Pregenerated sensors for IFNK (Homo sapiens)
Ensembl gene IDs: ENSG00000147896Ensembl transcript IDs: ENST00000276943.3
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATAATCTTGAATCTGAACAGTTTGGCAGCATGCTGTTAGTGGCATaGGCAGGAAATGGCTTCCAAGGGCAGAACCAGGTACATTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: NNLESEQFGSMLLVA*AGNGFQGQNQVHFR Trigger: TCTGAAATGTACCTGGTTCTGCCCTTGGAAGCCATTTCCTGCTCATGCCACTAACAGCATGCTGCCAAACTGTTCAGATTCAAGATTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| 3UTR GCA 90 bp | CTCACTTTTATCATAAGACTTTCTTTGGCTATAACATTTGGGCCCTaGGCTTGGAATAATCTTGAATCTGAACAGTTTGGCAGCATGCTG | + |
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Preference number: 1 (lower is better) Translates to: LTFIIRLSLAITFGP*AWNNLESEQFGSML Trigger: CAGCATGCTGCCAAACTGTTCAGATTCAAGATTATTCCAAGCGCAGGGCCCAAATGTTATAGCCAAAGAAAGTCTTATGATAAAAGTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| 3UTR CCA 90 bp | TTTATCATAAGACTTTCTTTGGCTATAACATTTGGGCCCTGCGCTTaGAATAATCTTGAATCTGAACAGTTTGGCAGCATGCTGTTAGTG | + |
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Preference number: 1 (lower is better) Translates to: FIIRLSLAITFGPCA*NNLESEQFGSMLLV Trigger: CACTAACAGCATGCTGCCAAACTGTTCAGATTCAAGATTATTCCAAGCGCAGGGCCCAAATGTTATAGCCAAAGAAAGTCTTATGATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGATCCTTCTGCTGATAGCCTGCATATACCATGATCCACAATTTGTTCTTGGCATGAGCAGGAAATaGCTTCCAAGGGCAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: CLILLLIACIYHDPQFVLGMSRK*LPRAEP Trigger: TGGTTCTGCCCTTGGAAGCCATTTCCTGCTCATGCC...AAGAACAAATTGTGGATCATGGTATATGCAGGCTATCAGCAGAAGGATCAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| 3UTR-3UTR TCA 90 bp | CACTTTTATCATAAGACTTTCTTTGGCTATAACATTTGGGCCCTGCGCTTGGAAATGCTGTTAGTGGCATaGGCAGGAAATGGCTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: HFYHKTFFGYNIWALRLEMLLVA*AGNGFQ Trigger: TTGGAAGCCATTTCCTGCTCATGCCACTAACAGCAT...TTCCAAGCGCAGGGCCCAAATGTTATAGCCAAAGAAAGTCTTATGATAAAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| 3UTR CCA 72 bp | AGACTTTCTTTGGCTATAACATTTGGGCCCTGCGCTTaGAATAATCTTGAATCTGAACAGTTTGGCAGCATG | + |
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Preference number: 3 (lower is better) Translates to: RLSLAITFGPCA*NNLESEQFGSM Trigger: CATGCTGCCAAACTGTTCAGATTCAAGATTATTCCAAGCGCAGGGCCCAAATGTTATAGCCAAAGAAAGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| 3UTR GCA 72 bp | ATCATAAGACTTTCTTTGGCTATAACATTTGGGCCCTaGGCTTGGAATAATCTTGAATCTGAACAGTTTGGC | + |
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Preference number: 3 (lower is better) Translates to: IIRLSLAITFGP*AWNNLESEQFG Trigger: GCCAAACTGTTCAGATTCAAGATTATTCCAAGCGCAGGGCCCAAATGTTATAGCCAAAGAAAGTCTTATGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| 3UTR-3UTR CAA 90 bp | GCAAGTATATATTTTATGCTCAGTAGCTTGCATGTCCTAACTCCTTTACAAGCTGCGCTTGGAATAATCTaGAATCTGAACAGTTTGGCA | + |
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Preference number: 3 (lower is better) Translates to: ASIYFMLSSLHVLTPLQAALGII*NLNSLA Trigger: TGCCAAACTGTTCAGATTCAAGATTATTCCAAGCGC...AGCTTGTAAAGGAGTTAGGACATGCAAGCTACTGAGCATAAAATATATACTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| 3UTR GCA 72 bp | AACTCATTTTATTGTCTGATCCTTCTGCTGATAGCCTaGATATACCATGATCCACAATTTGTTCTTGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: NSFYCLILLLIA*IYHDPQFVLVL Trigger: AAGAACAAGAACAAATTGTGGATCATGGTATATGCAGGCTATCAGCAGAAGGATCAGACAATAAAATGAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR GCA 90 bp | CCCTGCGCTTGGAATAATCTTGAATCTGAACAGTTTGGCAGCATGCTGTTAGTGTCCTCAGTTCCAGGCTaGTCAGCTGGGGGACCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PCAWNNLESEQFGSMLLVSSVPG*SAGGPW Trigger: CCAGGGTCCCCCAGCTGAGCAGCCTGGAACTGAGGA...CACTAACAGCATGCTGCCAAACTGTTCAGATTCAAGATTATTCCAAGCGCAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CCA 90 bp | CCCTGCGCTTGGAATAATCTTGAATCTGAACAGTTTGGCAGCATGCTGTTAGTGGGCATGAGCAGGAAATaGCTTCCAAGGGCAGAACCA | + |
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Preference number: 4 (lower is better) Translates to: PCAWNNLESEQFGSMLLVGMSRK*LPRAEP Trigger: TGGTTCTGCCCTTGGAAGCCATTTCCTGCTCATGCC...CACTAACAGCATGCTGCCAAACTGTTCAGATTCAAGATTATTCCAAGCGCAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR TCA 90 bp | TGTCTGATCCTTCTGCTGATAGCCTGCATATACCATGATCCACAATTTGTTCTTGGGGACCCTGGCTTCTaGGGGTTTCATCTCATTCTC | + |
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Preference number: 4 (lower is better) Translates to: CLILLLIACIYHDPQFVLGDPGF*GFHLIL Trigger: GAGAATGAGATGAAACCCTCAGAAGCCAGGGTCCCC...AAGAACAAATTGTGGATCATGGTATATGCAGGCTATCAGCAGAAGGATCAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR GCA 90 bp | ACATTTGGGCCCTGCGCTTGGAATAATCTTGAATCTGAACAGTTTGGCAGCATGATAGGTTGGGTGTATTaGAGAAACTCTTGGGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: TFGPCAWNNLESEQFGSMIGWVY*RNSWGN Trigger: GTTGCCCCAAGAGTTTCTGCAATACACCCAACCTAT...CATGCTGCCAAACTGTTCAGATTCAAGATTATTCCAAGCGCAGGGCCCAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR TCA 90 bp | GGAAATGGCTTCCAAGGGCAGAACCAGGTACATTTCAGATATATTTCACCCTTTTCAGATTTTGCCAGGTaGCTCTTCTCAGGTGAACGT | + |
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Preference number: 4 (lower is better) Translates to: GNGFQGQNQVHFRYISPFSDFAR*LFSGER Trigger: ACGTTCACCTGAGAAGAGTCACCTGGCAAAATCTGA...AAAGGGTGAAATATATCTGAAATGTACCTGGTTCTGCCCTTGGAAGCCATTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR GCA 90 bp | ACATTTGGGCCCTGCGCTTGGAATAATCTTGAATCTGAACAGTTTGGCAGCATGTTGGTTCAGGTACTCTaGTTGCTGATCAAGTCCTAT | + |
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Preference number: 4 (lower is better) Translates to: TFGPCAWNNLESEQFGSMLVQVL*LLIKSY Trigger: ATAGGACTTGATCAGCAAGCAGAGTACCTGAACCAA...CATGCTGCCAAACTGTTCAGATTCAAGATTATTCCAAGCGCAGGGCCCAAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR GCA 90 bp | CCCTGCGCTTGGAATAATCTTGAATCTGAACAGTTTGGCAGCATGCTGTTAGTGCTTCTGCTGATAGCCTaGATATACCATGATCCACAA | + |
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Preference number: 4 (lower is better) Translates to: PCAWNNLESEQFGSMLLVLLLIA*IYHDPQ Trigger: TTGTGGATCATGGTATATGCAGGCTATCAGCAGAAG...CACTAACAGCATGCTGCCAAACTGTTCAGATTCAAGATTATTCCAAGCGCAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CCA 90 bp | ACATTTGGGCCCTGCGCTTGGAATAATCTTGAATCTGAACAGTTTGGCAGCATGTCCCTCTTCATAGGTTaGGTGTATTGCAGAAACTCT | + |
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Preference number: 4 (lower is better) Translates to: TFGPCAWNNLESEQFGSMSLFIG*VYCRNS Trigger: AGAGTTTCTGCAATACACCCAACCTATGAAGAGGGA...CATGCTGCCAAACTGTTCAGATTCAAGATTATTCCAAGCGCAGGGCCCAAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CCA 90 bp | GCAAGTATATATTTTATGCTCAGTAGCTTGCATGTCCTAACTCCTTTACAAGCTTCAGCTGGGGGACCCTaGCTTCTGAGGGTTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: ASIYFMLSSLHVLTPLQASAGGP*LLRVSS Trigger: AGATGAAACCCTCAGAAGCCAGGGTCCCCCAGCTGA...AGCTTGTAAAGGAGTTAGGACATGCAAGCTACTGAGCATAAAATATATACTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR GCA 90 bp | ACATTTGGGCCCTGCGCTTGGAATAATCTTGAATCTGAACAGTTTGGCAGCATGATAACATTTGGGCCCTaGGCTTGGAATAATCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: TFGPCAWNNLESEQFGSMITFGP*AWNNLE Trigger: TTCAAGATTATTCCAAGCGCAGGGCCCAAATGTTAT...CATGCTGCCAAACTGTTCAGATTCAAGATTATTCCAAGCGCAGGGCCCAAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CCA 90 bp | CACTTTTATCATAAGACTTTCTTTGGCTATAACATTTGGGCCCTGCGCTTGGAATCTTCCTCCAAGCATTaGTTCAGGTACTCTGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: HFYHKTFFGYNIWALRLESSSKH*FRYSAC Trigger: GCAAGCAGAGTACCTGAACCAATGCTTGGAGGAAGA...TTCCAAGCGCAGGGCCCAAATGTTATAGCCAAAGAAAGTCTTATGATAAAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR TCA 90 bp | ACTTTTATCATAAGACTTTCTTTGGCTATAACATTTGGGCCCTGCGCTTGGAATATGCTGTTAGTGGCATaGGCAGGAAATGGCTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: TFIIRLSLAITFGPCAWNMLLVA*AGNGFQ Trigger: TTGGAAGCCATTTCCTGCTCATGCCACTAACAGCAT...ATTCCAAGCGCAGGGCCCAAATGTTATAGCCAAAGAAAGTCTTATGATAAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR GCA 90 bp | ACATTTGGGCCCTGCGCTTGGAATAATCTTGAATCTGAACAGTTTGGCAGCATGCTACAGGAAATGAATTaGTCATACTACTCAGATGTC | + |
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Preference number: 4 (lower is better) Translates to: TFGPCAWNNLESEQFGSMLQEMN*SYYSDV Trigger: GACATCTGAGTAGTATGAGCAATTCATTTCCTGTAG...CATGCTGCCAAACTGTTCAGATTCAAGATTATTCCAAGCGCAGGGCCCAAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR TCA 90 bp | GGAAATGGCTTCCAAGGGCAGAACCAGGTACATTTCAGATATATTTCACCCTTTACATTCTACAGGAAATaGATTGCTCATACTACTCAG | + |
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Preference number: 4 (lower is better) Translates to: GNGFQGQNQVHFRYISPFTFYRK*IAHTTQ Trigger: CTGAGTAGTATGAGCAATTCATTTCCTGTAGAATGT...AAAGGGTGAAATATATCTGAAATGTACCTGGTTCTGCCCTTGGAAGCCATTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CCA 90 bp | CACTTTTATCATAAGACTTTCTTTGGCTATAACATTTGGGCCCTGCGCTTGGAATATTGCAGAAACTCTTaGGGCAACTCAAAAGCTATG | + |
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Preference number: 4 (lower is better) Translates to: HFYHKTFFGYNIWALRLEYCRNS*GNSKAM Trigger: CATAGCTTTTGAGTTGCCCCAAGAGTTTCTGCAATA...TTCCAAGCGCAGGGCCCAAATGTTATAGCCAAAGAAAGTCTTATGATAAAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CCA 90 bp | ACTTTTATCATAAGACTTTCTTTGGCTATAACATTTGGGCCCTGCGCTTGGAATTTTGGGCCCTGCGCTTaGAATAATCTTGAATCTGAA | + |
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Preference number: 4 (lower is better) Translates to: TFIIRLSLAITFGPCAWNFGPCA*NNLESE Trigger: TTCAGATTCAAGATTATTCCAAGCGCAGGGCCCAAA...ATTCCAAGCGCAGGGCCCAAATGTTATAGCCAAAGAAAGTCTTATGATAAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR TCA 90 bp | CATGTCCTAACTCCTTTACAAGCTTGTAGTACTATTTTTAATCTGGAACAACTCGTGACTCTTCTCAGGTaGACGTTCAGTAAGTTACAG | + |
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Preference number: 4 (lower is better) Translates to: HVLTPLQACSTIFNLEQLVTLLR*TFSKLQ Trigger: CTGTAACTTACTGAACGTTCACCTGAGAAGAGTCAC...GAGTTGTTCCAGATTAAAAATAGTACTACAAGCTTGTAAAGGAGTTAGGACATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CCA 90 bp | CACTTTTATCATAAGACTTTCTTTGGCTATAACATTTGGGCCCTGCGCTTGGAATCTCTTCTAACTTCTTaGCTGAAATTTGCCTCACTT | + |
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Preference number: 4 (lower is better) Translates to: HFYHKTFFGYNIWALRLESLLTS*LKFASL Trigger: AAGTGAGGCAAATTTCAGCCAAGAAGTTAGAAGAGA...TTCCAAGCGCAGGGCCCAAATGTTATAGCCAAAGAAAGTCTTATGATAAAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR TCA 90 bp | ACTTTTATCATAAGACTTTCTTTGGCTATAACATTTGGGCCCTGCGCTTGGAATAATACAAACATCTTCTaGTTTCCACTCGGACAATCT | + |
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Preference number: 4 (lower is better) Translates to: TFIIRLSLAITFGPCAWNNTNIF*FPLGQS Trigger: AGATTGTCCGAGTGGAAATCAGAAGATGTTTGTATT...ATTCCAAGCGCAGGGCCCAAATGTTATAGCCAAAGAAAGTCTTATGATAAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR TCA 90 bp | CATGTCCTAACTCCTTTACAAGCTTGTAGTACTATTTTTAATCTGGAACAACTCAGCCACAAACACTTTTaGATCATATCAGGTTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: HVLTPLQACSTIFNLEQLSHKHF*IISGLV Trigger: CACCAAACCTGATATGATTCAAAAGTGTTTGTGGCT...GAGTTGTTCCAGATTAAAAATAGTACTACAAGCTTGTAAAGGAGTTAGGACATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR TCA 90 bp | GCAAGTATATATTTTATGCTCAGTAGCTTGCATGTCCTAACTCCTTTACAAGCTCTATTTGGATTTGTTTaGGGTGTCTCTCTTTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: ASIYFMLSSLHVLTPLQALFGFV*GVSLSN Trigger: ATTGGAAAGAGAGACACCTCAAACAAATCCAAATAG...AGCTTGTAAAGGAGTTAGGACATGCAAGCTACTGAGCATAAAATATATACTTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CCA 90 bp | GCAAGTATATATTTTATGCTCAGTAGCTTGCATGTCCTAACTCCTTTACAAGCTAAATTGTCTATCCTGTaGAAATATCTCCTCAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: ASIYFMLSSLHVLTPLQAKLSIL*KYLLSS Trigger: GGAACTGAGGAGATATTTCCACAGGATAGACAATTT...AGCTTGTAAAGGAGTTAGGACATGCAAGCTACTGAGCATAAAATATATACTTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS GCA 90 bp | TCAGGAAATTGTCTATCCTGTGGAAATATCTCCTCAGTTCCAGGCTaGTCAGCTGGGGGACCCTGGCTTCTGAGGGTTTCATCTCATTCT | + |
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Preference number: 5 (lower is better) Translates to: SGNCLSCGNISSVPG*SAGGPWLLRVSSHS Trigger: AGAATGAGATGAAACCCTCAGAAGCCAGGGTCCCCCAGCTGAGCAGCCTGGAACTGAGGAGATATTTCCACAGGATAGACAATTTCCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS CCA 90 bp | TTGTCTATCCTGTGGAAATATCTCCTCAGTTCCAGGCTGCTCAGCTaGGGGACCCTGGCTTCTGAGGGTTTCATCTCATTCTCTTTCATT | + |
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Preference number: 5 (lower is better) Translates to: LSILWKYLLSSRLLS*GTLASEGFISFSFI Trigger: AATGAAAGAGAATGAGATGAAACCCTCAGAAGCCAGGGTCCCCCAGCTGAGCAGCCTGGAACTGAGGAGATATTTCCACAGGATAGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS CCA 90 bp | TGTGGAAATATCTCCTCAGTTCCAGGCTGCTCAGCTGGGGGACCCTaGCTTCTGAGGGTTTCATCTCATTCTCTTTCATTTCTTTCATGT | + |
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Preference number: 5 (lower is better) Translates to: CGNISSVPGCSAGGP*LLRVSSHSLSFLSC Trigger: ACATGAAAGAAATGAAAGAGAATGAGATGAAACCCTCAGAAGCCAGGGTCCCCCAGCTGAGCAGCCTGGAACTGAGGAGATATTTCCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS TCA 90 bp | ATACTACTCAGATGTCTCAGATTTTGCCAGGTGACTCTTCTCAGGTaGACGTTCAGTAAGTTACAGTCCAGGGATAGGGTGCCAGCAATG | + |
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Preference number: 5 (lower is better) Translates to: ILLRCLRFCQVTLLR*TFSKLQSRDRVPAM Trigger: CATTGCTGGCACCCTATCCCTGGACTGTAACTTACTGAACGTTCACCTGAGAAGAGTCACCTGGCAAAATCTGAGACATCTGAGTAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CAA 90 bp | GGAAATGGCTTCCAAGGGCAGAACCAGGTACATTTCAGATATATTTCACCCTTTCATAGGTTGGGTGTATaGCAGAAACTCTTGGGGCAA | + |
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Preference number: 5 (lower is better) Translates to: GNGFQGQNQVHFRYISPFHRLGV*QKLLGQ Trigger: TTGCCCCAAGAGTTTCTGCAATACACCCAACCTATG...AAAGGGTGAAATATATCTGAAATGTACCTGGTTCTGCCCTTGGAAGCCATTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CAA 90 bp | TGTCTGATCCTTCTGCTGATAGCCTGCATATACCATGATCCACAATTTGTTCTTGTCTTCCTCCAAGCATaGGTTCAGGTACTCTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: CLILLLIACIYHDPQFVLVFLQA*VQVLCL Trigger: CAAGCAGAGTACCTGAACCAATGCTTGGAGGAAGAC...AAGAACAAATTGTGGATCATGGTATATGCAGGCTATCAGCAGAAGGATCAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CAA 90 bp | CCCTGCGCTTGGAATAATCTTGAATCTGAACAGTTTGGCAGCATGCTGTTAGTGGCGCTTGGAATAATCTaGAATCTGAACAGTTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: PCAWNNLESEQFGSMLLVALGII*NLNSLA Trigger: TGCCAAACTGTTCAGATTCAAGATTATTCCAAGCGC...CACTAACAGCATGCTGCCAAACTGTTCAGATTCAAGATTATTCCAAGCGCAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CAA 90 bp | TGTCTGATCCTTCTGCTGATAGCCTGCATATACCATGATCCACAATTTGTTCTTGTCCCTCTTCATAGGTaGGGTGTATTGCAGAAACTC | + |
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Preference number: 5 (lower is better) Translates to: CLILLLIACIYHDPQFVLVPLHR*GVLQKL Trigger: GAGTTTCTGCAATACACCCAACCTATGAAGAGGGAC...AAGAACAAATTGTGGATCATGGTATATGCAGGCTATCAGCAGAAGGATCAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CAA 90 bp | TGTCTGATCCTTCTGCTGATAGCCTGCATATACCATGATCCACAATTTGTTCTTTGTTGGCTGAAGATGTaGAAGGCCTGTAGGGACATT | + |
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Preference number: 5 (lower is better) Translates to: CLILLLIACIYHDPQFVLCWLKM*KACRDI Trigger: AATGTCCCTACAGGCCTTCAACATCTTCAGCCAACA...AAGAACAAATTGTGGATCATGGTATATGCAGGCTATCAGCAGAAGGATCAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS TCA 90 bp | TCATTCTTGTCTTCCTCCAAGCATTGGTTCAGGTACTCTGCTTGCTaGTCAAGTCCTATTTGGATTTGTTTGAGGTGTCTCTCTTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: SFLSSSKHWFRYSAC*SSPIWICLRCLSFQ Trigger: TTGGAAAGAGAGACACCTCAAACAAATCCAAATAGGACTTGATCAGCAAGCAGAGTACCTGAACCAATGCTTGGAGGAAGACAAGAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CAA 90 bp | ACATTTGGGCCCTGCGCTTGGAATAATCTTGAATCTGAACAGTTTGGCAGCATGTCTACAGGAAATGAATaGCTCATACTACTCAGATGT | + |
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Preference number: 5 (lower is better) Translates to: TFGPCAWNNLESEQFGSMSTGNE*LILLRC Trigger: ACATCTGAGTAGTATGAGCAATTCATTTCCTGTAGA...CATGCTGCCAAACTGTTCAGATTCAAGATTATTCCAAGCGCAGGGCCCAAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CAA 90 bp | ACATTTGGGCCCTGCGCTTGGAATAATCTTGAATCTGAACAGTTTGGCAGCATGAAGTCCTATTTGGATTaGTTTGAGGTGTCTCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: TFGPCAWNNLESEQFGSMKSYLD*FEVSLF Trigger: AAAGAGAGACACCTCAAACAAATCCAAATAGGACTT...CATGCTGCCAAACTGTTCAGATTCAAGATTATTCCAAGCGCAGGGCCCAAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CAA 90 bp | ATAAGACTTTCTTTGGCTATAACATTTGGGCCCTGCGCTTGGAATAATCTTGAACTCTCTTTCCAATATTaGAAGGTGTGTTGGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: IRLSLAITFGPCAWNNLELSFQY*KVCWLK Trigger: CTTCAGCCAACACACCTTCAAATATTGGAAAGAGAG...TTCAAGATTATTCCAAGCGCAGGGCCCAAATGTTATAGCCAAAGAAAGTCTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CAA 90 bp | TGTCTGATCCTTCTGCTGATAGCCTGCATATACCATGATCCACAATTTGTTCTTCTGATCAAGTCCTATTaGGATTTGTTTGAGGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: CLILLLIACIYHDPQFVLLIKSY*DLFEVS Trigger: AGACACCTCAAACAAATCCAAATAGGACTTGATCAG...AAGAACAAATTGTGGATCATGGTATATGCAGGCTATCAGCAGAAGGATCAGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CAA 90 bp | CACTTTTATCATAAGACTTTCTTTGGCTATAACATTTGGGCCCTGCGCTTGGAAATCATAAGACTTTCTTaGGCTATAACATTTGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: HFYHKTFFGYNIWALRLEIIRLS*AITFGP Trigger: GGGCCCAAATGTTATAGCCAAAGAAAGTCTTATGAT...TTCCAAGCGCAGGGCCCAAATGTTATAGCCAAAGAAAGTCTTATGATAAAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CAA 90 bp | GCAAGTATATATTTTATGCTCAGTAGCTTGCATGTCCTAACTCCTTTACAAGCTGTATTGCAGAAACTCTaGGGGCAACTCAAAAGCTAT | + |
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Preference number: 5 (lower is better) Translates to: ASIYFMLSSLHVLTPLQAVLQKL*GQLKSY Trigger: ATAGCTTTTGAGTTGCCCCAAGAGTTTCTGCAATAC...AGCTTGTAAAGGAGTTAGGACATGCAAGCTACTGAGCATAAAATATATACTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CAA 90 bp | ATAAGACTTTCTTTGGCTATAACATTTGGGCCCTGCGCTTGGAATAATCTTGAACCTATTTGGATTTGTTaGAGGTGTCTCTCTTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: IRLSLAITFGPCAWNNLEPIWIC*RCLSFQ Trigger: TTGGAAAGAGAGACACCTCAAACAAATCCAAATAGG...TTCAAGATTATTCCAAGCGCAGGGCCCAAATGTTATAGCCAAAGAAAGTCTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CAA 90 bp | CATGTCCTAACTCCTTTACAAGCTTGTAGTACTATTTTTAATCTGGAACAACTCGTTCAGGTACTCTGCTaGCTGATCAAGTCCTATTTG | + |
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Preference number: 5 (lower is better) Translates to: HVLTPLQACSTIFNLEQLVQVLC*LIKSYL Trigger: CAAATAGGACTTGATCAGCAAGCAGAGTACCTGAAC...GAGTTGTTCCAGATTAAAAATAGTACTACAAGCTTGTAAAGGAGTTAGGACATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CAA 90 bp | ACTTTTATCATAAGACTTTCTTTGGCTATAACATTTGGGCCCTGCGCTTGGAATTCTTCATTTTCATTCTaGTCTTCCTCCAAGCATTGG | + |
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Preference number: 5 (lower is better) Translates to: TFIIRLSLAITFGPCAWNSSFSF*SSSKHW Trigger: CCAATGCTTGGAGGAAGACAAGAATGAAAATGAAGA...ATTCCAAGCGCAGGGCCCAAATGTTATAGCCAAAGAAAGTCTTATGATAAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CAA 90 bp | ATAAGACTTTCTTTGGCTATAACATTTGGGCCCTGCGCTTGGAATAATCTTGAATTTATGCTCAGTAGCTaGCATGTCCTAACTCCTTTA | + |
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Preference number: 5 (lower is better) Translates to: IRLSLAITFGPCAWNNLEFMLSS*HVLTPL Trigger: TAAAGGAGTTAGGACATGCAAGCTACTGAGCATAAA...TTCAAGATTATTCCAAGCGCAGGGCCCAAATGTTATAGCCAAAGAAAGTCTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS-3UTR CAA 90 bp | CATGTCCTAACTCCTTTACAAGCTTGTAGTACTATTTTTAATCTGGAACAACTCATATTTGAAGGTGTGTaGGCTGAAGATGTTGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: HVLTPLQACSTIFNLEQLIFEGV*AEDVEG Trigger: GCCTTCAACATCTTCAGCCAACACACCTTCAAATAT...GAGTTGTTCCAGATTAAAAATAGTACTACAAGCTTGTAAAGGAGTTAGGACATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS TCA 72 bp | AGATGTCTCAGATTTTGCCAGGTGACTCTTCTCAGGTaGACGTTCAGTAAGTTACAGTCCAGGGATAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RCLRFCQVTLLR*TFSKLQSRDRV Trigger: CACCCTATCCCTGGACTGTAACTTACTGAACGTTCACCTGAGAAGAGTCACCTGGCAAAATCTGAGACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS CAA 72 bp | TTCATAGAAGGCCTTCTTGATGTCCCTCTTCATAGGTaGGGTGTATTGCAGAAACTCTTGGGGCAACTCAAA | + |
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Preference number: 6 (lower is better) Translates to: FIEGLLDVPLHR*GVLQKLLGQLK Trigger: TTTGAGTTGCCCCAAGAGTTTCTGCAATACACCCAACCTATGAAGAGGGACATCAAGAAGGCCTTCTATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS CAA 72 bp | CTTGTCTTCCTCCAAGCATTGGTTCAGGTACTCTGCTaGCTGATCAAGTCCTATTTGGATTTGTTTGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: LVFLQALVQVLC*LIKSYLDLFEV Trigger: CACCTCAAACAAATCCAAATAGGACTTGATCAGCAAGCAGAGTACCTGAACCAATGCTTGGAGGAAGACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS GCA 72 bp | ATTCTTGTCTTCCTCCAAGCATTGGTTCAGGTACTCTaGTTGCTGATCAAGTCCTATTTGGATTTGTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: ILVFLQALVQVL*LLIKSYLDLFE Trigger: CTCAAACAAATCCAAATAGGACTTGATCAGCAAGCAGAGTACCTGAACCAATGCTTGGAGGAAGACAAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS CAA 90 bp | TCAAGTCCTATTTGGATTTGTTTGAGGTGTCTCTCTTTCCAATATTaGAAGGTGTGTTGGCTGAAGATGTTGAAGGCCTGTAGGGACATT | + |
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Preference number: 6 (lower is better) Translates to: SSPIWICLRCLSFQY*KVCWLKMLKACRDI Trigger: AATGTCCCTACAGGCCTTCAACATCTTCAGCCAACACACCTTCAAATATTGGAAAGAGAGACACCTCAAACAAATCCAAATAGGACTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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| CDS CAA 72 bp | CAGGTACTCTGCTTGCTGATCAAGTCCTATTTGGATTaGTTTGAGGTGTCTCTCTTTCCAATATTTGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: QVLCLLIKSYLD*FEVSLFPIFEG Trigger: ACCTTCAAATATTGGAAAGAGAGACACCTCAAACAAATCCAAATAGGACTTGATCAGCAAGCAGAGTACCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276943.3 |
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