RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IFITM10 (Homo sapiens)

Ensembl gene IDs: ENSG00000244242

Ensembl transcript IDs: ENST00000340134.5, ENST00000382123.1, ENST00000482459.1, ENST00000486852.1, ENST00000630256.1

Found 690 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTTGCAGGCAGGGGGCGCGCCGGCAGCCCGCACGCTGTCGGTCTTaGTGCTCTTGGACTCCATGGGGAACAGTGTGGGCGCCATCGGGG +
Preference number: 1 (lower is better)
Translates to: ACRQGARRQPARCRS*CSWTPWGTVWAPSG
Trigger: CCCCGATGGCGCCCACACTGTTCCCCATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGCGGGCTGCCGGCGCGCCCCCTGCCTGCAAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR TCA 90 bp TCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAGGCTCAATaGCAGCTCCGTGCAGCCCCGCATCAGCCTCGCAGCCCGCCGCCT +
Preference number: 1 (lower is better)
Translates to: SAAPGTSPTILQEAQ*QLRAAPHQPRSPPP
Trigger: AGGCGGCGGGCTGCGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR GCA 90 bp TCGATGACGGTCGTGGGGTTGGTCATCGTCTTCTTCTCGGCTAGGTaGTTGCAGGCAGGGGGCGCGCCGGCAGCCCGCACGCTGTCGGTC +
Preference number: 1 (lower is better)
Translates to: SMTVVGLVIVFFSAR*LQAGGAPAARTLSV
Trigger: GACCGACAGCGTGCGGGCTGCCGGCGCGCCCCCTGCCTGCAAGCACCTAGCCGAGAAGAAGACGATGACCAACCCCACGACCGTCATCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR TCA 90 bp AAGCCAGAGACCAGCGCCGGAGCTGATGCCTGCTTGCCTGCCTGCTaGGGGCGAGAATGCACCTGCTGTGGGGGCCTGACCTCACCGTGG +
Preference number: 1 (lower is better)
Translates to: KPETSAGADACLPAC*GRECTCCGGLTSPW
Trigger: CCACGGTGAGGTCAGGCCCCCACAGCAGGTGCATTCTCGCCCTCAGCAGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGTCTCTGGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR TCA 90 bp TCCGGGCTTCTCCCCCACCTTACCTTCCAAACCAGTCAACCCCACTaGCTGCACAGCTGCCACGCAGGCGCCCTGCTGTCCAGCCCTCTG +
Preference number: 1 (lower is better)
Translates to: SGLLPHLTFQTSQPH*LHSCHAGALLSSPL
Trigger: CAGAGGGCTGGACAGCAGGGCGCCTGCGTGGCAGCTGTGCAGTCAGTGGGGTTGACTGGTTTGGAAGGTAAGGTGGGGGAGAAGCCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR GCA 90 bp GGCTTCTCCCCCACCTTACCTTCCAAACCAGTCAACCCCACTGACTaGACAGCTGCCACGCAGGCGCCCTGCTGTCCAGCCCTCTGCTGC +
Preference number: 1 (lower is better)
Translates to: GFSPTLPSKPVNPTD*TAATQAPCCPALCC
Trigger: GCAGCAGAGGGCTGGACAGCAGGGCGCCTGCGTGGCAGCTGTGCAGTCAGTGGGGTTGACTGGTTTGGAAGGTAAGGTGGGGGAGAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CCA 90 bp CCCATCCCTGCATCCTGCCTCCCACATTGTGGACTGCACATGCCATaGGCCGTCAGGGCGCTGGCCTCGGCCTTTGAAAGGCATCTTCCG +
Preference number: 1 (lower is better)
Translates to: PIPASCLPHCGLHMP*AVRALASAFERHLP
Trigger: CGGAAGATGCCTTTCAAAGGCCGAGGCCAGCGCCCTGACGGCCCATGGCATGTGCAGTCCACAATGTGGGAGGCAGGATGCAGGGATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR TCA 90 bp TTGCCTGCCTTCCCACGGAATAGCAAGTCCTTCCCACTGCGCACCTaGGCTGCGGGATTTCCTGCGGTTTCCCAGACCAGCTGGGCACCC +
Preference number: 1 (lower is better)
Translates to: LPAFPRNSKSFPLRT*AAGFPAVSQTSWAP
Trigger: GGGTGCCCAGCTGGTCTGGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGCTATTCCGTGGGAAGGCAGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CCA 90 bp CACAACCAGGCTGCCCACAGTCTCGGCAAGGCTTTCAGCCGCCCCTaGCACTTCTCCCACCATCCTCCAAGAGGCTCAATGACAGCTCCG +
Preference number: 1 (lower is better)
Translates to: HNQAAHSLGKAFSRP*HFSHHPPRGSMTAP
Trigger: CGGAGCTGTCATTGAGCCTCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACTGTGGGCAGCCTGGTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR TCA 90 bp CCCCTGCGTTTGTCCCATCTGCTGCTAGCTCAAGGTCCTCCCTTCTaGGGCACCCCACGTCTCCAGCCCAGAAGGCTCTTCCCTTCTCTG +
Preference number: 1 (lower is better)
Translates to: PLRLSHLLLAQGPPF*GTPRLQPRRLFPSL
Trigger: CAGAGAAGGGAAGAGCCTTCTGGGCTGGAGACGTGGGGTGCCTCAGAAGGGAGGACCTTGAGCTAGCAGCAGATGGGACAAACGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR GCA 90 bp GAACTAGAAGCCAGGACCCTCTCTCTTCCAAGGCCCAGCAGCCTCTaGCATCCTCTTCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTC +
Preference number: 1 (lower is better)
Translates to: ELEARTLSLPRPSSL*HPLPAQACPGSLWV
Trigger: GACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGAAGAGGATGGCAGAGGCTGCTGGGCCTTGGAAGAGAGAGGGTCCTGGCTTCTAGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR GCA 90 bp GGGAAGGTTTGCCTGCCTTCCCACGGAATAGCAAGTCCTTCCCACTaGGCACCTGAGCTGCGGGATTTCCTGCGGTTTCCCAGACCAGCT +
Preference number: 1 (lower is better)
Translates to: GKVCLPSHGIASPSH*APELRDFLRFPRPA
Trigger: AGCTGGTCTGGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGCTATTCCGTGGGAAGGCAGGCAAACCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CCA 90 bp CTTCTTCTCCCTGGTTTCCTGCCCTTGGTACACAGCCCTCTCCACTaGGCTGTCCAAGTCAAGGGACAGGAATCCTCCGGGCTTCTCCCC +
Preference number: 1 (lower is better)
Translates to: LLLPGFLPLVHSPLH*AVQVKGQESSGLLP
Trigger: GGGGAGAAGCCCGGAGGATTCCTGTCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAAACCAGGGAGAAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CCA 90 bp GAGAATAAACATGTCTCAGTGCTTGTCTCCGCCAGCAGCCGTGCCTaGCGGGCCTTAGTAGTCGGTGAGGGGGTACCGCAGGAAGATGAA +
Preference number: 1 (lower is better)
Translates to: ENKHVSVLVSASSRA*RALVVGEGVPQEDE
Trigger: TTCATCTTCCTGCGGTACCCCCTCACCGACTACTAAGGCCCGCCAGGCACGGCTGCTGGCGGAGACAAGCACTGAGACATGTTTATTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR TCA 90 bp ACAGGTAATAGTCGTTCACCTCGGTGGTGTCCGGGTAGACCTCGATaGCGGTCGTGGGGTTGGTCATCGTCTTCTTCTCGGCTAGGTGCT +
Preference number: 1 (lower is better)
Translates to: TGNSRSPRWCPGRPR*RSWGWSSSSSRLGA
Trigger: AGCACCTAGCCGAGAAGAAGACGATGACCAACCCCACGACCGTCATCGAGGTCTACCCGGACACCACCGAGGTGAACGACTATTACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR GCA 90 bp GGCTGCCAGGGCAGAACTGGTGATGTTGAACAGCCGGGCCGTCTTTaGATCCTCCACGGCTCCATTCAGGTCATTGAGAAGCTTCTTGTC +
Preference number: 1 (lower is better)
Translates to: GCQGRTGDVEQPGRL*ILHGSIQVIEKLLV
Trigger: GACAAGAAGCTTCTCAATGACCTGAATGGAGCCGTGGAGGATGCAAAGACGGCCCGGCTGTTCAACATCACCAGTTCTGCCCTGGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR CCA 90 bp AGACTTCTCCAGGCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTaGAGCTGCATGGGTATTTCATTGAAAGTTCACAGACACAAGGGC +
Preference number: 1 (lower is better)
Translates to: RLLQALPGTQSRRLG*SCMGISLKVHRHKG
Trigger: GCCCTTGTGTCTGTGAACTTTCAATGAAATACCCATGCAGCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR TCA 90 bp TGGACTGCACATGCCATGGGCCGTCAGGGCGCTGGCCTCGGCCTTTaGAAGGCATCTTCCGTTCATTTTCACAGTGATTATAGAAGTGAA +
Preference number: 1 (lower is better)
Translates to: WTAHAMGRQGAGLGL*KASSVHFHSDYRSE
Trigger: TTCACTTCTATAATCACTGTGAAAATGAACGGAAGATGCCTTTCAAAGGCCGAGGCCAGCGCCCTGACGGCCCATGGCATGTGCAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CCA 90 bp TTCCCTTCTCTGCTTGGTATCTTAAAGTCAACATCTTCTTCTCCCTaGTTTCCTGCCCTTGGTACACAGCCCTCTCCACTGGGCTGTCCA +
Preference number: 1 (lower is better)
Translates to: FPSLLGILKSTSSSP*FPALGTQPSPLGCP
Trigger: TGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAAACCAGGGAGAAGAAGATGTTGACTTTAAGATACCAAGCAGAGAAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CCA 90 bp GAGTTGGATACAAACATCCCAAGAGCTAGGGGTGCCTTTACTGGCTaGAAGGTGACCGTTCCATTTCCCCAACATGAACTCAGAAAGCTT +
Preference number: 1 (lower is better)
Translates to: ELDTNIPRARGAFTG*KVTVPFPQHELRKL
Trigger: AAGCTTTCTGAGTTCATGTTGGGGAAATGGAACGGTCACCTTCCAGCCAGTAAAGGCACCCCTAGCTCTTGGGATGTTTGTATCCAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CAA 90 bp TGCTTGCAGGCAGGGGGCGCGCCGGCAGCCCGCACGCTGTCGGTCTaGCTGCTCTTGGACTCCATGGGGAACAGTGTGGGCGCCATCGGG +
Preference number: 2 (lower is better)
Translates to: CLQAGGAPAARTLSV*LLLDSMGNSVGAIG
Trigger: CCCGATGGCGCCCACACTGTTCCCCATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGCGGGCTGCCGGCGCGCCCCCTGCCTGCAAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR CAA 90 bp ATGACGGTCGTGGGGTTGGTCATCGTCTTCTTCTCGGCTAGGTGCTaGCAGGCAGGGGGCGCGCCGGCAGCCCGCACGCTGTCGGTCTTG +
Preference number: 2 (lower is better)
Translates to: MTVVGLVIVFFSARC*QAGGAPAARTLSVL
Trigger: CAAGACCGACAGCGTGCGGGCTGCCGGCGCGCCCCCTGCCTGCAAGCACCTAGCCGAGAAGAAGACGATGACCAACCCCACGACCGTCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR-3UTR GCA 90 bp CGGTTTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACCCACCTCCTTCGTGTaGCTCGCCGATGCCCTGCAC +
Preference number: 2 (lower is better)
Translates to: RFPRPAGHPQREAPHPWPPTSFV*LADALH
Trigger: GTGCAGGGCATCGGCGAGGCACACGAAGGAGGTGGG...TGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAAACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGCACACCTCTGCCTGGGCTaGACCCCAGGCCCACGGGCA +
Preference number: 2 (lower is better)
Translates to: PSSKRLNDSSVQPRISLAHLCLG*TPGPRA
Trigger: TGCCCGTGGGCCTGGGGTGCAGCCCAGGCAGAGGTG...TGCGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp AGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCTGTCGCGGAGGGGGTGGACTaGGGGCCAAGCTCACTGCCC +
Preference number: 2 (lower is better)
Translates to: RTVTRILLAALLPRLCPVAEGVD*GPSSLP
Trigger: GGGCAGTGAGCTTGGCCCTCAGTCCACCCCCTCCGC...GACAGGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGCCTGCTTGCCTGCCTCCCTCCATCCACCTCTaGCTGGGCTGCACCCCAGGC +
Preference number: 2 (lower is better)
Translates to: HRLRSQRPAPELMPACLPPSIHL*LGCTPG
Trigger: GCCTGGGGTGCAGCCCAGGCAGAGGTGGATGGAGGG...AGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp ACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCCTCGGCTGCCATGCCCCTTCCCTaGGAAGGTTTGCCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: TSWAPTARSSTPMATASAAMPLP*EGLPAF
Trigger: GAAGGCAGGCAAACCTTCCCAGGGAAGGGGCATGGC...AGCCGAGGCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CAA 90 bp CACAGCACCCGGGGCCCTGACCGCCAGGCAGTTCCTGAGGGAGGATaGCAAAGCCTCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAG +
Preference number: 2 (lower is better)
Translates to: HSTRGPDRQAVPEGG*QSLQTSPGPARDTK
Trigger: CTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGAGGCTTTGCAATCCTCCCTCAGGAACTGCCTGGCGGTCAGGGCCCCGGGTGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CGGTTTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCAATTGTGGACTGCACATaGCATGGGCCGTCAGGGCGC +
Preference number: 2 (lower is better)
Translates to: RFPRPAGHPQREAPHPWPIVDCT*HGPSGR
Trigger: GCGCCCTGACGGCCCATGGCATGTGCAGTCCACAAT...TGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAAACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GGTCAGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCTGCTCGCTGCACTCCTaGCACGGCTGTGCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: GQDCDQNLARCTPATAVPCSLHS*HGCALS
Trigger: GGACAGGGCACAGCCGTGGCAGGAGTGCAGCGAGCA...GGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp CACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGCCTGCTTGCCTGCCTAGCGGGGTCACATCGTaGAGGAGGCAGGGTCGGGGA +
Preference number: 2 (lower is better)
Translates to: HRLRSQRPAPELMPACLPSGVTS*RRQGRG
Trigger: TCCCCGACCCTGCCTCCTCCACGATGTGACCCCGCT...AGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp CACCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGTCCCCTGCAGTCTGTTaGGACACAGCACCCGGGGCC +
Preference number: 2 (lower is better)
Translates to: HHPPRGSMTAPCSPASASSPAVC*DTAPGA
Trigger: GGCCCCGGGTGCTGTGTCCCAACAGACTGCAGGGGA...CGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp AGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGACCCACGGGCAGGTGCTaGCCACCCTCCCTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: SLGKAFSRPWHFSHHPPRPTGRC*PPSLPL
Trigger: CAGAGGAAGGGAGGGTGGCCAGCACCTGCCCGTGGG...TCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp CCATCTGCTGCTAGCTCAAGGTCCTCCCTTCTGAGGCACCCCACGTCTCCAGCCTCGGGGAGCACAGAGTaGGTCCTCCCAACCTGGGAC +
Preference number: 2 (lower is better)
Translates to: PSAASSRSSLLRHPTSPASGSTE*VLPTWD
Trigger: GTCCCAGGTTGGGAGGACTCACTCTGTGCTCCCCGA...GGCTGGAGACGTGGGGTGCCTCAGAAGGGAGGACCTTGAGCTAGCAGCAGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp GTGCAGTGGACAGGGAGCGCCAGCAGGTCAGGCATGAGTACAGACAGGCAAAGAGCCAATGCAGGCAGCTaGGGCTGTGCCCCACCCCCT +
Preference number: 2 (lower is better)
Translates to: VQWTGSASRSGMSTDRQRANAGS*GCAPPP
Trigger: AGGGGGTGGGGCACAGCCTCAGCTGCCTGCATTGGC...TCTTTGCCTGTCTGTACTCATGCCTGACCTGCTGGCGCTCCCTGTCCACTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp TTCCTGCCCTTGGTACACAGCCCTCTCCACTGGGCTGTCCAAGTCAAGGGACAGGCCAATGCAGGCAGCTaGGGCTGTGCCCCACCCCCT +
Preference number: 2 (lower is better)
Translates to: FLPLVHSPLHWAVQVKGQANAGS*GCAPPP
Trigger: AGGGGGTGGGGCACAGCCTCAGCTGCCTGCATTGGC...CTGTCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp CACCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGGAGCTTCCCAAAACATaGGGCGCACGGCCATGCCCC +
Preference number: 2 (lower is better)
Translates to: HHPPRGSMTAPCSPASASELPKT*GARPCP
Trigger: GGGGCATGGCCGTGCGCCTCATGTTTTGGGAAGCTC...CGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp CCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGCACAAGGTCCTCCCTTCTaGGGCACCCCACGTCTCCAG +
Preference number: 2 (lower is better)
Translates to: PSSKRLNDSSVQPRISLAQGPPF*GTPRLQ
Trigger: CTGGAGACGTGGGGTGCCTCAGAAGGGAGGACCTTG...TGCGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp GGTCAGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCCTCCAAGAGGCTCAATaGCAGCTCCGTGCAGCCCCG +
Preference number: 2 (lower is better)
Translates to: GQDCDQNLARCTPATAVPLQEAQ*QLRAAP
Trigger: CGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAG...GGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp GTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAGCCGGGTAGACCTCGATaGCGGTCGTGGGGTTGGTCA +
Preference number: 2 (lower is better)
Translates to: VSARLSAAPGTSPTILQEPGRPR*RSWGWS
Trigger: TGACCAACCCCACGACCGTCATCGAGGTCTACCCGG...CTCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR-3UTR GCA 90 bp GGGCAGGGACACAGACGCTGGAAGCCAGGGTGCAGCAGCGAGGGGAGAAGCCCCAGCTCACTGCCCCCTTaGTGTACTCAGCTTCTGATG +
Preference number: 2 (lower is better)
Translates to: GQGHRRWKPGCSSEGRSPSSLPP*CTQLLM
Trigger: CATCAGAAGCTGAGTACAGCAAGGGGGCAGTGAGCT...GGGGCTTCTCCCCTCGCTGCTGCACCCTGGCTTCCAGCGTCTGTGTCCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp TGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCCTCGGCTTCTTCTGCCTCGCCGATGCCCTaGACTTTTCCTAGTGCACCC +
Preference number: 2 (lower is better)
Translates to: WAPTARSSTPMATASASSASPMP*TFPSAP
Trigger: GGGTGCACTAGGAAAAGTGCAGGGCATCGGCGAGGC...AGAAGAAGCCGAGGCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp TTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCTGCCCCACCTCCTTCGTGTaGCTCGCCGATGCCCTGCAC +
Preference number: 2 (lower is better)
Translates to: FPKHEAHGHAPSLGRFACPTSFV*LADALH
Trigger: GTGCAGGGCATCGGCGAGGCACACGAAGGAGGTGGG...GCAGGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CCATCTGCTGCTAGCTCAAGGTCCTCCCTTCTGAGGCACCCCACGTCTCCAGCCGTCAACCCCACTGACTaGACAGCTGCCACGCAGGCG +
Preference number: 2 (lower is better)
Translates to: PSAASSRSSLLRHPTSPAVNPTD*TAATQA
Trigger: CGCCTGCGTGGCAGCTGTGCAGTCAGTGGGGTTGAC...GGCTGGAGACGTGGGGTGCCTCAGAAGGGAGGACCTTGAGCTAGCAGCAGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGAGGCCCACGGGCAGGTaGTGGCCACCCTCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: EDTWTLGLALAAPGTRSQRPTGR*WPPSLP
Trigger: AGGAAGGGAGGGTGGCCAGCACCTGCCCGTGGGCCT...CTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CCTCCCATCCCACCACTGCCTGGGTTCAAGGGTCAGTGCTCAAGAGTCCCACATAGGCCCACGGGCAGGTaGTGGCCACCCTCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: PPIPPLPGFKGQCSRVPHRPTGR*WPPSLP
Trigger: AGGAAGGGAGGGTGGCCAGCACCTGCCCGTGGGCCT...ATGTGGGACTCTTGAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GAAGCCAGGGGCCTTTGTAGCCCCACATTGCCCGGAGTTGGATACAAACATCCCCAGCCCGCCGCCTCCTaGCCTCCCATCCCACCACTG +
Preference number: 2 (lower is better)
Translates to: EARGLCSPTLPGVGYKHPQPAAS*PPIPPL
Trigger: CAGTGGTGGGATGGGAGGGCAGGAGGCGGCGGGCTG...GGGATGTTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAGGCCCCTGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp GCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGCGGTTTCCCAGAAGGAGGCGGAGGGGGTaGACTGAGGGCCAAGCTCAC +
Preference number: 2 (lower is better)
Translates to: ASPSHCAPELRDFLRFPRRRRRG*TEGQAH
Trigger: GTGAGCTTGGCCCTCAGTCCACCCCCTCCGCCTCCT...TCTGGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp AGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAAGGAGGCGGAGGGGGTaGACTGAGGGCCAAGCTCAC +
Preference number: 2 (lower is better)
Translates to: SLGKAFSRPWHFSHHPPRRRRRG*TEGQAH
Trigger: GTGAGCTTGGCCCTCAGTCCACCCCCTCCGCCTCCT...TCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp AGCTTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCTCCCCTGCAGTCTGTTaGGACACAGCACCCGGGGCC +
Preference number: 2 (lower is better)
Translates to: SFPKHEAHGHAPSLGRFASPAVC*DTAPGA
Trigger: GGCCCCGGGTGCTGTGTCCCAACAGACTGCAGGGGA...GGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp GTGCAGTGGACAGGGAGCGCCAGCAGGTCAGGCATGAGTACAGACAGGCAAAGACCCACGGGCAGGTGCTaGCCACCCTCCCTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: VQWTGSASRSGMSTDRQRPTGRC*PPSLPL
Trigger: CAGAGGAAGGGAGGGTGGCCAGCACCTGCCCGTGGG...TCTTTGCCTGTCTGTACTCATGCCTGACCTGCTGGCGCTCCCTGTCCACTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp GCAGTCTGTTGGGACACAGCACCCGGGGCCCTGACCGCCAGGCAGTTCCTGAGGCGGTCTTGCTGCTCTTaGACTCCATGGGGAACAGTG +
Preference number: 2 (lower is better)
Translates to: AVCWDTAPGALTARQFLRRSCCS*TPWGTV
Trigger: CACTGTTCCCCATGGAGTCCAAGAGCAGCAAGACCG...CCTCAGGAACTGCCTGGCGGTCAGGGCCCCGGGTGCTGTGTCCCAACAGACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR-3UTR TCA 90 bp CCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGCACCGCCAGGCAGTTCCTaGGGGAGGATTGCAAAGCCT +
Preference number: 2 (lower is better)
Translates to: PSSKRLNDSSVQPRISLAPPGSS*GRIAKP
Trigger: AGGCTTTGCAATCCTCCCTCAGGAACTGCCTGGCGG...TGCGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp CTTCTGAGGCACCCCACGTCTCCAGCCCAGAAGGCTCTTCCCTTCTCTGCTTGGTTCCCACTGCGCACCTaGGCTGCGGGATTTCCTGCG +
Preference number: 2 (lower is better)
Translates to: LLRHPTSPAQKALPFSAWFPLRT*AAGFPA
Trigger: CGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAA...CCAAGCAGAGAAGGGAAGAGCCTTCTGGGCTGGAGACGTGGGGTGCCTCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp AGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCTGTCTTCCCACTGCGCACCTaGGCTGCGGGATTTCCTGCG +
Preference number: 2 (lower is better)
Translates to: RTVTRILLAALLPRLCPVFPLRT*AAGFPA
Trigger: CGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAA...GACAGGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp GCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGCGGTTTCCCAGAGAGCTTCCCAAAACATaGGGCGCACGGCCATGCCCC +
Preference number: 2 (lower is better)
Translates to: ASPSHCAPELRDFLRFPRELPKT*GARPCP
Trigger: GGGGCATGGCCGTGCGCCTCATGTTTTGGGAAGCTC...TCTGGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGCACAAGAAGCCCTGCCCTaGCCCAACCTCATGGGATCC +
Preference number: 2 (lower is better)
Translates to: PSSKRLNDSSVQPRISLAQEALP*PNLMGS
Trigger: GGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTG...TGCGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp ACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCCTCGGCTGACTTCTCCAGGCCCTaGCAGGGACACAAAGTAGAA +
Preference number: 2 (lower is better)
Translates to: TSWAPTARSSTPMATASADFSRP*QGHKVE
Trigger: TTCTACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTC...AGCCGAGGCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CCATCTGCTGCTAGCTCAAGGTCCTCCCTTCTGAGGCACCCCACGTCTCCAGCCGAGCAGACCGTCCCCTaGAGTCTGTTGGGACACAGC +
Preference number: 2 (lower is better)
Translates to: PSAASSRSSLLRHPTSPAEQTVP*SLLGHS
Trigger: GCTGTGTCCCAACAGACTGCAGGGGACGGTCTGCTC...GGCTGGAGACGTGGGGTGCCTCAGAAGGGAGGACCTTGAGCTAGCAGCAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CCTCCCATCCCACCACTGCCTGGGTTCAAGGGTCAGTGCTCAAGAGTCCCACATCCCACCTCCTTCGTGTaGCTCGCCGATGCCCTGCAC +
Preference number: 2 (lower is better)
Translates to: PPIPPLPGFKGQCSRVPHPTSFV*LADALH
Trigger: GTGCAGGGCATCGGCGAGGCACACGAAGGAGGTGGG...ATGTGGGACTCTTGAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CCACTTGCATCCACCTCTGTCCACTGGACTCCCCTCCAAGCTGGCCTCGCTACCGCAAGTCCTTCCCACTaGGCACCTGAGCTGCGGGAT +
Preference number: 2 (lower is better)
Translates to: PLASTSVHWTPLQAGLATASPSH*APELRD
Trigger: ATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC...GGTAGCGAGGCCAGCTTGGAGGGGAGTCCAGTGGACAGAGGTGGATGCAAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GGTCAGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCGCAAGTCCTTCCCACTaGGCACCTGAGCTGCGGGAT +
Preference number: 2 (lower is better)
Translates to: GQDCDQNLARCTPATAVPASPSH*APELRD
Trigger: ATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC...GGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp ACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCCTCGGCTTTCCCTGGGAAGGTTTaGCTGCCTTCCCACGGAATA +
Preference number: 2 (lower is better)
Translates to: TSWAPTARSSTPMATASAFPGKV*LPSHGI
Trigger: TATTCCGTGGGAAGGCAGGCAAACCTTCCCAGGGAA...AGCCGAGGCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGTGCTCGCTGCACTCCTaGCACGGCTGTGCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: EDTWTLGLALAAPGTRSQCSLHS*HGCALS
Trigger: GGACAGGGCACAGCCGTGGCAGGAGTGCAGCGAGCA...CTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp ACAAGAAGCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATAGGAGGCGGAGGGGGTaGACTGAGGGCCAAGCTCAC +
Preference number: 2 (lower is better)
Translates to: TRSPALPQPHGILRFRDHRRRRG*TEGQAH
Trigger: GTGAGCTTGGCCCTCAGTCCACCCCCTCCGCCTCCT...ATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp AGCTTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCCAGGGACACAGACGCTaGAAGCCAGGGTGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: SFPKHEAHGHAPSLGRFAQGHRR*KPGCSS
Trigger: GCTGCTGCACCCTGGCTTCCAGCGTCTGTGTCCCTG...GGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp TTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGGACCCTCTCTCTTCCAAGGCCAGCGGGGTCACATCGTaGAGGAGGCAGGGTCGGGGA +
Preference number: 2 (lower is better)
Translates to: LALAAPGTRSQDPLSSKASGVTS*RRQGRG
Trigger: TCCCCGACCCTGCCTCCTCCACGATGTGACCCCGCT...GGCCTTGGAAGAGAGAGGGTCCTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp CCTCCCATCCCACCACTGCCTGGGTTCAAGGGTCAGTGCTCAAGAGTCCCACATTCCCCTGCAGTCTGTTaGGACACAGCACCCGGGGCC +
Preference number: 2 (lower is better)
Translates to: PPIPPLPGFKGQCSRVPHSPAVC*DTAPGA
Trigger: GGCCCCGGGTGCTGTGTCCCAACAGACTGCAGGGGA...ATGTGGGACTCTTGAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp GAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGGACTCCCCTCCAAGCTaGCCTCGCTACCCCAGAGGG +
Preference number: 2 (lower is better)
Translates to: EDTWTLGLALAAPGTRSQDSPPS*PRYPRG
Trigger: CCCTCTGGGGTAGCGAGGCCAGCTTGGAGGGGAGTC...CTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp GTGCAGTGGACAGGGAGCGCCAGCAGGTCAGGCATGAGTACAGACAGGCAAAGAAGGGGTGTTTCCTCCTaGCCCCTGTCCCAGGCAGCC +
Preference number: 2 (lower is better)
Translates to: VQWTGSASRSGMSTDRQRRGVSS*PLSQAA
Trigger: GGCTGCCTGGGACAGGGGCCAGGAGGAAACACCCCT...TCTTTGCCTGTCTGTACTCATGCCTGACCTGCTGGCGCTCCCTGTCCACTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CAA 90 bp TCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTaGCCTGCCTTCCCACGGAATAGCAAGTCCTTCCCACTGCGCACC +
Preference number: 2 (lower is better)
Translates to: SQNMRRTAMPLPWEG*PAFPRNSKSFPLRT
Trigger: GGTGCGCAGTGGGAAGGACTTGCTATTCCGTGGGAAGGCAGGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp CTCCTTCGTGTGCCTCGCCGATGCCCTGCACTTTTCCTAGTGCACCCTCATCAGTCGGGGAGCACAGAGTaGGTCCTCCCAACCTGGGAC +
Preference number: 2 (lower is better)
Translates to: LLRVPRRCPALFLVHPHQSGSTE*VLPTWD
Trigger: GTCCCAGGTTGGGAGGACTCACTCTGTGCTCCCCGA...CTGATGAGGGTGCACTAGGAAAAGTGCAGGGCATCGGCGAGGCACACGAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp GCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGCGGTTTCCCAGACAGACACAAGGGCTCTaGGCGGGGTCACATCGTGGA +
Preference number: 2 (lower is better)
Translates to: ASPSHCAPELRDFLRFPRQTQGL*AGSHRG
Trigger: TCCACGATGTGACCCCGCTCAGAGCCCTTGTGTCTG...TCTGGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp TTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCTGCCCGCCAGGCAGTTCCTaGGGGAGGATTGCAAAGCCT +
Preference number: 2 (lower is better)
Translates to: FPKHEAHGHAPSLGRFACPPGSS*GRIAKP
Trigger: AGGCTTTGCAATCCTCCCTCAGGAACTGCCTGGCGG...GCAGGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp AGCTTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCTGTCTGGCACAGCTGTaGTGGAGCAGACCGTCCCCT +
Preference number: 2 (lower is better)
Translates to: SFPKHEAHGHAPSLGRFACLAQL*WSRPSP
Trigger: AGGGGACGGTCTGCTCCATCACAGCTGTGCCAGACA...GGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp AGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGACCCCATGACTGTGCCTaGGTTCCAAGGGGACAGAGC +
Preference number: 2 (lower is better)
Translates to: SLGKAFSRPWHFSHHPPRPHDCA*VPRGQS
Trigger: GCTCTGTCCCCTTGGAACTCAGGCACAGTCATGGGG...TCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp ACGGCTGTGCCCTGTCCCCTGCGTTTGTCCCATCTGCTGCTAGCTCAAGGTCCTCCCCATGACTGTGCCTaGGTTCCAAGGGGACAGAGC +
Preference number: 2 (lower is better)
Translates to: TAVPCPLRLSHLLLAQGPPHDCA*VPRGQS
Trigger: GCTCTGTCCCCTTGGAACTCAGGCACAGTCATGGGG...AGGACCTTGAGCTAGCAGCAGATGGGACAAACGCAGGGGACAGGGCACAGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp AGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAACCAGTCAACCCCACTaGCTGCACAGCTGCCACGCA +
Preference number: 2 (lower is better)
Translates to: SLGKAFSRPWHFSHHPPRTSQPH*LHSCHA
Trigger: TGCGTGGCAGCTGTGCAGTCAGTGGGGTTGACTGGT...TCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp TTCCTGCCCTTGGTACACAGCCCTCTCCACTGGGCTGTCCAAGTCAAGGGACAGCCCCTCTCTCGACTCTaGCCCCCAAGCCCTCCCATT +
Preference number: 2 (lower is better)
Translates to: FLPLVHSPLHWAVQVKGQPLSRL*PPSPPI
Trigger: AATGGGAGGGCTTGGGGGTCAGAGTCGAGAGAGGGG...CTGTCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp ACGGCTGTGCCCTGTCCCCTGCGTTTGTCCCATCTGCTGCTAGCTCAAGGTCCTCAGGACAAGAAGCCCTaGCCTGCCCCAACCTCATGG +
Preference number: 2 (lower is better)
Translates to: TAVPCPLRLSHLLLAQGPQDKKP*PAPTSW
Trigger: CCATGAGGTTGGGGCAGGGCAGGGCTTCTTGTCCTG...AGGACCTTGAGCTAGCAGCAGATGGGACAAACGCAGGGGACAGGGCACAGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CTTCTGAGGCACCCCACGTCTCCAGCCCAGAAGGCTCTTCCCTTCTCTGCTTGGCAGGACAAGAAGCCCTaGCCTGCCCCAACCTCATGG +
Preference number: 2 (lower is better)
Translates to: LLRHPTSPAQKALPFSAWQDKKP*PAPTSW
Trigger: CCATGAGGTTGGGGCAGGGCAGGGCTTCTTGTCCTG...CCAAGCAGAGAAGGGAAGAGCCTTCTGGGCTGGAGACGTGGGGTGCCTCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp AGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCTGTCCAGGACAAGAAGCCCTaGCCTGCCCCAACCTCATGG +
Preference number: 2 (lower is better)
Translates to: RTVTRILLAALLPRLCPVQDKKP*PAPTSW
Trigger: CCATGAGGTTGGGGCAGGGCAGGGCTTCTTGTCCTG...GACAGGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GCAGTCTGTTGGGACACAGCACCCGGGGCCCTGACCGCCAGGCAGTTCCTGAGGTCTATCGTCTCTGCCTaGTGCTTCCTTCCGAGTGAA +
Preference number: 2 (lower is better)
Translates to: AVCWDTAPGALTARQFLRSIVSA*CFLPSE
Trigger: TTCACTCGGAAGGAAGCAGCAGGCAGAGACGATAGA...CCTCAGGAACTGCCTGGCGGTCAGGGCCCCGGGTGCTGTGTCCCAACAGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGCGGTTTCCCAGAATTGTGGACTGCACATaGCATGGGCCGTCAGGGCGC +
Preference number: 2 (lower is better)
Translates to: ASPSHCAPELRDFLRFPRIVDCT*HGPSGR
Trigger: GCGCCCTGACGGCCCATGGCATGTGCAGTCCACAAT...TCTGGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp TTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCTGCGCCTCGCCGATGCCCTaGACTTTTCCTAGTGCACCC +
Preference number: 2 (lower is better)
Translates to: FPKHEAHGHAPSLGRFACASPMP*TFPSAP
Trigger: GGGTGCACTAGGAAAAGTGCAGGGCATCGGCGAGGC...GCAGGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGCACGTGTGCCTCGCCGATaGCCTGCACTTTTCCTAGTG +
Preference number: 2 (lower is better)
Translates to: PSSKRLNDSSVQPRISLARVPRR*PALFLV
Trigger: CACTAGGAAAAGTGCAGGGCATCGGCGAGGCACACG...TGCGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAGCGTGTGCCTCGCCGATaGCCTGCACTTTTCCTAGTG +
Preference number: 2 (lower is better)
Translates to: VSARLSAAPGTSPTILQERVPRR*PALFLV
Trigger: CACTAGGAAAAGTGCAGGGCATCGGCGAGGCACACG...CTCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CCATCTGCTGCTAGCTCAAGGTCCTCCCTTCTGAGGCACCCCACGTCTCCAGCCACTGCGCACCTGAGCTaGGGGATTTCCTGCGGTTTC +
Preference number: 2 (lower is better)
Translates to: PSAASSRSSLLRHPTSPATAHLS*GISCGF
Trigger: GAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGT...GGCTGGAGACGTGGGGTGCCTCAGAAGGGAGGACCTTGAGCTAGCAGCAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAGCAGAATCTTGCTCGCTaGACTCCTGCCACGGCTGTG +
Preference number: 2 (lower is better)
Translates to: VSARLSAAPGTSPTILQEQNLAR*TPATAV
Trigger: CACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTG...CTCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CACCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGCAGAATCTTGCTCGCTaGACTCCTGCCACGGCTGTG +
Preference number: 2 (lower is better)
Translates to: HHPPRGSMTAPCSPASASQNLAR*TPATAV
Trigger: CACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTG...CGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GGTCAGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCCACCCTCCCTTCCTCTaGAGGTTTCTGGGTCAGGAC +
Preference number: 2 (lower is better)
Translates to: GQDCDQNLARCTPATAVPHPPFL*RFLGQD
Trigger: GTCCTGACCCAGAAACCTGCAGAGGAAGGGAGGGTG...GGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CTACTTTCTTCCCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGTCTCGGCTAGGTGCTTaGAGGCAGGGGGCGCGCCGG +
Preference number: 2 (lower is better)
Translates to: LLSSLPGITWKTPGHWGWSRLGA*RQGARR
Trigger: CCGGCGCGCCCCCTGCCTGCAAGCACCTAGCCGAGA...CCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGGGAAGAAAGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR-3UTR GCA 90 bp TCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCATCCGAACTCCGCCAGCAGCCGTaGCTGGCGGGCCTTAGTAGT +
Preference number: 2 (lower is better)
Translates to: SSPGLSRKPLGLMVQASELRQQP*LAGLSS
Trigger: ACTACTAAGGCCCGCCAGGCACGGCTGCTGGCGGAG...TTCGGATGCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR-3UTR CCA 90 bp TTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCCACAAAGTAGAAGGCTaGGCTGGAGCTGCATGGGTA +
Preference number: 2 (lower is better)
Translates to: FPDQLGTHSAKLHTHGHCHKVEG*AGAAWV
Trigger: TACCCATGCAGCTCCAGCCCAGCCTTCTACTTTGTG...GCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp GTGCAGTGGACAGGGAGCGCCAGCAGGTCAGGCATGAGTACAGACAGGCAAAGAGTTTCCCAGACCAGCTaGGCACCCACAGCGCGAAGC +
Preference number: 2 (lower is better)
Translates to: VQWTGSASRSGMSTDRQRVSQTS*APTARS
Trigger: GCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAAAC...TCTTTGCCTGTCTGTACTCATGCCTGACCTGCTGGCGCTCCCTGTCCACTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp AGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGATCCACCTCTGTCCACTaGACTCCCCTCCAAGCTGGC +
Preference number: 2 (lower is better)
Translates to: SLGKAFSRPWHFSHHPPRSTSVH*TPLQAG
Trigger: GCCAGCTTGGAGGGGAGTCCAGTGGACAGAGGTGGA...TCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp CCATCTGCTGCTAGCTCAAGGTCCTCCCTTCTGAGGCACCCCACGTCTCCAGCCCACAGCCCTCTCCACTaGGCTGTCCAAGTCAAGGGA +
Preference number: 2 (lower is better)
Translates to: PSAASSRSSLLRHPTSPAHSPLH*AVQVKG
Trigger: TCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTG...GGCTGGAGACGTGGGGTGCCTCAGAAGGGAGGACCTTGAGCTAGCAGCAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp ATCCTCTTCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCAGGGGTGTTTCCTCCTaGCCCCTGTCCCAGGCAGCC +
Preference number: 2 (lower is better)
Translates to: ILFQPRLVQEASGSNGASRGVSS*PLSQAA
Trigger: GGCTGCCTGGGACAGGGGCCAGGAGGAAACACCCCT...GCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGAAGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp CACCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGTGCTCTTGGACTCCATaGGGAACAGTGTGGGCGCCA +
Preference number: 2 (lower is better)
Translates to: HHPPRGSMTAPCSPASASCSWTP*GTVWAP
Trigger: TGGCGCCCACACTGTTCCCCATGGAGTCCAAGAGCA...CGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR-3UTR TCA 90 bp CACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGCCTGCTTGCCTGCCTGCTGTACTCAGCTTCTaGTGGCCTTGCTGCCCAGTT +
Preference number: 2 (lower is better)
Translates to: HRLRSQRPAPELMPACLPAVLSF*WPCCPV
Trigger: AACTGGGCAGCAAGGCCATCAGAAGCTGAGTACAGC...AGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp AGTGAGTCCTCCCAACCTGGGACAATTTTGCATAAGCCCTTCCTGCTAGGTGTCGCGGAGGGGGTGGACTaGGGGCCAAGCTCACTGCCC +
Preference number: 2 (lower is better)
Translates to: SESSQPGTILHKPFLLGVAEGVD*GPSSLP
Trigger: GGGCAGTGAGCTTGGCCCTCAGTCCACCCCCTCCGC...GACACCTAGCAGGAAGGGCTTATGCAAAATTGTCCCAGGTTGGGAGGACTCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp ACAAGAAGCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATCAGACACAAGGGCTCTaGGCGGGGTCACATCGTGGA +
Preference number: 2 (lower is better)
Translates to: TRSPALPQPHGILRFRDHQTQGL*AGSHRG
Trigger: TCCACGATGTGACCCCGCTCAGAGCCCTTGTGTCTG...ATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp TTCCTGCCCTTGGTACACAGCCCTCTCCACTGGGCTGTCCAAGTCAAGGGACAGTGTCTGGCACAGCTGTaGTGGAGCAGACCGTCCCCT +
Preference number: 2 (lower is better)
Translates to: FLPLVHSPLHWAVQVKGQCLAQL*WSRPSP
Trigger: AGGGGACGGTCTGCTCCATCACAGCTGTGCCAGACA...CTGTCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp GCTTCTCCCCCACCTTACCTTCCAAACCAGTCAACCCCACTGACTGCACAGCTGTTCCCACTGCGCACCTaGGCTGCGGGATTTCCTGCG +
Preference number: 2 (lower is better)
Translates to: ASPPPYLPNQSTPLTAQLFPLRT*AAGFPA
Trigger: CGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAA...CAGCTGTGCAGTCAGTGGGGTTGACTGGTTTGGAAGGTAAGGTGGGGGAGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp AGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGACAAGCCCTCCCATTTTaGGGTCACACACTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: SLGKAFSRPWHFSHHPPRQALPF*GHTLPS
Trigger: GGAGGGGAGTGTGTGACCTCAAAATGGGAGGGCTTG...TCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp ACAGACAGGCAAAGACACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGCCCCTCTCTCGACTCTaGCCCCCAAGCCCTCCCATT +
Preference number: 2 (lower is better)
Translates to: TDRQRHRLRSQRPAPELMPLSRL*PPSPPI
Trigger: AATGGGAGGGCTTGGGGGTCAGAGTCGAGAGAGGGG...CATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTGTCTTTGCCTGTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp ACAGACAGGCAAAGACACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGCTCCAAGAGGCTCAATaGCAGCTCCGTGCAGCCCCG +
Preference number: 2 (lower is better)
Translates to: TDRQRHRLRSQRPAPELMLQEAQ*QLRAAP
Trigger: CGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAG...CATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTGTCTTTGCCTGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGCAAGAAGCCCTGCCCTaGCCCAACCTCATGGGATCC +
Preference number: 2 (lower is better)
Translates to: EDTWTLGLALAAPGTRSQQEALP*PNLMGS
Trigger: GGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTG...CTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp TTCCTGCCCTTGGTACACAGCCCTCTCCACTGGGCTGTCCAAGTCAAGGGACAGCAAGAAGCCCTGCCCTaGCCCAACCTCATGGGATCC +
Preference number: 2 (lower is better)
Translates to: FLPLVHSPLHWAVQVKGQQEALP*PNLMGS
Trigger: GGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTG...CTGTCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CCTCCCATCCCACCACTGCCTGGGTTCAAGGGTCAGTGCTCAAGAGTCCCACATGAGGGCCAAGCTCACTaGCCCCTTGCTGTACTCAGC +
Preference number: 2 (lower is better)
Translates to: PPIPPLPGFKGQCSRVPHEGQAH*PLAVLS
Trigger: GCTGAGTACAGCAAGGGGGCAGTGAGCTTGGCCCTC...ATGTGGGACTCTTGAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGGAGGGCCAAGCTCACTaGCCCCTTGCTGTACTCAGC +
Preference number: 2 (lower is better)
Translates to: EDTWTLGLALAAPGTRSQEGQAH*PLAVLS
Trigger: GCTGAGTACAGCAAGGGGGCAGTGAGCTTGGCCCTC...CTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GCAGTCTGTTGGGACACAGCACCCGGGGCCCTGACCGCCAGGCAGTTCCTGAGGAGGCTGGGCTGGAGCTaGATGGGTATTTCATTGAAA +
Preference number: 2 (lower is better)
Translates to: AVCWDTAPGALTARQFLRRLGWS*MGISLK
Trigger: TTTCAATGAAATACCCATGCAGCTCCAGCCCAGCCT...CCTCAGGAACTGCCTGGCGGTCAGGGCCCCGGGTGCTGTGTCCCAACAGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp TTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGGACCCTCTCTCTTCCAAGGCCGAGCAGACCGTCCCCTaGAGTCTGTTGGGACACAGC +
Preference number: 2 (lower is better)
Translates to: LALAAPGTRSQDPLSSKAEQTVP*SLLGHS
Trigger: GCTGTGTCCCAACAGACTGCAGGGGACGGTCTGCTC...GGCCTTGGAAGAGAGAGGGTCCTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CTCCTTCGTGTGCCTCGCCGATGCCCTGCACTTTTCCTAGTGCACCCTCATCAGGAGCAGACCGTCCCCTaGAGTCTGTTGGGACACAGC +
Preference number: 2 (lower is better)
Translates to: LLRVPRRCPALFLVHPHQEQTVP*SLLGHS
Trigger: GCTGTGTCCCAACAGACTGCAGGGGACGGTCTGCTC...CTGATGAGGGTGCACTAGGAAAAGTGCAGGGCATCGGCGAGGCACACGAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp TTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGGACCCTCTCTCTTCCAAGGCCATTGTGGACTGCACATaGCATGGGCCGTCAGGGCGC +
Preference number: 2 (lower is better)
Translates to: LALAAPGTRSQDPLSSKAIVDCT*HGPSGR
Trigger: GCGCCCTGACGGCCCATGGCATGTGCAGTCCACAAT...GGCCTTGGAAGAGAGAGGGTCCTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGCATCCCACATTGTGGACTaGACATGCCATGGGCCGTCA +
Preference number: 2 (lower is better)
Translates to: PSSKRLNDSSVQPRISLASHIVD*TCHGPS
Trigger: TGACGGCCCATGGCATGTGCAGTCCACAATGTGGGA...TGCGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp TTCCTGCCCTTGGTACACAGCCCTCTCCACTGGGCTGTCCAAGTCAAGGGACAGGCCTCGCCGATGCCCTaGACTTTTCCTAGTGCACCC +
Preference number: 2 (lower is better)
Translates to: FLPLVHSPLHWAVQVKGQASPMP*TFPSAP
Trigger: GGGTGCACTAGGAAAAGTGCAGGGCATCGGCGAGGC...CTGTCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp AGCTTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCACTGCGCACCTGAGCTaGGGGATTTCCTGCGGTTTC +
Preference number: 2 (lower is better)
Translates to: SFPKHEAHGHAPSLGRFATAHLS*GISCGF
Trigger: GAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGT...GGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGCATCAGCTCCCTCCACTTaGATCCACCTCTGTCCACTG +
Preference number: 2 (lower is better)
Translates to: PSSKRLNDSSVQPRISLASAPST*IHLCPL
Trigger: CAGTGGACAGAGGTGGATGCAAGTGGAGGGAGCTGA...TGCGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAGTCAGCTCCCTCCACTTaGATCCACCTCTGTCCACTG +
Preference number: 2 (lower is better)
Translates to: VSARLSAAPGTSPTILQESAPST*IHLCPL
Trigger: CAGTGGACAGAGGTGGATGCAAGTGGAGGGAGCTGA...CTCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAGTTCTCCCTGGTTTCCTaGCCTTGGTACACAGCCCTC +
Preference number: 2 (lower is better)
Translates to: VSARLSAAPGTSPTILQEFSLVS*PWYTAL
Trigger: GAGGGCTGTGTACCAAGGGCAGGAAACCAGGGAGAA...CTCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp ACAGACAGGCAAAGACACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGCTCCTGCCACGGCTGTaGCCTGTCCCCTGCGTTTGT +
Preference number: 2 (lower is better)
Translates to: TDRQRHRLRSQRPAPELMLLPRL*PVPCVC
Trigger: ACAAACGCAGGGGACAGGGCACAGCCGTGGCAGGAG...CATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTGTCTTTGCCTGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp AGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGACTCCCATCCCACCACTaGCTGGGTTCAAGGGTCAGT +
Preference number: 2 (lower is better)
Translates to: SLGKAFSRPWHFSHHPPRLPSHH*LGSRVS
Trigger: ACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAG...TCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp ATTGCCCGGAGTTGGATACAAACATCCCAAGAGCTAGGGGTGCCTTTACTGGCTCAGCCCGCCGCCTCCTaGCCTCCCATCCCACCACTG +
Preference number: 2 (lower is better)
Translates to: IARSWIQTSQELGVPLLAQPAAS*PPIPPL
Trigger: CAGTGGTGGGATGGGAGGGCAGGAGGCGGCGGGCTG...AGCCAGTAAAGGCACCCCTAGCTCTTGGGATGTTTGTATCCAACTCCGGGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CCTCCCATCCCACCACTGCCTGGGTTCAAGGGTCAGTGCTCAAGAGTCCCACATTCAATGACAGCTCCGTaGAGCCCCGCATCAGCCTCG +
Preference number: 2 (lower is better)
Translates to: PPIPPLPGFKGQCSRVPHSMTAP*SPASAS
Trigger: CGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGA...ATGTGGGACTCTTGAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGTCAATGACAGCTCCGTaGAGCCCCGCATCAGCCTCG +
Preference number: 2 (lower is better)
Translates to: EDTWTLGLALAAPGTRSQSMTAP*SPASAS
Trigger: CGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGA...CTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp TCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCATCCGAATTCTTCTCGGCTAGGTaGTTGCAGGCAGGGGGCGCG +
Preference number: 2 (lower is better)
Translates to: SSPGLSRKPLGLMVQASEFFSAR*LQAGGA
Trigger: CGCGCCCCCTGCCTGCAAGCACCTAGCCGAGAAGAA...TTCGGATGCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR-3UTR GCA 90 bp GCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATGAGAATACAGCCGGGCCGTCTTTaGATCCTCCACGGCTCCATT +
Preference number: 2 (lower is better)
Translates to: ALPCPNLMGSCVSGTMRIQPGRL*ILHGSI
Trigger: AATGGAGCCGTGGAGGATGCAAAGACGGCCCGGCTG...TATTCTCATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR-3UTR GCA 90 bp CCACTTGCATCCACCTCTGTCCACTGGACTCCCCTCCAAGCTGGCCTCGCTACCGATGATGCAGGAGGCTaGCAGGGCAGAACTGGTGAT +
Preference number: 2 (lower is better)
Translates to: PLASTSVHWTPLQAGLATDDAGG*QGRTGD
Trigger: ATCACCAGTTCTGCCCTGGCAGCCTCCTGCATCATC...GGTAGCGAGGCCAGCTTGGAGGGGAGTCCAGTGGACAGAGGTGGATGCAAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR-3UTR CCA 90 bp GCTTCTCCCCCACCTTACCTTCCAAACCAGTCAACCCCACTGACTGCACAGCTGCAGGGACACAGACGCTaGAAGCCAGGGTGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: ASPPPYLPNQSTPLTAQLQGHRR*KPGCSS
Trigger: GCTGCTGCACCCTGGCTTCCAGCGTCTGTGTCCCTG...CAGCTGTGCAGTCAGTGGGGTTGACTGGTTTGGAAGGTAAGGTGGGGGAGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp GCCCACAGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCACAAAGTAGAAGGCTaGGCTGGAGCTGCATGGGTA +
Preference number: 2 (lower is better)
Translates to: AHSLGKAFSRPWHFSHHPHKVEG*AGAAWV
Trigger: TACCCATGCAGCTCCAGCCCAGCCTTCTACTTTGTG...AGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp GCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGCGGTTTCCCAGAGAAGCTCCACACCCATaGCCACTGCCTCGGCTTCTT +
Preference number: 2 (lower is better)
Translates to: ASPSHCAPELRDFLRFPREAPHP*PLPRLL
Trigger: AAGAAGCCGAGGCAGTGGCCATGGGTGTGGAGCTTC...TCTGGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp GTGCAGTGGACAGGGAGCGCCAGCAGGTCAGGCATGAGTACAGACAGGCAAAGAGCCATGCCCCTTCCCTaGGAAGGTTTGCCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: VQWTGSASRSGMSTDRQRAMPLP*EGLPAF
Trigger: GAAGGCAGGCAAACCTTCCCAGGGAAGGGGCATGGC...TCTTTGCCTGTCTGTACTCATGCCTGACCTGCTGGCGCTCCCTGTCCACTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp CCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCTCCACCTCTGTCCACTaGACTCCCCTCCAAGCTGGC +
Preference number: 2 (lower is better)
Translates to: PPRHNMEDTWTLGLALAASTSVH*TPLQAG
Trigger: GCCAGCTTGGAGGGGAGTCCAGTGGACAGAGGTGGA...GGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp GTGCAGTGGACAGGGAGCGCCAGCAGGTCAGGCATGAGTACAGACAGGCAAAGAGCTTTCAGCCGCCCCTaGCACTTCTCCCACCATCCT +
Preference number: 2 (lower is better)
Translates to: VQWTGSASRSGMSTDRQRAFSRP*HFSHHP
Trigger: AGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGC...TCTTTGCCTGTCTGTACTCATGCCTGACCTGCTGGCGCTCCCTGTCCACTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CAA 90 bp AAGACGAGGATGATGCAGGAGGCTGCCAGGGCAGAACTGGTGATGTaGAACAGCCGGGCCGTCTTTGCATCCTCCACGGCTCCATTCAGG +
Preference number: 2 (lower is better)
Translates to: KTRMMQEAARAELVM*NSRAVFASSTAPFR
Trigger: CCTGAATGGAGCCGTGGAGGATGCAAAGACGGCCCGGCTGTTCAACATCACCAGTTCTGCCCTGGCAGCCTCCTGCATCATCCTCGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR-3UTR TCA 90 bp ATCCTCTTCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCCAGACACAAGGGCTCTaGGCGGGGTCACATCGTGGA +
Preference number: 2 (lower is better)
Translates to: ILFQPRLVQEASGSNGASQTQGL*AGSHRG
Trigger: TCCACGATGTGACCCCGCTCAGAGCCCTTGTGTCTG...GCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGAAGAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp ATCCTCTTCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCACCAGTCAACCCCACTaGCTGCACAGCTGCCACGCA +
Preference number: 2 (lower is better)
Translates to: ILFQPRLVQEASGSNGASTSQPH*LHSCHA
Trigger: TGCGTGGCAGCTGTGCAGTCAGTGGGGTTGACTGGT...GCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGAAGAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp AGGGAGGATTGCAAAGCCTCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTGAGGGCCAAGCTCACTaGCCCCTTGCTGTACTCAGC +
Preference number: 2 (lower is better)
Translates to: REDCKASRLLQALPGTQSEGQAH*PLAVLS
Trigger: GCTGAGTACAGCAAGGGGGCAGTGAGCTTGGCCCTC...ACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGAGGCTTTGCAATCCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GAAGCCAGGGGCCTTTGTAGCCCCACATTGCCCGGAGTTGGATACAAACATCCCCTGTGCCCTGTCCCCTaGGTTTGTCCCATCTGCTGC +
Preference number: 2 (lower is better)
Translates to: EARGLCSPTLPGVGYKHPLCPVP*VCPICC
Trigger: GCAGCAGATGGGACAAACGCAGGGGACAGGGCACAG...GGGATGTTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAGGCCCCTGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp ATAGTCGTTCACCTCGGTGGTGTCCGGGTAGACCTCGATGACGGTCGTGGGGTTGCACGCTGTCGGTCTTaGTGCTCTTGGACTCCATGG +
Preference number: 2 (lower is better)
Translates to: IVVHLGGVRVDLDDGRGVARCRS*CSWTPW
Trigger: CCATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGC...AACCCCACGACCGTCATCGAGGTCTACCCGGACACCACCGAGGTGAACGACTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR-3UTR CCA 90 bp GCTTCTCCCCCACCTTACCTTCCAAACCAGTCAACCCCACTGACTGCACAGCTGGCCATGCCCCTTCCCTaGGAAGGTTTGCCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: ASPPPYLPNQSTPLTAQLAMPLP*EGLPAF
Trigger: GAAGGCAGGCAAACCTTCCCAGGGAAGGGGCATGGC...CAGCTGTGCAGTCAGTGGGGTTGACTGGTTTGGAAGGTAAGGTGGGGGAGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp CACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGCCTGCTTGCCTGCCTCTCCCAGGCATAACATaGAAGACACCTGGACACTGG +
Preference number: 2 (lower is better)
Translates to: HRLRSQRPAPELMPACLPLPGIT*KTPGHW
Trigger: CCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAG...AGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp ACAGACAGGCAAAGACACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGCCGGTCCCCAGGGTATaGAAGCCAGGGGCCTTTGTA +
Preference number: 2 (lower is better)
Translates to: TDRQRHRLRSQRPAPELMPVPRV*KPGAFV
Trigger: TACAAAGGCCCCTGGCTTCCATACCCTGGGGACCGG...CATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTGTCTTTGCCTGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp GAAGCCAGGGGCCTTTGTAGCCCCACATTGCCCGGAGTTGGATACAAACATCCCCAAGCCCTCCCATTTTaGGGTCACACACTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: EARGLCSPTLPGVGYKHPQALPF*GHTLPS
Trigger: GGAGGGGAGTGTGTGACCTCAAAATGGGAGGGCTTG...GGGATGTTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAGGCCCCTGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CCACTTGCATCCACCTCTGTCCACTGGACTCCCCTCCAAGCTGGCCTCGCTACCATAAACATGTCTCAGTaGTTGTCTCCGCCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: PLASTSVHWTPLQAGLATINMSQ*LSPPAA
Trigger: GGCTGCTGGCGGAGACAAGCACTGAGACATGTTTAT...GGTAGCGAGGCCAGCTTGGAGGGGAGTCCAGTGGACAGAGGTGGATGCAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGCGGTTTCCCAGAAGCTCACTGCCCCCTTaGTGTACTCAGCTTCTGATG +
Preference number: 2 (lower is better)
Translates to: ASPSHCAPELRDFLRFPRSSLPP*CTQLLM
Trigger: CATCAGAAGCTGAGTACAGCAAGGGGGCAGTGAGCT...TCTGGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAGTCTATCGTCTCTGCCTaGTGCTTCCTTCCGAGTGAA +
Preference number: 2 (lower is better)
Translates to: VSARLSAAPGTSPTILQESIVSA*CFLPSE
Trigger: TTCACTCGGAAGGAAGCAGCAGGCAGAGACGATAGA...CTCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CCTCCCATCCCACCACTGCCTGGGTTCAAGGGTCAGTGCTCAAGAGTCCCACATTCCCACATTGTGGACTaGACATGCCATGGGCCGTCA +
Preference number: 2 (lower is better)
Translates to: PPIPPLPGFKGQCSRVPHSHIVD*TCHGPS
Trigger: TGACGGCCCATGGCATGTGCAGTCCACAATGTGGGA...ATGTGGGACTCTTGAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp AGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCTGTCTTCCCTGGGAAGGTTTaGCTGCCTTCCCACGGAATA +
Preference number: 2 (lower is better)
Translates to: RTVTRILLAALLPRLCPVFPGKV*LPSHGI
Trigger: TATTCCGTGGGAAGGCAGGCAAACCTTCCCAGGGAA...GACAGGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GTGCAGTGGACAGGGAGCGCCAGCAGGTCAGGCATGAGTACAGACAGGCAAAGATTCTCCCTGGTTTCCTaGCCTTGGTACACAGCCCTC +
Preference number: 2 (lower is better)
Translates to: VQWTGSASRSGMSTDRQRFSLVS*PWYTAL
Trigger: GAGGGCTGTGTACCAAGGGCAGGAAACCAGGGAGAA...TCTTTGCCTGTCTGTACTCATGCCTGACCTGCTGGCGCTCCCTGTCCACTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp GGTCAGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCAGTAGAAGGCTGGGCTaGAGCTGCATGGGTATTTCA +
Preference number: 2 (lower is better)
Translates to: GQDCDQNLARCTPATAVPSRRLG*SCMGIS
Trigger: TGAAATACCCATGCAGCTCCAGCCCAGCCTTCTACT...GGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp CCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGCATCCTTTGCTCTGATTTaGCCAATGCAGGCAGCTGAG +
Preference number: 2 (lower is better)
Translates to: PSSKRLNDSSVQPRISLASFALI*PMQAAE
Trigger: CTCAGCTGCCTGCATTGGCCAAATCAGAGCAAAGGA...TGCGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp ATCCTCTTCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCCACAGCCCTCTCCACTaGGCTGTCCAAGTCAAGGGA +
Preference number: 2 (lower is better)
Translates to: ILFQPRLVQEASGSNGASHSPLH*AVQVKG
Trigger: TCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTG...GCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGAAGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp TCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCATCCGAAAGTCGTTCACCTCGGTaGTGTCCGGGTAGACCTCGA +
Preference number: 2 (lower is better)
Translates to: SSPGLSRKPLGLMVQASESRSPR*CPGRPR
Trigger: TCGAGGTCTACCCGGACACCACCGAGGTGAACGACT...TTCGGATGCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR CAA 90 bp TTCTTCCCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTaGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGGACCCTCTCTCT +
Preference number: 2 (lower is better)
Translates to: FFPPRHNMEDTWTLG*ALAAPGTRSQDPLS
Trigger: AGAGAGAGGGTCCTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGGGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp GCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCTGCATGGGTATTTCAGCTGTACTCAGCTTCTaGTGGCCTTGCTGCCCAGTT +
Preference number: 2 (lower is better)
Translates to: ALPGTQSRRLGWSCMGISAVLSF*WPCCPV
Trigger: AACTGGGCAGCAAGGCCATCAGAAGCTGAGTACAGC...TGAAATACCCATGCAGCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp TCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCATCCGAATCTTGTCTCGCACTTTaGGGGAGTAGGCCAAGGCGA +
Preference number: 2 (lower is better)
Translates to: SSPGLSRKPLGLMVQASESCLAL*GSRPRR
Trigger: TCGCCTTGGCCTACTCCCTCAAAGTGCGAGACAAGA...TTCGGATGCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR-3UTR TCA 90 bp CCACTTGCATCCACCTCTGTCCACTGGACTCCCCTCCAAGCTGGCCTCGCTACCCTCCATTCAGGTCATTaGGAAGCTTCTTGTCTCGCA +
Preference number: 2 (lower is better)
Translates to: PLASTSVHWTPLQAGLATLHSGH*EASCLA
Trigger: TGCGAGACAAGAAGCTTCTCAATGACCTGAATGGAG...GGTAGCGAGGCCAGCTTGGAGGGGAGTCCAGTGGACAGAGGTGGATGCAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR-3UTR GCA 90 bp GTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAGAGGCTGGGCTGGAGCTaGATGGGTATTTCATTGAAA +
Preference number: 2 (lower is better)
Translates to: VSARLSAAPGTSPTILQERLGWS*MGISLK
Trigger: TTTCAATGAAATACCCATGCAGCTCCAGCCCAGCCT...CTCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGGACTTCTCCAGGCCCTaGCAGGGACACAAAGTAGAA +
Preference number: 2 (lower is better)
Translates to: EDTWTLGLALAAPGTRSQDFSRP*QGHKVE
Trigger: TTCTACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTC...CTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGCCTGCTTGCCTGCCTATCGTCTCTGCCTGCTaGTTCCTTCCGAGTGAATTT +
Preference number: 2 (lower is better)
Translates to: HRLRSQRPAPELMPACLPIVSAC*FLPSEF
Trigger: AAATTCACTCGGAAGGAAGCAGCAGGCAGAGACGAT...AGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp AGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCTGTCTCTATCGTCTCTGCCTaGTGCTTCCTTCCGAGTGAA +
Preference number: 2 (lower is better)
Translates to: RTVTRILLAALLPRLCPVSIVSA*CFLPSE
Trigger: TTCACTCGGAAGGAAGCAGCAGGCAGAGACGATAGA...GACAGGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GAAGCCAGGGGCCTTTGTAGCCCCACATTGCCCGGAGTTGGATACAAACATCCCTTCTCCCTGGTTTCCTaGCCTTGGTACACAGCCCTC +
Preference number: 2 (lower is better)
Translates to: EARGLCSPTLPGVGYKHPFSLVS*PWYTAL
Trigger: GAGGGCTGTGTACCAAGGGCAGGAAACCAGGGAGAA...GGGATGTTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAGGCCCCTGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp TTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCTGCAGTAGAAGGCTGGGCTaGAGCTGCATGGGTATTTCA +
Preference number: 2 (lower is better)
Translates to: FPKHEAHGHAPSLGRFACSRRLG*SCMGIS
Trigger: TGAAATACCCATGCAGCTCCAGCCCAGCCTTCTACT...GCAGGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp ATTGCCCGGAGTTGGATACAAACATCCCAAGAGCTAGGGGTGCCTTTACTGGCTGTTTCCCAGACCAGCTaGGCACCCACAGCGCGAAGC +
Preference number: 2 (lower is better)
Translates to: IARSWIQTSQELGVPLLAVSQTS*APTARS
Trigger: GCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAAAC...AGCCAGTAAAGGCACCCCTAGCTCTTGGGATGTTTGTATCCAACTCCGGGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp CACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGCCTGCTTGCCTGCCTCACATAAAAATGAGGTaGGAGGAGTGCAGTGGACAG +
Preference number: 2 (lower is better)
Translates to: HRLRSQRPAPELMPACLPHIKMR*EECSGQ
Trigger: CTGTCCACTGCACTCCTCCCACCTCATTTTTATGTG...AGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp AGTGAGTCCTCCCAACCTGGGACAATTTTGCATAAGCCCTTCCTGCTAGGTGTCCCGCCAGGCAGTTCCTaGGGGAGGATTGCAAAGCCT +
Preference number: 2 (lower is better)
Translates to: SESSQPGTILHKPFLLGVPPGSS*GRIAKP
Trigger: AGGCTTTGCAATCCTCCCTCAGGAACTGCCTGGCGG...GACACCTAGCAGGAAGGGCTTATGCAAAATTGTCCCAGGTTGGGAGGACTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp ATTGCCCGGAGTTGGATACAAACATCCCAAGAGCTAGGGGTGCCTTTACTGGCTTGTCTGGCACAGCTGTaGTGGAGCAGACCGTCCCCT +
Preference number: 2 (lower is better)
Translates to: IARSWIQTSQELGVPLLACLAQL*WSRPSP
Trigger: AGGGGACGGTCTGCTCCATCACAGCTGTGCCAGACA...AGCCAGTAAAGGCACCCCTAGCTCTTGGGATGTTTGTATCCAACTCCGGGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp ACAAGAAGCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATATAAACATGTCTCAGTaGTTGTCTCCGCCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: TRSPALPQPHGILRFRDHINMSQ*LSPPAA
Trigger: GGCTGCTGGCGGAGACAAGCACTGAGACATGTTTAT...ATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CTCCTTCGTGTGCCTCGCCGATGCCCTGCACTTTTCCTAGTGCACCCTCATCAGATAAACATGTCTCAGTaGTTGTCTCCGCCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: LLRVPRRCPALFLVHPHQINMSQ*LSPPAA
Trigger: GGCTGCTGGCGGAGACAAGCACTGAGACATGTTTAT...CTGATGAGGGTGCACTAGGAAAAGTGCAGGGCATCGGCGAGGCACACGAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CCTCCCATCCCACCACTGCCTGGGTTCAAGGGTCAGTGCTCAAGAGTCCCACATAACCTCATGGGATCCTaGGTTTCAGGGACCATGAGA +
Preference number: 2 (lower is better)
Translates to: PPIPPLPGFKGQCSRVPHNLMGS*VSGTMR
Trigger: TCTCATGGTCCCTGAAACGCAGGATCCCATGAGGTT...ATGTGGGACTCTTGAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGCGGTTTCCCAGAAGGCTGGGCTGGAGCTaGATGGGTATTTCATTGAAA +
Preference number: 2 (lower is better)
Translates to: ASPSHCAPELRDFLRFPRRLGWS*MGISLK
Trigger: TTTCAATGAAATACCCATGCAGCTCCAGCCCAGCCT...TCTGGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp ATCCTCTTCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCGGGTTCAAGGGTCAGTaGTCAAGAGTCCCACATGGT +
Preference number: 2 (lower is better)
Translates to: ILFQPRLVQEASGSNGASGFKGQ*SRVPHG
Trigger: ACCATGTGGGACTCTTGAGCACTGACCCTTGAACCC...GCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGAAGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CTACTTTCTTCCCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGTGCAAGCATCCGAAGTaGCCACAACCAGGCTGCCCA +
Preference number: 2 (lower is better)
Translates to: LLSSLPGITWKTPGHWGWCKHPK*PQPGCP
Trigger: TGGGCAGCCTGGTTGTGGGCACTTCGGATGCTTGCA...CCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGGGAAGAAAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp ATCCTCTTCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCCACAAAGTAGAAGGCTaGGCTGGAGCTGCATGGGTA +
Preference number: 2 (lower is better)
Translates to: ILFQPRLVQEASGSNGASHKVEG*AGAAWV
Trigger: TACCCATGCAGCTCCAGCCCAGCCTTCTACTTTGTG...GCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGAAGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp GAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGTTCCCATTCACTGTCTaGCACAGCTGTGATGGAGCA +
Preference number: 2 (lower is better)
Translates to: EDTWTLGLALAAPGTRSQFPFTV*HSCDGA
Trigger: TGCTCCATCACAGCTGTGCCAGACAGTGAATGGGAA...CTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp CCTCCCATCCCACCACTGCCTGGGTTCAAGGGTCAGTGCTCAAGAGTCCCACATAACATGGAAGACACCTaGACACTGGGGTTGGCCTTA +
Preference number: 2 (lower is better)
Translates to: PPIPPLPGFKGQCSRVPHNMEDT*TLGLAL
Trigger: TAAGGCCAACCCCAGTGTCCAGGTGTCTTCCATGTT...ATGTGGGACTCTTGAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp ATCCTCTTCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCCTCCCAGGCATAACATaGAAGACACCTGGACACTGG +
Preference number: 2 (lower is better)
Translates to: ILFQPRLVQEASGSNGASLPGIT*KTPGHW
Trigger: CCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAG...GCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGAAGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp AGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGAGAGAGGTAAAGGGGGCCAGCAGCCGTGCCTaGCGGGCCTTAGTAGTCGGT +
Preference number: 2 (lower is better)
Translates to: RPFSYFTAKEMGTREVKGASSRA*RALVVG
Trigger: ACCGACTACTAAGGCCCGCCAGGCACGGCTGCTGGC...CCCCTTTACCTCTCTCGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR-3UTR GCA 90 bp AGGGAGGATTGCAAAGCCTCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTAACCTCATGGGATCCTaGGTTTCAGGGACCATGAGA +
Preference number: 2 (lower is better)
Translates to: REDCKASRLLQALPGTQSNLMGS*VSGTMR
Trigger: TCTCATGGTCCCTGAAACGCAGGATCCCATGAGGTT...ACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGAGGCTTTGCAATCCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp TTCCTGCCCTTGGTACACAGCCCTCTCCACTGGGCTGTCCAAGTCAAGGGACAGATCGTCTCTGCCTGCTaGTTCCTTCCGAGTGAATTT +
Preference number: 2 (lower is better)
Translates to: FLPLVHSPLHWAVQVKGQIVSAC*FLPSEF
Trigger: AAATTCACTCGGAAGGAAGCAGCAGGCAGAGACGAT...CTGTCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp GAAGCCAGGGGCCTTTGTAGCCCCACATTGCCCGGAGTTGGATACAAACATCCCTTCCCATTCACTGTCTaGCACAGCTGTGATGGAGCA +
Preference number: 2 (lower is better)
Translates to: EARGLCSPTLPGVGYKHPFPFTV*HSCDGA
Trigger: TGCTCCATCACAGCTGTGCCAGACAGTGAATGGGAA...GGGATGTTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAGGCCCCTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp GAAGCCAGGGGCCTTTGTAGCCCCACATTGCCCGGAGTTGGATACAAACATCCCGGTGCCTTTACTGGCTaGAAGGTGACCGTTCCATTT +
Preference number: 2 (lower is better)
Translates to: EARGLCSPTLPGVGYKHPGAFTG*KVTVPF
Trigger: AAATGGAACGGTCACCTTCCAGCCAGTAAAGGCACC...GGGATGTTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAGGCCCCTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CAA 90 bp GGGACACAAAGTAGAAGGCTGGGCTGGAGCTGCATGGGTATTTCATaGAAAGTTCACAGACACAAGGGCTCTGAGCGGGGTCACATCGTG +
Preference number: 2 (lower is better)
Translates to: GTQSRRLGWSCMGIS*KVHRHKGSERGHIV
Trigger: CACGATGTGACCCCGCTCAGAGCCCTTGTGTCTGTGAACTTTCAATGAAATACCCATGCAGCTCCAGCCCAGCCTTCTACTTTGTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp AGTGAGTCCTCCCAACCTGGGACAATTTTGCATAAGCCCTTCCTGCTAGGTGTCGCTGTACTCAGCTTCTaGTGGCCTTGCTGCCCAGTT +
Preference number: 2 (lower is better)
Translates to: SESSQPGTILHKPFLLGVAVLSF*WPCCPV
Trigger: AACTGGGCAGCAAGGCCATCAGAAGCTGAGTACAGC...GACACCTAGCAGGAAGGGCTTATGCAAAATTGTCCCAGGTTGGGAGGACTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp ATTGCCCGGAGTTGGATACAAACATCCCAAGAGCTAGGGGTGCCTTTACTGGCTTCTGGGTCAGGACTGTaGCCAGAATCTTGCTCGCTG +
Preference number: 2 (lower is better)
Translates to: IARSWIQTSQELGVPLLASGSGL*PESCSL
Trigger: CAGCGAGCAAGATTCTGGTCACAGTCCTGACCCAGA...AGCCAGTAAAGGCACCCCTAGCTCTTGGGATGTTTGTATCCAACTCCGGGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp CTACTTTCTTCCCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGGGGTTCAAGGGTCAGTaGTCAAGAGTCCCACATGGT +
Preference number: 2 (lower is better)
Translates to: LLSSLPGITWKTPGHWGWGFKGQ*SRVPHG
Trigger: ACCATGTGGGACTCTTGAGCACTGACCCTTGAACCC...CCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGGGAAGAAAGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp GAAGCCAGGGGCCTTTGTAGCCCCACATTGCCCGGAGTTGGATACAAACATCCCCACATTGCCCGGAGTTaGATACAAACATCCCAAGAG +
Preference number: 2 (lower is better)
Translates to: EARGLCSPTLPGVGYKHPHIARS*IQTSQE
Trigger: CTCTTGGGATGTTTGTATCCAACTCCGGGCAATGTG...GGGATGTTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAGGCCCCTGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp GATTATAGAAGTGAAAGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGGCCAATGCAGGCAGCTaGGGCTGTGCCCCACCCCCT +
Preference number: 2 (lower is better)
Translates to: DYRSERPFSYFTAKEMGTANAGS*GCAPPP
Trigger: AGGGGGTGGGGCACAGCCTCAGCTGCCTGCATTGGC...CGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCTTTCACTTCTATAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp ATTGCCCGGAGTTGGATACAAACATCCCAAGAGCTAGGGGTGCCTTTACTGGCTGACTTCTCCAGGCCCTaGCAGGGACACAAAGTAGAA +
Preference number: 2 (lower is better)
Translates to: IARSWIQTSQELGVPLLADFSRP*QGHKVE
Trigger: TTCTACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTC...AGCCAGTAAAGGCACCCCTAGCTCTTGGGATGTTTGTATCCAACTCCGGGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp ATTGCCCGGAGTTGGATACAAACATCCCAAGAGCTAGGGGTGCCTTTACTGGCTTTCCCTGGGAAGGTTTaGCTGCCTTCCCACGGAATA +
Preference number: 2 (lower is better)
Translates to: IARSWIQTSQELGVPLLAFPGKV*LPSHGI
Trigger: TATTCCGTGGGAAGGCAGGCAAACCTTCCCAGGGAA...AGCCAGTAAAGGCACCCCTAGCTCTTGGGATGTTTGTATCCAACTCCGGGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp AATGTCAAATGTCTGCCAGGCACTGTGCAAAATCACATAAAAATGAGGTGGGAGTGCTCGCTGCACTCCTaGCACGGCTGTGCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: NVKCLPGTVQNHIKMRWECSLHS*HGCALS
Trigger: GGACAGGGCACAGCCGTGGCAGGAGTGCAGCGAGCA...CTCCCACCTCATTTTTATGTGATTTTGCACAGTGCCTGGCAGACATTTGACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp AGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGAGAGAGGTAAAGGGGGAAGCTCCACACCCATaGCCACTGCCTCGGCTTCTT +
Preference number: 2 (lower is better)
Translates to: RPFSYFTAKEMGTREVKGEAPHP*PLPRLL
Trigger: AAGAAGCCGAGGCAGTGGCCATGGGTGTGGAGCTTC...CCCCTTTACCTCTCTCGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp ATTGCCCGGAGTTGGATACAAACATCCCAAGAGCTAGGGGTGCCTTTACTGGCTCTCCCAGGCATAACATaGAAGACACCTGGACACTGG +
Preference number: 2 (lower is better)
Translates to: IARSWIQTSQELGVPLLALPGIT*KTPGHW
Trigger: CCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAG...AGCCAGTAAAGGCACCCCTAGCTCTTGGGATGTTTGTATCCAACTCCGGGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR TCA 90 bp AATGTCAAATGTCTGCCAGGCACTGTGCAAAATCACATAAAAATGAGGTGGGAGTGCTTGCCTGCCTGCTaGGGGCGAGAATGCACCTGC +
Preference number: 2 (lower is better)
Translates to: NVKCLPGTVQNHIKMRWECLPAC*GRECTC
Trigger: GCAGGTGCATTCTCGCCCTCAGCAGGCAGGCAAGCA...CTCCCACCTCATTTTTATGTGATTTTGCACAGTGCCTGGCAGACATTTGACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp TCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCATCCGAAATTTGTGGTTTCCTTTaGTCTGATTTGGCCAATGCA +
Preference number: 2 (lower is better)
Translates to: SSPGLSRKPLGLMVQASEICGFL*SDLANA
Trigger: TGCATTGGCCAAATCAGAGCAAAGGAAACCACAAAT...TTCGGATGCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GCTTCTCCCCCACCTTACCTTCCAAACCAGTCAACCCCACTGACTGCACAGCTGATTTGTGGTTTCCTTTaGTCTGATTTGGCCAATGCA +
Preference number: 2 (lower is better)
Translates to: ASPPPYLPNQSTPLTAQLICGFL*SDLANA
Trigger: TGCATTGGCCAAATCAGAGCAAAGGAAACCACAAAT...CAGCTGTGCAGTCAGTGGGGTTGACTGGTTTGGAAGGTAAGGTGGGGGAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp AATGTCAAATGTCTGCCAGGCACTGTGCAAAATCACATAAAAATGAGGTGGGAGACTGCGCACCTGAGCTaGGGGATTTCCTGCGGTTTC +
Preference number: 2 (lower is better)
Translates to: NVKCLPGTVQNHIKMRWETAHLS*GISCGF
Trigger: GAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGT...CTCCCACCTCATTTTTATGTGATTTTGCACAGTGCCTGGCAGACATTTGACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp AATGTCAAATGTCTGCCAGGCACTGTGCAAAATCACATAAAAATGAGGTGGGAGCACCCTCCCTTCCTCTaGAGGTTTCTGGGTCAGGAC +
Preference number: 2 (lower is better)
Translates to: NVKCLPGTVQNHIKMRWEHPPFL*RFLGQD
Trigger: GTCCTGACCCAGAAACCTGCAGAGGAAGGGAGGGTG...CTCCCACCTCATTTTTATGTGATTTTGCACAGTGCCTGGCAGACATTTGACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CCA 90 bp AGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGAGAGAGGTAAAGGGGTCCTTTGCTCTGATTTaGCCAATGCAGGCAGCTGAG +
Preference number: 2 (lower is better)
Translates to: RPFSYFTAKEMGTREVKGSFALI*PMQAAE
Trigger: CTCAGCTGCCTGCATTGGCCAAATCAGAGCAAAGGA...CCCCTTTACCTCTCTCGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp GATTATAGAAGTGAAAGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGGGCGTCTATCGTCTCTaGCTGCTGCTTCCTTCCGAG +
Preference number: 2 (lower is better)
Translates to: DYRSERPFSYFTAKEMGTGVYRL*LLLPSE
Trigger: CTCGGAAGGAAGCAGCAGGCAGAGACGATAGACGCC...CGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCTTTCACTTCTATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR GCA 90 bp ATTGCCCGGAGTTGGATACAAACATCCCAAGAGCTAGGGGTGCCTTTACTGGCTATTTGTGGTTTCCTTTaGTCTGATTTGGCCAATGCA +
Preference number: 2 (lower is better)
Translates to: IARSWIQTSQELGVPLLAICGFL*SDLANA
Trigger: TGCATTGGCCAAATCAGAGCAAAGGAAACCACAAAT...AGCCAGTAAAGGCACCCCTAGCTCTTGGGATGTTTGTATCCAACTCCGGGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR GCA 72 bp GGGGCGCGCCGGCAGCCCGCACGCTGTCGGTCTTGCTaGTCTTGGACTCCATGGGGAACAGTGTGGGCGCCA +
Preference number: 3 (lower is better)
Translates to: GARRQPARCRSC*SWTPWGTVWAP
Trigger: TGGCGCCCACACTGTTCCCCATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGCGGGCTGCCGGCGCGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR GCA 72 bp CAGGGGGCGCGCCGGCAGCCCGCACGCTGTCGGTCTTaGTGCTCTTGGACTCCATGGGGAACAGTGTGGGCG +
Preference number: 3 (lower is better)
Translates to: QGARRQPARCRS*CSWTPWGTVWA
Trigger: CGCCCACACTGTTCCCCATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGCGGGCTGCCGGCGCGCCCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR-3UTR CAA 90 bp GCAGTCTGTTGGGACACAGCACCCGGGGCCCTGACCGCCAGGCAGTTCCTGAGGGTCCCCTGCAGTCTGTaGGGACACAGCACCCGGGGC +
Preference number: 3 (lower is better)
Translates to: AVCWDTAPGALTARQFLRVPCSL*GHSTRG
Trigger: GCCCCGGGTGCTGTGTCCCAACAGACTGCAGGGGAC...CCTCAGGAACTGCCTGGCGGTCAGGGCCCCGGGTGCTGTGTCCCAACAGACTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR GCA 72 bp GTCGTGGGGTTGGTCATCGTCTTCTTCTCGGCTAGGTaGTTGCAGGCAGGGGGCGCGCCGGCAGCCCGCACG +
Preference number: 3 (lower is better)
Translates to: VVGLVIVFFSAR*LQAGGAPAART
Trigger: CGTGCGGGCTGCCGGCGCGCCCCCTGCCTGCAAGCACCTAGCCGAGAAGAAGACGATGACCAACCCCACGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR CCA 72 bp CTTGCCTGCCTGCTGAGGGCGAGAATGCACCTGCTGTaGGGGCCTGACCTCACCGTGGACACCCACCGCGGG +
Preference number: 3 (lower is better)
Translates to: LACLLRARMHLL*GPDLTVDTHRG
Trigger: CCCGCGGTGGGTGTCCACGGTGAGGTCAGGCCCCCACAGCAGGTGCATTCTCGCCCTCAGCAGGCAGGCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CCA 72 bp CGCCGGCAGCCCGCACGCTGTCGGTCTTGCTGCTCTTaGACTCCATGGGGAACAGTGTGGGCGCCATCGGGG +
Preference number: 3 (lower is better)
Translates to: RRQPARCRSCCS*TPWGTVWAPSG
Trigger: CCCCGATGGCGCCCACACTGTTCCCCATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGCGGGCTGCCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR-3UTR CAA 90 bp CTGCATCCTGCCTCCCACATTGTGGACTGCACATGCCATGGGCCGTCAGGGCGCTTCTCGGCTAGGTGCTaGCAGGCAGGGGGCGCGCCG +
Preference number: 3 (lower is better)
Translates to: LHPASHIVDCTCHGPSGRFSARC*QAGGAP
Trigger: CGGCGCGCCCCCTGCCTGCAAGCACCTAGCCGAGAA...GCGCCCTGACGGCCCATGGCATGTGCAGTCCACAATGTGGGAGGCAGGATGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR TCA 72 bp ACCAGCGCCGGAGCTGATGCCTGCTTGCCTGCCTGCTaGGGGCGAGAATGCACCTGCTGTGGGGGCCTGACC +
Preference number: 3 (lower is better)
Translates to: TSAGADACLPAC*GRECTCCGGLT
Trigger: GGTCAGGCCCCCACAGCAGGTGCATTCTCGCCCTCAGCAGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR GCA 72 bp TCCCACCATCCTCCAAGAGGCTCAATGACAGCTCCGTaGAGCCCCGCATCAGCCTCGCAGCCCGCCGCCTCC +
Preference number: 3 (lower is better)
Translates to: SHHPPRGSMTAP*SPASASQPAAS
Trigger: GGAGGCGGCGGGCTGCGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGGTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR GCA 72 bp TGGGGTTGGTCATCGTCTTCTTCTCGGCTAGGTGCTTaGAGGCAGGGGGCGCGCCGGCAGCCCGCACGCTGT +
Preference number: 3 (lower is better)
Translates to: WGWSSSSSRLGA*RQGARRQPARC
Trigger: ACAGCGTGCGGGCTGCCGGCGCGCCCCCTGCCTGCAAGCACCTAGCCGAGAAGAAGACGATGACCAACCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR CCA 72 bp CCCGCACGCTGTCGGTCTTGCTGCTCTTGGACTCCATaGGGAACAGTGTGGGCGCCATCGGGGGAGAGGCCG +
Preference number: 3 (lower is better)
Translates to: PARCRSCCSWTP*GTVWAPSGERP
Trigger: CGGCCTCTCCCCCGATGGCGCCCACACTGTTCCCCATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR-3UTR CAA 90 bp TGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCCTCGGCTTCTTCTGTCCCCTGCAGTCTGTaGGGACACAGCACCCGGGGC +
Preference number: 3 (lower is better)
Translates to: WAPTARSSTPMATASASSVPCSL*GHSTRG
Trigger: GCCCCGGGTGCTGTGTCCCAACAGACTGCAGGGGAC...AGAAGAAGCCGAGGCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR GCA 72 bp AGCCCATCCCTGCATCCTGCCTCCCACATTGTGGACTaGACATGCCATGGGCCGTCAGGGCGCTGGCCTCGG +
Preference number: 3 (lower is better)
Translates to: SPSLHPASHIVD*TCHGPSGRWPR
Trigger: CCGAGGCCAGCGCCCTGACGGCCCATGGCATGTGCAGTCCACAATGTGGGAGGCAGGATGCAGGGATGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp TTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCACAGCCGGGCCGTCTTaGCATCCTCCACGGCTCCAT +
Preference number: 3 (lower is better)
Translates to: FPDQLGTHSAKLHTHGHCTAGPS*HPPRLH
Trigger: ATGGAGCCGTGGAGGATGCAAAGACGGCCCGGCTGT...GCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR GCA 72 bp CGAAGCCAGAGACCAGCGCCGGAGCTGATGCCTGCTTaGCTGCCTGCTGAGGGCGAGAATGCACCTGCTGTG +
Preference number: 3 (lower is better)
Translates to: RSQRPAPELMPA*LPAEGENAPAV
Trigger: CACAGCAGGTGCATTCTCGCCCTCAGCAGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGTCTCTGGCTTCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CCA 72 bp CATGTCTCAGTGCTTGTCTCCGCCAGCAGCCGTGCCTaGCGGGCCTTAGTAGTCGGTGAGGGGGTACCGCAG +
Preference number: 3 (lower is better)
Translates to: HVSVLVSASSRA*RALVVGEGVPQ
Trigger: CTGCGGTACCCCCTCACCGACTACTAAGGCCCGCCAGGCACGGCTGCTGGCGGAGACAAGCACTGAGACATG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR TCA 72 bp CCTGGCACTTCTCCCACCATCCTCCAAGAGGCTCAATaGCAGCTCCGTGCAGCCCCGCATCAGCCTCGCAGC +
Preference number: 3 (lower is better)
Translates to: PGTSPTILQEAQ*QLRAAPHQPRS
Trigger: GCTGCGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGGTGGGAGAAGTGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR GCA 72 bp CCTCCCATCCCACCACTGCCTGGGTTCAAGGGTCAGTaGTCAAGAGTCCCACATGGTCCCCACCCTGTCCCC +
Preference number: 3 (lower is better)
Translates to: PPIPPLPGFKGQ*SRVPHGPHPVP
Trigger: GGGGACAGGGTGGGGACCATGTGGGACTCTTGAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CCA 72 bp GCATCCTGCCTCCCACATTGTGGACTGCACATGCCATaGGCCGTCAGGGCGCTGGCCTCGGCCTTTGAAAGG +
Preference number: 3 (lower is better)
Translates to: ASCLPHCGLHMP*AVRALASAFER
Trigger: CCTTTCAAAGGCCGAGGCCAGCGCCCTGACGGCCCATGGCATGTGCAGTCCACAATGTGGGAGGCAGGATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CCA 72 bp CCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATaGCCACTGCCTCGGCTTCTTCTCCATCTTCACCTC +
Preference number: 3 (lower is better)
Translates to: PAGHPQREAPHP*PLPRLLLHLHL
Trigger: GAGGTGAAGATGGAGAAGAAGCCGAGGCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp CGGTTTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCAATCCTGCCTCCCACATaGTGGACTGCACATGCCATG +
Preference number: 3 (lower is better)
Translates to: RFPRPAGHPQREAPHPWPILPPT*WTAHAM
Trigger: CATGGCATGTGCAGTCCACAATGTGGGAGGCAGGAT...TGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp TTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCATCCTGCCTCCCACATaGTGGACTGCACATGCCATG +
Preference number: 3 (lower is better)
Translates to: FPDQLGTHSAKLHTHGHCILPPT*WTAHAM
Trigger: CATGGCATGTGCAGTCCACAATGTGGGAGGCAGGAT...GCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp GTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAGTGCACCCTCATCAGCTaGTCTTCAGGGCTGACCGGC +
Preference number: 3 (lower is better)
Translates to: VSARLSAAPGTSPTILQECTLIS*SSGLTG
Trigger: GCCGGTCAGCCCTGAAGACAAGCTGATGAGGGTGCA...CTCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp CCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGCATGCACCCTCATCAGCTaGTCTTCAGGGCTGACCGGC +
Preference number: 3 (lower is better)
Translates to: PSSKRLNDSSVQPRISLACTLIS*SSGLTG
Trigger: GCCGGTCAGCCCTGAAGACAAGCTGATGAGGGTGCA...TGCGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp CCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGCACCCTGTCCCCTGCGTTaGTCCCATCTGCTGCTAGCT +
Preference number: 3 (lower is better)
Translates to: PSSKRLNDSSVQPRISLAPCPLR*SHLLLA
Trigger: AGCTAGCAGCAGATGGGACAAACGCAGGGGACAGGG...TGCGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp TTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCGCAGAACTGGTGATGTaGAACAGCCGGGCCGTCTTT +
Preference number: 3 (lower is better)
Translates to: FPDQLGTHSAKLHTHGHCAELVM*NSRAVF
Trigger: AAAGACGGCCCGGCTGTTCAACATCACCAGTTCTGC...GCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR CCA 72 bp TGCATCCACCTCTGTCCACTGGACTCCCCTCCAAGCTaGCCTCGCTACCCCAGAGGGCACGAGCTTCCCAAA +
Preference number: 3 (lower is better)
Translates to: CIHLCPLDSPPS*PRYPRGHELPK
Trigger: TTTGGGAAGCTCGTGCCCTCTGGGGTAGCGAGGCCAGCTTGGAGGGGAGTCCAGTGGACAGAGGTGGATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CCA 72 bp GCTGCCCACAGTCTCGGCAAGGCTTTCAGCCGCCCCTaGCACTTCTCCCACCATCCTCCAAGAGGCTCAATG +
Preference number: 3 (lower is better)
Translates to: AAHSLGKAFSRP*HFSHHPPRGSM
Trigger: CATTGAGCCTCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACTGTGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp CCACTTGCATCCACCTCTGTCCACTGGACTCCCCTCCAAGCTGGCCTCGCTACCAACATGTCTCAGTGCTaGTCTCCGCCAGCAGCCGTG +
Preference number: 3 (lower is better)
Translates to: PLASTSVHWTPLQAGLATNMSQC*SPPAAV
Trigger: CACGGCTGCTGGCGGAGACAAGCACTGAGACATGTT...GGTAGCGAGGCCAGCTTGGAGGGGAGTCCAGTGGACAGAGGTGGATGCAAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp CCATCTGCTGCTAGCTCAAGGTCCTCCCTTCTGAGGCACCCCACGTCTCCAGCCAACATGTCTCAGTGCTaGTCTCCGCCAGCAGCCGTG +
Preference number: 3 (lower is better)
Translates to: PSAASSRSSLLRHPTSPANMSQC*SPPAAV
Trigger: CACGGCTGCTGGCGGAGACAAGCACTGAGACATGTT...GGCTGGAGACGTGGGGTGCCTCAGAAGGGAGGACCTTGAGCTAGCAGCAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp GTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAGCTTCCCTGGGAAGGTTaGCCTGCCTTCCCACGGAAT +
Preference number: 3 (lower is better)
Translates to: VSARLSAAPGTSPTILQELPWEG*PAFPRN
Trigger: ATTCCGTGGGAAGGCAGGCAAACCTTCCCAGGGAAG...CTCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp TCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCCGCACGCTGTCGGTCTaGCTGCTCTTGGACTCCATG +
Preference number: 3 (lower is better)
Translates to: SRLLQALPGTQSRRLGWSRTLSV*LLLDSM
Trigger: CATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGCG...GCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR TCA 72 bp CCCTCCCTTCCTCTGCAGGTTTCTGGGTCAGGACTGTaGCCAGAATCTTGCTCGCTGCACTCCTGCCACGGC +
Preference number: 3 (lower is better)
Translates to: PSLPLQVSGSGL*PESCSLHSCHG
Trigger: GCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCTGACCCAGAAACCTGCAGAGGAAGGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR GCA 72 bp TGCCTGCCTTCCCACGGAATAGCAAGTCCTTCCCACTaGGCACCTGAGCTGCGGGATTTCCTGCGGTTTCCC +
Preference number: 3 (lower is better)
Translates to: CLPSHGIASPSH*APELRDFLRFP
Trigger: GGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGCTATTCCGTGGGAAGGCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR GCA 72 bp TTTCTGGGTCAGGACTGTGACCAGAATCTTGCTCGCTaGACTCCTGCCACGGCTGTGCCCTGTCCCCTGCGT +
Preference number: 3 (lower is better)
Translates to: FLGQDCDQNLAR*TPATAVPCPLR
Trigger: ACGCAGGGGACAGGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCTGACCCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CCA 72 bp CCTGGTTTCCTGCCCTTGGTACACAGCCCTCTCCACTaGGCTGTCCAAGTCAAGGGACAGGAATCCTCCGGG +
Preference number: 3 (lower is better)
Translates to: PGFLPLVHSPLH*AVQVKGQESSG
Trigger: CCCGGAGGATTCCTGTCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAAACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp CCCATGACTGTGCCTGAGTTCCAAGGGGACAGAGCCCATCCCTGCATCCTGCCTAACATGTCTCAGTGCTaGTCTCCGCCAGCAGCCGTG +
Preference number: 3 (lower is better)
Translates to: PMTVPEFQGDRAHPCILPNMSQC*SPPAAV
Trigger: CACGGCTGCTGGCGGAGACAAGCACTGAGACATGTT...AGGCAGGATGCAGGGATGGGCTCTGTCCCCTTGGAACTCAGGCACAGTCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp CACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGCCTGCTTGCCTGCCTATCCTGCCTCCCACATaGTGGACTGCACATGCCATG +
Preference number: 3 (lower is better)
Translates to: HRLRSQRPAPELMPACLPILPPT*WTAHAM
Trigger: CATGGCATGTGCAGTCCACAATGTGGGAGGCAGGAT...AGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp TTCCTGCCCTTGGTACACAGCCCTCTCCACTGGGCTGTCCAAGTCAAGGGACAGTGCACCCTCATCAGCTaGTCTTCAGGGCTGACCGGC +
Preference number: 3 (lower is better)
Translates to: FLPLVHSPLHWAVQVKGQCTLIS*SSGLTG
Trigger: GCCGGTCAGCCCTGAAGACAAGCTGATGAGGGTGCA...CTGTCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp CTTCTGAGGCACCCCACGTCTCCAGCCCAGAAGGCTCTTCCCTTCTCTGCTTGGCTTCCCTGGGAAGGTTaGCCTGCCTTCCCACGGAAT +
Preference number: 3 (lower is better)
Translates to: LLRHPTSPAQKALPFSAWLPWEG*PAFPRN
Trigger: ATTCCGTGGGAAGGCAGGCAAACCTTCCCAGGGAAG...CCAAGCAGAGAAGGGAAGAGCCTTCTGGGCTGGAGACGTGGGGTGCCTCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp GAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGCCTGGTTTCCTGCCCTaGGTACACAGCCCTCTCCAC +
Preference number: 3 (lower is better)
Translates to: EDTWTLGLALAAPGTRSQPGFLP*VHSPLH
Trigger: GTGGAGAGGGCTGTGTACCAAGGGCAGGAAACCAGG...CTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp TTCCTGCCCTTGGTACACAGCCCTCTCCACTGGGCTGTCCAAGTCAAGGGACAGCCCTGTCCCCTGCGTTaGTCCCATCTGCTGCTAGCT +
Preference number: 3 (lower is better)
Translates to: FLPLVHSPLHWAVQVKGQPCPLR*SHLLLA
Trigger: AGCTAGCAGCAGATGGGACAAACGCAGGGGACAGGG...CTGTCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp CACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGCCTGCTTGCCTGCCTATGACGGTCGTGGGGTaGGTCATCGTCTTCTTCTCG +
Preference number: 3 (lower is better)
Translates to: HRLRSQRPAPELMPACLPMTVVG*VIVFFS
Trigger: CGAGAAGAAGACGATGACCAACCCCACGACCGTCAT...AGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR TCA 72 bp TTCCCACGGAATAGCAAGTCCTTCCCACTGCGCACCTaGGCTGCGGGATTTCCTGCGGTTTCCCAGACCAGC +
Preference number: 3 (lower is better)
Translates to: FPRNSKSFPLRT*AAGFPAVSQTS
Trigger: GCTGGTCTGGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGCTATTCCGTGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR TCA 72 bp AGTCGTTCACCTCGGTGGTGTCCGGGTAGACCTCGATaGCGGTCGTGGGGTTGGTCATCGTCTTCTTCTCGG +
Preference number: 3 (lower is better)
Translates to: SRSPRWCPGRPR*RSWGWSSSSSR
Trigger: CCGAGAAGAAGACGATGACCAACCCCACGACCGTCATCGAGGTCTACCCGGACACCACCGAGGTGAACGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR-3UTR CAA 90 bp CCTCCCATCCCACCACTGCCTGGGTTCAAGGGTCAGTGCTCAAGAGTCCCACATCTCAGCTCCCTCCACTaGCATCCACCTCTGTCCACT +
Preference number: 3 (lower is better)
Translates to: PPIPPLPGFKGQCSRVPHLSSLH*HPPLST
Trigger: AGTGGACAGAGGTGGATGCAAGTGGAGGGAGCTGAG...ATGTGGGACTCTTGAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp GAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGCTCAGCTCCCTCCACTaGCATCCACCTCTGTCCACT +
Preference number: 3 (lower is better)
Translates to: EDTWTLGLALAAPGTRSQLSSLH*HPPLST
Trigger: AGTGGACAGAGGTGGATGCAAGTGGAGGGAGCTGAG...CTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp CGGTTTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCATCATTGAGAAGCTTCTaGTCTCGCACTTTGAGGGAG +
Preference number: 3 (lower is better)
Translates to: RFPRPAGHPQREAPHPWPSLRSF*SRTLRE
Trigger: CTCCCTCAAAGTGCGAGACAAGAAGCTTCTCAATGA...TGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAAACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR-3UTR CAA 90 bp GCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCTGCATGGGTATTTCACAGCTTCTGATGGCCTaGCTGCCCAGTTCACAGCTC +
Preference number: 3 (lower is better)
Translates to: ALPGTQSRRLGWSCMGISQLLMA*LPSSQL
Trigger: GAGCTGTGAACTGGGCAGCAAGGCCATCAGAAGCTG...TGAAATACCCATGCAGCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp CTTCTGAGGCACCCCACGTCTCCAGCCCAGAAGGCTCTTCCCTTCTCTGCTTGGAAGCTCACTGCCCCCTaGCTGTACTCAGCTTCTGAT +
Preference number: 3 (lower is better)
Translates to: LLRHPTSPAQKALPFSAWKLTAP*LYSASD
Trigger: ATCAGAAGCTGAGTACAGCAAGGGGGCAGTGAGCTT...CCAAGCAGAGAAGGGAAGAGCCTTCTGGGCTGGAGACGTGGGGTGCCTCAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp AGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAAAGCTCACTGCCCCCTaGCTGTACTCAGCTTCTGAT +
Preference number: 3 (lower is better)
Translates to: SLGKAFSRPWHFSHHPPRKLTAP*LYSASD
Trigger: ATCAGAAGCTGAGTACAGCAAGGGGGCAGTGAGCTT...TCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp ACGGCTGTGCCCTGTCCCCTGCGTTTGTCCCATCTGCTGCTAGCTCAAGGTCCTGTTCCTGAGGGAGGATaGCAAAGCCTCCAGACTTCT +
Preference number: 3 (lower is better)
Translates to: TAVPCPLRLSHLLLAQGPVPEGG*QSLQTS
Trigger: AGAAGTCTGGAGGCTTTGCAATCCTCCCTCAGGAAC...AGGACCTTGAGCTAGCAGCAGATGGGACAAACGCAGGGGACAGGGCACAGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp CACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGCCTGCTTGCCTGCCTCTAAGTGACTCGAGTTaGGGGTACCTCCACCAAATG +
Preference number: 3 (lower is better)
Translates to: HRLRSQRPAPELMPACLPLSDSS*GYLHQM
Trigger: CATTTGGTGGAGGTACCCCAAACTCGAGTCACTTAG...AGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp TCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCATCCGAACGCTGGCCTCGGCCTTaGAAAGGCATCTTCCGTTCA +
Preference number: 3 (lower is better)
Translates to: SSPGLSRKPLGLMVQASERWPRP*KGIFRS
Trigger: TGAACGGAAGATGCCTTTCAAAGGCCGAGGCCAGCG...TTCGGATGCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp GTGCAGTGGACAGGGAGCGCCAGCAGGTCAGGCATGAGTACAGACAGGCAAAGAACTGTGACCAGAATCTaGCTCGCTGCACTCCTGCCA +
Preference number: 3 (lower is better)
Translates to: VQWTGSASRSGMSTDRQRTVTRI*LAALLP
Trigger: TGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGT...TCTTTGCCTGTCTGTACTCATGCCTGACCTGCTGGCGCTCCCTGTCCACTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp CACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGCCTGCTTGCCTGCCTCTTTGTAGCCCCACATaGCCCGGAGTTGGATACAAA +
Preference number: 3 (lower is better)
Translates to: HRLRSQRPAPELMPACLPLCSPT*PGVGYK
Trigger: TTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAG...AGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR GCA 72 bp TGCGTTTCAGGGACCATGAGAATAAACATGTCTCAGTaGTTGTCTCCGCCAGCAGCCGTGCCTGGCGGGCCT +
Preference number: 3 (lower is better)
Translates to: CVSGTMRINMSQ*LSPPAAVPGGP
Trigger: AGGCCCGCCAGGCACGGCTGCTGGCGGAGACAAGCACTGAGACATGTTTATTCTCATGGTCCCTGAAACGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR-3UTR CAA 90 bp GTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAGCAACCTGGGACAATTTaGCATAAGCCCTTCCTGCTA +
Preference number: 3 (lower is better)
Translates to: VSARLSAAPGTSPTILQEQPGTI*HKPFLL
Trigger: TAGCAGGAAGGGCTTATGCAAAATTGTCCCAGGTTG...CTCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp AGCTTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCCTAAGTGACTCGAGTTaGGGGTACCTCCACCAAATG +
Preference number: 3 (lower is better)
Translates to: SFPKHEAHGHAPSLGRFALSDSS*GYLHQM
Trigger: CATTTGGTGGAGGTACCCCAAACTCGAGTCACTTAG...GGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR TCA 72 bp GGGTATTTCATTGAAAGTTCACAGACACAAGGGCTCTaGGCGGGGTCACATCGTGGAGGAGGCAGGGTCGGG +
Preference number: 3 (lower is better)
Translates to: GYFIESSQTQGL*AGSHRGGGRVG
Trigger: CCCGACCCTGCCTCCTCCACGATGTGACCCCGCTCAGAGCCCTTGTGTCTGTGAACTTTCAATGAAATACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp GCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCTGCATGGGTATTTCAAAGCTCACTGCCCCCTaGCTGTACTCAGCTTCTGAT +
Preference number: 3 (lower is better)
Translates to: ALPGTQSRRLGWSCMGISKLTAP*LYSASD
Trigger: ATCAGAAGCTGAGTACAGCAAGGGGGCAGTGAGCTT...TGAAATACCCATGCAGCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp TCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCCAACCTGGGACAATTTaGCATAAGCCCTTCCTGCTA +
Preference number: 3 (lower is better)
Translates to: SRLLQALPGTQSRRLGWSQPGTI*HKPFLL
Trigger: TAGCAGGAAGGGCTTATGCAAAATTGTCCCAGGTTG...GCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp GTGCAGTGGACAGGGAGCGCCAGCAGGTCAGGCATGAGTACAGACAGGCAAAGACCACATTGCCCGGAGTaGGATACAAACATCCCAAGA +
Preference number: 3 (lower is better)
Translates to: VQWTGSASRSGMSTDRQRPHCPE*DTNIPR
Trigger: TCTTGGGATGTTTGTATCCAACTCCGGGCAATGTGG...TCTTTGCCTGTCTGTACTCATGCCTGACCTGCTGGCGCTCCCTGTCCACTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp ACAAGAAGCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATGCTCCATTCAGGTCATaGAGAAGCTTCTTGTCTCGC +
Preference number: 3 (lower is better)
Translates to: TRSPALPQPHGILRFRDHAPFRS*RSFLSR
Trigger: GCGAGACAAGAAGCTTCTCAATGACCTGAATGGAGC...ATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR GCA 72 bp AGGGTATGGAAGCCAGGGGCCTTTGTAGCCCCACATTaGCCGGAGTTGGATACAAACATCCCAAGAGCTAGG +
Preference number: 3 (lower is better)
Translates to: RVWKPGAFVAPH*PELDTNIPRAR
Trigger: CCTAGCTCTTGGGATGTTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAGGCCCCTGGCTTCCATACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR GCA 72 bp GGCAGAACTGGTGATGTTGAACAGCCGGGCCGTCTTTaGATCCTCCACGGCTCCATTCAGGTCATTGAGAAG +
Preference number: 3 (lower is better)
Translates to: GRTGDVEQPGRL*ILHGSIQVIEK
Trigger: CTTCTCAATGACCTGAATGGAGCCGTGGAGGATGCAAAGACGGCCCGGCTGTTCAACATCACCAGTTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR CCA 72 bp ACTTTCTTCCCTCCCAGGCATAACATGGAAGACACCTaGACACTGGGGTTGGCCTTAGCTGCCCCAGGAACT +
Preference number: 3 (lower is better)
Translates to: TFFPPRHNMEDT*TLGLALAAPGT
Trigger: AGTTCCTGGGGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGGGAAGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CCA 72 bp CTGCCAGGCACTGTGCAAAATCACATAAAAATGAGGTaGGAGGAGTGCAGTGGACAGGGAGCGCCAGCAGGT +
Preference number: 3 (lower is better)
Translates to: LPGTVQNHIKMR*EECSGQGAPAG
Trigger: ACCTGCTGGCGCTCCCTGTCCACTGCACTCCTCCCACCTCATTTTTATGTGATTTTGCACAGTGCCTGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp AGTGAGTCCTCCCAACCTGGGACAATTTTGCATAAGCCCTTCCTGCTAGGTGTCCAGCTTCTGATGGCCTaGCTGCCCAGTTCACAGCTC +
Preference number: 3 (lower is better)
Translates to: SESSQPGTILHKPFLLGVQLLMA*LPSSQL
Trigger: GAGCTGTGAACTGGGCAGCAAGGCCATCAGAAGCTG...GACACCTAGCAGGAAGGGCTTATGCAAAATTGTCCCAGGTTGGGAGGACTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp TTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGGACCCTCTCTCTTCCAAGGCCCAACCTGGGACAATTTaGCATAAGCCCTTCCTGCTA +
Preference number: 3 (lower is better)
Translates to: LALAAPGTRSQDPLSSKAQPGTI*HKPFLL
Trigger: TAGCAGGAAGGGCTTATGCAAAATTGTCCCAGGTTG...GGCCTTGGAAGAGAGAGGGTCCTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp CTACTTTCTTCCCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGACTGTGACCAGAATCTaGCTCGCTGCACTCCTGCCA +
Preference number: 3 (lower is better)
Translates to: LLSSLPGITWKTPGHWGWTVTRI*LAALLP
Trigger: TGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGT...CCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGGGAAGAAAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR GCA 72 bp CAAGAAGCCCTGCCCTGCCCCAACCTCATGGGATCCTaGGTTTCAGGGACCATGAGAATAAACATGTCTCAG +
Preference number: 3 (lower is better)
Translates to: QEALPCPNLMGS*VSGTMRINMSQ
Trigger: CTGAGACATGTTTATTCTCATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CCA 72 bp CAGGCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTaGAGCTGCATGGGTATTTCATTGAAAGTTCACAGA +
Preference number: 3 (lower is better)
Translates to: QALPGTQSRRLG*SCMGISLKVHR
Trigger: TCTGTGAACTTTCAATGAAATACCCATGCAGCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp AGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGAGAGAGGTAAAGGGGTCGGTCTTGCTGCTCTaGGACTCCATGGGGAACAGT +
Preference number: 3 (lower is better)
Translates to: RPFSYFTAKEMGTREVKGSVLLL*DSMGNS
Trigger: ACTGTTCCCCATGGAGTCCAAGAGCAGCAAGACCGA...CCCCTTTACCTCTCTCGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR CCA 72 bp ACAAACATCCCAAGAGCTAGGGGTGCCTTTACTGGCTaGAAGGTGACCGTTCCATTTCCCCAACATGAACTC +
Preference number: 3 (lower is better)
Translates to: TNIPRARGAFTG*KVTVPFPQHEL
Trigger: GAGTTCATGTTGGGGAAATGGAACGGTCACCTTCCAGCCAGTAAAGGCACCCCTAGCTCTTGGGATGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR-3UTR CAA 90 bp GATTATAGAAGTGAAAGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGGTTCCTGAGGGAGGATaGCAAAGCCTCCAGACTTCT +
Preference number: 3 (lower is better)
Translates to: DYRSERPFSYFTAKEMGTVPEGG*QSLQTS
Trigger: AGAAGTCTGGAGGCTTTGCAATCCTCCCTCAGGAAC...CGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCTTTCACTTCTATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CAA 72 bp GCAGGGGGCGCGCCGGCAGCCCGCACGCTGTCGGTCTaGCTGCTCTTGGACTCCATGGGGAACAGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: AGGAPAARTLSV*LLLDSMGNSVG
Trigger: GCCCACACTGTTCCCCATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGCGGGCTGCCGGCGCGCCCCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382123.1
CDS-3UTR CCA 90 bp GGGCAGGGACACAGACGCTGGAAGCCAGGGTGCAGCAGCGAGGGGAGAAGCCCCAAGCGAAGCAGCCCTTaGGCGAACCTGCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GQGHRRWKPGCSSEGRSPKRSSP*ANLPGA
Trigger: GGCCCCCGGCAGGTTCGCCCAAGGGCTGCTTCGCTT...GGGGCTTCTCCCCTCGCTGCTGCACCCTGGCTTCCAGCGTCTGTGTCCCTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR TCA 90 bp CGCGCCGGCAGCCCGCACGCTGTCGGTCTTGCTGCTCTTGGACTCCATGGGGAAGCCAATGCAGGCAGCTaGGGCTGTGCCCCACCCCCT +
Preference number: 4 (lower is better)
Translates to: RAGSPHAVGLAALGLHGEANAGS*GCAPPP
Trigger: AGGGGGTGGGGCACAGCCTCAGCTGCCTGCATTGGC...TTCCCCATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGCGGGCTGCCGGCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382123.1
CDS-3UTR GCA 90 bp GGGCAGGGACACAGACGCTGGAAGCCAGGGTGCAGCAGCGAGGGGAGAAGCCCCTGCTCGCTGCACTCCTaGCACGGCTGTGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GQGHRRWKPGCSSEGRSPCSLHS*HGCALS
Trigger: GGACAGGGCACAGCCGTGGCAGGAGTGCAGCGAGCA...GGGGCTTCTCCCCTCGCTGCTGCACCCTGGCTTCCAGCGTCTGTGTCCCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CGCGCCGGCAGCCCGCACGCTGTCGGTCTTGCTGCTCTTGGACTCCATGGGGAAAGGCCCACGGGCAGGTaGTGGCCACCCTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RAGSPHAVGLAALGLHGERPTGR*WPPSLP
Trigger: AGGAAGGGAGGGTGGCCAGCACCTGCCCGTGGGCCT...TTCCCCATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGCGGGCTGCCGGCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382123.1
CDS-3UTR CCA 90 bp GGGCAGGGACACAGACGCTGGAAGCCAGGGTGCAGCAGCGAGGGGAGAAGCCCCAGCGGGGTCACATCGTaGAGGAGGCAGGGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: GQGHRRWKPGCSSEGRSPSGVTS*RRQGRG
Trigger: TCCCCGACCCTGCCTCCTCCACGATGTGACCCCGCT...GGGGCTTCTCCCCTCGCTGCTGCACCCTGGCTTCCAGCGTCTGTGTCCCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CAA 72 bp GCGCCGGCAGCCCGCACGCTGTCGGTCTTGCTGCTCTaGGACTCCATGGGGAACAGTGTGGGCGCCATCGGG +
Preference number: 4 (lower is better)
Translates to: APAARTLSVLLL*DSMGNSVGAIG
Trigger: CCCGATGGCGCCCACACTGTTCCCCATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGCGGGCTGCCGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382123.1
3UTR CAA 72 bp GTGGGGTTGGTCATCGTCTTCTTCTCGGCTAGGTGCTaGCAGGCAGGGGGCGCGCCGGCAGCCCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: VGLVIVFFSARC*QAGGAPAARTL
Trigger: CAGCGTGCGGGCTGCCGGCGCGCCCCCTGCCTGCAAGCACCTAGCCGAGAAGAAGACGATGACCAACCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382123.1
CDS-3UTR GCA 90 bp ATGGAGCAGACCGTCCCCTGCAGTCTGTTGGGACACAGCACCCGGGGCCCTGACCCCTCCATCCACCTCTaGCTGGGCTGCACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: MEQTVPCSLLGHSTRGPDPSIHL*LGCTPG
Trigger: GCCTGGGGTGCAGCCCAGGCAGAGGTGGATGGAGGG...GTCAGGGCCCCGGGTGCTGTGTCCCAACAGACTGCAGGGGACGGTCTGCTCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CTGCATCCTGCCTCCCACATTGTGGACTGCACATGCCATGGGCCGTCAGGGCGCCAGCCCGCCGCCTCCTaGCCTCCCATCCCACCACTG +
Preference number: 4 (lower is better)
Translates to: LHPASHIVDCTCHGPSGRQPAAS*PPIPPL
Trigger: CAGTGGTGGGATGGGAGGGCAGGAGGCGGCGGGCTG...GCGCCCTGACGGCCCATGGCATGTGCAGTCCACAATGTGGGAGGCAGGATGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGCACCCCCTGAGCCTCGGTaGGCGCGTCCTTCCGCCGTC +
Preference number: 4 (lower is better)
Translates to: PSSKRLNDSSVQPRISLAPPEPR*ARPSAV
Trigger: GACGGCGGAAGGACGCGCGCACCGAGGCTCAGGGGG...TGCGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382123.1
CDS-3UTR CCA 90 bp CGGTTTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCAAAGCGAAGCAGCCCTTaGGCGAACCTGCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: RFPRPAGHPQREAPHPWPKRSSP*ANLPGA
Trigger: GGCCCCCGGCAGGTTCGCCCAAGGGCTGCTTCGCTT...TGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAAACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR TCA 90 bp GCCCACAGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTAAGTCCCCCGGAAGCTaGGGATGCATGGCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: AHSLGKAFSRPWHFSHHPKSPGS*GCMAAP
Trigger: GGGGGCCGCCATGCATCCTCAGCTTCCGGGGGACTT...AGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACTGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR TCA 90 bp CCACTTGCATCCACCTCTGTCCACTGGACTCCCCTCCAAGCTGGCCTCGCTACCGCGGAGGGGGTGGACTaGGGGCCAAGCTCACTGCCC +
Preference number: 4 (lower is better)
Translates to: PLASTSVHWTPLQAGLATAEGVD*GPSSLP
Trigger: GGGCAGTGAGCTTGGCCCTCAGTCCACCCCCTCCGC...GGTAGCGAGGCCAGCTTGGAGGGGAGTCCAGTGGACAGAGGTGGATGCAAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp CTGCATCCTGCCTCCCACATTGTGGACTGCACATGCCATGGGCCGTCAGGGCGCGCCAATGCAGGCAGCTaGGGCTGTGCCCCACCCCCT +
Preference number: 4 (lower is better)
Translates to: LHPASHIVDCTCHGPSGRANAGS*GCAPPP
Trigger: AGGGGGTGGGGCACAGCCTCAGCTGCCTGCATTGGC...GCGCCCTGACGGCCCATGGCATGTGCAGTCCACAATGTGGGAGGCAGGATGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GGGCAGGGACACAGACGCTGGAAGCCAGGGTGCAGCAGCGAGGGGAGAAGCCCCGCAAGTCCTTCCCACTaGGCACCTGAGCTGCGGGAT +
Preference number: 4 (lower is better)
Translates to: GQGHRRWKPGCSSEGRSPASPSH*APELRD
Trigger: ATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC...GGGGCTTCTCCCCTCGCTGCTGCACCCTGGCTTCCAGCGTCTGTGTCCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CTGCATCCTGCCTCCCACATTGTGGACTGCACATGCCATGGGCCGTCAGGGCGCAGGCCCACGGGCAGGTaGTGGCCACCCTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LHPASHIVDCTCHGPSGRRPTGR*WPPSLP
Trigger: AGGAAGGGAGGGTGGCCAGCACCTGCCCGTGGGCCT...GCGCCCTGACGGCCCATGGCATGTGCAGTCCACAATGTGGGAGGCAGGATGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp TGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCCTCGGCTTCTTCTCCCACGGGCAGGTGCTaGCCACCCTCCCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: WAPTARSSTPMATASASSPTGRC*PPSLPL
Trigger: CAGAGGAAGGGAGGGTGGCCAGCACCTGCCCGTGGG...AGAAGAAGCCGAGGCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CGCACGCTGTCGGTCTTGCTGCTCTTGGACTCCATGGGGAACAGTGTGGGCGCCCCCACGGGCAGGTGCTaGCCACCCTCCCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RTLSVLLLLDSMGNSVGAPTGRC*PPSLPL
Trigger: CAGAGGAAGGGAGGGTGGCCAGCACCTGCCCGTGGG...GGCGCCCACACTGTTCCCCATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382123.1
CDS-3UTR TCA 90 bp ATGGAGCAGACCGTCCCCTGCAGTCTGTTGGGACACAGCACCCGGGGCCCTGACGCCTCCAGCTCCCACTaGGCCTCGACCCTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: MEQTVPCSLLGHSTRGPDASSSH*ASTLSK
Trigger: TTTGGAGAGGGTCGAGGCTCAGTGGGAGCTGGAGGC...GTCAGGGCCCCGGGTGCTGTGTCCCAACAGACTGCAGGGGACGGTCTGCTCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340134.5
CDS-3UTR TCA 90 bp GGTCAGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCGACCAGCGCCGGAGCTaGTGCCTGCTTGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GQDCDQNLARCTPATAVPDQRRS*CLLACL
Trigger: CAGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGTC...GGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCTGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp GTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAGGACCAGCGCCGGAGCTaGTGCCTGCTTGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VSARLSAAPGTSPTILQEDQRRS*CLLACL
Trigger: CAGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGTC...CTCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp CTTCTGAGGCACCCCACGTCTCCAGCCCAGAAGGCTCTTCCCTTCTCTGCTTGGCCGCTGTCTGTCCACTaGTCCGCCTCCCAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: LLRHPTSPAQKALPFSAWPLSVH*SASQRP
Trigger: GGGCCGCTGGGAGGCGGATCAGTGGACAGACAGCGG...CCAAGCAGAGAAGGGAAGAGCCTTCTGGGCTGGAGACGTGGGGTGCCTCAGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382123.1
CDS-3UTR GCA 90 bp GTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAGGCCCTTGGGCGAACCTaGCGGGGGCCTCGGAATCCA +
Preference number: 4 (lower is better)
Translates to: VSARLSAAPGTSPTILQEALGRT*RGPRNP
Trigger: TGGATTCCGAGGCCCCCGGCAGGTTCGCCCAAGGGC...CTCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR GCA 90 bp AGCTTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCCAGCCCGCCGCCTCCTaGCCTCCCATCCCACCACTG +
Preference number: 4 (lower is better)
Translates to: SFPKHEAHGHAPSLGRFAQPAAS*PPIPPL
Trigger: CAGTGGTGGGATGGGAGGGCAGGAGGCGGCGGGCTG...GGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp GCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATGAGAATACCTGGGCGCCGTCCGTaGTGCTGGCCGGGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: ALPCPNLMGSCVSGTMRIPGRRP*CWPGLP
Trigger: TGGGAGACCCGGCCAGCACCACGGACGGCGCCCAGG...TATTCTCATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CCA 90 bp CTGCATCCTGCCTCCCACATTGTGGACTGCACATGCCATGGGCCGTCAGGGCGCGCAGGGCAGGGGGCTTaGACACGCAAGCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LHPASHIVDCTCHGPSGRAGQGA*TRKRSS
Trigger: GCTGCTTCGCTTGCGTGTCCAAGCCCCCTGCCCTGC...GCGCCCTGACGGCCCATGGCATGTGCAGTCCACAATGTGGGAGGCAGGATGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CCA 90 bp TGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCCTCGGCTTCTTCTAGGAGGCGGAGGGGGTaGACTGAGGGCCAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: WAPTARSSTPMATASASSRRRRG*TEGQAH
Trigger: GTGAGCTTGGCCCTCAGTCCACCCCCTCCGCCTCCT...AGAAGAAGCCGAGGCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CGGTTTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACAGGGACACAGACGCTaGAAGCCAGGGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RFPRPAGHPQREAPHPWPQGHRR*KPGCSS
Trigger: GCTGCTGCACCCTGGCTTCCAGCGTCTGTGTCCCTG...TGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAAACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp GGGCAGGGACACAGACGCTGGAAGCCAGGGTGCAGCAGCGAGGGGAGAAGCCCCCACAGCCCTCTCCACTaGGCTGTCCAAGTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: GQGHRRWKPGCSSEGRSPHSPLH*AVQVKG
Trigger: TCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTG...GGGGCTTCTCCCCTCGCTGCTGCACCCTGGCTTCCAGCGTCTGTGTCCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp CTTCTGAGGCACCCCACGTCTCCAGCCCAGAAGGCTCTTCCCTTCTCTGCTTGGAAGTCCCCCGGAAGCTaGGGATGCATGGCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LLRHPTSPAQKALPFSAWKSPGS*GCMAAP
Trigger: GGGGGCCGCCATGCATCCTCAGCTTCCGGGGGACTT...CCAAGCAGAGAAGGGAAGAGCCTTCTGGGCTGGAGACGTGGGGTGCCTCAGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR TCA 90 bp CGGTTTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACCGCCAGGCAGTTCCTaGGGGAGGATTGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: RFPRPAGHPQREAPHPWPPPGSS*GRIAKP
Trigger: AGGCTTTGCAATCCTCCCTCAGGAACTGCCTGGCGG...TGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAAACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp ACGGCTGTGCCCTGTCCCCTGCGTTTGTCCCATCTGCTGCTAGCTCAAGGTCCTGCCAATGCAGGCAGCTaGGGCTGTGCCCCACCCCCT +
Preference number: 4 (lower is better)
Translates to: TAVPCPLRLSHLLLAQGPANAGS*GCAPPP
Trigger: AGGGGGTGGGGCACAGCCTCAGCTGCCTGCATTGGC...AGGACCTTGAGCTAGCAGCAGATGGGACAAACGCAGGGGACAGGGCACAGCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp TGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCCTCGGCTTCTTCTTTCCCACTGCGCACCTaGGCTGCGGGATTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: WAPTARSSTPMATASASSFPLRT*AAGFPA
Trigger: CGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAA...AGAAGAAGCCGAGGCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp CTGCATCCTGCCTCCCACATTGTGGACTGCACATGCCATGGGCCGTCAGGGCGCTTCCCACTGCGCACCTaGGCTGCGGGATTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: LHPASHIVDCTCHGPSGRFPLRT*AAGFPA
Trigger: CGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAA...GCGCCCTGACGGCCCATGGCATGTGCAGTCCACAATGTGGGAGGCAGGATGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp ATGGAGCAGACCGTCCCCTGCAGTCTGTTGGGACACAGCACCCGGGGCCCTGACACCAGTCAACCCCACTaGCTGCACAGCTGCCACGCA +
Preference number: 4 (lower is better)
Translates to: MEQTVPCSLLGHSTRGPDTSQPH*LHSCHA
Trigger: TGCGTGGCAGCTGTGCAGTCAGTGGGGTTGACTGGT...GTCAGGGCCCCGGGTGCTGTGTCCCAACAGACTGCAGGGGACGGTCTGCTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp CTGCATCCTGCCTCCCACATTGTGGACTGCACATGCCATGGGCCGTCAGGGCGCCTCCAAGAGGCTCAATaGCAGCTCCGTGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: LHPASHIVDCTCHGPSGRLQEAQ*QLRAAP
Trigger: CGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAG...GCGCCCTGACGGCCCATGGCATGTGCAGTCCACAATGTGGGAGGCAGGATGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp TGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCCTCGGCTTCTTCTCTCCAAGAGGCTCAATaGCAGCTCCGTGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: WAPTARSSTPMATASASSLQEAQ*QLRAAP
Trigger: CGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAG...AGAAGAAGCCGAGGCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp ACAAGAAGCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATTCTCGGCTAGGTGCTTaGAGGCAGGGGGCGCGCCGG +
Preference number: 4 (lower is better)
Translates to: TRSPALPQPHGILRFRDHSRLGA*RQGARR
Trigger: CCGGCGCGCCCCCTGCCTGCAAGCACCTAGCCGAGA...ATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR GCA 90 bp CGGTTTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACAAGAAGCCCTGCCCTaGCCCAACCTCATGGGATCC +
Preference number: 4 (lower is better)
Translates to: RFPRPAGHPQREAPHPWPQEALP*PNLMGS
Trigger: GGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTG...TGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAAACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CGGTTTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCAGCCTCGCCGATGCCCTaGACTTTTCCTAGTGCACCC +
Preference number: 4 (lower is better)
Translates to: RFPRPAGHPQREAPHPWPASPMP*TFPSAP
Trigger: GGGTGCACTAGGAAAAGTGCAGGGCATCGGCGAGGC...TGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAAACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp ATGGAGCAGACCGTCCCCTGCAGTCTGTTGGGACACAGCACCCGGGGCCCTGACGCCTCGCCGATGCCCTaGACTTTTCCTAGTGCACCC +
Preference number: 4 (lower is better)
Translates to: MEQTVPCSLLGHSTRGPDASPMP*TFPSAP
Trigger: GGGTGCACTAGGAAAAGTGCAGGGCATCGGCGAGGC...GTCAGGGCCCCGGGTGCTGTGTCCCAACAGACTGCAGGGGACGGTCTGCTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CGCACGCTGTCGGTCTTGCTGCTCTTGGACTCCATGGGGAACAGTGTGGGCGCCCTCCTGCCACGGCTGTaGCCTGTCCCCTGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: RTLSVLLLLDSMGNSVGALLPRL*PVPCVC
Trigger: ACAAACGCAGGGGACAGGGCACAGCCGTGGCAGGAG...GGCGCCCACACTGTTCCCCATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382123.1
CDS-3UTR GCA 90 bp GCCCACAGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCTCCTGCCACGGCTGTaGCCTGTCCCCTGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: AHSLGKAFSRPWHFSHHPLLPRL*PVPCVC
Trigger: ACAAACGCAGGGGACAGGGCACAGCCGTGGCAGGAG...AGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACTGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CCCATGACTGTGCCTGAGTTCCAAGGGGACAGAGCCCATCCCTGCATCCTGCCTAGGCCCACGGGCAGGTaGTGGCCACCCTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PMTVPEFQGDRAHPCILPRPTGR*WPPSLP
Trigger: AGGAAGGGAGGGTGGCCAGCACCTGCCCGTGGGCCT...AGGCAGGATGCAGGGATGGGCTCTGTCCCCTTGGAACTCAGGCACAGTCATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp ACAAGAAGCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATCACCTCTGCCTGGGCTaGACCCCAGGCCCACGGGCA +
Preference number: 4 (lower is better)
Translates to: TRSPALPQPHGILRFRDHHLCLG*TPGPRA
Trigger: TGCCCGTGGGCCTGGGGTGCAGCCCAGGCAGAGGTG...ATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GTGCAGTGGACAGGGAGCGCCAGCAGGTCAGGCATGAGTACAGACAGGCAAAGACACCTCTGCCTGGGCTaGACCCCAGGCCCACGGGCA +
Preference number: 4 (lower is better)
Translates to: VQWTGSASRSGMSTDRQRHLCLG*TPGPRA
Trigger: TGCCCGTGGGCCTGGGGTGCAGCCCAGGCAGAGGTG...TCTTTGCCTGTCTGTACTCATGCCTGACCTGCTGGCGCTCCCTGTCCACTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GCAGTCTGTTGGGACACAGCACCCGGGGCCCTGACCGCCAGGCAGTTCCTGAGGCTCCCATCCCACCACTaGCTGGGTTCAAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: AVCWDTAPGALTARQFLRLPSHH*LGSRVS
Trigger: ACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAG...CCTCAGGAACTGCCTGGCGGTCAGGGCCCCGGGTGCTGTGTCCCAACAGACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp GTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAGAGCGGGGTCACATCGTaGAGGAGGCAGGGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: VSARLSAAPGTSPTILQESGVTS*RRQGRG
Trigger: TCCCCGACCCTGCCTCCTCCACGATGTGACCCCGCT...CTCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CTGCATCCTGCCTCCCACATTGTGGACTGCACATGCCATGGGCCGTCAGGGCGCGTTTCCCAGACCAGCTaGGCACCCACAGCGCGAAGC +
Preference number: 4 (lower is better)
Translates to: LHPASHIVDCTCHGPSGRVSQTS*APTARS
Trigger: GCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAAAC...GCGCCCTGACGGCCCATGGCATGTGCAGTCCACAATGTGGGAGGCAGGATGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGCCTGCTTGCCTGCCTGACTCCCCTCCAAGCTaGCCTCGCTACCCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: HRLRSQRPAPELMPACLPDSPPS*PRYPRG
Trigger: CCCTCTGGGGTAGCGAGGCCAGCTTGGAGGGGAGTC...AGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp ATGGAGCAGACCGTCCCCTGCAGTCTGTTGGGACACAGCACCCGGGGCCCTGACCCGGTCCCCAGGGTATaGAAGCCAGGGGCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: MEQTVPCSLLGHSTRGPDPVPRV*KPGAFV
Trigger: TACAAAGGCCCCTGGCTTCCATACCCTGGGGACCGG...GTCAGGGCCCCGGGTGCTGTGTCCCAACAGACTGCAGGGGACGGTCTGCTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp AGGGAGGATTGCAAAGCCTCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTGCGGAGGGGGTGGACTaGGGGCCAAGCTCACTGCCC +
Preference number: 4 (lower is better)
Translates to: REDCKASRLLQALPGTQSAEGVD*GPSSLP
Trigger: GGGCAGTGAGCTTGGCCCTCAGTCCACCCCCTCCGC...ACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGAGGCTTTGCAATCCTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp ATCCTCTTCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCGCGGAGGGGGTGGACTaGGGGCCAAGCTCACTGCCC +
Preference number: 4 (lower is better)
Translates to: ILFQPRLVQEASGSNGASAEGVD*GPSSLP
Trigger: GGGCAGTGAGCTTGGCCCTCAGTCCACCCCCTCCGC...GCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGAAGAGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp GCCCACAGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCAGACACAAGGGCTCTaGGCGGGGTCACATCGTGGA +
Preference number: 4 (lower is better)
Translates to: AHSLGKAFSRPWHFSHHPQTQGL*AGSHRG
Trigger: TCCACGATGTGACCCCGCTCAGAGCCCTTGTGTCTG...AGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACTGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp CGCACGCTGTCGGTCTTGCTGCTCTTGGACTCCATGGGGAACAGTGTGGGCGCCCCGCCAGGCAGTTCCTaGGGGAGGATTGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: RTLSVLLLLDSMGNSVGAPPGSS*GRIAKP
Trigger: AGGCTTTGCAATCCTCCCTCAGGAACTGCCTGGCGG...GGCGCCCACACTGTTCCCCATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382123.1
CDS-3UTR TCA 90 bp CACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGCCTGCTTGCCTGCCTTGCTTGCCTGCCTGCTaGGGGCGAGAATGCACCTGC +
Preference number: 4 (lower is better)
Translates to: HRLRSQRPAPELMPACLPCLPAC*GRECTC
Trigger: GCAGGTGCATTCTCGCCCTCAGCAGGCAGGCAAGCA...AGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp TTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGGACCCTCTCTCTTCCAAGGCCGCCCTTGGGCGAACCTaGCGGGGGCCTCGGAATCCA +
Preference number: 4 (lower is better)
Translates to: LALAAPGTRSQDPLSSKAALGRT*RGPRNP
Trigger: TGGATTCCGAGGCCCCCGGCAGGTTCGCCCAAGGGC...GGCCTTGGAAGAGAGAGGGTCCTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR GCA 90 bp ATGGAGCAGACCGTCCCCTGCAGTCTGTTGGGACACAGCACCCGGGGCCCTGACCGCTGTCGGTCTTGCTaGTCTTGGACTCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: MEQTVPCSLLGHSTRGPDRCRSC*SWTPWG
Trigger: TCCCCATGGAGTCCAAGAGCAGCAAGACCGACAGCG...GTCAGGGCCCCGGGTGCTGTGTCCCAACAGACTGCAGGGGACGGTCTGCTCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR GCA 90 bp CCCATGACTGTGCCTGAGTTCCAAGGGGACAGAGCCCATCCCTGCATCCTGCCTCTCCGCCAGCAGCCGTaGCTGGCGGGCCTTAGTAGT +
Preference number: 4 (lower is better)
Translates to: PMTVPEFQGDRAHPCILPLRQQP*LAGLSS
Trigger: ACTACTAAGGCCCGCCAGGCACGGCTGCTGGCGGAG...AGGCAGGATGCAGGGATGGGCTCTGTCCCCTTGGAACTCAGGCACAGTCATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GCCCACAGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTGAGCAGACCGTCCCCTaGAGTCTGTTGGGACACAGC +
Preference number: 4 (lower is better)
Translates to: AHSLGKAFSRPWHFSHHPEQTVP*SLLGHS
Trigger: GCTGTGTCCCAACAGACTGCAGGGGACGGTCTGCTC...AGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACTGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GCAGTCTGTTGGGACACAGCACCCGGGGCCCTGACCGCCAGGCAGTTCCTGAGGTCAGCTCCCTCCACTTaGATCCACCTCTGTCCACTG +
Preference number: 4 (lower is better)
Translates to: AVCWDTAPGALTARQFLRSAPST*IHLCPL
Trigger: CAGTGGACAGAGGTGGATGCAAGTGGAGGGAGCTGA...CCTCAGGAACTGCCTGGCGGTCAGGGCCCCGGGTGCTGTGTCCCAACAGACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GCAGTCTGTTGGGACACAGCACCCGGGGCCCTGACCGCCAGGCAGTTCCTGAGGTTCTCCCTGGTTTCCTaGCCTTGGTACACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: AVCWDTAPGALTARQFLRFSLVS*PWYTAL
Trigger: GAGGGCTGTGTACCAAGGGCAGGAAACCAGGGAGAA...CCTCAGGAACTGCCTGGCGGTCAGGGCCCCGGGTGCTGTGTCCCAACAGACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATGAGAATACCCTCCATCCACCTCTaGCTGGGCTGCACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ALPCPNLMGSCVSGTMRIPSIHL*LGCTPG
Trigger: GCCTGGGGTGCAGCCCAGGCAGAGGTGGATGGAGGG...TATTCTCATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp AGGGAGGATTGCAAAGCCTCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTCAGCCCGCCGCCTCCTaGCCTCCCATCCCACCACTG +
Preference number: 4 (lower is better)
Translates to: REDCKASRLLQALPGTQSQPAAS*PPIPPL
Trigger: CAGTGGTGGGATGGGAGGGCAGGAGGCGGCGGGCTG...ACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGAGGCTTTGCAATCCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGCCTGCTTGCCTGCCTCAGGGACACAGACGCTaGAAGCCAGGGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HRLRSQRPAPELMPACLPQGHRR*KPGCSS
Trigger: GCTGCTGCACCCTGGCTTCCAGCGTCTGTGTCCCTG...AGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp GGGCAGGGACACAGACGCTGGAAGCCAGGGTGCAGCAGCGAGGGGAGAAGCCCCCACAAAGTAGAAGGCTaGGCTGGAGCTGCATGGGTA +
Preference number: 4 (lower is better)
Translates to: GQGHRRWKPGCSSEGRSPHKVEG*AGAAWV
Trigger: TACCCATGCAGCTCCAGCCCAGCCTTCTACTTTGTG...GGGGCTTCTCCCCTCGCTGCTGCACCCTGGCTTCCAGCGTCTGTGTCCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp AGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCTGTCTCCCCTGCAGTCTGTTaGGACACAGCACCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: RTVTRILLAALLPRLCPVSPAVC*DTAPGA
Trigger: GGCCCCGGGTGCTGTGTCCCAACAGACTGCAGGGGA...GACAGGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp TGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCCTCGGCTTCTTCTGCCATGCCCCTTCCCTaGGAAGGTTTGCCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: WAPTARSSTPMATASASSAMPLP*EGLPAF
Trigger: GAAGGCAGGCAAACCTTCCCAGGGAAGGGGCATGGC...AGAAGAAGCCGAGGCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp GGGCAGGGACACAGACGCTGGAAGCCAGGGTGCAGCAGCGAGGGGAGAAGCCCCCTCCCAGGCATAACATaGAAGACACCTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: GQGHRRWKPGCSSEGRSPLPGIT*KTPGHW
Trigger: CCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAG...GGGGCTTCTCCCCTCGCTGCTGCACCCTGGCTTCCAGCGTCTGTGTCCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp AGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCTGTCAGGGGTGTTTCCTCCTaGCCCCTGTCCCAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RTVTRILLAALLPRLCPVRGVSS*PLSQAA
Trigger: GGCTGCCTGGGACAGGGGCCAGGAGGAAACACCCCT...GACAGGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp TTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCTGCGTGGGAGGAGTGCAGTaGACAGGGAGCGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FPKHEAHGHAPSLGRFACVGGVQ*TGSASR
Trigger: CCTGCTGGCGCTCCCTGTCCACTGCACTCCTCCCAC...GCAGGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp CGGTTTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCATCTTGTCTCGCACTTTaGGGGAGTAGGCCAAGGCGA +
Preference number: 4 (lower is better)
Translates to: RFPRPAGHPQREAPHPWPSCLAL*GSRPRR
Trigger: TCGCCTTGGCCTACTCCCTCAAAGTGCGAGACAAGA...TGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR TCA 90 bp CGGTTTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCAGCTGTACTCAGCTTCTaGTGGCCTTGCTGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: RFPRPAGHPQREAPHPWPAVLSF*WPCCPV
Trigger: AACTGGGCAGCAAGGCCATCAGAAGCTGAGTACAGC...TGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp TTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCGCTGTACTCAGCTTCTaGTGGCCTTGCTGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: FPDQLGTHSAKLHTHGHCAVLSF*WPCCPV
Trigger: AACTGGGCAGCAAGGCCATCAGAAGCTGAGTACAGC...GCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp TCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCTCGGGGAGCACAGAGTaGGTCCTCCCAACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SRLLQALPGTQSRRLGWSSGSTE*VLPTWD
Trigger: GTCCCAGGTTGGGAGGACTCACTCTGTGCTCCCCGA...GCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp CACCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGCCCCATGACTGTGCCTaGGTTCCAAGGGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: HHPPRGSMTAPCSPASASPHDCA*VPRGQS
Trigger: GCTCTGTCCCCTTGGAACTCAGGCACAGTCATGGGG...CGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp ACGGCTGTGCCCTGTCCCCTGCGTTTGTCCCATCTGCTGCTAGCTCAAGGTCCTGAGCTTCCCAAAACATaGGGCGCACGGCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: TAVPCPLRLSHLLLAQGPELPKT*GARPCP
Trigger: GGGGCATGGCCGTGCGCCTCATGTTTTGGGAAGCTC...AGGACCTTGAGCTAGCAGCAGATGGGACAAACGCAGGGGACAGGGCACAGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp TTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCTGCGAGCTTCCCAAAACATaGGGCGCACGGCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: FPKHEAHGHAPSLGRFACELPKT*GARPCP
Trigger: GGGGCATGGCCGTGCGCCTCATGTTTTGGGAAGCTC...GCAGGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp CCATCTGCTGCTAGCTCAAGGTCCTCCCTTCTGAGGCACCCCACGTCTCCAGCCACCAGTCAACCCCACTaGCTGCACAGCTGCCACGCA +
Preference number: 4 (lower is better)
Translates to: PSAASSRSSLLRHPTSPATSQPH*LHSCHA
Trigger: TGCGTGGCAGCTGTGCAGTCAGTGGGGTTGACTGGT...GGCTGGAGACGTGGGGTGCCTCAGAAGGGAGGACCTTGAGCTAGCAGCAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp AGCTTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCCAAGGTCCTCCCTTCTaGGGCACCCCACGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SFPKHEAHGHAPSLGRFAQGPPF*GTPRLQ
Trigger: CTGGAGACGTGGGGTGCCTCAGAAGGGAGGACCTTG...GGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp CGGTTTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCATCTGGGTCAGGACTGTaGCCAGAATCTTGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: RFPRPAGHPQREAPHPWPSGSGL*PESCSL
Trigger: CAGCGAGCAAGATTCTGGTCACAGTCCTGACCCAGA...TGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp GCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGCGGTTTCCCAGACCCCTCTCTCGACTCTaGCCCCCAAGCCCTCCCATT +
Preference number: 4 (lower is better)
Translates to: ASPSHCAPELRDFLRFPRPLSRL*PPSPPI
Trigger: AATGGGAGGGCTTGGGGGTCAGAGTCGAGAGAGGGG...TCTGGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp TCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCATCCGAAGACCAGCGCCGGAGCTaGTGCCTGCTTGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SSPGLSRKPLGLMVQASEDQRRS*CLLACL
Trigger: CAGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGTC...TTCGGATGCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp ACGGCTGTGCCCTGTCCCCTGCGTTTGTCCCATCTGCTGCTAGCTCAAGGTCCTTTCTTCTCGGCTAGGTaGTTGCAGGCAGGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: TAVPCPLRLSHLLLAQGPFFSAR*LQAGGA
Trigger: CGCGCCCCCTGCCTGCAAGCACCTAGCCGAGAAGAA...AGGACCTTGAGCTAGCAGCAGATGGGACAAACGCAGGGGACAGGGCACAGCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR GCA 90 bp GGTCAGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCCAGCCGGGCCGTCTTTaGATCCTCCACGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: GQDCDQNLARCTPATAVPQPGRL*ILHGSI
Trigger: AATGGAGCCGTGGAGGATGCAAAGACGGCCCGGCTG...GGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CACCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGCAAGAAGCCCTGCCCTaGCCCAACCTCATGGGATCC +
Preference number: 4 (lower is better)
Translates to: HHPPRGSMTAPCSPASASQEALP*PNLMGS
Trigger: GGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTG...CGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CCATCTGCTGCTAGCTCAAGGTCCTCCCTTCTGAGGCACCCCACGTCTCCAGCCGAGGGCCAAGCTCACTaGCCCCTTGCTGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: PSAASSRSSLLRHPTSPAEGQAH*PLAVLS
Trigger: GCTGAGTACAGCAAGGGGGCAGTGAGCTTGGCCCTC...GGCTGGAGACGTGGGGTGCCTCAGAAGGGAGGACCTTGAGCTAGCAGCAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGCAGAGCAGACCGTCCCCTaGAGTCTGTTGGGACACAGC +
Preference number: 4 (lower is better)
Translates to: PSSKRLNDSSVQPRISLAEQTVP*SLLGHS
Trigger: GCTGTGTCCCAACAGACTGCAGGGGACGGTCTGCTC...TGCGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CTGCATCCTGCCTCCCACATTGTGGACTGCACATGCCATGGGCCGTCAGGGCGCGGCGTCTATCGTCTCTaGCTGCTGCTTCCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: LHPASHIVDCTCHGPSGRGVYRL*LLLPSE
Trigger: CTCGGAAGGAAGCAGCAGGCAGAGACGATAGACGCC...GCGCCCTGACGGCCCATGGCATGTGCAGTCCACAATGTGGGAGGCAGGATGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp TGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCCTCGGCTTCTTCTGGCGTCTATCGTCTCTaGCTGCTGCTTCCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: WAPTARSSTPMATASASSGVYRL*LLLPSE
Trigger: CTCGGAAGGAAGCAGCAGGCAGAGACGATAGACGCC...AGAAGAAGCCGAGGCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CGGTTTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCATCCCACATTGTGGACTaGACATGCCATGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: RFPRPAGHPQREAPHPWPSHIVD*TCHGPS
Trigger: TGACGGCCCATGGCATGTGCAGTCCACAATGTGGGA...TGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGCGGTTTCCCAGAGTCAACCCCACTGACTaGACAGCTGCCACGCAGGCG +
Preference number: 4 (lower is better)
Translates to: ASPSHCAPELRDFLRFPRVNPTD*TAATQA
Trigger: CGCCTGCGTGGCAGCTGTGCAGTCAGTGGGGTTGAC...TCTGGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GCAGTCTGTTGGGACACAGCACCCGGGGCCCTGACCGCCAGGCAGTTCCTGAGGGGGTTCAAGGGTCAGTaGTCAAGAGTCCCACATGGT +
Preference number: 4 (lower is better)
Translates to: AVCWDTAPGALTARQFLRGFKGQ*SRVPHG
Trigger: ACCATGTGGGACTCTTGAGCACTGACCCTTGAACCC...CCTCAGGAACTGCCTGGCGGTCAGGGCCCCGGGTGCTGTGTCCCAACAGACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CCCATGACTGTGCCTGAGTTCCAAGGGGACAGAGCCCATCCCTGCATCCTGCCTTGCCCACAACCAGGCTaGCCACAGTCTCGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: PMTVPEFQGDRAHPCILPCPQPG*PQSRQG
Trigger: GCCTTGCCGAGACTGTGGGCAGCCTGGTTGTGGGCA...AGGCAGGATGCAGGGATGGGCTCTGTCCCCTTGGAACTCAGGCACAGTCATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp AGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCTGTCGGGCGAGAATGCACCTaGTGTGGGGGCCTGACCTCA +
Preference number: 4 (lower is better)
Translates to: RTVTRILLAALLPRLCPVGRECT*CGGLTS
Trigger: TGAGGTCAGGCCCCCACAGCAGGTGCATTCTCGCCC...GACAGGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp AGCTTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCGAGCTGATGCCTGCTTaGCTGCCTGCTGAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: SFPKHEAHGHAPSLGRFAELMPA*LPAEGE
Trigger: CTCGCCCTCAGCAGGCAGGCAAGCAGGCATCAGCTC...GGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CTCCTTCGTGTGCCTCGCCGATGCCCTGCACTTTTCCTAGTGCACCCTCATCAGGCAGGGCAGGGGGCTTaGACACGCAAGCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLRVPRRCPALFLVHPHQAGQGA*TRKRSS
Trigger: GCTGCTTCGCTTGCGTGTCCAAGCCCCCTGCCCTGC...CTGATGAGGGTGCACTAGGAAAAGTGCAGGGCATCGGCGAGGCACACGAAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CCA 90 bp ATGGAGCAGACCGTCCCCTGCAGTCTGTTGGGACACAGCACCCGGGGCCCTGACCGGTCTTGCTGCTCTTaGACTCCATGGGGAACAGTG +
Preference number: 4 (lower is better)
Translates to: MEQTVPCSLLGHSTRGPDRSCCS*TPWGTV
Trigger: CACTGTTCCCCATGGAGTCCAAGAGCAGCAAGACCG...GTCAGGGCCCCGGGTGCTGTGTCCCAACAGACTGCAGGGGACGGTCTGCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CCA 90 bp TTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGGACCCTCTCTCTTCCAAGGCCGCCAGCAGCCGTGCCTaGCGGGCCTTAGTAGTCGGT +
Preference number: 4 (lower is better)
Translates to: LALAAPGTRSQDPLSSKAASSRA*RALVVG
Trigger: ACCGACTACTAAGGCCCGCCAGGCACGGCTGCTGGC...GGCCTTGGAAGAGAGAGGGTCCTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCGCCAGCAGCCGTGCCTaGCGGGCCTTAGTAGTCGGT +
Preference number: 4 (lower is better)
Translates to: PPRHNMEDTWTLGLALAAASSRA*RALVVG
Trigger: ACCGACTACTAAGGCCCGCCAGGCACGGCTGCTGGC...GGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp GTGCAGTGGACAGGGAGCGCCAGCAGGTCAGGCATGAGTACAGACAGGCAAAGAGCCAGCAGCCGTGCCTaGCGGGCCTTAGTAGTCGGT +
Preference number: 4 (lower is better)
Translates to: VQWTGSASRSGMSTDRQRASSRA*RALVVG
Trigger: ACCGACTACTAAGGCCCGCCAGGCACGGCTGCTGGC...TCTTTGCCTGTCTGTACTCATGCCTGACCTGCTGGCGCTCCCTGTCCACTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp ACAAGAAGCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATAGCGGGGTCACATCGTaGAGGAGGCAGGGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: TRSPALPQPHGILRFRDHSGVTS*RRQGRG
Trigger: TCCCCGACCCTGCCTCCTCCACGATGTGACCCCGCT...ATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CTCCTTCGTGTGCCTCGCCGATGCCCTGCACTTTTCCTAGTGCACCCTCATCAGGACTCCCCTCCAAGCTaGCCTCGCTACCCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLRVPRRCPALFLVHPHQDSPPS*PRYPRG
Trigger: CCCTCTGGGGTAGCGAGGCCAGCTTGGAGGGGAGTC...CTGATGAGGGTGCACTAGGAAAAGTGCAGGGCATCGGCGAGGCACACGAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp GTGCAGTGGACAGGGAGCGCCAGCAGGTCAGGCATGAGTACAGACAGGCAAAGAGTGGGAGGAGTGCAGTaGACAGGGAGCGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VQWTGSASRSGMSTDRQRVGGVQ*TGSASR
Trigger: CCTGCTGGCGCTCCCTGTCCACTGCACTCCTCCCAC...TCTTTGCCTGTCTGTACTCATGCCTGACCTGCTGGCGCTCCCTGTCCACTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CCTCCCATCCCACCACTGCCTGGGTTCAAGGGTCAGTGCTCAAGAGTCCCACATGTGGGAGGAGTGCAGTaGACAGGGAGCGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PPIPPLPGFKGQCSRVPHVGGVQ*TGSASR
Trigger: CCTGCTGGCGCTCCCTGTCCACTGCACTCCTCCCAC...ATGTGGGACTCTTGAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CAA 72 bp TGCACTCCTGCCACGGCTGTGCCCTGTCCCCTGCGTTaGTCCCATCTGCTGCTAGCTCAAGGTCCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: CTPATAVPCPLR*SHLLLAQGPPF
Trigger: GAAGGGAGGACCTTGAGCTAGCAGCAGATGGGACAAACGCAGGGGACAGGGCACAGCCGTGGCAGGAGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp TCCCACGGAATAGCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGTCGGGGAGCACAGAGTaGGTCCTCCCAACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SHGIASPSHCAPELRDFLSGSTE*VLPTWD
Trigger: GTCCCAGGTTGGGAGGACTCACTCTGTGCTCCCCGA...CAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGCTATTCCGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp TCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCCCCCATGACTGTGCCTaGGTTCCAAGGGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: SRLLQALPGTQSRRLGWSPHDCA*VPRGQS
Trigger: GCTCTGTCCCCTTGGAACTCAGGCACAGTCATGGGG...GCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp TTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCTGCCCCCATGACTGTGCCTaGGTTCCAAGGGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: FPKHEAHGHAPSLGRFACPHDCA*VPRGQS
Trigger: GCTCTGTCCCCTTGGAACTCAGGCACAGTCATGGGG...GCAGGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp TCCCACGGAATAGCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGGAGCTTCCCAAAACATaGGGCGCACGGCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: SHGIASPSHCAPELRDFLELPKT*GARPCP
Trigger: GGGGCATGGCCGTGCGCCTCATGTTTTGGGAAGCTC...CAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGCTATTCCGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp TCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCACCAGTCAACCCCACTaGCTGCACAGCTGCCACGCA +
Preference number: 4 (lower is better)
Translates to: SRLLQALPGTQSRRLGWSTSQPH*LHSCHA
Trigger: TGCGTGGCAGCTGTGCAGTCAGTGGGGTTGACTGGT...GCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp ATAGTCGTTCACCTCGGTGGTGTCCGGGTAGACCTCGATGACGGTCGTGGGGTTCAAGGTCCTCCCTTCTaGGGCACCCCACGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: IVVHLGGVRVDLDDGRGVQGPPF*GTPRLQ
Trigger: CTGGAGACGTGGGGTGCCTCAGAAGGGAGGACCTTG...AACCCCACGACCGTCATCGAGGTCTACCCGGACACCACCGAGGTGAACGACTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382123.1
CDS-3UTR TCA 90 bp GAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGCCCCTCTCTCGACTCTaGCCCCCAAGCCCTCCCATT +
Preference number: 4 (lower is better)
Translates to: EDTWTLGLALAAPGTRSQPLSRL*PPSPPI
Trigger: AATGGGAGGGCTTGGGGGTCAGAGTCGAGAGAGGGG...CTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp GCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATGAGAATATGCTTGCCTGCCTGCTaGGGGCGAGAATGCACCTGC +
Preference number: 4 (lower is better)
Translates to: ALPCPNLMGSCVSGTMRICLPAC*GRECTC
Trigger: GCAGGTGCATTCTCGCCCTCAGCAGGCAGGCAAGCA...TATTCTCATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp TTCCTGCCCTTGGTACACAGCCCTCTCCACTGGGCTGTCCAAGTCAAGGGACAGTGCTTGCCTGCCTGCTaGGGGCGAGAATGCACCTGC +
Preference number: 4 (lower is better)
Translates to: FLPLVHSPLHWAVQVKGQCLPAC*GRECTC
Trigger: GCAGGTGCATTCTCGCCCTCAGCAGGCAGGCAAGCA...CTGTCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GGTCAGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCGCACGCTGTCGGTCTTaGTGCTCTTGGACTCCATGG +
Preference number: 4 (lower is better)
Translates to: GQDCDQNLARCTPATAVPARCRS*CSWTPW
Trigger: CCATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGC...GGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR GCA 90 bp CCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCTTCTTCTCGGCTAGGTaGTTGCAGGCAGGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: PPRHNMEDTWTLGLALAAFFSAR*LQAGGA
Trigger: CGCGCCCCCTGCCTGCAAGCACCTAGCCGAGAAGAA...GGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR GCA 90 bp ATGGAGCAGACCGTCCCCTGCAGTCTGTTGGGACACAGCACCCGGGGCCCTGACAGCTCACTGCCCCCTTaGTGTACTCAGCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: MEQTVPCSLLGHSTRGPDSSLPP*CTQLLM
Trigger: CATCAGAAGCTGAGTACAGCAAGGGGGCAGTGAGCT...GTCAGGGCCCCGGGTGCTGTGTCCCAACAGACTGCAGGGGACGGTCTGCTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GCAGTCTGTTGGGACACAGCACCCGGGGCCCTGACCGCCAGGCAGTTCCTGAGGTTCCTGAGGGAGGATTaGAAAGCCTCCAGACTTCTC +
Preference number: 4 (lower is better)
Translates to: AVCWDTAPGALTARQFLRFLRED*KASRLL
Trigger: GAGAAGTCTGGAGGCTTTGCAATCCTCCCTCAGGAA...CCTCAGGAACTGCCTGGCGGTCAGGGCCCCGGGTGCTGTGTCCCAACAGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GCTTCTCCCCCACCTTACCTTCCAAACCAGTCAACCCCACTGACTGCACAGCTGCCCACCTCCTTCGTGTaGCTCGCCGATGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: ASPPPYLPNQSTPLTAQLPTSFV*LADALH
Trigger: GTGCAGGGCATCGGCGAGGCACACGAAGGAGGTGGG...CAGCTGTGCAGTCAGTGGGGTTGACTGGTTTGGAAGGTAAGGTGGGGGAGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGCCTGCTTGCCTGCCTACTGCGCACCTGAGCTaGGGGATTTCCTGCGGTTTC +
Preference number: 4 (lower is better)
Translates to: HRLRSQRPAPELMPACLPTAHLS*GISCGF
Trigger: GAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGT...AGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp AGCTTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCGCAAGTCCTTCCCACTaGGCACCTGAGCTGCGGGAT +
Preference number: 4 (lower is better)
Translates to: SFPKHEAHGHAPSLGRFAASPSH*APELRD
Trigger: ATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC...GGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCGTCAACCCCACTGACTaGACAGCTGCCACGCAGGCG +
Preference number: 4 (lower is better)
Translates to: PPRHNMEDTWTLGLALAAVNPTD*TAATQA
Trigger: CGCCTGCGTGGCAGCTGTGCAGTCAGTGGGGTTGAC...GGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp TTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGGACCCTCTCTCTTCCAAGGCCCTCCTGCCACGGCTGTaGCCTGTCCCCTGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: LALAAPGTRSQDPLSSKALLPRL*PVPCVC
Trigger: ACAAACGCAGGGGACAGGGCACAGCCGTGGCAGGAG...GGCCTTGGAAGAGAGAGGGTCCTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGCGGTTTCCCAGATCAATGACAGCTCCGTaGAGCCCCGCATCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: ASPSHCAPELRDFLRFPRSMTAP*SPASAS
Trigger: CGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGA...TCTGGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp ACAAGAAGCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATTGCCCACAACCAGGCTaGCCACAGTCTCGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: TRSPALPQPHGILRFRDHCPQPG*PQSRQG
Trigger: GCCTTGCCGAGACTGTGGGCAGCCTGGTTGTGGGCA...ATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CCACTTGCATCCACCTCTGTCCACTGGACTCCCCTCCAAGCTGGCCTCGCTACCTGCAAGCATCCGAAGTaGCCACAACCAGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PLASTSVHWTPLQAGLATCKHPK*PQPGCP
Trigger: TGGGCAGCCTGGTTGTGGGCACTTCGGATGCTTGCA...GGTAGCGAGGCCAGCTTGGAGGGGAGTCCAGTGGACAGAGGTGGATGCAAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCGAGCTGATGCCTGCTTaGCTGCCTGCTGAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: PPRHNMEDTWTLGLALAAELMPA*LPAEGE
Trigger: CTCGCCCTCAGCAGGCAGGCAAGCAGGCATCAGCTC...GGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp TTCCTGCCCTTGGTACACAGCCCTCTCCACTGGGCTGTCCAAGTCAAGGGACAGGTTTCCCAGACCAGCTaGGCACCCACAGCGCGAAGC +
Preference number: 4 (lower is better)
Translates to: FLPLVHSPLHWAVQVKGQVSQTS*APTARS
Trigger: GCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAAAC...CTGTCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp AGGGAGGATTGCAAAGCCTCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTGACTCCCCTCCAAGCTaGCCTCGCTACCCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: REDCKASRLLQALPGTQSDSPPS*PRYPRG
Trigger: CCCTCTGGGGTAGCGAGGCCAGCTTGGAGGGGAGTC...ACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGAGGCTTTGCAATCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CCCATGACTGTGCCTGAGTTCCAAGGGGACAGAGCCCATCCCTGCATCCTGCCTTCCACCTCTGTCCACTaGACTCCCCTCCAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: PMTVPEFQGDRAHPCILPSTSVH*TPLQAG
Trigger: GCCAGCTTGGAGGGGAGTCCAGTGGACAGAGGTGGA...AGGCAGGATGCAGGGATGGGCTCTGTCCCCTTGGAACTCAGGCACAGTCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp TCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCTCCACCTCTGTCCACTaGACTCCCCTCCAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SRLLQALPGTQSRRLGWSSTSVH*TPLQAG
Trigger: GCCAGCTTGGAGGGGAGTCCAGTGGACAGAGGTGGA...GCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp ACGGCTGTGCCCTGTCCCCTGCGTTTGTCCCATCTGCTGCTAGCTCAAGGTCCTGCTTTCAGCCGCCCCTaGCACTTCTCCCACCATCCT +
Preference number: 4 (lower is better)
Translates to: TAVPCPLRLSHLLLAQGPAFSRP*HFSHHP
Trigger: AGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGC...AGGACCTTGAGCTAGCAGCAGATGGGACAAACGCAGGGGACAGGGCACAGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp GCTTCTCCCCCACCTTACCTTCCAAACCAGTCAACCCCACTGACTGCACAGCTGAGGGGTGTTTCCTCCTaGCCCCTGTCCCAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: ASPPPYLPNQSTPLTAQLRGVSS*PLSQAA
Trigger: GGCTGCCTGGGACAGGGGCCAGGAGGAAACACCCCT...CAGCTGTGCAGTCAGTGGGGTTGACTGGTTTGGAAGGTAAGGTGGGGGAGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp TCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCATCCGAACCGGGTAGACCTCGATaGCGGTCGTGGGGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: SSPGLSRKPLGLMVQASEPGRPR*RSWGWS
Trigger: TGACCAACCCCACGACCGTCATCGAGGTCTACCCGG...TTCGGATGCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR TCA 90 bp GCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATGAGAATACAGACACAAGGGCTCTaGGCGGGGTCACATCGTGGA +
Preference number: 4 (lower is better)
Translates to: ALPCPNLMGSCVSGTMRIQTQGL*AGSHRG
Trigger: TCCACGATGTGACCCCGCTCAGAGCCCTTGTGTCTG...TATTCTCATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp CTCCTTCGTGTGCCTCGCCGATGCCCTGCACTTTTCCTAGTGCACCCTCATCAGTGTCTGGCACAGCTGTaGTGGAGCAGACCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LLRVPRRCPALFLVHPHQCLAQL*WSRPSP
Trigger: AGGGGACGGTCTGCTCCATCACAGCTGTGCCAGACA...CTGATGAGGGTGCACTAGGAAAAGTGCAGGGCATCGGCGAGGCACACGAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp AGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCTGTCCAAGCCCTCCCATTTTaGGGTCACACACTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RTVTRILLAALLPRLCPVQALPF*GHTLPS
Trigger: GGAGGGGAGTGTGTGACCTCAAAATGGGAGGGCTTG...GACAGGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp ATCCTCTTCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCCTCCAAGAGGCTCAATaGCAGCTCCGTGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: ILFQPRLVQEASGSNGASLQEAQ*QLRAAP
Trigger: CGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAG...GCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGAAGAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp TGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCCTCGGCTTCTTCTAACTCCTTTCTCCTCTaGCACTCTCAACTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WAPTARSSTPMATASASSNSFLL*HSQLAS
Trigger: GGAGGCCAGTTGAGAGTGGCAGAGGAGAAAGGAGTT...AGAAGAAGCCGAGGCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR GCA 90 bp CTTCTGAGGCACCCCACGTCTCCAGCCCAGAAGGCTCTTCCCTTCTCTGCTTGGCGCTGTCGGTCTTGCTaGTCTTGGACTCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: LLRHPTSPAQKALPFSAWRCRSC*SWTPWG
Trigger: TCCCCATGGAGTCCAAGAGCAGCAAGACCGACAGCG...CCAAGCAGAGAAGGGAAGAGCCTTCTGGGCTGGAGACGTGGGGTGCCTCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR GCA 90 bp TTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCTGCGCACGCTGTCGGTCTTaGTGCTCTTGGACTCCATGG +
Preference number: 4 (lower is better)
Translates to: FPKHEAHGHAPSLGRFACARCRS*CSWTPW
Trigger: CCATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGC...GCAGGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR GCA 90 bp CGGTTTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCAATAAACATGTCTCAGTaGTTGTCTCCGCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: RFPRPAGHPQREAPHPWPINMSQ*LSPPAA
Trigger: GGCTGCTGGCGGAGACAAGCACTGAGACATGTTTAT...TGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAAACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp TTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCAACCTCATGGGATCCTaGGTTTCAGGGACCATGAGA +
Preference number: 4 (lower is better)
Translates to: FPDQLGTHSAKLHTHGHCNLMGS*VSGTMR
Trigger: TCTCATGGTCCCTGAAACGCAGGATCCCATGAGGTT...GCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCCAAGAAGCCCTGCCCTaGCCCAACCTCATGGGATCC +
Preference number: 4 (lower is better)
Translates to: PPRHNMEDTWTLGLALAAQEALP*PNLMGS
Trigger: GGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTG...GGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CTCCTTCGTGTGCCTCGCCGATGCCCTGCACTTTTCCTAGTGCACCCTCATCAGGAGGGCCAAGCTCACTaGCCCCTTGCTGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: LLRVPRRCPALFLVHPHQEGQAH*PLAVLS
Trigger: GCTGAGTACAGCAAGGGGGCAGTGAGCTTGGCCCTC...CTGATGAGGGTGCACTAGGAAAAGTGCAGGGCATCGGCGAGGCACACGAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp TGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCCTCGGCTTCTTCTGACTTCTCCAGGCCCTaGCAGGGACACAAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: WAPTARSSTPMATASASSDFSRP*QGHKVE
Trigger: TTCTACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTC...AGAAGAAGCCGAGGCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATGAGAATAGAGCAGACCGTCCCCTaGAGTCTGTTGGGACACAGC +
Preference number: 4 (lower is better)
Translates to: ALPCPNLMGSCVSGTMRIEQTVP*SLLGHS
Trigger: GCTGTGTCCCAACAGACTGCAGGGGACGGTCTGCTC...TATTCTCATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CCTCCCATCCCACCACTGCCTGGGTTCAAGGGTCAGTGCTCAAGAGTCCCACATATTGTGGACTGCACATaGCATGGGCCGTCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: PPIPPLPGFKGQCSRVPHIVDCT*HGPSGR
Trigger: GCGCCCTGACGGCCCATGGCATGTGCAGTCCACAAT...ATGTGGGACTCTTGAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GTGCAGTGGACAGGGAGCGCCAGCAGGTCAGGCATGAGTACAGACAGGCAAAGAATTGTGGACTGCACATaGCATGGGCCGTCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: VQWTGSASRSGMSTDRQRIVDCT*HGPSGR
Trigger: GCGCCCTGACGGCCCATGGCATGTGCAGTCCACAAT...TCTTTGCCTGTCTGTACTCATGCCTGACCTGCTGGCGCTCCCTGTCCACTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CCCATGACTGTGCCTGAGTTCCAAGGGGACAGAGCCCATCCCTGCATCCTGCCTACTGCGCACCTGAGCTaGGGGATTTCCTGCGGTTTC +
Preference number: 4 (lower is better)
Translates to: PMTVPEFQGDRAHPCILPTAHLS*GISCGF
Trigger: GAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGT...AGGCAGGATGCAGGGATGGGCTCTGTCCCCTTGGAACTCAGGCACAGTCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CTCCTTCGTGTGCCTCGCCGATGCCCTGCACTTTTCCTAGTGCACCCTCATCAGGCAAGTCCTTCCCACTaGGCACCTGAGCTGCGGGAT +
Preference number: 4 (lower is better)
Translates to: LLRVPRRCPALFLVHPHQASPSH*APELRD
Trigger: ATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC...CTGATGAGGGTGCACTAGGAAAAGTGCAGGGCATCGGCGAGGCACACGAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GCCCACAGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTTTCCCTGGGAAGGTTTaGCTGCCTTCCCACGGAATA +
Preference number: 4 (lower is better)
Translates to: AHSLGKAFSRPWHFSHHPFPGKV*LPSHGI
Trigger: TATTCCGTGGGAAGGCAGGCAAACCTTCCCAGGGAA...AGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CTTCTGAGGCACCCCACGTCTCCAGCCCAGAAGGCTCTTCCCTTCTCTGCTTGGCAGAATCTTGCTCGCTaGACTCCTGCCACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LLRHPTSPAQKALPFSAWQNLAR*TPATAV
Trigger: CACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTG...CCAAGCAGAGAAGGGAAGAGCCTTCTGGGCTGGAGACGTGGGGTGCCTCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CTGCATCCTGCCTCCCACATTGTGGACTGCACATGCCATGGGCCGTCAGGGCGCGGGTTCAAGGGTCAGTaGTCAAGAGTCCCACATGGT +
Preference number: 4 (lower is better)
Translates to: LHPASHIVDCTCHGPSGRGFKGQ*SRVPHG
Trigger: ACCATGTGGGACTCTTGAGCACTGACCCTTGAACCC...GCGCCCTGACGGCCCATGGCATGTGCAGTCCACAATGTGGGAGGCAGGATGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp TTCCTGCCCTTGGTACACAGCCCTCTCCACTGGGCTGTCCAAGTCAAGGGACAGTCAATGACAGCTCCGTaGAGCCCCGCATCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: FLPLVHSPLHWAVQVKGQSMTAP*SPASAS
Trigger: CGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGA...CTGTCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp ATCCTCTTCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCTGCCCACAACCAGGCTaGCCACAGTCTCGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: ILFQPRLVQEASGSNGASCPQPG*PQSRQG
Trigger: GCCTTGCCGAGACTGTGGGCAGCCTGGTTGTGGGCA...GCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGAAGAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GAAGCCAGGGGCCTTTGTAGCCCCACATTGCCCGGAGTTGGATACAAACATCCCGGGCGAGAATGCACCTaGTGTGGGGGCCTGACCTCA +
Preference number: 4 (lower is better)
Translates to: EARGLCSPTLPGVGYKHPGRECT*CGGLTS
Trigger: TGAGGTCAGGCCCCCACAGCAGGTGCATTCTCGCCC...GGGATGTTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAGGCCCCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp ACAGACAGGCAAAGACACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGGGGCGAGAATGCACCTaGTGTGGGGGCCTGACCTCA +
Preference number: 4 (lower is better)
Translates to: TDRQRHRLRSQRPAPELMGRECT*CGGLTS
Trigger: TGAGGTCAGGCCCCCACAGCAGGTGCATTCTCGCCC...CATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTGTCTTTGCCTGTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCTGCATGGGTATTTCAGAGCTGATGCCTGCTTaGCTGCCTGCTGAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: ALPGTQSRRLGWSCMGISELMPA*LPAEGE
Trigger: CTCGCCCTCAGCAGGCAGGCAAGCAGGCATCAGCTC...TGAAATACCCATGCAGCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp GTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAGACCCTCTTTCCTGTCTaGAAGGCCAGTCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: VSARLSAAPGTSPTILQETLFPV*KASPAW
Trigger: CCAAGCAGGACTGGCCTTCCAGACAGGAAAGAGGGT...CTCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CCA 90 bp GCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATGAGAATAGAAGCTGAGGATGCATaGCGGCCCCCGTTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: ALPCPNLMGSCVSGTMRIEAEDA*RPPFSL
Trigger: GAGGGAAAACGGGGGCCGCCATGCATCCTCAGCTTC...TATTCTCATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CCA 90 bp AGCTTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCTGCTCTTGGACTCCATaGGGAACAGTGTGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: SFPKHEAHGHAPSLGRFACSWTP*GTVWAP
Trigger: TGGCGCCCACACTGTTCCCCATGGAGTCCAAGAGCA...GGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CCA 90 bp GCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCTGCATGGGTATTTCACAGGGACACAGACGCTaGAAGCCAGGGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ALPGTQSRRLGWSCMGISQGHRR*KPGCSS
Trigger: GCTGCTGCACCCTGGCTTCCAGCGTCTGTGTCCCTG...TGAAATACCCATGCAGCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp AGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAGAAGCTCCACACCCATaGCCACTGCCTCGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SLGKAFSRPWHFSHHPPREAPHP*PLPRLL
Trigger: AAGAAGCCGAGGCAGTGGCCATGGGTGTGGAGCTTC...TCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CCCATGACTGTGCCTGAGTTCCAAGGGGACAGAGCCCATCCCTGCATCCTGCCTGAAGCTCCACACCCATaGCCACTGCCTCGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PMTVPEFQGDRAHPCILPEAPHP*PLPRLL
Trigger: AAGAAGCCGAGGCAGTGGCCATGGGTGTGGAGCTTC...AGGCAGGATGCAGGGATGGGCTCTGTCCCCTTGGAACTCAGGCACAGTCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp GCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCTGCATGGGTATTTCAGTTTCCCAGACCAGCTaGGCACCCACAGCGCGAAGC +
Preference number: 4 (lower is better)
Translates to: ALPGTQSRRLGWSCMGISVSQTS*APTARS
Trigger: GCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAAAC...TGAAATACCCATGCAGCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp TGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCCTCGGCTTCTTCTCTCCCAGGCATAACATaGAAGACACCTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: WAPTARSSTPMATASASSLPGIT*KTPGHW
Trigger: CCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAG...AGAAGAAGCCGAGGCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp ACAAGAAGCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATCCGGTCCCCAGGGTATaGAAGCCAGGGGCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: TRSPALPQPHGILRFRDHPVPRV*KPGAFV
Trigger: TACAAAGGCCCCTGGCTTCCATACCCTGGGGACCGG...ATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CAA 72 bp ATGATGCAGGAGGCTGCCAGGGCAGAACTGGTGATGTaGAACAGCCGGGCCGTCTTTGCATCCTCCACGGCT +
Preference number: 4 (lower is better)
Translates to: MMQEAARAELVM*NSRAVFASSTA
Trigger: AGCCGTGGAGGATGCAAAGACGGCCCGGCTGTTCAACATCACCAGTTCTGCCCTGGCAGCCTCCTGCATCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382123.1
CDS-3UTR TCA 90 bp GCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCTGCATGGGTATTTCACCGCCAGGCAGTTCCTaGGGGAGGATTGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: ALPGTQSRRLGWSCMGISPPGSS*GRIAKP
Trigger: AGGCTTTGCAATCCTCCCTCAGGAACTGCCTGGCGG...TGAAATACCCATGCAGCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp ATCCTCTTCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCTGTCTGGCACAGCTGTaGTGGAGCAGACCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: ILFQPRLVQEASGSNGASCLAQL*WSRPSP
Trigger: AGGGGACGGTCTGCTCCATCACAGCTGTGCCAGACA...GCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGAAGAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp TCCCACGGAATAGCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGCAAGCCCTCCCATTTTaGGGTCACACACTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SHGIASPSHCAPELRDFLQALPF*GHTLPS
Trigger: GGAGGGGAGTGTGTGACCTCAAAATGGGAGGGCTTG...CAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGCTATTCCGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp AGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGACCAGCAGGTCAGGCATaGGTACAGACAGGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: SLGKAFSRPWHFSHHPPRPAGQA*VQTGKD
Trigger: GTCTTTGCCTGTCTGTACTCATGCCTGACCTGCTGG...TCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GCTTCTCCCCCACCTTACCTTCCAAACCAGTCAACCCCACTGACTGCACAGCTGCAGCCGGGCCGTCTTTaGATCCTCCACGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: ASPPPYLPNQSTPLTAQLQPGRL*ILHGSI
Trigger: AATGGAGCCGTGGAGGATGCAAAGACGGCCCGGCTG...CAGCTGTGCAGTCAGTGGGGTTGACTGGTTTGGAAGGTAAGGTGGGGGAGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp AGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCTGTCGATGATGCAGGAGGCTaGCAGGGCAGAACTGGTGAT +
Preference number: 4 (lower is better)
Translates to: RTVTRILLAALLPRLCPVDDAGG*QGRTGD
Trigger: ATCACCAGTTCTGCCCTGGCAGCCTCCTGCATCATC...GACAGGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp AGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAGATGATGCAGGAGGCTaGCAGGGCAGAACTGGTGAT +
Preference number: 4 (lower is better)
Translates to: SLGKAFSRPWHFSHHPPRDDAGG*QGRTGD
Trigger: ATCACCAGTTCTGCCCTGGCAGCCTCCTGCATCATC...TCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CTACTTTCTTCCCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGCTCCGCCAGCAGCCGTaGCTGGCGGGCCTTAGTAGT +
Preference number: 4 (lower is better)
Translates to: LLSSLPGITWKTPGHWGWLRQQP*LAGLSS
Trigger: ACTACTAAGGCCCGCCAGGCACGGCTGCTGGCGGAG...CCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGGGAAGAAAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GAAGCCAGGGGCCTTTGTAGCCCCACATTGCCCGGAGTTGGATACAAACATCCCCAGGACAAGAAGCCCTaGCCTGCCCCAACCTCATGG +
Preference number: 4 (lower is better)
Translates to: EARGLCSPTLPGVGYKHPQDKKP*PAPTSW
Trigger: CCATGAGGTTGGGGCAGGGCAGGGCTTCTTGTCCTG...GGGATGTTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAGGCCCCTGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCTGCATGGGTATTTCACAGGACAAGAAGCCCTaGCCTGCCCCAACCTCATGG +
Preference number: 4 (lower is better)
Translates to: ALPGTQSRRLGWSCMGISQDKKP*PAPTSW
Trigger: CCATGAGGTTGGGGCAGGGCAGGGCTTCTTGTCCTG...TGAAATACCCATGCAGCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp ACGGCTGTGCCCTGTCCCCTGCGTTTGTCCCATCTGCTGCTAGCTCAAGGTCCTTCCCACATTGTGGACTaGACATGCCATGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: TAVPCPLRLSHLLLAQGPSHIVD*TCHGPS
Trigger: TGACGGCCCATGGCATGTGCAGTCCACAATGTGGGA...AGGACCTTGAGCTAGCAGCAGATGGGACAAACGCAGGGGACAGGGCACAGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GAAGCCAGGGGCCTTTGTAGCCCCACATTGCCCGGAGTTGGATACAAACATCCCGCCTCGCCGATGCCCTaGACTTTTCCTAGTGCACCC +
Preference number: 4 (lower is better)
Translates to: EARGLCSPTLPGVGYKHPASPMP*TFPSAP
Trigger: GGGTGCACTAGGAAAAGTGCAGGGCATCGGCGAGGC...GGGATGTTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAGGCCCCTGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp TCCCACGGAATAGCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGCGTGTGCCTCGCCGATaGCCTGCACTTTTCCTAGTG +
Preference number: 4 (lower is better)
Translates to: SHGIASPSHCAPELRDFLRVPRR*PALFLV
Trigger: CACTAGGAAAAGTGCAGGGCATCGGCGAGGCACACG...CAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGCTATTCCGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CCTCCCATCCCACCACTGCCTGGGTTCAAGGGTCAGTGCTCAAGAGTCCCACATCGTGTGCCTCGCCGATaGCCTGCACTTTTCCTAGTG +
Preference number: 4 (lower is better)
Translates to: PPIPPLPGFKGQCSRVPHRVPRR*PALFLV
Trigger: CACTAGGAAAAGTGCAGGGCATCGGCGAGGCACACG...ATGTGGGACTCTTGAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp TTCCTGCCCTTGGTACACAGCCCTCTCCACTGGGCTGTCCAAGTCAAGGGACAGCGTGTGCCTCGCCGATaGCCTGCACTTTTCCTAGTG +
Preference number: 4 (lower is better)
Translates to: FLPLVHSPLHWAVQVKGQRVPRR*PALFLV
Trigger: CACTAGGAAAAGTGCAGGGCATCGGCGAGGCACACG...CTGTCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp ACAAGAAGCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATACTGCGCACCTGAGCTaGGGGATTTCCTGCGGTTTC +
Preference number: 4 (lower is better)
Translates to: TRSPALPQPHGILRFRDHTAHLS*GISCGF
Trigger: GAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGT...ATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CCCATGACTGTGCCTGAGTTCCAAGGGGACAGAGCCCATCCCTGCATCCTGCCTTCAGCTCCCTCCACTTaGATCCACCTCTGTCCACTG +
Preference number: 4 (lower is better)
Translates to: PMTVPEFQGDRAHPCILPSAPST*IHLCPL
Trigger: CAGTGGACAGAGGTGGATGCAAGTGGAGGGAGCTGA...AGGCAGGATGCAGGGATGGGCTCTGTCCCCTTGGAACTCAGGCACAGTCATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp ATCCTCTTCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCCTGTGCCCTGTCCCCTaGGTTTGTCCCATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ILFQPRLVQEASGSNGASLCPVP*VCPICC
Trigger: GCAGCAGATGGGACAAACGCAGGGGACAGGGCACAG...GCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGAAGAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp ACAAGAAGCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATCAGAATCTTGCTCGCTaGACTCCTGCCACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TRSPALPQPHGILRFRDHQNLAR*TPATAV
Trigger: CACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTG...ATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp TTCCTGCCCTTGGTACACAGCCCTCTCCACTGGGCTGTCCAAGTCAAGGGACAGCACCCTCCCTTCCTCTaGAGGTTTCTGGGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: FLPLVHSPLHWAVQVKGQHPPFL*RFLGQD
Trigger: GTCCTGACCCAGAAACCTGCAGAGGAAGGGAGGGTG...CTGTCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCCTCCCATCCCACCACTaGCTGGGTTCAAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: PPRHNMEDTWTLGLALAALPSHH*LGSRVS
Trigger: ACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAG...GGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp ACAGACAGGCAAAGACACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGTCAATGACAGCTCCGTaGAGCCCCGCATCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: TDRQRHRLRSQRPAPELMSMTAP*SPASAS
Trigger: CGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGA...CATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTGTCTTTGCCTGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp AGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGAGAGAGGTAAAGGGGCCTGGGCGCCGTCCGTaGTGCTGGCCGGGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: RPFSYFTAKEMGTREVKGPGRRP*CWPGLP
Trigger: TGGGAGACCCGGCCAGCACCACGGACGGCGCCCAGG...CCCCTTTACCTCTCTCGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CCA 90 bp CTACTTTCTTCCCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGAGGAGGCGGAGGGGGTaGACTGAGGGCCAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LLSSLPGITWKTPGHWGWRRRRG*TEGQAH
Trigger: GTGAGCTTGGCCCTCAGTCCACCCCCTCCGCCTCCT...CCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGGGAAGAAAGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp GTGCAGTGGACAGGGAGCGCCAGCAGGTCAGGCATGAGTACAGACAGGCAAAGAGAAGCTCCACACCCATaGCCACTGCCTCGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: VQWTGSASRSGMSTDRQREAPHP*PLPRLL
Trigger: AAGAAGCCGAGGCAGTGGCCATGGGTGTGGAGCTTC...TCTTTGCCTGTCTGTACTCATGCCTGACCTGCTGGCGCTCCCTGTCCACTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp GAAGCCAGGGGCCTTTGTAGCCCCACATTGCCCGGAGTTGGATACAAACATCCCGCCATGCCCCTTCCCTaGGAAGGTTTGCCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: EARGLCSPTLPGVGYKHPAMPLP*EGLPAF
Trigger: GAAGGCAGGCAAACCTTCCCAGGGAAGGGGCATGGC...GGGATGTTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAGGCCCCTGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp ACAAGAAGCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATCATCCCACCACTGCCTaGGTTCAAGGGTCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: TRSPALPQPHGILRFRDHHPTTA*VQGSVL
Trigger: GAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATG...ATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCCATCCCACCACTGCCTaGGTTCAAGGGTCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: PPRHNMEDTWTLGLALAAHPTTA*VQGSVL
Trigger: GAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATG...GGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp GCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCTGCATGGGTATTTCAGCTTTCAGCCGCCCCTaGCACTTCTCCCACCATCCT +
Preference number: 4 (lower is better)
Translates to: ALPGTQSRRLGWSCMGISAFSRP*HFSHHP
Trigger: AGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGC...TGAAATACCCATGCAGCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CGCACGCTGTCGGTCTTGCTGCTCTTGGACTCCATGGGGAACAGTGTGGGCGCCAACATGGAAGACACCTaGACACTGGGGTTGGCCTTA +
Preference number: 4 (lower is better)
Translates to: RTLSVLLLLDSMGNSVGANMEDT*TLGLAL
Trigger: TAAGGCCAACCCCAGTGTCCAGGTGTCTTCCATGTT...GGCGCCCACACTGTTCCCCATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382123.1
CDS-3UTR CCA 90 bp GGTCAGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCCTCCCAGGCATAACATaGAAGACACCTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: GQDCDQNLARCTPATAVPLPGIT*KTPGHW
Trigger: CCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAG...GGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CCACTTGCATCCACCTCTGTCCACTGGACTCCCCTCCAAGCTGGCCTCGCTACCATCCCAGGGAAAAGCTaGCTGAGGGCTTCCCTAATG +
Preference number: 4 (lower is better)
Translates to: PLASTSVHWTPLQAGLATIPGKS*LRASLM
Trigger: CATTAGGGAAGCCCTCAGCCAGCTTTTCCCTGGGAT...GGTAGCGAGGCCAGCTTGGAGGGGAGTCCAGTGGACAGAGGTGGATGCAAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp TGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCCTCGGCTTCTTCTGGTGCCTTTACTGGCTaGAAGGTGACCGTTCCATTT +
Preference number: 4 (lower is better)
Translates to: WAPTARSSTPMATASASSGAFTG*KVTVPF
Trigger: AAATGGAACGGTCACCTTCCAGCCAGTAAAGGCACC...AGAAGAAGCCGAGGCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp AGGGAGGATTGCAAAGCCTCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTCCGGTCCCCAGGGTATaGAAGCCAGGGGCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: REDCKASRLLQALPGTQSPVPRV*KPGAFV
Trigger: TACAAAGGCCCCTGGCTTCCATACCCTGGGGACCGG...ACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGAGGCTTTGCAATCCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp ATTGCCCGGAGTTGGATACAAACATCCCAAGAGCTAGGGGTGCCTTTACTGGCTCACTGGCCGGGGCCCTaGGCCTACAAGCGACTCCTC +
Preference number: 4 (lower is better)
Translates to: IARSWIQTSQELGVPLLAHWPGP*AYKRLL
Trigger: GAGGAGTCGCTTGTAGGCCCAGGGCCCCGGCCAGTG...AGCCAGTAAAGGCACCCCTAGCTCTTGGGATGTTTGTATCCAACTCCGGGCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382123.1
CDS-3UTR TCA 90 bp TTCCTGCCCTTGGTACACAGCCCTCTCCACTGGGCTGTCCAAGTCAAGGGACAGTCTTGTCTCGCACTTTaGGGGAGTAGGCCAAGGCGA +
Preference number: 4 (lower is better)
Translates to: FLPLVHSPLHWAVQVKGQSCLAL*GSRPRR
Trigger: TCGCCTTGGCCTACTCCCTCAAAGTGCGAGACAAGA...CTGTCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR TCA 90 bp TTCCTGCCCTTGGTACACAGCCCTCTCCACTGGGCTGTCCAAGTCAAGGGACAGTCTGGGTCAGGACTGTaGCCAGAATCTTGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: FLPLVHSPLHWAVQVKGQSGSGL*PESCSL
Trigger: CAGCGAGCAAGATTCTGGTCACAGTCCTGACCCAGA...CTGTCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CTCCTTCGTGTGCCTCGCCGATGCCCTGCACTTTTCCTAGTGCACCCTCATCAGCTGTCTGCCTGCCTGTaGCTGACTCTGAACCCTTTC +
Preference number: 4 (lower is better)
Translates to: LLRVPRRCPALFLVHPHQLSACL*LTLNPF
Trigger: GAAAGGGTTCAGAGTCAGGCACAGGCAGGCAGACAG...CTGATGAGGGTGCACTAGGAAAAGTGCAGGGCATCGGCGAGGCACACGAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340134.5
CDS-3UTR GCA 90 bp GTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAGATAAACATGTCTCAGTaGTTGTCTCCGCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VSARLSAAPGTSPTILQEINMSQ*LSPPAA
Trigger: GGCTGCTGGCGGAGACAAGCACTGAGACATGTTTAT...CTCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAGTTCCTGAGGGAGGATTaGAAAGCCTCCAGACTTCTC +
Preference number: 4 (lower is better)
Translates to: VSARLSAAPGTSPTILQEFLRED*KASRLL
Trigger: GAGAAGTCTGGAGGCTTTGCAATCCTCCCTCAGGAA...CTCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp TGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCCTCGGCTTCTTCTATCGTCTCTGCCTGCTaGTTCCTTCCGAGTGAATTT +
Preference number: 4 (lower is better)
Translates to: WAPTARSSTPMATASASSIVSAC*FLPSEF
Trigger: AAATTCACTCGGAAGGAAGCAGCAGGCAGAGACGAT...AGAAGAAGCCGAGGCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GGTCAGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCTCTATCGTCTCTGCCTaGTGCTTCCTTCCGAGTGAA +
Preference number: 4 (lower is better)
Translates to: GQDCDQNLARCTPATAVPSIVSA*CFLPSE
Trigger: TTCACTCGGAAGGAAGCAGCAGGCAGAGACGATAGA...GGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp ATCCTCTTCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCGGCGTCTATCGTCTCTaGCTGCTGCTTCCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: ILFQPRLVQEASGSNGASGVYRL*LLLPSE
Trigger: CTCGGAAGGAAGCAGCAGGCAGAGACGATAGACGCC...GCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGAAGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp AGCTTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCTTCCCTGGGAAGGTTTaGCTGCCTTCCCACGGAATA +
Preference number: 4 (lower is better)
Translates to: SFPKHEAHGHAPSLGRFAFPGKV*LPSHGI
Trigger: TATTCCGTGGGAAGGCAGGCAAACCTTCCCAGGGAA...GGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CTACTTTCTTCCCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGGTCAACCCCACTGACTaGACAGCTGCCACGCAGGCG +
Preference number: 4 (lower is better)
Translates to: LLSSLPGITWKTPGHWGWVNPTD*TAATQA
Trigger: CGCCTGCGTGGCAGCTGTGCAGTCAGTGGGGTTGAC...CCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGGGAAGAAAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CCTCCCATCCCACCACTGCCTGGGTTCAAGGGTCAGTGCTCAAGAGTCCCACATTTCTCCCTGGTTTCCTaGCCTTGGTACACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: PPIPPLPGFKGQCSRVPHFSLVS*PWYTAL
Trigger: GAGGGCTGTGTACCAAGGGCAGGAAACCAGGGAGAA...ATGTGGGACTCTTGAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp ATTGCCCGGAGTTGGATACAAACATCCCAAGAGCTAGGGGTGCCTTTACTGGCTTGCTCGCTGCACTCCTaGCACGGCTGTGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: IARSWIQTSQELGVPLLACSLHS*HGCALS
Trigger: GGACAGGGCACAGCCGTGGCAGGAGTGCAGCGAGCA...AGCCAGTAAAGGCACCCCTAGCTCTTGGGATGTTTGTATCCAACTCCGGGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp TCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCATCCGAACAGAATCTTGCTCGCTaGACTCCTGCCACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SSPGLSRKPLGLMVQASEQNLAR*TPATAV
Trigger: CACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTG...TTCGGATGCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp AGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGAGAGAGGTAAAGGGGCACCTCTGCCTGGGCTaGACCCCAGGCCCACGGGCA +
Preference number: 4 (lower is better)
Translates to: RPFSYFTAKEMGTREVKGHLCLG*TPGPRA
Trigger: TGCCCGTGGGCCTGGGGTGCAGCCCAGGCAGAGGTG...CCCCTTTACCTCTCTCGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCTGCATGGGTATTTCACTCCCATCCCACCACTaGCTGGGTTCAAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: ALPGTQSRRLGWSCMGISLPSHH*LGSRVS
Trigger: ACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAG...TGAAATACCCATGCAGCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp AGGGAGGATTGCAAAGCCTCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTTGCAAGCATCCGAAGTaGCCACAACCAGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: REDCKASRLLQALPGTQSCKHPK*PQPGCP
Trigger: TGGGCAGCCTGGTTGTGGGCACTTCGGATGCTTGCA...ACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGAGGCTTTGCAATCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CCTCCCATCCCACCACTGCCTGGGTTCAAGGGTCAGTGCTCAAGAGTCCCACATTCTGCCACTCTCAACTaGCCTCCTGTGTCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: PPIPPLPGFKGQCSRVPHSATLN*PPVSPQ
Trigger: TTGCGGAGACACAGGAGGCCAGTTGAGAGTGGCAGA...ATGTGGGACTCTTGAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CCA 90 bp ACAGACAGGCAAAGACACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGAGTCGTTCACCTCGGTaGTGTCCGGGTAGACCTCGA +
Preference number: 4 (lower is better)
Translates to: TDRQRHRLRSQRPAPELMSRSPR*CPGRPR
Trigger: TCGAGGTCTACCCGGACACCACCGAGGTGAACGACT...CATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTGTCTTTGCCTGTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CCA 90 bp CCACTTGCATCCACCTCTGTCCACTGGACTCCCCTCCAAGCTGGCCTCGCTACCTTCCCATTCACTGTCTaGCACAGCTGTGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: PLASTSVHWTPLQAGLATFPFTV*HSCDGA
Trigger: TGCTCCATCACAGCTGTGCCAGACAGTGAATGGGAA...GGTAGCGAGGCCAGCTTGGAGGGGAGTCCAGTGGACAGAGGTGGATGCAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp GCTTCTCCCCCACCTTACCTTCCAAACCAGTCAACCCCACTGACTGCACAGCTGCACAGCCCTCTCCACTaGGCTGTCCAAGTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: ASPPPYLPNQSTPLTAQLHSPLH*AVQVKG
Trigger: TCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTG...CAGCTGTGCAGTCAGTGGGGTTGACTGGTTTGGAAGGTAAGGTGGGGGAGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CCACTTGCATCCACCTCTGTCCACTGGACTCCCCTCCAAGCTGGCCTCGCTACCAACATGGAAGACACCTaGACACTGGGGTTGGCCTTA +
Preference number: 4 (lower is better)
Translates to: PLASTSVHWTPLQAGLATNMEDT*TLGLAL
Trigger: TAAGGCCAACCCCAGTGTCCAGGTGTCTTCCATGTT...GGTAGCGAGGCCAGCTTGGAGGGGAGTCCAGTGGACAGAGGTGGATGCAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp ACGGCTGTGCCCTGTCCCCTGCGTTTGTCCCATCTGCTGCTAGCTCAAGGTCCTATCCCAGGGAAAAGCTaGCTGAGGGCTTCCCTAATG +
Preference number: 4 (lower is better)
Translates to: TAVPCPLRLSHLLLAQGPIPGKS*LRASLM
Trigger: CATTAGGGAAGCCCTCAGCCAGCTTTTCCCTGGGAT...AGGACCTTGAGCTAGCAGCAGATGGGACAAACGCAGGGGACAGGGCACAGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CAA 72 bp CCCAGGCATAACATGGAAGACACCTGGACACTGGGGTaGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: PRHNMEDTWTLG*ALAAPGTRSQD
Trigger: GTCCTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp GTGCAGTGGACAGGGAGCGCCAGCAGGTCAGGCATGAGTACAGACAGGCAAAGATTACTGGCTGGAAGGTaGCCGTTCCATTTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: VQWTGSASRSGMSTDRQRLLAGR*PFHFPN
Trigger: GTTGGGGAAATGGAACGGTCACCTTCCAGCCAGTAA...TCTTTGCCTGTCTGTACTCATGCCTGACCTGCTGGCGCTCCCTGTCCACTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp ACAAGAAGCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATTTACTGGCTGGAAGGTaGCCGTTCCATTTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: TRSPALPQPHGILRFRDHLLAGR*PFHFPN
Trigger: GTTGGGGAAATGGAACGGTCACCTTCCAGCCAGTAA...ATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp CCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCTTACTGGCTGGAAGGTaGCCGTTCCATTTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: PPRHNMEDTWTLGLALAALLAGR*PFHFPN
Trigger: GTTGGGGAAATGGAACGGTCACCTTCCAGCCAGTAA...GGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp TCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCAACCTCATGGGATCCTaGGTTTCAGGGACCATGAGA +
Preference number: 4 (lower is better)
Translates to: SRLLQALPGTQSRRLGWSNLMGS*VSGTMR
Trigger: TCTCATGGTCCCTGAAACGCAGGATCCCATGAGGTT...GCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCAGCTCACTGCCCCCTTaGTGTACTCAGCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: PPRHNMEDTWTLGLALAASSLPP*CTQLLM
Trigger: CATCAGAAGCTGAGTACAGCAAGGGGGCAGTGAGCT...GGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp TCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCTCTATCGTCTCTGCCTaGTGCTTCCTTCCGAGTGAA +
Preference number: 4 (lower is better)
Translates to: SRLLQALPGTQSRRLGWSSIVSA*CFLPSE
Trigger: TTCACTCGGAAGGAAGCAGCAGGCAGAGACGATAGA...GCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GAAGCCAGGGGCCTTTGTAGCCCCACATTGCCCGGAGTTGGATACAAACATCCCTCAGCTCCCTCCACTTaGATCCACCTCTGTCCACTG +
Preference number: 4 (lower is better)
Translates to: EARGLCSPTLPGVGYKHPSAPST*IHLCPL
Trigger: CAGTGGACAGAGGTGGATGCAAGTGGAGGGAGCTGA...GGGATGTTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAGGCCCCTGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CTACTTTCTTCCCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGCTGTGCCCTGTCCCCTaGGTTTGTCCCATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLSSLPGITWKTPGHWGWLCPVP*VCPICC
Trigger: GCAGCAGATGGGACAAACGCAGGGGACAGGGCACAG...CCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGGGAAGAAAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp AGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGAGAGAGGTAAAGGGGCCCTCCATCCACCTCTaGCTGGGCTGCACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RPFSYFTAKEMGTREVKGPSIHL*LGCTPG
Trigger: GCCTGGGGTGCAGCCCAGGCAGAGGTGGATGGAGGG...CCCCTTTACCTCTCTCGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp GCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCTGCATGGGTATTTCAACCCTCTTTCCTGTCTaGAAGGCCAGTCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: ALPGTQSRRLGWSCMGISTLFPV*KASPAW
Trigger: CCAAGCAGGACTGGCCTTCCAGACAGGAAAGAGGGT...TGAAATACCCATGCAGCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CCA 90 bp TCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCATCCGAACGGTCTTGCTGCTCTTaGACTCCATGGGGAACAGTG +
Preference number: 4 (lower is better)
Translates to: SSPGLSRKPLGLMVQASERSCCS*TPWGTV
Trigger: CACTGTTCCCCATGGAGTCCAAGAGCAGCAAGACCG...TTCGGATGCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CCA 90 bp ATCCTGCGTTTCAGGGACCATGAGAATAAACATGTCTCAGTGCTTGTCTCCGCCAGGAGGCGGAGGGGGTaGACTGAGGGCCAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: ILRFRDHENKHVSVLVSARRRRG*TEGQAH
Trigger: GTGAGCTTGGCCCTCAGTCCACCCCCTCCGCCTCCT...GGCGGAGACAAGCACTGAGACATGTTTATTCTCATGGTCCCTGAAACGCAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CCCATGACTGTGCCTGAGTTCCAAGGGGACAGAGCCCATCCCTGCATCCTGCCTTCCTTTGCTCTGATTTaGCCAATGCAGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PMTVPEFQGDRAHPCILPSFALI*PMQAAE
Trigger: CTCAGCTGCCTGCATTGGCCAAATCAGAGCAAAGGA...AGGCAGGATGCAGGGATGGGCTCTGTCCCCTTGGAACTCAGGCACAGTCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp GCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGCGGTTTCCCAGATCCTTTGCTCTGATTTaGCCAATGCAGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ASPSHCAPELRDFLRFPRSFALI*PMQAAE
Trigger: CTCAGCTGCCTGCATTGGCCAAATCAGAGCAAAGGA...TCTGGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp TCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCTCCTTTGCTCTGATTTaGCCAATGCAGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SRLLQALPGTQSRRLGWSSFALI*PMQAAE
Trigger: CTCAGCTGCCTGCATTGGCCAAATCAGAGCAAAGGA...GCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp AGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAAACATGGAAGACACCTaGACACTGGGGTTGGCCTTA +
Preference number: 4 (lower is better)
Translates to: SLGKAFSRPWHFSHHPPRNMEDT*TLGLAL
Trigger: TAAGGCCAACCCCAGTGTCCAGGTGTCTTCCATGTT...TCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CTCCTTCGTGTGCCTCGCCGATGCCCTGCACTTTTCCTAGTGCACCCTCATCAGATCCCAGGGAAAAGCTaGCTGAGGGCTTCCCTAATG +
Preference number: 4 (lower is better)
Translates to: LLRVPRRCPALFLVHPHQIPGKS*LRASLM
Trigger: CATTAGGGAAGCCCTCAGCCAGCTTTTCCCTGGGAT...CTGATGAGGGTGCACTAGGAAAAGTGCAGGGCATCGGCGAGGCACACGAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp GCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGCGGTTTCCCAGAGGTGCCTTTACTGGCTaGAAGGTGACCGTTCCATTT +
Preference number: 4 (lower is better)
Translates to: ASPSHCAPELRDFLRFPRGAFTG*KVTVPF
Trigger: AAATGGAACGGTCACCTTCCAGCCAGTAAAGGCACC...TCTGGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGCACACATTGCCCGGAGTTaGATACAAACATCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: PSSKRLNDSSVQPRISLAHIARS*IQTSQE
Trigger: CTCTTGGGATGTTTGTATCCAACTCCGGGCAATGTG...TGCGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp AGTGAGTCCTCCCAACCTGGGACAATTTTGCATAAGCCCTTCCTGCTAGGTGTCCAGACACAAGGGCTCTaGGCGGGGTCACATCGTGGA +
Preference number: 4 (lower is better)
Translates to: SESSQPGTILHKPFLLGVQTQGL*AGSHRG
Trigger: TCCACGATGTGACCCCGCTCAGAGCCCTTGTGTCTG...GACACCTAGCAGGAAGGGCTTATGCAAAATTGTCCCAGGTTGGGAGGACTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp AGGGAGGATTGCAAAGCCTCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTAACTCCTTTCTCCTCTaGCACTCTCAACTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: REDCKASRLLQALPGTQSNSFLL*HSQLAS
Trigger: GGAGGCCAGTTGAGAGTGGCAGAGGAGAAAGGAGTT...ACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGAGGCTTTGCAATCCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR GCA 90 bp GAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGATAAACATGTCTCAGTaGTTGTCTCCGCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: EDTWTLGLALAAPGTRSQINMSQ*LSPPAA
Trigger: GGCTGCTGGCGGAGACAAGCACTGAGACATGTTTAT...CTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp TCCCACGGAATAGCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGAACCTCATGGGATCCTaGGTTTCAGGGACCATGAGA +
Preference number: 4 (lower is better)
Translates to: SHGIASPSHCAPELRDFLNLMGS*VSGTMR
Trigger: TCTCATGGTCCCTGAAACGCAGGATCCCATGAGGTT...CAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGCTATTCCGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GAAGCCAGGGGCCTTTGTAGCCCCACATTGCCCGGAGTTGGATACAAACATCCCAGCTCACTGCCCCCTTaGTGTACTCAGCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: EARGLCSPTLPGVGYKHPSSLPP*CTQLLM
Trigger: CATCAGAAGCTGAGTACAGCAAGGGGGCAGTGAGCT...GGGATGTTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAGGCCCCTGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp AGCTTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCAGGCTGGGCTGGAGCTaGATGGGTATTTCATTGAAA +
Preference number: 4 (lower is better)
Translates to: SFPKHEAHGHAPSLGRFARLGWS*MGISLK
Trigger: TTTCAATGAAATACCCATGCAGCTCCAGCCCAGCCT...GGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp AGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCTGTCAGGCTGGGCTGGAGCTaGATGGGTATTTCATTGAAA +
Preference number: 4 (lower is better)
Translates to: RTVTRILLAALLPRLCPVRLGWS*MGISLK
Trigger: TTTCAATGAAATACCCATGCAGCTCCAGCCCAGCCT...GACAGGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCTGCATGGGTATTTCAGACTTCTCCAGGCCCTaGCAGGGACACAAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: ALPGTQSRRLGWSCMGISDFSRP*QGHKVE
Trigger: TTCTACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTC...TGAAATACCCATGCAGCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp ACGGCTGTGCCCTGTCCCCTGCGTTTGTCCCATCTGCTGCTAGCTCAAGGTCCTATCGTCTCTGCCTGCTaGTTCCTTCCGAGTGAATTT +
Preference number: 4 (lower is better)
Translates to: TAVPCPLRLSHLLLAQGPIVSAC*FLPSEF
Trigger: AAATTCACTCGGAAGGAAGCAGCAGGCAGAGACGAT...AGGACCTTGAGCTAGCAGCAGATGGGACAAACGCAGGGGACAGGGCACAGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GTGCAGTGGACAGGGAGCGCCAGCAGGTCAGGCATGAGTACAGACAGGCAAAGATCTATCGTCTCTGCCTaGTGCTTCCTTCCGAGTGAA +
Preference number: 4 (lower is better)
Translates to: VQWTGSASRSGMSTDRQRSIVSA*CFLPSE
Trigger: TTCACTCGGAAGGAAGCAGCAGGCAGAGACGATAGA...TCTTTGCCTGTCTGTACTCATGCCTGACCTGCTGGCGCTCCCTGTCCACTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GAAGCCAGGGGCCTTTGTAGCCCCACATTGCCCGGAGTTGGATACAAACATCCCTTCCCTGGGAAGGTTTaGCTGCCTTCCCACGGAATA +
Preference number: 4 (lower is better)
Translates to: EARGLCSPTLPGVGYKHPFPGKV*LPSHGI
Trigger: TATTCCGTGGGAAGGCAGGCAAACCTTCCCAGGGAA...GGGATGTTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAGGCCCCTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp ACAGACAGGCAAAGACACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGGGGTTCAAGGGTCAGTaGTCAAGAGTCCCACATGGT +
Preference number: 4 (lower is better)
Translates to: TDRQRHRLRSQRPAPELMGFKGQ*SRVPHG
Trigger: ACCATGTGGGACTCTTGAGCACTGACCCTTGAACCC...CATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTGTCTTTGCCTGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp AGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGATTTGTAGCCCCACATTaGCCGGAGTTGGATACAAAC +
Preference number: 4 (lower is better)
Translates to: SLGKAFSRPWHFSHHPPRFVAPH*PELDTN
Trigger: GTTTGTATCCAACTCCGGGCAATGTGGGGCTACAAA...TCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp ACGGCTGTGCCCTGTCCCCTGCGTTTGTCCCATCTGCTGCTAGCTCAAGGTCCTTTTGTAGCCCCACATTaGCCGGAGTTGGATACAAAC +
Preference number: 4 (lower is better)
Translates to: TAVPCPLRLSHLLLAQGPFVAPH*PELDTN
Trigger: GTTTGTATCCAACTCCGGGCAATGTGGGGCTACAAA...AGGACCTTGAGCTAGCAGCAGATGGGACAAACGCAGGGGACAGGGCACAGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CTACTTTCTTCCCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGAGTCGTTCACCTCGGTaGTGTCCGGGTAGACCTCGA +
Preference number: 4 (lower is better)
Translates to: LLSSLPGITWKTPGHWGWSRSPR*CPGRPR
Trigger: TCGAGGTCTACCCGGACACCACCGAGGTGAACGACT...CCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGGGAAGAAAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CCA 90 bp CCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCAGTAGAAGGCTGGGCTaGAGCTGCATGGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: PPRHNMEDTWTLGLALAASRRLG*SCMGIS
Trigger: TGAAATACCCATGCAGCTCCAGCCCAGCCTTCTACT...GGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp TTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGGACCCTCTCTCTTCCAAGGCCAGTAGAAGGCTGGGCTaGAGCTGCATGGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: LALAAPGTRSQDPLSSKASRRLG*SCMGIS
Trigger: TGAAATACCCATGCAGCTCCAGCCCAGCCTTCTACT...GGCCTTGGAAGAGAGAGGGTCCTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CCTCCCATCCCACCACTGCCTGGGTTCAAGGGTCAGTGCTCAAGAGTCCCACATTTCCCATTCACTGTCTaGCACAGCTGTGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: PPIPPLPGFKGQCSRVPHFPFTV*HSCDGA
Trigger: TGCTCCATCACAGCTGTGCCAGACAGTGAATGGGAA...ATGTGGGACTCTTGAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp AGTGAGTCCTCCCAACCTGGGACAATTTTGCATAAGCCCTTCCTGCTAGGTGTCTCCACCTCTGTCCACTaGACTCCCCTCCAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SESSQPGTILHKPFLLGVSTSVH*TPLQAG
Trigger: GCCAGCTTGGAGGGGAGTCCAGTGGACAGAGGTGGA...GACACCTAGCAGGAAGGGCTTATGCAAAATTGTCCCAGGTTGGGAGGACTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp CTCCTTCGTGTGCCTCGCCGATGCCCTGCACTTTTCCTAGTGCACCCTCATCAGGGTGCCTTTACTGGCTaGAAGGTGACCGTTCCATTT +
Preference number: 4 (lower is better)
Translates to: LLRVPRRCPALFLVHPHQGAFTG*KVTVPF
Trigger: AAATGGAACGGTCACCTTCCAGCCAGTAAAGGCACC...CTGATGAGGGTGCACTAGGAAAAGTGCAGGGCATCGGCGAGGCACACGAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp ACGGCTGTGCCCTGTCCCCTGCGTTTGTCCCATCTGCTGCTAGCTCAAGGTCCTCACATTGCCCGGAGTTaGATACAAACATCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: TAVPCPLRLSHLLLAQGPHIARS*IQTSQE
Trigger: CTCTTGGGATGTTTGTATCCAACTCCGGGCAATGTG...AGGACCTTGAGCTAGCAGCAGATGGGACAAACGCAGGGGACAGGGCACAGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp CCTCCCATCCCACCACTGCCTGGGTTCAAGGGTCAGTGCTCAAGAGTCCCACATCTCCATTCAGGTCATTaGGAAGCTTCTTGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: PPIPPLPGFKGQCSRVPHLHSGH*EASCLA
Trigger: TGCGAGACAAGAAGCTTCTCAATGACCTGAATGGAG...ATGTGGGACTCTTGAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp AGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGAGAGAGGTAAAGGGGCAAGGTCCTCCCTTCTaGGGCACCCCACGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RPFSYFTAKEMGTREVKGQGPPF*GTPRLQ
Trigger: CTGGAGACGTGGGGTGCCTCAGAAGGGAGGACCTTG...CCCCTTTACCTCTCTCGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp CTACTTTCTTCCCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGTCTGGGTCAGGACTGTaGCCAGAATCTTGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: LLSSLPGITWKTPGHWGWSGSGL*PESCSL
Trigger: CAGCGAGCAAGATTCTGGTCACAGTCCTGACCCAGA...CCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGGGAAGAAAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp AATGTCAAATGTCTGCCAGGCACTGTGCAAAATCACATAAAAATGAGGTGGGAGTCTCGGCTAGGTGCTTaGAGGCAGGGGGCGCGCCGG +
Preference number: 4 (lower is better)
Translates to: NVKCLPGTVQNHIKMRWESRLGA*RQGARR
Trigger: CCGGCGCGCCCCCTGCCTGCAAGCACCTAGCCGAGA...CTCCCACCTCATTTTTATGTGATTTTGCACAGTGCCTGGCAGACATTTGACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR GCA 90 bp ATCCTGCGTTTCAGGGACCATGAGAATAAACATGTCTCAGTGCTTGTCTCCGCCCAGCCGGGCCGTCTTTaGATCCTCCACGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: ILRFRDHENKHVSVLVSAQPGRL*ILHGSI
Trigger: AATGGAGCCGTGGAGGATGCAAAGACGGCCCGGCTG...GGCGGAGACAAGCACTGAGACATGTTTATTCTCATGGTCCCTGAAACGCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp ATCCTGCGTTTCAGGGACCATGAGAATAAACATGTCTCAGTGCTTGTCTCCGCCCAGGACAAGAAGCCCTaGCCTGCCCCAACCTCATGG +
Preference number: 4 (lower is better)
Translates to: ILRFRDHENKHVSVLVSAQDKKP*PAPTSW
Trigger: CCATGAGGTTGGGGCAGGGCAGGGCTTCTTGTCCTG...GGCGGAGACAAGCACTGAGACATGTTTATTCTCATGGTCCCTGAAACGCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp ATCCTGCGTTTCAGGGACCATGAGAATAAACATGTCTCAGTGCTTGTCTCCGCCGAGGGCCAAGCTCACTaGCCCCTTGCTGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: ILRFRDHENKHVSVLVSAEGQAH*PLAVLS
Trigger: GCTGAGTACAGCAAGGGGGCAGTGAGCTTGGCCCTC...GGCGGAGACAAGCACTGAGACATGTTTATTCTCATGGTCCCTGAAACGCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GAAGCCAGGGGCCTTTGTAGCCCCACATTGCCCGGAGTTGGATACAAACATCCCTTCCTGAGGGAGGATTaGAAAGCCTCCAGACTTCTC +
Preference number: 4 (lower is better)
Translates to: EARGLCSPTLPGVGYKHPFLRED*KASRLL
Trigger: GAGAAGTCTGGAGGCTTTGCAATCCTCCCTCAGGAA...GGGATGTTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAGGCCCCTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp CGCACGCTGTCGGTCTTGCTGCTCTTGGACTCCATGGGGAACAGTGTGGGCGCCATTTGTGGTTTCCTTTaGTCTGATTTGGCCAATGCA +
Preference number: 4 (lower is better)
Translates to: RTLSVLLLLDSMGNSVGAICGFL*SDLANA
Trigger: TGCATTGGCCAAATCAGAGCAAAGGAAACCACAAAT...GGCGCCCACACTGTTCCCCATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382123.1
CDS-3UTR GCA 90 bp ATTGCCCGGAGTTGGATACAAACATCCCAAGAGCTAGGGGTGCCTTTACTGGCTCACCCTCCCTTCCTCTaGAGGTTTCTGGGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: IARSWIQTSQELGVPLLAHPPFL*RFLGQD
Trigger: GTCCTGACCCAGAAACCTGCAGAGGAAGGGAGGGTG...AGCCAGTAAAGGCACCCCTAGCTCTTGGGATGTTTGTATCCAACTCCGGGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATGAGAATATTTGTAGCCCCACATTaGCCGGAGTTGGATACAAAC +
Preference number: 4 (lower is better)
Translates to: ALPCPNLMGSCVSGTMRIFVAPH*PELDTN
Trigger: GTTTGTATCCAACTCCGGGCAATGTGGGGCTACAAA...TATTCTCATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp AGGGAGGATTGCAAAGCCTCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTTTCCCATTCACTGTCTaGCACAGCTGTGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: REDCKASRLLQALPGTQSFPFTV*HSCDGA
Trigger: TGCTCCATCACAGCTGTGCCAGACAGTGAATGGGAA...ACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGAGGCTTTGCAATCCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp TTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGGACCCTCTCTCTTCCAAGGCCCACATAAAAATGAGGTaGGAGGAGTGCAGTGGACAG +
Preference number: 4 (lower is better)
Translates to: LALAAPGTRSQDPLSSKAHIKMR*EECSGQ
Trigger: CTGTCCACTGCACTCCTCCCACCTCATTTTTATGTG...GGCCTTGGAAGAGAGAGGGTCCTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
3UTR CAA 72 bp GGAGCACAGAGTGAGTCCTCCCAACCTGGGACAATTTaGCATAAGCCCTTCCTGCTAGGTGTCAGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: GAQSESSQPGTI*HKPFLLGVRSK
Trigger: CTTGGACCTGACACCTAGCAGGAAGGGCTTATGCAAAATTGTCCCAGGTTGGGAGGACTCACTCTGTGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp TCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCATCCGAACTCCATTCAGGTCATTaGGAAGCTTCTTGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: SSPGLSRKPLGLMVQASELHSGH*EASCLA
Trigger: TGCGAGACAAGAAGCTTCTCAATGACCTGAATGGAG...TTCGGATGCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp TCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCATCCGAAAGGCTGGGCTGGAGCTaGATGGGTATTTCATTGAAA +
Preference number: 4 (lower is better)
Translates to: SSPGLSRKPLGLMVQASERLGWS*MGISLK
Trigger: TTTCAATGAAATACCCATGCAGCTCCAGCCCAGCCT...TTCGGATGCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp AGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGAGAGAGGTAAAGGGGATTGTGGACTGCACATaGCATGGGCCGTCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: RPFSYFTAKEMGTREVKGIVDCT*HGPSGR
Trigger: GCGCCCTGACGGCCCATGGCATGTGCAGTCCACAAT...CCCCTTTACCTCTCTCGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp ATTGCCCGGAGTTGGATACAAACATCCCAAGAGCTAGGGGTGCCTTTACTGGCTTTCTCCCTGGTTTCCTaGCCTTGGTACACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: IARSWIQTSQELGVPLLAFSLVS*PWYTAL
Trigger: GAGGGCTGTGTACCAAGGGCAGGAAACCAGGGAGAA...AGCCAGTAAAGGCACCCCTAGCTCTTGGGATGTTTGTATCCAACTCCGGGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp ATCCTCTTCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCCACATTGCCCGGAGTTaGATACAAACATCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: ILFQPRLVQEASGSNGASHIARS*IQTSQE
Trigger: CTCTTGGGATGTTTGTATCCAACTCCGGGCAATGTG...GCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGAAGAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp ATCCTCTTCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCCACATAAAAATGAGGTaGGAGGAGTGCAGTGGACAG +
Preference number: 4 (lower is better)
Translates to: ILFQPRLVQEASGSNGASHIKMR*EECSGQ
Trigger: CTGTCCACTGCACTCCTCCCACCTCATTTTTATGTG...GCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGAAGAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp AATGTCAAATGTCTGCCAGGCACTGTGCAAAATCACATAAAAATGAGGTGGGAGCCGGGTAGACCTCGATaGCGGTCGTGGGGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: NVKCLPGTVQNHIKMRWEPGRPR*RSWGWS
Trigger: TGACCAACCCCACGACCGTCATCGAGGTCTACCCGG...CTCCCACCTCATTTTTATGTGATTTTGCACAGTGCCTGGCAGACATTTGACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR TCA 90 bp AGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGAGAGAGGTAAAGGGGGCTGTACTCAGCTTCTaGTGGCCTTGCTGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: RPFSYFTAKEMGTREVKGAVLSF*WPCCPV
Trigger: AACTGGGCAGCAAGGCCATCAGAAGCTGAGTACAGC...CCCCTTTACCTCTCTCGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp AGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGAGAGAGGTAAAGGGGCCAGCAGGTCAGGCATaGGTACAGACAGGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: RPFSYFTAKEMGTREVKGPAGQA*VQTGKD
Trigger: GTCTTTGCCTGTCTGTACTCATGCCTGACCTGCTGG...CCCCTTTACCTCTCTCGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GATTATAGAAGTGAAAGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGTGCTCGCTGCACTCCTaGCACGGCTGTGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: DYRSERPFSYFTAKEMGTCSLHS*HGCALS
Trigger: GGACAGGGCACAGCCGTGGCAGGAGTGCAGCGAGCA...CGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCTTTCACTTCTATAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp AGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGAGAGAGGTAAAGGGGTCTGCCACTCTCAACTaGCCTCCTGTGTCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: RPFSYFTAKEMGTREVKGSATLN*PPVSPQ
Trigger: TTGCGGAGACACAGGAGGCCAGTTGAGAGTGGCAGA...CCCCTTTACCTCTCTCGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR TCA 90 bp GATTATAGAAGTGAAAGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGTTCCCACTGCGCACCTaGGCTGCGGGATTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: DYRSERPFSYFTAKEMGTFPLRT*AAGFPA
Trigger: CGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAA...CGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCTTTCACTTCTATAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp AGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGAGAGAGGTAAAGGGGGACTTCTCCAGGCCCTaGCAGGGACACAAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: RPFSYFTAKEMGTREVKGDFSRP*QGHKVE
Trigger: TTCTACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTC...CCCCTTTACCTCTCTCGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp AATGTCAAATGTCTGCCAGGCACTGTGCAAAATCACATAAAAATGAGGTGGGAGCATCCCACCACTGCCTaGGTTCAAGGGTCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: NVKCLPGTVQNHIKMRWEHPTTA*VQGSVL
Trigger: GAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATG...CTCCCACCTCATTTTTATGTGATTTTGCACAGTGCCTGGCAGACATTTGACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp ATCCTGCGTTTCAGGGACCATGAGAATAAACATGTCTCAGTGCTTGTCTCCGCCCACATAAAAATGAGGTaGGAGGAGTGCAGTGGACAG +
Preference number: 4 (lower is better)
Translates to: ILRFRDHENKHVSVLVSAHIKMR*EECSGQ
Trigger: CTGTCCACTGCACTCCTCCCACCTCATTTTTATGTG...GGCGGAGACAAGCACTGAGACATGTTTATTCTCATGGTCCCTGAAACGCAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp AGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGAGAGAGGTAAAGGGGCTCCATTCAGGTCATTaGGAAGCTTCTTGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: RPFSYFTAKEMGTREVKGLHSGH*EASCLA
Trigger: TGCGAGACAAGAAGCTTCTCAATGACCTGAATGGAG...CCCCTTTACCTCTCTCGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR TCA 90 bp AATGTCAAATGTCTGCCAGGCACTGTGCAAAATCACATAAAAATGAGGTGGGAGCCAGCAGGTCAGGCATaGGTACAGACAGGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: NVKCLPGTVQNHIKMRWEPAGQA*VQTGKD
Trigger: GTCTTTGCCTGTCTGTACTCATGCCTGACCTGCTGG...CTCCCACCTCATTTTTATGTGATTTTGCACAGTGCCTGGCAGACATTTGACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp AATGTCAAATGTCTGCCAGGCACTGTGCAAAATCACATAAAAATGAGGTGGGAGTCCCACATTGTGGACTaGACATGCCATGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: NVKCLPGTVQNHIKMRWESHIVD*TCHGPS
Trigger: TGACGGCCCATGGCATGTGCAGTCCACAATGTGGGA...CTCCCACCTCATTTTTATGTGATTTTGCACAGTGCCTGGCAGACATTTGACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GATTATAGAAGTGAAAGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGGATGATGCAGGAGGCTaGCAGGGCAGAACTGGTGAT +
Preference number: 4 (lower is better)
Translates to: DYRSERPFSYFTAKEMGTDDAGG*QGRTGD
Trigger: ATCACCAGTTCTGCCCTGGCAGCCTCCTGCATCATC...CGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCTTTCACTTCTATAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CCA 90 bp AATGTCAAATGTCTGCCAGGCACTGTGCAAAATCACATAAAAATGAGGTGGGAGCACAAAGTAGAAGGCTaGGCTGGAGCTGCATGGGTA +
Preference number: 4 (lower is better)
Translates to: NVKCLPGTVQNHIKMRWEHKVEG*AGAAWV
Trigger: TACCCATGCAGCTCCAGCCCAGCCTTCTACTTTGTG...CTCCCACCTCATTTTTATGTGATTTTGCACAGTGCCTGGCAGACATTTGACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp AGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGAGAGAGGTAAAGGGGATTTGTGGTTTCCTTTaGTCTGATTTGGCCAATGCA +
Preference number: 4 (lower is better)
Translates to: RPFSYFTAKEMGTREVKGICGFL*SDLANA
Trigger: TGCATTGGCCAAATCAGAGCAAAGGAAACCACAAAT...CCCCTTTACCTCTCTCGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR GCA 90 bp GATTATAGAAGTGAAAGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGATTTGTGGTTTCCTTTaGTCTGATTTGGCCAATGCA +
Preference number: 4 (lower is better)
Translates to: DYRSERPFSYFTAKEMGTICGFL*SDLANA
Trigger: TGCATTGGCCAAATCAGAGCAAAGGAAACCACAAAT...CGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCTTTCACTTCTATAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS TCA 90 bp GGCCCTGGGCCTACAAGCGACTCCTCGGCGCGCGGCCGGACCCCCTaGGCCTCGGTGCGCGCGTCCTTCCGCCGTCCCGCGGGCCGCTGT +
Preference number: 5 (lower is better)
Translates to: GPGPTSDSSARGRTP*ASVRASFRRPAGRC
Trigger: ACAGCGGCCCGCGGGACGGCGGAAGGACGCGCGCACCGAGGCTCAGGGGGTCCGGCCGCGCGCCGAGGAGTCGCTTGTAGGCCCAGGGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382123.1
CDS GCA 90 bp GGGCAAGCGACTCCTCGGCGCGCGGCCGGACCCCCTGAGCCTCGGTaGGCGCGTCCTTCCGCCGTCCCGCGGGCCGCTGTCTGTCCACTG +
Preference number: 5 (lower is better)
Translates to: GQATPRRAAGPPEPR*ARPSAVPRAAVCPL
Trigger: CAGTGGACAGACAGCGGCCCGCGGGACGGCGGAAGGACGCGCGCACCGAGGCTCAGGGGGTCCGGCCGCGCGCCGAGGAGTCGCTTGCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486852.1
CDS TCA 90 bp GCCTCCTCACCTACAAGCGACTCCTCGGCGCGCGGCCGGACCCCCTaGGCCTCGGTGCGCGCGTCCTTCCGCCGTCCCGCGGGCCGCTGT +
Preference number: 5 (lower is better)
Translates to: ASSPTSDSSARGRTP*ASVRASFRRPAGRC
Trigger: ACAGCGGCCCGCGGGACGGCGGAAGGACGCGCGCACCGAGGCTCAGGGGGTCCGGCCGCGCGCCGAGGAGTCGCTTGTAGGTGAGGAGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482459.1
CDS TCA 90 bp GGTGCGCGCGTCCTTCCGCCGTCCCGCGGGCCGCTGTCTGTCCACTaGTCCGCCTCCCAGCGGCCCAACCTTGAGGGGGTGGGGAGCGCG +
Preference number: 5 (lower is better)
Translates to: GARVLPPSRGPLSVH*SASQRPNLEGVGSA
Trigger: CGCGCTCCCCACCCCCTCAAGGTTGGGCCGCTGGGAGGCGGATCAGTGGACAGACAGCGGCCCGCGGGACGGCGGAAGGACGCGCGCACC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486852.1
CDS GCA 90 bp CTACAAGCGACTCCTCGGCGCGCGGCCGGACCCCCTGAGCCTCGGTaGGCGCGTCCTTCCGCCGTCCCGCGGGCCGCTGTCTGTCCACTG +
Preference number: 5 (lower is better)
Translates to: LQATPRRAAGPPEPR*ARPSAVPRAAVCPL
Trigger: CAGTGGACAGACAGCGGCCCGCGGGACGGCGGAAGGACGCGCGCACCGAGGCTCAGGGGGTCCGGCCGCGCGCCGAGGAGTCGCTTGTAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382123.1
CDS CCA 90 bp GCCAGCACCCACCCTCACGCCCAGCAGCTCCGAGAACAGCCCCAGTaGAGACGGAAATCCCTGCGGGGGCCGCCAGCTGCCAGCCTGCCA +
Preference number: 5 (lower is better)
Translates to: ASTHPHAQQLREQPQ*RRKSLRGPPAASLP
Trigger: TGGCAGGCTGGCAGCTGGCGGCCCCCGCAGGGATTTCCGTCTCCACTGGGGCTGTTCTCGGAGCTGCTGGGCGTGAGGGTGGGTGCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482459.1
CDS-3UTR CAA 90 bp GGGCAGGGACACAGACGCTGGAAGCCAGGGTGCAGCAGCGAGGGGAGAAGCCCCCAAGCGAAGCAGCCCTaGGGCGAACCTGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: GQGHRRWKPGCSSEGRSPQAKQP*GEPAGG
Trigger: GCCCCCGGCAGGTTCGCCCAAGGGCTGCTTCGCTTG...GGGGCTTCTCCCCTCGCTGCTGCACCCTGGCTTCCAGCGTCTGTGTCCCTGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS GCA 90 bp CCCAAACAACCCCGCACACACGGGGCGCCGGACCCACAGCGACGCTaGCTCAGCCGCCAACCGGCAGAGCTAGCAGAGCGGCCAAAGCAC +
Preference number: 5 (lower is better)
Translates to: PKQPRTHGAPDPQRR*LSRQPAELAERPKH
Trigger: GTGCTTTGGCCGCTCTGCTAGCTCTGCCGGTTGGCGGCTGAGGCAGCGTCGCTGTGGGTCCGGCGCCCCGTGTGTGCGGGGTTGTTTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482459.1
CDS CCA 90 bp CGCCGGCAGCCCGCACGCTGTCGGTCTTGCTGCTCTTGGACTCCATaGGGAACAGTGTGGGCGCCATCGGGGGAGAGGCCGAGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: RRQPARCRSCCSWTP*GTVWAPSGERPRAQ
Trigger: CTGAGCCCTCGGCCTCTCCCCCGATGGCGCCCACACTGTTCCCCATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGCGGGCTGCCGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000482459.1
CDS-3UTR CAA 90 bp CTGCATCCTGCCTCCCACATTGTGGACTGCACATGCCATGGGCCGTCAGGGCGCGAAGGCCAGTCCTGCTaGGGGTCCTGTCTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: LHPASHIVDCTCHGPSGREGQSC*GSCLPA
Trigger: GGCAGGCAGACAGGACCCCAAGCAGGACTGGCCTTC...GCGCCCTGACGGCCCATGGCATGTGCAGTCCACAATGTGGGAGGCAGGATGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CAA 90 bp TTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCTGCTTCTCGGCTAGGTGCTaGCAGGCAGGGGGCGCGCCG +
Preference number: 5 (lower is better)
Translates to: FPKHEAHGHAPSLGRFACFSARC*QAGGAP
Trigger: CGGCGCGCCCCCTGCCTGCAAGCACCTAGCCGAGAA...GCAGGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CAA 90 bp GGGCAGGGACACAGACGCTGGAAGCCAGGGTGCAGCAGCGAGGGGAGAAGCCCCAACATGTCTCAGTGCTaGTCTCCGCCAGCAGCCGTG +
Preference number: 5 (lower is better)
Translates to: GQGHRRWKPGCSSEGRSPNMSQC*SPPAAV
Trigger: CACGGCTGCTGGCGGAGACAAGCACTGAGACATGTT...GGGGCTTCTCCCCTCGCTGCTGCACCCTGGCTTCCAGCGTCTGTGTCCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp GTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAGGTCCCCTGCAGTCTGTaGGGACACAGCACCCGGGGC +
Preference number: 5 (lower is better)
Translates to: VSARLSAAPGTSPTILQEVPCSL*GHSTRG
Trigger: GCCCCGGGTGCTGTGTCCCAACAGACTGCAGGGGAC...CTCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp GAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGCAAGCGAAGCAGCCCTaGGGCGAACCTGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: EDTWTLGLALAAPGTRSQQAKQP*GEPAGG
Trigger: GCCCCCGGCAGGTTCGCCCAAGGGCTGCTTCGCTTG...CTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CAA 90 bp CTCCTTCGTGTGCCTCGCCGATGCCCTGCACTTTTCCTAGTGCACCCTCATCAGTTCTCGGCTAGGTGCTaGCAGGCAGGGGGCGCGCCG +
Preference number: 5 (lower is better)
Translates to: LLRVPRRCPALFLVHPHQFSARC*QAGGAP
Trigger: CGGCGCGCCCCCTGCCTGCAAGCACCTAGCCGAGAA...CTGATGAGGGTGCACTAGGAAAAGTGCAGGGCATCGGCGAGGCACACGAAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CAA 90 bp CGCGCCGGCAGCCCGCACGCTGTCGGTCTTGCTGCTCTTGGACTCCATGGGGAACTCAGCTCCCTCCACTaGCATCCACCTCTGTCCACT +
Preference number: 5 (lower is better)
Translates to: RAGSPHAVGLAALGLHGELSSLH*HPPLST
Trigger: AGTGGACAGAGGTGGATGCAAGTGGAGGGAGCTGAG...TTCCCCATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGCGGGCTGCCGGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382123.1
CDS-3UTR CAA 90 bp GGGCAGGGACACAGACGCTGGAAGCCAGGGTGCAGCAGCGAGGGGAGAAGCCCCACTGTGACCAGAATCTaGCTCGCTGCACTCCTGCCA +
Preference number: 5 (lower is better)
Translates to: GQGHRRWKPGCSSEGRSPTVTRI*LAALLP
Trigger: TGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGT...GGGGCTTCTCCCCTCGCTGCTGCACCCTGGCTTCCAGCGTCTGTGTCCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp TTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCTGCGAAGGCCAGTCCTGCTaGGGGTCCTGTCTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: FPKHEAHGHAPSLGRFACEGQSC*GSCLPA
Trigger: GGCAGGCAGACAGGACCCCAAGCAGGACTGGCCTTC...GCAGGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CAA 90 bp GCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGCGGTTTCCCAGATGCAGGGCAGGGGGCTaGGACACGCAAGCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: ASPSHCAPELRDFLRFPRCRAGG*DTQAKQ
Trigger: CTGCTTCGCTTGCGTGTCCAAGCCCCCTGCCCTGCA...TCTGGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CAA 90 bp GGGCAGGGACACAGACGCTGGAAGCCAGGGTGCAGCAGCGAGGGGAGAAGCCCCAAGCTCACTGCCCCCTaGCTGTACTCAGCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: GQGHRRWKPGCSSEGRSPKLTAP*LYSASD
Trigger: ATCAGAAGCTGAGTACAGCAAGGGGGCAGTGAGCTT...GGGGCTTCTCCCCTCGCTGCTGCACCCTGGCTTCCAGCGTCTGTGTCCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp TTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGGACCCTCTCTCTTCCAAGGCCGTCCCCTGCAGTCTGTaGGGACACAGCACCCGGGGC +
Preference number: 5 (lower is better)
Translates to: LALAAPGTRSQDPLSSKAVPCSL*GHSTRG
Trigger: GCCCCGGGTGCTGTGTCCCAACAGACTGCAGGGGAC...GGCCTTGGAAGAGAGAGGGTCCTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp CCTCCCATCCCACCACTGCCTGGGTTCAAGGGTCAGTGCTCAAGAGTCCCACATGTCCCCTGCAGTCTGTaGGGACACAGCACCCGGGGC +
Preference number: 5 (lower is better)
Translates to: PPIPPLPGFKGQCSRVPHVPCSL*GHSTRG
Trigger: GCCCCGGGTGCTGTGTCCCAACAGACTGCAGGGGAC...ATGTGGGACTCTTGAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp CCATCTGCTGCTAGCTCAAGGTCCTCCCTTCTGAGGCACCCCACGTCTCCAGCCACCTGGACACTGGGGTaGGCCTTAGCTGCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: PSAASSRSSLLRHPTSPATWTLG*ALAAPG
Trigger: TCCTGGGGCAGCTAAGGCCAACCCCAGTGTCCAGGT...GGCTGGAGACGTGGGGTGCCTCAGAAGGGAGGACCTTGAGCTAGCAGCAGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp CGGTTTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCATCGGTCTTGCTGCTCTaGGACTCCATGGGGAACAGT +
Preference number: 5 (lower is better)
Translates to: RFPRPAGHPQREAPHPWPSVLLL*DSMGNS
Trigger: ACTGTTCCCCATGGAGTCCAAGAGCAGCAAGACCGA...TGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CAA 90 bp TTCCCAGACCAGCTGGGCACCCACAGCGCGAAGCTCCACACCCATGGCCACTGCATGACGGTCGTGGGGTaGGTCATCGTCTTCTTCTCG +
Preference number: 5 (lower is better)
Translates to: FPDQLGTHSAKLHTHGHCMTVVG*VIVFFS
Trigger: CGAGAAGAAGACGATGACCAACCCCACGACCGTCAT...GCAGTGGCCATGGGTGTGGAGCTTCGCGCTGTGGGTGCCCAGCTGGTCTGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CAA 90 bp GCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGCGGTTTCCCAGAACAGCCGGGCCGTCTTaGCATCCTCCACGGCTCCAT +
Preference number: 5 (lower is better)
Translates to: ASPSHCAPELRDFLRFPRTAGPS*HPPRLH
Trigger: ATGGAGCCGTGGAGGATGCAAAGACGGCCCGGCTGT...TCTGGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp GCCCACAGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCTTCCCTGGGAAGGTTaGCCTGCCTTCCCACGGAAT +
Preference number: 5 (lower is better)
Translates to: AHSLGKAFSRPWHFSHHPLPWEG*PAFPRN
Trigger: ATTCCGTGGGAAGGCAGGCAAACCTTCCCAGGGAAG...AGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp CCACTTGCATCCACCTCTGTCCACTGGACTCCCCTCCAAGCTGGCCTCGCTACCTCTTCCAGCCCAGGCTaGTCCAGGAAGCCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: PLASTSVHWTPLQAGLATSSSPG*SRKPLG
Trigger: ACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGAAGA...GGTAGCGAGGCCAGCTTGGAGGGGAGTCCAGTGGACAGAGGTGGATGCAAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp GCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGCGGTTTCCCAGAACCTGGACACTGGGGTaGGCCTTAGCTGCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: ASPSHCAPELRDFLRFPRTWTLG*ALAAPG
Trigger: TCCTGGGGCAGCTAAGGCCAACCCCAGTGTCCAGGT...TCTGGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp GCCCACAGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTGCAGAACTGGTGATGTaGAACAGCCGGGCCGTCTTT +
Preference number: 5 (lower is better)
Translates to: AHSLGKAFSRPWHFSHHPAELVM*NSRAVF
Trigger: AAAGACGGCCCGGCTGTTCAACATCACCAGTTCTGC...AGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp GGGCAGGGACACAGACGCTGGAAGCCAGGGTGCAGCAGCGAGGGGAGAAGCCCCCAACCTGGGACAATTTaGCATAAGCCCTTCCTGCTA +
Preference number: 5 (lower is better)
Translates to: GQGHRRWKPGCSSEGRSPQPGTI*HKPFLL
Trigger: TAGCAGGAAGGGCTTATGCAAAATTGTCCCAGGTTG...GGGGCTTCTCCCCTCGCTGCTGCACCCTGGCTTCCAGCGTCTGTGTCCCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp CACCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGCTCAGCTCCCTCCACTaGCATCCACCTCTGTCCACT +
Preference number: 5 (lower is better)
Translates to: HHPPRGSMTAPCSPASASLSSLH*HPPLST
Trigger: AGTGGACAGAGGTGGATGCAAGTGGAGGGAGCTGAG...CGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp AGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGACCCTGTCCCCTGCGTTaGTCCCATCTGCTGCTAGCT +
Preference number: 5 (lower is better)
Translates to: SLGKAFSRPWHFSHHPPRPCPLR*SHLLLA
Trigger: AGCTAGCAGCAGATGGGACAAACGCAGGGGACAGGG...TCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp GCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGCGGTTTCCCAGACCCTGTCCCCTGCGTTaGTCCCATCTGCTGCTAGCT +
Preference number: 5 (lower is better)
Translates to: ASPSHCAPELRDFLRFPRPCPLR*SHLLLA
Trigger: AGCTAGCAGCAGATGGGACAAACGCAGGGGACAGGG...TCTGGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp CACCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGCCAAGCCCTCCCATTTaGAGGTCACACACTCCCCTC +
Preference number: 5 (lower is better)
Translates to: HHPPRGSMTAPCSPASASPSPPI*RSHTPL
Trigger: GAGGGGAGTGTGTGACCTCAAAATGGGAGGGCTTGG...CGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp TTCCTGCCCTTGGTACACAGCCCTCTCCACTGGGCTGTCCAAGTCAAGGGACAGACCTGGACACTGGGGTaGGCCTTAGCTGCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: FLPLVHSPLHWAVQVKGQTWTLG*ALAAPG
Trigger: TCCTGGGGCAGCTAAGGCCAACCCCAGTGTCCAGGT...CTGTCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp ACAAGAAGCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATCGCACGCTGTCGGTCTaGCTGCTCTTGGACTCCATG +
Preference number: 5 (lower is better)
Translates to: TRSPALPQPHGILRFRDHRTLSV*LLLDSM
Trigger: CATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGCG...ATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CAA 90 bp AGGGAGGATTGCAAAGCCTCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTACAGCCGGGCCGTCTTaGCATCCTCCACGGCTCCAT +
Preference number: 5 (lower is better)
Translates to: REDCKASRLLQALPGTQSTAGPS*HPPRLH
Trigger: ATGGAGCCGTGGAGGATGCAAAGACGGCCCGGCTGT...ACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGAGGCTTTGCAATCCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp AGTCTCGGCAAGGCTTTCAGCCGCCCCTGGCACTTCTCCCACCATCCTCCAAGAAACATGTCTCAGTGCTaGTCTCCGCCAGCAGCCGTG +
Preference number: 5 (lower is better)
Translates to: SLGKAFSRPWHFSHHPPRNMSQC*SPPAAV
Trigger: CACGGCTGCTGGCGGAGACAAGCACTGAGACATGTT...TCTTGGAGGATGGTGGGAGAAGTGCCAGGGGCGGCTGAAAGCCTTGCCGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp TCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCCAGCTTCTGATGGCCTaGCTGCCCAGTTCACAGCTC +
Preference number: 5 (lower is better)
Translates to: SRLLQALPGTQSRRLGWSQLLMA*LPSSQL
Trigger: GAGCTGTGAACTGGGCAGCAAGGCCATCAGAAGCTG...GCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp TCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCCGCTGGCCTCGGCCTTaGAAAGGCATCTTCCGTTCA +
Preference number: 5 (lower is better)
Translates to: SRLLQALPGTQSRRLGWSRWPRP*KGIFRS
Trigger: TGAACGGAAGATGCCTTTCAAAGGCCGAGGCCAGCG...GCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp CCCATGACTGTGCCTGAGTTCCAAGGGGACAGAGCCCATCCCTGCATCCTGCCTCGCTGGCCTCGGCCTTaGAAAGGCATCTTCCGTTCA +
Preference number: 5 (lower is better)
Translates to: PMTVPEFQGDRAHPCILPRWPRP*KGIFRS
Trigger: TGAACGGAAGATGCCTTTCAAAGGCCGAGGCCAGCG...AGGCAGGATGCAGGGATGGGCTCTGTCCCCTTGGAACTCAGGCACAGTCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp GGTCAGGACTGTGACCAGAATCTTGCTCGCTGCACTCCTGCCACGGCTGTGCCCATCCTGCCTCCCACATaGTGGACTGCACATGCCATG +
Preference number: 5 (lower is better)
Translates to: GQDCDQNLARCTPATAVPILPPT*WTAHAM
Trigger: CATGGCATGTGCAGTCCACAATGTGGGAGGCAGGAT...GGGCACAGCCGTGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGTCCTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp GTGCAGTGGACAGGGAGCGCCAGCAGGTCAGGCATGAGTACAGACAGGCAAAGATGCACCCTCATCAGCTaGTCTTCAGGGCTGACCGGC +
Preference number: 5 (lower is better)
Translates to: VQWTGSASRSGMSTDRQRCTLIS*SSGLTG
Trigger: GCCGGTCAGCCCTGAAGACAAGCTGATGAGGGTGCA...TCTTTGCCTGTCTGTACTCATGCCTGACCTGCTGGCGCTCCCTGTCCACTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp ACAAGAAGCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATTGCACCCTCATCAGCTaGTCTTCAGGGCTGACCGGC +
Preference number: 5 (lower is better)
Translates to: TRSPALPQPHGILRFRDHCTLIS*SSGLTG
Trigger: GCCGGTCAGCCCTGAAGACAAGCTGATGAGGGTGCA...ATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp AGCTTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCCTTCCCTGGGAAGGTTaGCCTGCCTTCCCACGGAAT +
Preference number: 5 (lower is better)
Translates to: SFPKHEAHGHAPSLGRFALPWEG*PAFPRN
Trigger: ATTCCGTGGGAAGGCAGGCAAACCTTCCCAGGGAAG...GGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp CTTCTGAGGCACCCCACGTCTCCAGCCCAGAAGGCTCTTCCCTTCTCTGCTTGGCTCAGCTCCCTCCACTaGCATCCACCTCTGTCCACT +
Preference number: 5 (lower is better)
Translates to: LLRHPTSPAQKALPFSAWLSSLH*HPPLST
Trigger: AGTGGACAGAGGTGGATGCAAGTGGAGGGAGCTGAG...CCAAGCAGAGAAGGGAAGAGCCTTCTGGGCTGGAGACGTGGGGTGCCTCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp ACAAGAAGCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATCCTGGTTTCCTGCCCTaGGTACACAGCCCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: TRSPALPQPHGILRFRDHPGFLP*VHSPLH
Trigger: GTGGAGAGGGCTGTGTACCAAGGGCAGGAAACCAGG...ATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp CCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCCCCTGTCCCCTGCGTTaGTCCCATCTGCTGCTAGCT +
Preference number: 5 (lower is better)
Translates to: PPRHNMEDTWTLGLALAAPCPLR*SHLLLA
Trigger: AGCTAGCAGCAGATGGGACAAACGCAGGGGACAGGG...GGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp ACGGCTGTGCCCTGTCCCCTGCGTTTGTCCCATCTGCTGCTAGCTCAAGGTCCTCCAAGCCCTCCCATTTaGAGGTCACACACTCCCCTC +
Preference number: 5 (lower is better)
Translates to: TAVPCPLRLSHLLLAQGPPSPPI*RSHTPL
Trigger: GAGGGGAGTGTGTGACCTCAAAATGGGAGGGCTTGG...AGGACCTTGAGCTAGCAGCAGATGGGACAAACGCAGGGGACAGGGCACAGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp CTCCTTCGTGTGCCTCGCCGATGCCCTGCACTTTTCCTAGTGCACCCTCATCAGTCTTCCAGCCCAGGCTaGTCCAGGAAGCCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: LLRVPRRCPALFLVHPHQSSSPG*SRKPLG
Trigger: ACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGAAGA...CTGATGAGGGTGCACTAGGAAAAGTGCAGGGCATCGGCGAGGCACACGAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS TCA 90 bp GAAGCTTCTTGTCTCGCACCTCGGTGGTGTCCGGGTAGACCTCGATaGCGGTCGTGGGGTTGGTCATCGTCTTCTTCTCGGCTAGGTGCT +
Preference number: 5 (lower is better)
Translates to: EASCLAPRWCPGRPR*RSWGWSSSSSRLGA
Trigger: AGCACCTAGCCGAGAAGAAGACGATGACCAACCCCACGACCGTCATCGAGGTCTACCCGGACACCACCGAGGTGCGAGACAAGAAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482459.1
CDS-3UTR CAA 90 bp CCTCCCATCCCACCACTGCCTGGGTTCAAGGGTCAGTGCTCAAGAGTCCCACATCAGCTTCTGATGGCCTaGCTGCCCAGTTCACAGCTC +
Preference number: 5 (lower is better)
Translates to: PPIPPLPGFKGQCSRVPHQLLMA*LPSSQL
Trigger: GAGCTGTGAACTGGGCAGCAAGGCCATCAGAAGCTG...ATGTGGGACTCTTGAGCACTGACCCTTGAACCCAGGCAGTGGTGGGATGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp TTCCTGCCCTTGGTACACAGCCCTCTCCACTGGGCTGTCCAAGTCAAGGGACAGCAGCTTCTGATGGCCTaGCTGCCCAGTTCACAGCTC +
Preference number: 5 (lower is better)
Translates to: FLPLVHSPLHWAVQVKGQQLLMA*LPSSQL
Trigger: GAGCTGTGAACTGGGCAGCAAGGCCATCAGAAGCTG...CTGTCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp CACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGCCTGCTTGCCTGCCTGTTCCTGAGGGAGGATaGCAAAGCCTCCAGACTTCT +
Preference number: 5 (lower is better)
Translates to: HRLRSQRPAPELMPACLPVPEGG*QSLQTS
Trigger: AGAAGTCTGGAGGCTTTGCAATCCTCCCTCAGGAAC...AGGCAGGCAAGCAGGCATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp TCCCACGGAATAGCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGCGCTGGCCTCGGCCTTaGAAAGGCATCTTCCGTTCA +
Preference number: 5 (lower is better)
Translates to: SHGIASPSHCAPELRDFLRWPRP*KGIFRS
Trigger: TGAACGGAAGATGCCTTTCAAAGGCCGAGGCCAGCG...CAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGCTATTCCGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp ACAAGAAGCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATCTTCCCTGGGAAGGTTaGCCTGCCTTCCCACGGAAT +
Preference number: 5 (lower is better)
Translates to: TRSPALPQPHGILRFRDHLPWEG*PAFPRN
Trigger: ATTCCGTGGGAAGGCAGGCAAACCTTCCCAGGGAAG...ATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp CTTCTGAGGCACCCCACGTCTCCAGCCCAGAAGGCTCTTCCCTTCTCTGCTTGGACTGTGACCAGAATCTaGCTCGCTGCACTCCTGCCA +
Preference number: 5 (lower is better)
Translates to: LLRHPTSPAQKALPFSAWTVTRI*LAALLP
Trigger: TGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGT...CCAAGCAGAGAAGGGAAGAGCCTTCTGGGCTGGAGACGTGGGGTGCCTCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp TTCCCAAAACATGAGGCGCACGGCCATGCCCCTTCCCTGGGAAGGTTTGCCTGCACTGTGACCAGAATCTaGCTCGCTGCACTCCTGCCA +
Preference number: 5 (lower is better)
Translates to: FPKHEAHGHAPSLGRFACTVTRI*LAALLP
Trigger: TGGCAGGAGTGCAGCGAGCAAGATTCTGGTCACAGT...GCAGGCAAACCTTCCCAGGGAAGGGGCATGGCCGTGCGCCTCATGTTTTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp CCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCCCAAGCCCTCCCATTTaGAGGTCACACACTCCCCTC +
Preference number: 5 (lower is better)
Translates to: PPRHNMEDTWTLGLALAAPSPPI*RSHTPL
Trigger: GAGGGGAGTGTGTGACCTCAAAATGGGAGGGCTTGG...GGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp CTGCATCCTGCCTCCCACATTGTGGACTGCACATGCCATGGGCCGTCAGGGCGCCCACATTGCCCGGAGTaGGATACAAACATCCCAAGA +
Preference number: 5 (lower is better)
Translates to: LHPASHIVDCTCHGPSGRPHCPE*DTNIPR
Trigger: TCTTGGGATGTTTGTATCCAACTCCGGGCAATGTGG...GCGCCCTGACGGCCCATGGCATGTGCAGTCCACAATGTGGGAGGCAGGATGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp ACAAGAAGCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATTCGGTCTTGCTGCTCTaGGACTCCATGGGGAACAGT +
Preference number: 5 (lower is better)
Translates to: TRSPALPQPHGILRFRDHSVLLL*DSMGNS
Trigger: ACTGTTCCCCATGGAGTCCAAGAGCAGCAAGACCGA...ATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGCTTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CAA 90 bp CTGCATCCTGCCTCCCACATTGTGGACTGCACATGCCATGGGCCGTCAGGGCGCTCATTGAGAAGCTTCTaGTCTCGCACTTTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LHPASHIVDCTCHGPSGRSLRSF*SRTLRE
Trigger: CTCCCTCAAAGTGCGAGACAAGAAGCTTCTCAATGA...GCGCCCTGACGGCCCATGGCATGTGCAGTCCACAATGTGGGAGGCAGGATGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CAA 90 bp CCACTTGCATCCACCTCTGTCCACTGGACTCCCCTCCAAGCTGGCCTCGCTACCGCTCCATTCAGGTCATaGAGAAGCTTCTTGTCTCGC +
Preference number: 5 (lower is better)
Translates to: PLASTSVHWTPLQAGLATAPFRS*RSFLSR
Trigger: GCGAGACAAGAAGCTTCTCAATGACCTGAATGGAGC...GGTAGCGAGGCCAGCTTGGAGGGGAGTCCAGTGGACAGAGGTGGATGCAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp GAAGACACCTGGACACTGGGGTTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGGCAGAACTGGTGATGTaGAACAGCCGGGCCGTCTTT +
Preference number: 5 (lower is better)
Translates to: EDTWTLGLALAAPGTRSQAELVM*NSRAVF
Trigger: AAAGACGGCCCGGCTGTTCAACATCACCAGTTCTGC...CTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAACCCCAGTGTCCAGGTGTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp CCACTTGCATCCACCTCTGTCCACTGGACTCCCCTCCAAGCTGGCCTCGCTACCCTAAGTGACTCGAGTTaGGGGTACCTCCACCAAATG +
Preference number: 5 (lower is better)
Translates to: PLASTSVHWTPLQAGLATLSDSS*GYLHQM
Trigger: CATTTGGTGGAGGTACCCCAAACTCGAGTCACTTAG...GGTAGCGAGGCCAGCTTGGAGGGGAGTCCAGTGGACAGAGGTGGATGCAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp TTCCTGCCCTTGGTACACAGCCCTCTCCACTGGGCTGTCCAAGTCAAGGGACAGATCCTGCCTCCCACATaGTGGACTGCACATGCCATG +
Preference number: 5 (lower is better)
Translates to: FLPLVHSPLHWAVQVKGQILPPT*WTAHAM
Trigger: CATGGCATGTGCAGTCCACAATGTGGGAGGCAGGAT...CTGTCCCTTGACTTGGACAGCCCAGTGGAGAGGGCTGTGTACCAAGGGCAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp CTACTTTCTTCCCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGCGCACGCTGTCGGTCTaGCTGCTCTTGGACTCCATG +
Preference number: 5 (lower is better)
Translates to: LLSSLPGITWKTPGHWGWRTLSV*LLLDSM
Trigger: CATGGAGTCCAAGAGCAGCAAGACCGACAGCGTGCG...CCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGGGAAGAAAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CAA 90 bp ACAGACAGGCAAAGACACAGACTTCGAAGCCAGAGACCAGCGCCGGAGCTGATGATGACGGTCGTGGGGTaGGTCATCGTCTTCTTCTCG +
Preference number: 5 (lower is better)
Translates to: TDRQRHRLRSQRPAPELMMTVVG*VIVFFS
Trigger: CGAGAAGAAGACGATGACCAACCCCACGACCGTCAT...CATCAGCTCCGGCGCTGGTCTCTGGCTTCGAAGTCTGTGTCTTTGCCTGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CAA 90 bp CACCATCCTCCAAGAGGCTCAATGACAGCTCCGTGCAGCCCCGCATCAGCCTCGTCATTGAGAAGCTTCTaGTCTCGCACTTTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: HHPPRGSMTAPCSPASASSLRSF*SRTLRE
Trigger: CTCCCTCAAAGTGCGAGACAAGAAGCTTCTCAATGA...CGAGGCTGATGCGGGGCTGCACGGAGCTGTCATTGAGCCTCTTGGAGGATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340134.5
ENST00000382123.1
CDS-3UTR CAA 90 bp ATTGCCCGGAGTTGGATACAAACATCCCAAGAGCTAGGGGTGCCTTTACTGGCTACAGCCGGGCCGTCTTaGCATCCTCCACGGCTCCAT +
Preference number: 5 (lower is better)
Translates to: IARSWIQTSQELGVPLLATAGPS*HPPRLH
Trigger: ATGGAGCCGTGGAGGATGCAAAGACGGCCCGGCTGT...AGCCAGTAAAGGCACCCCTAGCTCTTGGGATGTTTGTATCCAACTCCGGGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp ACGGCTGTGCCCTGTCCCCTGCGTTTGTCCCATCTGCTGCTAGCTCAAGGTCCTCTAAGTGACTCGAGTTaGGGGTACCTCCACCAAATG +
Preference number: 5 (lower is better)
Translates to: TAVPCPLRLSHLLLAQGPLSDSS*GYLHQM
Trigger: CATTTGGTGGAGGTACCCCAAACTCGAGTCACTTAG...AGGACCTTGAGCTAGCAGCAGATGGGACAAACGCAGGGGACAGGGCACAGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp GCAAGTCCTTCCCACTGCGCACCTGAGCTGCGGGATTTCCTGCGGTTTCCCAGACTTTGTAGCCCCACATaGCCCGGAGTTGGATACAAA +
Preference number: 5 (lower is better)
Translates to: ASPSHCAPELRDFLRFPRLCSPT*PGVGYK
Trigger: TTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAG...TCTGGGAAACCGCAGGAAATCCCGCAGCTCAGGTGCGCAGTGGGAAGGACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp TCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTAGAAGGCTGGGCTGGAGCCTTTGTAGCCCCACATaGCCCGGAGTTGGATACAAA +
Preference number: 5 (lower is better)
Translates to: SRLLQALPGTQSRRLGWSLCSPT*PGVGYK
Trigger: TTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAG...GCTCCAGCCCAGCCTTCTACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp AGGGAGGATTGCAAAGCCTCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTAAGCTCACTGCCCCCTaGCTGTACTCAGCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: REDCKASRLLQALPGTQSKLTAP*LYSASD
Trigger: ATCAGAAGCTGAGTACAGCAAGGGGGCAGTGAGCTT...ACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGAGGCTTTGCAATCCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp CTTCTGAGGCACCCCACGTCTCCAGCCCAGAAGGCTCTTCCCTTCTCTGCTTGGCAACCTGGGACAATTTaGCATAAGCCCTTCCTGCTA +
Preference number: 5 (lower is better)
Translates to: LLRHPTSPAQKALPFSAWQPGTI*HKPFLL
Trigger: TAGCAGGAAGGGCTTATGCAAAATTGTCCCAGGTTG...CCAAGCAGAGAAGGGAAGAGCCTTCTGGGCTGGAGACGTGGGGTGCCTCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp TTGGCCTTAGCTGCCCCAGGAACTAGAAGCCAGGACCCTCTCTCTTCCAAGGCCCCACATTGCCCGGAGTaGGATACAAACATCCCAAGA +
Preference number: 5 (lower is better)
Translates to: LALAAPGTRSQDPLSSKAPHCPE*DTNIPR
Trigger: TCTTGGGATGTTTGTATCCAACTCCGGGCAATGTGG...GGCCTTGGAAGAGAGAGGGTCCTGGCTTCTAGTTCCTGGGGCAGCTAAGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp GCCCTGCCCTGCCCCAACCTCATGGGATCCTGCGTTTCAGGGACCATGAGAATACCACATTGCCCGGAGTaGGATACAAACATCCCAAGA +
Preference number: 5 (lower is better)
Translates to: ALPCPNLMGSCVSGTMRIPHCPE*DTNIPR
Trigger: TCTTGGGATGTTTGTATCCAACTCCGGGCAATGTGG...TATTCTCATGGTCCCTGAAACGCAGGATCCCATGAGGTTGGGGCAGGGCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp GCTTCTCCCCCACCTTACCTTCCAAACCAGTCAACCCCACTGACTGCACAGCTGGCTCCATTCAGGTCATaGAGAAGCTTCTTGTCTCGC +
Preference number: 5 (lower is better)
Translates to: ASPPPYLPNQSTPLTAQLAPFRS*RSFLSR
Trigger: GCGAGACAAGAAGCTTCTCAATGACCTGAATGGAGC...CAGCTGTGCAGTCAGTGGGGTTGACTGGTTTGGAAGGTAAGGTGGGGGAGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp AGGGAGGATTGCAAAGCCTCCAGACTTCTCCAGGCCCTGCCAGGGACACAAAGTGCTCCATTCAGGTCATaGAGAAGCTTCTTGTCTCGC +
Preference number: 5 (lower is better)
Translates to: REDCKASRLLQALPGTQSAPFRS*RSFLSR
Trigger: GCGAGACAAGAAGCTTCTCAATGACCTGAATGGAGC...ACTTTGTGTCCCTGGCAGGGCCTGGAGAAGTCTGGAGGCTTTGCAATCCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp CTACTTTCTTCCCTCCCAGGCATAACATGGAAGACACCTGGACACTGGGGTTGGGCAGAACTGGTGATGTaGAACAGCCGGGCCGTCTTT +
Preference number: 5 (lower is better)
Translates to: LLSSLPGITWKTPGHWGWAELVM*NSRAVF
Trigger: AAAGACGGCCCGGCTGTTCAACATCACCAGTTCTGC...CCAACCCCAGTGTCCAGGTGTCTTCCATGTTATGCCTGGGAGGGAAGAAAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp ATTGCCCGGAGTTGGATACAAACATCCCAAGAGCTAGGGGTGCCTTTACTGGCTAACATGTCTCAGTGCTaGTCTCCGCCAGCAGCCGTG +
Preference number: 5 (lower is better)
Translates to: IARSWIQTSQELGVPLLANMSQC*SPPAAV
Trigger: CACGGCTGCTGGCGGAGACAAGCACTGAGACATGTT...AGCCAGTAAAGGCACCCCTAGCTCTTGGGATGTTTGTATCCAACTCCGGGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp ATCCTGCGTTTCAGGGACCATGAGAATAAACATGTCTCAGTGCTTGTCTCCGCCTGCACCCTCATCAGCTaGTCTTCAGGGCTGACCGGC +
Preference number: 5 (lower is better)
Translates to: ILRFRDHENKHVSVLVSACTLIS*SSGLTG
Trigger: GCCGGTCAGCCCTGAAGACAAGCTGATGAGGGTGCA...GGCGGAGACAAGCACTGAGACATGTTTATTCTCATGGTCCCTGAAACGCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp GAAGCCAGGGGCCTTTGTAGCCCCACATTGCCCGGAGTTGGATACAAACATCCCCTTTGTAGCCCCACATaGCCCGGAGTTGGATACAAA +
Preference number: 5 (lower is better)
Translates to: EARGLCSPTLPGVGYKHPLCSPT*PGVGYK
Trigger: TTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAG...GGGATGTTTGTATCCAACTCCGGGCAATGTGGGGCTACAAAGGCCCCTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp AGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGAGAGAGGTAAAGGGGTCTTCCAGCCCAGGCTaGTCCAGGAAGCCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: RPFSYFTAKEMGTREVKGSSSPG*SRKPLG
Trigger: ACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGAAGA...CCCCTTTACCTCTCTCGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp ATCCTCTTCCAGCCCAGGCTTGTCCAGGAAGCCTCTGGGTCTAATGGTGCAAGCAGGCAAAGAAAGCATTaGCCCCTCTACTTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: ILFQPRLVQEASGSNGASRQRKH*PLYFLP
Trigger: GGGAAGAAAGTAGAGGGGCAAATGCTTTCTTTGCCT...GCTTGCACCATTAGACCCAGAGGCTTCCTGGACAAGCCTGGGCTGGAAGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp AGTGAGTCCTCCCAACCTGGGACAATTTTGCATAAGCCCTTCCTGCTAGGTGTCGTTCCTGAGGGAGGATaGCAAAGCCTCCAGACTTCT +
Preference number: 5 (lower is better)
Translates to: SESSQPGTILHKPFLLGVVPEGG*QSLQTS
Trigger: AGAAGTCTGGAGGCTTTGCAATCCTCCCTCAGGAAC...GACACCTAGCAGGAAGGGCTTATGCAAAATTGTCCCAGGTTGGGAGGACTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp ATTGCCCGGAGTTGGATACAAACATCCCAAGAGCTAGGGGTGCCTTTACTGGCTGTTCCTGAGGGAGGATaGCAAAGCCTCCAGACTTCT +
Preference number: 5 (lower is better)
Translates to: IARSWIQTSQELGVPLLAVPEGG*QSLQTS
Trigger: AGAAGTCTGGAGGCTTTGCAATCCTCCCTCAGGAAC...AGCCAGTAAAGGCACCCCTAGCTCTTGGGATGTTTGTATCCAACTCCGGGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp GATTATAGAAGTGAAAGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGCCTGGTTTCCTGCCCTaGGTACACAGCCCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: DYRSERPFSYFTAKEMGTPGFLP*VHSPLH
Trigger: GTGGAGAGGGCTGTGTACCAAGGGCAGGAAACCAGG...CGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCTTTCACTTCTATAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp ATCCTGCGTTTCAGGGACCATGAGAATAAACATGTCTCAGTGCTTGTCTCCGCCAGGCAAAGAAAGCATTaGCCCCTCTACTTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: ILRFRDHENKHVSVLVSARQRKH*PLYFLP
Trigger: GGGAAGAAAGTAGAGGGGCAAATGCTTTCTTTGCCT...GGCGGAGACAAGCACTGAGACATGTTTATTCTCATGGTCCCTGAAACGCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp AGGCCATTTTCCTATTTTACAGCTAAGGAGATGGGCACGAGAGAGGTAAAGGGGCAACCTGGGACAATTTaGCATAAGCCCTTCCTGCTA +
Preference number: 5 (lower is better)
Translates to: RPFSYFTAKEMGTREVKGQPGTI*HKPFLL
Trigger: TAGCAGGAAGGGCTTATGCAAAATTGTCCCAGGTTG...CCCCTTTACCTCTCTCGTGCCCATCTCCTTAGCTGTAAAATAGGAAAATGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp AATGTCAAATGTCTGCCAGGCACTGTGCAAAATCACATAAAAATGAGGTGGGAGAAGCTCACTGCCCCCTaGCTGTACTCAGCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: NVKCLPGTVQNHIKMRWEKLTAP*LYSASD
Trigger: ATCAGAAGCTGAGTACAGCAAGGGGGCAGTGAGCTT...CTCCCACCTCATTTTTATGTGATTTTGCACAGTGCCTGGCAGACATTTGACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS-3UTR CAA 90 bp AATGTCAAATGTCTGCCAGGCACTGTGCAAAATCACATAAAAATGAGGTGGGAGAGGCAAAGAAAGCATTaGCCCCTCTACTTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: NVKCLPGTVQNHIKMRWERQRKH*PLYFLP
Trigger: GGGAAGAAAGTAGAGGGGCAAATGCTTTCTTTGCCT...CTCCCACCTCATTTTTATGTGATTTTGCACAGTGCCTGGCAGACATTTGACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000630256.1
CDS TCA 72 bp TGGGCAAGCGACTCCTCGGCGCGCGGCCGGACCCCCTaGGCCTCGGTGCGCGCGTCCTTCCGCCGTCCCGCG +
Preference number: 6 (lower is better)
Translates to: WASDSSARGRTP*ASVRASFRRPA
Trigger: CGCGGGACGGCGGAAGGACGCGCGCACCGAGGCTCAGGGGGTCCGGCCGCGCGCCGAGGAGTCGCTTGCCCA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486852.1
CDS CCA 72 bp GGGGGACTCGGGCTTCCTGGGCGCCGTCCGTGGTGCTaGCCGGGTCTCCCAGCGGGGCTGGGCACTGGCCGG +
Preference number: 6 (lower is better)
Translates to: GGLGLPGRRPWC*PGLPAGLGTGR
Trigger: CCGGCCAGTGCCCAGCCCCGCTGGGAGACCCGGCCAGCACCACGGACGGCGCCCAGGAAGCCCGAGTCCCCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000482459.1
ENST00000486852.1
CDS TCA 72 bp CCTACAAGCGACTCCTCGGCGCGCGGCCGGACCCCCTaGGCCTCGGTGCGCGCGTCCTTCCGCCGTCCCGCG +
Preference number: 6 (lower is better)
Translates to: PTSDSSARGRTP*ASVRASFRRPA
Trigger: CGCGGGACGGCGGAAGGACGCGCGCACCGAGGCTCAGGGGGTCCGGCCGCGCGCCGAGGAGTCGCTTGTAGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382123.1
ENST00000482459.1
CDS GCA 72 bp CCCCGCACACACGGGGCGCCGGACCCACAGCGACGCTaGCTCAGCCGCCAACCGGCAGAGCTAGCAGAGCGG +
Preference number: 6 (lower is better)
Translates to: PRTHGAPDPQRR*LSRQPAELAER
Trigger: CCGCTCTGCTAGCTCTGCCGGTTGGCGGCTGAGGCAGCGTCGCTGTGGGTCCGGCGCCCCGTGTGTGCGGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482459.1
CDS TCA 72 bp GTCCTTCCGCCGTCCCGCGGGCCGCTGTCTGTCCACTaGTCCGCCTCCCAGCGGCCCAACCTTGAGGGGGTG +
Preference number: 6 (lower is better)
Translates to: VLPPSRGPLSVH*SASQRPNLEGV
Trigger: CACCCCCTCAAGGTTGGGCCGCTGGGAGGCGGATCAGTGGACAGACAGCGGCCCGCGGGACGGCGGAAGGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486852.1
CDS CCA 72 bp CACCCTCACGCCCAGCAGCTCCGAGAACAGCCCCAGTaGAGACGGAAATCCCTGCGGGGGCCGCCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: HPHAQQLREQPQ*RRKSLRGPPAA
Trigger: GGCAGCTGGCGGCCCCCGCAGGGATTTCCGTCTCCACTGGGGCTGTTCTCGGAGCTGCTGGGCGTGAGGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482459.1
CDS CCA 72 bp GGCCCTGGGCCTGGAGAGGAGAAAGTGAGAGCAAGCTaGGCCCGGCCTACCGGCCAGCACCCACCCTCACGC +
Preference number: 6 (lower is better)
Translates to: GPGPGEEKVRAS*ARPTGQHPPSR
Trigger: GCGTGAGGGTGGGTGCTGGCCGGTAGGCCGGGCCCAGCTTGCTCTCACTTTCTCCTCTCCAGGCCCAGGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482459.1
CDS GCA 72 bp ACACTTCTCCAACGAGGCACCAAGTCGCTCGCGCTCTaGGCCACCCCGCGTTCCCAGCTCCCGTGCGGCGCT +
Preference number: 6 (lower is better)
Translates to: TLLQRGTKSLAL*ATPRSQLPCGA
Trigger: AGCGCCGCACGGGAGCTGGGAACGCGGGGTGGCGCAGAGCGCGAGCGACTTGGTGCCTCGTTGGAGAAGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482459.1
CDS GCA 72 bp CTTGGACACGCAAGCGAAGCAGCCCTTGGGCGAACCTaGCGGGGGCCTCGGAATCCAGAAGGCCCCGTCCAG +
Preference number: 6 (lower is better)
Translates to: LGHASEAALGRT*RGPRNPEGPVQ
Trigger: CTGGACGGGGCCTTCTGGATTCCGAGGCCCCCGGCAGGTTCGCCCAAGGGCTGCTTCGCTTGCGTGTCCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000482459.1
ENST00000486852.1
CDS CAA 72 bp AGGGCAGGGGGCTTGGACACGCAAGCGAAGCAGCCCTaGGGCGAACCTGCCGGGGGCCTCGGAATCCAGAAG +
Preference number: 6 (lower is better)
Translates to: RAGGLDTQAKQP*GEPAGGLGIQK
Trigger: CTTCTGGATTCCGAGGCCCCCGGCAGGTTCGCCCAAGGGCTGCTTCGCTTGCGTGTCCAAGCCCCCTGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340134.5
ENST00000382123.1
ENST00000482459.1
ENST00000486852.1
CDS TCA 72 bp TGTCTCGCACCTCGGTGGTGTCCGGGTAGACCTCGATaGCGGTCGTGGGGTTGGTCATCGTCTTCTTCTCGG +
Preference number: 6 (lower is better)
Translates to: CLAPRWCPGRPR*RSWGWSSSSSR
Trigger: CCGAGAAGAAGACGATGACCAACCCCACGACCGTCATCGAGGTCTACCCGGACACCACCGAGGTGCGAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482459.1
CDS TCA 72 bp CCGTCTTTGCATCCTCCACGGCTCCATTCAGGTCATTaGGAAGCTTCTTGTCTCGCACCTCGGTGGTGTCCG +
Preference number: 6 (lower is better)
Translates to: PSLHPPRLHSGH*EASCLAPRWCP
Trigger: CGGACACCACCGAGGTGCGAGACAAGAAGCTTCTCAATGACCTGAATGGAGCCGTGGAGGATGCAAAGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482459.1
CDS CAA 72 bp GCCGTCTTTGCATCCTCCACGGCTCCATTCAGGTCATaGAGAAGCTTCTTGTCTCGCACCTCGGTGGTGTCC +
Preference number: 6 (lower is better)
Translates to: AVFASSTAPFRS*RSFLSRTSVVS
Trigger: GGACACCACCGAGGTGCGAGACAAGAAGCTTCTCAATGACCTGAATGGAGCCGTGGAGGATGCAAAGACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482459.1