Pregenerated sensors for IFNW1 (Homo sapiens)
Ensembl gene IDs: ENSG00000177047Ensembl transcript IDs: ENST00000380229.3, ENST00000380229.4
Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGTACACCTGCATTGCTTGACATCAATTCCAAAATATGCCACTTTGATACTCACGAAATAAGAGTCTTTTaGATTGACCAGAGTCACATG | + |
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Preference number: 2 (lower is better) Translates to: STPALLDINSKICHFDTHEIRVF*IDQSHM Trigger: CATGTGACTCTGGTCAATTCAAAAGACTCTTATTTC...GTGAGTATCAAAGTGGCATATTTTGGAATTGATGTCAAGCAATGCAGGTGTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380229.3 |
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| 3UTR-3UTR CCA 90 bp | AGTACACCTGCATTGCTTGACATCAATTCCAAAATATGCCACTTTGATACTCACGTCCATTCCTTGATTTaGTTCAGAAAACTAGTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: STPALLDINSKICHFDTHVHSLI*FRKLVF Trigger: AAACACTAGTTTTCTGAACCAAATCAAGGAATGGAC...GTGAGTATCAAAGTGGCATATTTTGGAATTGATGTCAAGCAATGCAGGTGTACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380229.3 |
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| 3UTR-3UTR CAA 90 bp | AGTACACCTGCATTGCTTGACATCAATTCCAAAATATGCCACTTTGATACTCACCGTCCATTCCTTGATTaGGTTCAGAAAACTAGTGTT | + |
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Preference number: 3 (lower is better) Translates to: STPALLDINSKICHFDTHRPFLD*VQKTSV Trigger: AACACTAGTTTTCTGAACCAAATCAAGGAATGGACG...GTGAGTATCAAAGTGGCATATTTTGGAATTGATGTCAAGCAATGCAGGTGTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380229.3 |
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| 3UTR-3UTR CAA 90 bp | GTACACCTGCATTGCTTGACATCAATTCCAAAATATGCCACTTTGATACTCACTATTACCGTCCATTCCTaGATTTGGTTCAGAAAACTA | + |
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Preference number: 3 (lower is better) Translates to: VHLHCLTSIPKYATLILTITVHS*IWFRKL Trigger: TAGTTTTCTGAACCAAATCAAGGAATGGACGGTAAT...AGTGAGTATCAAAGTGGCATATTTTGGAATTGATGTCAAGCAATGCAGGTGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380229.3 |
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| 3UTR TCA 72 bp | ATTGGTTACATGAGATATTTTGATACAGTCATGCAATaGGTACACCTGCATTGCTTGACATCAATTCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: IGYMRYFDTVMQ*VHLHCLTSIPK Trigger: TTTTGGAATTGATGTCAAGCAATGCAGGTGTACTCATTGCATGACTGTATCAAAATATCTCATGTAACCAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380229.3 |
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| CDS TCA 72 bp | TTTCATTTGTGTGTTCTCCCTATGACCTTAAGAGGATaGCAACAATCTATTAATTTTGCATTAGACTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: FHLCVLPMTLRG*QQSINFALDFS Trigger: GCTGAAGTCTAATGCAAAATTAATAGATTGTTGTCATCCTCTTAAGGTCATAGGGAGAACACACAAATGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380229.4 |
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