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Pregenerated sensors for IFNE (Homo sapiens)

Ensembl gene IDs: ENSG00000184995

Ensembl transcript IDs: ENST00000448696.4

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp AGTCCCTCCACCTACCTCGGGCTTCTAAACTCTGTAGTAAGCTCTTaGTTCATGTCGTTCAAGGGTCTTCCTTGTTTGCTCAGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: SPSTYLGLLNSVVSS*FMSFKGLPCLLSFS
Trigger: AGAAAAACTGAGCAAACAAGGAAGACCCTTGAACGACATGAAGCAAGAGCTTACTACAGAGTTTAGAAGCCCGAGGTAGGTGGAGGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448696.4
CDS GCA 90 bp CACAGTTCCAAAGAAGTGCTTGATAATCATGGTGAAGGTCAAATATaGTACTTATCCCTGCATAGACTTAGGGAAATTCCAGCTCTAGTG +
Preference number: 5 (lower is better)
Translates to: HSSKEVLDNHGEGQI*YLSLHRLREIPALV
Trigger: CACTAGAGCTGGAATTTCCCTAAGTCTATGCAGGGATAAGTAGCATATTTGACCTTCACCATGATTATCAAGCACTTCTTTGGAACTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448696.4
CDS GCA 72 bp ACCTACCTCGGGCTTCTAAACTCTGTAGTAAGCTCTTaGTTCATGTCGTTCAAGGGTCTTCCTTGTTTGCTC +
Preference number: 6 (lower is better)
Translates to: TYLGLLNSVVSS*FMSFKGLPCLL
Trigger: GAGCAAACAAGGAAGACCCTTGAACGACATGAAGCAAGAGCTTACTACAGAGTTTAGAAGCCCGAGGTAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448696.4
CDS CAA 90 bp ATAGTGGTAGAGGCCAGCAGCACCAACACAGTTCCAAAGAAGTGCTaGATAATCATGGTGAAGGTCAAATATGCTACTTATCCCTGCATA +
Preference number: 6 (lower is better)
Translates to: IVVEASSTNTVPKKC*IIMVKVKYATYPCI
Trigger: TATGCAGGGATAAGTAGCATATTTGACCTTCACCATGATTATCAAGCACTTCTTTGGAACTGTGTTGGTGCTGCTGGCCTCTACCACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448696.4
CDS CAA 90 bp TCTGTAGTAAGCTCTTGCTTCATGTCGTTCAAGGGTCTTCCTTGTTaGCTCAGTTTTTCTGTGAGACTGAACACAAAGAACAGACATCGG +
Preference number: 6 (lower is better)
Translates to: SVVSSCFMSFKGLPC*LSFSVRLNTKNRHR
Trigger: CCGATGTCTGTTCTTTGTGTTCAGTCTCACAGAAAAACTGAGCAAACAAGGAAGACCCTTGAACGACATGAAGCAAGAGCTTACTACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448696.4
CDS CAA 72 bp GAGGCCAGCAGCACCAACACAGTTCCAAAGAAGTGCTaGATAATCATGGTGAAGGTCAAATATGCTACTTAT +
Preference number: 6 (lower is better)
Translates to: EASSTNTVPKKC*IIMVKVKYATY
Trigger: ATAAGTAGCATATTTGACCTTCACCATGATTATCAAGCACTTCTTTGGAACTGTGTTGGTGCTGCTGGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448696.4
CDS CAA 72 bp AGCTCTTGCTTCATGTCGTTCAAGGGTCTTCCTTGTTaGCTCAGTTTTTCTGTGAGACTGAACACAAAGAAC +
Preference number: 6 (lower is better)
Translates to: SSCFMSFKGLPC*LSFSVRLNTKN
Trigger: GTTCTTTGTGTTCAGTCTCACAGAAAAACTGAGCAAACAAGGAAGACCCTTGAACGACATGAAGCAAGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448696.4
CDS TCA 72 bp GGAAGCAGAAAGTTTTTCCTGTGTGGTAGACACTGCTaGATTGACAAGGTTTGCAACTTATTCAAGAGTTTT +
Preference number: 6 (lower is better)
Translates to: GSRKFFLCGRHC*IDKVCNLFKSF
Trigger: AAAACTCTTGAATAAGTTGCAAACCTTGTCAATTCAGCAGTGTCTACCACACAGGAAAAACTTTCTGCTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448696.4
CDS GCA 72 bp CATAGACTTAGGGAAATTCCAGCTCTAGTGAATGTTTaGCTTTCATGCATCTCAGATTATTTTGGAGAGTGT +
Preference number: 6 (lower is better)
Translates to: HRLREIPALVNV*LSCISDYFGEC
Trigger: ACACTCTCCAAAATAATCTGAGATGCATGAAAGGCAAACATTCACTAGAGCTGGAATTTCCCTAAGTCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448696.4
CDS GCA 72 bp AAAGAAGTGCTTGATAATCATGGTGAAGGTCAAATATaGTACTTATCCCTGCATAGACTTAGGGAAATTCCA +
Preference number: 6 (lower is better)
Translates to: KEVLDNHGEGQI*YLSLHRLREIP
Trigger: TGGAATTTCCCTAAGTCTATGCAGGGATAAGTAGCATATTTGACCTTCACCATGATTATCAAGCACTTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448696.4
CDS CAA 72 bp GCAGAAAGTTTTTCCTGTGTGGTAGACACTGCTGAATaGACAAGGTTTGCAACTTATTCAAGAGTTTTAAAC +
Preference number: 6 (lower is better)
Translates to: AESFSCVVDTAE*TRFATYSRVLN
Trigger: GTTTAAAACTCTTGAATAAGTTGCAAACCTTGTCAATTCAGCAGTGTCTACCACACAGGAAAAACTTTCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448696.4
CDS CAA 90 bp TCTGAGGAAGCAGAAAGTTTTTCCTGTGTGGTAGACACTGCTGAATaGACAAGGTTTGCAACTTATTCAAGAGTTTTAAACTTTCTTGAT +
Preference number: 6 (lower is better)
Translates to: SEEAESFSCVVDTAE*TRFATYSRVLNFLD
Trigger: ATCAAGAAAGTTTAAAACTCTTGAATAAGTTGCAAACCTTGTCAATTCAGCAGTGTCTACCACACAGGAAAAACTTTCTGCTTCCTCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448696.4