Pregenerated sensors for IFITM5 (Homo sapiens)
Ensembl gene IDs: ENSG00000206013Ensembl transcript IDs: ENST00000382614.2
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GAGTTAGGGCCCGGGAACTCTCGGGTTAGGGTGAAGACCCCGGGGTCTGACTGGGCCCCAGGATCAGGATaGGGCAGGGATGGAGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: ELGPGNSRVRVKTPGSDWAPGSG*GRDGGP Trigger: GGGGCCTCCATCCCTGCCCCATCCTGATCCTGGGGC...CCAGTCAGACCCCGGGGTCTTCACCCTAACCCGAGAGTTCCCGGGCCCTAACTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS-3UTR CCA 90 bp | GGGGCAGGATCGGGGGCAGAGTTAGGGCCCGGGAACTCTCGGGTTAGGGTGAAGGCCCCAGGATCAGGATaGGGCAGGGATGGAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GAGSGAELGPGNSRVRVKAPGSG*GRDGGP Trigger: GGGGCCTCCATCCCTGCCCCATCCTGATCCTGGGGC...CTTCACCCTAACCCGAGAGTTCCCGGGCCCTAACTCTGCCCCCGATCCTGCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS-3UTR CCA 90 bp | GAGTTAGGGCCCGGGAACTCTCGGGTTAGGGTGAAGACCCCGGGGTCTGACTGGAGGCGGCAGAGTCCTTaGCCAGCCGGGCCAGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: ELGPGNSRVRVKTPGSDWRRQSP*PAGPGA Trigger: TGCACCTGGCCCGGCTGGCCAAGGACTCTGCCGCCT...CCAGTCAGACCCCGGGGTCTTCACCCTAACCCGAGAGTTCCCGGGCCCTAACTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS-3UTR TCA 90 bp | GGGGCAGGATCGGGGGCAGAGTTAGGGCCCGGGAACTCTCGGGTTAGGGTGAAGTCTGATCTCGGGCCTTaGTGGAGTAGGCCAGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: GAGSGAELGPGNSRVRVKSDLGP*WSRPAP Trigger: TGGCGCTGGCCTACTCCATCAAGGCCCGAGATCAGA...CTTCACCCTAACCCGAGAGTTCCCGGGCCCTAACTCTGCCCCCGATCCTGCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS-3UTR CCA 90 bp | CCCGGGAACTCTCGGGTTAGGGTGAAGACCCCGGGGTCTGACTGGTTCAGCCTTCCCCAGGAGCAGCAGTaGCGGCACCAGCGTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: PGNSRVRVKTPGSDWFSLPQEQQ*RHQRPH Trigger: ATGTGGACGCTGGTGCCGCCACTGCTGCTCCTGGGG...AAGGCTGAACCAGTCAGACCCCGGGGTCTTCACCCTAACCCGAGAGTTCCCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS-3UTR CCA 90 bp | GAGTTAGGGCCCGGGAACTCTCGGGTTAGGGTGAAGACCCCGGGGTCTGACTGGACCCCGGGGTCTGACTaGTTCAGCCTTAGGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELGPGNSRVRVKTPGSDWTPGSD*FSLRCP Trigger: TGGGCACCTAAGGCTGAACCAGTCAGACCCCGGGGT...CCAGTCAGACCCCGGGGTCTTCACCCTAACCCGAGAGTTCCCGGGCCCTAACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS-3UTR TCA 90 bp | GGGGCAGGATCGGGGGCAGAGTTAGGGCCCGGGAACTCTCGGGTTAGGGTGAAGTCACCAACCACCTTCTaGTCTCGGGCCTTGATGGAG | + |
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Preference number: 4 (lower is better) Translates to: GAGSGAELGPGNSRVRVKSPTTF*SRALME Trigger: CTCCATCAAGGCCCGAGATCAGAAGGTGGTTGGTGA...CTTCACCCTAACCCGAGAGTTCCCGGGCCCTAACTCTGCCCCCGATCCTGCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS-3UTR TCA 90 bp | CCCGGGAACTCTCGGGTTAGGGTGAAGACCCCGGGGTCTGACTGGTTCAGCCTTACTCTCGGGTTAGGGTaGAGACCCCGGGGTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PGNSRVRVKTPGSDWFSLTLGLG*RPRGLT Trigger: AGTCAGACCCCGGGGTCTTCACCCTAACCCGAGAGT...AAGGCTGAACCAGTCAGACCCCGGGGTCTTCACCCTAACCCGAGAGTTCCCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS-3UTR GCA 90 bp | GCAGAGTTAGGGCCCGGGAACTCTCGGGTTAGGGTGAAGACCCCGGGGTCTGACTGGTTCAGCCTTAGGTaGCCATGTTGGGGCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: AELGPGNSRVRVKTPGSDWFSLR*PCWGWR Trigger: CCTCCAGCCCCAACATGGGCACCTAAGGCTGAACCA...GTCAGACCCCGGGGTCTTCACCCTAACCCGAGAGTTCCCGGGCCCTAACTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS-3UTR CCA 90 bp | GAGTTAGGGCCCGGGAACTCTCGGGTTAGGGTGAAGACCCCGGGGTCTGACTGGGATACGCCGTGTCCATaGGTTCCAGCGCCGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ELGPGNSRVRVKTPGSDWDTPCP*VPAPSL Trigger: AAGAGACGGCGCTGGAACCCATGGACACGGCGTATC...CCAGTCAGACCCCGGGGTCTTCACCCTAACCCGAGAGTTCCCGGGCCCTAACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS-3UTR TCA 90 bp | GGGGCAGGATCGGGGGCAGAGTTAGGGCCCGGGAACTCTCGGGTTAGGGTGAAGTCAGGTAGAGGGTGCTaGACACCGACCAGATCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GAGSGAELGPGNSRVRVKSGRGC*TPTRSS Trigger: ACTTGATCTGGTCGGTGTTCAGCACCCTCTACCTGA...CTTCACCCTAACCCGAGAGTTCCCGGGCCCTAACTCTGCCCCCGATCCTGCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS-3UTR TCA 90 bp | GGGGCAGGATCGGGGGCAGAGTTAGGGCCCGGGAACTCTCGGGTTAGGGTGAAGCATCAAACTTGGTGCTaGAGAAGGCGGCAGAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: GAGSGAELGPGNSRVRVKHQTWC*RRRQSP Trigger: AGGACTCTGCCGCCTTCTTCAGCACCAAGTTTGATG...CTTCACCCTAACCCGAGAGTTCCCGGGCCCTAACTCTGCCCCCGATCCTGCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS-3UTR CCA 90 bp | CCCGGGAACTCTCGGGTTAGGGTGAAGACCCCGGGGTCTGACTGGTTCAGCCTTTGTAGCACTTGGCTTTaGAGCCAAAACGCCGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: PGNSRVRVKTPGSDWFSLCSTWL*SQNAGP Trigger: CGGCCCGGCGTTTTGGCTCCAAAGCCAAGTGCTACA...AAGGCTGAACCAGTCAGACCCCGGGGTCTTCACCCTAACCCGAGAGTTCCCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS-3UTR CCA 90 bp | GCAGAGTTAGGGCCCGGGAACTCTCGGGTTAGGGTGAAGACCCCGGGGTCTGACGGATGTTGTAGCACTTaGCTTTGGAGCCAAAACGCC | + |
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Preference number: 4 (lower is better) Translates to: AELGPGNSRVRVKTPGSDGCCST*LWSQNA Trigger: GGCGTTTTGGCTCCAAAGCCAAGTGCTACAACATCC...GTCAGACCCCGGGGTCTTCACCCTAACCCGAGAGTTCCCGGGCCCTAACTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS-3UTR CAA 90 bp | GGGGCAGGATCGGGGGCAGAGTTAGGGCCCGGGAACTCTCGGGTTAGGGTGAAGAAGGCGGCAGAGTCCTaGGCCAGCCGGGCCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GAGSGAELGPGNSRVRVKKAAES*ASRARC Trigger: GCACCTGGCCCGGCTGGCCAAGGACTCTGCCGCCTT...CTTCACCCTAACCCGAGAGTTCCCGGGCCCTAACTCTGCCCCCGATCCTGCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS CCA 90 bp | GGCCAGGTGCAGGGCACCAGTCACCACCAGCCCCAGGAGCAGCAGTaGCGGCACCAGCGTCCACATCGCGGCCAGGATGTTGTAGCACTT | + |
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Preference number: 5 (lower is better) Translates to: GQVQGTSHHQPQEQQ*RHQRPHRGQDVVAL Trigger: AAGTGCTACAACATCCTGGCCGCGATGTGGACGCTGGTGCCGCCACTGCTGCTCCTGGGGCTGGTGGTGACTGGTGCCCTGCACCTGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS TCA 90 bp | AGGACCCAGCCTGTCAGTCATAGTCCGCGTCATCAAACTTGGTGCTaGAGAAGGCGGCAGAGTCCTTGGCCAGCCGGGCCAGGTGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: RTQPVSHSPRHQTWC*RRRQSPWPAGPGAG Trigger: CCCTGCACCTGGCCCGGCTGGCCAAGGACTCTGCCGCCTTCTTCAGCACCAAGTTTGATGACGCGGACTATGACTGACAGGCTGGGTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS-3UTR CAA 90 bp | GAGTTAGGGCCCGGGAACTCTCGGGTTAGGGTGAAGACCCCGGGGTCTGACTGGTCCGCGTCATCAAACTaGGTGCTGAAGAAGGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ELGPGNSRVRVKTPGSDWSASSN*VLKKAA Trigger: TGCCGCCTTCTTCAGCACCAAGTTTGATGACGCGGA...CCAGTCAGACCCCGGGGTCTTCACCCTAACCCGAGAGTTCCCGGGCCCTAACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS CCA 72 bp | GGGCCCGGGTGTCCTCGCGGGGATACGCCGTGTCCATaGGTTCCAGCGCCGTCTCTTCCACACTCAGACTGG | + |
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Preference number: 6 (lower is better) Translates to: GPGCPRGDTPCP*VPAPSLPHSDW Trigger: CCAGTCTGAGTGTGGAAGAGACGGCGCTGGAACCCATGGACACGGCGTATCCCCGCGAGGACACCCGGGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS CCA 72 bp | CCAGCGTCCACATCGCGGCCAGGATGTTGTAGCACTTaGCTTTGGAGCCAAAACGCCGGGCCGCTTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: PASTSRPGCCST*LWSQNAGPLPG Trigger: ACCTGGAAGCGGCCCGGCGTTTTGGCTCCAAAGCCAAGTGCTACAACATCCTGGCCGCGATGTGGACGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS CAA 72 bp | TCATCAAACTTGGTGCTGAAGAAGGCGGCAGAGTCCTaGGCCAGCCGGGCCAGGTGCAGGGCACCAGTCACC | + |
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Preference number: 6 (lower is better) Translates to: SSNLVLKKAAES*ASRARCRAPVT Trigger: GGTGACTGGTGCCCTGCACCTGGCCCGGCTGGCCAAGGACTCTGCCGCCTTCTTCAGCACCAAGTTTGATGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS TCA 72 bp | GGAAGCCGAGGCAACACAGATTCAGGTAGAGGGTGCTaGACACCGACCAGATCAAGTGGTCTCGAGGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: GSRGNTDSGRGC*TPTRSSGLEAG Trigger: CCCCGCCTCGAGACCACTTGATCTGGTCGGTGTTCAGCACCCTCTACCTGAATCTGTGTTGCCTCGGCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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| CDS TCA 72 bp | CCTGTCAGTCATAGTCCGCGTCATCAAACTTGGTGCTaGAGAAGGCGGCAGAGTCCTTGGCCAGCCGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PVSHSPRHQTWC*RRRQSPWPAGP Trigger: TGGCCCGGCTGGCCAAGGACTCTGCCGCCTTCTTCAGCACCAAGTTTGATGACGCGGACTATGACTGACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382614.2 |
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