RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IFNGR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000027697

Ensembl transcript IDs: ENST00000367739.9, ENST00000414770.5, ENST00000458076.5, ENST00000478333.1, ENST00000642390.1, ENST00000643119.1, ENST00000644894.1, ENST00000645045.1, ENST00000645753.1, ENST00000646036.1, ENST00000646898.1, ENST00000647124.1

Found 404 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTCTTCTGTATGTTCCACTTTTCCTGGATTGTCTTCGGTATGCATaGCTGGAACTGTTGCTGGAGACAACGGCTCTTCACAGACCACCT +
Preference number: 1 (lower is better)
Translates to: VLLYVPLFLDCLRYA*LELLLETTALHRPP
Trigger: AGGTGGTCTGTGAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATGCATACCGAAGACAATCCAGGAAAAGTGGAACATACAGAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR CCA 90 bp TTCTGTATGTTCCACTTTTCCTGGATTGTCTTCGGTATGCATGCCTaGAACTGTTGCTGGAGACAACGGCTCTTCACAGACCACCTCCTT +
Preference number: 1 (lower is better)
Translates to: FCMFHFSWIVFGMHA*NCCWRQRLFTDHLL
Trigger: AAGGAGGTGGTCTGTGAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATGCATACCGAAGACAATCCAGGAAAAGTGGAACATACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR GCA 90 bp GAAAGTTCTTCTGTATGTTCCACTTTTCCTGGATTGTCTTCGGTATaGATGCCTGGAACTGTTGCTGGAGACAACGGCTCTTCACAGACC +
Preference number: 1 (lower is better)
Translates to: ESSSVCSTFPGLSSV*MPGTVAGDNGSSQT
Trigger: GGTCTGTGAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATGCATACCGAAGACAATCCAGGAAAAGTGGAACATACAGAAGAACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR CCA 90 bp TTACTACTTAAAGGTGAAGAACTCTCTCTCTCTATTGGAGTCAGATaGCTGCCCGGGACCACGTCAGGAATATTTTCTTCAGTAGTCACC +
Preference number: 1 (lower is better)
Translates to: LLLKGEELSLSIGVR*LPGTTSGIFSSVVT
Trigger: GGTGACTACTGAAGAAAATATTCCTGACGTGGTCCCGGGCAGCCATCTGACTCCAATAGAGAGAGAGAGTTCTTCACCTTTAAGTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR GCA 90 bp CACTCTCAGAACAATTTCTGGAGTGATACGAGTTTAAAGCGATGCTaGCAGGTTCAGACTGGTTACTACTTAAAGGTGAAGAACTCTCTC +
Preference number: 1 (lower is better)
Translates to: HSQNNFWSDTSLKRC*QVQTGYYLKVKNSL
Trigger: GAGAGAGTTCTTCACCTTTAAGTAGTAACCAGTCTGAACCTGGCAGCATCGCTTTAAACTCGTATCACTCCAGAAATTGTTCTGAGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR CCA 90 bp CAGTATCAAAACCATTTCTGGAGTGATCACTCTCAGAACAATTTCTaGAGTGATACGAGTTTAAAGCGATGCTGCCAGGTTCAGACTGGT +
Preference number: 1 (lower is better)
Translates to: QYQNHFWSDHSQNNF*SDTSLKRCCQVQTG
Trigger: ACCAGTCTGAACCTGGCAGCATCGCTTTAAACTCGTATCACTCCAGAAATTGTTCTGAGAGTGATCACTCCAGAAATGGTTTTGATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR GCA 90 bp GATCACTCTCAGAACAATTTCTGGAGTGATACGAGTTTAAAGCGATaGTGCCAGGTTCAGACTGGTTACTACTTAAAGGTGAAGAACTCT +
Preference number: 1 (lower is better)
Translates to: DHSQNNFWSDTSLKR*CQVQTGYYLKVKNS
Trigger: AGAGTTCTTCACCTTTAAGTAGTAACCAGTCTGAACCTGGCAGCATCGCTTTAAACTCGTATCACTCCAGAAATTGTTCTGAGAGTGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR CCA 90 bp CTTAACACCATAGTTCTTTACCTCTACGGTAAAAACAGGGACCTGTaGCATGATCTGGTACTCCCAATATACGATAGGGTTCATGTTATA +
Preference number: 1 (lower is better)
Translates to: LNTIVLYLYGKNRDL*HDLVLPIYDRVHVI
Trigger: TATAACATGAACCCTATCGTATATTGGGAGTACCAGATCATGCCACAGGTCCCTGTTTTTACCGTAGAGGTAAAGAACTATGGTGTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR TCA 90 bp TTCGGGATCATAATCGACTTCCTGCTCGTCTCCATTTACAAAAACTaGAGGGTGAAATATGTCAATCATGATTTGCTTCTCCTCCTTTCT +
Preference number: 1 (lower is better)
Translates to: FGIIIDFLLVSIYKN*RVKYVNHDLLLLLS
Trigger: AGAAAGGAGGAGAAGCAAATCATGATTGACATATTTCACCCTTCAGTTTTTGTAAATGGAGACGAGCAGGAAGTCGATTATGATCCCGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR CCA 90 bp AGACTTCAAAGTTGGTGCAACTTAGCTGATCTCATGAAAATTCTTTaGAATCTTCTGTTGGTCTATAACCAATCAAGGACTCTTTACCGC +
Preference number: 1 (lower is better)
Translates to: RLQSWCNLADLMKIL*NLLLVYNQSRTLYR
Trigger: GCGGTAAAGAGTCCTTGATTGGTTATAGACCAACAGAAGATTCCAAAGAATTTTCATGAGATCAGCTAAGTTGCACCAACTTTGAAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR GCA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTCCCTGGGGCATCACCTaGTCACCTAGGAACCAGGAG +
Preference number: 2 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVPWGIT*SPRNQE
Trigger: CTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGG...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
3UTR-3UTR GCA 90 bp TGGCTGCCCGGGACCACGTCAGGAATATTTTCTTCAGTAGTCACCACTTCTGTTCATGCCTGGAACTGTTaGTGGAGACAACGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: WLPGTTSGIFSSVVTTSVHAWNC*WRQRLF
Trigger: GAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATG...AACAGAAGTGGTGACTACTGAAGAAAATATTCCTGACGTGGTCCCGGGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR CCA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTGGCTACAAAGGTCCCTaGGGCATCACCTGCTCACCT +
Preference number: 2 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVGYKGP*GITCSP
Trigger: AGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCC...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
3UTR-3UTR TCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTGTCACTCCATTTGGTTaGTACCAACTAAGATACAAT +
Preference number: 2 (lower is better)
Translates to: EVATKVPGASPAHLGTRSVTPFG*YQLRYN
Trigger: ATTGTATCTTAGTTGGTATCAACCAAATGGAGTGAC...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
3UTR-3UTR GCA 90 bp TACCGCTATCATCCACAAGTAGATCCACTAGCACATGTGGTTTATCATAACCAACCCTGGGGCATCACCTaGTCACCTAGGAACCAGGAG +
Preference number: 2 (lower is better)
Translates to: YRYHPQVDPLAHVVYHNQPWGIT*SPRNQE
Trigger: CTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGG...TTGGTTATGATAAACCACATGTGCTAGTGGATCTACTTGTGGATGATAGCGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR CCA 90 bp ACAGGTAGTTTCGGGATCATAATCGACTTCCTGCTCGTCTCCATTTACAAAAACGGCTACAAAGGTCCCTaGGGCATCACCTGCTCACCT +
Preference number: 2 (lower is better)
Translates to: TGSFGIIIDFLLVSIYKNGYKGP*GITCSP
Trigger: AGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCC...GTTTTTGTAAATGGAGACGAGCAGGAAGTCGATTATGATCCCGAAACTACCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR CCA 90 bp CATGCCTGGAACTGTTGCTGGAGACAACGGCTCTTCACAGACCACCTCCTTTTCACCTGTGGCATGATCTaGTACTCCCAATATACGATA +
Preference number: 2 (lower is better)
Translates to: HAWNCCWRQRLFTDHLLFTCGMI*YSQYTI
Trigger: TATCGTATATTGGGAGTACCAGATCATGCCACAGGT...GAAAAGGAGGTGGTCTGTGAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR GCA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGCCCTGGGGCATCACCTaGTCACCTAGGAACCAGGAG +
Preference number: 2 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKPWGIT*SPRNQE
Trigger: CTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGG...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
3UTR-3UTR TCA 90 bp TGGCTGCCCGGGACCACGTCAGGAATATTTTCTTCAGTAGTCACCACTTCTGTTGTAGGCACTAAAGATTaGACAATGGAGCCACACATT +
Preference number: 2 (lower is better)
Translates to: WLPGTTSGIFSSVVTTSVVGTKD*TMEPHI
Trigger: AATGTGTGGCTCCATTGTTCAATCTTTAGTGCCTAC...AACAGAAGTGGTGACTACTGAAGAAAATATTCCTGACGTGGTCCCGGGCAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR GCA 90 bp ACAGGTAGTTTCGGGATCATAATCGACTTCCTGCTCGTCTCCATTTACAAAAACGTTTCATCAACACTCTaGTCTCTGGGGTGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: TGSFGIIIDFLLVSIYKNVSSTL*SLGCAG
Trigger: CCCTGCACACCCCAGAGAGCAGAGTGTTGATGAAAC...GTTTTTGTAAATGGAGACGAGCAGGAAGTCGATTATGATCCCGAAACTACCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR CCA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGGGCTACAAAGGTCCCTaGGGCATCACCTGCTCACCT +
Preference number: 2 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKGYKGP*GITCSP
Trigger: AGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCC...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
3UTR CAA 90 bp GTTCAGACTGGTTACTACTTAAAGGTGAAGAACTCTCTCTCTCTATaGGAGTCAGATGGCTGCCCGGGACCACGTCAGGAATATTTTCTT +
Preference number: 2 (lower is better)
Translates to: VQTGYYLKVKNSLSL*ESDGCPGPRQEYFL
Trigger: AAGAAAATATTCCTGACGTGGTCCCGGGCAGCCATCTGACTCCAATAGAGAGAGAGAGTTCTTCACCTTTAAGTAGTAACCAGTCTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR TCA 90 bp AAAGTTCTTCTGTATGTTCCACTTTTCCTGGATTGTCTTCGGTATGCATGCCTGCAGGGACCTGTGGCATaGTCTGGTACTCCCAATATA +
Preference number: 2 (lower is better)
Translates to: KVLLYVPLFLDCLRYACLQGPVA*SGTPNI
Trigger: TATATTGGGAGTACCAGATCATGCCACAGGTCCCTG...CAGGCATGCATACCGAAGACAATCCAGGAAAAGTGGAACATACAGAAGAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR CCA 90 bp GGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTCTAAGTCACTCCATTTaGTTGATACCAACTAAGATA +
Preference number: 2 (lower is better)
Translates to: GASPAHLGTRSTGYCSVTLSHSI*LIPTKI
Trigger: TATCTTAGTTGGTATCAACCAAATGGAGTGACTTAG...AGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
3UTR-3UTR CCA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTAGGAACCAGGAGTACTaGATACTGTTCCGTTACTGG +
Preference number: 2 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVRNQEY*ILFRYW
Trigger: CCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCT...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
3UTR-3UTR CCA 90 bp CTCGTCACAATCATCTTCCTTCTGCGTGAGTATTTTATACTGGATCTCACTTCCCAACACTCTGCTCTCTaGGGTGTGCAGGGCTTTTTA +
Preference number: 2 (lower is better)
Translates to: LVTIIFLLREYFILDLTSQHSAL*GVQGFL
Trigger: TAAAAAGCCCTGCACACCCCAGAGAGCAGAGTGTTG...GGAAGTGAGATCCAGTATAAAATACTCACGCAGAAGGAAGATGATTGTGACGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR CAA 90 bp TCTGTTATACTAGAAAGTTCTTCTGTATGTTCCACTTTTCCTGGATaGTCTTCGGTATGCATGCCTGGAACTGTTGCTGGAGACAACGGC +
Preference number: 2 (lower is better)
Translates to: SVILESSSVCSTFPG*SSVCMPGTVAGDNG
Trigger: GCCGTTGTCTCCAGCAACAGTTCCAGGCATGCATACCGAAGACAATCCAGGAAAAGTGGAACATACAGAAGAACTTTCTAGTATAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR TCA 90 bp TACCGCTATCATCCACAAGTAGATCCACTAGCACATGTGGTTTATCATAACCAACAGGGACCTGTGGCATaGTCTGGTACTCCCAATATA +
Preference number: 2 (lower is better)
Translates to: YRYHPQVDPLAHVVYHNQQGPVA*SGTPNI
Trigger: TATATTGGGAGTACCAGATCATGCCACAGGTCCCTG...TTGGTTATGATAAACCACATGTGCTAGTGGATCTACTTGTGGATGATAGCGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR CCA 90 bp AAAGTTCTTCTGTATGTTCCACTTTTCCTGGATTGTCTTCGGTATGCATGCCTGAGGAACCAGGAGTACTaGATACTGTTCCGTTACTGG +
Preference number: 2 (lower is better)
Translates to: KVLLYVPLFLDCLRYACLRNQEY*ILFRYW
Trigger: CCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCT...CAGGCATGCATACCGAAGACAATCCAGGAAAAGTGGAACATACAGAAGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR TCA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTGCTGAAACACAGTACTaGGAATTCAGTGAGGATACT +
Preference number: 2 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVAETQY*EFSEDT
Trigger: AGTATCCTCACTGAATTCTCAGTACTGTGTTTCAGC...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR CCA 90 bp TGGCTGCCCGGGACCACGTCAGGAATATTTTCTTCAGTAGTCACCACTTCTGTTCTAAGTCACTCCATTTaGTTGATACCAACTAAGATA +
Preference number: 2 (lower is better)
Translates to: WLPGTTSGIFSSVVTTSVLSHSI*LIPTKI
Trigger: TATCTTAGTTGGTATCAACCAAATGGAGTGACTTAG...AACAGAAGTGGTGACTACTGAAGAAAATATTCCTGACGTGGTCCCGGGCAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR CCA 90 bp AGTCACCACTTCTGTTATACTAGAAAGTTCTTCTGTATGTTCCACTTTTCCTGGCAACACTCTGCTCTCTaGGGTGTGCAGGGCTTTTTA +
Preference number: 2 (lower is better)
Translates to: SHHFCYTRKFFCMFHFSWQHSAL*GVQGFL
Trigger: TAAAAAGCCCTGCACACCCCAGAGAGCAGAGTGTTG...CCAGGAAAAGTGGAACATACAGAAGAACTTTCTAGTATAACAGAAGTGGTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR TCA 90 bp TTTCGGGATCATAATCGACTTCCTGCTCGTCTCCATTTACAAAAACTGAAGGGTGACCCAAAGAGAATTTaGTGGATCACCAACATGATC +
Preference number: 2 (lower is better)
Translates to: FRDHNRLPARLHLQKLKGDPKRI*WITNMI
Trigger: GATCATGTTGGTGATCCATCAAATTCTCTTTGGGTC...ACCCTTCAGTTTTTGTAAATGGAGACGAGCAGGAAGTCGATTATGATCCCGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR TCA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTCATCTTCCTTCTGCGTaGGTATTTTATACTGGATCT +
Preference number: 2 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVHLPSA*VFYTGS
Trigger: AGATCCAGTATAAAATACTCACGCAGAAGGAAGATG...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR TCA 90 bp ACTCTTTACCGCTATCATCCACAAGTAGATCCACTAGCACATGTGGTTTATCATATCGCTAACTGGCACTaGATCTCGTCACAATCATCT +
Preference number: 2 (lower is better)
Translates to: TLYRYHPQVDPLAHVVYHIANWH*ISSQSS
Trigger: AGATGATTGTGACGAGATTCAGTGCCAGTTAGCGAT...ATGATAAACCACATGTGCTAGTGGATCTACTTGTGGATGATAGCGGTAAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR CCA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGAGGAACCAGGAGTACTaGATACTGTTCCGTTACTGG +
Preference number: 2 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKRNQEY*ILFRYW
Trigger: CCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCT...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
3UTR-3UTR CCA 90 bp ACAGGTAGTTTCGGGATCATAATCGACTTCCTGCTCGTCTCCATTTACAAAAACACCTGTGGCATGATCTaGTACTCCCAATATACGATA +
Preference number: 2 (lower is better)
Translates to: TGSFGIIIDFLLVSIYKNTCGMI*YSQYTI
Trigger: TATCGTATATTGGGAGTACCAGATCATGCCACAGGT...GTTTTTGTAAATGGAGACGAGCAGGAAGTCGATTATGATCCCGAAACTACCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR TCA 90 bp TTTCGGGATCATAATCGACTTCCTGCTCGTCTCCATTTACAAAAACTGAAGGGTGTCACTCCATTTGGTTaGTACCAACTAAGATACAAT +
Preference number: 2 (lower is better)
Translates to: FRDHNRLPARLHLQKLKGVTPFG*YQLRYN
Trigger: ATTGTATCTTAGTTGGTATCAACCAAATGGAGTGAC...ACCCTTCAGTTTTTGTAAATGGAGACGAGCAGGAAGTCGATTATGATCCCGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR TCA 90 bp CTAGCACATGTGGTTTATCATAACCAAAGGAGGTGGGGGCTTTTATTACGGTTAAAACCATTTCTGGAGTaGTCACTCTCAGAACAATTT +
Preference number: 2 (lower is better)
Translates to: LAHVVYHNQRRWGLLLRLKPFLE*SLSEQF
Trigger: AAATTGTTCTGAGAGTGATCACTCCAGAAATGGTTT...TAACCGTAATAAAAGCCCCCACCTCCTTTGGTTATGATAAACCACATGTGCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR CCA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTCTAAGTCACTCCATTTaGTTGATACCAACTAAGATA +
Preference number: 2 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVLSHSI*LIPTKI
Trigger: TATCTTAGTTGGTATCAACCAAATGGAGTGACTTAG...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
3UTR-3UTR CCA 90 bp GAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGCTAAGTCACTCCATTTaGTTGATACCAACTAAGATA +
Preference number: 2 (lower is better)
Translates to: EPGVLDTVPLLVTYLDVKLSHSI*LIPTKI
Trigger: TATCTTAGTTGGTATCAACCAAATGGAGTGACTTAG...CTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
3UTR-3UTR CCA 90 bp CTCGTCACAATCATCTTCCTTCTGCGTGAGTATTTTATACTGGATCTCACTTCCCTAAAGATTGAACAATaGAGCCACACATTCCAGTTT +
Preference number: 2 (lower is better)
Translates to: LVTIIFLLREYFILDLTSLKIEQ*SHTFQF
Trigger: AAACTGGAATGTGTGGCTCCATTGTTCAATCTTTAG...GGAAGTGAGATCCAGTATAAAATACTCACGCAGAAGGAAGATGATTGTGACGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR CCA 90 bp TATAACCAATCAAGGACTCTTTACCGCTATCATCCACAAGTAGATCCACTAGCATCTAAGGAAAATGGCTaGTATGACGTGATGAGTGAT +
Preference number: 2 (lower is better)
Translates to: YNQSRTLYRYHPQVDPLASKENG*YDVMSD
Trigger: ATCACTCATCACGTCATACCAGCCATTTTCCTTAGA...TGCTAGTGGATCTACTTGTGGATGATAGCGGTAAAGAGTCCTTGATTGGTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR CAA 90 bp TGGTGCAACTTAGCTGATCTCATGAAAATTCTTTGGAATCTTCTGTaGGTCTATAACCAATCAAGGACTCTTTACCGCTATCATCCACAA +
Preference number: 2 (lower is better)
Translates to: WCNLADLMKILWNLL*VYNQSRTLYRYHPQ
Trigger: TTGTGGATGATAGCGGTAAAGAGTCCTTGATTGGTTATAGACCAACAGAAGATTCCAAAGAATTTTCATGAGATCAGCTAAGTTGCACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR CCA 90 bp CTAGCACATGTGGTTTATCATAACCAAAGGAGGTGGGGGCTTTTATTACGGTTATCTCAGAACAATTTCTaGAGTGATACGAGTTTAAAG +
Preference number: 2 (lower is better)
Translates to: LAHVVYHNQRRWGLLLRLSQNNF*SDTSLK
Trigger: CTTTAAACTCGTATCACTCCAGAAATTGTTCTGAGA...TAACCGTAATAAAAGCCCCCACCTCCTTTGGTTATGATAAACCACATGTGCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR TCA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGGTCACTCCATTTGGTTaGTACCAACTAAGATACAAT +
Preference number: 2 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKVTPFG*YQLRYN
Trigger: ATTGTATCTTAGTTGGTATCAACCAAATGGAGTGAC...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
3UTR-3UTR TCA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGAAACCATTTCTGGAGTaGTCACTCTCAGAACAATTT +
Preference number: 2 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKKPFLE*SLSEQF
Trigger: AAATTGTTCTGAGAGTGATCACTCCAGAAATGGTTT...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR TCA 90 bp AAATTCTTTGGAATCTTCTGTTGGTCTATAACCAATCAAGGACTCTTTACCGCTGTCACTCCATTTGGTTaGTACCAACTAAGATACAAT +
Preference number: 2 (lower is better)
Translates to: KFFGIFCWSITNQGLFTAVTPFG*YQLRYN
Trigger: ATTGTATCTTAGTTGGTATCAACCAAATGGAGTGAC...AGCGGTAAAGAGTCCTTGATTGGTTATAGACCAACAGAAGATTCCAAAGAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR TCA 90 bp TGCAACTTAGCTGATCTCATGAAAATTCTTTGGAATCTTCTGTTGGTCTATAACGAACAATTTCTGGAGTaGTACGAGTTTAAAGCGATG +
Preference number: 2 (lower is better)
Translates to: CNLADLMKILWNLLLVYNEQFLE*YEFKAM
Trigger: CATCGCTTTAAACTCGTATCACTCCAGAAATTGTTC...GTTATAGACCAACAGAAGATTCCAAAGAATTTTCATGAGATCAGCTAAGTTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR CCA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGCTAAGTCACTCCATTTaGTTGATACCAACTAAGATA +
Preference number: 2 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKLSHSI*LIPTKI
Trigger: TATCTTAGTTGGTATCAACCAAATGGAGTGACTTAG...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
3UTR GCA 72 bp TCCTGGATTGTCTTCGGTATGCATGCCTGGAACTGTTaGTGGAGACAACGGCTCTTCACAGACCACCTCCTT +
Preference number: 3 (lower is better)
Translates to: SWIVFGMHAWNC*WRQRLFTDHLL
Trigger: AAGGAGGTGGTCTGTGAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATGCATACCGAAGACAATCCAGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR CCA 72 bp TGGATTGTCTTCGGTATGCATGCCTGGAACTGTTGCTaGAGACAACGGCTCTTCACAGACCACCTCCTTTTC +
Preference number: 3 (lower is better)
Translates to: WIVFGMHAWNCC*RQRLFTDHLLF
Trigger: GAAAAGGAGGTGGTCTGTGAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATGCATACCGAAGACAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR CAA 90 bp CTCTCTCTCTATTGGAGTCAGATGGCTGCCCGGGACCACGTCAGGAATATTTTCTCCACTTTTCCTGGATaGTCTTCGGTATGCATGCCT +
Preference number: 3 (lower is better)
Translates to: LSLYWSQMAARDHVRNIFSTFPG*SSVCMP
Trigger: AGGCATGCATACCGAAGACAATCCAGGAAAAGTGGA...GAAAATATTCCTGACGTGGTCCCGGGCAGCCATCTGACTCCAATAGAGAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR CCA 72 bp TTCCACTTTTCCTGGATTGTCTTCGGTATGCATGCCTaGAACTGTTGCTGGAGACAACGGCTCTTCACAGAC +
Preference number: 3 (lower is better)
Translates to: FHFSWIVFGMHA*NCCWRQRLFTD
Trigger: GTCTGTGAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATGCATACCGAAGACAATCCAGGAAAAGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR GCA 72 bp TATGTTCCACTTTTCCTGGATTGTCTTCGGTATGCATaGCTGGAACTGTTGCTGGAGACAACGGCTCTTCAC +
Preference number: 3 (lower is better)
Translates to: YVPLFLDCLRYA*LELLLETTALH
Trigger: GTGAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATGCATACCGAAGACAATCCAGGAAAAGTGGAACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR GCA 72 bp TCTGTATGTTCCACTTTTCCTGGATTGTCTTCGGTATaGATGCCTGGAACTGTTGCTGGAGACAACGGCTCT +
Preference number: 3 (lower is better)
Translates to: SVCSTFPGLSSV*MPGTVAGDNGS
Trigger: AGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATGCATACCGAAGACAATCCAGGAAAAGTGGAACATACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR CAA 90 bp GGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTAGTCACTCCATTTGGTaGATACCAACTAAGATACAA +
Preference number: 3 (lower is better)
Translates to: GASPAHLGTRSTGYCSVTSHSIW*IPTKIQ
Trigger: TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACT...AGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
3UTR-3UTR CAA 90 bp TGGCTGCCCGGGACCACGTCAGGAATATTTTCTTCAGTAGTCACCACTTCTGTTATAGGCAGATTCTTTTaGTCCAACCCTGGCTTTAAC +
Preference number: 3 (lower is better)
Translates to: WLPGTTSGIFSSVVTTSVIGRFF*SNPGFN
Trigger: GTTAAAGCCAGGGTTGGACAAAAAGAATCTGCCTAT...AACAGAAGTGGTGACTACTGAAGAAAATATTCCTGACGTGGTCCCGGGCAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR CCA 72 bp AGCCACACATTCCAGTTTCATCAACACTCTGCTCTCTaGGGTGTGCAGGGCTTTTTACAAAACATACCCAAC +
Preference number: 3 (lower is better)
Translates to: SHTFQFHQHSAL*GVQGFLQNIPN
Trigger: GTTGGGTATGTTTTGTAAAAAGCCCTGCACACCCCAGAGAGCAGAGTGTTGATGAAACTGGAATGTGTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR CCA 72 bp AAAGGTGAAGAACTCTCTCTCTCTATTGGAGTCAGATaGCTGCCCGGGACCACGTCAGGAATATTTTCTTCA +
Preference number: 3 (lower is better)
Translates to: KGEELSLSIGVR*LPGTTSGIFSS
Trigger: TGAAGAAAATATTCCTGACGTGGTCCCGGGCAGCCATCTGACTCCAATAGAGAGAGAGAGTTCTTCACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR TCA 72 bp GAATTCAGTGAGGATACTGGAATCGCTAACTGGCACTaGATCTCGTCACAATCATCTTCCTTCTGCGTGAGT +
Preference number: 3 (lower is better)
Translates to: EFSEDTGIANWH*ISSQSSSFCVS
Trigger: ACTCACGCAGAAGGAAGATGATTGTGACGAGATTCAGTGCCAGTTAGCGATTCCAGTATCCTCACTGAATTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR TCA 72 bp CACACATGTAAGACTCCTTCTGCTGAAACACAGTACTaGGAATTCAGTGAGGATACTGGAATCGCTAACTGG +
Preference number: 3 (lower is better)
Translates to: HTCKTPSAETQY*EFSEDTGIANW
Trigger: CCAGTTAGCGATTCCAGTATCCTCACTGAATTCTCAGTACTGTGTTTCAGCAGAAGGAGTCTTACATGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR TCA 72 bp GGCACTGAATCTCGTCACAATCATCTTCCTTCTGCGTaGGTATTTTATACTGGATCTCACTTCCGTTCATTC +
Preference number: 3 (lower is better)
Translates to: GTESRHNHLPSA*VFYTGSHFRSF
Trigger: GAATGAACGGAAGTGAGATCCAGTATAAAATACTCACGCAGAAGGAAGATGATTGTGACGAGATTCAGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR GCA 72 bp CAGAACAATTTCTGGAGTGATACGAGTTTAAAGCGATaGTGCCAGGTTCAGACTGGTTACTACTTAAAGGTG +
Preference number: 3 (lower is better)
Translates to: QNNFWSDTSLKR*CQVQTGYYLKV
Trigger: CACCTTTAAGTAGTAACCAGTCTGAACCTGGCAGCATCGCTTTAAACTCGTATCACTCCAGAAATTGTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR CCA 72 bp ATAGTTCTTTACCTCTACGGTAAAAACAGGGACCTGTaGCATGATCTGGTACTCCCAATATACGATAGGGTT +
Preference number: 3 (lower is better)
Translates to: IVLYLYGKNRDL*HDLVLPIYDRV
Trigger: AACCCTATCGTATATTGGGAGTACCAGATCATGCCACAGGTCCCTGTTTTTACCGTAGAGGTAAAGAACTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR CCA 72 bp AACCATTTCTGGAGTGATCACTCTCAGAACAATTTCTaGAGTGATACGAGTTTAAAGCGATGCTGCCAGGTT +
Preference number: 3 (lower is better)
Translates to: NHFWSDHSQNNF*SDTSLKRCCQV
Trigger: AACCTGGCAGCATCGCTTTAAACTCGTATCACTCCAGAAATTGTTCTGAGAGTGATCACTCCAGAAATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR GCA 72 bp AACAATTTCTGGAGTGATACGAGTTTAAAGCGATGCTaGCAGGTTCAGACTGGTTACTACTTAAAGGTGAAG +
Preference number: 3 (lower is better)
Translates to: NNFWSDTSLKRC*QVQTGYYLKVK
Trigger: CTTCACCTTTAAGTAGTAACCAGTCTGAACCTGGCAGCATCGCTTTAAACTCGTATCACTCCAGAAATTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR CAA 90 bp GAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGAGTCACTCCATTTGGTaGATACCAACTAAGATACAA +
Preference number: 3 (lower is better)
Translates to: EPGVLDTVPLLVTYLDVKSHSIW*IPTKIQ
Trigger: TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACT...CTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
3UTR-3UTR CAA 90 bp ACAGGTAGTTTCGGGATCATAATCGACTTCCTGCTCGTCTCCATTTACAAAAACAGTCACTCCATTTGGTaGATACCAACTAAGATACAA +
Preference number: 3 (lower is better)
Translates to: TGSFGIIIDFLLVSIYKNSHSIW*IPTKIQ
Trigger: TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACT...GTTTTTGTAAATGGAGACGAGCAGGAAGTCGATTATGATCCCGAAACTACCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR CAA 90 bp CTAGAAAGTTCTTCTGTATGTTCCACTTTTCCTGGATTGTCTTCGGTATGCATGAGTCACTCCATTTGGTaGATACCAACTAAGATACAA +
Preference number: 3 (lower is better)
Translates to: LESSSVCSTFPGLSSVCMSHSIW*IPTKIQ
Trigger: TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACT...CATGCATACCGAAGACAATCCAGGAAAAGTGGAACATACAGAAGAACTTTCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR CAA 90 bp AAATTCTTTGGAATCTTCTGTTGGTCTATAACCAATCAAGGACTCTTTACCGCTATAGGCAGATTCTTTTaGTCCAACCCTGGCTTTAAC +
Preference number: 3 (lower is better)
Translates to: KFFGIFCWSITNQGLFTAIGRFF*SNPGFN
Trigger: GTTAAAGCCAGGGTTGGACAAAAAGAATCTGCCTAT...AGCGGTAAAGAGTCCTTGATTGGTTATAGACCAACAGAAGATTCCAAAGAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR-3UTR CAA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGAGTCACTCCATTTGGTaGATACCAACTAAGATACAA +
Preference number: 3 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKSHSIW*IPTKIQ
Trigger: TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACT...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
3UTR TCA 72 bp ATAATCGACTTCCTGCTCGTCTCCATTTACAAAAACTaGAGGGTGAAATATGTCAATCATGATTTGCTTCTC +
Preference number: 3 (lower is better)
Translates to: IIDFLLVSIYKN*RVKYVNHDLLL
Trigger: GAGAAGCAAATCATGATTGACATATTTCACCCTTCAGTTTTTGTAAATGGAGACGAGCAGGAAGTCGATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
3UTR CCA 72 bp AGTTGGTGCAACTTAGCTGATCTCATGAAAATTCTTTaGAATCTTCTGTTGGTCTATAACCAATCAAGGACT +
Preference number: 3 (lower is better)
Translates to: SWCNLADLMKIL*NLLLVYNQSRT
Trigger: AGTCCTTGATTGGTTATAGACCAACAGAAGATTCCAAAGAATTTTCATGAGATCAGCTAAGTTGCACCAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp AGTGAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGGCTACCGACGGTCGCTaGCTCCAACCCCGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: SEVATKVPGASPAHLGTRATDGR*LQPRAP
Trigger: AGGCGCTCGGGGTTGGAGCCAGCGACCGTCGGTAGC...CCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367739.9
CDS-3UTR GCA 90 bp GTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGCCCCAGATCCGCGGTaGCCATCTCAGCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VATKVPGASPAHLGTRSTAPDPR*PSQPCS
Trigger: TGAGCAGGGCTGAGATGGGCACCGCGGATCTGGGGC...AGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367739.9
ENST00000643119.1
ENST00000645045.1
CDS-3UTR GCA 90 bp GTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTCCCTGGGGCATCACCTaGTCACCTAGGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: VATKVPGASPAHLGTRSTPWGIT*SPRNQE
Trigger: CTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGG...AGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp AGTGAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGCCCTGGGGCATCACCTaGTCACCTAGGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: SEVATKVPGASPAHLGTRPWGIT*SPRNQE
Trigger: CTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGG...CCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTTTGGAGTCAGATGGCTaGCCGGGACCACGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSLESDG*PGPRQE
Trigger: TTCCTGACGTGGTCCCGGGCAGCCATCTGACTCCAA...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp AGTGAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGTTGGAGTCAGATGGCTaGCCGGGACCACGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: SEVATKVPGASPAHLGTRLESDG*PGPRQE
Trigger: TTCCTGACGTGGTCCCGGGCAGCCATCTGACTCCAA...CCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTGGCTACAAAGGTCCCTaGGGCATCACCTGCTCACCT +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSGYKGP*GITCSP
Trigger: AGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCC...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp AGTGAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGCGGCGTGATTTGTTGTaGCGGCAACCAGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SEVATKVPGASPAHLGTRRRDLL*RQPGKR
Trigger: CCTCTTCCCTGGTTGCCGCCACAACAAATCACGCCG...CCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642390.1
ENST00000644894.1
ENST00000646036.1
ENST00000646898.1
CDS-3UTR TCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTTGCTCACACCCTGCATaGCAAGGGGTAGGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSCSHPA*QGVGER
Trigger: TCTTTCTCCTACCCCTTGTCATGCAGGGTGTGAGCA...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367739.9
CDS-3UTR TCA 90 bp CCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTAAGTTGGTGTAGGCACTaGGGACGGCCCCAGATCCGC +
Preference number: 4 (lower is better)
Translates to: PAHLGTRSTGYCSVTGNLSWCRH*GRPQIR
Trigger: GCGGATCTGGGGCCGTCCTCAGTGCCTACACCAACT...TAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367739.9
CDS-3UTR TCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTGAAAAACAAGCGGCGTaGTTTGTTGTGGCGGCAACC +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSEKQAA*FVVAAT
Trigger: GGTTGCCGCCACAACAAATCACGCCGCTTGTTTTTC...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642390.1
ENST00000644894.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp GGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGAAAGAGGAGAGCCATaGTGCTACCGACGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: GASPAHLGTRSTGYCSVTERGEP*CYRRSL
Trigger: CAGCGACCGTCGGTAGCAGCATGGCTCTCCTCTTTC...AGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367739.9
CDS-3UTR GCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTCATGCCTGGAACTGTTaGTGGAGACAACGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSHAWNC*WRQRLF
Trigger: GAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATG...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp AGTGAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGGCCTGGAACTGTTGCTaGAGACAACGGCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: SEVATKVPGASPAHLGTRAWNCC*RQRLFT
Trigger: TGTGAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGC...CCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp AGTGAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGACTCTCTCTCTCTATTaGAGTCAGATGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: SEVATKVPGASPAHLGTRTLSLY*SQMAAR
Trigger: CCGGGCAGCCATCTGACTCCAATAGAGAGAGAGAGT...CCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGGCTACAAAGGTCCCTaGGGCATCACCTGCTCACCT +
Preference number: 4 (lower is better)
Translates to: GASPAHLGTRSTGYCSVTGYKGP*GITCSP
Trigger: AGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCC...AGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTTGTCTTCGGTATGCATaGCTGGAACTGTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSCLRYA*LELLLE
Trigger: CTCCAGCAACAGTTCCAGGCATGCATACCGAAGACA...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp GTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTTGTCTTCGGTATGCATaGCTGGAACTGTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VATKVPGASPAHLGTRSTCLRYA*LELLLE
Trigger: CTCCAGCAACAGTTCCAGGCATGCATACCGAAGACA...AGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTTCTATTGGAGTCAGATaGCTGCCCGGGACCACGTCA +
Preference number: 4 (lower is better)
Translates to: GASPAHLGTRSTGYCSVTSIGVR*LPGTTS
Trigger: TGACGTGGTCCCGGGCAGCCATCTGACTCCAATAGA...AGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTGATGGAGATCCGTTCTaGGAAATGGAGAAATGTCCC +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSDGDPF*EMEKCP
Trigger: GGGACATTTCTCCATTTCTCAGAACGGATCTCCATC...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644894.1
ENST00000646898.1
CDS-3UTR GCA 90 bp GGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTCATGCCTGGAACTGTTaGTGGAGACAACGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GASPAHLGTRSTGYCSVTHAWNC*WRQRLF
Trigger: GAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATG...AGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTGGATTGTCTTCGGTATaGATGCCTGGAACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSGLSSV*MPGTVA
Trigger: AGCAACAGTTCCAGGCATGCATACCGAAGACAATCC...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp AGTGAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGGGATTGTCTTCGGTATaGATGCCTGGAACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: SEVATKVPGASPAHLGTRGLSSV*MPGTVA
Trigger: AGCAACAGTTCCAGGCATGCATACCGAAGACAATCC...CCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTACGAGTTTAAAGCGATaGTGCCAGGTTCAGACTGGT +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSTSLKR*CQVQTG
Trigger: ACCAGTCTGAACCTGGCAGCATCGCTTTAAACTCGT...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp GTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTACGAGTTTAAAGCGATaGTGCCAGGTTCAGACTGGT +
Preference number: 4 (lower is better)
Translates to: VATKVPGASPAHLGTRSTTSLKR*CQVQTG
Trigger: ACCAGTCTGAACCTGGCAGCATCGCTTTAAACTCGT...AGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTTTCGGTATGCATGCCTaGAACTGTTGCTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSFGMHA*NCCWRQ
Trigger: TTGTCTCCAGCAACAGTTCCAGGCATGCATACCGAA...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTACTCTCTCTCTCTATTaGAGTCAGATGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: GASPAHLGTRSTGYCSVTTLSLY*SQMAAR
Trigger: CCGGGCAGCCATCTGACTCCAATAGAGAGAGAGAGT...AGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTAGGAACCAGGAGTACTaGATACTGTTCCGTTACTGG +
Preference number: 4 (lower is better)
Translates to: VATKVPGASPAHLGTRSTRNQEY*ILFRYW
Trigger: CCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCT...AGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTAGGAACCAGGAGTACTaGATACTGTTCCGTTACTGG +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSRNQEY*ILFRYW
Trigger: CCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCT...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTAGGCTACAAAGGTCCCTaGGGCATCACCTGCTCACCT +
Preference number: 4 (lower is better)
Translates to: PAHLGTRSTGYCSVTGNLGYKGP*GITCSP
Trigger: AGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCC...TAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
3UTR CAA 72 bp TTCCTGGATTGTCTTCGGTATGCATGCCTGGAACTGTaGCTGGAGACAACGGCTCTTCACAGACCACCTCCT +
Preference number: 4 (lower is better)
Translates to: FLDCLRYACLEL*LETTALHRPPP
Trigger: AGGAGGTGGTCTGTGAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATGCATACCGAAGACAATCCAGGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR TCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTATCGCTAACTGGCACTaGATCTCGTCACAATCATCT +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSIANWH*ISSQSS
Trigger: AGATGATTGTGACGAGATTCAGTGCCAGTTAGCGAT...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTAGTTTAAAGCGATGCTaGCAGGTTCAGACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSSLKRC*QVQTGY
Trigger: GTAACCAGTCTGAACCTGGCAGCATCGCTTTAAACT...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CTCTCTCTCTATTGGAGTCAGATGGCTGCCCGGGACCACGTCAGGAATATTTTCGCCTGGAACTGTTGCTaGAGACAACGGCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: LSLYWSQMAARDHVRNIFAWNCC*RQRLFT
Trigger: TGTGAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGC...GAAAATATTCCTGACGTGGTCCCGGGCAGCCATCTGACTCCAATAGAGAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTATCCGTTCTGAGAAATaGAGAAATGTCCCCTTAGGC +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSIRSEK*RNVPLG
Trigger: GCCTAAGGGGACATTTCTCCATTTCTCAGAACGGAT...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644894.1
ENST00000646898.1
CDS-3UTR TCA 90 bp AGTGAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGGACCCAAAGAGAATTTaGTGGATCACCAACATGATC +
Preference number: 4 (lower is better)
Translates to: SEVATKVPGASPAHLGTRDPKRI*WITNMI
Trigger: GATCATGTTGGTGATCCATCAAATTCTCTTTGGGTC...CCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTGCTGAAACACAGTACTaGGAATTCAGTGAGGATACT +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSAETQY*EFSEDT
Trigger: AGTATCCTCACTGAATTCTCAGTACTGTGTTTCAGC...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp AGTGAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGGTAGGCACTAAAGATTaGACAATGGAGCCACACATT +
Preference number: 4 (lower is better)
Translates to: SEVATKVPGASPAHLGTRVGTKD*TMEPHI
Trigger: AATGTGTGGCTCCATTGTTCAATCTTTAGTGCCTAC...CCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642390.1
ENST00000643119.1
ENST00000645045.1
CDS-3UTR GCA 90 bp GGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGGATTGTCTTCGGTATaGATGCCTGGAACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: GASPAHLGTRSTGYCSVTGLSSV*MPGTVA
Trigger: AGCAACAGTTCCAGGCATGCATACCGAAGACAATCC...AGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp GAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGCCCTGGGGCATCACCTaGTCACCTAGGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: EPGVLDTVPLLVTYLDVKPWGIT*SPRNQE
Trigger: CTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGG...CTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp AGTGAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGACCTGTGGCATGATCTaGTACTCCCAATATACGATA +
Preference number: 4 (lower is better)
Translates to: SEVATKVPGASPAHLGTRTCGMI*YSQYTI
Trigger: TATCGTATATTGGGAGTACCAGATCATGCCACAGGT...CCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTACCTGTGGCATGATCTaGTACTCCCAATATACGATA +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSTCGMI*YSQYTI
Trigger: TATCGTATATTGGGAGTACCAGATCATGCCACAGGT...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTCATAACCAAAGGAGGTaGGGGCTTTTATTACGGTTA +
Preference number: 4 (lower is better)
Translates to: VATKVPGASPAHLGTRSTHNQRR*GLLLRL
Trigger: TAACCGTAATAAAAGCCCCCACCTCCTTTGGTTATG...AGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTAGGAACCAGGAGTACTaGATACTGTTCCGTTACTGG +
Preference number: 4 (lower is better)
Translates to: GASPAHLGTRSTGYCSVTRNQEY*ILFRYW
Trigger: CCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCT...AGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTACAGGGACCTGTGGCATaGTCTGGTACTCCCAATATA +
Preference number: 4 (lower is better)
Translates to: PAHLGTRSTGYCSVTGNLQGPVA*SGTPNI
Trigger: TATATTGGGAGTACCAGATCATGCCACAGGTCCCTG...TAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp TGGCTGCCCGGGACCACGTCAGGAATATTTTCTTCAGTAGTCACCACTTCTGTTCAGGGACCTGTGGCATaGTCTGGTACTCCCAATATA +
Preference number: 4 (lower is better)
Translates to: WLPGTTSGIFSSVVTTSVQGPVA*SGTPNI
Trigger: TATATTGGGAGTACCAGATCATGCCACAGGTCCCTG...AACAGAAGTGGTGACTACTGAAGAAAATATTCCTGACGTGGTCCCGGGCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR TCA 90 bp GTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTCATCTTCCTTCTGCGTaGGTATTTTATACTGGATCT +
Preference number: 4 (lower is better)
Translates to: VATKVPGASPAHLGTRSTHLPSA*VFYTGS
Trigger: AGATCCAGTATAAAATACTCACGCAGAAGGAAGATG...AGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTCATCTTCCTTCTGCGTaGGTATTTTATACTGGATCT +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSHLPSA*VFYTGS
Trigger: AGATCCAGTATAAAATACTCACGCAGAAGGAAGATG...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp GGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTATCGCTAACTGGCACTaGATCTCGTCACAATCATCT +
Preference number: 4 (lower is better)
Translates to: GASPAHLGTRSTGYCSVTIANWH*ISSQSS
Trigger: AGATGATTGTGACGAGATTCAGTGCCAGTTAGCGAT...AGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp GTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGAACAATTTCTGGAGTaGTACGAGTTTAAAGCGATG +
Preference number: 4 (lower is better)
Translates to: VATKVPGASPAHLGTRSTEQFLE*YEFKAM
Trigger: CATCGCTTTAAACTCGTATCACTCCAGAAATTGTTC...AGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTCACGCTGTCCCACATTaGCCAGCAACGTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVHAVPH*PATSFC
Trigger: GCAGAAGGACGTTGCTGGTCAATGTGGGACAGCGTG...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644894.1
ENST00000646898.1
CDS-3UTR GCA 90 bp GAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGCCCTGCTCACACCCTaGATGACAAGGGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: EPGVLDTVPLLVTYLDVKALLTP*MTRGRR
Trigger: TCTCCTACCCCTTGTCATGCAGGGTGTGAGCAGGGC...CTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367739.9
ENST00000645045.1
CDS-3UTR GCA 90 bp TGCATAGGCAGATTCTTTTTGTCCAACCCTGGCTTTAACTCTGACCCAAAGAGAGCCCTGCTCACACCCTaGATGACAAGGGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: CIGRFFLSNPGFNSDPKRALLTP*MTRGRR
Trigger: TCTCCTACCCCTTGTCATGCAGGGTGTGAGCAGGGC...TCTCTTTGGGTCAGAGTTAAAGCCAGGGTTGGACAAAAAGAATCTGCCTATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645045.1
CDS-3UTR GCA 90 bp TATTGGAGTCAGATGGCTGCCCGGGACCACGTCAGGAATATTTTCTTCAGTAGTCATGCCTGGAACTGTTaGTGGAGACAACGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: YWSQMAARDHVRNIFFSSHAWNC*WRQRLF
Trigger: GAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATG...ACTACTGAAGAAAATATTCCTGACGTGGTCCCGGGCAGCCATCTGACTCCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR GCA 90 bp CCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATGTCTTCGGTATGCATaGCTGGAACTGTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PAHLGTRSTGYCSVTGNLCLRYA*LELLLE
Trigger: CTCCAGCAACAGTTCCAGGCATGCATACCGAAGACA...TAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTTTGGAGTCAGATGGCTaGCCGGGACCACGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVLESDG*PGPRQE
Trigger: TTCCTGACGTGGTCCCGGGCAGCCATCTGACTCCAA...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTAGACTTCAAAGTTGGTaGAACTTAGCTGATCTCATG +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSRLQSW*NLADLM
Trigger: CATGAGATCAGCTAAGTTGCACCAACTTTGAAGTCT...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp ATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGCCCTGGGGCATCACCTaGTCACCTAGGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: MPHILFTLSCTLSHSIWLPWGIT*SPRNQE
Trigger: CTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGG...CAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTTCTAAGGAAAATGGCTaGTATGACGTGATGAGTGAT +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSSKENG*YDVMSD
Trigger: ATCACTCATCACGTCATACCAGCCATTTTCCTTAGA...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTTCTAAGGAAAATGGCTaGTATGACGTGATGAGTGAT +
Preference number: 4 (lower is better)
Translates to: VATKVPGASPAHLGTRSTSKENG*YDVMSD
Trigger: ATCACTCATCACGTCATACCAGCCATTTTCCTTAGA...AGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp AGTGAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGTCTAAGGAAAATGGCTaGTATGACGTGATGAGTGAT +
Preference number: 4 (lower is better)
Translates to: SEVATKVPGASPAHLGTRSKENG*YDVMSD
Trigger: ATCACTCATCACGTCATACCAGCCATTTTCCTTAGA...CCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CTCTCTCTCTATTGGAGTCAGATGGCTGCCCGGGACCACGTCAGGAATATTTTCTTCGGTATGCATGCCTaGAACTGTTGCTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: LSLYWSQMAARDHVRNIFFGMHA*NCCWRQ
Trigger: TTGTCTCCAGCAACAGTTCCAGGCATGCATACCGAA...GAAAATATTCCTGACGTGGTCCCGGGCAGCCATCTGACTCCAATAGAGAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR TCA 90 bp GTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTAAACCATTTCTGGAGTaGTCACTCTCAGAACAATTT +
Preference number: 4 (lower is better)
Translates to: VATKVPGASPAHLGTRSTKPFLE*SLSEQF
Trigger: AAATTGTTCTGAGAGTGATCACTCCAGAAATGGTTT...AGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp AGTGAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAAACCATTTCTGGAGTaGTCACTCTCAGAACAATTT +
Preference number: 4 (lower is better)
Translates to: SEVATKVPGASPAHLGTRKPFLE*SLSEQF
Trigger: AAATTGTTCTGAGAGTGATCACTCCAGAAATGGTTT...CCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTCTTTTATTACGGTTATaGGCTCTTGTCCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSLLLRL*ALVLLF
Trigger: AAACAGAAGGACAAGAGCTCATAACCGTAATAAAAG...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp GTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGTCACTCCATTTGGTTaGTACCAACTAAGATACAAT +
Preference number: 4 (lower is better)
Translates to: VATKVPGASPAHLGTRSTVTPFG*YQLRYN
Trigger: ATTGTATCTTAGTTGGTATCAACCAAATGGAGTGAC...AGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp AATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTAGAGGAGAGCCATGCTaGTACCGACGGTCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: NATHPLYAFMYTKSLHLVRGEPC*YRRSLA
Trigger: AGCCAGCGACCGTCGGTAGCAGCATGGCTCTCCTCT...AACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367739.9
CDS-3UTR GCA 90 bp CCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTAGGATTGTCTTCGGTATaGATGCCTGGAACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: PAHLGTRSTGYCSVTGNLGLSSV*MPGTVA
Trigger: AGCAACAGTTCCAGGCATGCATACCGAAGACAATCC...TAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp TTTCGGGATCATAATCGACTTCCTGCTCGTCTCCATTTACAAAAACTGAAGGGTTTGGAGTCAGATGGCTaGCCGGGACCACGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: FRDHNRLPARLHLQKLKGLESDG*PGPRQE
Trigger: TTCCTGACGTGGTCCCGGGCAGCCATCTGACTCCAA...ACCCTTCAGTTTTTGTAAATGGAGACGAGCAGGAAGTCGATTATGATCCCGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR GCA 90 bp CCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTAACGAGTTTAAAGCGATaGTGCCAGGTTCAGACTGGT +
Preference number: 4 (lower is better)
Translates to: PAHLGTRSTGYCSVTGNLTSLKR*CQVQTG
Trigger: ACCAGTCTGAACCTGGCAGCATCGCTTTAAACTCGT...TAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGCCCTGGGGCATCACCTaGTCACCTAGGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: QAKSENATHPLYAFMYTKPWGIT*SPRNQE
Trigger: CTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGG...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp AGCAGAAAACTGTCCAGGAAAATCAGACTTCAAAGTTGGTGCAACTTAGCTGATCCCTGGGGCATCACCTaGTCACCTAGGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: SRKLSRKIRLQSWCNLADPWGIT*SPRNQE
Trigger: CTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGG...ATCAGCTAAGTTGCACCAACTTTGAAGTCTGATTTTCCTGGACAGTTTTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATTCGGTATGCATGCCTaGAACTGTTGCTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: PAHLGTRSTGYCSVTGNLFGMHA*NCCWRQ
Trigger: TTGTCTCCAGCAACAGTTCCAGGCATGCATACCGAA...TAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTTCTATTGGAGTCAGATaGCTGCCCGGGACCACGTCA +
Preference number: 4 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVSIGVR*LPGTTS
Trigger: TGACGTGGTCCCGGGCAGCCATCTGACTCCAATAGA...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGTCTATTGGAGTCAGATaGCTGCCCGGGACCACGTCA +
Preference number: 4 (lower is better)
Translates to: EPGVLDTVPLLVTYLDVKSIGVR*LPGTTS
Trigger: TGACGTGGTCCCGGGCAGCCATCTGACTCCAATAGA...CTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp AGTGAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGTATCAAAACCATTTCTaGAGTGATCACTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: SEVATKVPGASPAHLGTRYQNHF*SDHSQN
Trigger: GTTCTGAGAGTGATCACTCCAGAAATGGTTTTGATA...CCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTAAGGAACCAGGAGTACTaGATACTGTTCCGTTACTGG +
Preference number: 4 (lower is better)
Translates to: PAHLGTRSTGYCSVTGNLRNQEY*ILFRYW
Trigger: CCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCT...TAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp ATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGCGGCGTGATTTGTTGTaGCGGCAACCAGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: MPHILFTLSCTLSHSIWLRRDLL*RQPGKR
Trigger: CCTCTTCCCTGGTTGCCGCCACAACAAATCACGCCG...CAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642390.1
ENST00000644894.1
ENST00000646036.1
ENST00000646898.1
CDS-3UTR CCA 90 bp AGTGAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAATTGTAACATTAGTTaGTGTAGGCAAAGAGTCGGA +
Preference number: 4 (lower is better)
Translates to: SEVATKVPGASPAHLGTRNCNIS*CRQRVG
Trigger: TCCGACTCTTTGCCTACACCAACTAATGTTACAATT...CCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647124.1
CDS-3UTR TCA 90 bp GGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTCATCTTCCTTCTGCGTaGGTATTTTATACTGGATCT +
Preference number: 4 (lower is better)
Translates to: GASPAHLGTRSTGYCSVTHLPSA*VFYTGS
Trigger: AGATCCAGTATAAAATACTCACGCAGAAGGAAGATG...AGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCACACGCTGTCCCACATTaGCCAGCAACGTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: HILFTLSCTLSHSIWLIPHAVPH*PATSFC
Trigger: GCAGAAGGACGTTGCTGGTCAATGTGGGACAGCGTG...TGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644894.1
ENST00000646898.1
CDS-3UTR GCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTATGTCAATCATGATTTaGTTCTCCTCCTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSMSIMI*FSSFLI
Trigger: TATCAGAAAGGAGGAGAAGCAAATCATGATTGACAT...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp AGTGAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGATGTCAATCATGATTTaGTTCTCCTCCTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: SEVATKVPGASPAHLGTRMSIMI*FSSFLI
Trigger: TATCAGAAAGGAGGAGAAGCAAATCATGATTGACAT...CCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp CACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCATTGGAGTCAGATGGCTaGCCGGGACCACGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: HILFTLSCTLSHSIWLIPLESDG*PGPRQE
Trigger: TTCCTGACGTGGTCCCGGGCAGCCATCTGACTCCAA...TGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTTGGAGTCAGATGGCTaGCCGGGACCACGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: QAKSENATHPLYAFMYTKLESDG*PGPRQE
Trigger: TTCCTGACGTGGTCCCGGGCAGCCATCTGACTCCAA...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp TATTGGAGTCAGATGGCTGCCCGGGACCACGTCAGGAATATTTTCTTCAGTAGTACGAGTTTAAAGCGATaGTGCCAGGTTCAGACTGGT +
Preference number: 4 (lower is better)
Translates to: YWSQMAARDHVRNIFFSSTSLKR*CQVQTG
Trigger: ACCAGTCTGAACCTGGCAGCATCGCTTTAAACTCGT...ACTACTGAAGAAAATATTCCTGACGTGGTCCCGGGCAGCCATCTGACTCCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR GCA 90 bp CATGCCTGGAACTGTTGCTGGAGACAACGGCTCTTCACAGACCACCTCCTTTTCAGACTTCAAAGTTGGTaGAACTTAGCTGATCTCATG +
Preference number: 4 (lower is better)
Translates to: HAWNCCWRQRLFTDHLLFRLQSW*NLADLM
Trigger: CATGAGATCAGCTAAGTTGCACCAACTTTGAAGTCT...GAAAAGGAGGTGGTCTGTGAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR GCA 90 bp GAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTTCATCAACACTCTaGTCTCTGGGGTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: EPGVLDTVPLLVTYLDVKVSSTL*SLGCAG
Trigger: CCCTGCACACCCCAGAGAGCAGAGTGTTGATGAAAC...CTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642390.1
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp GGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTTCTAAGGAAAATGGCTaGTATGACGTGATGAGTGAT +
Preference number: 4 (lower is better)
Translates to: GASPAHLGTRSTGYCSVTSKENG*YDVMSD
Trigger: ATCACTCATCACGTCATACCAGCCATTTTCCTTAGA...AGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp ACAGGTAGTTTCGGGATCATAATCGACTTCCTGCTCGTCTCCATTTACAAAAACTCTATTGGAGTCAGATaGCTGCCCGGGACCACGTCA +
Preference number: 4 (lower is better)
Translates to: TGSFGIIIDFLLVSIYKNSIGVR*LPGTTS
Trigger: TGACGTGGTCCCGGGCAGCCATCTGACTCCAATAGA...GTTTTTGTAAATGGAGACGAGCAGGAAGTCGATTATGATCCCGAAACTACCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTTCTCAGAACAATTTCTaGAGTGATACGAGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: EVATKVPGASPAHLGTRSSQNNF*SDTSLK
Trigger: CTTTAAACTCGTATCACTCCAGAAATTGTTCTGAGA...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp AGTGAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGTTTGGAATCTTCTGTTaGTCTATAACCAATCAAGGA +
Preference number: 4 (lower is better)
Translates to: SEVATKVPGASPAHLGTRFGIFC*SITNQG
Trigger: TCCTTGATTGGTTATAGACCAACAGAAGATTCCAAA...CCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp AGTGAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGCTAAGTCACTCCATTTaGTTGATACCAACTAAGATA +
Preference number: 4 (lower is better)
Translates to: SEVATKVPGASPAHLGTRLSHSI*LIPTKI
Trigger: TATCTTAGTTGGTATCAACCAAATGGAGTGACTTAG...CCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAGGCTACAAAGGTCCCTaGGGCATCACCTGCTCACCT +
Preference number: 4 (lower is better)
Translates to: HILFTLSCTLSHSIWLIPGYKGP*GITCSP
Trigger: AGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCC...TGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGGGCTACAAAGGTCCCTaGGGCATCACCTGCTCACCT +
Preference number: 4 (lower is better)
Translates to: QAKSENATHPLYAFMYTKGYKGP*GITCSP
Trigger: AGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCC...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATAGGCTACAAAGGTCCCTaGGGCATCACCTGCTCACCT +
Preference number: 4 (lower is better)
Translates to: PHILFTLSCTLSHSIWLIGYKGP*GITCSP
Trigger: AGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCC...TATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCACGGCGTGATTTGTTGTaGCGGCAACCAGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: HILFTLSCTLSHSIWLIPRRDLL*RQPGKR
Trigger: CCTCTTCCCTGGTTGCCGCCACAACAAATCACGCCG...TGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642390.1
ENST00000644894.1
ENST00000646036.1
ENST00000646898.1
CDS-3UTR CCA 90 bp CCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTAAATTGTAACATTAGTTaGTGTAGGCACTCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: PAHLGTRSTGYCSVTGNLNCNIS*CRHSRP
Trigger: GGGACGCGAGTGCCTACACCAACTAATGTTACAATT...TAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645753.1
CDS-3UTR TCA 90 bp CCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTAGACCCAAAGAGAATTTaGTGGATCACCAACATGATC +
Preference number: 4 (lower is better)
Translates to: PAHLGTRSTGYCSVTGNLDPKRI*WITNMI
Trigger: GATCATGTTGGTGATCCATCAAATTCTCTTTGGGTC...TAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTAGCTGAAACACAGTACTaGGAATTCAGTGAGGATACT +
Preference number: 4 (lower is better)
Translates to: PAHLGTRSTGYCSVTGNLAETQY*EFSEDT
Trigger: AGTATCCTCACTGAATTCTCAGTACTGTGTTTCAGC...TAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp GGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGTCACTCCATTTGGTTaGTACCAACTAAGATACAAT +
Preference number: 4 (lower is better)
Translates to: GASPAHLGTRSTGYCSVTVTPFG*YQLRYN
Trigger: ATTGTATCTTAGTTGGTATCAACCAAATGGAGTGAC...AGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp AGCAGAAAACTGTCCAGGAAAATCAGACTTCAAAGTTGGTGCAACTTAGCTGATAGCCTGTCACTGCACTaGACACTGCAGGCAACCGTA +
Preference number: 4 (lower is better)
Translates to: SRKLSRKIRLQSWCNLADSLSLH*TLQATV
Trigger: TACGGTTGCCTGCAGTGTTCAGTGCAGTGACAGGCT...ATCAGCTAAGTTGCACCAACTTTGAAGTCTGATTTTCCTGGACAGTTTTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644894.1
ENST00000646898.1
CDS-3UTR TCA 90 bp CCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATAAGCCTGTCACTGCACTaGACACTGCAGGCAACCGTA +
Preference number: 4 (lower is better)
Translates to: PHILFTLSCTLSHSIWLISLSLH*TLQATV
Trigger: TACGGTTGCCTGCAGTGTTCAGTGCAGTGACAGGCT...TATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644894.1
ENST00000646898.1
CDS-3UTR GCA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTTGTCTTCGGTATGCATaGCTGGAACTGTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVCLRYA*LELLLE
Trigger: CTCCAGCAACAGTTCCAGGCATGCATACCGAAGACA...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp ATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGGCCTGGAACTGTTGCTaGAGACAACGGCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: MPHILFTLSCTLSHSIWLAWNCC*RQRLFT
Trigger: TGTGAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGC...CAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCATCTATTGGAGTCAGATaGCTGCCCGGGACCACGTCA +
Preference number: 4 (lower is better)
Translates to: HILFTLSCTLSHSIWLIPSIGVR*LPGTTS
Trigger: TGACGTGGTCCCGGGCAGCCATCTGACTCCAATAGA...TGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCTATTGGAGTCAGATaGCTGCCCGGGACCACGTCA +
Preference number: 4 (lower is better)
Translates to: QAKSENATHPLYAFMYTKSIGVR*LPGTTS
Trigger: TGACGTGGTCCCGGGCAGCCATCTGACTCCAATAGA...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GTTCATTCTCACATACACATTGTACACCCTAATGTAACAGGTAGTTTCGGGATCTCTATTGGAGTCAGATaGCTGCCCGGGACCACGTCA +
Preference number: 4 (lower is better)
Translates to: VHSHIHIVHPNVTGSFGISIGVR*LPGTTS
Trigger: TGACGTGGTCCCGGGCAGCCATCTGACTCCAATAGA...GATCCCGAAACTACCTGTTACATTAGGGTGTACAATGTGTATGTGAGAATGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp AGCAGAAAACTGTCCAGGAAAATCAGACTTCAAAGTTGGTGCAACTTAGCTGATTCTATTGGAGTCAGATaGCTGCCCGGGACCACGTCA +
Preference number: 4 (lower is better)
Translates to: SRKLSRKIRLQSWCNLADSIGVR*LPGTTS
Trigger: TGACGTGGTCCCGGGCAGCCATCTGACTCCAATAGA...ATCAGCTAAGTTGCACCAACTTTGAAGTCTGATTTTCCTGGACAGTTTTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp ATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGACTCTCTCTCTCTATTaGAGTCAGATGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: MPHILFTLSCTLSHSIWLTLSLY*SQMAAR
Trigger: CCGGGCAGCCATCTGACTCCAATAGAGAGAGAGAGT...CAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTTATCAAAACCATTTCTaGAGTGATCACTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: GASPAHLGTRSTGYCSVTYQNHF*SDHSQN
Trigger: GTTCTGAGAGTGATCACTCCAGAAATGGTTTTGATA...AGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGCAACACTCTGCTCTCTaGGGTGTGCAGGGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: EPGVLDTVPLLVTYLDVKQHSAL*GVQGFL
Trigger: TAAAAAGCCCTGCACACCCCAGAGAGCAGAGTGTTG...CTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642390.1
ENST00000643119.1
ENST00000645045.1
CDS-3UTR TCA 90 bp CCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTACATCTTCCTTCTGCGTaGGTATTTTATACTGGATCT +
Preference number: 4 (lower is better)
Translates to: PAHLGTRSTGYCSVTGNLHLPSA*VFYTGS
Trigger: AGATCCAGTATAAAATACTCACGCAGAAGGAAGATG...TAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTAGAACAATTTCTGGAGTaGTACGAGTTTAAAGCGATG +
Preference number: 4 (lower is better)
Translates to: PAHLGTRSTGYCSVTGNLEQFLE*YEFKAM
Trigger: CATCGCTTTAAACTCGTATCACTCCAGAAATTGTTC...TAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGGAAAAACAAGCGGCGTaGTTTGTTGTGGCGGCAACC +
Preference number: 4 (lower is better)
Translates to: QAKSENATHPLYAFMYTKEKQAA*FVVAAT
Trigger: GGTTGCCGCCACAACAAATCACGCCGCTTGTTTTTC...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000642390.1
ENST00000644894.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATAGAAAAACAAGCGGCGTaGTTTGTTGTGGCGGCAACC +
Preference number: 4 (lower is better)
Translates to: PHILFTLSCTLSHSIWLIEKQAA*FVVAAT
Trigger: GGTTGCCGCCACAACAAATCACGCCGCTTGTTTTTC...TATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642390.1
ENST00000644894.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp GGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTATGTCAATCATGATTTaGTTCTCCTCCTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: GASPAHLGTRSTGYCSVTMSIMI*FSSFLI
Trigger: TATCAGAAAGGAGGAGAAGCAAATCATGATTGACAT...AGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp AGCAGAAAACTGTCCAGGAAAATCAGACTTCAAAGTTGGTGCAACTTAGCTGATCATGCCTGGAACTGTTaGTGGAGACAACGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SRKLSRKIRLQSWCNLADHAWNC*WRQRLF
Trigger: GAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATG...ATCAGCTAAGTTGCACCAACTTTGAAGTCTGATTTTCCTGGACAGTTTTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp CCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACATGCCTGGAACTGTTaGTGGAGACAACGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PHILFTLSCTLSHSIWLIHAWNC*WRQRLF
Trigger: GAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATG...TATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp AATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTCATGCCTGGAACTGTTaGTGGAGACAACGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: NATHPLYAFMYTKSLHLVHAWNC*WRQRLF
Trigger: GAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATG...AACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp ATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGTGTCTTCGGTATGCATaGCTGGAACTGTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: MPHILFTLSCTLSHSIWLCLRYA*LELLLE
Trigger: CTCCAGCAACAGTTCCAGGCATGCATACCGAAGACA...CAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp TGCATAGGCAGATTCTTTTTGTCCAACCCTGGCTTTAACTCTGACCCAAAGAGAGGATTGTCTTCGGTATaGATGCCTGGAACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: CIGRFFLSNPGFNSDPKRGLSSV*MPGTVA
Trigger: AGCAACAGTTCCAGGCATGCATACCGAAGACAATCC...TCTCTTTGGGTCAGAGTTAAAGCCAGGGTTGGACAAAAAGAATCTGCCTATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR GCA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTGGATTGTCTTCGGTATaGATGCCTGGAACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVGLSSV*MPGTVA
Trigger: AGCAACAGTTCCAGGCATGCATACCGAAGACAATCC...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp ACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGATACAATTGGAGTCAGATGGCTaGCCGGGACCACGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: TLSCTLSHSIWLIPTKIQLESDG*PGPRQE
Trigger: TTCCTGACGTGGTCCCGGGCAGCCATCTGACTCCAA...TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp AGCAGAAAACTGTCCAGGAAAATCAGACTTCAAAGTTGGTGCAACTTAGCTGATGTTTCATCAACACTCTaGTCTCTGGGGTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SRKLSRKIRLQSWCNLADVSSTL*SLGCAG
Trigger: CCCTGCACACCCCAGAGAGCAGAGTGTTGATGAAAC...ATCAGCTAAGTTGCACCAACTTTGAAGTCTGATTTTCCTGGACAGTTTTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642390.1
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp CACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAGCCTGGAACTGTTGCTaGAGACAACGGCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: HILFTLSCTLSHSIWLIPAWNCC*RQRLFT
Trigger: TGTGAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGC...TGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp AATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGCCTGGAACTGTTGCTaGAGACAACGGCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: NATHPLYAFMYTKSLHLVAWNCC*RQRLFT
Trigger: TGTGAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGC...AACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp AGCAGAAAACTGTCCAGGAAAATCAGACTTCAAAGTTGGTGCAACTTAGCTGATGCCTGGAACTGTTGCTaGAGACAACGGCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: SRKLSRKIRLQSWCNLADAWNCC*RQRLFT
Trigger: TGTGAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGC...ATCAGCTAAGTTGCACCAACTTTGAAGTCTGATTTTCCTGGACAGTTTTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGTTCGGTATGCATGCCTaGAACTGTTGCTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: EPGVLDTVPLLVTYLDVKFGMHA*NCCWRQ
Trigger: TTGTCTCCAGCAACAGTTCCAGGCATGCATACCGAA...CTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGTCTATTGGAGTCAGATaGCTGCCCGGGACCACGTCA +
Preference number: 4 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKSIGVR*LPGTTS
Trigger: TGACGTGGTCCCGGGCAGCCATCTGACTCCAATAGA...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTCTCTCTCTCTATTaGAGTCAGATGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: HILFTLSCTLSHSIWLIPTLSLY*SQMAAR
Trigger: CCGGGCAGCCATCTGACTCCAATAGAGAGAGAGAGT...TGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp ACTCTTTACCGCTATCATCCACAAGTAGATCCACTAGCACATGTGGTTTATCATACTCTCTCTCTCTATTaGAGTCAGATGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: TLYRYHPQVDPLAHVVYHTLSLY*SQMAAR
Trigger: CCGGGCAGCCATCTGACTCCAATAGAGAGAGAGAGT...ATGATAAACCACATGTGCTAGTGGATCTACTTGTGGATGATAGCGGTAAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGACTCTCTCTCTCTATTaGAGTCAGATGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: QAKSENATHPLYAFMYTKTLSLY*SQMAAR
Trigger: CCGGGCAGCCATCTGACTCCAATAGAGAGAGAGAGT...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp AATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTACTCTCTCTCTCTATTaGAGTCAGATGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: NATHPLYAFMYTKSLHLVTLSLY*SQMAAR
Trigger: CCGGGCAGCCATCTGACTCCAATAGAGAGAGAGAGT...AACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTTCTCAGAACAATTTCTaGAGTGATACGAGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: GASPAHLGTRSTGYCSVTSQNNF*SDTSLK
Trigger: CTTTAAACTCGTATCACTCCAGAAATTGTTCTGAGA...AGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTTTTGGAATCTTCTGTTaGTCTATAACCAATCAAGGA +
Preference number: 4 (lower is better)
Translates to: GASPAHLGTRSTGYCSVTFGIFC*SITNQG
Trigger: TCCTTGATTGGTTATAGACCAACAGAAGATTCCAAA...AGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CTCTCTCTCTATTGGAGTCAGATGGCTGCCCGGGACCACGTCAGGAATATTTTCCTAAAGATTGAACAATaGAGCCACACATTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: LSLYWSQMAARDHVRNIFLKIEQ*SHTFQF
Trigger: AAACTGGAATGTGTGGCTCCATTGTTCAATCTTTAG...GAAAATATTCCTGACGTGGTCCCGGGCAGCCATCTGACTCCAATAGAGAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR TCA 90 bp CCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTAGTCACTCCATTTGGTTaGTACCAACTAAGATACAAT +
Preference number: 4 (lower is better)
Translates to: PAHLGTRSTGYCSVTGNLVTPFG*YQLRYN
Trigger: ATTGTATCTTAGTTGGTATCAACCAAATGGAGTGAC...TAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGGAAAAACAAGCGGCGTaGTTTGTTGTGGCGGCAACC +
Preference number: 4 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKEKQAA*FVVAAT
Trigger: GGTTGCCGCCACAACAAATCACGCCGCTTGTTTTTC...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642390.1
ENST00000644894.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGCATGCCTGGAACTGTTaGTGGAGACAACGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKHAWNC*WRQRLF
Trigger: GAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATG...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp AGCAGAAAACTGTCCAGGAAAATCAGACTTCAAAGTTGGTGCAACTTAGCTGATTGTCTTCGGTATGCATaGCTGGAACTGTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SRKLSRKIRLQSWCNLADCLRYA*LELLLE
Trigger: CTCCAGCAACAGTTCCAGGCATGCATACCGAAGACA...ATCAGCTAAGTTGCACCAACTTTGAAGTCTGATTTTCCTGGACAGTTTTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp AATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTTGTCTTCGGTATGCATaGCTGGAACTGTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: NATHPLYAFMYTKSLHLVCLRYA*LELLLE
Trigger: CTCCAGCAACAGTTCCAGGCATGCATACCGAAGACA...AACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTAGTTTAAAGCGATGCTaGCAGGTTCAGACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVSLKRC*QVQTGY
Trigger: GTAACCAGTCTGAACCTGGCAGCATCGCTTTAAACT...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp GAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGAGTTTAAAGCGATGCTaGCAGGTTCAGACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: EPGVLDTVPLLVTYLDVKSLKRC*QVQTGY
Trigger: GTAACCAGTCTGAACCTGGCAGCATCGCTTTAAACT...CTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp ATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGACGAGTTTAAAGCGATaGTGCCAGGTTCAGACTGGT +
Preference number: 4 (lower is better)
Translates to: MPHILFTLSCTLSHSIWLTSLKR*CQVQTG
Trigger: ACCAGTCTGAACCTGGCAGCATCGCTTTAAACTCGT...CAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp CTAGCACATGTGGTTTATCATAACCAAAGGAGGTGGGGGCTTTTATTACGGTTAACGAGTTTAAAGCGATaGTGCCAGGTTCAGACTGGT +
Preference number: 4 (lower is better)
Translates to: LAHVVYHNQRRWGLLLRLTSLKR*CQVQTG
Trigger: ACCAGTCTGAACCTGGCAGCATCGCTTTAAACTCGT...TAACCGTAATAAAAGCCCCCACCTCCTTTGGTTATGATAAACCACATGTGCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGGCCTGGAACTGTTGCTaGAGACAACGGCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKAWNCC*RQRLFT
Trigger: TGTGAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGC...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp ATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGTTCGGTATGCATGCCTaGAACTGTTGCTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: MPHILFTLSCTLSHSIWLFGMHA*NCCWRQ
Trigger: TTGTCTCCAGCAACAGTTCCAGGCATGCATACCGAA...CAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp AGTCACCACTTCTGTTATACTAGAAAGTTCTTCTGTATGTTCCACTTTTCCTGGACTCTCTCTCTCTATTaGAGTCAGATGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: SHHFCYTRKFFCMFHFSWTLSLY*SQMAAR
Trigger: CCGGGCAGCCATCTGACTCCAATAGAGAGAGAGAGT...CCAGGAAAAGTGGAACATACAGAAGAACTTTCTAGTATAACAGAAGTGGTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp CCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATATCAAAACCATTTCTaGAGTGATCACTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: PAHLGTRSTGYCSVTGNLYQNHF*SDHSQN
Trigger: GTTCTGAGAGTGATCACTCCAGAAATGGTTTTGATA...TAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp ATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGAGGAACCAGGAGTACTaGATACTGTTCCGTTACTGG +
Preference number: 4 (lower is better)
Translates to: MPHILFTLSCTLSHSIWLRNQEY*ILFRYW
Trigger: CCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCT...CAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GATCCACTAGCACATGTGGTTTATCATAACCAAAGGAGGTGGGGGCTTTTATTAAGGAACCAGGAGTACTaGATACTGTTCCGTTACTGG +
Preference number: 4 (lower is better)
Translates to: DPLAHVVYHNQRRWGLLLRNQEY*ILFRYW
Trigger: CCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCT...TAATAAAAGCCCCCACCTCCTTTGGTTATGATAAACCACATGTGCTAGTGGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp AATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTCAACACTCTGCTCTCTaGGGTGTGCAGGGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: NATHPLYAFMYTKSLHLVQHSAL*GVQGFL
Trigger: TAAAAAGCCCTGCACACCCCAGAGAGCAGAGTGTTG...AACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642390.1
ENST00000643119.1
ENST00000645045.1
3UTR CAA 72 bp CTAGAAAGTTCTTCTGTATGTTCCACTTTTCCTGGATaGTCTTCGGTATGCATGCCTGGAACTGTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LESSSVCSTFPG*SSVCMPGTVAG
Trigger: TCCAGCAACAGTTCCAGGCATGCATACCGAAGACAATCCAGGAAAAGTGGAACATACAGAAGAACTTTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR TCA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGCAGGGACCTGTGGCATaGTCTGGTACTCCCAATATA +
Preference number: 4 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKQGPVA*SGTPNI
Trigger: TATATTGGGAGTACCAGATCATGCCACAGGTCCCTG...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp GAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGACCCAAAGAGAATTTaGTGGATCACCAACATGATC +
Preference number: 4 (lower is better)
Translates to: EPGVLDTVPLLVTYLDVKDPKRI*WITNMI
Trigger: GATCATGTTGGTGATCCATCAAATTCTCTTTGGGTC...CTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp ACATTCCAGTTTCATCAACACTCTGCTCTCTGGGGTGTGCAGGGCTTTTTACAAGAACAATTTCTGGAGTaGTACGAGTTTAAAGCGATG +
Preference number: 4 (lower is better)
Translates to: TFQFHQHSALWGVQGFLQEQFLE*YEFKAM
Trigger: CATCGCTTTAAACTCGTATCACTCCAGAAATTGTTC...TTGTAAAAAGCCCTGCACACCCCAGAGAGCAGAGTGTTGATGAAACTGGAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR GCA 90 bp CACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAGGATTGTCTTCGGTATaGATGCCTGGAACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: HILFTLSCTLSHSIWLIPGLSSV*MPGTVA
Trigger: AGCAACAGTTCCAGGCATGCATACCGAAGACAATCC...TGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp AATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGGATTGTCTTCGGTATaGATGCCTGGAACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: NATHPLYAFMYTKSLHLVGLSSV*MPGTVA
Trigger: AGCAACAGTTCCAGGCATGCATACCGAAGACAATCC...AACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGACGAGTTTAAAGCGATaGTGCCAGGTTCAGACTGGT +
Preference number: 4 (lower is better)
Translates to: QAKSENATHPLYAFMYTKTSLKR*CQVQTG
Trigger: ACCAGTCTGAACCTGGCAGCATCGCTTTAAACTCGT...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp AGTATCAAAACCATTTCTGGAGTGATCACTCTCAGAACAATTTCTGGAGTGATAGTTTCATCAACACTCTaGTCTCTGGGGTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SIKTISGVITLRTISGVIVSSTL*SLGCAG
Trigger: CCCTGCACACCCCAGAGAGCAGAGTGTTGATGAAAC...TATCACTCCAGAAATTGTTCTGAGAGTGATCACTCCAGAAATGGTTTTGATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp TGCATAGGCAGATTCTTTTTGTCCAACCCTGGCTTTAACTCTGACCCAAAGAGAACCTGTGGCATGATCTaGTACTCCCAATATACGATA +
Preference number: 4 (lower is better)
Translates to: CIGRFFLSNPGFNSDPKRTCGMI*YSQYTI
Trigger: TATCGTATATTGGGAGTACCAGATCATGCCACAGGT...TCTCTTTGGGTCAGAGTTAAAGCCAGGGTTGGACAAAAAGAATCTGCCTATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp ACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGATACAAGCCTGGAACTGTTGCTaGAGACAACGGCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: TLSCTLSHSIWLIPTKIQAWNCC*RQRLFT
Trigger: TGTGAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGC...TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTTCGGTATGCATGCCTaGAACTGTTGCTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: QAKSENATHPLYAFMYTKFGMHA*NCCWRQ
Trigger: TTGTCTCCAGCAACAGTTCCAGGCATGCATACCGAA...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTCATAACCAAAGGAGGTaGGGGCTTTTATTACGGTTA +
Preference number: 4 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVHNQRR*GLLLRL
Trigger: TAACCGTAATAAAAGCCCCCACCTCCTTTGGTTATG...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTACTAAGTCACTCCATTTaGTTGATACCAACTAAGATA +
Preference number: 4 (lower is better)
Translates to: PAHLGTRSTGYCSVTGNLLSHSI*LIPTKI
Trigger: TATCTTAGTTGGTATCAACCAAATGGAGTGACTTAG...TAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp AATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTAGGAACCAGGAGTACTaGATACTGTTCCGTTACTGG +
Preference number: 4 (lower is better)
Translates to: NATHPLYAFMYTKSLHLVRNQEY*ILFRYW
Trigger: CCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCT...AACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAATCGCTAACTGGCACTaGATCTCGTCACAATCATCT +
Preference number: 4 (lower is better)
Translates to: HILFTLSCTLSHSIWLIPIANWH*ISSQSS
Trigger: AGATGATTGTGACGAGATTCAGTGCCAGTTAGCGAT...TGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CTAGAAAGTTCTTCTGTATGTTCCACTTTTCCTGGATTGTCTTCGGTATGCATGATCGCTAACTGGCACTaGATCTCGTCACAATCATCT +
Preference number: 4 (lower is better)
Translates to: LESSSVCSTFPGLSSVCMIANWH*ISSQSS
Trigger: AGATGATTGTGACGAGATTCAGTGCCAGTTAGCGAT...CATGCATACCGAAGACAATCCAGGAAAAGTGGAACATACAGAAGAACTTTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR TCA 90 bp ATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGGCTGAAACACAGTACTaGGAATTCAGTGAGGATACT +
Preference number: 4 (lower is better)
Translates to: MPHILFTLSCTLSHSIWLAETQY*EFSEDT
Trigger: AGTATCCTCACTGAATTCTCAGTACTGTGTTTCAGC...CAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CCCACACATGTAAGACTCCTTCTGCTGAAACACAGTACTGAGAATTCAGTGAGGAAACCATTTCTGGAGTaGTCACTCTCAGAACAATTT +
Preference number: 4 (lower is better)
Translates to: PTHVRLLLLKHSTENSVRKPFLE*SLSEQF
Trigger: AAATTGTTCTGAGAGTGATCACTCCAGAAATGGTTT...CCTCACTGAATTCTCAGTACTGTGTTTCAGCAGAAGGAGTCTTACATGTGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR TCA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGGATGGAGATCCGTTCTaGGAAATGGAGAAATGTCCC +
Preference number: 4 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKDGDPF*EMEKCP
Trigger: GGGACATTTCTCCATTTCTCAGAACGGATCTCCATC...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644894.1
ENST00000646898.1
CDS-3UTR TCA 90 bp GATCCACTAGCACATGTGGTTTATCATAACCAAAGGAGGTGGGGGCTTTTATTAGTAGGCACTAAAGATTaGACAATGGAGCCACACATT +
Preference number: 4 (lower is better)
Translates to: DPLAHVVYHNQRRWGLLLVGTKD*TMEPHI
Trigger: AATGTGTGGCTCCATTGTTCAATCTTTAGTGCCTAC...TAATAAAAGCCCCCACCTCCTTTGGTTATGATAAACCACATGTGCTAGTGGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR GCA 90 bp AGTCACCACTTCTGTTATACTAGAAAGTTCTTCTGTATGTTCCACTTTTCCTGGGGATTGTCTTCGGTATaGATGCCTGGAACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: SHHFCYTRKFFCMFHFSWGLSSV*MPGTVA
Trigger: AGCAACAGTTCCAGGCATGCATACCGAAGACAATCC...CCAGGAAAAGTGGAACATACAGAAGAACTTTCTAGTATAACAGAAGTGGTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR GCA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGAGTTTAAAGCGATGCTaGCAGGTTCAGACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: QAKSENATHPLYAFMYTKSLKRC*QVQTGY
Trigger: GTAACCAGTCTGAACCTGGCAGCATCGCTTTAAACT...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp GTTCATTCTCACATACACATTGTACACCCTAATGTAACAGGTAGTTTCGGGATCAGTTTAAAGCGATGCTaGCAGGTTCAGACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: VHSHIHIVHPNVTGSFGISLKRC*QVQTGY
Trigger: GTAACCAGTCTGAACCTGGCAGCATCGCTTTAAACT...GATCCCGAAACTACCTGTTACATTAGGGTGTACAATGTGTATGTGAGAATGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR GCA 90 bp CCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATAAGTTTAAAGCGATGCTaGCAGGTTCAGACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: PHILFTLSCTLSHSIWLISLKRC*QVQTGY
Trigger: GTAACCAGTCTGAACCTGGCAGCATCGCTTTAAACT...TATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGTTCGGTATGCATGCCTaGAACTGTTGCTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKFGMHA*NCCWRQ
Trigger: TTGTCTCCAGCAACAGTTCCAGGCATGCATACCGAA...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp GATCCACTAGCACATGTGGTTTATCATAACCAAAGGAGGTGGGGGCTTTTATTACATAACCAAAGGAGGTaGGGGCTTTTATTACGGTTA +
Preference number: 4 (lower is better)
Translates to: DPLAHVVYHNQRRWGLLLHNQRR*GLLLRL
Trigger: TAACCGTAATAAAAGCCCCCACCTCCTTTGGTTATG...TAATAAAAGCCCCCACCTCCTTTGGTTATGATAAACCACATGTGCTAGTGGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGATCCGTTCTGAGAAATaGAGAAATGTCCCCTTAGGC +
Preference number: 4 (lower is better)
Translates to: QAKSENATHPLYAFMYTKIRSEK*RNVPLG
Trigger: GCCTAAGGGGACATTTCTCCATTTCTCAGAACGGAT...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644894.1
ENST00000646898.1
CDS-3UTR CCA 90 bp ACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGATACAACAACACTCTGCTCTCTaGGGTGTGCAGGGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: TLSCTLSHSIWLIPTKIQQHSAL*GVQGFL
Trigger: TAAAAAGCCCTGCACACCCCAGAGAGCAGAGTGTTG...TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642390.1
ENST00000643119.1
ENST00000645045.1
3UTR CAA 72 bp TTTTTCCATCTCGGCATACAGCAAATTCTTCTGACTTaGCATAGGCAGATTCTTTTTGTCCAACCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: FFHLGIQQILLT*HRQILFVQPWL
Trigger: AAGCCAGGGTTGGACAAAAAGAATCTGCCTATGCAAAGTCAGAAGAATTTGCTGTATGCCGAGATGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR TCA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGGACCCAAAGAGAATTTaGTGGATCACCAACATGATC +
Preference number: 4 (lower is better)
Translates to: QAKSENATHPLYAFMYTKDPKRI*WITNMI
Trigger: GATCATGTTGGTGATCCATCAAATTCTCTTTGGGTC...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp AATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGACCCAAAGAGAATTTaGTGGATCACCAACATGATC +
Preference number: 4 (lower is better)
Translates to: NATHPLYAFMYTKSLHLVDPKRI*WITNMI
Trigger: GATCATGTTGGTGATCCATCAAATTCTCTTTGGGTC...AACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAGACCCAAAGAGAATTTaGTGGATCACCAACATGATC +
Preference number: 4 (lower is better)
Translates to: HILFTLSCTLSHSIWLIPDPKRI*WITNMI
Trigger: GATCATGTTGGTGATCCATCAAATTCTCTTTGGGTC...TGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CTCGTCACAATCATCTTCCTTCTGCGTGAGTATTTTATACTGGATCTCACTTCCCATCTTCCTTCTGCGTaGGTATTTTATACTGGATCT +
Preference number: 4 (lower is better)
Translates to: LVTIIFLLREYFILDLTSHLPSA*VFYTGS
Trigger: AGATCCAGTATAAAATACTCACGCAGAAGGAAGATG...GGAAGTGAGATCCAGTATAAAATACTCACGCAGAAGGAAGATGATTGTGACGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR TCA 90 bp AATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGCTGAAACACAGTACTaGGAATTCAGTGAGGATACT +
Preference number: 4 (lower is better)
Translates to: NATHPLYAFMYTKSLHLVAETQY*EFSEDT
Trigger: AGTATCCTCACTGAATTCTCAGTACTGTGTTTCAGC...AACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp AGCAGAAAACTGTCCAGGAAAATCAGACTTCAAAGTTGGTGCAACTTAGCTGATGCTGAAACACAGTACTaGGAATTCAGTGAGGATACT +
Preference number: 4 (lower is better)
Translates to: SRKLSRKIRLQSWCNLADAETQY*EFSEDT
Trigger: AGTATCCTCACTGAATTCTCAGTACTGTGTTTCAGC...ATCAGCTAAGTTGCACCAACTTTGAAGTCTGATTTTCCTGGACAGTTTTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATAGCTGAAACACAGTACTaGGAATTCAGTGAGGATACT +
Preference number: 4 (lower is better)
Translates to: PHILFTLSCTLSHSIWLIAETQY*EFSEDT
Trigger: AGTATCCTCACTGAATTCTCAGTACTGTGTTTCAGC...TATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp AAAGTTCTTCTGTATGTTCCACTTTTCCTGGATTGTCTTCGGTATGCATGCCTGGAACAATTTCTGGAGTaGTACGAGTTTAAAGCGATG +
Preference number: 4 (lower is better)
Translates to: KVLLYVPLFLDCLRYACLEQFLE*YEFKAM
Trigger: CATCGCTTTAAACTCGTATCACTCCAGAAATTGTTC...CAGGCATGCATACCGAAGACAATCCAGGAAAAGTGGAACATACAGAAGAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR TCA 90 bp ATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGGAACAATTTCTGGAGTaGTACGAGTTTAAAGCGATG +
Preference number: 4 (lower is better)
Translates to: MPHILFTLSCTLSHSIWLEQFLE*YEFKAM
Trigger: CATCGCTTTAAACTCGTATCACTCCAGAAATTGTTC...CAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTCTTTTATTACGGTTATaGGCTCTTGTCCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVLLLRL*ALVLLF
Trigger: AAACAGAAGGACAAGAGCTCATAACCGTAATAAAAG...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTGTCACTCCATTTGGTTaGTACCAACTAAGATACAAT +
Preference number: 4 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVVTPFG*YQLRYN
Trigger: ATTGTATCTTAGTTGGTATCAACCAAATGGAGTGAC...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp ACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGATACAAACGAGTTTAAAGCGATaGTGCCAGGTTCAGACTGGT +
Preference number: 4 (lower is better)
Translates to: TLSCTLSHSIWLIPTKIQTSLKR*CQVQTG
Trigger: ACCAGTCTGAACCTGGCAGCATCGCTTTAAACTCGT...TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp ATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGAGACTTCAAAGTTGGTaGAACTTAGCTGATCTCATG +
Preference number: 4 (lower is better)
Translates to: MPHILFTLSCTLSHSIWLRLQSW*NLADLM
Trigger: CATGAGATCAGCTAAGTTGCACCAACTTTGAAGTCT...CAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp TTTCGGGATCATAATCGACTTCCTGCTCGTCTCCATTTACAAAAACTGAAGGGTTCTAAGGAAAATGGCTaGTATGACGTGATGAGTGAT +
Preference number: 4 (lower is better)
Translates to: FRDHNRLPARLHLQKLKGSKENG*YDVMSD
Trigger: ATCACTCATCACGTCATACCAGCCATTTTCCTTAGA...ACCCTTCAGTTTTTGTAAATGGAGACGAGCAGGAAGTCGATTATGATCCCGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp ACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGATACAATTCGGTATGCATGCCTaGAACTGTTGCTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: TLSCTLSHSIWLIPTKIQFGMHA*NCCWRQ
Trigger: TTGTCTCCAGCAACAGTTCCAGGCATGCATACCGAA...TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTTATCAAAACCATTTCTaGAGTGATCACTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVYQNHF*SDHSQN
Trigger: GTTCTGAGAGTGATCACTCCAGAAATGGTTTTGATA...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCACATAACCAAAGGAGGTaGGGGCTTTTATTACGGTTA +
Preference number: 4 (lower is better)
Translates to: HILFTLSCTLSHSIWLIPHNQRR*GLLLRL
Trigger: TAACCGTAATAAAAGCCCCCACCTCCTTTGGTTATG...TGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp TACCGCTATCATCCACAAGTAGATCCACTAGCACATGTGGTTTATCATAACCAACATAACCAAAGGAGGTaGGGGCTTTTATTACGGTTA +
Preference number: 4 (lower is better)
Translates to: YRYHPQVDPLAHVVYHNQHNQRR*GLLLRL
Trigger: TAACCGTAATAAAAGCCCCCACCTCCTTTGGTTATG...TTGGTTATGATAAACCACATGTGCTAGTGGATCTACTTGTGGATGATAGCGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp AGCAGAAAACTGTCCAGGAAAATCAGACTTCAAAGTTGGTGCAACTTAGCTGATCATAACCAAAGGAGGTaGGGGCTTTTATTACGGTTA +
Preference number: 4 (lower is better)
Translates to: SRKLSRKIRLQSWCNLADHNQRR*GLLLRL
Trigger: TAACCGTAATAAAAGCCCCCACCTCCTTTGGTTATG...ATCAGCTAAGTTGCACCAACTTTGAAGTCTGATTTTCCTGGACAGTTTTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGCATCTTCCTTCTGCGTaGGTATTTTATACTGGATCT +
Preference number: 4 (lower is better)
Translates to: QAKSENATHPLYAFMYTKHLPSA*VFYTGS
Trigger: AGATCCAGTATAAAATACTCACGCAGAAGGAAGATG...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp ACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGATACAAATCGCTAACTGGCACTaGATCTCGTCACAATCATCT +
Preference number: 4 (lower is better)
Translates to: TLSCTLSHSIWLIPTKIQIANWH*ISSQSS
Trigger: AGATGATTGTGACGAGATTCAGTGCCAGTTAGCGAT...TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp AAACAGATGAATACCAGGCTAAGCACTAGAAAGAGTAGTAAAGCAGCAACAACTGCTGAAACACAGTACTaGGAATTCAGTGAGGATACT +
Preference number: 4 (lower is better)
Translates to: KQMNTRLSTRKSSKAATTAETQY*EFSEDT
Trigger: AGTATCCTCACTGAATTCTCAGTACTGTGTTTCAGC...AGTTGTTGCTGCTTTACTACTCTTTCTAGTGCTTAGCCTGGTATTCATCTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR TCA 90 bp CACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAGAACAATTTCTGGAGTaGTACGAGTTTAAAGCGATG +
Preference number: 4 (lower is better)
Translates to: HILFTLSCTLSHSIWLIPEQFLE*YEFKAM
Trigger: CATCGCTTTAAACTCGTATCACTCCAGAAATTGTTC...TGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGGAACAATTTCTGGAGTaGTACGAGTTTAAAGCGATG +
Preference number: 4 (lower is better)
Translates to: QAKSENATHPLYAFMYTKEQFLE*YEFKAM
Trigger: CATCGCTTTAAACTCGTATCACTCCAGAAATTGTTC...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATAGAACAATTTCTGGAGTaGTACGAGTTTAAAGCGATG +
Preference number: 4 (lower is better)
Translates to: PHILFTLSCTLSHSIWLIEQFLE*YEFKAM
Trigger: CATCGCTTTAAACTCGTATCACTCCAGAAATTGTTC...TATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp ATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGAAACCATTTCTGGAGTaGTCACTCTCAGAACAATTT +
Preference number: 4 (lower is better)
Translates to: MPHILFTLSCTLSHSIWLKPFLE*SLSEQF
Trigger: AAATTGTTCTGAGAGTGATCACTCCAGAAATGGTTT...CAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp ACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGATACAAAGTTTAAAGCGATGCTaGCAGGTTCAGACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: TLSCTLSHSIWLIPTKIQSLKRC*QVQTGY
Trigger: GTAACCAGTCTGAACCTGGCAGCATCGCTTTAAACT...TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp CCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATAAGACTTCAAAGTTGGTaGAACTTAGCTGATCTCATG +
Preference number: 4 (lower is better)
Translates to: PHILFTLSCTLSHSIWLIRLQSW*NLADLM
Trigger: CATGAGATCAGCTAAGTTGCACCAACTTTGAAGTCT...TATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGAGACTTCAAAGTTGGTaGAACTTAGCTGATCTCATG +
Preference number: 4 (lower is better)
Translates to: QAKSENATHPLYAFMYTKRLQSW*NLADLM
Trigger: CATGAGATCAGCTAAGTTGCACCAACTTTGAAGTCT...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTTCTCAGAACAATTTCTaGAGTGATACGAGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVSQNNF*SDTSLK
Trigger: CTTTAAACTCGTATCACTCCAGAAATTGTTCTGAGA...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp ATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGTATCAAAACCATTTCTaGAGTGATCACTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: MPHILFTLSCTLSHSIWLYQNHF*SDHSQN
Trigger: GTTCTGAGAGTGATCACTCCAGAAATGGTTTTGATA...CAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTTTTGGAATCTTCTGTTaGTCTATAACCAATCAAGGA +
Preference number: 4 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVFGIFC*SITNQG
Trigger: TCCTTGATTGGTTATAGACCAACAGAAGATTCCAAA...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp ACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGATACAAGACCCAAAGAGAATTTaGTGGATCACCAACATGATC +
Preference number: 4 (lower is better)
Translates to: TLSCTLSHSIWLIPTKIQDPKRI*WITNMI
Trigger: GATCATGTTGGTGATCCATCAAATTCTCTTTGGGTC...TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp AAACAGATGAATACCAGGCTAAGCACTAGAAAGAGTAGTAAAGCAGCAACAACTCATCTTCCTTCTGCGTaGGTATTTTATACTGGATCT +
Preference number: 4 (lower is better)
Translates to: KQMNTRLSTRKSSKAATTHLPSA*VFYTGS
Trigger: AGATCCAGTATAAAATACTCACGCAGAAGGAAGATG...AGTTGTTGCTGCTTTACTACTCTTTCTAGTGCTTAGCCTGGTATTCATCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR TCA 90 bp AAATTCTTTGGAATCTTCTGTTGGTCTATAACCAATCAAGGACTCTTTACCGCTGCTGAAACACAGTACTaGGAATTCAGTGAGGATACT +
Preference number: 4 (lower is better)
Translates to: KFFGIFCWSITNQGLFTAAETQY*EFSEDT
Trigger: AGTATCCTCACTGAATTCTCAGTACTGTGTTTCAGC...AGCGGTAAAGAGTCCTTGATTGGTTATAGACCAACAGAAGATTCCAAAGAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR TCA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGGAACAATTTCTGGAGTaGTACGAGTTTAAAGCGATG +
Preference number: 4 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKEQFLE*YEFKAM
Trigger: CATCGCTTTAAACTCGTATCACTCCAGAAATTGTTC...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAAAACCATTTCTGGAGTaGTCACTCTCAGAACAATTT +
Preference number: 4 (lower is better)
Translates to: HILFTLSCTLSHSIWLIPKPFLE*SLSEQF
Trigger: AAATTGTTCTGAGAGTGATCACTCCAGAAATGGTTT...TGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp GTTCATTCTCACATACACATTGTACACCCTAATGTAACAGGTAGTTTCGGGATCAAACCATTTCTGGAGTaGTCACTCTCAGAACAATTT +
Preference number: 4 (lower is better)
Translates to: VHSHIHIVHPNVTGSFGIKPFLE*SLSEQF
Trigger: AAATTGTTCTGAGAGTGATCACTCCAGAAATGGTTT...GATCCCGAAACTACCTGTTACATTAGGGTGTACAATGTGTATGTGAGAATGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR TCA 90 bp AGCAGAAAACTGTCCAGGAAAATCAGACTTCAAAGTTGGTGCAACTTAGCTGATAAACCATTTCTGGAGTaGTCACTCTCAGAACAATTT +
Preference number: 4 (lower is better)
Translates to: SRKLSRKIRLQSWCNLADKPFLE*SLSEQF
Trigger: AAATTGTTCTGAGAGTGATCACTCCAGAAATGGTTT...ATCAGCTAAGTTGCACCAACTTTGAAGTCTGATTTTCCTGGACAGTTTTCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATAAAACCATTTCTGGAGTaGTCACTCTCAGAACAATTT +
Preference number: 4 (lower is better)
Translates to: PHILFTLSCTLSHSIWLIKPFLE*SLSEQF
Trigger: AAATTGTTCTGAGAGTGATCACTCCAGAAATGGTTT...TATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp TACCGCTATCATCCACAAGTAGATCCACTAGCACATGTGGTTTATCATAACCAACTTTTATTACGGTTATaGGCTCTTGTCCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: YRYHPQVDPLAHVVYHNQLLLRL*ALVLLF
Trigger: AAACAGAAGGACAAGAGCTCATAACCGTAATAAAAG...TTGGTTATGATAAACCACATGTGCTAGTGGATCTACTTGTGGATGATAGCGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR TCA 90 bp CTAGAAAGTTCTTCTGTATGTTCCACTTTTCCTGGATTGTCTTCGGTATGCATGCTTTTATTACGGTTATaGGCTCTTGTCCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LESSSVCSTFPGLSSVCMLLLRL*ALVLLF
Trigger: AAACAGAAGGACAAGAGCTCATAACCGTAATAAAAG...CATGCATACCGAAGACAATCCAGGAAAAGTGGAACATACAGAAGAACTTTCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR TCA 90 bp AGCAGAAAACTGTCCAGGAAAATCAGACTTCAAAGTTGGTGCAACTTAGCTGATCTTTTATTACGGTTATaGGCTCTTGTCCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: SRKLSRKIRLQSWCNLADLLLRL*ALVLLF
Trigger: AAACAGAAGGACAAGAGCTCATAACCGTAATAAAAG...ATCAGCTAAGTTGCACCAACTTTGAAGTCTGATTTTCCTGGACAGTTTTCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp AATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTCTTTTATTACGGTTATaGGCTCTTGTCCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: NATHPLYAFMYTKSLHLVLLLRL*ALVLLF
Trigger: AAACAGAAGGACAAGAGCTCATAACCGTAATAAAAG...AACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp AATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGTCACTCCATTTGGTTaGTACCAACTAAGATACAAT +
Preference number: 4 (lower is better)
Translates to: NATHPLYAFMYTKSLHLVVTPFG*YQLRYN
Trigger: ATTGTATCTTAGTTGGTATCAACCAAATGGAGTGAC...AACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR TCA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGGTCACTCCATTTGGTTaGTACCAACTAAGATACAAT +
Preference number: 4 (lower is better)
Translates to: QAKSENATHPLYAFMYTKVTPFG*YQLRYN
Trigger: ATTGTATCTTAGTTGGTATCAACCAAATGGAGTGAC...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp TTTCGGGATCATAATCGACTTCCTGCTCGTCTCCATTTACAAAAACTGAAGGGTATGTCAATCATGATTTaGTTCTCCTCCTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: FRDHNRLPARLHLQKLKGMSIMI*FSSFLI
Trigger: TATCAGAAAGGAGGAGAAGCAAATCATGATTGACAT...ACCCTTCAGTTTTTGTAAATGGAGACGAGCAGGAAGTCGATTATGATCCCGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR GCA 90 bp TGCAACTTAGCTGATCTCATGAAAATTCTTTGGAATCTTCTGTTGGTCTATAACAGTTTAAAGCGATGCTaGCAGGTTCAGACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: CNLADLMKILWNLLLVYNSLKRC*QVQTGY
Trigger: GTAACCAGTCTGAACCTGGCAGCATCGCTTTAAACT...GTTATAGACCAACAGAAGATTCCAAAGAATTTTCATGAGATCAGCTAAGTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR GCA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGAGACTTCAAAGTTGGTaGAACTTAGCTGATCTCATG +
Preference number: 4 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKRLQSW*NLADLM
Trigger: CATGAGATCAGCTAAGTTGCACCAACTTTGAAGTCT...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp ACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGATACAAACCTGTGGCATGATCTaGTACTCCCAATATACGATA +
Preference number: 4 (lower is better)
Translates to: TLSCTLSHSIWLIPTKIQTCGMI*YSQYTI
Trigger: TATCGTATATTGGGAGTACCAGATCATGCCACAGGT...TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGTCTAAGGAAAATGGCTaGTATGACGTGATGAGTGAT +
Preference number: 4 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKSKENG*YDVMSD
Trigger: ATCACTCATCACGTCATACCAGCCATTTTCCTTAGA...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp AGCAGAAAACTGTCCAGGAAAATCAGACTTCAAAGTTGGTGCAACTTAGCTGATTATCAAAACCATTTCTaGAGTGATCACTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: SRKLSRKIRLQSWCNLADYQNHF*SDHSQN
Trigger: GTTCTGAGAGTGATCACTCCAGAAATGGTTTTGATA...ATCAGCTAAGTTGCACCAACTTTGAAGTCTGATTTTCCTGGACAGTTTTCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTATCAAAACCATTTCTaGAGTGATCACTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: QAKSENATHPLYAFMYTKYQNHF*SDHSQN
Trigger: GTTCTGAGAGTGATCACTCCAGAAATGGTTTTGATA...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp ACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGATACAACATAACCAAAGGAGGTaGGGGCTTTTATTACGGTTA +
Preference number: 4 (lower is better)
Translates to: TLSCTLSHSIWLIPTKIQHNQRR*GLLLRL
Trigger: TAACCGTAATAAAAGCCCCCACCTCCTTTGGTTATG...TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp AAAGTTCTTCTGTATGTTCCACTTTTCCTGGATTGTCTTCGGTATGCATGCCTGTTTGGAATCTTCTGTTaGTCTATAACCAATCAAGGA +
Preference number: 4 (lower is better)
Translates to: KVLLYVPLFLDCLRYACLFGIFC*SITNQG
Trigger: TCCTTGATTGGTTATAGACCAACAGAAGATTCCAAA...CAGGCATGCATACCGAAGACAATCCAGGAAAAGTGGAACATACAGAAGAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp ATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGTTTGGAATCTTCTGTTaGTCTATAACCAATCAAGGA +
Preference number: 4 (lower is better)
Translates to: MPHILFTLSCTLSHSIWLFGIFC*SITNQG
Trigger: TCCTTGATTGGTTATAGACCAACAGAAGATTCCAAA...CAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAAATTGTAACATTAGTTaGTGTAGGCAAGTCATGCGT +
Preference number: 4 (lower is better)
Translates to: HILFTLSCTLSHSIWLIPNCNIS*CRQVMR
Trigger: ACGCATGACTTGCCTACACCAACTAATGTTACAATT...TGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644894.1
CDS-3UTR CCA 90 bp AGCAGAAAACTGTCCAGGAAAATCAGACTTCAAAGTTGGTGCAACTTAGCTGATCTAAAGATTGAACAATaGAGCCACACATTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: SRKLSRKIRLQSWCNLADLKIEQ*SHTFQF
Trigger: AAACTGGAATGTGTGGCTCCATTGTTCAATCTTTAG...ATCAGCTAAGTTGCACCAACTTTGAAGTCTGATTTTCCTGGACAGTTTTCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642390.1
ENST00000643119.1
ENST00000645045.1
CDS-3UTR TCA 90 bp ACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGATACAACATCTTCCTTCTGCGTaGGTATTTTATACTGGATCT +
Preference number: 4 (lower is better)
Translates to: TLSCTLSHSIWLIPTKIQHLPSA*VFYTGS
Trigger: AGATCCAGTATAAAATACTCACGCAGAAGGAAGATG...TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp CCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATAATGTCAATCATGATTTaGTTCTCCTCCTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: PHILFTLSCTLSHSIWLIMSIMI*FSSFLI
Trigger: TATCAGAAAGGAGGAGAAGCAAATCATGATTGACAT...TATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR GCA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGATGTCAATCATGATTTaGTTCTCCTCCTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: QAKSENATHPLYAFMYTKMSIMI*FSSFLI
Trigger: TATCAGAAAGGAGGAGAAGCAAATCATGATTGACAT...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp AGCAGAAAACTGTCCAGGAAAATCAGACTTCAAAGTTGGTGCAACTTAGCTGATTCTCAGAACAATTTCTaGAGTGATACGAGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: SRKLSRKIRLQSWCNLADSQNNF*SDTSLK
Trigger: CTTTAAACTCGTATCACTCCAGAAATTGTTCTGAGA...ATCAGCTAAGTTGCACCAACTTTGAAGTCTGATTTTCCTGGACAGTTTTCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp ACTCTTTACCGCTATCATCCACAAGTAGATCCACTAGCACATGTGGTTTATCATTCTCAGAACAATTTCTaGAGTGATACGAGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: TLYRYHPQVDPLAHVVYHSQNNF*SDTSLK
Trigger: CTTTAAACTCGTATCACTCCAGAAATTGTTCTGAGA...ATGATAAACCACATGTGCTAGTGGATCTACTTGTGGATGATAGCGGTAAAGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp GTTCATTCTCACATACACATTGTACACCCTAATGTAACAGGTAGTTTCGGGATCTCTCAGAACAATTTCTaGAGTGATACGAGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: VHSHIHIVHPNVTGSFGISQNNF*SDTSLK
Trigger: CTTTAAACTCGTATCACTCCAGAAATTGTTCTGAGA...GATCCCGAAACTACCTGTTACATTAGGGTGTACAATGTGTATGTGAGAATGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp CCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATATCTCAGAACAATTTCTaGAGTGATACGAGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: PHILFTLSCTLSHSIWLISQNNF*SDTSLK
Trigger: CTTTAAACTCGTATCACTCCAGAAATTGTTCTGAGA...TATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCTCAGAACAATTTCTaGAGTGATACGAGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: QAKSENATHPLYAFMYTKSQNNF*SDTSLK
Trigger: CTTTAAACTCGTATCACTCCAGAAATTGTTCTGAGA...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGTATCAAAACCATTTCTaGAGTGATCACTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKYQNHF*SDHSQN
Trigger: GTTCTGAGAGTGATCACTCCAGAAATGGTTTTGATA...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTTTGGAATCTTCTGTTaGTCTATAACCAATCAAGGA +
Preference number: 4 (lower is better)
Translates to: QAKSENATHPLYAFMYTKFGIFC*SITNQG
Trigger: TCCTTGATTGGTTATAGACCAACAGAAGATTCCAAA...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp AGCAGAAAACTGTCCAGGAAAATCAGACTTCAAAGTTGGTGCAACTTAGCTGATTTTGGAATCTTCTGTTaGTCTATAACCAATCAAGGA +
Preference number: 4 (lower is better)
Translates to: SRKLSRKIRLQSWCNLADFGIFC*SITNQG
Trigger: TCCTTGATTGGTTATAGACCAACAGAAGATTCCAAA...ATCAGCTAAGTTGCACCAACTTTGAAGTCTGATTTTCCTGGACAGTTTTCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGCTAAAGATTGAACAATaGAGCCACACATTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKLKIEQ*SHTFQF
Trigger: AAACTGGAATGTGTGGCTCCATTGTTCAATCTTTAG...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642390.1
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp AATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTATCACAATTATATTATaGCCAAGTCATGCGTCACTT +
Preference number: 4 (lower is better)
Translates to: NATHPLYAFMYTKSLHLVITIIL*PSHASL
Trigger: AAGTGACGCATGACTTGGCCATAATATAATTGTGAT...AACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646898.1
CDS-3UTR TCA 90 bp AGTATCAAAACCATTTCTGGAGTGATCACTCTCAGAACAATTTCTGGAGTGATAGTCACTCCATTTGGTTaGTACCAACTAAGATACAAT +
Preference number: 4 (lower is better)
Translates to: SIKTISGVITLRTISGVIVTPFG*YQLRYN
Trigger: ATTGTATCTTAGTTGGTATCAACCAAATGGAGTGAC...TATCACTCCAGAAATTGTTCTGAGAGTGATCACTCCAGAAATGGTTTTGATACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR GCA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGATGTCAATCATGATTTaGTTCTCCTCCTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKMSIMI*FSSFLI
Trigger: TATCAGAAAGGAGGAGAAGCAAATCATGATTGACAT...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp TGCAACTTAGCTGATCTCATGAAAATTCTTTGGAATCTTCTGTTGGTCTATAACTCTAAGGAAAATGGCTaGTATGACGTGATGAGTGAT +
Preference number: 4 (lower is better)
Translates to: CNLADLMKILWNLLLVYNSKENG*YDVMSD
Trigger: ATCACTCATCACGTCATACCAGCCATTTTCCTTAGA...GTTATAGACCAACAGAAGATTCCAAAGAATTTTCATGAGATCAGCTAAGTTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp AGTCACCACTTCTGTTATACTAGAAAGTTCTTCTGTATGTTCCACTTTTCCTGGTTTGGAATCTTCTGTTaGTCTATAACCAATCAAGGA +
Preference number: 4 (lower is better)
Translates to: SHHFCYTRKFFCMFHFSWFGIFC*SITNQG
Trigger: TCCTTGATTGGTTATAGACCAACAGAAGATTCCAAA...CCAGGAAAAGTGGAACATACAGAAGAACTTTCTAGTATAACAGAAGTGGTGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CCA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGTTTGGAATCTTCTGTTaGTCTATAACCAATCAAGGA +
Preference number: 4 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKFGIFC*SITNQG
Trigger: TCCTTGATTGGTTATAGACCAACAGAAGATTCCAAA...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp ACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGATACAATCTCAGAACAATTTCTaGAGTGATACGAGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: TLSCTLSHSIWLIPTKIQSQNNF*SDTSLK
Trigger: CTTTAAACTCGTATCACTCCAGAAATTGTTCTGAGA...TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CCA 90 bp ACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGATACAACTAAGTCACTCCATTTaGTTGATACCAACTAAGATA +
Preference number: 4 (lower is better)
Translates to: TLSCTLSHSIWLIPTKIQLSHSI*LIPTKI
Trigger: TATCTTAGTTGGTATCAACCAAATGGAGTGACTTAG...TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
3UTR CAA 72 bp TTAGCTGATCTCATGAAAATTCTTTGGAATCTTCTGTaGGTCTATAACCAATCAAGGACTCTTTACCGCTAT +
Preference number: 4 (lower is better)
Translates to: LADLMKILWNLL*VYNQSRTLYRY
Trigger: ATAGCGGTAAAGAGTCCTTGATTGGTTATAGACCAACAGAAGATTCCAAAGAATTTTCATGAGATCAGCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CAA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTAAGCGGCGTGATTTGTaGTGGCGGCAACCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: EVATKVPGASPAHLGTRSKRRDL*WRQPGK
Trigger: CTTCCCTGGTTGCCGCCACAACAAATCACGCCGCTT...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642390.1
ENST00000644894.1
ENST00000646036.1
ENST00000646898.1
CDS-3UTR CAA 90 bp GTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTAAGCGGCGTGATTTGTaGTGGCGGCAACCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: VATKVPGASPAHLGTRSTKRRDL*WRQPGK
Trigger: CTTCCCTGGTTGCCGCCACAACAAATCACGCCGCTT...AGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642390.1
ENST00000644894.1
ENST00000646036.1
ENST00000646898.1
CDS-3UTR CAA 90 bp AGTGAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGGCATGCCTGGAACTGTaGCTGGAGACAACGGCTCTT +
Preference number: 5 (lower is better)
Translates to: SEVATKVPGASPAHLGTRACLEL*LETTAL
Trigger: AAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATGC...CCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTGCATGCCTGGAACTGTaGCTGGAGACAACGGCTCTT +
Preference number: 5 (lower is better)
Translates to: EVATKVPGASPAHLGTRSACLEL*LETTAL
Trigger: AAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATGC...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp GTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGCATGCCTGGAACTGTaGCTGGAGACAACGGCTCTT +
Preference number: 5 (lower is better)
Translates to: VATKVPGASPAHLGTRSTACLEL*LETTAL
Trigger: AAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATGC...AGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTTCCACTTTTCCTGGATaGTCTTCGGTATGCATGCCT +
Preference number: 5 (lower is better)
Translates to: EVATKVPGASPAHLGTRSSTFPG*SSVCMP
Trigger: AGGCATGCATACCGAAGACAATCCAGGAAAAGTGGA...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp GGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTAACTCTCTCTCTCTATaGGAGTCAGATGGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: GASPAHLGTRSTGYCSVTNSLSL*ESDGCP
Trigger: CGGGCAGCCATCTGACTCCAATAGAGAGAGAGAGTT...AGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp CCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTAGCATGCCTGGAACTGTaGCTGGAGACAACGGCTCTT +
Preference number: 5 (lower is better)
Translates to: PAHLGTRSTGYCSVTGNLACLEL*LETTAL
Trigger: AAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATGC...TAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp AGTGAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGATAGGCAGATTCTTTTaGTCCAACCCTGGCTTTAAC +
Preference number: 5 (lower is better)
Translates to: SEVATKVPGASPAHLGTRIGRFF*SNPGFN
Trigger: GTTAAAGCCAGGGTTGGACAAAAAGAATCTGCCTAT...CCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp GAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTCTTTGGAATCTTCTGTaGGTCTATAACCAATCAAGG +
Preference number: 5 (lower is better)
Translates to: EVATKVPGASPAHLGTRSLWNLL*VYNQSR
Trigger: CCTTGATTGGTTATAGACCAACAGAAGATTCCAAAG...ACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp GTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTCTTTGGAATCTTCTGTaGGTCTATAACCAATCAAGG +
Preference number: 5 (lower is better)
Translates to: VATKVPGASPAHLGTRSTLWNLL*VYNQSR
Trigger: CCTTGATTGGTTATAGACCAACAGAAGATTCCAAAG...AGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTGCATGCCTGGAACTGTaGCTGGAGACAACGGCTCTT +
Preference number: 5 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVACLEL*LETTAL
Trigger: AAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATGC...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp GAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGCATGCCTGGAACTGTaGCTGGAGACAACGGCTCTT +
Preference number: 5 (lower is better)
Translates to: EPGVLDTVPLLVTYLDVKACLEL*LETTAL
Trigger: AAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATGC...CTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp GTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTTACGGTTATGAGCTCTaGTCCTTCTGTTTTTATTTC +
Preference number: 5 (lower is better)
Translates to: VATKVPGASPAHLGTRSTYGYEL*SFCFYF
Trigger: GAAATAAAAACAGAAGGACAAGAGCTCATAACCGTA...AGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp GTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTAGTCACTCCATTTGGTaGATACCAACTAAGATACAA +
Preference number: 5 (lower is better)
Translates to: VATKVPGASPAHLGTRSTSHSIW*IPTKIQ
Trigger: TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACT...AGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp AGTGAAGTGGCTACAAAGGTCCCTGGGGCATCACCTGCTCACCTAGGAACCAGGAGTCACTCCATTTGGTaGATACCAACTAAGATACAA +
Preference number: 5 (lower is better)
Translates to: SEVATKVPGASPAHLGTRSHSIW*IPTKIQ
Trigger: TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACT...CCTGGTTCCTAGGTGAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp ATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGGCATGCCTGGAACTGTaGCTGGAGACAACGGCTCTT +
Preference number: 5 (lower is better)
Translates to: MPHILFTLSCTLSHSIWLACLEL*LETTAL
Trigger: AAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATGC...CAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp AGCAGAAAACTGTCCAGGAAAATCAGACTTCAAAGTTGGTGCAACTTAGCTGATAACAAGCGGCGTGATTaGTTGTGGCGGCAACCAGGG +
Preference number: 5 (lower is better)
Translates to: SRKLSRKIRLQSWCNLADNKRRD*LWRQPG
Trigger: CCCTGGTTGCCGCCACAACAAATCACGCCGCTTGTT...ATCAGCTAAGTTGCACCAACTTTGAAGTCTGATTTTCCTGGACAGTTTTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642390.1
ENST00000644894.1
ENST00000646036.1
ENST00000646898.1
CDS-3UTR CAA 90 bp AATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTAACAAGCGGCGTGATTaGTTGTGGCGGCAACCAGGG +
Preference number: 5 (lower is better)
Translates to: NATHPLYAFMYTKSLHLVNKRRD*LWRQPG
Trigger: CCCTGGTTGCCGCCACAACAAATCACGCCGCTTGTT...AACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642390.1
ENST00000644894.1
ENST00000646036.1
ENST00000646898.1
CDS-3UTR CAA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGAACAAGCGGCGTGATTaGTTGTGGCGGCAACCAGGG +
Preference number: 5 (lower is better)
Translates to: QAKSENATHPLYAFMYTKNKRRD*LWRQPG
Trigger: CCCTGGTTGCCGCCACAACAAATCACGCCGCTTGTT...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642390.1
ENST00000644894.1
ENST00000646036.1
ENST00000646898.1
CDS-3UTR CAA 90 bp CACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAGCATGCCTGGAACTGTaGCTGGAGACAACGGCTCTT +
Preference number: 5 (lower is better)
Translates to: HILFTLSCTLSHSIWLIPACLEL*LETTAL
Trigger: AAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATGC...TGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp GGGGCATCACCTGCTCACCTAGGAACCAGGAGTACTGGATACTGTTCCGTTACTTACGGTTATGAGCTCTaGTCCTTCTGTTTTTATTTC +
Preference number: 5 (lower is better)
Translates to: GASPAHLGTRSTGYCSVTYGYEL*SFCFYF
Trigger: GAAATAAAAACAGAAGGACAAGAGCTCATAACCGTA...AGTAACGGAACAGTATCCAGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGAAGCGGCGTGATTTGTaGTGGCGGCAACCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKKRRDL*WRQPGK
Trigger: CTTCCCTGGTTGCCGCCACAACAAATCACGCCGCTT...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642390.1
ENST00000644894.1
ENST00000646036.1
ENST00000646898.1
CDS-3UTR CAA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGGCATGCCTGGAACTGTaGCTGGAGACAACGGCTCTT +
Preference number: 5 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKACLEL*LETTAL
Trigger: AAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATGC...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTTCCACTTTTCCTGGATaGTCTTCGGTATGCATGCCT +
Preference number: 5 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVSTFPG*SSVCMP
Trigger: AGGCATGCATACCGAAGACAATCCAGGAAAAGTGGA...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp CACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAAACTCTCTCTCTCTATaGGAGTCAGATGGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: HILFTLSCTLSHSIWLIPNSLSL*ESDGCP
Trigger: CGGGCAGCCATCTGACTCCAATAGAGAGAGAGAGTT...TGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp CCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATAAACTCTCTCTCTCTATaGGAGTCAGATGGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: PHILFTLSCTLSHSIWLINSLSL*ESDGCP
Trigger: CGGGCAGCCATCTGACTCCAATAGAGAGAGAGAGTT...TATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp AGCAGAAAACTGTCCAGGAAAATCAGACTTCAAAGTTGGTGCAACTTAGCTGATAACTCTCTCTCTCTATaGGAGTCAGATGGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: SRKLSRKIRLQSWCNLADNSLSL*ESDGCP
Trigger: CGGGCAGCCATCTGACTCCAATAGAGAGAGAGAGTT...ATCAGCTAAGTTGCACCAACTTTGAAGTCTGATTTTCCTGGACAGTTTTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp ACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGATACAAAAGCGGCGTGATTTGTaGTGGCGGCAACCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: TLSCTLSHSIWLIPTKIQKRRDL*WRQPGK
Trigger: CTTCCCTGGTTGCCGCCACAACAAATCACGCCGCTT...TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642390.1
ENST00000644894.1
ENST00000646036.1
ENST00000646898.1
CDS TCA 90 bp ATATTATGGCCAAGTCATGCGTCACTTAACGATGGAGATCCGTTCTaGGAAATGGAGAAATGTCCCCTTAGGCAATTTCTTCGGGCAGTA +
Preference number: 5 (lower is better)
Translates to: ILWPSHASLNDGDPF*EMEKCPLRQFLRAV
Trigger: TACTGCCCGAAGAAATTGCCTAAGGGGACATTTCTCCATTTCTCAGAACGGATCTCCATCGTTAAGTGACGCATGACTTGGCCATAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646898.1
CDS-3UTR CAA 90 bp TTTCGGGATCATAATCGACTTCCTGCTCGTCTCCATTTACAAAAACTGAAGGGTTCCACTTTTCCTGGATaGTCTTCGGTATGCATGCCT +
Preference number: 5 (lower is better)
Translates to: FRDHNRLPARLHLQKLKGSTFPG*SSVCMP
Trigger: AGGCATGCATACCGAAGACAATCCAGGAAAAGTGGA...ACCCTTCAGTTTTTGTAAATGGAGACGAGCAGGAAGTCGATTATGATCCCGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CAA 90 bp AAACAGATGAATACCAGGCTAAGCACTAGAAAGAGTAGTAAAGCAGCAACAACTAACTCTCTCTCTCTATaGGAGTCAGATGGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: KQMNTRLSTRKSSKAATTNSLSL*ESDGCP
Trigger: CGGGCAGCCATCTGACTCCAATAGAGAGAGAGAGTT...AGTTGTTGCTGCTTTACTACTCTTTCTAGTGCTTAGCCTGGTATTCATCTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS CCA 90 bp CACTCACCCATAGTTCTTTACCTCTACGGTAAAAACAGGGACCTGTaGCATGATCTGGTACTCCCAATATACGATAGGGTTCATGTTATA +
Preference number: 5 (lower is better)
Translates to: HSPIVLYLYGKNRDL*HDLVLPIYDRVHVI
Trigger: TATAACATGAACCCTATCGTATATTGGGAGTACCAGATCATGCCACAGGTCCCTGTTTTTACCGTAGAGGTAAAGAACTATGGGTGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478333.1
CDS-3UTR CAA 90 bp TGCATAGGCAGATTCTTTTTGTCCAACCCTGGCTTTAACTCTGACCCAAAGAGAATAGGCAGATTCTTTTaGTCCAACCCTGGCTTTAAC +
Preference number: 5 (lower is better)
Translates to: CIGRFFLSNPGFNSDPKRIGRFF*SNPGFN
Trigger: GTTAAAGCCAGGGTTGGACAAAAAGAATCTGCCTAT...TCTCTTTGGGTCAGAGTTAAAGCCAGGGTTGGACAAAAAGAATCTGCCTATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CAA 90 bp AGCAGAAAACTGTCCAGGAAAATCAGACTTCAAAGTTGGTGCAACTTAGCTGATTCCACTTTTCCTGGATaGTCTTCGGTATGCATGCCT +
Preference number: 5 (lower is better)
Translates to: SRKLSRKIRLQSWCNLADSTFPG*SSVCMP
Trigger: AGGCATGCATACCGAAGACAATCCAGGAAAAGTGGA...ATCAGCTAAGTTGCACCAACTTTGAAGTCTGATTTTCCTGGACAGTTTTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp CACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCATCCACTTTTCCTGGATaGTCTTCGGTATGCATGCCT +
Preference number: 5 (lower is better)
Translates to: HILFTLSCTLSHSIWLIPSTFPG*SSVCMP
Trigger: AGGCATGCATACCGAAGACAATCCAGGAAAAGTGGA...TGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp AATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTTCCACTTTTCCTGGATaGTCTTCGGTATGCATGCCT +
Preference number: 5 (lower is better)
Translates to: NATHPLYAFMYTKSLHLVSTFPG*SSVCMP
Trigger: AGGCATGCATACCGAAGACAATCCAGGAAAAGTGGA...AACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp ACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGATACAAAACTCTCTCTCTCTATaGGAGTCAGATGGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: TLSCTLSHSIWLIPTKIQNSLSL*ESDGCP
Trigger: CGGGCAGCCATCTGACTCCAATAGAGAGAGAGAGTT...TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp ACAGGTAGTTTCGGGATCATAATCGACTTCCTGCTCGTCTCCATTTACAAAAACTTCAGAAAACATCTGTaGATAAGACTGAGGACGGCC +
Preference number: 5 (lower is better)
Translates to: TGSFGIIIDFLLVSIYKNFRKHL*IRLRTA
Trigger: GGCCGTCCTCAGTCTTATCAACAGATGTTTTCTGAA...GTTTTTGTAAATGGAGACGAGCAGGAAGTCGATTATGATCCCGAAACTACCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643119.1
CDS-3UTR CAA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGTCCACTTTTCCTGGATaGTCTTCGGTATGCATGCCT +
Preference number: 5 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKSTFPG*SSVCMP
Trigger: AGGCATGCATACCGAAGACAATCCAGGAAAAGTGGA...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp ACATTCCAGTTTCATCAACACTCTGCTCTCTGGGGTGTGCAGGGCTTTTTACAATACGGTTATGAGCTCTaGTCCTTCTGTTTTTATTTC +
Preference number: 5 (lower is better)
Translates to: TFQFHQHSALWGVQGFLQYGYEL*SFCFYF
Trigger: GAAATAAAAACAGAAGGACAAGAGCTCATAACCGTA...TTGTAAAAAGCCCTGCACACCCCAGAGAGCAGAGTGTTGATGAAACTGGAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CAA 90 bp GAACCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGCTTTGGAATCTTCTGTaGGTCTATAACCAATCAAGG +
Preference number: 5 (lower is better)
Translates to: EPGVLDTVPLLVTYLDVKLWNLL*VYNQSR
Trigger: CCTTGATTGGTTATAGACCAACAGAAGATTCCAAAG...CTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp CCAGGAGTACTGGATACTGTTCCGTTACTGGTAACCTATCTGGATGTAAAGGTTCTTTGGAATCTTCTGTaGGTCTATAACCAATCAAGG +
Preference number: 5 (lower is better)
Translates to: PGVLDTVPLLVTYLDVKVLWNLL*VYNQSR
Trigger: CCTTGATTGGTTATAGACCAACAGAAGATTCCAAAG...AACCTTTACATCCAGATAGGTTACCAGTAACGGAACAGTATCCAGTACTCCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp CCCACACATGTAAGACTCCTTCTGCTGAAACACAGTACTGAGAATTCAGTGAGGAGTCACTCCATTTGGTaGATACCAACTAAGATACAA +
Preference number: 5 (lower is better)
Translates to: PTHVRLLLLKHSTENSVRSHSIW*IPTKIQ
Trigger: TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACT...CCTCACTGAATTCTCAGTACTGTGTTTCAGCAGAAGGAGTCTTACATGTGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS GCA 90 bp GCATCTTTAGTACTTTTGGACCTCTATAAGCAGTTTAGAATGTTTTaGCACGTGGGAAGGCTGATGAAAGAACACAGTTGTGGAATTTCC +
Preference number: 5 (lower is better)
Translates to: ASLVLLDLYKQFRMF*HVGRLMKEHSCGIS
Trigger: GGAAATTCCACAACTGTGTTCTTTCATCAGCCTTCCCACGTGGCAAAACATTCTAAACTGCTTATAGAGGTCCAAAAGTACTAAAGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478333.1
CDS-3UTR CAA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGATAGGCAGATTCTTTTaGTCCAACCCTGGCTTTAAC +
Preference number: 5 (lower is better)
Translates to: QAKSENATHPLYAFMYTKIGRFF*SNPGFN
Trigger: GTTAAAGCCAGGGTTGGACAAAAAGAATCTGCCTAT...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS CCA 90 bp TTTAACTCCATAGTTCTTTACCTCTACGGTAAAAACAGGGACCTGTaGCATGATCTGGTACTCCCAATATACGATAGGGTTCATGTTATA +
Preference number: 5 (lower is better)
Translates to: FNSIVLYLYGKNRDL*HDLVLPIYDRVHVI
Trigger: TATAACATGAACCCTATCGTATATTGGGAGTACCAGATCATGCCACAGGTCCCTGTTTTTACCGTAGAGGTAAAGAACTATGGAGTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458076.5
CDS-3UTR CAA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGCTTTGGAATCTTCTGTaGGTCTATAACCAATCAAGG +
Preference number: 5 (lower is better)
Translates to: QAKSENATHPLYAFMYTKLWNLL*VYNQSR
Trigger: CCTTGATTGGTTATAGACCAACAGAAGATTCCAAAG...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp CCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACTTTGGAATCTTCTGTaGGTCTATAACCAATCAAGG +
Preference number: 5 (lower is better)
Translates to: PHILFTLSCTLSHSIWLILWNLL*VYNQSR
Trigger: CCTTGATTGGTTATAGACCAACAGAAGATTCCAAAG...TATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS CCA 90 bp ATATACGATAGGGTTCATGTTATAGGATTCAATTGTAACATTAGTTaGTGTAGGCAAGTCATGCGTCACTTAACGATGGAGATCCGTTCT +
Preference number: 5 (lower is better)
Translates to: IYDRVHVIGFNCNIS*CRQVMRHLTMEIRS
Trigger: AGAACGGATCTCCATCGTTAAGTGACGCATGACTTGCCTACACCAACTAATGTTACAATTGAATCCTATAACATGAACCCTATCGTATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644894.1
CDS-3UTR CAA 90 bp ACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGATACAAATAGGCAGATTCTTTTaGTCCAACCCTGGCTTTAAC +
Preference number: 5 (lower is better)
Translates to: TLSCTLSHSIWLIPTKIQIGRFF*SNPGFN
Trigger: GTTAAAGCCAGGGTTGGACAAAAAGAATCTGCCTAT...TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp AGTATCAAAACCATTTCTGGAGTGATCACTCTCAGAACAATTTCTGGAGTGATAATAGGCAGATTCTTTTaGTCCAACCCTGGCTTTAAC +
Preference number: 5 (lower is better)
Translates to: SIKTISGVITLRTISGVIIGRFF*SNPGFN
Trigger: GTTAAAGCCAGGGTTGGACAAAAAGAATCTGCCTAT...TATCACTCCAGAAATTGTTCTGAGAGTGATCACTCCAGAAATGGTTTTGATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS-3UTR CAA 90 bp CAAGCCAAAAGTGAAAATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTACGGTTATGAGCTCTaGTCCTTCTGTTTTTATTTC +
Preference number: 5 (lower is better)
Translates to: QAKSENATHPLYAFMYTKYGYEL*SFCFYF
Trigger: GAAATAAAAACAGAAGGACAAGAGCTCATAACCGTA...CTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATTTTCACTTTTGGCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp CCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATATACGGTTATGAGCTCTaGTCCTTCTGTTTTTATTTC +
Preference number: 5 (lower is better)
Translates to: PHILFTLSCTLSHSIWLIYGYEL*SFCFYF
Trigger: GAAATAAAAACAGAAGGACAAGAGCTCATAACCGTA...TATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp CACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCATACGGTTATGAGCTCTaGTCCTTCTGTTTTTATTTC +
Preference number: 5 (lower is better)
Translates to: HILFTLSCTLSHSIWLIPYGYEL*SFCFYF
Trigger: GAAATAAAAACAGAAGGACAAGAGCTCATAACCGTA...TGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGCTTTGGAATCTTCTGTaGGTCTATAACCAATCAAGG +
Preference number: 5 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKLWNLL*VYNQSR
Trigger: CCTTGATTGGTTATAGACCAACAGAAGATTCCAAAG...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp CCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATAAGTCACTCCATTTGGTaGATACCAACTAAGATACAA +
Preference number: 5 (lower is better)
Translates to: PHILFTLSCTLSHSIWLISHSIW*IPTKIQ
Trigger: TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACT...TATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp AATGCCACACATCCTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTAGTCACTCCATTTGGTaGATACCAACTAAGATACAA +
Preference number: 5 (lower is better)
Translates to: NATHPLYAFMYTKSLHLVSHSIW*IPTKIQ
Trigger: TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACT...AACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAGGATGTGTGGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp AGCAGAAAACTGTCCAGGAAAATCAGACTTCAAAGTTGGTGCAACTTAGCTGATAGTCACTCCATTTGGTaGATACCAACTAAGATACAA +
Preference number: 5 (lower is better)
Translates to: SRKLSRKIRLQSWCNLADSHSIW*IPTKIQ
Trigger: TTGTATCTTAGTTGGTATCAACCAAATGGAGTGACT...ATCAGCTAAGTTGCACCAACTTTGAAGTCTGATTTTCCTGGACAGTTTTCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp CTCTTTACGCTTTCATGTACACTAAGTCACTCCATTTGGTTGATACCAACTAAGTACGGTTATGAGCTCTaGTCCTTCTGTTTTTATTTC +
Preference number: 5 (lower is better)
Translates to: LFTLSCTLSHSIWLIPTKYGYEL*SFCFYF
Trigger: GAAATAAAAACAGAAGGACAAGAGCTCATAACCGTA...CTTAGTTGGTATCAACCAAATGGAGTGACTTAGTGTACATGAAAGCGTAAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000367739.9
ENST00000642390.1
ENST00000643119.1
ENST00000644894.1
ENST00000645045.1
ENST00000645753.1
ENST00000646036.1
ENST00000646898.1
ENST00000647124.1
CDS-3UTR CAA 90 bp AGTCACCACTTCTGTTATACTAGAAAGTTCTTCTGTATGTTCCACTTTTCCTGGTACGGTTATGAGCTCTaGTCCTTCTGTTTTTATTTC +
Preference number: 5 (lower is better)
Translates to: SHHFCYTRKFFCMFHFSWYGYEL*SFCFYF
Trigger: GAAATAAAAACAGAAGGACAAGAGCTCATAACCGTA...CCAGGAAAAGTGGAACATACAGAAGAACTTTCTAGTATAACAGAAGTGGTGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643119.1
ENST00000645045.1
CDS CCA 72 bp GGGCGACCTCGGAGAAGCGGGGCGGGGCTTCCCGGCTaGGGCGGATCCCTCCCTCCCTCTCGTCCCGACCCG +
Preference number: 6 (lower is better)
Translates to: GRPRRSGAGLPG*GGSLPPSRPDP
Trigger: CGGGTCGGGACGAGAGGGAGGGAGGGATCCGCCCCAGCCGGGAAGCCCCGCCCCGCTTCTCCGAGGTCGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644894.1
CDS CCA 72 bp GAGAAAGAGGAGAGCCATGCTGCTACCGACGGTCGCTaGCTCCAACCCCGAGCGCCTGCGGGACCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: EKEESHAATDGR*LQPRAPAGPAQ
Trigger: CTGGGCTGGTCCCGCAGGCGCTCGGGGTTGGAGCCAGCGACCGTCGGTAGCAGCATGGCTCTCCTCTTTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367739.9
ENST00000414770.5
ENST00000458076.5
ENST00000478333.1
CDS TCA 72 bp AAAAGTGGATTACAAGAGTCGGAAAAACAAGCGGCGTaGTTTGTTGTGGCGGCAACCAGGGAAGAGGCAGGA +
Preference number: 6 (lower is better)
Translates to: KSGLQESEKQAA*FVVAATREEAG
Trigger: TCCTGCCTCTTCCCTGGTTGCCGCCACAACAAATCACGCCGCTTGTTTTTCCGACTCTTGTAATCCACTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644894.1
ENST00000646898.1
CDS TCA 72 bp TATATTATGGCCAAAGAGTCGGAAAAACAAGCGGCGTaGTTTGTTGTGGCGGCAACCAGGGAAGAGGCAGGA +
Preference number: 6 (lower is better)
Translates to: YIMAKESEKQAA*FVVAATREEAG
Trigger: TCCTGCCTCTTCCCTGGTTGCCGCCACAACAAATCACGCCGCTTGTTTTTCCGACTCTTTGGCCATAATATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646036.1
CDS CCA 72 bp ATGCGTCACTTAACGATGGAGATCCGTTCTGAGAAATaGAGAAATGTCCCCTTAGGCAATTTCTTCGGGCAG +
Preference number: 6 (lower is better)
Translates to: MRHLTMEIRSEK*RNVPLGNFFGQ
Trigger: CTGCCCGAAGAAATTGCCTAAGGGGACATTTCTCCATTTCTCAGAACGGATCTCCATCGTTAAGTGACGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644894.1
ENST00000646898.1
CDS TCA 72 bp GCAAGTCATGCGTCACTTAACGATGGAGATCCGTTCTaGGAAATGGAGAAATGTCCCCTTAGGCAATTTCTT +
Preference number: 6 (lower is better)
Translates to: ASHASLNDGDPF*EMEKCPLRQFL
Trigger: AAGAAATTGCCTAAGGGGACATTTCTCCATTTCTCAGAACGGATCTCCATCGTTAAGTGACGCATGACTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644894.1
CDS TCA 72 bp CCAAGTCATGCGTCACTTAACGATGGAGATCCGTTCTaGGAAATGGAGAAATGTCCCCTTAGGCAATTTCTT +
Preference number: 6 (lower is better)
Translates to: PSHASLNDGDPF*EMEKCPLRQFL
Trigger: AAGAAATTGCCTAAGGGGACATTTCTCCATTTCTCAGAACGGATCTCCATCGTTAAGTGACGCATGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646898.1
CDS CAA 90 bp AAGAGGCAAGAAATATTTGGCAAAGAATTTGCATCTTTAGTACTTTaGGACCTCTATAAGCAGTTTAGAATGTTTTGCCACGTGGGAAGG +
Preference number: 6 (lower is better)
Translates to: KRQEIFGKEFASLVL*DLYKQFRMFCHVGR
Trigger: CCTTCCCACGTGGCAAAACATTCTAAACTGCTTATAGAGGTCCAAAAGTACTAAAGATGCAAATTCTTTGCCAAATATTTCTTGCCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478333.1