILSLNYYLTSLI*SHNKMV
Trigger: CACCATCTTGTTATGGCTCAAAATGAGACTTGTTAG...GTAATAATTTAAGCTCAGTATTTGCCCCACACTTGTGGTGTATACAGTTCTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR TCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGCGCTGCGGCTGCTCCTaGCCCGCCGCCGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLRCGCS*PAAAST
Trigger: AGTGCTGGCGGCGGCGGGTCAGGAGCAGCCGCAGCG...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403825.8
ENST00000675578.1
CDS-3UTR GCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTCGTGGGACGCCCGGTaGCGCCCAGAGTCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: FSLQYICFPTPHGDLQQESWDAR*RPESEL
Trigger: AAGCTCCGACTCTGGGCGGCACCGGGCGTCCCACGA...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403825.8
ENST00000675578.1
CDS-3UTR GCA 90 bp TACTTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAACGCCGCCGCCAGCACTaGTACCGCGGTGGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: YFSLQYICFPTPHGDLQQRRRQH*YRGGEC
Trigger: ACACTCCCCACCGCGGTAGCAGTGCTGGCGGCGGCG...TTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403825.8
ENST00000675578.1
CDS-3UTR GCA 90 bp CTTTCTCTTGTCCACTTTGGCCCGGTGTTTATTTCCATCTGTTGCCAAGGCCCTCGCCGCCGCCAGCACTaGTACCGCGGTGGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: LSLVHFGPVFISICCQGPRRRQH*YRGGEC
Trigger: ACACTCCCCACCGCGGTAGCAGTGCTGGCGGCGGCG...AGGGCCTTGGCAACAGATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp CTTTCTCTTGTCCACTTTGGCCCGGTGTTTATTTCCATCTGTTGCCAAGGCCCTTCGTGGGACGCCCGGTaGCGCCCAGAGTCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LSLVHFGPVFISICCQGPSWDAR*RPESEL
Trigger: AAGCTCCGACTCTGGGCGGCACCGGGCGTCCCACGA...AGGGCCTTGGCAACAGATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGTGTTCTTCGGCATCGTaGGACGCCCGGTGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRCSSAS*DARCRP
Trigger: TGGGCGGCACCGGGCGTCCCACGATGCCGAAGAACA...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403825.8
ENST00000675578.1
CDS-3UTR GCA 90 bp CTTTCTCTTGTCCACTTTGGCCCGGTGTTTATTTCCATCTGTTGCCAAGGCCCTTTACTCGTGCGTCTGTaGGGCGGGCGGCTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LSLVHFGPVFISICCQGPLLVRL*GGRLRG
Trigger: GCCTCTCAGCCGCCCGCCGCACAGACGCACGAGTAA...AGGGCCTTGGCAACAGATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGGGTAAGAGTGGGCGGTaGCGGCAGCAGAAATCCCCG +
Preference number: 4 (lower is better)
Translates to: FSLQYICFPTPHGDLQQEGKSGR*RQQKSP
Trigger: CGGGGATTTCTGCTGCCGCCACCGCCCACTCTTACC...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403825.8
CDS-3UTR TCA 90 bp CAGCTTAGACCCACCTCAGTTTTCCTAGGCCTTTCTTTATTCTATTCAATGGAACGCTGCGGCTGCTCCTaGCCCGCCGCCGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: QLRPTSVFLGLSLFYSMERCGCS*PAAAST
Trigger: AGTGCTGGCGGCGGCGGGTCAGGAGCAGCCGCAGCG...TTCCATTGAATAGAATAAAGAAAGGCCTAGGAAAACTGAGGTGGGTCTAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR TCA 90 bp CATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTTGCGCTGCGGCTGCTCCTaGCCCGCCGCCGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: HQASLGVQVQIHFEGIHLRCGCS*PAAAST
Trigger: AGTGCTGGCGGCGGCGGGTCAGGAGCAGCCGCAGCG...CAAATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp TCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTTGACTGCAAGTCGCTGCGGCTGCTCCTaGCCCGCCGCCGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: SLGVQVQIHFEGIHLTASRCGCS*PAAAST
Trigger: AGTGCTGGCGGCGGCGGGTCAGGAGCAGCCGCAGCG...ACTTGCAGTCAAATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp AAATGCCTTTCGAAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCCGCTGCGGCTGCTCCTaGCCCGCCGCCGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: KCLSKREIFIVLSVAASSRCGCS*PAAAST
Trigger: AGTGCTGGCGGCGGCGGGTCAGGAGCAGCCGCAGCG...GCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTTCGAAAGGCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp CCGGTGTTTATTTCCATCTGTTGCCAAGGCCCTAAGCATCTGCGTCAAGGACTCTGCACTTTTTACTCGTaGGTCTGTGCGGCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: PVFISICCQGPKHLRQGLCTFYS*VCAAGG
Trigger: GCCGCCCGCCGCACAGACGCACGAGTAAAAAGTGCA...GAGTCCTTGACGCAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAACACCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp GTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATCGCCGCCGCCAGCACTaGTACCGCGGTGGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: VAASSITGGPSSNTFRRNRRRQH*YRGGEC
Trigger: ACACTCCCCACCGCGGTAGCAGTGCTGGCGGCGGCG...ATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp ACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCTGTTCTTCGGCATCGTaGGACGCCCGGTGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: TRNLHRFKRCSIKHHWGSCSSAS*DARCRP
Trigger: TGGGCGGCACCGGGCGTCCCACGATGCCGAAGAACA...GGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGGCACTGCTACCGCGGTaGGGAGTGTTCCGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: FSLQYICFPTPHGDLQQEALLPR*GVFRFL
Trigger: CAAGAAGCGGAACACTCCCCACCGCGGTAGCAGTGC...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403825.8
ENST00000675578.1
CDS-3UTR TCA 90 bp TTCTGTTGGAAAATCCCGTTCCTATTATCCTCTTTCCTGTTGGTAACAGACAAACGCTGCGGCTGCTCCTaGCCCGCCGCCGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: FCWKIPFLLSSFLLVTDKRCGCS*PAAAST
Trigger: AGTGCTGGCGGCGGCGGGTCAGGAGCAGCCGCAGCG...TTTGTCTGTTACCAACAGGAAAGAGGATAATAGGAACGGGATTTTCCAACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674915.1
ENST00000675717.1
CDS-3UTR TCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGAACAATAGGAAGTGCTaGGTCATCCTGCCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: FSLQYICFPTPHGDLQQENNRKC*VILPPG
Trigger: CCCCGGGGGCAGGATGACTCAGCACTTCCTATTGTT...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675578.1
CDS-3UTR GCA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTATGCACTTTTTACTCGTaGGTCTGTGCGGCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: ASLPLTATYSKSIKETSLCTFYS*VCAAGG
Trigger: GCCGCCCGCCGCACAGACGCACGAGTAAAAAGTGCA...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403825.8
ENST00000675578.1
CDS-3UTR CCA 90 bp TTTGACTGCAAGTGGTACTGCATCCCTGATCCAAGAACCTCCTTAAAGGTGTCATGTTCTTCGGCATCGTaGGACGCCCGGTGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: FDCKWYCIPDPRTSLKVSCSSAS*DARCRP
Trigger: TGGGCGGCACCGGGCGTCCCACGATGCCGAAGAACA...TGACACCTTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp TACTTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGCACTGCTACCGCGGTaGGGAGTGTTCCGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: YFSLQYICFPTPHGDLQQALLPR*GVFRFL
Trigger: CAAGAAGCGGAACACTCCCCACCGCGGTAGCAGTGC...TTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403825.8
ENST00000675578.1
CDS-3UTR TCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGTGTGCGGCGGGCGGCTaGGAGGCGAGTCTTCGGCTA +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWCAAGG*EASLRL
Trigger: TAGCCGAAGACTCGCCTCTCAGCCGCCCGCCGCACA...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403825.8
CDS-3UTR TCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCCGCTGCGGCTGCTCCTaGCCCGCCGCCGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDARCGCS*PAAAST
Trigger: AGTGCTGGCGGCGGCGGGTCAGGAGCAGCCGCAGCG...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000403825.8
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp GTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTTCGTGGGACGCCCGGTaGCGCCCAGAGTCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: VLSVAASSITGGPSSNTFSWDAR*RPESEL
Trigger: AAGCTCCGACTCTGGGCGGCACCGGGCGTCCCACGA...AAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGTCGTGGGACGCCCGGTaGCGCCCAGAGTCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWSWDAR*RPESEL
Trigger: AAGCTCCGACTCTGGGCGGCACCGGGCGTCCCACGA...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403825.8
ENST00000675578.1
CDS-3UTR GCA 90 bp ATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTTGACTGCAAGCGCCGCCGCCAGCACTaGTACCGCGGTGGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: ITGGPSSNTFRRNSFDCKRRRQH*YRGGEC
Trigger: ACACTCCCCACCGCGGTAGCAGTGCTGGCGGCGGCG...CTTGCAGTCAAATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AAATGCCTTTCGAAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCCGCCGCCGCCAGCACTaGTACCGCGGTGGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: KCLSKREIFIVLSVAASSRRRQH*YRGGEC
Trigger: ACACTCCCCACCGCGGTAGCAGTGCTGGCGGCGGCG...GCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTTCGAAAGGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp CCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTCGAGCTTTGTGTTCTTCGGCATCGTaGGACGCCCGGTGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: PTSALLSRHLLLALVRALCSSAS*DARCRP
Trigger: TGGGCGGCACCGGGCGTCCCACGATGCCGAAGAACA...CAAAGCTCGAACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp TACTTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAACTCGTCACCCAGGCTaGAGTGGCACAATCACGGCT +
Preference number: 4 (lower is better)
Translates to: YFSLQYICFPTPHGDLQQTRHPG*SGTITA
Trigger: AGCCGTGATTGTGCCACTCCAGCCTGGGTGACGAGT...TTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTAACTCGTCACCCAGGCTaGAGTGGCACAATCACGGCT +
Preference number: 4 (lower is better)
Translates to: ASLPLTATYSKSIKETSLTRHPG*SGTITA
Trigger: AGCCGTGATTGTGCCACTCCAGCCTGGGTGACGAGT...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGCCACTGCACTGTAACTaGGGGATGGGACTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRPLHCN*GMGLSN
Trigger: GTTGCTGAGTCCCATCCCCCAGTTACAGTGCAGTGG...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTTGTGCGGCGGGCGGCTaGGAGGCGAGTCTTCGGCTT +
Preference number: 4 (lower is better)
Translates to: NQCYCSQMLRLATFLAYACAAGG*EASLRL
Trigger: AAGCCGAAGACTCGCCTCTCAGCCGCCCGCCGCACA...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675578.1
CDS-3UTR GCA 90 bp AGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTTCGTGGGACGCCCGGTaGCGCCCAGAGTCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SIKHHWGSKFKYISKEFISWDAR*RPESEL
Trigger: AAGCTCCGACTCTGGGCGGCACCGGGCGTCCCACGA...AATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCCGCCGCCGCCAGCACTaGTACCGCGGTGGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSRRRQH*YRGGEC
Trigger: ACACTCCCCACCGCGGTAGCAGTGCTGGCGGCGGCG...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000403825.8
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CCA 90 bp CCGGTGTTTATTTCCATCTGTTGCCAAGGCCCTAAGCATCTGCGTCAAGGACTCGCGAGGATCAGCCGATaGAGCTGCACTTTTTACTCG +
Preference number: 4 (lower is better)
Translates to: PVFISICCQGPKHLRQGLARISR*SCTFYS
Trigger: CGAGTAAAAAGTGCAGCTCCATCGGCTGATCCTCGC...GAGTCCTTGACGCAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAACACCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp GCTTTCTCTTGTCCACTTTGGCCCGGTGTTTATTTCCATCTGTTGCCAAGGCCCGCGAGGATCAGCCGATaGAGCTGCACTTTTTACTCG +
Preference number: 4 (lower is better)
Translates to: AFSCPLWPGVYFHLLPRPARISR*SCTFYS
Trigger: CGAGTAAAAAGTGCAGCTCCATCGGCTGATCCTCGC...GGGCCTTGGCAACAGATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp GTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTTGTTCTTCGGCATCGTaGGACGCCCGGTGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: VLSVAASSITGGPSSNTFCSSAS*DARCRP
Trigger: TGGGCGGCACCGGGCGTCCCACGATGCCGAAGAACA...AAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGTCACCCAGGCTGGAGTaGCACAATCACGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLSPRLE*HNHGSL
Trigger: CAGTGAGCCGTGATTGTGCCACTCCAGCCTGGGTGA...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGCCATCTCTCGCCCACTaGTCCAACTGGTTATTTTCC +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRPSLAH*SNWLFS
Trigger: GGAAAATAACCAGTTGGATCAGTGGGCGAGAGATGG...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675578.1
CDS-3UTR GCA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTTTACTCGTGCGTCTGTaGGGCGGGCGGCTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: NQCYCSQMLRLATFLAYALLVRL*GGRLRG
Trigger: GCCTCTCAGCCGCCCGCCGCACAGACGCACGAGTAA...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000403825.8
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AAATGCCTTTCGAAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCTTACTCGTGCGTCTGTaGGGCGGGCGGCTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: KCLSKREIFIVLSVAASSLLVRL*GGRLRG
Trigger: GCCTCTCAGCCGCCCGCCGCACAGACGCACGAGTAA...GCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTTCGAAAGGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp CTAGAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTTCGTGGGACGCCCGGTaGCGCCCAGAGTCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LEEFSNICSLISTFASSFSWDAR*RPESEL
Trigger: AAGCTCCGACTCTGGGCGGCACCGGGCGTCCCACGA...AAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGAAGGCCCTAAGCATCTaGGTCAAGGACTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: FSLQYICFPTPHGDLQQEKALSI*VKDSMS
Trigger: AGACATGGAGTCCTTGACGCAGATGCTTAGGGCCTT...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGGACTGCAAGTGGTACTaGATCCCTGATCCAAGAACC +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRDCKWY*IPDPRT
Trigger: GGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTC...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp TACTTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGCGAGGATCAGCCGATaGAGCTGCACTTTTTACTCG +
Preference number: 4 (lower is better)
Translates to: YFSLQYICFPTPHGDLQQARISR*SCTFYS
Trigger: CGAGTAAAAAGTGCAGCTCCATCGGCTGATCCTCGC...TTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403825.8
ENST00000675578.1
CDS-3UTR CCA 90 bp CCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTCGAGCTTTGGCACTGCTACCGCGGTaGGGAGTGTTCCGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PTSALLSRHLLLALVRALALLPR*GVFRFL
Trigger: CAAGAAGCGGAACACTCCCCACCGCGGTAGCAGTGC...CAAAGCTCGAACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTACTCGTCACCCAGGCTaGAGTGGCACAATCACGGCT +
Preference number: 4 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCTRHPG*SGTITA
Trigger: AGCCGTGATTGTGCCACTCCAGCCTGGGTGACGAGT...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGACTGTAACTGGGGGATaGGACTCAGCAACAGTGACT +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRTVTGG*DSATVT
Trigger: AGTCACTGTTGCTGAGTCCCATCCCCCAGTTACAGT...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGACTGTAACTGGGGGATaGGACTCAGCAACAGTGACT +
Preference number: 4 (lower is better)
Translates to: FSLQYICFPTPHGDLQQETVTGG*DSATVT
Trigger: AGTCACTGTTGCTGAGTCCCATCCCCCAGTTACAGT...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGCCACTGCACTGTAACTaGGGGATGGGACTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLPLHCN*GMGLSN
Trigger: GTTGCTGAGTCCCATCCCCCAGTTACAGTGCAGTGG...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGTATGTAGACCTTGAATaGACCAGGAGCCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRYVDLE*TRSQKE
Trigger: CTCCTTCTGGCTCCTGGTTCATTCAAGGTCTACATA...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp GCTTTCTCTTGTCCACTTTGGCCCGGTGTTTATTTCCATCTGTTGCCAAGGCCCATTCCAGGGCCCAGCTaGATACAAAGAACAGATGCT +
Preference number: 4 (lower is better)
Translates to: AFSCPLWPGVYFHLLPRPIPGPS*IQRTDA
Trigger: AGCATCTGTTCTTTGTATTCAGCTGGGCCCTGGAAT...GGGCCTTGGCAACAGATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674887.1
ENST00000675041.1
CDS-3UTR TCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGATTCCAGGGCCCAGCTaGATACAAAGAACAGATGCT +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRIPGPS*IQRTDA
Trigger: AGCATCTGTTCTTTGTATTCAGCTGGGCCCTGGAAT...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGGACATCTCTGAAAACTaGCCGCTGCTTTCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: FSLQYICFPTPHGDLQQEDISEN*PLLSLV
Trigger: GACAAGAGAAAGCAGCGGTCAGTTTTCAGAGATGTC...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGGTGGTACTGCATCCCTaGTCCAAGAACCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRVVLHP*SKNLLK
Trigger: TTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCAC...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACAGCAGAAATCCCCGTaGAGAGCTGTGATCGAAAAC +
Preference number: 4 (lower is better)
Translates to: ASLPLTATYSKSIKETSLQQKSP*RAVIEN
Trigger: GTTTTCGATCACAGCTCTTCACGGGGATTTCTGCTG...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403825.8
CDS-3UTR TCA 90 bp GCTGCTTTCTCTTGTCCACTTTGGCCCGGTGTTTATTTCCATCTGTTGCCAAGGCAGCAGAAATCCCCGTaGAGAGCTGTGATCGAAAAC +
Preference number: 4 (lower is better)
Translates to: AAFSCPLWPGVYFHLLPRQQKSP*RAVIEN
Trigger: GTTTTCGATCACAGCTCTTCACGGGGATTTCTGCTG...CCTTGGCAACAGATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGGTTAAGAGGTTGCAGTaGGCTATGATCACACCACAC +
Preference number: 4 (lower is better)
Translates to: FSLQYICFPTPHGDLQQEVKRLQ*AMITPH
Trigger: GTGTGGTGTGATCATAGCTCACTGCAACCTCTTAAC...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535603.5
CDS-3UTR GCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCTTACTCGTGCGTCTGTaGGGCGGGCGGCTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSLLVRL*GGRLRG
Trigger: GCCTCTCAGCCGCCCGCCGCACAGACGCACGAGTAA...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000403825.8
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp TACTTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAATCAGCCGATGGAGCTaGACTTTTTACTCGTGCGTC +
Preference number: 4 (lower is better)
Translates to: YFSLQYICFPTPHGDLQQISRWS*TFYSCV
Trigger: GACGCACGAGTAAAAAGTGCAGCTCCATCGGCTGAT...TTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403825.8
ENST00000675578.1
CDS-3UTR GCA 90 bp TTCAAGCTTTTCTGGTATAACAAGAGAATGACCATCACCTCTTCTGATACAAAACGCCGCCGCCAGCACTaGTACCGCGGTGGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: FKLFWYNKRMTITSSDTKRRRQH*YRGGEC
Trigger: ACACTCCCCACCGCGGTAGCAGTGCTGGCGGCGGCG...TTTTGTATCAGAAGAGGTGATGGTCATTCTCTTGTTATACCAGAAAAGCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR GCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGGCTGCAGCTGCACGTTaGTCATCACTCTTACCTTTT +
Preference number: 4 (lower is better)
Translates to: FSLQYICFPTPHGDLQQEAAAAR*SSLLPF
Trigger: AAAAGGTAAGAGTGATGAGCAACGTGCAGCTGCAGC...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGCAAGTTTGCCTAGCCTaGATACTAGCTGACCCATCA +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRQVCLA*ILADPS
Trigger: TGATGGGTCAGCTAGTATGCAGGCTAGGCAAACTTG...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp TACTTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGACTGCAAGTGGTACTaGATCCCTGATCCAAGAACC +
Preference number: 4 (lower is better)
Translates to: YFSLQYICFPTPHGDLQQDCKWY*IPDPRT
Trigger: GGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTC...TTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGCTCAAGTTACCCTCTTaGCTCAGCACCCAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRLKLPS*LSTQVD
Trigger: ATCTACTTGGGTGCTGAGGCAAGAGGGTAACTTGAG...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp TACTTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAATCCCTACAGTATATATaGTTCCCTACCCCTCACGGC +
Preference number: 4 (lower is better)
Translates to: YFSLQYICFPTPHGDLQQSLQYI*FPTPHG
Trigger: GCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGA...TTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGAAACCTGTTTTCCACTaGACTGTAACTGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: FSLQYICFPTPHGDLQQEKPVFH*TVTGGW
Trigger: CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTT...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp CGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAGCGAGGATCAGCCGATaGAGCTGCACTTTTTACTCG +
Preference number: 4 (lower is better)
Translates to: REIFIVLSVAASSITGGPARISR*SCTFYS
Trigger: CGAGTAAAAAGTGCAGCTCCATCGGCTGATCCTCGC...TGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp ACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCGCGAGGATCAGCCGATaGAGCTGCACTTTTTACTCG +
Preference number: 4 (lower is better)
Translates to: TRNLHRFKRCSIKHHWGSARISR*SCTFYS
Trigger: CGAGTAAAAAGTGCAGCTCCATCGGCTGATCCTCGC...GGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp AATTCATTTGACTGCAAGTGGTACTGCATCCCTGATCCAAGAACCTCCTTAAAGGCACTGCTACCGCGGTaGGGAGTGTTCCGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: NSFDCKWYCIPDPRTSLKALLPR*GVFRFL
Trigger: CAAGAAGCGGAACACTCCCCACCGCGGTAGCAGTGC...CTTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTCAAATGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGAGAGTTGTTGGGATGTaGGAGGGGAACACTAGTTTG +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRRVVGM*EGNTSL
Trigger: CAAACTAGTGTTCCCCTCCCACATCCCAACAACTCT...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp TACTTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAACTTCCAAGAGTTGTTaGGATGTGGGAGGGGAACAC +
Preference number: 4 (lower is better)
Translates to: YFSLQYICFPTPHGDLQQTSKSC*DVGGEH
Trigger: GTGTTCCCCTCCCACATCCCAACAACTCTTGGAAGT...TTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGCTACTCTGTCCACTCTaGTCTCCTGACCCATTTACA +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRLLCPL*SPDPFT
Trigger: TGTAAATGGGTCAGGAGACCAGAGTGGACAGAGTAG...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675578.1
CDS-3UTR CCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGAGCAGAAATCCTTCATaGCAGGCCTCCGAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLSRNPS*QASEQA
Trigger: TGCTTGCTCGGAGGCCTGCCATGAAGGATTTCTGCT...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675578.1
CDS-3UTR TCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGTCATCACTAAAAGGCTaGACATTTCGATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRSSLKG*TFRCWP
Trigger: TGGCCAGCATCGAAATGTTCAGCCTTTTAGTGATGA...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTAGACATCTCTGAAAACTaGCCGCTGCTTTCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: ASLPLTATYSKSIKETSLDISEN*PLLSLV
Trigger: GACAAGAGAAAGCAGCGGTCAGTTTTCAGAGATGTC...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp CTTTCTCTTGTCCACTTTGGCCCGGTGTTTATTTCCATCTGTTGCCAAGGCCCTGACATCTCTGAAAACTaGCCGCTGCTTTCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: LSLVHFGPVFISICCQGPDISEN*PLLSLV
Trigger: GACAAGAGAAAGCAGCGGTCAGTTTTCAGAGATGTC...AGGGCCTTGGCAACAGATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp CAGCTTAGACCCACCTCAGTTTTCCTAGGCCTTTCTTTATTCTATTCAATGGAATGCACTTTTTACTCGTaGGTCTGTGCGGCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: QLRPTSVFLGLSLFYSMECTFYS*VCAAGG
Trigger: GCCGCCCGCCGCACAGACGCACGAGTAAAAAGTGCA...TTCCATTGAATAGAATAAAGAAAGGCCTAGGAAAACTGAGGTGGGTCTAAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR GCA 90 bp ATTCTCATGTTTACATCATCACAAGAGAGGAGGCTTGGAAGCTTATGGAAATGCTGCACTTTTTACTCGTaGGTCTGTGCGGCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: ILMFTSSQERRLGSLWKCCTFYS*VCAAGG
Trigger: GCCGCCCGCCGCACAGACGCACGAGTAAAAAGTGCA...GCATTTCCATAAGCTTCCAAGCCTCCTCTCTTGTGATGATGTAAACATGAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675717.1
CDS-3UTR GCA 90 bp TGTTTATTTCCATCTGTTGCCAAGGCCCTAAGCATCTGCGTCAAGGACTCCATGATCAGCCGATGGAGCTaGACTTTTTACTCGTGCGTC +
Preference number: 4 (lower is better)
Translates to: CLFPSVAKALSICVKDSMISRWS*TFYSCV
Trigger: GACGCACGAGTAAAAAGTGCAGCTCCATCGGCTGAT...CATGGAGTCCTTGACGCAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp TTCAAGCTTTTCTGGTATAACAAGAGAATGACCATCACCTCTTCTGATACAAAATCGTGGGACGCCCGGTaGCGCCCAGAGTCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: FKLFWYNKRMTITSSDTKSWDAR*RPESEL
Trigger: AAGCTCCGACTCTGGGCGGCACCGGGCGTCCCACGA...TTTTGTATCAGAAGAGGTGATGGTCATTCTCTTGTTATACCAGAAAAGCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR GCA 90 bp GCTGCTTTCTCTTGTCCACTTTGGCCCGGTGTTTATTTCCATCTGTTGCCAAGGCAAGTTTGCCTAGCCTaGATACTAGCTGACCCATCA +
Preference number: 4 (lower is better)
Translates to: AAFSCPLWPGVYFHLLPRQVCLA*ILADPS
Trigger: TGATGGGTCAGCTAGTATGCAGGCTAGGCAAACTTG...CCTTGGCAACAGATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGAACACCAAAGCAAGTTaGACAAGTTTGCCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: FSLQYICFPTPHGDLQQENTKAS*TSLPSL
Trigger: CAGGCTAGGCAAACTTGTGCAACTTGCTTTGGTGTT...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp CGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAAGGCCCTAAGCATCTaGGTCAAGGACTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: REIFIVLSVAASSITGGPKALSI*VKDSMS
Trigger: AGACATGGAGTCCTTGACGCAGATGCTTAGGGCCTT...TGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp CCGGTGTTTATTTCCATCTGTTGCCAAGGCCCTAAGCATCTGCGTCAAGGACTCCTGAAAACTGACCGCTaGTTTCTCTTGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: PVFISICCQGPKHLRQGLLKTDR*FLLSTL
Trigger: CAAAGTGGACAAGAGAAAGCAGCGGTCAGTTTTCAG...GAGTCCTTGACGCAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAACACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp TGTTTATTTCCATCTGTTGCCAAGGCCCTAAGCATCTGCGTCAAGGACTCCATGGACTGCAAGTGGTACTaGATCCCTGATCCAAGAACC +
Preference number: 4 (lower is better)
Translates to: CLFPSVAKALSICVKDSMDCKWY*IPDPRT
Trigger: GGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTC...CATGGAGTCCTTGACGCAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGCATCGTTTTAAGCGTTaGAGCATCAAGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRHRFKR*SIKHHW
Trigger: CCAGTGATGCTTGATGCTGCAACGCTTAAAACGATG...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGAAAGCTTTGTCTCCCTaGCCACCTGGCCTAGTCATT +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLKALSP*PPGLVI
Trigger: AATGACTAGGCCAGGTGGGCAGGGAGACAAAGCTTT...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp TTGAGAACTGTATACACCACAAGTGTGGGGCAAATACTGAGCTTAAATTATTACTGTTCTTCGGCATCGTaGGACGCCCGGTGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: LRTVYTTSVGQILSLNYYCSSAS*DARCRP
Trigger: TGGGCGGCACCGGGCGTCCCACGATGCCGAAGAACA...GTAATAATTTAAGCTCAGTATTTGCCCCACACTTGTGGTGTATACAGTTCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR CCA 90 bp AGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTGCACTGCTACCGCGGTaGGGAGTGTTCCGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SIKHHWGSKFKYISKEFIALLPR*GVFRFL
Trigger: CAAGAAGCGGAACACTCCCCACCGCGGTAGCAGTGC...AATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGTCATTTGACTGCAAGTaGTACTGCATCCCTGATCCA +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRSFDCK*YCIPDP
Trigger: TGGATCAGGGATGCAGTACCACTTGCAGTCAAATGA...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGAGGCTGGTCTCAAACTaGGCTCATGCCATCCTCCCG +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWRLVSN*AHAILP
Trigger: CGGGAGGATGGCATGAGCCCAGTTTGAGACCAGCCT...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTCTATGTTGCCCAGGCTaGTCTCAAACTGGGCTCATG +
Preference number: 4 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCLCCPG*SQTGLM
Trigger: CATGAGCCCAGTTTGAGACCAGCCTGGGCAACATAG...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp ACCGTCCTTATCTGGCTGAAGCAACTGTTAGCTGACACCACCTTTCCAGCACTCGTTACCGTCCTTATCTaGCTGAAGCAACTGTTAGCT +
Preference number: 4 (lower is better)
Translates to: TVLIWLKQLLADTTFPALVTVLI*LKQLLA
Trigger: AGCTAACAGTTGCTTCAGCCAGATAAGGACGGTAAC...GAGTGCTGGAAAGGTGGTGTCAGCTAACAGTTGCTTCAGCCAGATAAGGACGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462155.2
CDS-3UTR TCA 90 bp TACTTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAATCATCACTAAAAGGCTaGACATTTCGATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: YFSLQYICFPTPHGDLQQSSLKG*TFRCWP
Trigger: TGGCCAGCATCGAAATGTTCAGCCTTTTAGTGATGA...TTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTATACTCTAGGTCTTCTTaGGTTCCTTCCTCATCAAGG +
Preference number: 4 (lower is better)
Translates to: ASLPLTATYSKSIKETSLYSRSS*VPSSSR
Trigger: CCTTGATGAGGAAGGAACTCAAGAAGACCTAGAGTA...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGAGCCTGCATACTAGCTaGCCCATCACAAATGATTTT +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRSLHTS*PITNDF
Trigger: AAAATCATTTGTGATGGGTCAGCTAGTATGCAGGCT...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGAGCCTGCATACTAGCTaGCCCATCACAAATGATTTT +
Preference number: 4 (lower is better)
Translates to: FSLQYICFPTPHGDLQQESLHTS*PITNDF
Trigger: AAAATCATTTGTGATGGGTCAGCTAGTATGCAGGCT...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp CCGGTGTTTATTTCCATCTGTTGCCAAGGCCCTAAGCATCTGCGTCAAGGACTCAGCCTGCATACTAGCTaGCCCATCACAAATGATTTT +
Preference number: 4 (lower is better)
Translates to: PVFISICCQGPKHLRQGLSLHTS*PITNDF
Trigger: AAAATCATTTGTGATGGGTCAGCTAGTATGCAGGCT...GAGTCCTTGACGCAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAACACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp GCTTTCTCTTGTCCACTTTGGCCCGGTGTTTATTTCCATCTGTTGCCAAGGCCCAGCCTGCATACTAGCTaGCCCATCACAAATGATTTT +
Preference number: 4 (lower is better)
Translates to: AFSCPLWPGVYFHLLPRPSLHTS*PITNDF
Trigger: AAAATCATTTGTGATGGGTCAGCTAGTATGCAGGCT...GGGCCTTGGCAACAGATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGAGAAGAGAGCTGATATaGAGCACTGTATTAGGAGTG +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRRRELI*STVLGV
Trigger: CACTCCTAATACAGTGCTTCATATCAGCTCTCTTCT...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp GCTTTCTCTTGTCCACTTTGGCCCGGTGTTTATTTCCATCTGTTGCCAAGGCCCAGAAGAGAGCTGATATaGAGCACTGTATTAGGAGTG +
Preference number: 4 (lower is better)
Translates to: AFSCPLWPGVYFHLLPRPRRELI*STVLGV
Trigger: CACTCCTAATACAGTGCTTCATATCAGCTCTCTTCT...GGGCCTTGGCAACAGATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp ACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCGTGGTACTGCATCCCTaGTCCAAGAACCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: TRNLHRFKRCSIKHHWGSVVLHP*SKNLLK
Trigger: TTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCAC...GGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGCTTTGGTTCGAGCTTTaGAGGCTGCAGAGTTATATA +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRLWFEL*RLQSYI
Trigger: TATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAG...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp TTCAAGCTTTTCTGGTATAACAAGAGAATGACCATCACCTCTTCTGATACAAAATTACTCGTGCGTCTGTaGGGCGGGCGGCTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: FKLFWYNKRMTITSSDTKLLVRL*GGRLRG
Trigger: GCCTCTCAGCCGCCCGCCGCACAGACGCACGAGTAA...TTTTGTATCAGAAGAGGTGATGGTCATTCTCTTGTTATACCAGAAAAGCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR GCA 90 bp CTAGAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTTGCACTTTTTACTCGTaGGTCTGTGCGGCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LEEFSNICSLISTFASSFCTFYS*VCAAGG
Trigger: GCCGCCCGCCGCACAGACGCACGAGTAAAAAGTGCA...AAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCTGCACTTTTTACTCGTaGGTCTGTGCGGCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSCTFYS*VCAAGG
Trigger: GCCGCCCGCCGCACAGACGCACGAGTAAAAAGTGCA...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000403825.8
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTATCAGCCGATGGAGCTaGACTTTTTACTCGTGCGTC +
Preference number: 4 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCISRWS*TFYSCV
Trigger: GACGCACGAGTAAAAAGTGCAGCTCCATCGGCTGAT...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403825.8
ENST00000675578.1
CDS-3UTR GCA 90 bp TTTGACTGCAAGTGGTACTGCATCCCTGATCCAAGAACCTCCTTAAAGGTGTCAATCAGCCGATGGAGCTaGACTTTTTACTCGTGCGTC +
Preference number: 4 (lower is better)
Translates to: FDCKWYCIPDPRTSLKVSISRWS*TFYSCV
Trigger: GACGCACGAGTAAAAAGTGCAGCTCCATCGGCTGAT...TGACACCTTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp CATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATCAGCCGATGGAGCTaGACTTTTTACTCGTGCGTC +
Preference number: 4 (lower is better)
Translates to: HRFKRCSIKHHWGSKFKYISRWS*TFYSCV
Trigger: GACGCACGAGTAAAAAGTGCAGCTCCATCGGCTGAT...GTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACAAGTTGCACAAGTTTaGCTAGCCTGCATACTAGCT +
Preference number: 4 (lower is better)
Translates to: ASLPLTATYSKSIKETSLQVAQV*LACILA
Trigger: AGCTAGTATGCAGGCTAGGCAAACTTGTGCAACTTG...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGCAATTCAAAGAGAAGTaGCAAAGATTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FSLQYICFPTPHGDLQQEQFKEK*QRFTSS
Trigger: GCTGCTGGTGAATCTTTGGCACTTCTCTTTGAATTG...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGTTTATTTCCATCTGTTaGCAAGGCCCTAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRFISIC*QGPKHL
Trigger: CAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAA...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTTTATTTCCATCTGTTaGCAAGGCCCTAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: FSLQYICFPTPHGDLQQEFISIC*QGPKHL
Trigger: CAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAA...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACTGAAAACTGACCGCTaGTTTCTCTTGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: ASLPLTATYSKSIKETSLLKTDR*FLLSTL
Trigger: CAAAGTGGACAAGAGAAAGCAGCGGTCAGTTTTCAG...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGACTGCAAGTGGTACTaGATCCCTGATCCAAGAACC +
Preference number: 4 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCDCKWY*IPDPRT
Trigger: GGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTC...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGAGCCACACTGCATGTTaGCAAGCAGAAATATTCTTG +
Preference number: 4 (lower is better)
Translates to: FSLQYICFPTPHGDLQQESHTAC*QAEIFL
Trigger: CAAGAATATTTCTGCTTGGCAACATGCAGTGTGGCT...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGACAATCACGGCTCACTaGAGCTTTGACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWTITAH*SFDLLG
Trigger: GCCCAGGAGGTCAAAGCTGCAGTGAGCCGTGATTGT...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp CCGGTGTTTATTTCCATCTGTTGCCAAGGCCCTAAGCATCTGCGTCAAGGACTCCTCATCAAGGACTTCTaGTCCATCTTCAGCAAAACT +
Preference number: 4 (lower is better)
Translates to: PVFISICCQGPKHLRQGLLIKDF*SIFSKT
Trigger: AGTTTTGCTGAAGATGGACCAGAAGTCCTTGATGAG...GAGTCCTTGACGCAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAACACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGACAAGAGAGGAGGCTTaGAAGCTTATGGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRTREEA*KLMEMH
Trigger: ATGCATTTCCATAAGCTTCCAAGCCTCCTCTCTTGT...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGAGAGTTGTTGGGATGTaGGAGGGGAACACTAGTTTG +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLRVVGM*EGNTSL
Trigger: CAAACTAGTGTTCCCCTCCCACATCCCAACAACTCT...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGCTTGGTAGGGCCTCCTaGGGTTGGCCTTCACAACAA +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWLGRAS*GWPSQQ
Trigger: TTGTTGTGAAGGCCAACCCCAGGAGGCCCTACCAAG...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675578.1
CDS-3UTR CCA 90 bp AAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTGGATTCAACCAACCATaGACTCCACTGCCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: KREIFIVLSVAASSITGGGFNQP*TPLPSG
Trigger: TCCTGAGGGCAGTGGAGTCCATGGTTGGTTGAATCC...ACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674915.1
ENST00000675717.1
CDS-3UTR TCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGTACTCTAGGTCTTCTTaGGTTCCTTCCTCATCAAGG +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLYSRSS*VPSSSR
Trigger: CCTTGATGAGGAAGGAACTCAAGAAGACCTAGAGTA...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTAAGAAGAGAGCTGATATaGAGCACTGTATTAGGAGTG +
Preference number: 4 (lower is better)
Translates to: ASLPLTATYSKSIKETSLRRELI*STVLGV
Trigger: CACTCCTAATACAGTGCTTCATATCAGCTCTCTTCT...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp TTTGACTGCAAGTGGTACTGCATCCCTGATCCAAGAACCTCCTTAAAGGTGTCAGACATCTCTGAAAACTaGCCGCTGCTTTCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: FDCKWYCIPDPRTSLKVSDISEN*PLLSLV
Trigger: GACAAGAGAAAGCAGCGGTCAGTTTTCAGAGATGTC...TGACACCTTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp ACTGAAGTTACCGTCCTTATCTGGCTGAAGCAACTGTTAGCTGACACCACCTTTGTGGTACTGCATCCCTaGTCCAAGAACCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: TEVTVLIWLKQLLADTTFVVLHP*SKNLLK
Trigger: TTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCAC...AAAGGTGGTGTCAGCTAACAGTTGCTTCAGCCAGATAAGGACGGTAACTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462155.2
CDS-3UTR TCA 90 bp TTTGACTGCAAGTGGTACTGCATCCCTGATCCAAGAACCTCCTTAAAGGTGTCAGTGGTACTGCATCCCTaGTCCAAGAACCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: FDCKWYCIPDPRTSLKVSVVLHP*SKNLLK
Trigger: TTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCAC...TGACACCTTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTAACAAGTCTACGGATTTaGAATGGCATGTTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: ASLPLTATYSKSIKETSLTSLRI*NGMLLA
Trigger: TGCAAGCAACATGCCATTTCAAATCCGTAGACTTGT...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp GAAAATCTAGAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTTGCACTTTTTACTCGTaGGTCTGTGCGGCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: ENLEEFSNICSLISTFASCTFYS*VCAAGG
Trigger: GCCGCCCGCCGCACAGACGCACGAGTAAAAAGTGCA...AGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTCTAGATTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp GATTCACCAGCAGCTATTCTCATGTTTACATCATCACAAGAGAGGAGGCTTGGAATCAGCCGATGGAGCTaGACTTTTTACTCGTGCGTC +
Preference number: 4 (lower is better)
Translates to: DSPAAILMFTSSQERRLGISRWS*TFYSCV
Trigger: GACGCACGAGTAAAAAGTGCAGCTCCATCGGCTGAT...TCCAAGCCTCCTCTCTTGTGATGATGTAAACATGAGAATAGCTGCTGGTGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675717.1
CDS-3UTR GCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGGATCGCTATAACCACTaGAATGGCTCATTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: FSLQYICFPTPHGDLQQEDRYNH*NGSLFQ
Trigger: TTGAAACAATGAGCCATTGCAGTGGTTATAGCGATC...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTCCTTCAAGAGCTGCTTaGCTTGTCTTCGCACTCTTA +
Preference number: 4 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCPSRAA*LVFALL
Trigger: TAAGAGTGCGAAGACAAGGCAAGCAGCTCTTGAAGG...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp CATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACCCTTCAAGAGCTGCTTaGCTTGTCTTCGCACTCTTA +
Preference number: 4 (lower is better)
Translates to: HRFKRCSIKHHWGSKFKYPSRAA*LVFALL
Trigger: TAAGAGTGCGAAGACAAGGCAAGCAGCTCTTGAAGG...GTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGAATACCTTCAAGAGCTaGTTGCCTTGTCTTCGCACT +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLNTFKS*LPCLRT
Trigger: AGTGCGAAGACAAGGCAAGCAGCTCTTGAAGGTATT...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp CGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAATACCTTCAAGAGCTaGTTGCCTTGTCTTCGCACT +
Preference number: 4 (lower is better)
Translates to: REIFIVLSVAASSITGGPNTFKS*LPCLRT
Trigger: AGTGCGAAGACAAGGCAAGCAGCTCTTGAAGGTATT...TGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTCAGGCAGCGTTCAATaGTATCAGTTAAAGTCATTC +
Preference number: 4 (lower is better)
Translates to: FSLQYICFPTPHGDLQQESGSVQ*YQLKSF
Trigger: GAATGACTTTAACTGATAGCATTGAACGCTGCCTGA...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp AATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCCAAGTTTGCCTAGCCTaGATACTAGCTGACCCATCA +
Preference number: 4 (lower is better)
Translates to: NLHRFKRCSIKHHWGSKFQVCLA*ILADPS
Trigger: TGATGGGTCAGCTAGTATGCAGGCTAGGCAAACTTG...GAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGCAAGTTGCACAAGTTTaGCTAGCCTGCATACTAGCT +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLQVAQV*LACILA
Trigger: AGCTAGTATGCAGGCTAGGCAAACTTGTGCAACTTG...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp CGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAACACCAAAGCAAGTTaGACAAGTTTGCCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: REIFIVLSVAASSITGGPNTKAS*TSLPSL
Trigger: CAGGCTAGGCAAACTTGTGCAACTTGCTTTGGTGTT...TGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACAATTCAAAGAGAAGTaGCAAAGATTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASLPLTATYSKSIKETSLQFKEK*QRFTSS
Trigger: GCTGCTGGTGAATCTTTGGCACTTCTCTTTGAATTG...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp CTTTCTCTTGTCCACTTTGGCCCGGTGTTTATTTCCATCTGTTGCCAAGGCCCTCAATTCAAAGAGAAGTaGCAAAGATTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LSLVHFGPVFISICCQGPQFKEK*QRFTSS
Trigger: GCTGCTGGTGAATCTTTGGCACTTCTCTTTGAATTG...AGGGCCTTGGCAACAGATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp ATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACAGACTGCAAGTGGTACTaGATCCCTGATCCAAGAACC +
Preference number: 4 (lower is better)
Translates to: IVLSVAASSITGGPSSNTDCKWY*IPDPRT
Trigger: GGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTC...TGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTAAGCCACACTGCATGTTaGCAAGCAGAAATATTCTTG +
Preference number: 4 (lower is better)
Translates to: ASLPLTATYSKSIKETSLSHTAC*QAEIFL
Trigger: CAAGAATATTTCTGCTTGGCAACATGCAGTGTGGCT...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTACAATCACGGCTCACTaGAGCTTTGACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: NQCYCSQMLRLATFLAYATITAH*SFDLLG
Trigger: GCCCAGGAGGTCAAAGCTGCAGTGAGCCGTGATTGT...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTAAACCTGTTTTCCACTaGACTGTAACTGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCKPVFH*TVTGGW
Trigger: CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTT...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGAGGAACATCAAATACTaGGAGGAATTACACACATCC +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRRNIKY*EELHTS
Trigger: GGATGTGTGTAATTCCTCCCAGTATTTGATGTTCCT...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp GAAAATCTAGAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTGCACTGCTACCGCGGTaGGGAGTGTTCCGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: ENLEEFSNICSLISTFASALLPR*GVFRFL
Trigger: CAAGAAGCGGAACACTCCCCACCGCGGTAGCAGTGC...AGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTCTAGATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp TACTTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAACATCTTCAGCAAAACTaGAAGGATCGCTATAACCAC +
Preference number: 4 (lower is better)
Translates to: YFSLQYICFPTPHGDLQQHLQQN*KDRYNH
Trigger: GTGGTTATAGCGATCCTTCCAGTTTTGCTGAAGATG...TTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp TTGTCCACTTTGGCCCGGTGTTTATTTCCATCTGTTGCCAAGGCCCTAAGCATCACAAGAGAGGAGGCTTaGAAGCTTATGGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: LSTLARCLFPSVAKALSITREEA*KLMEMH
Trigger: ATGCATTTCCATAAGCTTCCAAGCCTCCTCTCTTGT...GATGCTTAGGGCCTTGGCAACAGATGGAAATAAACACCGGGCCAAAGTGGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACACTCTCTATTCCTCTaGCCAATTCAAAGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: ASLPLTATYSKSIKETSLHSLFL*PIQREV
Trigger: CACTTCTCTTTGAATTGGCCAGAGGAATAGAGAGTG...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGTTTAATGGTTTCTGTTaGAAAATCCCGTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRFNGFC*KIPFLH
Trigger: GTGGAGGAACGGGATTTTCCAACAGAAACCATTAAA...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAGGCTGGTCTCAAACTaGGCTCATGCCATCCTCCCG +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSRLVSN*AHAILP
Trigger: CGGGAGGATGGCATGAGCCCAGTTTGAGACCAGCCT...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGCTATGTTGCCCAGGCTaGTCTCAAACTGGGCTCATG +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWLCCPG*SQTGLM
Trigger: CATGAGCCCAGTTTGAGACCAGCCTGGGCAACATAG...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGGCAGCTTTGACCTCCTaGGCTCAAGTTACCCTCTTG +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWAALTS*AQVTLL
Trigger: CAAGAGGGTAACTTGAGCCCAGGAGGTCAAAGCTGC...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCTCACCCAGGCTGGAGTaGCACAATCACGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSSPRLE*HNHGSL
Trigger: CAGTGAGCCGTGATTGTGCCACTCCAGCCTGGGTGA...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTAGAGTTGTTGGGATGTaGGAGGGGAACACTAGTTTG +
Preference number: 4 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCRVVGM*EGNTSL
Trigger: CAAACTAGTGTTCCCCTCCCACATCCCAACAACTCT...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp TTTGACTGCAAGTGGTACTGCATCCCTGATCCAAGAACCTCCTTAAAGGTGTCATCATCACTAAAAGGCTaGACATTTCGATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: FDCKWYCIPDPRTSLKVSSSLKG*TFRCWP
Trigger: TGGCCAGCATCGAAATGTTCAGCCTTTTAGTGATGA...TGACACCTTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp CATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACTCATCACTAAAAGGCTaGACATTTCGATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: HRFKRCSIKHHWGSKFKYSSLKG*TFRCWP
Trigger: TGGCCAGCATCGAAATGTTCAGCCTTTTAGTGATGA...GTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTTACTCTAGGTCTTCTTaGGTTCCTTCCTCATCAAGG +
Preference number: 4 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCYSRSS*VPSSSR
Trigger: CCTTGATGAGGAAGGAACTCAAGAAGACCTAGAGTA...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp TACTTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAATTTTCTTCACTTCATTaGTTGGGCATATGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: YFSLQYICFPTPHGDLQQFSSLH*LGIWSA
Trigger: TGCTGACCATATGCCCAATCAATGAAGTGAAGAAAA...TTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGCTTTGGTTCGAGCTTTaGAGGCTGCAGAGTTATATA +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLLWFEL*RLQSYI
Trigger: TATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAG...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp GTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCAGCAGAAATCCCCGTaGAGAGCTGTGATCGAAAAC +
Preference number: 4 (lower is better)
Translates to: VLSVAASSITGGPSSNTFQQKSP*RAVIEN
Trigger: GTTTTCGATCACAGCTCTTCACGGGGATTTCTGCTG...AAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATAGGAGGGAGAGCTGCTTaGGCCCAGGAGTTAAGAGGT +
Preference number: 4 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGIGGRAA*AQELRG
Trigger: ACCTCTTAACTCCTGGGCTCAAGCAGCTCTCCCTCC...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535603.5
CDS-3UTR GCA 90 bp GCTGCTTTCTCTTGTCCACTTTGGCCCGGTGTTTATTTCCATCTGTTGCCAAGGGATCGCTATAACCACTaGAATGGCTCATTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: AAFSCPLWPGVYFHLLPRDRYNH*NGSLFQ
Trigger: TTGAAACAATGAGCCATTGCAGTGGTTATAGCGATC...CCTTGGCAACAGATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp GTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATCCTTCAAGAGCTGCTTaGCTTGTCTTCGCACTCTTA +
Preference number: 4 (lower is better)
Translates to: VAASSITGGPSSNTFRRNPSRAA*LVFALL
Trigger: TAAGAGTGCGAAGACAAGGCAAGCAGCTCTTGAAGG...ATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCCAAGTTGCACAAGTTTaGCTAGCCTGCATACTAGCT +
Preference number: 4 (lower is better)
Translates to: NLHRFKRCSIKHHWGSKFQVAQV*LACILA
Trigger: AGCTAGTATGCAGGCTAGGCAAACTTGTGCAACTTG...GAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAACACCAAAGCAAGTTaGACAAGTTTGCCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: NLHRFKRCSIKHHWGSKFNTKAS*TSLPSL
Trigger: CAGGCTAGGCAAACTTGTGCAACTTGCTTTGGTGTT...GAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGAAGGCCCTAAGCATCTaGGTCAAGGACTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWKALSI*VKDSMS
Trigger: AGACATGGAGTCCTTGACGCAGATGCTTAGGGCCTT...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp GTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTAAGGCCCTAAGCATCTaGGTCAAGGACTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: VLSVAASSITGGPSSNTFKALSI*VKDSMS
Trigger: AGACATGGAGTCCTTGACGCAGATGCTTAGGGCCTT...AAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGTTTATTTCCATCTGTTaGCAAGGCCCTAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLFISIC*QGPKHL
Trigger: CAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAA...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp ACCTTTCCAGCACTCCTGCCATGGTATGCTTCCATATATAAATATCCTGTAGCAGACTGCAAGTGGTACTaGATCCCTGATCCAAGAACC +
Preference number: 4 (lower is better)
Translates to: TFPALLPWYASIYKYPVADCKWY*IPDPRT
Trigger: GGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTC...TGCTACAGGATATTTATATATGGAAGCATACCATGGCAGGAGTGCTGGAAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462155.2
CDS-3UTR GCA 90 bp AATTCATTTGACTGCAAGTGGTACTGCATCCCTGATCCAAGAACCTCCTTAAAGGACTGCAAGTGGTACTaGATCCCTGATCCAAGAACC +
Preference number: 4 (lower is better)
Translates to: NSFDCKWYCIPDPRTSLKDCKWY*IPDPRT
Trigger: GGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTC...CTTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTCAAATGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp ACTGAAGTTACCGTCCTTATCTGGCTGAAGCAACTGTTAGCTGACACCACCTTTCATCGTTTTAAGCGTTaGAGCATCAAGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: TEVTVLIWLKQLLADTTFHRFKR*SIKHHW
Trigger: CCAGTGATGCTTGATGCTGCAACGCTTAAAACGATG...AAAGGTGGTGTCAGCTAACAGTTGCTTCAGCCAGATAAGGACGGTAACTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462155.2
CDS-3UTR GCA 90 bp AATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCCATCGTTTTAAGCGTTaGAGCATCAAGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: NLHRFKRCSIKHHWGSKFHRFKR*SIKHHW
Trigger: CCAGTGATGCTTGATGCTGCAACGCTTAAAACGATG...GAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGAAAGCTTTGTCTCCCTaGCCACCTGGCCTAGTCATT +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWKALSP*PPGLVI
Trigger: AATGACTAGGCCAGGTGGGCAGGGAGACAAAGCTTT...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCACAATCACGGCTCACTaGAGCTTTGACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSTITAH*SFDLLG
Trigger: GCCCAGGAGGTCAAAGCTGCAGTGAGCCGTGATTGT...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGTCCCTACAGTATATATaGTTCCCTACCCCTCACGGC +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWSLQYI*FPTPHG
Trigger: GCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGA...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp TTCAAGCTTTTCTGGTATAACAAGAGAATGACCATCACCTCTTCTGATACAAAAGCACTGCTACCGCGGTaGGGAGTGTTCCGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: FKLFWYNKRMTITSSDTKALLPR*GVFRFL
Trigger: CAAGAAGCGGAACACTCCCCACCGCGGTAGCAGTGC...TTTTGTATCAGAAGAGGTGATGGTCATTCTCTTGTTATACCAGAAAAGCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR CCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGCTCATCAAGGACTTCTaGTCCATCTTCAGCAAAACT +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLLIKDF*SIFSKT
Trigger: AGTTTTGCTGAAGATGGACCAGAAGTCCTTGATGAG...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp TGTTTATTTCCATCTGTTGCCAAGGCCCTAAGCATCTGCGTCAAGGACTCCATGCTCATCAAGGACTTCTaGTCCATCTTCAGCAAAACT +
Preference number: 4 (lower is better)
Translates to: CLFPSVAKALSICVKDSMLIKDF*SIFSKT
Trigger: AGTTTTGCTGAAGATGGACCAGAAGTCCTTGATGAG...CATGGAGTCCTTGACGCAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGACAAGAGAGGAGGCTTaGAAGCTTATGGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLTREEA*KLMEMH
Trigger: ATGCATTTCCATAAGCTTCCAAGCCTCCTCTCTTGT...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGCACTCTCTATTCCTCTaGCCAATTCAAAGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLHSLFL*PIQREV
Trigger: CACTTCTCTTTGAATTGGCCAGAGGAATAGAGAGTG...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp ACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCCACTCTCTATTCCTCTaGCCAATTCAAAGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: TRNLHRFKRCSIKHHWGSHSLFL*PIQREV
Trigger: CACTTCTCTTTGAATTGGCCAGAGGAATAGAGAGTG...GGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675717.1
CDS-3UTR CCA 90 bp TGTTTATTTCCATCTGTTGCCAAGGCCCTAAGCATCTGCGTCAAGGACTCCATGTTCTCTTGTCCACTTTaGCCCGGTGTTTATTTCCAT +
Preference number: 4 (lower is better)
Translates to: CLFPSVAKALSICVKDSMFSCPL*PGVYFH
Trigger: ATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAA...CATGGAGTCCTTGACGCAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp TACTTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAATTTAATGGTTTCTGTTaGAAAATCCCGTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: YFSLQYICFPTPHGDLQQFNGFC*KIPFLH
Trigger: GTGGAGGAACGGGATTTTCCAACAGAAACCATTAAA...TTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp CTTTCTCTTGTCCACTTTGGCCCGGTGTTTATTTCCATCTGTTGCCAAGGCCCTTTTAATGGTTTCTGTTaGAAAATCCCGTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LSLVHFGPVFISICCQGPFNGFC*KIPFLH
Trigger: GTGGAGGAACGGGATTTTCCAACAGAAACCATTAAA...AGGGCCTTGGCAACAGATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674887.1
ENST00000675041.1
CDS-3UTR CCA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTTCATTTGACTGCAAGTaGTACTGCATCCCTGATCCA +
Preference number: 4 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCSFDCK*YCIPDP
Trigger: TGGATCAGGGATGCAGTACCACTTGCAGTCAAATGA...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp AATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCTCATTTGACTGCAAGTaGTACTGCATCCCTGATCCA +
Preference number: 4 (lower is better)
Translates to: NLHRFKRCSIKHHWGSKFSFDCK*YCIPDP
Trigger: TGGATCAGGGATGCAGTACCACTTGCAGTCAAATGA...GAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCAGGCTGGTCTCAAACTaGGCTCATGCCATCCTCCCG +
Preference number: 4 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDARLVSN*AHAILP
Trigger: CGGGAGGATGGCATGAGCCCAGTTTGAGACCAGCCT...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTGCAGCTTTGACCTCCTaGGCTCAAGTTACCCTCTTG +
Preference number: 4 (lower is better)
Translates to: NQCYCSQMLRLATFLAYAAALTS*AQVTLL
Trigger: CAAGAGGGTAACTTGAGCCCAGGAGGTCAAAGCTGC...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATCACCCAGGCTGGAGTaGCACAATCACGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGISPRLE*HNHGSL
Trigger: CAGTGAGCCGTGATTGTGCCACTCCAGCCTGGGTGA...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCTCACCCAGGCTGGAGTaGCACAATCACGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDASPRLE*HNHGSL
Trigger: CAGTGAGCCGTGATTGTGCCACTCCAGCCTGGGTGA...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGACTGTAACTGGGGGATaGGACTCAGCAACAGTGACT +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWTVTGG*DSATVT
Trigger: AGTCACTGTTGCTGAGTCCCATCCCCCAGTTACAGT...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGTATGTAGACCTTGAATaGACCAGGAGCCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWYVDLE*TRSQKE
Trigger: CTCCTTCTGGCTCCTGGTTCATTCAAGGTCTACATA...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp CCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTCGAGCTTTGTACTCTAGGTCTTCTTaGGTTCCTTCCTCATCAAGG +
Preference number: 4 (lower is better)
Translates to: PTSALLSRHLLLALVRALYSRSS*VPSSSR
Trigger: CCTTGATGAGGAAGGAACTCAAGAAGACCTAGAGTA...CAAAGCTCGAACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGATTCCAGGGCCCAGCTaGATACAAAGAACAGATGCT +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWIPGPS*IQRTDA
Trigger: AGCATCTGTTCTTTGTATTCAGCTGGGCCCTGGAAT...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp AATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAGAAGAGAGCTGATATaGAGCACTGTATTAGGAGTG +
Preference number: 4 (lower is better)
Translates to: NLHRFKRCSIKHHWGSKFRRELI*STVLGV
Trigger: CACTCCTAATACAGTGCTTCATATCAGCTCTCTTCT...GAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp CATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACAGAAGAGAGCTGATATaGAGCACTGTATTAGGAGTG +
Preference number: 4 (lower is better)
Translates to: HRFKRCSIKHHWGSKFKYRRELI*STVLGV
Trigger: CACTCCTAATACAGTGCTTCATATCAGCTCTCTTCT...GTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGTTTTCTTCACTTCATTaGTTGGGCATATGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLFSSLH*LGIWSA
Trigger: TGCTGACCATATGCCCAATCAATGAAGTGAAGAAAA...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp AATTCATTTGACTGCAAGTGGTACTGCATCCCTGATCCAAGAACCTCCTTAAAGGTGGTACTGCATCCCTaGTCCAAGAACCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: NSFDCKWYCIPDPRTSLKVVLHP*SKNLLK
Trigger: TTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCAC...CTTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTCAAATGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp AATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCCTTTGGTTCGAGCTTTaGAGGCTGCAGAGTTATATA +
Preference number: 4 (lower is better)
Translates to: NLHRFKRCSIKHHWGSKFLWFEL*RLQSYI
Trigger: TATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAG...GAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp ATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTTGACTGCAAGCAGCAGAAATCCCCGTaGAGAGCTGTGATCGAAAAC +
Preference number: 4 (lower is better)
Translates to: ITGGPSSNTFRRNSFDCKQQKSP*RAVIEN
Trigger: GTTTTCGATCACAGCTCTTCACGGGGATTTCTGCTG...CTTGCAGTCAAATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTATGGAACATAACCAAGTaGCAACATACAAACAAGTTC +
Preference number: 4 (lower is better)
Translates to: ASLPLTATYSKSIKETSLWNITK*QHTNKF
Trigger: GAACTTGTTTGTATGTTGTCACTTGGTTATGTTCCA...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCGGTTGCAGTGAGCTATaGTCACACCACACCGCACTC +
Preference number: 4 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDAGCSEL*SHHTAL
Trigger: GAGTGCGGTGTGGTGTGATCATAGCTCACTGCAACC...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535603.5
CDS-3UTR TCA 90 bp GGTTTTTATTGGACTGAAGTTACCGTCCTTATCTGGCTGAAGCAACTGTTAGCTTGCCACTATGATGACTaGCTTGCAAACACTCCAGAC +
Preference number: 4 (lower is better)
Translates to: GFYWTEVTVLIWLKQLLACHYDD*LANTPD
Trigger: GTCTGGAGTGTTTGCAAGTCAGTCATCATAGTGGCA...AGCTAACAGTTGCTTCAGCCAGATAAGGACGGTAACTTCAGTCCAATAAAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462155.2
CDS-3UTR GCA 90 bp ACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCGATCGCTATAACCACTaGAATGGCTCATTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: TRNLHRFKRCSIKHHWGSDRYNH*NGSLFQ
Trigger: TTGAAACAATGAGCCATTGCAGTGGTTATAGCGATC...GGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGGATCGCTATAACCACTaGAATGGCTCATTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLDRYNH*NGSLFQ
Trigger: TTGAAACAATGAGCCATTGCAGTGGTTATAGCGATC...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp AATTCATTTGACTGCAAGTGGTACTGCATCCCTGATCCAAGAACCTCCTTAAAGCCTTCAAGAGCTGCTTaGCTTGTCTTCGCACTCTTA +
Preference number: 4 (lower is better)
Translates to: NSFDCKWYCIPDPRTSLKPSRAA*LVFALL
Trigger: TAAGAGTGCGAAGACAAGGCAAGCAGCTCTTGAAGG...CTTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTCAAATGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGTCAGGCAGCGTTCAATaGTATCAGTTAAAGTCATTC +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLSGSVQ*YQLKSF
Trigger: GAATGACTTTAACTGATAGCATTGAACGCTGCCTGA...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGGCTGCAGCTGCACGTTaGTCATCACTCTTACCTTTT +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWAAAAR*SSLLPF
Trigger: AAAAGGTAAGAGTGATGAGCAACGTGCAGCTGCAGC...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGCAAGTTTGCCTAGCCTaGATACTAGCTGACCCATCA +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWQVCLA*ILADPS
Trigger: TGATGGGTCAGCTAGTATGCAGGCTAGGCAAACTTG...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp GTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCAAGTTTGCCTAGCCTaGATACTAGCTGACCCATCA +
Preference number: 4 (lower is better)
Translates to: VLSVAASSITGGPSSNTFQVCLA*ILADPS
Trigger: TGATGGGTCAGCTAGTATGCAGGCTAGGCAAACTTG...AAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCAAGTTGCACAAGTTTaGCTAGCCTGCATACTAGCT +
Preference number: 4 (lower is better)
Translates to: KREIFIVLSVAASSITGGQVAQV*LACILA
Trigger: AGCTAGTATGCAGGCTAGGCAAACTTGTGCAACTTG...ACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp CTATACAACCTCAGGCAGCACTACATTAGCAATCTGTCTCAGGCTCCTCTTATACAAGTTGCACAAGTTTaGCTAGCCTGCATACTAGCT +
Preference number: 4 (lower is better)
Translates to: LYNLRQHYISNLSQAPLIQVAQV*LACILA
Trigger: AGCTAGTATGCAGGCTAGGCAAACTTGTGCAACTTG...TATAAGAGGAGCCTGAGACAGATTGCTAATGTAGTGCTGCCTGAGGTTGTATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675041.1
CDS-3UTR GCA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTAGGAAGCTTATGGAAATaGATCTCAAGCTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: ASLPLTATYSKSIKETSLGSLWK*ISSFFF
Trigger: GAAGAAAAAGCTTGAGATGCATTTCCATAAGCTTCC...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp GCTGCTTTCTCTTGTCCACTTTGGCCCGGTGTTTATTTCCATCTGTTGCCAAGGGGAAGCTTATGGAAATaGATCTCAAGCTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: AAFSCPLWPGVYFHLLPRGSLWK*ISSFFF
Trigger: GAAGAAAAAGCTTGAGATGCATTTCCATAAGCTTCC...CCTTGGCAACAGATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAAGCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AAATGCCTTTCGAAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCAAGGCCCTAAGCATCTaGGTCAAGGACTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: KCLSKREIFIVLSVAASSKALSI*VKDSMS
Trigger: AGACATGGAGTCCTTGACGCAGATGCTTAGGGCCTT...GCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTTCGAAAGGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTAAGGCCCTAAGCATCTaGGTCAAGGACTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: SIKHHWGSKFKYISKEFIKALSI*VKDSMS
Trigger: AGACATGGAGTCCTTGACGCAGATGCTTAGGGCCTT...AATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTTTTATTTCCATCTGTTaGCAAGGCCCTAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCFISIC*QGPKHL
Trigger: CAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAA...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp AAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCTGAAAACTGACCGCTaGTTTCTCTTGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: KREIFIVLSVAASSITGGLKTDR*FLLSTL
Trigger: CAAAGTGGACAAGAGAAAGCAGCGGTCAGTTTTCAG...ACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp ATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACACATCGTTTTAAGCGTTaGAGCATCAAGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: IVLSVAASSITGGPSSNTHRFKR*SIKHHW
Trigger: CCAGTGATGCTTGATGCTGCAACGCTTAAAACGATG...TGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp CCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTCGAGCTTTGCATCGTTTTAAGCGTTaGAGCATCAAGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: PTSALLSRHLLLALVRALHRFKR*SIKHHW
Trigger: CCAGTGATGCTTGATGCTGCAACGCTTAAAACGATG...CAAAGCTCGAACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGCTCAAGTTACCCTCTTaGCTCAGCACCCAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWLKLPS*LSTQVD
Trigger: ATCTACTTGGGTGCTGAGGCAAGAGGGTAACTTGAG...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGAAACCTGTTTTCCACTaGACTGTAACTGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWKPVFH*TVTGGW
Trigger: CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTT...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGGAAGAAACTACCATTTaGAATCTCTTTTCCATGGTT +
Preference number: 4 (lower is better)
Translates to: DFHLEGAPDFQELLGCGREETTI*NLFSMV
Trigger: AACCATGGAAAAGAGATTGCAAATGGTAGTTTCTTC...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp ACCACCTTTCCAGCACTCCTGCCATGGTATGCTTCCATATATAAATATCCTGTACCTTTCCAGCACTCCTaGCATGGTATGCTTCCATAT +
Preference number: 4 (lower is better)
Translates to: TTFPALLPWYASIYKYPVPFQHS*HGMLPY
Trigger: ATATGGAAGCATACCATGGCAGGAGTGCTGGAAAGG...TACAGGATATTTATATATGGAAGCATACCATGGCAGGAGTGCTGGAAAGGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462155.2
CDS-3UTR CCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGAGGAACATCAAATACTaGGAGGAATTACACACATCC +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLRNIKY*EELHTS
Trigger: GGATGTGTGTAATTCCTCCCAGTATTTGATGTTCCT...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGAGGCTTGGAAGCTTATaGAAATGCATCTCAAGCTTT +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLRLGSL*KCISSF
Trigger: AAAGCTTGAGATGCATTTCCATAAGCTTCCAAGCCT...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTTTCTCTTGTCCACTTTaGCCCGGTGTTTATTTCCAT +
Preference number: 4 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCFSCPL*PGVYFH
Trigger: ATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAA...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGTTTAATGGTTTCTGTTaGAAAATCCCGTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLFNGFC*KIPFLH
Trigger: GTGGAGGAACGGGATTTTCCAACAGAAACCATTAAA...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCGCAGCTTTGACCTCCTaGGCTCAAGTTACCCTCTTG +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSAALTS*AQVTLL
Trigger: CAAGAGGGTAACTTGAGCCCAGGAGGTCAAAGCTGC...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTATCTACGGATTTGAAATaGCATGTTGCTTGCACTATA +
Preference number: 4 (lower is better)
Translates to: ASLPLTATYSKSIKETSLSTDLK*HVACTI
Trigger: TATAGTGCAAGCAACATGCCATTTCAAATCCGTAGA...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGAGAGTTGTTGGGATGTaGGAGGGGAACACTAGTTTG +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWRVVGM*EGNTSL
Trigger: CAAACTAGTGTTCCCCTCCCACATCCCAACAACTCT...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCCCACTGCACTGTAACTaGGGGATGGGACTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDAPLHCN*GMGLSN
Trigger: GTTGCTGAGTCCCATCCCCCAGTTACAGTGCAGTGG...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp AAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTGGATTCAACCAACCATaGACTCCACTGCCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: KNSPTSALLSRHLLLALVGFNQP*TPLPSG
Trigger: TCCTGAGGGCAGTGGAGTCCATGGTTGGTTGAATCC...AACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674915.1
ENST00000675717.1
CDS-3UTR TCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGCTTGTGATCGGCTTCTaGGAATTAAATGGGATGTCC +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWLVIGF*ELNGMS
Trigger: GGACATCCCATTTAATTCTCAGAAGCCGATCACAAG...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGTCATCACTAAAAGGCTaGACATTTCGATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWSSLKG*TFRCWP
Trigger: TGGCCAGCATCGAAATGTTCAGCCTTTTAGTGATGA...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTATTCCAGGGCCCAGCTaGATACAAAGAACAGATGCT +
Preference number: 4 (lower is better)
Translates to: NQCYCSQMLRLATFLAYAIPGPS*IQRTDA
Trigger: AGCATCTGTTCTTTGTATTCAGCTGGGCCCTGGAAT...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
CDS-3UTR TCA 90 bp AGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTATTCCAGGGCCCAGCTaGATACAAAGAACAGATGCT +
Preference number: 4 (lower is better)
Translates to: SIKHHWGSKFKYISKEFIIPGPS*IQRTDA
Trigger: AGCATCTGTTCTTTGTATTCAGCTGGGCCCTGGAAT...AATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
CDS-3UTR TCA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTGACATCTCTGAAAACTaGCCGCTGCTTTCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: NQCYCSQMLRLATFLAYADISEN*PLLSLV
Trigger: GACAAGAGAAAGCAGCGGTCAGTTTTCAGAGATGTC...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR TCA 90 bp AAATGCCTTTCGAAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCGACATCTCTGAAAACTaGCCGCTGCTTTCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: KCLSKREIFIVLSVAASSDISEN*PLLSLV
Trigger: GACAAGAGAAAGCAGCGGTCAGTTTTCAGAGATGTC...GCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTTCGAAAGGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp CATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTTGGACATCTCTGAAAACTaGCCGCTGCTTTCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: HQASLGVQVQIHFEGIHLDISEN*PLLSLV
Trigger: GACAAGAGAAAGCAGCGGTCAGTTTTCAGAGATGTC...CAAATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp AGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTGTGGTACTGCATCCCTaGTCCAAGAACCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: SIKHHWGSKFKYISKEFIVVLHP*SKNLLK
Trigger: TTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCAC...AATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp CCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTCGAGCTTTGCTTTGGTTCGAGCTTTaGAGGCTGCAGAGTTATATA +
Preference number: 4 (lower is better)
Translates to: PTSALLSRHLLLALVRALLWFEL*RLQSYI
Trigger: TATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAG...CAAAGCTCGAACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTCCCCGTGAAGAGCTGTaGTCGAAAACGATACATGTT +
Preference number: 4 (lower is better)
Translates to: NQCYCSQMLRLATFLAYAPREEL*SKTIHV
Trigger: AACATGTATCGTTTTCGATCACAGCTCTTCACGGGG...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000403825.8
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp ATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTTGACTGCAAGCCCCGTGAAGAGCTGTaGTCGAAAACGATACATGTT +
Preference number: 4 (lower is better)
Translates to: ITGGPSSNTFRRNSFDCKPREEL*SKTIHV
Trigger: AACATGTATCGTTTTCGATCACAGCTCTTCACGGGG...CTTGCAGTCAAATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp GAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTCCCCGTGAAGAGCTGTaGTCGAAAACGATACATGTT +
Preference number: 4 (lower is better)
Translates to: EEFSNICSLISTFASSFGPREEL*SKTIHV
Trigger: AACATGTATCGTTTTCGATCACAGCTCTTCACGGGG...ACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp CTAGAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTCAGCAGAAATCCCCGTaGAGAGCTGTGATCGAAAAC +
Preference number: 4 (lower is better)
Translates to: LEEFSNICSLISTFASSFQQKSP*RAVIEN
Trigger: GTTTTCGATCACAGCTCTTCACGGGGATTTCTGCTG...AAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGATCGCTATAACCACTaGAATGGCTCATTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCDRYNH*NGSLFQ
Trigger: TTGAAACAATGAGCCATTGCAGTGGTTATAGCGATC...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp CATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACGATCGCTATAACCACTaGAATGGCTCATTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: HRFKRCSIKHHWGSKFKYDRYNH*NGSLFQ
Trigger: TTGAAACAATGAGCCATTGCAGTGGTTATAGCGATC...GTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp CTAGCTTTGGTTCGAGCTTTGAAGGCTGCAGAGTTATATAAATGCCTTTCGAAACCTTCAAGAGCTGCTTaGCTTGTCTTCGCACTCTTA +
Preference number: 4 (lower is better)
Translates to: LALVRALKAAELYKCLSKPSRAA*LVFALL
Trigger: TAAGAGTGCGAAGACAAGGCAAGCAGCTCTTGAAGG...TTTCGAAAGGCATTTATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGAATACCTTCAAGAGCTaGTTGCCTTGTCTTCGCACT +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWNTFKS*LPCLRT
Trigger: AGTGCGAAGACAAGGCAAGCAGCTCTTGAAGGTATT...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp AATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCTCAGGCAGCGTTCAATaGTATCAGTTAAAGTCATTC +
Preference number: 4 (lower is better)
Translates to: NLHRFKRCSIKHHWGSKFSGSVQ*YQLKSF
Trigger: GAATGACTTTAACTGATAGCATTGAACGCTGCCTGA...GAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp CTAGCTTTGGTTCGAGCTTTGAAGGCTGCAGAGTTATATAAATGCCTTTCGAAAGCTGCAGCTGCACGTTaGTCATCACTCTTACCTTTT +
Preference number: 4 (lower is better)
Translates to: LALVRALKAAELYKCLSKAAAAR*SSLLPF
Trigger: AAAAGGTAAGAGTGATGAGCAACGTGCAGCTGCAGC...TTTCGAAAGGCATTTATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
CDS-3UTR GCA 90 bp TCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTTGACTGCAAGTGCTGCAGCTGCACGTTaGTCATCACTCTTACCTTTT +
Preference number: 4 (lower is better)
Translates to: SLGVQVQIHFEGIHLTASAAAAR*SSLLPF
Trigger: AAAAGGTAAGAGTGATGAGCAACGTGCAGCTGCAGC...ACTTGCAGTCAAATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
CDS-3UTR GCA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTGCTGCAGCTGCACGTTaGTCATCACTCTTACCTTTT +
Preference number: 4 (lower is better)
Translates to: NQCYCSQMLRLATFLAYAAAAAR*SSLLPF
Trigger: AAAAGGTAAGAGTGATGAGCAACGTGCAGCTGCAGC...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
CDS-3UTR GCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGCAAGTTGCACAAGTTTaGCTAGCCTGCATACTAGCT +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWQVAQV*LACILA
Trigger: AGCTAGTATGCAGGCTAGGCAAACTTGTGCAACTTG...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGGGAAGCTTATGGAAATaGATCTCAAGCTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLGSLWK*ISSFFF
Trigger: GAAGAAAAAGCTTGAGATGCATTTCCATAAGCTTCC...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp TGTTTATTTCCATCTGTTGCCAAGGCCCTAAGCATCTGCGTCAAGGACTCCATGGGAAGCTTATGGAAATaGATCTCAAGCTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: CLFPSVAKALSICVKDSMGSLWK*ISSFFF
Trigger: GAAGAAAAAGCTTGAGATGCATTTCCATAAGCTTCC...CATGGAGTCCTTGACGCAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAAGGCCCTAAGCATCTaGGTCAAGGACTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSKALSI*VKDSMS
Trigger: AGACATGGAGTCCTTGACGCAGATGCTTAGGGCCTT...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGCTGAAAACTGACCGCTaGTTTCTCTTGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWLKTDR*FLLSTL
Trigger: CAAAGTGGACAAGAGAAAGCAGCGGTCAGTTTTCAG...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp TTCGAAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGCTGAAAACTGACCGCTaGTTTCTCTTGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: FETRNLHRFKRCSIKHHWLKTDR*FLLSTL
Trigger: CAAAGTGGACAAGAGAAAGCAGCGGTCAGTTTTCAG...CCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTTCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGCATCGTTTTAAGCGTTaGAGCATCAAGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWHRFKR*SIKHHW
Trigger: CCAGTGATGCTTGATGCTGCAACGCTTAAAACGATG...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp TTCGAAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGCATCGTTTTAAGCGTTaGAGCATCAAGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: FETRNLHRFKRCSIKHHWHRFKR*SIKHHW
Trigger: CCAGTGATGCTTGATGCTGCAACGCTTAAAACGATG...CCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTTCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTCTCAAGTTACCCTCTTaGCTCAGCACCCAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: NQCYCSQMLRLATFLAYALKLPS*LSTQVD
Trigger: ATCTACTTGGGTGCTGAGGCAAGAGGGTAACTTGAG...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTAGAAGAAACTACCATTTaGAATCTCTTTTCCATGGTT +
Preference number: 4 (lower is better)
Translates to: ASLPLTATYSKSIKETSLEETTI*NLFSMV
Trigger: AACCATGGAAAAGAGATTGCAAATGGTAGTTTCTTC...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGCTTCTGAGAATTAAATaGGATGTCCACGTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLLLRIK*DVHVKF
Trigger: GAACTTTACGTGGACATCCCATTTAATTCTCAGAAG...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp ATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACACTCATCAAGGACTTCTaGTCCATCTTCAGCAAAACT +
Preference number: 4 (lower is better)
Translates to: IVLSVAASSITGGPSSNTLIKDF*SIFSKT
Trigger: AGTTTTGCTGAAGATGGACCAGAAGTCCTTGATGAG...TGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTAGGCTTGGAAGCTTATaGAAATGCATCTCAAGCTTT +
Preference number: 4 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCRLGSL*KCISSF
Trigger: AAAGCTTGAGATGCATTTCCATAAGCTTCCAAGCCT...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp CCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTCGAGCTTTGCACTCTCTATTCCTCTaGCCAATTCAAAGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: PTSALLSRHLLLALVRALHSLFL*PIQREV
Trigger: CACTTCTCTTTGAATTGGCCAGAGGAATAGAGAGTG...CAAAGCTCGAACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675717.1
CDS-3UTR CCA 90 bp ATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTCTCTTGTCCACTTTaGCCCGGTGTTTATTTCCAT +
Preference number: 4 (lower is better)
Translates to: IVLSVAASSITGGPSSNTFSCPL*PGVYFH
Trigger: ATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAA...TGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp GTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTTCTCTTGTCCACTTTaGCCCGGTGTTTATTTCCAT +
Preference number: 4 (lower is better)
Translates to: VAASSITGGPSSNTFRRNFSCPL*PGVYFH
Trigger: ATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAA...ATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGTCATTTGACTGCAAGTaGTACTGCATCCCTGATCCA +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWSFDCK*YCIPDP
Trigger: TGGATCAGGGATGCAGTACCACTTGCAGTCAAATGA...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp ACCACCTTTCCAGCACTCCTGCCATGGTATGCTTCCATATATAAATATCCTGTATCATTTGACTGCAAGTaGTACTGCATCCCTGATCCA +
Preference number: 4 (lower is better)
Translates to: TTFPALLPWYASIYKYPVSFDCK*YCIPDP
Trigger: TGGATCAGGGATGCAGTACCACTTGCAGTCAAATGA...TACAGGATATTTATATATGGAAGCATACCATGGCAGGAGTGCTGGAAAGGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462155.2
CDS-3UTR CCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATACTATGTTGCCCAGGCTaGTCTCAAACTGGGCTCATG +
Preference number: 4 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGILCCPG*SQTGLM
Trigger: CATGAGCCCAGTTTGAGACCAGCCTGGGCAACATAG...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGTCTACGGATTTGAAATaGCATGTTGCTTGCACTATA +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLSTDLK*HVACTI
Trigger: TATAGTGCAAGCAACATGCCATTTCAAATCCGTAGA...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCACTGTAACTGGGGGATaGGACTCAGCAACAGTGACT +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSTVTGG*DSATVT
Trigger: AGTCACTGTTGCTGAGTCCCATCCCCCAGTTACAGT...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp TTCAAGCTTTTCTGGTATAACAAGAGAATGACCATCACCTCTTCTGATACAAAAGTGGTCTCCAACTCCTaGCTTCCAGCAATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: FKLFWYNKRMTITSSDTKVVSNS*LPAILP
Trigger: TGGGAGGATTGCTGGAAGCCAGGAGTTGGAGACCAC...TTTTGTATCAGAAGAGGTGATGGTCATTCTCTTGTTATACCAGAAAAGCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429071.5
3UTR CAA 72 bp TGTTGGAAAATCCCGTTCCTATTATCCTCTTTCCTGTaGGTAACAGACAAACCTCTGTCCCTCCACAATTCA +
Preference number: 4 (lower is better)
Translates to: CWKIPFLLSSFL*VTDKPLSLHNS
Trigger: TGAATTGTGGAGGGACAGAGGTTTGTCTGTTACCAACAGGAAAGAGGATAATAGGAACGGGATTTTCCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674915.1
ENST00000675717.1
CDS-3UTR TCA 90 bp CAGCTTAGACCCACCTCAGTTTTCCTAGGCCTTTCTTTATTCTATTCAATGGAATCATCACTAAAAGGCTaGACATTTCGATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QLRPTSVFLGLSLFYSMESSLKG*TFRCWP
Trigger: TGGCCAGCATCGAAATGTTCAGCCTTTTAGTGATGA...TTCCATTGAATAGAATAAAGAAAGGCCTAGGAAAACTGAGGTGGGTCTAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR TCA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTTACTCTAGGTCTTCTTaGGTTCCTTCCTCATCAAGG +
Preference number: 4 (lower is better)
Translates to: NQCYCSQMLRLATFLAYAYSRSS*VPSSSR
Trigger: CCTTGATGAGGAAGGAACTCAAGAAGACCTAGAGTA...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR TCA 90 bp ATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTTGACTGCAAGTACTCTAGGTCTTCTTaGGTTCCTTCCTCATCAAGG +
Preference number: 4 (lower is better)
Translates to: ITGGPSSNTFRRNSFDCKYSRSS*VPSSSR
Trigger: CCTTGATGAGGAAGGAACTCAAGAAGACCTAGAGTA...CTTGCAGTCAAATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp AAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTATTCCAGGGCCCAGCTaGATACAAAGAACAGATGCT +
Preference number: 4 (lower is better)
Translates to: KNSPTSALLSRHLLLALVIPGPS*IQRTDA
Trigger: AGCATCTGTTCTTTGTATTCAGCTGGGCCCTGGAAT...AACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
CDS-3UTR TCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGAGAAGAGAGCTGATATaGAGCACTGTATTAGGAGTG +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWRRELI*STVLGV
Trigger: CACTCCTAATACAGTGCTTCATATCAGCTCTCTTCT...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCCCCCGTGAAGAGCTGTaGTCGAAAACGATACATGTT +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSPREEL*SKTIHV
Trigger: AACATGTATCGTTTTCGATCACAGCTCTTCACGGGG...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000403825.8
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp TTGAGAACTGTATACACCACAAGTGTGGGGCAAATACTGAGCTTAAATTATTACCAGCAGAAATCCCCGTaGAGAGCTGTGATCGAAAAC +
Preference number: 4 (lower is better)
Translates to: LRTVYTTSVGQILSLNYYQQKSP*RAVIEN
Trigger: GTTTTCGATCACAGCTCTTCACGGGGATTTCTGCTG...GTAATAATTTAAGCTCAGTATTTGCCCCACACTTGTGGTGTATACAGTTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR TCA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTTGGAACATAACCAAGTaGCAACATACAAACAAGTTC +
Preference number: 4 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCWNITK*QHTNKF
Trigger: GAACTTGTTTGTATGTTGTCACTTGGTTATGTTCCA...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp TTGAGAACTGTATACACCACAAGTGTGGGGCAAATACTGAGCTTAAATTATTACCCACAATTACAGATGTaGACCACCATGCCGAGTCAC +
Preference number: 4 (lower is better)
Translates to: LRTVYTTSVGQILSLNYYPQLQM*TTMPSH
Trigger: GTGACTCGGCATGGTGGTTCACATCTGTAATTGTGG...GTAATAATTTAAGCTCAGTATTTGCCCCACACTTGTGGTGTATACAGTTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR TCA 90 bp TTTCCAGCACTCCTGCCATGGTATGCTTCCATATATAAATATCCTGTAGCAGGCAGGTTTTTATTGGACTaGAGTTACCGTCCTTATCTG +
Preference number: 4 (lower is better)
Translates to: FPALLPWYASIYKYPVAGRFLLD*SYRPYL
Trigger: CAGATAAGGACGGTAACTTCAGTCCAATAAAAACCT...GCCTGCTACAGGATATTTATATATGGAAGCATACCATGGCAGGAGTGCTGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462155.2
CDS-3UTR GCA 90 bp TTGAGAACTGTATACACCACAAGTGTGGGGCAAATACTGAGCTTAAATTATTACATCAGCCGATGGAGCTaGACTTTTTACTCGTGCGTC +
Preference number: 4 (lower is better)
Translates to: LRTVYTTSVGQILSLNYYISRWS*TFYSCV
Trigger: GACGCACGAGTAAAAAGTGCAGCTCCATCGGCTGAT...GTAATAATTTAAGCTCAGTATTTGCCCCACACTTGTGGTGTATACAGTTCTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR GCA 90 bp AAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTGATCGCTATAACCACTaGAATGGCTCATTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: KREIFIVLSVAASSITGGDRYNH*NGSLFQ
Trigger: TTGAAACAATGAGCCATTGCAGTGGTTATAGCGATC...ACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCCCTTCAAGAGCTGCTTaGCTTGTCTTCGCACTCTTA +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSPSRAA*LVFALL
Trigger: TAAGAGTGCGAAGACAAGGCAAGCAGCTCTTGAAGG...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTAATACCTTCAAGAGCTaGTTGCCTTGTCTTCGCACT +
Preference number: 4 (lower is better)
Translates to: NQCYCSQMLRLATFLAYANTFKS*LPCLRT
Trigger: AGTGCGAAGACAAGGCAAGCAGCTCTTGAAGGTATT...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGAAGCTTATGGAAATaGATCTCAAGCTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCGSLWK*ISSFFF
Trigger: GAAGAAAAAGCTTGAGATGCATTTCCATAAGCTTCC...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGCAATTCAAAGAGAAGTaGCAAAGATTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWQFKEK*QRFTSS
Trigger: GCTGCTGGTGAATCTTTGGCACTTCTCTTTGAATTG...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCAAGGCCCTAAGCATCTaGGTCAAGGACTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDAKALSI*VKDSMS
Trigger: AGACATGGAGTCCTTGACGCAGATGCTTAGGGCCTT...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AATTCATTTGACTGCAAGTGGTACTGCATCCCTGATCCAAGAACCTCCTTAAAGTTTATTTCCATCTGTTaGCAAGGCCCTAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: NSFDCKWYCIPDPRTSLKFISIC*QGPKHL
Trigger: CAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAA...CTTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTCAAATGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTCTGAAAACTGACCGCTaGTTTCTCTTGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: NQCYCSQMLRLATFLAYALKTDR*FLLSTL
Trigger: CAAAGTGGACAAGAGAAAGCAGCGGTCAGTTTTCAG...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp ATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTTGACTGCAAGCTGAAAACTGACCGCTaGTTTCTCTTGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: ITGGPSSNTFRRNSFDCKLKTDR*FLLSTL
Trigger: CAAAGTGGACAAGAGAAAGCAGCGGTCAGTTTTCAG...CTTGCAGTCAAATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATAGACTGCAAGTGGTACTaGATCCCTGATCCAAGAACC +
Preference number: 4 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGIDCKWY*IPDPRT
Trigger: GGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTC...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTCATCGTTTTAAGCGTTaGAGCATCAAGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: NQCYCSQMLRLATFLAYAHRFKR*SIKHHW
Trigger: CCAGTGATGCTTGATGCTGCAACGCTTAAAACGATG...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCAAAGCTTTGTCTCCCTaGCCACCTGGCCTAGTCATT +
Preference number: 4 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDAKALSP*PPGLVI
Trigger: AATGACTAGGCCAGGTGGGCAGGGAGACAAAGCTTT...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATCCCTACAGTATATATaGTTCCCTACCCCTCACGGC +
Preference number: 4 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGISLQYI*FPTPHG
Trigger: GCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGA...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGGAAGAAACTACCATTTaGAATCTCTTTTCCATGGTT +
Preference number: 4 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLEETTI*NLFSMV
Trigger: AACCATGGAAAAGAGATTGCAAATGGTAGTTTCTTC...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTCTTCTGAGAATTAAATaGGATGTCCACGTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCLLRIK*DVHVKF
Trigger: GAACTTTACGTGGACATCCCATTTAATTCTCAGAAG...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp TTCAAGCTTTTCTGGTATAACAAGAGAATGACCATCACCTCTTCTGATACAAAAGCGAGGATCAGCCGATaGAGCTGCACTTTTTACTCG +
Preference number: 4 (lower is better)
Translates to: FKLFWYNKRMTITSSDTKARISR*SCTFYS
Trigger: CGAGTAAAAAGTGCAGCTCCATCGGCTGATCCTCGC...TTTTGTATCAGAAGAGGTGATGGTCATTCTCTTGTTATACCAGAAAAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR CCA 90 bp GTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCATCTTCAGCAAAACTaGAAGGATCGCTATAACCAC +
Preference number: 4 (lower is better)
Translates to: VLSVAASSITGGPSSNTFHLQQN*KDRYNH
Trigger: GTGGTTATAGCGATCCTTCCAGTTTTGCTGAAGATG...AAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp AATTCATTTGACTGCAAGTGGTACTGCATCCCTGATCCAAGAACCTCCTTAAAGCATCTTCAGCAAAACTaGAAGGATCGCTATAACCAC +
Preference number: 4 (lower is better)
Translates to: NSFDCKWYCIPDPRTSLKHLQQN*KDRYNH
Trigger: GTGGTTATAGCGATCCTTCCAGTTTTGCTGAAGATG...CTTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTCAAATGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGCACTCTCTATTCCTCTaGCCAATTCAAAGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWHSLFL*PIQREV
Trigger: CACTTCTCTTTGAATTGGCCAGAGGAATAGAGAGTG...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCACTTCCAAGAGTTGTTaGGATGTGGGAGGGGAACAC +
Preference number: 4 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDATSKSC*DVGGEH
Trigger: GTGTTCCCCTCCCACATCCCAACAACTCTTGGAAGT...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATAACTTCCAAGAGTTGTTaGGATGTGGGAGGGGAACAC +
Preference number: 4 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGITSKSC*DVGGEH
Trigger: GTGTTCCCCTCCCACATCCCAACAACTCTTGGAAGT...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCCTTGTGATCGGCTTCTaGGAATTAAATGGGATGTCC +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSLVIGF*ELNGMS
Trigger: GGACATCCCATTTAATTCTCAGAAGCCGATCACAAG...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp CTAGAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTTCATCACTAAAAGGCTaGACATTTCGATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LEEFSNICSLISTFASSFSSLKG*TFRCWP
Trigger: TGGCCAGCATCGAAATGTTCAGCCTTTTAGTGATGA...AAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp TTCTGTTGGAAAATCCCGTTCCTATTATCCTCTTTCCTGTTGGTAACAGACAAATCATCACTAAAAGGCTaGACATTTCGATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: FCWKIPFLLSSFLLVTDKSSLKG*TFRCWP
Trigger: TGGCCAGCATCGAAATGTTCAGCCTTTTAGTGATGA...TTTGTCTGTTACCAACAGGAAAGAGGATAATAGGAACGGGATTTTCCAACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674915.1
ENST00000675717.1
CDS-3UTR TCA 90 bp AAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTTACTCTAGGTCTTCTTaGGTTCCTTCCTCATCAAGG +
Preference number: 4 (lower is better)
Translates to: KNSPTSALLSRHLLLALVYSRSS*VPSSSR
Trigger: CCTTGATGAGGAAGGAACTCAAGAAGACCTAGAGTA...AACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCTACTCTAGGTCTTCTTaGGTTCCTTCCTCATCAAGG +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSYSRSS*VPSSSR
Trigger: CCTTGATGAGGAAGGAACTCAAGAAGACCTAGAGTA...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR TCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCATTCCAGGGCCCAGCTaGATACAAAGAACAGATGCT +
Preference number: 4 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDAIPGPS*IQRTDA
Trigger: AGCATCTGTTCTTTGTATTCAGCTGGGCCCTGGAAT...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
CDS-3UTR TCA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTAGCCTGCATACTAGCTaGCCCATCACAAATGATTTT +
Preference number: 4 (lower is better)
Translates to: NQCYCSQMLRLATFLAYASLHTS*PITNDF
Trigger: AAAATCATTTGTGATGGGTCAGCTAGTATGCAGGCT...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR TCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGTTTTCTTCACTTCATTaGTTGGGCATATGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWFSSLH*LGIWSA
Trigger: TGCTGACCATATGCCCAATCAATGAAGTGAAGAAAA...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp TTCGAAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGTTTTCTTCACTTCATTaGTTGGGCATATGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: FETRNLHRFKRCSIKHHWFSSLH*LGIWSA
Trigger: TGCTGACCATATGCCCAATCAATGAAGTGAAGAAAA...CCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTTCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp GTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTTTTTCTTCACTTCATTaGTTGGGCATATGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: VLSVAASSITGGPSSNTFFSSLH*LGIWSA
Trigger: TGCTGACCATATGCCCAATCAATGAAGTGAAGAAAA...AAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAAC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCGTGGTACTGCATCCCTaGTCCAAGAACCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDAVVLHP*SKNLLK
Trigger: TTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCAC...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR TCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATAGTGGTACTGCATCCCTaGTCCAAGAACCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGIVVLHP*SKNLLK
Trigger: TTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCAC...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR TCA 90 bp GAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTCTTTGGTTCGAGCTTTaGAGGCTGCAGAGTTATATA +
Preference number: 4 (lower is better)
Translates to: EEFSNICSLISTFASSFGLWFEL*RLQSYI
Trigger: TATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAG...ACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp AAAGGTACATATAAATTAACTCTTGAGAACTGTATACACCACAAGTGTGGGGCACCCCGTGAAGAGCTGTaGTCGAAAACGATACATGTT +
Preference number: 4 (lower is better)
Translates to: KGTYKLTLENCIHHKCGAPREEL*SKTIHV
Trigger: AACATGTATCGTTTTCGATCACAGCTCTTCACGGGG...TGCCCCACACTTGTGGTGTATACAGTTCTCAAGAGTTAATTTATATGTACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR TCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATACCCCGTGAAGAGCTGTaGTCGAAAACGATACATGTT +
Preference number: 4 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGIPREEL*SKTIHV
Trigger: AACATGTATCGTTTTCGATCACAGCTCTTCACGGGG...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000403825.8
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp GGTACATATAAATTAACTCTTGAGAACTGTATACACCACAAGTGTGGGGCAAATCCTTCAAGAGCTGCTTaGCTTGTCTTCGCACTCTTA +
Preference number: 4 (lower is better)
Translates to: GTYKLTLENCIHHKCGANPSRAA*LVFALL
Trigger: TAAGAGTGCGAAGACAAGGCAAGCAGCTCTTGAAGG...ATTTGCCCCACACTTGTGGTGTATACAGTTCTCAAGAGTTAATTTATATGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR GCA 90 bp AAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTAATACCTTCAAGAGCTaGTTGCCTTGTCTTCGCACT +
Preference number: 4 (lower is better)
Translates to: KNSPTSALLSRHLLLALVNTFKS*LPCLRT
Trigger: AGTGCGAAGACAAGGCAAGCAGCTCTTGAAGGTATT...AACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGTCAGGCAGCGTTCAATaGTATCAGTTAAAGTCATTC +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWSGSVQ*YQLKSF
Trigger: GAATGACTTTAACTGATAGCATTGAACGCTGCCTGA...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp GTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTTCAGGCAGCGTTCAATaGTATCAGTTAAAGTCATTC +
Preference number: 4 (lower is better)
Translates to: VLSVAASSITGGPSSNTFSGSVQ*YQLKSF
Trigger: GAATGACTTTAACTGATAGCATTGAACGCTGCCTGA...AAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATAGCTGCAGCTGCACGTTaGTCATCACTCTTACCTTTT +
Preference number: 4 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGIAAAAR*SSLLPF
Trigger: AAAAGGTAAGAGTGATGAGCAACGTGCAGCTGCAGC...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
CDS-3UTR GCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATACAAGTTTGCCTAGCCTaGATACTAGCTGACCCATCA +
Preference number: 4 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGIQVCLA*ILADPS
Trigger: TGATGGGTCAGCTAGTATGCAGGCTAGGCAAACTTG...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCCAAGTTTGCCTAGCCTaGATACTAGCTGACCCATCA +
Preference number: 4 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDAQVCLA*ILADPS
Trigger: TGATGGGTCAGCTAGTATGCAGGCTAGGCAAACTTG...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCCAAGTTGCACAAGTTTaGCTAGCCTGCATACTAGCT +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSQVAQV*LACILA
Trigger: AGCTAGTATGCAGGCTAGGCAAACTTGTGCAACTTG...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp CTAGAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTCAAGTTGCACAAGTTTaGCTAGCCTGCATACTAGCT +
Preference number: 4 (lower is better)
Translates to: LEEFSNICSLISTFASSFQVAQV*LACILA
Trigger: AGCTAGTATGCAGGCTAGGCAAACTTGTGCAACTTG...AAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACACCAAAGCAAGTTaGACAAGTTTGCCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSNTKAS*TSLPSL
Trigger: CAGGCTAGGCAAACTTGTGCAACTTGCTTTGGTGTT...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp GAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTCAATTCAAAGAGAAGTaGCAAAGATTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: EEFSNICSLISTFASSFGQFKEK*QRFTSS
Trigger: GCTGCTGGTGAATCTTTGGCACTTCTCTTTGAATTG...ACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp CTAGCTTTGGTTCGAGCTTTGAAGGCTGCAGAGTTATATAAATGCCTTTCGAAACAATTCAAAGAGAAGTaGCAAAGATTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LALVRALKAAELYKCLSKQFKEK*QRFTSS
Trigger: GCTGCTGGTGAATCTTTGGCACTTCTCTTTGAATTG...TTTCGAAAGGCATTTATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAGCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AAATGCCTTTCGAAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCCAATTCAAAGAGAAGTaGCAAAGATTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KCLSKREIFIVLSVAASSQFKEK*QRFTSS
Trigger: GCTGCTGGTGAATCTTTGGCACTTCTCTTTGAATTG...GCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTTCGAAAGGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp CATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTTGTTTATTTCCATCTGTTaGCAAGGCCCTAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: HQASLGVQVQIHFEGIHLFISIC*QGPKHL
Trigger: CAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAA...CAAATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp TCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTTGACTGCAAGTTTTATTTCCATCTGTTaGCAAGGCCCTAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: SLGVQVQIHFEGIHLTASFISIC*QGPKHL
Trigger: CAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAA...ACTTGCAGTCAAATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp TTTTTCTTCACTTCATTGATTGGGCATATGGTCAGCAGTAGTGTCCATGCAAGATTTATTTCCATCTGTTaGCAAGGCCCTAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: FFFTSLIGHMVSSSVHARFISIC*QGPKHL
Trigger: CAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAA...TCTTGCATGGACACTACTGCTGACCATATGCCCAATCAATGAAGTGAAGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675717.1
CDS-3UTR GCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCCATCGTTTTAAGCGTTaGAGCATCAAGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSHRFKR*SIKHHW
Trigger: CCAGTGATGCTTGATGCTGCAACGCTTAAAACGATG...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCAAACCTGTTTTCCACTaGACTGTAACTGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDAKPVFH*TVTGGW
Trigger: CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTT...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp CAGCTTAGACCCACCTCAGTTTTCCTAGGCCTTTCTTTATTCTATTCAATGGAACTCATCAAGGACTTCTaGTCCATCTTCAGCAAAACT +
Preference number: 4 (lower is better)
Translates to: QLRPTSVFLGLSLFYSMELIKDF*SIFSKT
Trigger: AGTTTTGCTGAAGATGGACCAGAAGTCCTTGATGAG...TTCCATTGAATAGAATAAAGAAAGGCCTAGGAAAACTGAGGTGGGTCTAAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR CCA 90 bp CGAGCTTTGAAGGCTGCAGAGTTATATAAATGCCTTTCGAAACGAGAAATCTTCCTCATCAAGGACTTCTaGTCCATCTTCAGCAAAACT +
Preference number: 4 (lower is better)
Translates to: RALKAAELYKCLSKREIFLIKDF*SIFSKT
Trigger: AGTTTTGCTGAAGATGGACCAGAAGTCCTTGATGAG...GAAGATTTCTCGTTTCGAAAGGCATTTATATAACTCTGCAGCCTTCAAAGCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp TTCGAAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGAGGCTTGGAAGCTTATaGAAATGCATCTCAAGCTTT +
Preference number: 4 (lower is better)
Translates to: FETRNLHRFKRCSIKHHWRLGSL*KCISSF
Trigger: AAAGCTTGAGATGCATTTCCATAAGCTTCCAAGCCT...CCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTTCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp CGAGCTTTGAAGGCTGCAGAGTTATATAAATGCCTTTCGAAACGAGAAATCTTCACAAGAGAGGAGGCTTaGAAGCTTATGGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: RALKAAELYKCLSKREIFTREEA*KLMEMH
Trigger: ATGCATTTCCATAAGCTTCCAAGCCTCCTCTCTTGT...GAAGATTTCTCGTTTCGAAAGGCATTTATATAACTCTGCAGCCTTCAAAGCTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp GAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTACAAGAGAGGAGGCTTaGAAGCTTATGGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: EEFSNICSLISTFASSFGTREEA*KLMEMH
Trigger: ATGCATTTCCATAAGCTTCCAAGCCTCCTCTCTTGT...ACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp GAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTCACTCTCTATTCCTCTaGCCAATTCAAAGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: EEFSNICSLISTFASSFGHSLFL*PIQREV
Trigger: CACTTCTCTTTGAATTGGCCAGAGGAATAGAGAGTG...ACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675717.1
CDS-3UTR CCA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTTTCTCTTGTCCACTTTaGCCCGGTGTTTATTTCCAT +
Preference number: 4 (lower is better)
Translates to: NQCYCSQMLRLATFLAYAFSCPL*PGVYFH
Trigger: ATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAA...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CCA 90 bp ACCACCTTTCCAGCACTCCTGCCATGGTATGCTTCCATATATAAATATCCTGTATTTAATGGTTTCTGTTaGAAAATCCCGTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: TTFPALLPWYASIYKYPVFNGFC*KIPFLH
Trigger: GTGGAGGAACGGGATTTTCCAACAGAAACCATTAAA...TACAGGATATTTATATATGGAAGCATACCATGGCAGGAGTGCTGGAAAGGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462155.2
CDS-3UTR CCA 90 bp TTCGAAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGTTTAATGGTTTCTGTTaGAAAATCCCGTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: FETRNLHRFKRCSIKHHWFNGFC*KIPFLH
Trigger: GTGGAGGAACGGGATTTTCCAACAGAAACCATTAAA...CCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTTCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674887.1
ENST00000675041.1
CDS-3UTR CCA 90 bp AAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTTCATTTGACTGCAAGTaGTACTGCATCCCTGATCCA +
Preference number: 4 (lower is better)
Translates to: KNSPTSALLSRHLLLALVSFDCK*YCIPDP
Trigger: TGGATCAGGGATGCAGTACCACTTGCAGTCAAATGA...AACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCTCATTTGACTGCAAGTaGTACTGCATCCCTGATCCA +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSSFDCK*YCIPDP
Trigger: TGGATCAGGGATGCAGTACCACTTGCAGTCAAATGA...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CCA 90 bp GGTACATATAAATTAACTCTTGAGAACTGTATACACCACAAGTGTGGGGCAAATCTCTGTCGCCCAAGCTaGAATGCAGTGGTACAAAAA +
Preference number: 4 (lower is better)
Translates to: GTYKLTLENCIHHKCGANLCRPS*NAVVQK
Trigger: TTTTTGTACCACTGCATTCCAGCTTGGGCGACAGAG...ATTTGCCCCACACTTGTGGTGTATACAGTTCTCAAGAGTTAATTTATATGTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR TCA 90 bp CTAGAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTAGAAGAGAGCTGATATaGAGCACTGTATTAGGAGTG +
Preference number: 4 (lower is better)
Translates to: LEEFSNICSLISTFASSFRRELI*STVLGV
Trigger: CACTCCTAATACAGTGCTTCATATCAGCTCTCTTCT...AAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp CATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTTGTTTTCTTCACTTCATTaGTTGGGCATATGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: HQASLGVQVQIHFEGIHLFSSLH*LGIWSA
Trigger: TGCTGACCATATGCCCAATCAATGAAGTGAAGAAAA...CAAATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTTTTTCTTCACTTCATTaGTTGGGCATATGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: NQCYCSQMLRLATFLAYAFSSLH*LGIWSA
Trigger: TGCTGACCATATGCCCAATCAATGAAGTGAAGAAAA...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR TCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCCTTTGGTTCGAGCTTTaGAGGCTGCAGAGTTATATA +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSLWFEL*RLQSYI
Trigger: TATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAG...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR TCA 90 bp AAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTCTTTGGTTCGAGCTTTaGAGGCTGCAGAGTTATATA +
Preference number: 4 (lower is better)
Translates to: KNSPTSALLSRHLLLALVLWFEL*RLQSYI
Trigger: TATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAG...AACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCACAAGTCTACGGATTTaGAATGGCATGTTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSTSLRI*NGMLLA
Trigger: TGCAAGCAACATGCCATTTCAAATCCGTAGACTTGT...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGTGGAACATAACCAAGTaGCAACATACAAACAAGTTC +
Preference number: 4 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWWNITK*QHTNKF
Trigger: GAACTTGTTTGTATGTTGTCACTTGGTTATGTTCCA...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp CAGCTTAGACCCACCTCAGTTTTCCTAGGCCTTTCTTTATTCTATTCAATGGAAGGTATAACAAGAGAATaGCCATCACCTCTTCTGATA +
Preference number: 4 (lower is better)
Translates to: QLRPTSVFLGLSLFYSMEGITRE*PSPLLI
Trigger: TATCAGAAGAGGTGATGGTCATTCTCTTGTTATACC...TTCCATTGAATAGAATAAAGAAAGGCCTAGGAAAACTGAGGTGGGTCTAAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR GCA 90 bp GGTACATATAAATTAACTCTTGAGAACTGTATACACCACAAGTGTGGGGCAAATAATACCTTCAAGAGCTaGTTGCCTTGTCTTCGCACT +
Preference number: 4 (lower is better)
Translates to: GTYKLTLENCIHHKCGANNTFKS*LPCLRT
Trigger: AGTGCGAAGACAAGGCAAGCAGCTCTTGAAGGTATT...ATTTGCCCCACACTTGTGGTGTATACAGTTCTCAAGAGTTAATTTATATGTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR GCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCAATACCTTCAAGAGCTaGTTGCCTTGTCTTCGCACT +
Preference number: 4 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDANTFKS*LPCLRT
Trigger: AGTGCGAAGACAAGGCAAGCAGCTCTTGAAGGTATT...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp GAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTCAGGCAGCGTTCAATaGTATCAGTTAAAGTCATTC +
Preference number: 4 (lower is better)
Translates to: EEFSNICSLISTFASSFGSGSVQ*YQLKSF
Trigger: GAATGACTTTAACTGATAGCATTGAACGCTGCCTGA...ACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp GAAAATCTAGAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAACACCAAAGCAAGTTaGACAAGTTTGCCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: ENLEEFSNICSLISTFASNTKAS*TSLPSL
Trigger: CAGGCTAGGCAAACTTGTGCAACTTGCTTTGGTGTT...AGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTCTAGATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATAAACACCAAAGCAAGTTaGACAAGTTTGCCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGINTKAS*TSLPSL
Trigger: CAGGCTAGGCAAACTTGTGCAACTTGCTTTGGTGTT...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AATTCATTTGACTGCAAGTGGTACTGCATCCCTGATCCAAGAACCTCCTTAAAGGGAAGCTTATGGAAATaGATCTCAAGCTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: NSFDCKWYCIPDPRTSLKGSLWK*ISSFFF
Trigger: GAAGAAAAAGCTTGAGATGCATTTCCATAAGCTTCC...CTTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTCAAATGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCCAATTCAAAGAGAAGTaGCAAAGATTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSQFKEK*QRFTSS
Trigger: GCTGCTGGTGAATCTTTGGCACTTCTCTTTGAATTG...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATACTGAAAACTGACCGCTaGTTTCTCTTGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGILKTDR*FLLSTL
Trigger: CAAAGTGGACAAGAGAAAGCAGCGGTCAGTTTTCAG...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAGCCACACTGCATGTTaGCAAGCAGAAATATTCTTG +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSSHTAC*QAEIFL
Trigger: CAAGAATATTTCTGCTTGGCAACATGCAGTGTGGCT...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR GCA 90 bp GGTACATATAAATTAACTCTTGAGAACTGTATACACCACAAGTGTGGGGCAAATCTCGGTCTCCCAAAGTaGCACAATTACAGATGTGAA +
Preference number: 4 (lower is better)
Translates to: GTYKLTLENCIHHKCGANLGLPK*HNYRCE
Trigger: TTCACATCTGTAATTGTGGCACTTTGGGAGACCGAG...ATTTGCCCCACACTTGTGGTGTATACAGTTCTCAAGAGTTAATTTATATGTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR CCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCCATCTTCAGCAAAACTaGAAGGATCGCTATAACCAC +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSHLQQN*KDRYNH
Trigger: GTGGTTATAGCGATCCTTCCAGTTTTGCTGAAGATG...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CCA 90 bp CTAGAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTCATCTTCAGCAAAACTaGAAGGATCGCTATAACCAC +
Preference number: 4 (lower is better)
Translates to: LEEFSNICSLISTFASSFHLQQN*KDRYNH
Trigger: GTGGTTATAGCGATCCTTCCAGTTTTGCTGAAGATG...AAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp CATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTTGAGGCTTGGAAGCTTATaGAAATGCATCTCAAGCTTT +
Preference number: 4 (lower is better)
Translates to: HQASLGVQVQIHFEGIHLRLGSL*KCISSF
Trigger: AAAGCTTGAGATGCATTTCCATAAGCTTCCAAGCCT...CAAATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCACAAGAGAGGAGGCTTaGAAGCTTATGGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSTREEA*KLMEMH
Trigger: ATGCATTTCCATAAGCTTCCAAGCCTCCTCTCTTGT...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CCA 90 bp CTAGAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTACAAGAGAGGAGGCTTaGAAGCTTATGGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: LEEFSNICSLISTFASSFTREEA*KLMEMH
Trigger: ATGCATTTCCATAAGCTTCCAAGCCTCCTCTCTTGT...AAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp CTAGAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTTTCTCTTGTCCACTTTaGCCCGGTGTTTATTTCCAT +
Preference number: 4 (lower is better)
Translates to: LEEFSNICSLISTFASSFFSCPL*PGVYFH
Trigger: ATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAA...AAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp CATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTTGAACTCTCTATTCCTCTaGCCAATTCAAAGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: HQASLGVQVQIHFEGIHLNSLFL*PIQREV
Trigger: CACTTCTCTTTGAATTGGCCAGAGGAATAGAGAGTT...CAAATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675041.1
3UTR CAA 72 bp GTGAACCACCATGCCGAGTCACAAGTCTTTTTAAATTaGGTGGTTCCTAAATCTAGTAAGCCTACTAACACT +
Preference number: 4 (lower is better)
Translates to: VNHHAESQVFLN*VVPKSSKPTNT
Trigger: AGTGTTAGTAGGCTTACTAGATTTAGGAACCACCAAATTTAAAAAGACTTGTGACTCGGCATGGTGGTTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR TCA 90 bp TTCAAGCTTTTCTGGTATAACAAGAGAATGACCATCACCTCTTCTGATACAAAATACTCTAGGTCTTCTTaGGTTCCTTCCTCATCAAGG +
Preference number: 4 (lower is better)
Translates to: FKLFWYNKRMTITSSDTKYSRSS*VPSSSR
Trigger: CCTTGATGAGGAAGGAACTCAAGAAGACCTAGAGTA...TTTTGTATCAGAAGAGGTGATGGTCATTCTCTTGTTATACCAGAAAAGCTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR TCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATAAGCCTGCATACTAGCTaGCCCATCACAAATGATTTT +
Preference number: 4 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGISLHTS*PITNDF
Trigger: AAAATCATTTGTGATGGGTCAGCTAGTATGCAGGCT...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR TCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCTTTTCTTCACTTCATTaGTTGGGCATATGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSFSSLH*LGIWSA
Trigger: TGCTGACCATATGCCCAATCAATGAAGTGAAGAAAA...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR TCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCCTTTGGTTCGAGCTTTaGAGGCTGCAGAGTTATATA +
Preference number: 4 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDALWFEL*RLQSYI
Trigger: TATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAG...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCGATCGCTATAACCACTaGAATGGCTCATTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSDRYNH*NGSLFQ
Trigger: TTGAAACAATGAGCCATTGCAGTGGTTATAGCGATC...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCTCAGGCAGCGTTCAATaGTATCAGTTAAAGTCATTC +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSSGSVQ*YQLKSF
Trigger: GAATGACTTTAACTGATAGCATTGAACGCTGCCTGA...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR GCA 90 bp ATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTTGACTGCAAGGGAAGCTTATGGAAATaGATCTCAAGCTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: ITGGPSSNTFRRNSFDCKGSLWK*ISSFFF
Trigger: GAAGAAAAAGCTTGAGATGCATTTCCATAAGCTTCC...CTTGCAGTCAAATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CCA 90 bp GGTACATATAAATTAACTCTTGAGAACTGTATACACCACAAGTGTGGGGCAAATCATCTTCAGCAAAACTaGAAGGATCGCTATAACCAC +
Preference number: 4 (lower is better)
Translates to: GTYKLTLENCIHHKCGANHLQQN*KDRYNH
Trigger: GTGGTTATAGCGATCCTTCCAGTTTTGCTGAAGATG...ATTTGCCCCACACTTGTGGTGTATACAGTTCTCAAGAGTTAATTTATATGTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR CCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCCATCTTCAGCAAAACTaGAAGGATCGCTATAACCAC +
Preference number: 4 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDAHLQQN*KDRYNH
Trigger: GTGGTTATAGCGATCCTTCCAGTTTTGCTGAAGATG...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATACTCATCAAGGACTTCTaGTCCATCTTCAGCAAAACT +
Preference number: 4 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGILIKDF*SIFSKT
Trigger: AGTTTTGCTGAAGATGGACCAGAAGTCCTTGATGAG...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATACACTCTCTATTCCTCTaGCCAATTCAAAGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGIHSLFL*PIQREV
Trigger: CACTTCTCTTTGAATTGGCCAGAGGAATAGAGAGTG...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675578.1
ENST00000675717.1
3UTR CAA 72 bp TTATCTCGACATTTGCTTCTAGCTTTGGTTCGAGCTTaGAAGGCTGCAGAGTTATATAAATGCCTTTCGAAA +
Preference number: 4 (lower is better)
Translates to: LSRHLLLALVRA*KAAELYKCLSK
Trigger: TTTCGAAAGGCATTTATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAGCTAGAAGCAAATGTCGAGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR TCA 90 bp ATCACAACCATACGAGGCAGTTTAATACCATATTTAAGACATAGGTTTTGCAGTAGCCTGCATACTAGCTaGCCCATCACAAATGATTTT +
Preference number: 4 (lower is better)
Translates to: ITTIRGSLIPYLRHRFCSSLHTS*PITNDF
Trigger: AAAATCATTTGTGATGGGTCAGCTAGTATGCAGGCT...ACTGCAAAACCTATGTCTTAAATATGGTATTAAACTGCCTCGTATGGTTGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674887.1
ENST00000675041.1
CDS-3UTR GCA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCGGAAGCTTATGGAAATaGATCTCAAGCTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSGSLWK*ISSFFF
Trigger: GAAGAAAAAGCTTGAGATGCATTTCCATAAGCTTCC...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CCA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCAGGCTTGGAAGCTTATaGAAATGCATCTCAAGCTTT +
Preference number: 4 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDARLGSL*KCISSF
Trigger: AAAGCTTGAGATGCATTTCCATAAGCTTCCAAGCCT...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR TCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGGAACATAACCAAGTaGCAACATACAAACAAGTTC +
Preference number: 4 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGIWNITK*QHTNKF
Trigger: GAACTTGTTTGTATGTTGTCACTTGGTTATGTTCCA...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR TCA 90 bp AAAGGTACATATAAATTAACTCTTGAGAACTGTATACACCACAAGTGTGGGGCATTAGTTGTACGTCTGTaGCTCAAAAATAAGGGCATT +
Preference number: 4 (lower is better)
Translates to: KGTYKLTLENCIHHKCGALVVRL*LKNKGI
Trigger: AATGCCCTTATTTTTGAGTCACAGACGTACAACTAA...TGCCCCACACTTGTGGTGTATACAGTTCTCAAGAGTTAATTTATATGTACCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR GCA 90 bp TTCAAGCTTTTCTGGTATAACAAGAGAATGACCATCACCTCTTCTGATACAAAAGATCGCTATAACCACTaGAATGGCTCATTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: FKLFWYNKRMTITSSDTKDRYNH*NGSLFQ
Trigger: TTGAAACAATGAGCCATTGCAGTGGTTATAGCGATC...TTTTGTATCAGAAGAGGTGATGGTCATTCTCTTGTTATACCAGAAAAGCTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR GCA 90 bp TTCAAGCTTTTCTGGTATAACAAGAGAATGACCATCACCTCTTCTGATACAAAATCAGGCAGCGTTCAATaGTATCAGTTAAAGTCATTC +
Preference number: 4 (lower is better)
Translates to: FKLFWYNKRMTITSSDTKSGSVQ*YQLKSF
Trigger: GAATGACTTTAACTGATAGCATTGAACGCTGCCTGA...TTTTGTATCAGAAGAGGTGATGGTCATTCTCTTGTTATACCAGAAAAGCTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR CCA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATCTACGGATTTGAAATaGCATGTTGCTTGCACTATA +
Preference number: 4 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGISTDLK*HVACTI
Trigger: TATAGTGCAAGCAACATGCCATTTCAAATCCGTAGA...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CCA 90 bp AAAGGTACATATAAATTAACTCTTGAGAACTGTATACACCACAAGTGTGGGGCACATAATGTTCTTACTTaGCTGAATAAGTTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: KGTYKLTLENCIHHKCGAHNVLT*LNKLAD
Trigger: GTCTGCCAACTTATTCAGCCAAGTAAGAACATTATG...TGCCCCACACTTGTGGTGTATACAGTTCTCAAGAGTTAATTTATATGTACCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR CCA 90 bp TTCAAGCTTTTCTGGTATAACAAGAGAATGACCATCACCTCTTCTGATACAAAAACTTTCAAGCTTTTCTaGTATAACAAGAGAATGACC +
Preference number: 4 (lower is better)
Translates to: FKLFWYNKRMTITSSDTKTFKLF*YNKRMT
Trigger: GGTCATTCTCTTGTTATACCAGAAAAGCTTGAAAGT...TTTTGTATCAGAAGAGGTGATGGTCATTCTCTTGTTATACCAGAAAAGCTTGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS TCA 90 bp TGGTCGGGGAGAGATCGGGCGAGATCGCCGCCGAGAAAGGAACTCTaGCAATGGTTCCTTTCCCGCCCAGCTCCCGGTCAGCCCCTGTCC +
Preference number: 5 (lower is better)
Translates to: WSGRDRARSPPRKEL*QWFLSRPAPGQPLS
Trigger: GGACAGGGGCTGACCGGGAGCTGGGCGGGAAAGGAACCATTGTCAGAGTTCCTTTCTCGGCGGCGATCTCGCCCGATCTCTCCCCGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476927.5
CDS GCA 90 bp GGGGAGTGTTCCGCTTCTTGTTCTTCGGCATCGTGGGACGCCCGGTaGCGCCCAGAGTCGGAGCTTAGCGAGGATCAGCCGATGGAGCTG +
Preference number: 5 (lower is better)
Translates to: GECSASCSSASWDAR*RPESELSEDQPMEL
Trigger: CAGCTCCATCGGCTGATCCTCGCTAAGCTCCGACTCTGGGCGGCACCGGGCGTCCCACGATGCCGAAGAACAAGAAGCGGAACACTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000005558.8
ENST00000403825.8
ENST00000417662.1
ENST00000429071.5
ENST00000432734.1
ENST00000445335.1
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS CCA 90 bp TGCTACCGCGGTGGGGAGTGTTCCGCTTCTTGTTCTTCGGCATCGTaGGACGCCCGGTGCCGCCCAGAGTCGGAGCTTAGCGAGGATCAG +
Preference number: 5 (lower is better)
Translates to: CYRGGECSASCSSAS*DARCRPESELSEDQ
Trigger: CTGATCCTCGCTAAGCTCCGACTCTGGGCGGCACCGGGCGTCCCACGATGCCGAAGAACAAGAAGCGGAACACTCCCCACCGCGGTAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000005558.8
ENST00000403825.8
ENST00000417662.1
ENST00000429071.5
ENST00000432734.1
ENST00000445335.1
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS TCA 90 bp CGATGGAGCTGCACTTTTTACTCGTGCGTCTGTGCGGCGGGCGGCTaGGAGGCGAGTCTTCGGCTAACAACAGAGTCGAGAAGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: RWSCTFYSCVCAAGG*EASLRLTTESRSGG
Trigger: CCCGCCGCTTCTCGACTCTGTTGTTAGCCGAAGACTCGCCTCTCAGCCGCCCGCCGCACAGACGCACGAGTAAAAAGTGCAGCTCCATCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000005558.8
ENST00000403825.8
ENST00000417662.1
ENST00000429071.5
ENST00000432734.1
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS GCA 90 bp AGCGAGGATCAGCCGATGGAGCTGCACTTTTTACTCGTGCGTCTGTaGGGCGGGCGGCTGAGAGGCGAGTCTTCGGCTTGTGATCGGCTT +
Preference number: 5 (lower is better)
Translates to: SEDQPMELHFLLVRL*GGRLRGESSACDRL
Trigger: AAGCCGATCACAAGCCGAAGACTCGCCTCTCAGCCGCCCGCCGCACAGACGCACGAGTAAAAAGTGCAGCTCCATCGGCTGATCCTCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675578.1
CDS GCA 90 bp AGCGAGGATCAGCCGATGGAGCTGCACTTTTTACTCGTGCGTCTGTaGGGCGGGCGGCTGAGAGGCGAGTCTTCGGCTAACAACAGAGTC +
Preference number: 5 (lower is better)
Translates to: SEDQPMELHFLLVRL*GGRLRGESSANNRV
Trigger: GACTCTGTTGTTAGCCGAAGACTCGCCTCTCAGCCGCCCGCCGCACAGACGCACGAGTAAAAAGTGCAGCTCCATCGGCTGATCCTCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000005558.8
ENST00000403825.8
ENST00000417662.1
ENST00000429071.5
ENST00000432734.1
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS GCA 90 bp AGCGAGGATCAGCCGATGGAGCTGCACTTTTTACTCGTGCGTCTGTaGGGCGGGCGGCTGAGAGGCGAGTCTTCGGCTACAAATCCCATG +
Preference number: 5 (lower is better)
Translates to: SEDQPMELHFLLVRL*GGRLRGESSATNPM
Trigger: CATGGGATTTGTAGCCGAAGACTCGCCTCTCAGCCGCCCGCCGCACAGACGCACGAGTAAAAAGTGCAGCTCCATCGGCTGATCCTCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445335.1
CDS CCA 90 bp TGGCAGGCCTCCGAGCAAGCATTCCAGGGCCTACTCTGTCCACTCTaGTCTCCTGACCCATTTACAGCTGACCTTCTCTTTGTCACAACC +
Preference number: 5 (lower is better)
Translates to: WQASEQAFQGLLCPL*SPDPFTADLLFVTT
Trigger: GGTTGTGACAAAGAGAAGGTCAGCTGTAAATGGGTCAGGAGACCAGAGTGGACAGAGTAGGCCCTGGAATGCTTGCTCGGAGGCCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675578.1
CDS-3UTR CAA 90 bp GCTTTCTCTTGTCCACTTTGGCCCGGTGTTTATTTCCATCTGTTGCCAAGGCCCGACCGCTGCTTTCTCTaGTCCACTTTGGCCCGGTGT +
Preference number: 5 (lower is better)
Translates to: AFSCPLWPGVYFHLLPRPDRCFL*STLARC
Trigger: ACACCGGGCCAAAGTGGACAAGAGAAAGCAGCGGTC...GGGCCTTGGCAACAGATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGGACCGCTGCTTTCTCTaGTCCACTTTGGCCCGGTGT +
Preference number: 5 (lower is better)
Translates to: FSLQYICFPTPHGDLQQEDRCFL*STLARC
Trigger: ACACCGGGCCAAAGTGGACAAGAGAAAGCAGCGGTC...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTAAGGAGGGAGAGCTGCTaGAGCCCAGGAGTTAAGAGG +
Preference number: 5 (lower is better)
Translates to: ASLPLTATYSKSIKETSLRRESC*SPGVKR
Trigger: CCTCTTAACTCCTGGGCTCAAGCAGCTCTCCCTCCT...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535603.5
CDS-3UTR CAA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGCGCTGCAGCTGCACGTaGCTCATCACTCTTACCTTT +
Preference number: 5 (lower is better)
Translates to: FSLQYICFPTPHGDLQQERCSCT*LITLTF
Trigger: AAAGGTAAGAGTGATGAGCAACGTGCAGCTGCAGCG...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGGACCGCTGCTTTCTCTaGTCCACTTTGGCCCGGTGT +
Preference number: 5 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLDRCFL*STLARC
Trigger: ACACCGGGCCAAAGTGGACAAGAGAAAGCAGCGGTC...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp CGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAGACCGCTGCTTTCTCTaGTCCACTTTGGCCCGGTGT +
Preference number: 5 (lower is better)
Translates to: REIFIVLSVAASSITGGPDRCFL*STLARC
Trigger: ACACCGGGCCAAAGTGGACAAGAGAAAGCAGCGGTC...TGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS TCA 90 bp CAATGGCTCATTGTTTCAATTGATGCATCTTCATCACTAAAAGGCTaGACATTTCGATGCTGGCCACCTGCTGTCGCCGCCGTCGCTGCG +
Preference number: 5 (lower is better)
Translates to: QWLIVSIDASSSLKG*TFRCWPPAVAAVAA
Trigger: CGCAGCGACGGCGGCGACAGCAGGTGGCCAGCATCGAAATGTTCAGCCTTTTAGTGATGAAGATGCATCAATTGAAACAATGAGCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000005558.8
ENST00000403825.8
ENST00000429071.5
ENST00000445335.1
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CAA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGGGAGTGTTCCGCTTCTaGTTCTTCGGCATCGTGGGA +
Preference number: 5 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLGVFRF*FFGIVG
Trigger: TCCCACGATGCCGAAGAACAAGAAGCGGAACACTCC...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403825.8
ENST00000675578.1
CDS-3UTR CAA 90 bp CCGGTGTTTATTTCCATCTGTTGCCAAGGCCCTAAGCATCTGCGTCAAGGACTCGCAAGTTGCACAAGTTaGCCTAGCCTGCATACTAGC +
Preference number: 5 (lower is better)
Translates to: PVFISICCQGPKHLRQGLASCTS*PSLHTS
Trigger: GCTAGTATGCAGGCTAGGCAAACTTGTGCAACTTGC...GAGTCCTTGACGCAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAACACCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGCGCTGCAGCTGCACGTaGCTCATCACTCTTACCTTT +
Preference number: 5 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLRCSCT*LITLTF
Trigger: AAAGGTAAGAGTGATGAGCAACGTGCAGCTGCAGCG...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp TGTTTATTTCCATCTGTTGCCAAGGCCCTAAGCATCTGCGTCAAGGACTCCATGCGCTGCAGCTGCACGTaGCTCATCACTCTTACCTTT +
Preference number: 5 (lower is better)
Translates to: CLFPSVAKALSICVKDSMRCSCT*LITLTF
Trigger: AAAGGTAAGAGTGATGAGCAACGTGCAGCTGCAGCG...CATGGAGTCCTTGACGCAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674887.1
ENST00000675041.1
CDS-3UTR CAA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGCACAAGAGAGGAGGCTaGGAAGCTTATGGAAATGCA +
Preference number: 5 (lower is better)
Translates to: FSLQYICFPTPHGDLQQEHKRGG*EAYGNA
Trigger: TGCATTTCCATAAGCTTCCAAGCCTCCTCTCTTGTG...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGCACAAGAGAGGAGGCTaGGAAGCTTATGGAAATGCA +
Preference number: 5 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRHKRGG*EAYGNA
Trigger: TGCATTTCCATAAGCTTCCAAGCCTCCTCTCTTGTG...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp CCGGTGTTTATTTCCATCTGTTGCCAAGGCCCTAAGCATCTGCGTCAAGGACTCCACAAGAGAGGAGGCTaGGAAGCTTATGGAAATGCA +
Preference number: 5 (lower is better)
Translates to: PVFISICCQGPKHLRQGLHKRGG*EAYGNA
Trigger: TGCATTTCCATAAGCTTCCAAGCCTCCTCTCTTGTG...GAGTCCTTGACGCAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAACACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp ATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACAGACCGCTGCTTTCTCTaGTCCACTTTGGCCCGGTGT +
Preference number: 5 (lower is better)
Translates to: IVLSVAASSITGGPSSNTDRCFL*STLARC
Trigger: ACACCGGGCCAAAGTGGACAAGAGAAAGCAGCGGTC...TGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTCCAGACTTCCAAGAGTaGTTGGGATGTGGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCPDFQE*LGCGRG
Trigger: TCCCCTCCCACATCCCAACAACTCTTGGAAGTCTGG...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp GTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATGGAGTGTTCCGCTTCTaGTTCTTCGGCATCGTGGGA +
Preference number: 5 (lower is better)
Translates to: VAASSITGGPSSNTFRRNGVFRF*FFGIVG
Trigger: TCCCACGATGCCGAAGAACAAGAAGCGGAACACTCC...ATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGCAAGAGCTGCTTGCCTaGTCTTCGCACTCTTATCCA +
Preference number: 5 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLQELLA*SSHSYP
Trigger: TGGATAAGAGTGCGAAGACAAGGCAAGCAGCTCTTG...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp ACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCCAAGAGCTGCTTGCCTaGTCTTCGCACTCTTATCCA +
Preference number: 5 (lower is better)
Translates to: TRNLHRFKRCSIKHHWGSQELLA*SSHSYP
Trigger: TGGATAAGAGTGCGAAGACAAGGCAAGCAGCTCTTG...GGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGACCTTCAAGAGCTGCTaGCCTTGTCTTCGCACTCTT +
Preference number: 5 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLTFKSC*PCLRTL
Trigger: AAGAGTGCGAAGACAAGGCAAGCAGCTCTTGAAGGT...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp ACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCACCTTCAAGAGCTGCTaGCCTTGTCTTCGCACTCTT +
Preference number: 5 (lower is better)
Translates to: TRNLHRFKRCSIKHHWGSTFKSC*PCLRTL
Trigger: AAGAGTGCGAAGACAAGGCAAGCAGCTCTTGAAGGT...GGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTCGCTGCAGCTGCACGTaGCTCATCACTCTTACCTTT +
Preference number: 5 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCRCSCT*LITLTF
Trigger: AAAGGTAAGAGTGATGAGCAACGTGCAGCTGCAGCG...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGGCAAGTTGCACAAGTTaGCCTAGCCTGCATACTAGC +
Preference number: 5 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLASCTS*PSLHTS
Trigger: GCTAGTATGCAGGCTAGGCAAACTTGTGCAACTTGC...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp TGTTTATTTCCATCTGTTGCCAAGGCCCTAAGCATCTGCGTCAAGGACTCCATGGCAAGTTGCACAAGTTaGCCTAGCCTGCATACTAGC +
Preference number: 5 (lower is better)
Translates to: CLFPSVAKALSICVKDSMASCTS*PSLHTS
Trigger: GCTAGTATGCAGGCTAGGCAAACTTGTGCAACTTGC...CATGGAGTCCTTGACGCAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACACAAGAGAGGAGGCTaGGAAGCTTATGGAAATGCA +
Preference number: 5 (lower is better)
Translates to: ASLPLTATYSKSIKETSLHKRGG*EAYGNA
Trigger: TGCATTTCCATAAGCTTCCAAGCCTCCTCTCTTGTG...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp TTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTTTCTCTTGTCCACTTaGGCCCGGTGTTTATTTCCA +
Preference number: 5 (lower is better)
Translates to: FSLQYICFPTPHGDLQQEFLLST*ARCLFP
Trigger: TGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAA...CTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGGACCGCTGCTTTCTCTaGTCCACTTTGGCCCGGTGT +
Preference number: 5 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWDRCFL*STLARC
Trigger: ACACCGGGCCAAAGTGGACAAGAGAAAGCAGCGGTC...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp TTTGACTGCAAGTGGTACTGCATCCCTGATCCAAGAACCTCCTTAAAGGTGTCACAAGAGCTGCTTGCCTaGTCTTCGCACTCTTATCCA +
Preference number: 5 (lower is better)
Translates to: FDCKWYCIPDPRTSLKVSQELLA*SSHSYP
Trigger: TGGATAAGAGTGCGAAGACAAGGCAAGCAGCTCTTG...TGACACCTTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp CATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACCAAGAGCTGCTTGCCTaGTCTTCGCACTCTTATCCA +
Preference number: 5 (lower is better)
Translates to: HRFKRCSIKHHWGSKFKYQELLA*SSHSYP
Trigger: TGGATAAGAGTGCGAAGACAAGGCAAGCAGCTCTTG...GTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp AAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCGCTGCAGCTGCACGTaGCTCATCACTCTTACCTTT +
Preference number: 5 (lower is better)
Translates to: KREIFIVLSVAASSITGGRCSCT*LITLTF
Trigger: AAAGGTAAGAGTGATGAGCAACGTGCAGCTGCAGCG...ACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
CDS-3UTR CAA 90 bp ACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCCACAAGAGAGGAGGCTaGGAAGCTTATGGAAATGCA +
Preference number: 5 (lower is better)
Translates to: TRNLHRFKRCSIKHHWGSHKRGG*EAYGNA
Trigger: TGCATTTCCATAAGCTTCCAAGCCTCCTCTCTTGTG...GGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp TACTTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAATTTCTCTTGTCCACTTaGGCCCGGTGTTTATTTCCA +
Preference number: 5 (lower is better)
Translates to: YFSLQYICFPTPHGDLQQFLLST*ARCLFP
Trigger: TGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAA...TTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp TACTTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAAGCTTTGGTTCGAGCTTaGAAGGCTGCAGAGTTATAT +
Preference number: 5 (lower is better)
Translates to: YFSLQYICFPTPHGDLQQALVRA*KAAELY
Trigger: ATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAGC...TTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp GCTGCTTTCTCTTGTCCACTTTGGCCCGGTGTTTATTTCCATCTGTTGCCAAGGGCTTTGGTTCGAGCTTaGAAGGCTGCAGAGTTATAT +
Preference number: 5 (lower is better)
Translates to: AAFSCPLWPGVYFHLLPRALVRA*KAAELY
Trigger: ATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAGC...CCTTGGCAACAGATGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGCTCTTATCTCGACATTaGCTTCTAGCTTTGGTTCGA +
Preference number: 5 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRLLSRH*LLALVR
Trigger: TCGAACCAAAGCTAGAAGCAAATGTCGAGATAAGAG...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGCACTGCAATGGCTCATaGTTTCAATTGATGCATCTT +
Preference number: 5 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRHCNGS*FQLMHL
Trigger: AAGATGCATCAATTGAAACAATGAGCCATTGCAGTG...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp GATTCACCAGCAGCTATTCTCATGTTTACATCATCACAAGAGAGGAGGCTTGGAGCAAGTTGCACAAGTTaGCCTAGCCTGCATACTAGC +
Preference number: 5 (lower is better)
Translates to: DSPAAILMFTSSQERRLGASCTS*PSLHTS
Trigger: GCTAGTATGCAGGCTAGGCAAACTTGTGCAACTTGC...TCCAAGCCTCCTCTCTTGTGATGATGTAAACATGAGAATAGCTGCTGGTGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675717.1
CDS-3UTR CAA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTCACAAGAGAGGAGGCTaGGAAGCTTATGGAAATGCA +
Preference number: 5 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCHKRGG*EAYGNA
Trigger: TGCATTTCCATAAGCTTCCAAGCCTCCTCTCTTGTG...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp CGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCATTTCTCTTGTCCACTTaGGCCCGGTGTTTATTTCCA +
Preference number: 5 (lower is better)
Translates to: REIFIVLSVAASSITGGPFLLST*ARCLFP
Trigger: TGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAA...TGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCGACCGCTGCTTTCTCTaGTCCACTTTGGCCCGGTGT +
Preference number: 5 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSDRCFL*STLARC
Trigger: ACACCGGGCCAAAGTGGACAAGAGAAAGCAGCGGTC...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CAA 90 bp TACTTCTCCCTACAGTATATATGCTTCCCTACCCCTCACGGCGACCTACAGCAACTCTTATCTCGACATTaGCTTCTAGCTTTGGTTCGA +
Preference number: 5 (lower is better)
Translates to: YFSLQYICFPTPHGDLQQLLSRH*LLALVR
Trigger: TCGAACCAAAGCTAGAAGCAAATGTCGAGATAAGAG...TTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGCATATATACTGTAGGGAGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTAAACAAGTCTACGGATTaGAAATGGCATGTTGCTTGC +
Preference number: 5 (lower is better)
Translates to: ASLPLTATYSKSIKETSLNKSTD*KWHVAC
Trigger: GCAAGCAACATGCCATTTCAAATCCGTAGACTTGTT...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACAGCTGACCTTCTCTTaGTCACAACCCTATTTATTC +
Preference number: 5 (lower is better)
Translates to: ASLPLTATYSKSIKETSLQLTFS*SQPYLF
Trigger: GAATAAATAGGGTTGTGACAAAGAGAAGGTCAGCTG...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675578.1
CDS TCA 90 bp TACACACATCCCTCTGGAACAACCTTTAACTATGTAGACCTTGAATaGACCAGGAGCCAGAAGGAGTGCAGTCTGGTTTTAACAGCAGTC +
Preference number: 5 (lower is better)
Translates to: YTHPSGTTFNYVDLE*TRSQKECSLVLTAV
Trigger: GACTGCTGTTAAAACCAGACTGCACTCCTTCTGGCTCCTGGTTCATTCAAGGTCTACATAGTTAAAGGTTGTTCCAGAGGGATGTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675578.1
CDS-3UTR CAA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCGGAGTGTTCCGCTTCTaGTTCTTCGGCATCGTGGGA +
Preference number: 5 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSGVFRF*FFGIVG
Trigger: TCCCACGATGCCGAAGAACAAGAAGCGGAACACTCC...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000403825.8
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CAA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACACTGCAATGGCTCATaGTTTCAATTGATGCATCTT +
Preference number: 5 (lower is better)
Translates to: ASLPLTATYSKSIKETSLHCNGS*FQLMHL
Trigger: AAGATGCATCAATTGAAACAATGAGCCATTGCAGTG...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGCAAGAGCTGCTTGCCTaGTCTTCGCACTCTTATCCA +
Preference number: 5 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWQELLA*SSHSYP
Trigger: TGGATAAGAGTGCGAAGACAAGGCAAGCAGCTCTTG...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGACCTTCAAGAGCTGCTaGCCTTGTCTTCGCACTCTT +
Preference number: 5 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWTFKSC*PCLRTL
Trigger: AAGAGTGCGAAGACAAGGCAAGCAGCTCTTGAAGGT...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp AAATGCCTTTCGAAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCCGCTGCAGCTGCACGTaGCTCATCACTCTTACCTTT +
Preference number: 5 (lower is better)
Translates to: KCLSKREIFIVLSVAASSRCSCT*LITLTF
Trigger: AAAGGTAAGAGTGATGAGCAACGTGCAGCTGCAGCG...GCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTTCGAAAGGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
CDS-3UTR CAA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGGCAAGTTGCACAAGTTaGCCTAGCCTGCATACTAGC +
Preference number: 5 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWASCTS*PSLHTS
Trigger: GCTAGTATGCAGGCTAGGCAAACTTGTGCAACTTGC...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTTTTCTCTTGTCCACTTaGGCCCGGTGTTTATTTCCA +
Preference number: 5 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCFLLST*ARCLFP
Trigger: TGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAA...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp TTTGACTGCAAGTGGTACTGCATCCCTGATCCAAGAACCTCCTTAAAGGTGTCATTTCTCTTGTCCACTTaGGCCCGGTGTTTATTTCCA +
Preference number: 5 (lower is better)
Translates to: FDCKWYCIPDPRTSLKVSFLLST*ARCLFP
Trigger: TGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAA...TGACACCTTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCGACCGCTGCTTTCTCTaGTCCACTTTGGCCCGGTGT +
Preference number: 5 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDADRCFL*STLARC
Trigger: ACACCGGGCCAAAGTGGACAAGAGAAAGCAGCGGTC...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CAA 90 bp ACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTACGGATTTGAACAAGTCTACGGATTaGAAATGGCATGTTGCTTGC +
Preference number: 5 (lower is better)
Translates to: TPHGDLQQEYQRNKSTDLNKSTD*KWHVAC
Trigger: GCAAGCAACATGCCATTTCAAATCCGTAGACTTGTT...CAAATCCGTAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCCCAGACTTCCAAGAGTaGTTGGGATGTGGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSPDFQE*LGCGRG
Trigger: TCCCCTCCCACATCCCAACAACTCTTGGAAGTCTGG...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTAATGGTTCTAACCTACTaGGAACATAACCAAGTGACA +
Preference number: 5 (lower is better)
Translates to: ASLPLTATYSKSIKETSLMVLTY*EHNQVT
Trigger: TGTCACTTGGTTATGTTCCAAGTAGGTTAGAACCAT...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp GATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTGGGAGGAGAAGAAACTACCATTaGCAATCTCTTTTCCATGGT +
Preference number: 5 (lower is better)
Translates to: DFHLEGAPDFQELLGCGRRRNYH*QSLFHG
Trigger: ACCATGGAAAAGAGATTGCAAATGGTAGTTTCTTCT...CCTCCCACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCGGAGTGTTCCGCTTCTaGTTCTTCGGCATCGTGGGA +
Preference number: 5 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDAGVFRF*FFGIVG
Trigger: TCCCACGATGCCGAAGAACAAGAAGCGGAACACTCC...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000403825.8
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CAA 90 bp CGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCACACTGCAATGGCTCATaGTTTCAATTGATGCATCTT +
Preference number: 5 (lower is better)
Translates to: REIFIVLSVAASSITGGPHCNGS*FQLMHL
Trigger: AAGATGCATCAATTGAAACAATGAGCCATTGCAGTG...TGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp TGTTTATTTCCATCTGTTGCCAAGGCCCTAAGCATCTGCGTCAAGGACTCCATGCACTGCAATGGCTCATaGTTTCAATTGATGCATCTT +
Preference number: 5 (lower is better)
Translates to: CLFPSVAKALSICVKDSMHCNGS*FQLMHL
Trigger: AAGATGCATCAATTGAAACAATGAGCCATTGCAGTG...CATGGAGTCCTTGACGCAGATGCTTAGGGCCTTGGCAACAGATGGAAATAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674887.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp CGAGCTTTGAAGGCTGCAGAGTTATATAAATGCCTTTCGAAACGAGAAATCTTCCAAGAGCTGCTTGCCTaGTCTTCGCACTCTTATCCA +
Preference number: 5 (lower is better)
Translates to: RALKAAELYKCLSKREIFQELLA*SSHSYP
Trigger: TGGATAAGAGTGCGAAGACAAGGCAAGCAGCTCTTG...GAAGATTTCTCGTTTCGAAAGGCATTTATATAACTCTGCAGCCTTCAAAGCTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTACCTTCAAGAGCTGCTaGCCTTGTCTTCGCACTCTT +
Preference number: 5 (lower is better)
Translates to: NQCYCSQMLRLATFLAYATFKSC*PCLRTL
Trigger: AAGAGTGCGAAGACAAGGCAAGCAGCTCTTGAAGGT...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CAA 90 bp AAATGCCTTTCGAAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCACCTTCAAGAGCTGCTaGCCTTGTCTTCGCACTCTT +
Preference number: 5 (lower is better)
Translates to: KCLSKREIFIVLSVAASSTFKSC*PCLRTL
Trigger: AAGAGTGCGAAGACAAGGCAAGCAGCTCTTGAAGGT...GCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTTCGAAAGGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp TTTTTCTTCACTTCATTGATTGGGCATATGGTCAGCAGTAGTGTCCATGCAAGAACCTTCAAGAGCTGCTaGCCTTGTCTTCGCACTCTT +
Preference number: 5 (lower is better)
Translates to: FFFTSLIGHMVSSSVHARTFKSC*PCLRTL
Trigger: AAGAGTGCGAAGACAAGGCAAGCAGCTCTTGAAGGT...TCTTGCATGGACACTACTGCTGACCATATGCCCAATCAATGAAGTGAAGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675717.1
CDS-3UTR CAA 90 bp ATCGTTTTAAGCGTTGCAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCTCTTGTCCACTTaGGCCCGGTGTTTATTTCCA +
Preference number: 5 (lower is better)
Translates to: IVLSVAASSITGGPSSNTFLLST*ARCLFP
Trigger: TGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAA...TGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTTATACACATAAAGCTTaGTCTCCCTGCCCACCTGGC +
Preference number: 5 (lower is better)
Translates to: NQCYCSQMLRLATFLAYAYTHKA*SPCPPG
Trigger: GCCAGGTGGGCAGGGAGACAAAGCTTTATGTGTATA...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCCCAGACTTCCAAGAGTaGTTGGGATGTGGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDAPDFQE*LGCGRG
Trigger: TCCCCTCCCACATCCCAACAACTCTTGGAAGTCTGG...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp GCTTCCCTACCCCTCACGGCGACCTACAGCAAGAGTATCAAAGAAACAAGTCTAAGAAGAAACTACCATTaGCAATCTCTTTTCCATGGT +
Preference number: 5 (lower is better)
Translates to: ASLPLTATYSKSIKETSLRRNYH*QSLFHG
Trigger: ACCATGGAAAAGAGATTGCAAATGGTAGTTTCTTCT...TAGACTTGTTTCTTTGATACTCTTGCTGTAGGTCGCCGTGAGGGGTAGGGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS TCA 90 bp GATGCTAACGCTGCAGCTGCACGTTGCTCATCACTCTTACTTGGCTaGATAAGTTGGCAGACACCAAATCTCGTTTTGTTTTGTTTGTTA +
Preference number: 5 (lower is better)
Translates to: DANAAAARCSSLLLG*ISWQTPNLVLFCLL
Trigger: TAACAAACAAAACAAAACGAGATTTGGTGTCTGCCAACTTATTCAGCCAAGTAAGAGTGATGAGCAACGTGCAGCTGCAGCGTTAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486688.1
CDS GCA 90 bp ACCAGAGAACCTTTCGAAACGAGAAATCTTCATCGTTTTAAGCGTTaGAGCATCAAGCATCACTGGGGGTCCAAGTTCAAATACATTTCG +
Preference number: 5 (lower is better)
Translates to: TREPFETRNLHRFKR*SIKHHWGSKFKYIS
Trigger: CGAAATGTATTTGAACTTGGACCCCCAGTGATGCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTTCGAAAGGTTCTCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462155.2
CDS GCA 90 bp CACCCACATCTCACTCTCTATTCCTCTGGCCAATTCAAAGAGAAGTaGCAAAGATTCACCAGCAGCTATTCTCATGTTTACATCATCACA +
Preference number: 5 (lower is better)
Translates to: HPHLTLYSSGQFKEK*QRFTSSYSHVYIIT
Trigger: TGTGATGATGTAAACATGAGAATAGCTGCTGGTGAATCTTTGGCACTTCTCTTTGAATTGGCCAGAGGAATAGAGAGTGAGATGTGGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674887.1
CDS-3UTR CAA 90 bp TTCAAGCTTTTCTGGTATAACAAGAGAATGACCATCACCTCTTCTGATACAAAAGGAGTGTTCCGCTTCTaGTTCTTCGGCATCGTGGGA +
Preference number: 5 (lower is better)
Translates to: FKLFWYNKRMTITSSDTKGVFRF*FFGIVG
Trigger: TCCCACGATGCCGAAGAACAAGAAGCGGAACACTCC...TTTTGTATCAGAAGAGGTGATGGTCATTCTCTTGTTATACCAGAAAAGCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR CAA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCCAAGAGCTGCTTGCCTaGTCTTCGCACTCTTATCCA +
Preference number: 5 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSQELLA*SSHSYP
Trigger: TGGATAAGAGTGCGAAGACAAGGCAAGCAGCTCTTG...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CAA 90 bp AAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTACCTTCAAGAGCTGCTaGCCTTGTCTTCGCACTCTT +
Preference number: 5 (lower is better)
Translates to: KNSPTSALLSRHLLLALVTFKSC*PCLRTL
Trigger: AAGAGTGCGAAGACAAGGCAAGCAGCTCTTGAAGGT...AACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATACGCTGCAGCTGCACGTaGCTCATCACTCTTACCTTT +
Preference number: 5 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGIRCSCT*LITLTF
Trigger: AAAGGTAAGAGTGATGAGCAACGTGCAGCTGCAGCG...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
CDS-3UTR CAA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCGCAAGTTGCACAAGTTaGCCTAGCCTGCATACTAGC +
Preference number: 5 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSASCTS*PSLHTS
Trigger: GCTAGTATGCAGGCTAGGCAAACTTGTGCAACTTGC...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CAA 90 bp CTAGAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGCAAGTTGCACAAGTTaGCCTAGCCTGCATACTAGC +
Preference number: 5 (lower is better)
Translates to: LEEFSNICSLISTFASSFASCTS*PSLHTS
Trigger: GCTAGTATGCAGGCTAGGCAAACTTGTGCAACTTGC...AAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGGCTTTGGTTCGAGCTTaGAAGGCTGCAGAGTTATAT +
Preference number: 5 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWALVRA*KAAELY
Trigger: ATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAGC...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCTATACACATAAAGCTTaGTCTCCCTGCCCACCTGGC +
Preference number: 5 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSYTHKA*SPCPPG
Trigger: GCCAGGTGGGCAGGGAGACAAAGCTTTATGTGTATA...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp GCAAATGATTTTCACCTAGAGGGAGCACCAGACTTCCAAGAGTTGTTGGGATGTATGGTTCTAACCTACTaGGAACATAACCAAGTGACA +
Preference number: 5 (lower is better)
Translates to: ANDFHLEGAPDFQELLGCMVLTY*EHNQVT
Trigger: TGTCACTTGGTTATGTTCCAAGTAGGTTAGAACCAT...ACATCCCAACAACTCTTGGAAGTCTGGTGCTCCCTCTAGGTGAAAATCATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS TCA 90 bp AGGGTTAGGTCAATTAATCCCTTCAACTTGTACTCTAGGTCTTCTTaGGTTCCTTCCTCATCAAGGACTTCTGGTCCATCTTCAGCAAAA +
Preference number: 5 (lower is better)
Translates to: RVRSINPFNLYSRSS*VPSSSRTSGPSSAK
Trigger: TTTTGCTGAAGATGGACCAGAAGTCCTTGATGAGGAAGGAACTCAAGAAGACCTAGAGTACAAGTTGAAGGGATTAATTGACCTAACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000005558.8
ENST00000403825.8
ENST00000429071.5
ENST00000440625.5
ENST00000476927.5
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS TCA 90 bp CAATGGCTCATTGTTTCAATTGATGCATCTTCATCACTAAAAGGCTaGACATTTCGATGCTGGCCACCTTGTGATCGGCTTCTGAGAATT +
Preference number: 5 (lower is better)
Translates to: QWLIVSIDASSSLKG*TFRCWPPCDRLLRI
Trigger: AATTCTCAGAAGCCGATCACAAGGTGGCCAGCATCGAAATGTTCAGCCTTTTAGTGATGAAGATGCATCAATTGAAACAATGAGCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621379.4
CDS CCA 90 bp TCAAAGTTCAGTGAGAGACAGATATACCAATATAGCTTCTACCCTTaGCTCCCCAGTCCCCAAACCAAACATTCACAGACTTCCAATTAT +
Preference number: 5 (lower is better)
Translates to: SKFSERQIYQYSFYP*LPSPQTKHSQTSNY
Trigger: ATAATTGGAAGTCTGTGAATGTTTGGTTTGGGGACTGGGGAGCCAAGGGTAGAAGCTATATTGGTATATCTGTCTCTCACTGAACTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489994.5
CDS-3UTR CAA 90 bp AAAGGTACATATAAATTAACTCTTGAGAACTGTATACACCACAAGTGTGGGGCACAAGAGCTGCTTGCCTaGTCTTCGCACTCTTATCCA +
Preference number: 5 (lower is better)
Translates to: KGTYKLTLENCIHHKCGAQELLA*SSHSYP
Trigger: TGGATAAGAGTGCGAAGACAAGGCAAGCAGCTCTTG...TGCCCCACACTTGTGGTGTATACAGTTCTCAAGAGTTAATTTATATGTACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR CAA 90 bp AAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTTCACAAGAGAGGAGGCTaGGAAGCTTATGGAAATGCA +
Preference number: 5 (lower is better)
Translates to: KNSPTSALLSRHLLLALVHKRGG*EAYGNA
Trigger: TGCATTTCCATAAGCTTCCAAGCCTCCTCTCTTGTG...AACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp AATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATGCTGCTTTGGTTCGAGCTTaGAAGGCTGCAGAGTTATAT +
Preference number: 5 (lower is better)
Translates to: NQCYCSQMLRLATFLAYAALVRA*KAAELY
Trigger: ATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAGC...AGCATATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CAA 90 bp AAACAAGTTCTAGATTCTAAACCTGTTTTCCACTGCACTGTAACTGGGGGATGGCTCTTATCTCGACATTaGCTTCTAGCTTTGGTTCGA +
Preference number: 5 (lower is better)
Translates to: KQVLDSKPVFHCTVTGGWLLSRH*LLALVR
Trigger: TCGAACCAAAGCTAGAAGCAAATGTCGAGATAAGAG...CCATCCCCCAGTTACAGTGCAGTGGAAAACAGGTTTAGAATCTAGAACTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATATACACATAAAGCTTaGTCTCCCTGCCCACCTGGC +
Preference number: 5 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGIYTHKA*SPCPPG
Trigger: GCCAGGTGGGCAGGGAGACAAAGCTTTATGTGTATA...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCTATACACATAAAGCTTaGTCTCCCTGCCCACCTGGC +
Preference number: 5 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDAYTHKA*SPCPPG
Trigger: GCCAGGTGGGCAGGGAGACAAAGCTTTATGTGTATA...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp GGTTTTTATTGGACTGAAGTTACCGTCCTTATCTGGCTGAAGCAACTGTTAGCTACTATGATGACTGACTaGCAAACACTCCAGACAAAC +
Preference number: 5 (lower is better)
Translates to: GFYWTEVTVLIWLKQLLATMMTD*QTLQTN
Trigger: GTTTGTCTGGAGTGTTTGCAAGTCAGTCATCATAGT...AGCTAACAGTTGCTTCAGCCAGATAAGGACGGTAACTTCAGTCCAATAAAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462155.2
CDS-3UTR CAA 90 bp AATTCATTTGACTGCAAGTGGTACTGCATCCCTGATCCAAGAACCTCCTTAAAGCACTGCAATGGCTCATaGTTTCAATTGATGCATCTT +
Preference number: 5 (lower is better)
Translates to: NSFDCKWYCIPDPRTSLKHCNGS*FQLMHL
Trigger: AAGATGCATCAATTGAAACAATGAGCCATTGCAGTG...CTTTAAGGAGGTTCTTGGATCAGGGATGCAGTACCACTTGCAGTCAAATGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp TTCAAGCTTTTCTGGTATAACAAGAGAATGACCATCACCTCTTCTGATACAAAAACCTTCAAGAGCTGCTaGCCTTGTCTTCGCACTCTT +
Preference number: 5 (lower is better)
Translates to: FKLFWYNKRMTITSSDTKTFKSC*PCLRTL
Trigger: AAGAGTGCGAAGACAAGGCAAGCAGCTCTTGAAGGT...TTTTGTATCAGAAGAGGTGATGGTCATTCTCTTGTTATACCAGAAAAGCTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR CAA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATACACAAGAGAGGAGGCTaGGAAGCTTATGGAAATGCA +
Preference number: 5 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGIHKRGG*EAYGNA
Trigger: TGCATTTCCATAAGCTTCCAAGCCTCCTCTCTTGTG...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CAA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCTTTCTCTTGTCCACTTaGGCCCGGTGTTTATTTCCA +
Preference number: 5 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSFLLST*ARCLFP
Trigger: TGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAA...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CAA 90 bp CTAGAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGCTTTGGTTCGAGCTTaGAAGGCTGCAGAGTTATAT +
Preference number: 5 (lower is better)
Translates to: LEEFSNICSLISTFASSFALVRA*KAAELY
Trigger: ATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAGC...AAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp TCACTGGGGGTCCAAGTTCAAATACATTTCGAAGGAATTCATTTGACTGCAAGTCTCTTATCTCGACATTaGCTTCTAGCTTTGGTTCGA +
Preference number: 5 (lower is better)
Translates to: SLGVQVQIHFEGIHLTASLLSRH*LLALVR
Trigger: TCGAACCAAAGCTAGAAGCAAATGTCGAGATAAGAG...ACTTGCAGTCAAATGAATTCCTTCGAAATGTATTTGAACTTGGACCCCCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp GAAGAATTCTCCAACATCTGCTCTCTTATCTCGACATTTGCTTCTAGCTTTGGTCTCTTATCTCGACATTaGCTTCTAGCTTTGGTTCGA +
Preference number: 5 (lower is better)
Translates to: EEFSNICSLISTFASSFGLLSRH*LLALVR
Trigger: TCGAACCAAAGCTAGAAGCAAATGTCGAGATAAGAG...ACCAAAGCTAGAAGCAAATGTCGAGATAAGAGAGCAGATGTTGGAGAATTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp AAATGCCTTTCGAAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCTTATCCTCTTTCCTGTaGGTAACAGACAAACCTCTG +
Preference number: 5 (lower is better)
Translates to: KCLSKREIFIVLSVAASSLSSFL*VTDKPL
Trigger: CAGAGGTTTGTCTGTTACCAACAGGAAAGAGGATAA...GCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTTCGAAAGGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674915.1
ENST00000675717.1
CDS-3UTR CAA 90 bp AAATGCCTTTCGAAACGAGAAATCTTCATCGTTTTAAGCGTTGCAGCATCAAGCCACTGCAATGGCTCATaGTTTCAATTGATGCATCTT +
Preference number: 5 (lower is better)
Translates to: KCLSKREIFIVLSVAASSHCNGS*FQLMHL
Trigger: AAGATGCATCAATTGAAACAATGAGCCATTGCAGTG...GCTTGATGCTGCAACGCTTAAAACGATGAAGATTTCTCGTTTCGAAAGGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS-3UTR CAA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCTTTCTCTTGTCCACTTaGGCCCGGTGTTTATTTCCA +
Preference number: 5 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDAFLLST*ARCLFP
Trigger: TGGAAATAAACACCGGGCCAAAGTGGACAAGAGAAA...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CAA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCGCTTTGGTTCGAGCTTaGAAGGCTGCAGAGTTATAT +
Preference number: 5 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDAALVRA*KAAELY
Trigger: ATATAACTCTGCAGCCTTCAAAGCTCGAACCAAAGC...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CAA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCCTCTTATCTCGACATTaGCTTCTAGCTTTGGTTCGA +
Preference number: 5 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSLLSRH*LLALVR
Trigger: TCGAACCAAAGCTAGAAGCAAATGTCGAGATAAGAG...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CAA 90 bp AGTCTCATACAGCAGATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCCACTGCAATGGCTCATaGTTTCAATTGATGCATCTT +
Preference number: 5 (lower is better)
Translates to: SLIQQIKSVLLLSDVKVSHCNGS*FQLMHL
Trigger: AAGATGCATCAATTGAAACAATGAGCCATTGCAGTG...GCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTATCTGCTGTATGAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CAA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATAAACAAGTCTACGGATTaGAAATGGCATGTTGCTTGC +
Preference number: 5 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGINKSTD*KWHVAC
Trigger: GCAAGCAACATGCCATTTCAAATCCGTAGACTTGTT...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS-3UTR CAA 90 bp ATAAAATCAGTGTTACTGCTCTCAGATGTTAAGGTTAGCAACCTTTCTGGCATATTATCCTCTTTCCTGTaGGTAACAGACAAACCTCTG +
Preference number: 5 (lower is better)
Translates to: IKSVLLLSDVKVSNLSGILSSFL*VTDKPL
Trigger: CAGAGGTTTGTCTGTTACCAACAGGAAAGAGGATAA...TATGCCAGAAAGGTTGCTAACCTTAACATCTGAGAGCAGTAACACTGATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674915.1
ENST00000675717.1
CDS-3UTR CAA 90 bp AAAGGTACATATAAATTAACTCTTGAGAACTGTATACACCACAAGTGTGGGGCACACTGCAATGGCTCATaGTTTCAATTGATGCATCTT +
Preference number: 5 (lower is better)
Translates to: KGTYKLTLENCIHHKCGAHCNGS*FQLMHL
Trigger: AAGATGCATCAATTGAAACAATGAGCCATTGCAGTG...TGCCCCACACTTGTGGTGTATACAGTTCTCAAGAGTTAATTTATATGTACCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR CAA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCCACTGCAATGGCTCATaGTTTCAATTGATGCATCTT +
Preference number: 5 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDAHCNGS*FQLMHL
Trigger: AAGATGCATCAATTGAAACAATGAGCCATTGCAGTG...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS-3UTR CAA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCATGGTTCTAACCTACTaGGAACATAACCAAGTGACA +
Preference number: 5 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDAMVLTY*EHNQVT
Trigger: TGTCACTTGGTTATGTTCCAAGTAGGTTAGAACCAT...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS TCA 90 bp ATTTTAAGAGTGGGCCAGTGTTCCAGTGCTATTACTAAATGTTACTaGAAAGAAGATAACACACTCCTTATTAGTTGTACGTCTGTGACT +
Preference number: 5 (lower is better)
Translates to: ILRVGQCSSAITKCY*KEDNTLLISCTSVT
Trigger: AGTCACAGACGTACAACTAATAAGGAGTGTGTTATCTTCTTTTCAGTAACATTTAGTAATAGCACTGGAACACTGGCCCACTCTTAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS-3UTR CAA 90 bp TGGCTTTTAAGTACAGCTATAAGGTCTCATGGTATAATTCCTTTTGTTGATGCCAGAAGAAACTACCATTaGCAATCTCTTTTCCATGGT +
Preference number: 5 (lower is better)
Translates to: WLLSTAIRSHGIIPFVDARRNYH*QSLFHG
Trigger: ACCATGGAAAAGAGATTGCAAATGGTAGTTTCTTCT...GGCATCAACAAAAGGAATTATACCATGAGACCTTATAGCTGTACTTAAAAGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000403825.8
ENST00000535603.5
ENST00000621379.4
ENST00000675578.1
CDS CAA 90 bp CCGCCGCCGCCAGCACTGCTACCGCGGTGGGGAGTGTTCCGCTTCTaGTTCTTCGGCATCGTGGGACGCCCGGTGCCGCCCAGAGTCGGA +
Preference number: 6 (lower is better)
Translates to: PPPPALLPRWGVFRF*FFGIVGRPVPPRVG
Trigger: TCCGACTCTGGGCGGCACCGGGCGTCCCACGATGCCGAAGAACAAGAAGCGGAACACTCCCCACCGCGGTAGCAGTGCTGGCGGCGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000005558.8
ENST00000403825.8
ENST00000429071.5
ENST00000432734.1
ENST00000445335.1
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS CAA 72 bp CCAGCACTGCTACCGCGGTGGGGAGTGTTCCGCTTCTaGTTCTTCGGCATCGTGGGACGCCCGGTGCCGCCC +
Preference number: 6 (lower is better)
Translates to: PALLPRWGVFRF*FFGIVGRPVPP
Trigger: GGGCGGCACCGGGCGTCCCACGATGCCGAAGAACAAGAAGCGGAACACTCCCCACCGCGGTAGCAGTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000005558.8
ENST00000403825.8
ENST00000417662.1
ENST00000429071.5
ENST00000432734.1
ENST00000445335.1
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS CCA 72 bp GCTCCTGACCCGCCGCCGCCAGCACTGCTACCGCGGTaGGGAGTGTTCCGCTTCTTGTTCTTCGGCATCGTG +
Preference number: 6 (lower is better)
Translates to: APDPPPPALLPR*GVFRFLFFGIV
Trigger: CACGATGCCGAAGAACAAGAAGCGGAACACTCCCCACCGCGGTAGCAGTGCTGGCGGCGGCGGGTCAGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000005558.8
ENST00000403825.8
ENST00000429071.5
ENST00000432734.1
ENST00000445335.1
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS GCA 72 bp TCCGCTTCTTGTTCTTCGGCATCGTGGGACGCCCGGTaGCGCCCAGAGTCGGAGCTTAGCGAGGATCAGCCG +
Preference number: 6 (lower is better)
Translates to: SASCSSASWDAR*RPESELSEDQP
Trigger: CGGCTGATCCTCGCTAAGCTCCGACTCTGGGCGGCACCGGGCGTCCCACGATGCCGAAGAACAAGAAGCGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000005558.8
ENST00000403825.8
ENST00000417662.1
ENST00000429071.5
ENST00000432734.1
ENST00000445335.1
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS CCA 72 bp GGTGGGGAGTGTTCCGCTTCTTGTTCTTCGGCATCGTaGGACGCCCGGTGCCGCCCAGAGTCGGAGCTTAGC +
Preference number: 6 (lower is better)
Translates to: GGECSASCSSAS*DARCRPESELS
Trigger: GCTAAGCTCCGACTCTGGGCGGCACCGGGCGTCCCACGATGCCGAAGAACAAGAAGCGGAACACTCCCCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000005558.8
ENST00000403825.8
ENST00000417662.1
ENST00000429071.5
ENST00000432734.1
ENST00000445335.1
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS GCA 72 bp CAGCCGATGGAGCTGCACTTTTTACTCGTGCGTCTGTaGGGCGGGCGGCTGAGAGGCGAGTCTTCGGCTAAC +
Preference number: 6 (lower is better)
Translates to: QPMELHFLLVRL*GGRLRGESSAN
Trigger: GTTAGCCGAAGACTCGCCTCTCAGCCGCCCGCCGCACAGACGCACGAGTAAAAAGTGCAGCTCCATCGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000005558.8
ENST00000403825.8
ENST00000417662.1
ENST00000429071.5
ENST00000432734.1
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS GCA 72 bp CAGCCGATGGAGCTGCACTTTTTACTCGTGCGTCTGTaGGGCGGGCGGCTGAGAGGCGAGTCTTCGGCTACA +
Preference number: 6 (lower is better)
Translates to: QPMELHFLLVRL*GGRLRGESSAT
Trigger: TGTAGCCGAAGACTCGCCTCTCAGCCGCCCGCCGCACAGACGCACGAGTAAAAAGTGCAGCTCCATCGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445335.1
CDS GCA 72 bp CAGCCGATGGAGCTGCACTTTTTACTCGTGCGTCTGTaGGGCGGGCGGCTGAGAGGCGAGTCTTCGGCTTGT +
Preference number: 6 (lower is better)
Translates to: QPMELHFLLVRL*GGRLRGESSAC
Trigger: ACAAGCCGAAGACTCGCCTCTCAGCCGCCCGCCGCACAGACGCACGAGTAAAAAGTGCAGCTCCATCGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675578.1
CDS CCA 72 bp GCCGCCCAGAGTCGGAGCTTAGCGAGGATCAGCCGATaGAGCTGCACTTTTTACTCGTGCGTCTGTGCGGCG +
Preference number: 6 (lower is better)
Translates to: AAQSRSLARISR*SCTFYSCVCAA
Trigger: CGCCGCACAGACGCACGAGTAAAAAGTGCAGCTCCATCGGCTGATCCTCGCTAAGCTCCGACTCTGGGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000005558.8
ENST00000403825.8
ENST00000417662.1
ENST00000429071.5
ENST00000432734.1
ENST00000445335.1
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS TCA 72 bp TGCACTTTTTACTCGTGCGTCTGTGCGGCGGGCGGCTaGGAGGCGAGTCTTCGGCTACAAATCCCATGCGGC +
Preference number: 6 (lower is better)
Translates to: CTFYSCVCAAGG*EASLRLQIPCG
Trigger: GCCGCATGGGATTTGTAGCCGAAGACTCGCCTCTCAGCCGCCCGCCGCACAGACGCACGAGTAAAAAGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445335.1
CDS TCA 72 bp AGAGATCGGGCGAGATCGCCGCCGAGAAAGGAACTCTaGCAATGGTTCCTTTCCCGCCCAGCTCCCGGTCAG +
Preference number: 6 (lower is better)
Translates to: RDRARSPPRKEL*QWFLSRPAPGQ
Trigger: CTGACCGGGAGCTGGGCGGGAAAGGAACCATTGTCAGAGTTCCTTTCTCGGCGGCGATCTCGCCCGATCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476927.5
CDS TCA 72 bp TGCACTTTTTACTCGTGCGTCTGTGCGGCGGGCGGCTaGGAGGCGAGTCTTCGGCTAACAACAGAGTCGAGA +
Preference number: 6 (lower is better)
Translates to: CTFYSCVCAAGG*EASLRLTTESR
Trigger: TCTCGACTCTGTTGTTAGCCGAAGACTCGCCTCTCAGCCGCCCGCCGCACAGACGCACGAGTAAAAAGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000005558.8
ENST00000403825.8
ENST00000417662.1
ENST00000429071.5
ENST00000432734.1
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS TCA 72 bp GGTAAGAGTGGGCGGTGGCGGCAGCAGAAATCCCCGTaGAGAGCTTGTGATCGGCTTCTGAGAATTAAATGG +
Preference number: 6 (lower is better)
Translates to: GKSGRWRQQKSP*RACDRLLRIKW
Trigger: CCATTTAATTCTCAGAAGCCGATCACAAGCTCTTCACGGGGATTTCTGCTGCCGCCACCGCCCACTCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000005558.8
ENST00000432734.1
CDS TCA 72 bp GGTAAGAGTGGGCGGTGGCGGCAGCAGAAATCCCCGTaGAGAGCTGTGATCGAAAACGATACATGTTTCTCT +
Preference number: 6 (lower is better)
Translates to: GKSGRWRQQKSP*RAVIENDTCFS
Trigger: AGAGAAACATGTATCGTTTTCGATCACAGCTCTTCACGGGGATTTCTGCTGCCGCCACCGCCCACTCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000403825.8
ENST00000429071.5
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675717.1
CDS CCA 72 bp TCCGAGCAAGCATTCCAGGGCCTACTCTGTCCACTCTaGTCTCCTGACCCATTTACAGCTGACCTTCTCTTT +
Preference number: 6 (lower is better)
Translates to: SEQAFQGLLCPL*SPDPFTADLLF
Trigger: AAAGAGAAGGTCAGCTGTAAATGGGTCAGGAGACCAGAGTGGACAGAGTAGGCCCTGGAATGCTTGCTCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675578.1
CDS CAA 90 bp TCTGTCCACTCTGGTCTCCTGACCCATTTACAGCTGACCTTCTCTTaGTCACAACCCTATTTATTCTCCCATCTCTCGCCCACTGATCCA +
Preference number: 6 (lower is better)
Translates to: SVHSGLLTHLQLTFS*SQPYLFSHLSPTDP
Trigger: TGGATCAGTGGGCGAGAGATGGGAGAATAAATAGGGTTGTGACAAAGAGAAGGTCAGCTGTAAATGGGTCAGGAGACCAGAGTGGACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675578.1
CDS CAA 72 bp TCTGGTCTCCTGACCCATTTACAGCTGACCTTCTCTTaGTCACAACCCTATTTATTCTCCCATCTCTCGCCC +
Preference number: 6 (lower is better)
Translates to: SGLLTHLQLTFS*SQPYLFSHLSP
Trigger: GGGCGAGAGATGGGAGAATAAATAGGGTTGTGACAAAGAGAAGGTCAGCTGTAAATGGGTCAGGAGACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675578.1
CDS TCA 72 bp CCCTCTGGAACAACCTTTAACTATGTAGACCTTGAATaGACCAGGAGCCAGAAGGAGTGCAGTCTGGTTTTA +
Preference number: 6 (lower is better)
Translates to: PSGTTFNYVDLE*TRSQKECSLVL
Trigger: TAAAACCAGACTGCACTCCTTCTGGCTCCTGGTTCATTCAAGGTCTACATAGTTAAAGGTTGTTCCAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000005558.8
ENST00000621379.4
ENST00000675578.1
CDS GCA 72 bp GAAGCCAGTGCATTTTTAATACCTTCAAGAGCTGCTTaGCTTGTCTTCGCACTCTTATCCAGGGTTAGGTCA +
Preference number: 6 (lower is better)
Translates to: EASAFLIPSRAA*LVFALLSRVRS
Trigger: TGACCTAACCCTGGATAAGAGTGCGAAGACAAGGCAAGCAGCTCTTGAAGGTATTAAAAATGCACTGGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000005558.8
ENST00000403825.8
ENST00000429071.5
ENST00000440625.5
ENST00000476927.5
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS TCA 72 bp TCAATTAATCCCTTCAACTTGTACTCTAGGTCTTCTTaGGTTCCTTCCTCATCAAGGACTTCTGGTCCATCT +
Preference number: 6 (lower is better)
Translates to: SINPFNLYSRSS*VPSSSRTSGPS
Trigger: AGATGGACCAGAAGTCCTTGATGAGGAAGGAACTCAAGAAGACCTAGAGTACAAGTTGAAGGGATTAATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000005558.8
ENST00000403825.8
ENST00000429071.5
ENST00000440625.5
ENST00000443101.6
ENST00000476927.5
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS GCA 72 bp CATCTTCAGCAAAACTGGAAGGATCGCTATAACCACTaGAATGGCTCATTGTTTCAATTGATGCATCTTCAT +
Preference number: 6 (lower is better)
Translates to: HLQQNWKDRYNH*NGSLFQLMHLH
Trigger: ATGAAGATGCATCAATTGAAACAATGAGCCATTGCAGTGGTTATAGCGATCCTTCCAGTTTTGCTGAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000005558.8
ENST00000403825.8
ENST00000429071.5
ENST00000440625.5
ENST00000443101.6
ENST00000476927.5
ENST00000535603.5
ENST00000621379.4
ENST00000674887.1
ENST00000674915.1
ENST00000675041.1
ENST00000675578.1
ENST00000675717.1
CDS CAA 72 bp TGCACGTTGCTCATCACTCTTACTTGGCTGAATAAGTaGGCAGACACCAAATCTCGTTTTGTTTTGTTTGTT +
Preference number: 6 (lower is better)
Translates to: CTLLITLTWLNK*ADTKSRFVLFV
Trigger: AACAAACAAAACAAAACGAGATTTGGTGTCTGCCAACTTATTCAGCCAAGTAAGAGTGATGAGCAACGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486688.1
CDS TCA 72 bp GTGGGCCAGTGTTCCAGTGCTATTACTAAATGTTACTaGAAAGAAGATAACACACTCCTTATTAGTTGTACG +
Preference number: 6 (lower is better)
Translates to: VGQCSSAITKCY*KEDNTLLISCT
Trigger: CGTACAACTAATAAGGAGTGTGTTATCTTCTTTTCAGTAACATTTAGTAATAGCACTGGAACACTGGCCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429071.5
CDS TCA 72 bp ATGCAAAAATCGAACCCAGAAATGCTGACTACAAGATaGTGTACTACAGCAAAACAATTAACATTTCCCTTC +
Preference number: 6 (lower is better)
Translates to: MQKSNPEMLTTR*CTTAKQLTFPF
Trigger: GAAGGGAAATGTTAATTGTTTTGCTGTAGTACATCATCTTGTAGTCAGCATTTCTGGGTTCGATTTTTGCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000470441.1
ENST00000489994.5
CDS TCA 72 bp TTCAACTGTAATTCAAAGATAGAAAGCTTAGACATATaGGCTAAAGAAGCCTACCCTCTATCAAAAAGCCTT +
Preference number: 6 (lower is better)
Translates to: FNCNSKIESLDI*AKEAYPLSKSL
Trigger: AAGGCTTTTTGATAGAGGGTAGGCTTCTTTAGCTCATATGTCTAAGCTTTCTATCTTTGAATTACAGTTGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421296.1