Pregenerated sensors for IFNG (Homo sapiens)
Ensembl gene IDs: ENSG00000111537Ensembl transcript IDs: ENST00000229135.4
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCACAGTTGTCAACAATATTTGGAAGCACCAGGCATGAAATCTCCTaGGATGCTATGTTTTCATCAGGGTCACCTGACACATTCAAGTTC | + |
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Preference number: 1 (lower is better) Translates to: SQLSTIFGSTRHEIS*DAMFSSGSPDTFKF Trigger: GAACTTGAATGTGTCAGGTGACCCTGATGAAAACATAGCATCTCAGGAGATTTCATGCCTGGTGCTTCCAAATATTGTTGACAACTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| 3UTR TCA 90 bp | CTGGATAGTATCACTTCACTTATAAGTGTTCATTGTATCATCAAGTaGAATAAACACACAACCCATGGGATCTTGCTTAGGTTGGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: LDSITSLISVHCIIK*NKHTTHGILLRLAA Trigger: GGCAGCCAACCTAAGCAAGATCCCATGGGTTGTGTGTTTATTTCACTTGATGATACAATGAACACTTATAAGTGAAGTGATACTATCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| 3UTR-3UTR CCA 90 bp | TACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCGGATCTTGCTTAGGTTaGCTGCCTAGTTGGCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: YFPFGYSHSCQQYLEAPGGSCLG*LPSWPL Trigger: CAGGGGCCAACTAGGCAGCCAACCTAAGCAAGATCC...GCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| 3UTR-3UTR GCA 90 bp | TACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCCAACCCATGGGATCTTaGTTAGGTTGGCTGCCTAGT | + |
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Preference number: 2 (lower is better) Translates to: YFPFGYSHSCQQYLEAPGQPMGS*LGWLPS Trigger: ACTAGGCAGCCAACCTAAGCAAGATCCCATGGGTTG...GCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| 3UTR-3UTR GCA 90 bp | GGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCATGAAATCTCCTAGCACTGGCTCAGATTaGAGGCATATTTTCAAACCG | + |
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Preference number: 2 (lower is better) Translates to: GYSHSCQQYLEAPGMKSPSTGSD*RHIFKP Trigger: CGGTTTGAAAATATGCCTGCAATCTGAGCCAGTGCT...AGGAGATTTCATGCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| 3UTR-3UTR TCA 90 bp | GGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCATGAAATCTCCTCATTCAAGTTCTGTCTaGCATGCCATTAAAGCACTG | + |
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Preference number: 2 (lower is better) Translates to: GYSHSCQQYLEAPGMKSPHSSSV*HAIKAL Trigger: CAGTGCTTTAATGGCATGTCAGACAGAACTTGAATG...AGGAGATTTCATGCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| 3UTR-3UTR TCA 90 bp | TCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCATGAATTCATCAGGGTCACCTaGCACATTCAAGTTCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: SIWVQSQLSTIFGSTRHEFIRVT*HIQVLS Trigger: AGACAGAACTTGAATGTGTCAGGTGACCCTGATGAA...TTCATGCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| 3UTR CAA 90 bp | CACATTCAAGTTCTGTCTGACATGCCATTAAAGCACTGGCTCAGATaGCAGGCATATTTTCAAACCGGCAGTAACTGGATAGTATCACTT | + |
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Preference number: 2 (lower is better) Translates to: HIQVLSDMPLKHWLR*QAYFQTGSNWIVSL Trigger: AAGTGATACTATCCAGTTACTGCCGGTTTGAAAATATGCCTGCAATCTGAGCCAGTGCTTTAATGGCATGTCAGACAGAACTTGAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| 3UTR-3UTR CCA 90 bp | TACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCATGCCATTAAAGCACTaGCTCAGATTGCAGGCATAT | + |
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Preference number: 2 (lower is better) Translates to: YFPFGYSHSCQQYLEAPGMPLKH*LRLQAY Trigger: ATATGCCTGCAATCTGAGCCAGTGCTTTAATGGCAT...GCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| 3UTR CAA 90 bp | ATGAGTTACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTaGGAAGCACCAGGCATGAAATCTCCTGAGATGCTATGTTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: MSYFPFGYSHSCQQY*EAPGMKSPEMLCFH Trigger: ATGAAAACATAGCATCTCAGGAGATTTCATGCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTAACTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| 3UTR-3UTR CCA 90 bp | AGTTACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCACAAACCGGCAGTAACTaGATAGTATCACTTCACTTA | + |
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Preference number: 2 (lower is better) Translates to: SYFPFGYSHSCQQYLEAPQTGSN*IVSLHL Trigger: TAAGTGAAGTGATACTATCCAGTTACTGCCGGTTTG...TGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| 3UTR CCA 72 bp | CACATTCAAGTTCTGTCTGACATGCCATTAAAGCACTaGCTCAGATTGCAGGCATATTTTCAAACCGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: HIQVLSDMPLKH*LRLQAYFQTGS Trigger: ACTGCCGGTTTGAAAATATGCCTGCAATCTGAGCCAGTGCTTTAATGGCATGTCAGACAGAACTTGAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| 3UTR TCA 72 bp | AATCTCCTGAGATGCTATGTTTTCATCAGGGTCACCTaGCACATTCAAGTTCTGTCTGACATGCCATTAAAG | + |
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Preference number: 3 (lower is better) Translates to: NLLRCYVFIRVT*HIQVLSDMPLK Trigger: CTTTAATGGCATGTCAGACAGAACTTGAATGTGTCAGGTGACCCTGATGAAAACATAGCATCTCAGGAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR CCA 90 bp | GGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCATGAAATCTCCTCCCTGTTTTAGCTGCTaGCGACAGTTCAGCCATCAC | + |
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Preference number: 4 (lower is better) Translates to: GYSHSCQQYLEAPGMKSPPCFSC*RQFSHH Trigger: GTGATGGCTGAACTGTCGCCAGCAGCTAAAACAGGG...AGGAGATTTCATGCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR GCA 90 bp | GGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCATGAAATCTCCTCAACCCATGGGATCTTaGTTAGGTTGGCTGCCTAGT | + |
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Preference number: 4 (lower is better) Translates to: GYSHSCQQYLEAPGMKSPQPMGS*LGWLPS Trigger: ACTAGGCAGCCAACCTAAGCAAGATCCCATGGGTTG...AGGAGATTTCATGCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR TCA 90 bp | TACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCCCTCGAAACAGCATCTaGCTCCTTTTTCGCTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: YFPFGYSHSCQQYLEAPGPRNSI*LLFRFP Trigger: AGGGAAGCGAAAAAGGAGTCAGATGCTGTTTCGAGG...GCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR GCA 90 bp | TACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCCTTCCCTGTTTTAGCTaGTGGCGACAGTTCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: YFPFGYSHSCQQYLEAPGLPCFS*WRQFSH Trigger: ATGGCTGAACTGTCGCCAGCAGCTAAAACAGGGAAG...GCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR CCA 90 bp | TACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCCAGGACAACCATTACTaGGATGCTCTTCGACCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: YFPFGYSHSCQQYLEAPGQDNHY*DALRPR Trigger: TCGAGGTCGAAGAGCATCCCAGTAATGGTTGTCCTG...GCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR CCA 90 bp | AGTTACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGATCTTGCTTAGGTTaGCTGCCTAGTTGGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: SYFPFGYSHSCQQYLEAPGSCLG*LPSWPL Trigger: CAGGGGCCAACTAGGCAGCCAACCTAAGCAAGATCC...TGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR TCA 90 bp | GGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCATGAAATCTCCTTTCATCAGGGTCACCTaGCACATTCAAGTTCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GYSHSCQQYLEAPGMKSPFIRVT*HIQVLS Trigger: AGACAGAACTTGAATGTGTCAGGTGACCCTGATGAA...AGGAGATTTCATGCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR GCA 90 bp | TACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCCAACCATTACTGGGATaGTCTTCGACCTCGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: YFPFGYSHSCQQYLEAPGQPLLG*SSTSKQ Trigger: CTGTTTCGAGGTCGAAGAGCATCCCAGTAATGGTTG...GCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| 3UTR CAA 72 bp | GTTCTGTCTGACATGCCATTAAAGCACTGGCTCAGATaGCAGGCATATTTTCAAACCGGCAGTAACTGGATA | + |
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Preference number: 4 (lower is better) Translates to: VLSDMPLKHWLR*QAYFQTGSNWI Trigger: TATCCAGTTACTGCCGGTTTGAAAATATGCCTGCAATCTGAGCCAGTGCTTTAATGGCATGTCAGACAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR TCA 90 bp | GGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCATGAAATCTCCTCATTCATGTCTTCCTTaGTGGTCTCCACACTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: GYSHSCQQYLEAPGMKSPHSCLP*WSPHSF Trigger: AAAAGAGTGTGGAGACCATCAAGGAAGACATGAATG...AGGAGATTTCATGCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR GCA 90 bp | TACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCAGCACTGGCTCAGATTaGAGGCATATTTTCAAACCG | + |
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Preference number: 4 (lower is better) Translates to: YFPFGYSHSCQQYLEAPGSTGSD*RHIFKP Trigger: CGGTTTGAAAATATGCCTGCAATCTGAGCCAGTGCT...GCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR CCA 90 bp | TCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCATGAATGCTTCTTTTACATATaGGTCCTGGCAGTAACAGCC | + |
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Preference number: 4 (lower is better) Translates to: SIWVQSQLSTIFGSTRHECFFYI*VLAVTA Trigger: GGCTGTTACTGCCAGGACCCATATGTAAAAGAAGCA...TTCATGCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR TCA 90 bp | TCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCATGAAGTTCTTGTATCAAGCTaGTCAGGTCCAAAGGACTTA | + |
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Preference number: 4 (lower is better) Translates to: SIWVQSQLSTIFGSTRHEVLVSS*SGPKDL Trigger: TAAGTCCTTTGGACCTGATCAGCTTGATACAAGAAC...TTCATGCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR TCA 90 bp | TCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCATGAACATTCAAGTTCTGTCTaGCATGCCATTAAAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: SIWVQSQLSTIFGSTRHEHSSSV*HAIKAL Trigger: CAGTGCTTTAATGGCATGTCAGACAGAACTTGAATG...TTCATGCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR TCA 90 bp | AGTTACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCATGGAAGCACCAGGCATaGAATCTCCTGAGATGCTAT | + |
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Preference number: 4 (lower is better) Translates to: SYFPFGYSHSCQQYLEAPWKHQA*NLLRCY Trigger: ATAGCATCTCAGGAGATTTCATGCCTGGTGCTTCCA...TGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR TCA 90 bp | GGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCATGAAATCTCCTTCCAAAGGACTTAACTaGTCTTTCTCTTCTAATAGC | + |
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Preference number: 4 (lower is better) Translates to: GYSHSCQQYLEAPGMKSPSKGLN*SFSSNS Trigger: GCTATTAGAAGAGAAAGATCAGTTAAGTCCTTTGGA...AGGAGATTTCATGCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR CCA 90 bp | TACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCAGTTCAGCCATCACTTaGATGAGTTCATGTATTGCT | + |
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Preference number: 4 (lower is better) Translates to: YFPFGYSHSCQQYLEAPGSSAIT*MSSCIA Trigger: AGCAATACATGAACTCATCCAAGTGATGGCTGAACT...GCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR CCA 90 bp | TACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCCAAACCGGCAGTAACTaGATAGTATCACTTCACTTA | + |
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Preference number: 4 (lower is better) Translates to: YFPFGYSHSCQQYLEAPGQTGSN*IVSLHL Trigger: TAAGTGAAGTGATACTATCCAGTTACTGCCGGTTTG...GCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR TCA 90 bp | TACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCTCCGCTACATCTGAATaGCCTGCATTAAAATATTTC | + |
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Preference number: 4 (lower is better) Translates to: YFPFGYSHSCQQYLEAPGSATSE*PALKYF Trigger: GAAATATTTTAATGCAGGTCATTCAGATGTAGCGGA...GCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR GCA 90 bp | TCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCATGAAGATGAGTTCATGTATTaGTTTGCGTTGGACATTCAA | + |
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Preference number: 4 (lower is better) Translates to: SIWVQSQLSTIFGSTRHEDEFMY*FALDIQ Trigger: TTGAATGTCCAACGCAAAGCAATACATGAACTCATC...TTCATGCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR CCA 90 bp | AGTTACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGTCTCCACACTCTTTTaGATGCTCTGGTCATCTTTA | + |
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Preference number: 4 (lower is better) Translates to: SYFPFGYSHSCQQYLEAPVSTLF*MLWSSL Trigger: TAAAGATGACCAGAGCATCCAAAAGAGTGTGGAGAC...TGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR CCA 90 bp | AGTTACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAATGCCATTAAAGCACTaGCTCAGATTGCAGGCATAT | + |
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Preference number: 4 (lower is better) Translates to: SYFPFGYSHSCQQYLEAPMPLKH*LRLQAY Trigger: ATATGCCTGCAATCTGAGCCAGTGCTTTAATGGCAT...TGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR CCA 90 bp | AGTTACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCATGTATTGCTTTGCGTTaGACATTCAAGTCAGTTACC | + |
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Preference number: 4 (lower is better) Translates to: SYFPFGYSHSCQQYLEAPCIALR*TFKSVT Trigger: GGTAACTGACTTGAATGTCCAACGCAAAGCAATACA...TGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR TCA 90 bp | AGTTACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCATTCTCTTCTAATAGCTaGTCTTCAGATGATCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: SYFPFGYSHSCQQYLEAPFSSNS*SSDDQN Trigger: GTTCTGATCATCTGAAGATCAGCTATTAGAAGAGAA...TGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS TCA 90 bp | CAGGACAACCATTACTGGGATGCTCTTCGACCTCGAAACAGCATCTaGCTCCTTTTTCGCTTCCCTGTTTTAGCTGCTGGCGACAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: QDNHYWDALRPRNSI*LLFRFPVLAAGDSS Trigger: TGAACTGTCGCCAGCAGCTAAAACAGGGAAGCGAAAAAGGAGTCAGATGCTGTTTCGAGGTCGAAGAGCATCCCAGTAATGGTTGTCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS GCA 90 bp | ACCTCGAAACAGCATCTGACTCCTTTTTCGCTTCCCTGTTTTAGCTaGTGGCGACAGTTCAGCCATCACTTGGATGAGTTCATGTATTGC | + |
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Preference number: 5 (lower is better) Translates to: TSKQHLTPFSLPCFS*WRQFSHHLDEFMYC Trigger: GCAATACATGAACTCATCCAAGTGATGGCTGAACTGTCGCCAGCAGCTAAAACAGGGAAGCGAAAAAGGAGTCAGATGCTGTTTCGAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS CCA 90 bp | TTTCGCTTCCCTGTTTTAGCTGCTGGCGACAGTTCAGCCATCACTTaGATGAGTTCATGTATTGCTTTGCGTTGGACATTCAAGTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: FRFPVLAAGDSSAIT*MSSCIALRWTFKSV Trigger: AACTGACTTGAATGTCCAACGCAAAGCAATACATGAACTCATCCAAGTGATGGCTGAACTGTCGCCAGCAGCTAAAACAGGGAAGCGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS CCA 90 bp | TCGAAACAGCATCTGACTCCTTTTTCGCTTCCCTGTTTTAGCTGCTaGCGACAGTTCAGCCATCACTTGGATGAGTTCATGTATTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: SKQHLTPFSLPCFSC*RQFSHHLDEFMYCF Trigger: AAAGCAATACATGAACTCATCCAAGTGATGGCTGAACTGTCGCCAGCAGCTAAAACAGGGAAGCGAAAAAGGAGTCAGATGCTGTTTCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS GCA 90 bp | AGCTGCTGGCGACAGTTCAGCCATCACTTGGATGAGTTCATGTATTaGTTTGCGTTGGACATTCAAGTCAGTTACCGAATAATTAGTCAG | + |
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Preference number: 5 (lower is better) Translates to: SCWRQFSHHLDEFMY*FALDIQVSYRIISQ Trigger: CTGACTAATTATTCGGTAACTGACTTGAATGTCCAACGCAAAGCAATACATGAACTCATCCAAGTGATGGCTGAACTGTCGCCAGCAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR CAA 90 bp | TACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCGGTCTCCACACTCTTTaGGATGCTCTGGTCATCTTT | + |
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Preference number: 5 (lower is better) Translates to: YFPFGYSHSCQQYLEAPGGLHTL*DALVIF Trigger: AAAGATGACCAGAGCATCCAAAAGAGTGTGGAGACC...GCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR CAA 90 bp | TACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCCAGTTCAGCCATCACTaGGATGAGTTCATGTATTGC | + |
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Preference number: 5 (lower is better) Translates to: YFPFGYSHSCQQYLEAPGQFSHH*DEFMYC Trigger: GCAATACATGAACTCATCCAAGTGATGGCTGAACTG...GCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR CAA 90 bp | TCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCATGAATGGGTACAGTCACAGTaGTCAACAATATTTGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: SIWVQSQLSTIFGSTRHEWVQSQ*STIFGS Trigger: GCTTCCAAATATTGTTGACAACTGTGACTGTACCCA...TTCATGCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR CAA 90 bp | TACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAGGCAGTTGTCAACAATATTaGGAAGCACCAGGCATGAAA | + |
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Preference number: 5 (lower is better) Translates to: YFPFGYSHSCQQYLEAPGSCQQY*EAPGMK Trigger: TTTCATGCCTGGTGCTTCCAAATATTGTTGACAACT...GCCTGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR CAA 90 bp | AGTTACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAACATTCATGTCTTCCTaGATGGTCTCCACACTCTTT | + |
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Preference number: 5 (lower is better) Translates to: SYFPFGYSHSCQQYLEAPTFMSS*MVSTLF Trigger: AAAGAGTGTGGAGACCATCAAGGAAGACATGAATGT...TGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS-3UTR CAA 90 bp | AGTTACTTTCCATTTGGGTACAGTCACAGTTGTCAACAATATTTGGAAGCACCAATGTATTGCTTTGCGTaGGACATTCAAGTCAGTTAC | + |
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Preference number: 5 (lower is better) Translates to: SYFPFGYSHSCQQYLEAPMYCFA*DIQVSY Trigger: GTAACTGACTTGAATGTCCAACGCAAAGCAATACAT...TGGTGCTTCCAAATATTGTTGACAACTGTGACTGTACCCAAATGGAAAGTAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS TCA 72 bp | CATTACTGGGATGCTCTTCGACCTCGAAACAGCATCTaGCTCCTTTTTCGCTTCCCTGTTTTAGCTGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: HYWDALRPRNSI*LLFRFPVLAAG Trigger: GCCAGCAGCTAAAACAGGGAAGCGAAAAAGGAGTCAGATGCTGTTTCGAGGTCGAAGAGCATCCCAGTAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS GCA 72 bp | CAGCATCTGACTCCTTTTTCGCTTCCCTGTTTTAGCTaGTGGCGACAGTTCAGCCATCACTTGGATGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: QHLTPFSLPCFS*WRQFSHHLDEF Trigger: GAACTCATCCAAGTGATGGCTGAACTGTCGCCAGCAGCTAAAACAGGGAAGCGAAAAAGGAGTCAGATGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS CCA 72 bp | CATCTGACTCCTTTTTCGCTTCCCTGTTTTAGCTGCTaGCGACAGTTCAGCCATCACTTGGATGAGTTCATG | + |
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Preference number: 6 (lower is better) Translates to: HLTPFSLPCFSC*RQFSHHLDEFM Trigger: CATGAACTCATCCAAGTGATGGCTGAACTGTCGCCAGCAGCTAAAACAGGGAAGCGAAAAAGGAGTCAGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS CCA 72 bp | CCTGTTTTAGCTGCTGGCGACAGTTCAGCCATCACTTaGATGAGTTCATGTATTGCTTTGCGTTGGACATTC | + |
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Preference number: 6 (lower is better) Translates to: PVLAAGDSSAIT*MSSCIALRWTF Trigger: GAATGTCCAACGCAAAGCAATACATGAACTCATCCAAGTGATGGCTGAACTGTCGCCAGCAGCTAAAACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS CAA 72 bp | CCCTGTTTTAGCTGCTGGCGACAGTTCAGCCATCACTaGGATGAGTTCATGTATTGCTTTGCGTTGGACATT | + |
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Preference number: 6 (lower is better) Translates to: PCFSCWRQFSHH*DEFMYCFALDI Trigger: AATGTCCAACGCAAAGCAATACATGAACTCATCCAAGTGATGGCTGAACTGTCGCCAGCAGCTAAAACAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS CAA 90 bp | TTTTCGCTTCCCTGTTTTAGCTGCTGGCGACAGTTCAGCCATCACTaGGATGAGTTCATGTATTGCTTTGCGTTGGACATTCAAGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: FSLPCFSCWRQFSHH*DEFMYCFALDIQVS Trigger: ACTGACTTGAATGTCCAACGCAAAGCAATACATGAACTCATCCAAGTGATGGCTGAACTGTCGCCAGCAGCTAAAACAGGGAAGCGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS GCA 72 bp | ATTCAAATATTGCAGGCAGGACAACCATTACTGGGATaGTCTTCGACCTCGAAACAGCATCTGACTCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: IQILQAGQPLLG*SSTSKQHLTPF Trigger: AAAAGGAGTCAGATGCTGTTTCGAGGTCGAAGAGCATCCCAGTAATGGTTGTCCTGCCTGCAATATTTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS GCA 72 bp | CGACAGTTCAGCCATCACTTGGATGAGTTCATGTATTaGTTTGCGTTGGACATTCAAGTCAGTTACCGAATA | + |
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Preference number: 6 (lower is better) Translates to: RQFSHHLDEFMY*FALDIQVSYRI Trigger: TATTCGGTAACTGACTTGAATGTCCAACGCAAAGCAATACATGAACTCATCCAAGTGATGGCTGAACTGTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS CAA 72 bp | AGCCATCACTTGGATGAGTTCATGTATTGCTTTGCGTaGGACATTCAAGTCAGTTACCGAATAATTAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: SHHLDEFMYCFA*DIQVSYRIISQ Trigger: CTGACTAATTATTCGGTAACTGACTTGAATGTCCAACGCAAAGCAATACATGAACTCATCCAAGTGATGGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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| CDS TCA 72 bp | CCAAAGAAGTTGAAATCAGTAGTTCTTGTATCAAGCTaGTCAGGTCCAAAGGACTTAACTGATCTTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: PKKLKSVVLVSS*SGPKDLTDLSL Trigger: AAGAGAAAGATCAGTTAAGTCCTTTGGACCTGATCAGCTTGATACAAGAACTACTGATTTCAACTTCTTTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229135.4 |
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