RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IFIT5 (Homo sapiens)

Ensembl gene IDs: ENSG00000152778

Ensembl transcript IDs: ENST00000371795.5, ENST00000679632.1, ENST00000680591.1, ENST00000681163.1, ENST00000681348.1, ENST00000681359.1, ENST00000681422.1

Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTAGAACAGCCACAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTaGAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATT +
Preference number: 1 (lower is better)
Translates to: LEQPQHPHLGGACLK*RNLRPLLCMNTALI
Trigger: AATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTGTGGCTGTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR CCA 90 bp GGAAAGTCGGAGCTCACAGAGAGCAGTCAGGAATTCTGCATTTTCTaGATCTATCTTTTGTGCCTTCTCATAGTACTCAGCAGCTTGCCT +
Preference number: 1 (lower is better)
Translates to: GKSELTESSQEFCIF*IYLLCLLIVLSSLP
Trigger: AGGCAAGCTGCTGAGTACTATGAGAAGGCACAAAAGATAGATCCAGAAAATGCAGAATTCCTGACTGCTCTCTGTGAGCTCCGACTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR TCA 90 bp TCTTCAGAGCACTTGTCAGTTTGGTGCGAAGGGGTGATCTGTCTTTaGCCTTTAAGGCTTCTAAATAATGATGGATGGCAGTATTTTCTG +
Preference number: 1 (lower is better)
Translates to: SSEHLSVWCEGVICL*PLRLLNNDGWQYFL
Trigger: CAGAAAATACTGCCATCCATCATTATTTAGAAGCCTTAAAGGTCAAAGACAGATCACCCCTTCGCACCAAACTGACAAGTGCTCTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR GCA 90 bp TATTTAAATGGAAAGTCGGAGCTCACAGAGAGCAGTCAGGAATTCTaGATTTTCTGGATCTATCTTTTGTGCCTTCTCATAGTACTCAGC +
Preference number: 1 (lower is better)
Translates to: YLNGKSELTESSQEF*IFWIYLLCLLIVLS
Trigger: GCTGAGTACTATGAGAAGGCACAAAAGATAGATCCAGAAAATGCAGAATTCCTGACTGCTCTCTGTGAGCTCCGACTTTCCATTTAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR CCA 90 bp AGAGTATTATATACCAAGTATATGATGAGGAGTCCAAATGCAAACTaGATATTCAAGGAACTTAGGATTTCCTGGGTTAAGCCTATTAGC +
Preference number: 1 (lower is better)
Translates to: RVLYTKYMMRSPNAN*IFKELRISWVKPIS
Trigger: GCTAATAGGCTTAACCCAGGAAATCCTAAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATATAATACTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR CAA 90 bp GTTATGTTCTCCAGACGAAGAGCTTTCCGGAAAATGTCCTCAGCATaGCTATACTGGCCTCCTTCAGCGTACATGTTGGCCAGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: VMFSRRRAFRKMSSA*LYWPPSAYMLARSV
Trigger: CACAGACCTGGCCAACATGTACGCTGAAGGAGGCCAGTATAGCAATGCTGAGGACATTTTCCGGAAAGCTCTTCGTCTGGAGAACATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR-3UTR GCA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTGCTCCCAAACTTTGCTaGACAAGTTCCAACTGGGAA +
Preference number: 2 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLAPKLC*TSSNWE
Trigger: TTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGC...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR CCA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTTCAGCATTGCTATACTaGCCTCCTTCAGCGTACATG +
Preference number: 2 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLSALLY*PPSAYM
Trigger: CATGTACGCTGAAGGAGGCCAGTATAGCAATGCTGA...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR-3UTR GCA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTCTGGACTGCACCCCATaGCAATTAAGTCATTCTCTA +
Preference number: 2 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLLDCTP*QLSHSL
Trigger: TAGAGAATGACTTAATTGGCATGGGGTGCAGTCCAG...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR CCA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTAAAAATCATGATGCCTaGACTGCACCCCATGCCAAT +
Preference number: 2 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLKNHDA*TAPHAN
Trigger: ATTGGCATGGGGTGCAGTCCAGGCATCATGATTTTT...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR CCA 90 bp GGTAATGGATCTGATGTTTGTGATCATCGGTTATGTTCTCCAGACGAAGAGCTTCTTCAGCGTACATGTTaGCCAGGTCTGTGTAGGCAA +
Preference number: 2 (lower is better)
Translates to: GNGSDVCDHRLCSPDEELLQRTC*PGLCRQ
Trigger: TTGCCTACACAGACCTGGCCAACATGTACGCTGAAG...AAGCTCTTCGTCTGGAGAACATAACCGATGATCACAAACATCAGATCCATTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR CAA 90 bp CAAAATGTAATTAGAACAGCCACAGCATCCTCACCTAGGAGGAGCTaGTTTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACAC +
Preference number: 2 (lower is better)
Translates to: QNVIRTATASSPRRS*FKVQKSQAPSVYEH
Trigger: GTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTGTGGCTGTTCTAATTACATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR CAA 90 bp CTCACAGAGAGCAGTCAGGAATTCTGCATTTTCTGGATCTATCTTTaGTGCCTTCTCATAGTACTCAGCAGCTTGCCTCTTTTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: LTESSQEFCIFWIYL*CLLIVLSSLPLFSF
Trigger: GAAGGAGAAAAGAGGCAAGCTGCTGAGTACTATGAGAAGGCACAAAAGATAGATCCAGAAAATGCAGAATTCCTGACTGCTCTCTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR-3UTR GCA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTAGCAGTCAGGAATTCTaGATTTTCTGGATCTATCTT +
Preference number: 2 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLSSQEF*IFWIYL
Trigger: AAGATAGATCCAGAAAATGCAGAATTCCTGACTGCT...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR-3UTR CCA 90 bp AGCTCCCAAACTTTGCTGCACAAGTTCCAACTGGGAAATCTAAAAATCATGATGGAGCACTTGTCAGTTTaGTGCGAAGGGGTGATCTGT +
Preference number: 2 (lower is better)
Translates to: SSQTLLHKFQLGNLKIMMEHLSV*CEGVIC
Trigger: ACAGATCACCCCTTCGCACCAAACTGACAAGTGCTC...CATCATGATTTTTAGATTTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR-3UTR TCA 90 bp AATGGAAAGTCGGAGCTCACAGAGAGCAGTCAGGAATTCTGCATTTTCTGGATCACATCTAAAGCATTGTaGCAAAGTCTCTTGGTAGAC +
Preference number: 2 (lower is better)
Translates to: NGKSELTESSQEFCIFWITSKAL*QSLLVD
Trigger: GTCTACCAAGAGACTTTGTCACAATGCTTTAGATGT...GATCCAGAAAATGCAGAATTCCTGACTGCTCTCTGTGAGCTCCGACTTTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR-3UTR CCA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTGTAATTTTGTACTCCTaGAAGAGTATTCCTGATCTA +
Preference number: 2 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLVILYS*KSIPDL
Trigger: TAGATCAGGAATACTCTTCCAGGAGTACAAAATTAC...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR CCA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTGTTACATTGGAGGAATaGAGAATTAAATCACATGGT +
Preference number: 2 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLVTLEE*RIKSHG
Trigger: ACCATGTGATTTAATTCTCCATTCCTCCAATGTAAC...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR TCA 90 bp AGTCGGAGCTCACAGAGAGCAGTCAGGAATTCTGCATTTTCTGGATCTATCTTTCTGGAAGAGTATTCCTaGTCTAGGTATCAAAGGTTT +
Preference number: 2 (lower is better)
Translates to: SRSSQRAVRNSAFSGSIFLEEYS*SRYQRF
Trigger: AAACCTTTGATACCTAGATCAGGAATACTCTTCCAG...AAAGATAGATCCAGAAAATGCAGAATTCCTGACTGCTCTCTGTGAGCTCCGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR-3UTR TCA 90 bp AGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACTCAAAACTAGTACACTaGAACCTTGGTAATCTATGG +
Preference number: 2 (lower is better)
Translates to: RRSLFKVQKSQAPSVYEHSKLVH*NLGNLW
Trigger: CCATAGATTACCAAGGTTTCAGTGTACTAGTTTTGA...GTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR GCA 90 bp AGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAAGTTTGAGGAACAATaGTGTAGACCTTACTACTCA +
Preference number: 2 (lower is better)
Translates to: RRSLFKVQKSQAPSVYEHKFEEQ*CRPYYS
Trigger: TGAGTAGTAAGGTCTACAGCATTGTTCCTCAAACTT...GTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR GCA 90 bp AGCTCCCAAACTTTGCTGCACAAGTTCCAACTGGGAAATCTAAAAATCATGATGAAATGTCCTCAGCATTaGTATACTGGCCTCCTTCAG +
Preference number: 2 (lower is better)
Translates to: SSQTLLHKFQLGNLKIMMKCPQH*YTGLLQ
Trigger: CTGAAGGAGGCCAGTATAGCAATGCTGAGGACATTT...CATCATGATTTTTAGATTTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR-3UTR CCA 90 bp AGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACCTCCCAATTTCCCAATaGCTGCTTTATATCTCAATA +
Preference number: 2 (lower is better)
Translates to: RRSLFKVQKSQAPSVYEHLPISQ*LLYISI
Trigger: TATTGAGATATAAAGCAGCCATTGGGAAATTGGGAG...GTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR CCA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATTTATGTACTTTCAGGTaGGAGAAATGGCCTGCTTTG +
Preference number: 2 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYLCTFR*EKWPAL
Trigger: CAAAGCAGGCCATTTCTCCCACCTGAAAGTACATAA...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR CCA 90 bp AGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACGAGTATGTATTTAAATaGAAAGTCGGAGCTCACAGA +
Preference number: 2 (lower is better)
Translates to: RRSLFKVQKSQAPSVYEHEYVFK*KVGAHR
Trigger: TCTGTGAGCTCCGACTTTCCATTTAAATACATACTC...GTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR-3UTR TCA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTGGAACTGTGGTAGGGTaGGAGGACTGCTCTCATTTT +
Preference number: 2 (lower is better)
Translates to: YTKYMMRSPNANWIFKELGTVVG*EDCSHF
Trigger: AAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCC...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR TCA 90 bp AGCTCCCAAACTTTGCTGCACAAGTTCCAACTGGGAAATCTAAAAATCATGATGTCAGGACTTCAGTGCTaGCTTTCTGAAATTCTTGAG +
Preference number: 2 (lower is better)
Translates to: SSQTLLHKFQLGNLKIMMSGLQC*LSEILE
Trigger: CTCAAGAATTTCAGAAAGTCAGCACTGAAGTCCTGA...CATCATGATTTTTAGATTTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR GCA 90 bp GGTAATGGATCTGATGTTTGTGATCATCGGTTATGTTCTCCAGACGAAGAGCTTGTCTCGTTCCATGGCTaGTTTGAAATGAAATATAGC +
Preference number: 2 (lower is better)
Translates to: GNGSDVCDHRLCSPDEELVSFHG*FEMKYS
Trigger: GCTATATTTCATTTCAAAGCAGCCATGGAACGAGAC...AAGCTCTTCGTCTGGAGAACATAACCGATGATCACAAACATCAGATCCATTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR-3UTR CCA 90 bp AGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACGTAATTTTGTACTCCTaGAAGAGTATTCCTGATCTA +
Preference number: 2 (lower is better)
Translates to: RRSLFKVQKSQAPSVYEHVILYS*KSIPDL
Trigger: TAGATCAGGAATACTCTTCCAGGAGTACAAAATTAC...GTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR TCA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATTCAAAACTAGTACACTaGAACCTTGGTAATCTATGG +
Preference number: 2 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYSKLVH*NLGNLW
Trigger: CCATAGATTACCAAGGTTTCAGTGTACTAGTTTTGA...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR TCA 90 bp AGCTCCCAAACTTTGCTGCACAAGTTCCAACTGGGAAATCTAAAAATCATGATGCCAAAGGCCAGAAATTaGGGGTATAAAAACTCCATT +
Preference number: 2 (lower is better)
Translates to: SSQTLLHKFQLGNLKIMMPKARN*GYKNSI
Trigger: AATGGAGTTTTTATACCCTCAATTTCTGGCCTTTGG...CATCATGATTTTTAGATTTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR TCA 90 bp AGCTCCCAAACTTTGCTGCACAAGTTCCAACTGGGAAATCTAAAAATCATGATGGATGGCAGTATTTTCTaGTTTACGGTGAAATTCCTG +
Preference number: 2 (lower is better)
Translates to: SSQTLLHKFQLGNLKIMMDGSIF*FTVKFL
Trigger: CAGGAATTTCACCGTAAATCAGAAAATACTGCCATC...CATCATGATTTTTAGATTTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR-3UTR GCA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTGTAGCTCCCAAACTTTaGTGCACAAGTTCCAACTGG +
Preference number: 2 (lower is better)
Translates to: YTKYMMRSPNANWIFKELVAPKL*CTSSNW
Trigger: CCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCTAC...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR CCA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACTTCAGGTGGGAGAAATaGCCTGCTTTGCTAGAATAT +
Preference number: 2 (lower is better)
Translates to: WPALLEYPKISERDKCVYFRWEK*PALLEY
Trigger: ATATTCTAGCAAAGCAGGCCATTTCTCCCACCTGAA...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR CAA 90 bp CCATTTATACTTACTTTTCACATGTCCATCAGTAGCTCCCAAACTTaGCTGCACAAGTTCCAACTGGGAAATCTAAAAATCATGATGCCT +
Preference number: 2 (lower is better)
Translates to: PFILTFHMSISSSQT*LHKFQLGNLKIMMP
Trigger: AGGCATCATGATTTTTAGATTTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCTACTGATGGACATGTGAAAAGTAAGTATAAATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR TCA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACCTGGAAGAGTATTCCTaGTCTAGGTATCAAAGGTTT +
Preference number: 2 (lower is better)
Translates to: WPALLEYPKISERDKCVYLEEYS*SRYQRF
Trigger: AAACCTTTGATACCTAGATCAGGAATACTCTTCCAG...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR TCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTCCAAAGGCCAGAAATTaGGGGTATAAAAACTCCATT +
Preference number: 2 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFPKARN*GYKNSI
Trigger: AATGGAGTTTTTATACCCTCAATTTCTGGCCTTTGG...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR GCA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATATACGTGAGATACACTaGAGTATATATGTATGTCTG +
Preference number: 2 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYIREIH*SIYVCL
Trigger: CAGACATACATATATACTGCAGTGTATCTCACGTAT...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR GCA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTCTGGACTGCACCCCATaGCAATTAAGTCATTCTCTA +
Preference number: 2 (lower is better)
Translates to: YTKYMMRSPNANWIFKELLDCTP*QLSHSL
Trigger: TAGAGAATGACTTAATTGGCATGGGGTGCAGTCCAG...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR CAA 90 bp TGTCTACTGATAGGTCAGGACTTCAGTGCTGACTTTCTGAAATTCTaGAGTAAAGATCATTCCCTTCCTTGTTCTTCCTTAATAGATCAA +
Preference number: 2 (lower is better)
Translates to: CLLIGQDFSADFLKF*SKDHSLPCSSLIDQ
Trigger: TTGATCTATTAAGGAAGAACAAGGAAGGGAATGATCTTTACTCAAGAATTTCAGAAAGTCAGCACTGAAGTCCTGACCTATCAGTAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR GCA 90 bp AGCTCCCAAACTTTGCTGCACAAGTTCCAACTGGGAAATCTAAAAATCATGATGTCTGTAACTAAAAAGTaGTGTCTTTTGCAAGCTACA +
Preference number: 2 (lower is better)
Translates to: SSQTLLHKFQLGNLKIMMSVTKK*CLLQAT
Trigger: TGTAGCTTGCAAAAGACAGCACTTTTTAGTTACAGA...CATCATGATTTTTAGATTTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR GCA 90 bp AGCTCCCAAACTTTGCTGCACAAGTTCCAACTGGGAAATCTAAAAATCATGATGATACGTGAGATACACTaGAGTATATATGTATGTCTG +
Preference number: 2 (lower is better)
Translates to: SSQTLLHKFQLGNLKIMMIREIH*SIYVCL
Trigger: CAGACATACATATATACTGCAGTGTATCTCACGTAT...CATCATGATTTTTAGATTTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR GCA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACAAGTTTGAGGAACAATaGTGTAGACCTTACTACTCA +
Preference number: 2 (lower is better)
Translates to: WPALLEYPKISERDKCVYKFEEQ*CRPYYS
Trigger: TGAGTAGTAAGGTCTACAGCATTGTTCCTCAAACTT...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR CCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTCTCCCAATTTCCCAATaGCTGCTTTATATCTCAATA +
Preference number: 2 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFLPISQ*LLYISI
Trigger: TATTGAGATATAAAGCAGCCATTGGGAAATTGGGAG...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR CCA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTAGCGACCCCTCAAGGTaGATATTAAAACTGAAAGCA +
Preference number: 2 (lower is better)
Translates to: YTKYMMRSPNANWIFKELSDPSR*ILKLKA
Trigger: TGCTTTCAGTTTTAATATCCACCTTGAGGGGTCGCT...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR CCA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTTTCAGGTGGGAGAAATaGCCTGCTTTGCTAGAATAT +
Preference number: 2 (lower is better)
Translates to: YTKYMMRSPNANWIFKELFRWEK*PALLEY
Trigger: ATATTCTAGCAAAGCAGGCCATTTCTCCCACCTGAA...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR CCA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTTTATGTACTTTCAGGTaGGAGAAATGGCCTGCTTTG +
Preference number: 2 (lower is better)
Translates to: YTKYMMRSPNANWIFKELLCTFR*EKWPAL
Trigger: CAAAGCAGGCCATTTCTCCCACCTGAAAGTACATAA...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR TCA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTCTGGAAGAGTATTCCTaGTCTAGGTATCAAAGGTTT +
Preference number: 2 (lower is better)
Translates to: YTKYMMRSPNANWIFKELLEEYS*SRYQRF
Trigger: AAACCTTTGATACCTAGATCAGGAATACTCTTCCAG...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR GCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTTCTGTAACTAAAAAGTaGTGTCTTTTGCAAGCTACA +
Preference number: 2 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFSVTKK*CLLQAT
Trigger: TGTAGCTTGCAAAAGACAGCACTTTTTAGTTACAGA...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR GCA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTTCTGTAACTAAAAAGTaGTGTCTTTTGCAAGCTACA +
Preference number: 2 (lower is better)
Translates to: YTKYMMRSPNANWIFKELSVTKK*CLLQAT
Trigger: TGTAGCTTGCAAAAGACAGCACTTTTTAGTTACAGA...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR CCA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTGTTACATTGGAGGAATaGAGAATTAAATCACATGGT +
Preference number: 2 (lower is better)
Translates to: YTKYMMRSPNANWIFKELVTLEE*RIKSHG
Trigger: ACCATGTGATTTAATTCTCCATTCCTCCAATGTAAC...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR GCA 72 bp CCAGACGAAGAGCTTTCCGGAAAATGTCCTCAGCATTaGTATACTGGCCTCCTTCAGCGTACATGTTGGCCA +
Preference number: 3 (lower is better)
Translates to: PDEELSGKCPQH*YTGLLQRTCWP
Trigger: TGGCCAACATGTACGCTGAAGGAGGCCAGTATAGCAATGCTGAGGACATTTTCCGGAAAGCTCTTCGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR GCA 72 bp CCACAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTaGAGAAATCTCAGGCCCCTTCTGTGTATGAACACA +
Preference number: 3 (lower is better)
Translates to: PQHPHLGGACLK*RNLRPLLCMNT
Trigger: TGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR CAA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTAGAGCACTTGTCAGTTaGGTGCGAAGGGGTGATCTG +
Preference number: 3 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFRALVS*VRRGDL
Trigger: CAGATCACCCCTTCGCACCAAACTGACAAGTGCTCT...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR TCA 72 bp CACTTGTCAGTTTGGTGCGAAGGGGTGATCTGTCTTTaGCCTTTAAGGCTTCTAAATAATGATGGATGGCAG +
Preference number: 3 (lower is better)
Translates to: HLSVWCEGVICL*PLRLLNNDGWQ
Trigger: CTGCCATCCATCATTATTTAGAAGCCTTAAAGGTCAAAGACAGATCACCCCTTCGCACCAAACTGACAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR-3UTR CAA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACATAGTACTCAGCAGCTaGCCTCTTTTCTCCTTCCAG +
Preference number: 3 (lower is better)
Translates to: WPALLEYPKISERDKCVYIVLSS*PLFSFQ
Trigger: CTGGAAGGAGAAAAGAGGCAAGCTGCTGAGTACTAT...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR TCA 72 bp CCTAGGGCACTTAAACTCTGCACATCTAAAGCATTGTaGCAAAGTCTCTTGGTAGACAATTTCTTCAGAGCA +
Preference number: 3 (lower is better)
Translates to: PRALKLCTSKAL*QSLLVDNFFRA
Trigger: TGCTCTGAAGAAATTGTCTACCAAGAGACTTTGTCACAATGCTTTAGATGTGCAGAGTTTAAGTGCCCTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR-3UTR CAA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATCTACTTAATAAACATTaGGGGATTGAATCCCTGAAG +
Preference number: 3 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYLLNKH*GIESLK
Trigger: CTTCAGGGATTCAATCCCCAAATGTTTATTAAGTAG...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR CAA 90 bp AGCTCCCAAACTTTGCTGCACAAGTTCCAACTGGGAAATCTAAAAATCATGATGCTACTTAATAAACATTaGGGGATTGAATCCCTGAAG +
Preference number: 3 (lower is better)
Translates to: SSQTLLHKFQLGNLKIMMLLNKH*GIESLK
Trigger: CTTCAGGGATTCAATCCCCAAATGTTTATTAAGTAG...CATCATGATTTTTAGATTTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR TCA 72 bp GCAAACATAGAGTCTCGTTCCATGGCTGCTTTGAAATaGAATATAGCAGATGAAATCAGCTCATCAACCTTT +
Preference number: 3 (lower is better)
Translates to: ANIESRSMAALK*NIADEISSSTF
Trigger: AAAGGTTGATGAGCTGATTTCATCTGCTATATTTCATTTCAAAGCAGCCATGGAACGAGACTCTATGTTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR-3UTR CAA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTAGTTATAAGTTTACCTaGAGGGTGTGGAACTGTGGT +
Preference number: 3 (lower is better)
Translates to: YTKYMMRSPNANWIFKELSYKFT*RVWNCG
Trigger: ACCACAGTTCCACACCCTCAAGGTAAACTTATAACT...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR CCA 72 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTaGATATTCAAGGAACTTAGGATTTCCTGGGTTAAG +
Preference number: 3 (lower is better)
Translates to: YTKYMMRSPNAN*IFKELRISWVK
Trigger: CTTAACCCAGGAAATCCTAAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR-3UTR CAA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTAGATCATTCCCTTCCTaGTTCTTCCTTAATAGATCA +
Preference number: 3 (lower is better)
Translates to: YTKYMMRSPNANWIFKELRSFPS*FFLNRS
Trigger: TGATCTATTAAGGAAGAACAAGGAAGGGAATGATCT...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTATGATGGCAGCGCTCTaGAGGCCGTCCGGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLMMAAL*RPSGRR
Trigger: GCGCCGCCCGGACGGCCTGCAGAGCGCTGCCATCAT...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR GCA 90 bp GGTTGGAGTAGGGATTTTCTCAAGGTCCTCCTGATTTTAAAGTTCTGTGTTGTCATGATGGCAGCGCTCTaGAGGCCGTCCGGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GWSRDFLKVLLILKFCVVMMAAL*RPSGRR
Trigger: GCGCCGCCCGGACGGCCTGCAGAGCGCTGCCATCAT...GACAACACAGAACTTTAAAATCAGGAGGACCTTGAGAAAATCCCTACTCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681163.1
CDS-3UTR GCA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGATGATGGCAGCGCTCTaGAGGCCGTCCGGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRMMAAL*RPSGRR
Trigger: GCGCCGCCCGGACGGCCTGCAGAGCGCTGCCATCAT...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
3UTR CAA 72 bp TCCAGACGAAGAGCTTTCCGGAAAATGTCCTCAGCATaGCTATACTGGCCTCCTTCAGCGTACATGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SRRRAFRKMSSA*LYWPPSAYMLA
Trigger: GGCCAACATGTACGCTGAAGGAGGCCAGTATAGCAATGCTGAGGACATTTTCCGGAAAGCTCTTCGTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR TCA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTGACGTAAGGCTGGGATaGTATTTGGTCCAGGATTTC +
Preference number: 4 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLDVRLG*YLVQDF
Trigger: GAAATCCTGGACCAAATATCATCCCAGCCTTACGTC...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR GCA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTCACTTGTCAGTTTGGTaGGAAGGGGTGATCTGTCTT +
Preference number: 4 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLHLSVW*EGVICL
Trigger: AAGACAGATCACCCCTTCGCACCAAACTGACAAGTG...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR TCA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTTTACCTGTATACTTCTaGGCTTCTTCAAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLLPVYF*ASSSWS
Trigger: GGACCAGCTTGAAGAAGCTCAGAAGTATACAGGTAA...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR TCA 90 bp AGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACGGAACTGTGGTAGGGTaGGAGGACTGCTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: RRSLFKVQKSQAPSVYEHGTVVG*EDCSHF
Trigger: AAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCC...GTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR TCA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATCAGGAAACTGGAGATTaGATCAGATGCCGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYQETGD*IRCRAL
Trigger: GAGCGCTCGGCATCTGATTCAATCTCCAGTTTCCTG...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR TCA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTGGGGTGATCTGTCTTTaGCCTTTAAGGCTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLGVICL*PLRLLN
Trigger: ATTTAGAAGCCTTAAAGGTCAAAGACAGATCACCCC...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR TCA 90 bp AATGGAAAGTCGGAGCTCACAGAGAGCAGTCAGGAATTCTGCATTTTCTGGATCCCATCTGTATACTTCTaGGCTTCTTCAAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: NGKSELTESSQEFCIFWIPSVYF*ASSSWS
Trigger: GGACCAGCTTGAAGAAGCTCAGAAGTATACAGATGG...GATCCAGAAAATGCAGAATTCCTGACTGCTCTCTGTGAGCTCCGACTTTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR GCA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTTTCCCCTTCAGCTTCTaGATGTACATCTTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLFPFSF*MYILKL
Trigger: AAGCTTCAAGATGTACATGCAGAAGCTGAAGGGGAA...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR GCA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTGTCTGTGTAGGCAAATaGAAACATAGAGTCTCGTTC +
Preference number: 4 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLVCVGK*KHRVSF
Trigger: GAACGAGACTCTATGTTTGCATTTGCCTACACAGAC...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp AATGGAAAGTCGGAGCTCACAGAGAGCAGTCAGGAATTCTGCATTTTCTGGATCGCTCCCAAACTTTGCTaGACAAGTTCCAACTGGGAA +
Preference number: 4 (lower is better)
Translates to: NGKSELTESSQEFCIFWIAPKLC*TSSNWE
Trigger: TTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGC...GATCCAGAAAATGCAGAATTCCTGACTGCTCTCTGTGAGCTCCGACTTTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR CCA 90 bp TATGTTCTCCAGACGAAGAGCTTTCCGGAAAATGTCCTCAGCATTGCTATACTGCTTCAGCGTACATGTTaGCCAGGTCTGTGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: YVLQTKSFPENVLSIAILLQRTC*PGLCRQ
Trigger: TTGCCTACACAGACCTGGCCAACATGTACGCTGAAG...CAGTATAGCAATGCTGAGGACATTTTCCGGAAAGCTCTTCGTCTGGAGAACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR CCA 90 bp GGAGCTCACAGAGAGCAGTCAGGAATTCTGCATTTTCTGGATCTATCTTTTGTGGAGCACTTGTCAGTTTaGTGCGAAGGGGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: GAHREQSGILHFLDLSFVEHLSV*CEGVIC
Trigger: ACAGATCACCCCTTCGCACCAAACTGACAAGTGCTC...CACAAAAGATAGATCCAGAAAATGCAGAATTCCTGACTGCTCTCTGTGAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR CCA 90 bp GTACATGTTGGCCAGGTCTGTGTAGGCAAATGCAAACATAGAGTCTCGTTCCATTTTACCTTGAGGGTGTaGAACTGTGGTAGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: VHVGQVCVGKCKHRVSFHFTLRV*NCGRVR
Trigger: TCTCACCCTACCACAGTTCCACACCCTCAAGGTAAA...ATGGAACGAGACTCTATGTTTGCATTTGCCTACACAGACCTGGCCAACATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR TCA 90 bp CTCAAGGTCCTCCTGATTTTAAAGTTCTGTGTTGTCTACAAGGTTGTTCCTGAATACGAATTTCACTCATaGTGGCAGCGCTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LKVLLILKFCVVYKVVPEYEFHS*WQRSAG
Trigger: GCCTGCAGAGCGCTGCCATCATGAGTGAAATTCGTA...TTCAGGAACAACCTTGTAGACAACACAGAACTTTAAAATCAGGAGGACCTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681163.1
CDS-3UTR TCA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTACATCTAAAGCATTGTaGCAAAGTCTCTTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLTSKAL*QSLLVD
Trigger: GTCTACCAAGAGACTTTGTCACAATGCTTTAGATGT...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR TCA 90 bp GGTAATGGATCTGATGTTTGTGATCATCGGTTATGTTCTCCAGACGAAGAGCTTGGAACTGTGGTAGGGTaGGAGGACTGCTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: GNGSDVCDHRLCSPDEELGTVVG*EDCSHF
Trigger: AAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCC...AAGCTCTTCGTCTGGAGAACATAACCGATGATCACAAACATCAGATCCATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR GCA 90 bp GTACATGTTGGCCAGGTCTGTGTAGGCAAATGCAAACATAGAGTCTCGTTCCATGGAGCTTGTTTAAAGTaGAGAAATCTCAGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: VHVGQVCVGKCKHRVSFHGACLK*RNLRPL
Trigger: AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCC...ATGGAACGAGACTCTATGTTTGCATTTGCCTACACAGACCTGGCCAACATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR CCA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATCTTCAGCGTACATGTTaGCCAGGTCTGTGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYLQRTC*PGLCRQ
Trigger: TTGCCTACACAGACCTGGCCAACATGTACGCTGAAG...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp AGTCGGAGCTCACAGAGAGCAGTCAGGAATTCTGCATTTTCTGGATCTATCTTTTCAGCATTGCTATACTaGCCTCCTTCAGCGTACATG +
Preference number: 4 (lower is better)
Translates to: SRSSQRAVRNSAFSGSIFSALLY*PPSAYM
Trigger: CATGTACGCTGAAGGAGGCCAGTATAGCAATGCTGA...AAAGATAGATCCAGAAAATGCAGAATTCCTGACTGCTCTCTGTGAGCTCCGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR CCA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATGAGCACTTGTCAGTTTaGTGCGAAGGGGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYEHLSV*CEGVIC
Trigger: ACAGATCACCCCTTCGCACCAAACTGACAAGTGCTC...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp GTACATGTTGGCCAGGTCTGTGTAGGCAAATGCAAACATAGAGTCTCGTTCCATAAAAATCATGATGCCTaGACTGCACCCCATGCCAAT +
Preference number: 4 (lower is better)
Translates to: VHVGQVCVGKCKHRVSFHKNHDA*TAPHAN
Trigger: ATTGGCATGGGGTGCAGTCCAGGCATCATGATTTTT...ATGGAACGAGACTCTATGTTTGCATTTGCCTACACAGACCTGGCCAACATGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR TCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTCAGGAAACTGGAGATTaGATCAGATGCCGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFQETGD*IRCRAL
Trigger: GAGCGCTCGGCATCTGATTCAATCTCCAGTTTCCTG...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR TCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTTACGAATTTCACTCATaGTGGCAGCGCTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFYEFHS*WQRSAG
Trigger: GCCTGCAGAGCGCTGCCATCATGAGTGAAATTCGTA...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371795.5
CDS-3UTR TCA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATCATAGTTTCCCCAAGTaGCCAGGCTTCGTACTTCTT +
Preference number: 4 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYHSFPK*PGFVLL
Trigger: AAGAAGTACGAAGCCTGGTCACTTGGGGAAACTATG...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR TCA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATAAGATAAAATACTCATaGTGGCAGCGCTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYKIKYS*WQRSAG
Trigger: GCCTGCAGAGCGCTGCCATCATGAGTATTTTATCTT...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681422.1
CDS-3UTR GCA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTAAGTTTGAGGAACAATaGTGTAGACCTTACTACTCA +
Preference number: 4 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLKFEEQ*CRPYYS
Trigger: TGAGTAGTAAGGTCTACAGCATTGTTCCTCAAACTT...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp GGTAATGGATCTGATGTTTGTGATCATCGGTTATGTTCTCCAGACGAAGAGCTTGTAGCTCCCAAACTTTaGTGCACAAGTTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: GNGSDVCDHRLCSPDEELVAPKL*CTSSNW
Trigger: CCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCTAC...AAGCTCTTCGTCTGGAGAACATAACCGATGATCACAAACATCAGATCCATTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR CCA 90 bp AGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACTTCTCCTATAGAACTTaGCTGCATAACGAAGGACGT +
Preference number: 4 (lower is better)
Translates to: RRSLFKVQKSQAPSVYEHFSYRT*LHNEGR
Trigger: ACGTCCTTCGTTATGCAGCCAAGTTCTATAGGAGAA...GTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CCA 90 bp AATGGAAAGTCGGAGCTCACAGAGAGCAGTCAGGAATTCTGCATTTTCTGGATCAGCGACCCCTCAAGGTaGATATTAAAACTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: NGKSELTESSQEFCIFWISDPSR*ILKLKA
Trigger: TGCTTTCAGTTTTAATATCCACCTTGAGGGGTCGCT...GATCCAGAAAATGCAGAATTCCTGACTGCTCTCTGTGAGCTCCGACTTTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR CCA 90 bp AGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACTTATGTACTTTCAGGTaGGAGAAATGGCCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: RRSLFKVQKSQAPSVYEHLCTFR*EKWPAL
Trigger: CAAAGCAGGCCATTTCTCCCACCTGAAAGTACATAA...GTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR CAA 72 bp CTCTTGGTAGACAATTTCTTCAGAGCACTTGTCAGTTaGGTGCGAAGGGGTGATCTGTCTTTGACCTTTAAG +
Preference number: 4 (lower is better)
Translates to: LLVDNFFRALVS*VRRGDLSLTFK
Trigger: CTTAAAGGTCAAAGACAGATCACCCCTTCGCACCAAACTGACAAGTGCTCTGAAGAAATTGTCTACCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR TCA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATTTACCTGTATACTTCTaGGCTTCTTCAAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYLPVYF*ASSSWS
Trigger: GGACCAGCTTGAAGAAGCTCAGAAGTATACAGGTAA...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR TCA 90 bp AATGGAAAGTCGGAGCTCACAGAGAGCAGTCAGGAATTCTGCATTTTCTGGATCCTGGAAGAGTATTCCTaGTCTAGGTATCAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: NGKSELTESSQEFCIFWILEEYS*SRYQRF
Trigger: AAACCTTTGATACCTAGATCAGGAATACTCTTCCAG...GATCCAGAAAATGCAGAATTCCTGACTGCTCTCTGTGAGCTCCGACTTTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR TCA 90 bp AGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACCCAAAGGCCAGAAATTaGGGGTATAAAAACTCCATT +
Preference number: 4 (lower is better)
Translates to: RRSLFKVQKSQAPSVYEHPKARN*GYKNSI
Trigger: AATGGAGTTTTTATACCCTCAATTTCTGGCCTTTGG...GTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR TCA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACGGAACTGTGGTAGGGTaGGAGGACTGCTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: WPALLEYPKISERDKCVYGTVVG*EDCSHF
Trigger: AAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCC...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATGGAGCTTGTTTAAAGTaGAGAAATCTCAGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYGACLK*RNLRPL
Trigger: AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCC...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATCTGGACTGCACCCCATaGCAATTAAGTCATTCTCTA +
Preference number: 4 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYLDCTP*QLSHSL
Trigger: TAGAGAATGACTTAATTGGCATGGGGTGCAGTCCAG...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATGCAAGAACAGGAAACTaGAGATTGAATCAGATGCCG +
Preference number: 4 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYARTGN*RLNQMP
Trigger: CGGCATCTGATTCAATCTCCAGTTTCCTGTTCTTGC...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CCA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATGCCGATGTTAAATTCTaGATTGTCAGGCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYADVKF*IVRLHF
Trigger: GAAGTGGAGCCTGACAATCCAGAATTTAACATCGGC...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTGAGCACTTGTCAGTTTaGTGCGAAGGGGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFEHLSV*CEGVIC
Trigger: ACAGATCACCCCTTCGCACCAAACTGACAAGTGCTC...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp GGAGCTCACAGAGAGCAGTCAGGAATTCTGCATTTTCTGGATCTATCTTTTGTGTTATGTACTTTCAGGTaGGAGAAATGGCCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: GAHREQSGILHFLDLSFVLCTFR*EKWPAL
Trigger: CAAAGCAGGCCATTTCTCCCACCTGAAAGTACATAA...CACAAAAGATAGATCCAGAAAATGCAGAATTCCTGACTGCTCTCTGTGAGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR CCA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATAAAAATCATGATGCCTaGACTGCACCCCATGCCAAT +
Preference number: 4 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYKNHDA*TAPHAN
Trigger: ATTGGCATGGGGTGCAGTCCAGGCATCATGATTTTT...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR CAA 72 bp ATCTATCTTTTGTGCCTTCTCATAGTACTCAGCAGCTaGCCTCTTTTCTCCTTCCAGCTTGTAAACAAACCC +
Preference number: 4 (lower is better)
Translates to: IYLLCLLIVLSS*PLFSFQLVNKP
Trigger: GGGTTTGTTTACAAGCTGGAAGGAGAAAAGAGGCAAGCTGCTGAGTACTATGAGAAGGCACAAAAGATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679632.1
3UTR CAA 72 bp AGCAGTCAGGAATTCTGCATTTTCTGGATCTATCTTTaGTGCCTTCTCATAGTACTCAGCAGCTTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SSQEFCIFWIYL*CLLIVLSSLPL
Trigger: AAGAGGCAAGCTGCTGAGTACTATGAGAAGGCACAAAAGATAGATCCAGAAAATGCAGAATTCCTGACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR TCA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGGACGTAAGGCTGGGATaGTATTTGGTCCAGGATTTC +
Preference number: 4 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRDVRLG*YLVQDF
Trigger: GAAATCCTGGACCAAATATCATCCCAGCCTTACGTC...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR TCA 90 bp GGTAATGGATCTGATGTTTGTGATCATCGGTTATGTTCTCCAGACGAAGAGCTTGGGGTGATCTGTCTTTaGCCTTTAAGGCTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: GNGSDVCDHRLCSPDEELGVICL*PLRLLN
Trigger: ATTTAGAAGCCTTAAAGGTCAAAGACAGATCACCCC...AAGCTCTTCGTCTGGAGAACATAACCGATGATCACAAACATCAGATCCATTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR TCA 90 bp AATGGAAAGTCGGAGCTCACAGAGAGCAGTCAGGAATTCTGCATTTTCTGGATCTCAAAACTAGTACACTaGAACCTTGGTAATCTATGG +
Preference number: 4 (lower is better)
Translates to: NGKSELTESSQEFCIFWISKLVH*NLGNLW
Trigger: CCATAGATTACCAAGGTTTCAGTGTACTAGTTTTGA...GATCCAGAAAATGCAGAATTCCTGACTGCTCTCTGTGAGCTCCGACTTTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR TCA 90 bp AAGGTCCTCCTGATTTTAAAGTTCTGTGTTGTCTACAAGGTTGTTCCTGAACTGCTACAAGGTTGTTCCTaGACTGAAGTAATCGGCATC +
Preference number: 4 (lower is better)
Translates to: KVLLILKFCVVYKVVPELLQGCS*TEVIGI
Trigger: GATGCCGATTACTTCAGTTCAGGAACAACCTTGTAG...CAGTTCAGGAACAACCTTGTAGACAACACAGAACTTTAAAATCAGGAGGACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681163.1
CDS-3UTR GCA 90 bp AGCTCCCAAACTTTGCTGCACAAGTTCCAACTGGGAAATCTAAAAATCATGATGCCTATAGAACTTGGCTaGATAACGAAGGACGTAAGG +
Preference number: 4 (lower is better)
Translates to: SSQTLLHKFQLGNLKIMMPIELG*ITKDVR
Trigger: CCTTACGTCCTTCGTTATGCAGCCAAGTTCTATAGG...CATCATGATTTTTAGATTTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR GCA 90 bp TATGTTCTCCAGACGAAGAGCTTTCCGGAAAATGTCCTCAGCATTGCTATACTGGTCTCGTTCCATGGCTaGTTTGAAATGAAATATAGC +
Preference number: 4 (lower is better)
Translates to: YVLQTKSFPENVLSIAILVSFHG*FEMKYS
Trigger: GCTATATTTCATTTCAAAGCAGCCATGGAACGAGAC...CAGTATAGCAATGCTGAGGACATTTTCCGGAAAGCTCTTCGTCTGGAGAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR GCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTCACTTGTCAGTTTGGTaGGAAGGGGTGATCTGTCTT +
Preference number: 4 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFHLSVW*EGVICL
Trigger: AAGACAGATCACCCCTTCGCACCAAACTGACAAGTG...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp AGCTCCCAAACTTTGCTGCACAAGTTCCAACTGGGAAATCTAAAAATCATGATGCTGGACTGCACCCCATaGCAATTAAGTCATTCTCTA +
Preference number: 4 (lower is better)
Translates to: SSQTLLHKFQLGNLKIMMLDCTP*QLSHSL
Trigger: TAGAGAATGACTTAATTGGCATGGGGTGCAGTCCAG...CATCATGATTTTTAGATTTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGGCTCCCAAACTTTGCTaGACAAGTTCCAACTGGGAA +
Preference number: 4 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRAPKLC*TSSNWE
Trigger: TTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGC...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTGTAGCTCCCAAACTTTaGTGCACAAGTTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFVAPKL*CTSSNW
Trigger: CCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCTAC...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACCAGGAAAGAAGAAGTTaGTGTCACCTCCAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: WPALLEYPKISERDKCVYQERRS*CHLQGL
Trigger: AAGGCCTTGGAGGTGACACCAACTTCTTCTTTCCTG...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CCA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGCAGGAAAGAAGAAGTTaGTGTCACCTCCAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRQERRS*CHLQGL
Trigger: AAGGCCTTGGAGGTGACACCAACTTCTTCTTTCCTG...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CCA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACTCAGCATTGCTATACTaGCCTCCTTCAGCGTACATG +
Preference number: 4 (lower is better)
Translates to: WPALLEYPKISERDKCVYSALLY*PPSAYM
Trigger: CATGTACGCTGAAGGAGGCCAGTATAGCAATGCTGA...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATAGCGACCCCTCAAGGTaGATATTAAAACTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYSDPSR*ILKLKA
Trigger: TGCTTTCAGTTTTAATATCCACCTTGAGGGGTCGCT...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATTTCAGGTGGGAGAAATaGCCTGCTTTGCTAGAATAT +
Preference number: 4 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYFRWEK*PALLEY
Trigger: ATATTCTAGCAAAGCAGGCCATTTCTCCCACCTGAA...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp AGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGTCCAAATGCAAACTaGATATTCAAGGAACTTAGG +
Preference number: 4 (lower is better)
Translates to: RRSLFKVQKSQAPSVYEHSPNAN*IFKELR
Trigger: CCTAAGTTCCTTGAATATCCAGTTTGCATTTGGACT...GTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR TCA 90 bp AGCTCCCAAACTTTGCTGCACAAGTTCCAACTGGGAAATCTAAAAATCATGATGTCTGCATGTACATCTTaGAGCTTCAGTGCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: SSQTLLHKFQLGNLKIMMSACTS*SFSARK
Trigger: TTTTCTGGCACTGAAGCTTCAAGATGTACATGCAGA...CATCATGATTTTTAGATTTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR TCA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGCAAAGTCCCATCTGGTaGTGCAGGAAAGAAGAAGTT +
Preference number: 4 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRQSPIW*CRKEEV
Trigger: AACTTCTTCTTTCCTGCATCACCAGATGGGACTTTG...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR TCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTCAAAGTCCCATCTGGTaGTGCAGGAAAGAAGAAGTT +
Preference number: 4 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFQSPIW*CRKEEV
Trigger: AACTTCTTCTTTCCTGCATCACCAGATGGGACTTTG...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR GCA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGCCTATAGAACTTGGCTaGATAACGAAGGACGTAAGG +
Preference number: 4 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRPIELG*ITKDVR
Trigger: CCTTACGTCCTTCGTTATGCAGCCAAGTTCTATAGG...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR GCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTAAATGTCCTCAGCATTaGTATACTGGCCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFKCPQH*YTGLLQ
Trigger: CTGAAGGAGGCCAGTATAGCAATGCTGAGGACATTT...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATTGGATCTATCTTTTGTaGCTTCTCATAGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYWIYLL*LLIVLS
Trigger: GCTGAGTACTATGAGAAGGCACAAAAGATAGATCCA...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp GTACATGTTGGCCAGGTCTGTGTAGGCAAATGCAAACATAGAGTCTCGTTCCATATACGTGAGATACACTaGAGTATATATGTATGTCTG +
Preference number: 4 (lower is better)
Translates to: VHVGQVCVGKCKHRVSFHIREIH*SIYVCL
Trigger: CAGACATACATATATACTGCAGTGTATCTCACGTAT...ATGGAACGAGACTCTATGTTTGCATTTGCCTACACAGACCTGGCCAACATGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR GCA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACGGAGCTTGTTTAAAGTaGAGAAATCTCAGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: WPALLEYPKISERDKCVYGACLK*RNLRPL
Trigger: AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCC...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTGCCGATGTTAAATTCTaGATTGTCAGGCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFADVKF*IVRLHF
Trigger: GAAGTGGAGCCTGACAATCCAGAATTTAACATCGGC...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CCA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTCTTCAGCGTACATGTTaGCCAGGTCTGTGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: YTKYMMRSPNANWIFKELLQRTC*PGLCRQ
Trigger: TTGCCTACACAGACCTGGCCAACATGTACGCTGAAG...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR TCA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGTCTGCATGTACATCTTaGAGCTTCAGTGCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRSACTS*SFSARK
Trigger: TTTTCTGGCACTGAAGCTTCAAGATGTACATGCAGA...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR TCA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGGGGGTGATCTGTCTTTaGCCTTTAAGGCTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRGVICL*PLRLLN
Trigger: ATTTAGAAGCCTTAAAGGTCAAAGACAGATCACCCC...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR TCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTTCAGGACTTCAGTGCTaGCTTTCTGAAATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFSGLQC*LSEILE
Trigger: CTCAAGAATTTCAGAAAGTCAGCACTGAAGTCCTGA...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR TCA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACTCAGGACTTCAGTGCTaGCTTTCTGAAATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: WPALLEYPKISERDKCVYSGLQC*LSEILE
Trigger: CTCAAGAATTTCAGAAAGTCAGCACTGAAGTCCTGA...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR TCA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGTCAGGACTTCAGTGCTaGCTTTCTGAAATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRSGLQC*LSEILE
Trigger: CTCAAGAATTTCAGAAAGTCAGCACTGAAGTCCTGA...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATAGAAATTCAAGCTGTTaGCCAATTGTATCTTCTACC +
Preference number: 4 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYRNSSC*PIVSST
Trigger: GGTAGAAGATACAATTGGGCAACAGCTTGAATTTCT...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGTTCCCCTTCAGCTTCTaGATGTACATCTTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRFPFSF*MYILKL
Trigger: AAGCTTCAAGATGTACATGCAGAAGCTGAAGGGGAA...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR GCA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGGTCTGTGTAGGCAAATaGAAACATAGAGTCTCGTTC +
Preference number: 4 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRVCVGK*KHRVSF
Trigger: GAACGAGACTCTATGTTTGCATTTGCCTACACAGAC...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp AGCTCCCAAACTTTGCTGCACAAGTTCCAACTGGGAAATCTAAAAATCATGATGTGGATCTATCTTTTGTaGCTTCTCATAGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: SSQTLLHKFQLGNLKIMMWIYLL*LLIVLS
Trigger: GCTGAGTACTATGAGAAGGCACAAAAGATAGATCCA...CATCATGATTTTTAGATTTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTGCTCCCAAACTTTGCTaGACAAGTTCCAACTGGGAA +
Preference number: 4 (lower is better)
Translates to: YTKYMMRSPNANWIFKELAPKLC*TSSNWE
Trigger: TTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGC...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTTTCTCCTATAGAACTTaGCTGCATAACGAAGGACGT +
Preference number: 4 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFFSYRT*LHNEGR
Trigger: ACGTCCTTCGTTATGCAGCCAAGTTCTATAGGAGAA...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CCA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTTCAGCATTGCTATACTaGCCTCCTTCAGCGTACATG +
Preference number: 4 (lower is better)
Translates to: YTKYMMRSPNANWIFKELSALLY*PPSAYM
Trigger: CATGTACGCTGAAGGAGGCCAGTATAGCAATGCTGA...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACAGCGACCCCTCAAGGTaGATATTAAAACTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: WPALLEYPKISERDKCVYSDPSR*ILKLKA
Trigger: TGCTTTCAGTTTTAATATCCACCTTGAGGGGTCGCT...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp GGAGCTCACAGAGAGCAGTCAGGAATTCTGCATTTTCTGGATCTATCTTTTGTGGTTACATTGGAGGAATaGAGAATTAAATCACATGGT +
Preference number: 4 (lower is better)
Translates to: GAHREQSGILHFLDLSFVVTLEE*RIKSHG
Trigger: ACCATGTGATTTAATTCTCCATTCCTCCAATGTAAC...CACAAAAGATAGATCCAGAAAATGCAGAATTCCTGACTGCTCTCTGTGAGCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR CCA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTTTTACCTTGAGGGTGTaGAACTGTGGTAGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: YTKYMMRSPNANWIFKELFTLRV*NCGRVR
Trigger: TCTCACCCTACCACAGTTCCACACCCTCAAGGTAAA...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGTTCAGGTGGGAGAAATaGCCTGCTTTGCTAGAATAT +
Preference number: 4 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRFRWEK*PALLEY
Trigger: ATATTCTAGCAAAGCAGGCCATTTCTCCCACCTGAA...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGTTATGTACTTTCAGGTaGGAGAAATGGCCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRLCTFR*EKWPAL
Trigger: CAAAGCAGGCCATTTCTCCCACCTGAAAGTACATAA...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATAGTCCAAATGCAAACTaGATATTCAAGGAACTTAGG +
Preference number: 4 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYSPNAN*IFKELR
Trigger: CCTAAGTTCCTTGAATATCCAGTTTGCATTTGGACT...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR CAA 72 bp CTTACTTTTCACATGTCCATCAGTAGCTCCCAAACTTaGCTGCACAAGTTCCAACTGGGAAATCTAAAAATC +
Preference number: 4 (lower is better)
Translates to: LTFHMSISSSQT*LHKFQLGNLKI
Trigger: GATTTTTAGATTTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCTACTGATGGACATGTGAAAAGTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR TCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTACATCTAAAGCATTGTaGCAAAGTCTCTTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFTSKAL*QSLLVD
Trigger: GTCTACCAAGAGACTTTGTCACAATGCTTTAGATGT...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR TCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTCTGGAAGAGTATTCCTaGTCTAGGTATCAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFLEEYS*SRYQRF
Trigger: AAACCTTTGATACCTAGATCAGGAATACTCTTCCAG...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR TCA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACCCAAAGGCCAGAAATTaGGGGTATAAAAACTCCATT +
Preference number: 4 (lower is better)
Translates to: WPALLEYPKISERDKCVYPKARN*GYKNSI
Trigger: AATGGAGTTTTTATACCCTCAATTTCTGGCCTTTGG...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACGTCTCGTTCCATGGCTaGTTTGAAATGAAATATAGC +
Preference number: 4 (lower is better)
Translates to: WPALLEYPKISERDKCVYVSFHG*FEMKYS
Trigger: GCTATATTTCATTTCAAAGCAGCCATGGAACGAGAC...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGTGGATCTATCTTTTGTaGCTTCTCATAGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRWIYLL*LLIVLS
Trigger: GCTGAGTACTATGAGAAGGCACAAAAGATAGATCCA...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp AGCTCCCAAACTTTGCTGCACAAGTTCCAACTGGGAAATCTAAAAATCATGATGAAGTTTGAGGAACAATaGTGTAGACCTTACTACTCA +
Preference number: 4 (lower is better)
Translates to: SSQTLLHKFQLGNLKIMMKFEEQ*CRPYYS
Trigger: TGAGTAGTAAGGTCTACAGCATTGTTCCTCAAACTT...CATCATGATTTTTAGATTTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTGCAAGAACAGGAAACTaGAGATTGAATCAGATGCCG +
Preference number: 4 (lower is better)
Translates to: YTKYMMRSPNANWIFKELARTGN*RLNQMP
Trigger: CGGCATCTGATTCAATCTCCAGTTTCCTGTTCTTGC...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTAATATAGCTGTTATCTaGGTTCAGGGTAACAGCCTT +
Preference number: 4 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFNIAVI*VQGNSL
Trigger: AAGGCTGTTACCCTGAACCCAGATAACAGCTATATT...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CCA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACGGCTGGGATGATATTTaGTCCAGGATTTCTTCAATA +
Preference number: 4 (lower is better)
Translates to: WPALLEYPKISERDKCVYGWDDI*SRISSI
Trigger: TATTGAAGAAATCCTGGACCAAATATCATCCCAGCC...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CCA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGGGCTGGGATGATATTTaGTCCAGGATTTCTTCAATA +
Preference number: 4 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRGWDDI*SRISSI
Trigger: TATTGAAGAAATCCTGGACCAAATATCATCCCAGCC...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CCA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATGTAATTTTGTACTCCTaGAAGAGTATTCCTGATCTA +
Preference number: 4 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYVILYS*KSIPDL
Trigger: TAGATCAGGAATACTCTTCCAGGAGTACAAAATTAC...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTAAAAATCATGATGCCTaGACTGCACCCCATGCCAAT +
Preference number: 4 (lower is better)
Translates to: YTKYMMRSPNANWIFKELKNHDA*TAPHAN
Trigger: ATTGGCATGGGGTGCAGTCCAGGCATCATGATTTTT...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
3UTR CAA 72 bp ATAGGTCAGGACTTCAGTGCTGACTTTCTGAAATTCTaGAGTAAAGATCATTCCCTTCCTTGTTCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: IGQDFSADFLKF*SKDHSLPCSSL
Trigger: TAAGGAAGAACAAGGAAGGGAATGATCTTTACTCAAGAATTTCAGAAAGTCAGCACTGAAGTCCTGACCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR TCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTTCAAAACTAGTACACTaGAACCTTGGTAATCTATGG +
Preference number: 4 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFSKLVH*NLGNLW
Trigger: CCATAGATTACCAAGGTTTCAGTGTACTAGTTTTGA...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR TCA 90 bp AATAAAGTTGGTTGGAGTAGGGATTTTCTCAAGGTCCTCCTGATTTTAAAGTTCAGTAATCGGCATCGTTaGCTCAATCTGTATACTTCT +
Preference number: 4 (lower is better)
Translates to: NKVGWSRDFLKVLLILKFSNRHR*LNLYTS
Trigger: AGAAGTATACAGATTGAGTCAACGATGCCGATTACT...GAACTTTAAAATCAGGAGGACCTTGAGAAAATCCCTACTCCAACCAACTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681163.1
CDS-3UTR GCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTAGAAATTCAAGCTGTTaGCCAATTGTATCTTCTACC +
Preference number: 4 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFRNSSC*PIVSST
Trigger: GGTAGAAGATACAATTGGGCAACAGCTTGAATTTCT...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTGTCTGTGTAGGCAAATaGAAACATAGAGTCTCGTTC +
Preference number: 4 (lower is better)
Translates to: YTKYMMRSPNANWIFKELVCVGK*KHRVSF
Trigger: GAACGAGACTCTATGTTTGCATTTGCCTACACAGAC...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACAGCAGTCAGGAATTCTaGATTTTCTGGATCTATCTT +
Preference number: 4 (lower is better)
Translates to: WPALLEYPKISERDKCVYSSQEF*IFWIYL
Trigger: AAGATAGATCCAGAAAATGCAGAATTCCTGACTGCT...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGAGCAGTCAGGAATTCTaGATTTTCTGGATCTATCTT +
Preference number: 4 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRSSQEF*IFWIYL
Trigger: AAGATAGATCCAGAAAATGCAGAATTCCTGACTGCT...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACGAGTATGTATTTAAATaGAAAGTCGGAGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: WPALLEYPKISERDKCVYEYVFK*KVGAHR
Trigger: TCTGTGAGCTCCGACTTTCCATTTAAATACATACTC...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGGAGTATGTATTTAAATaGAAAGTCGGAGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRREYVFK*KVGAHR
Trigger: TCTGTGAGCTCCGACTTTCCATTTAAATACATACTC...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACCTCCCAATTTCCCAATaGCTGCTTTATATCTCAATA +
Preference number: 4 (lower is better)
Translates to: WPALLEYPKISERDKCVYLPISQ*LLYISI
Trigger: TATTGAGATATAAAGCAGCCATTGGGAAATTGGGAG...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTAGTCCAAATGCAAACTaGATATTCAAGGAACTTAGG +
Preference number: 4 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFSPNAN*IFKELR
Trigger: CCTAAGTTCCTTGAATATCCAGTTTGCATTTGGACT...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR TCA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTGATGGCAGTATTTTCTaGTTTACGGTGAAATTCCTG +
Preference number: 4 (lower is better)
Translates to: YTKYMMRSPNANWIFKELDGSIF*FTVKFL
Trigger: CAGGAATTTCACCGTAAATCAGAAAATACTGCCATC...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACTCTGTAACTAAAAAGTaGTGTCTTTTGCAAGCTACA +
Preference number: 4 (lower is better)
Translates to: WPALLEYPKISERDKCVYSVTKK*CLLQAT
Trigger: TGTAGCTTGCAAAAGACAGCACTTTTTAGTTACAGA...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTATACGTGAGATACACTaGAGTATATATGTATGTCTG +
Preference number: 4 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFIREIH*SIYVCL
Trigger: CAGACATACATATATACTGCAGTGTATCTCACGTAT...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGGTAATTTTGTACTCCTaGAAGAGTATTCCTGATCTA +
Preference number: 4 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRVILYS*KSIPDL
Trigger: TAGATCAGGAATACTCTTCCAGGAGTACAAAATTAC...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACGTTACATTGGAGGAATaGAGAATTAAATCACATGGT +
Preference number: 4 (lower is better)
Translates to: WPALLEYPKISERDKCVYVTLEE*RIKSHG
Trigger: ACCATGTGATTTAATTCTCCATTCCTCCAATGTAAC...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CCA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTGTTACATTGGAGGAATaGAGAATTAAATCACATGGT +
Preference number: 4 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFVTLEE*RIKSHG
Trigger: ACCATGTGATTTAATTCTCCATTCCTCCAATGTAAC...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR GCA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTAGCAGTCAGGAATTCTaGATTTTCTGGATCTATCTT +
Preference number: 4 (lower is better)
Translates to: YTKYMMRSPNANWIFKELSSQEF*IFWIYL
Trigger: AAGATAGATCCAGAAAATGCAGAATTCCTGACTGCT...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS CCA 90 bp GGATCGCTCTCTCCTCAGCACCGGGGACCGCGGGAAGCCGCGCGGTaGGCGTGCGCGTGCGCGTGCGCGCGCCAGGCCTCTGCAGCCCCT +
Preference number: 5 (lower is better)
Translates to: GSLSPQHRGPREAAR*ACACACARQASAAP
Trigger: AGGGGCTGCAGAGGCCTGGCGCGCGCACGCGCACGCGCACGCCCACCGCGCGGCTTCCCGCGGTCCCCGGTGCTGAGGAGAGAGCGATCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000681359.1
ENST00000681422.1
CDS GCA 90 bp AGCCGCGCGGTGGGCGTGCGCGTGCGCGTGCGCGCGCCAGGCCTCTaGAGCCCCTGGACTCGGCCGCGCGGCGTGTCTTTGTTAAAGGAG +
Preference number: 5 (lower is better)
Translates to: SRAVGVRVRVRAPGL*SPWTRPRGVSLLKE
Trigger: CTCCTTTAACAAAGACACGCCGCGCGGCCGAGTCCAGGGGCTGCAGAGGCCTGGCGCGCGCACGCGCACGCGCACGCCCACCGCGCGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000681359.1
ENST00000681422.1
CDS CCA 90 bp GTGGGCGTGCGCGTGCGCGTGCGCGCGCCAGGCCTCTGCAGCCCCTaGACTCGGCCGCGCGGCGTGTCTTTGTTAAAGGAGAGACCCCAG +
Preference number: 5 (lower is better)
Translates to: VGVRVRVRAPGLCSP*TRPRGVSLLKERPQ
Trigger: CTGGGGTCTCTCCTTTAACAAAGACACGCCGCGCGGCCGAGTCCAGGGGCTGCAGAGGCCTGGCGCGCGCACGCGCACGCGCACGCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000681359.1
ENST00000681422.1
CDS CCA 90 bp GGGAGCATCTCCTGTTCCTCCTCCCTGACCGGCCTTCTTAGGCGCTaGGGAGGGGCCGGACTCCCGAGAAGCGTCCACTCGGCCACCCTC +
Preference number: 5 (lower is better)
Translates to: GSISCSSSLTGLLRR*GGAGLPRSVHSATL
Trigger: GAGGGTGGCCGAGTGGACGCTTCTCGGGAGTCCGGCCCCTCCCCAGCGCCTAAGAAGGCCGGTCAGGGAGGAGGAACAGGAGATGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680591.1
CDS CCA 90 bp TCCTTACGAATTTCACCTGACAGTCCCGACCGCAGACGCCAGGGATaGGACAGGCTCCCGGGGAGCATCTCCTGTTCCTCCTCCCTGACC +
Preference number: 5 (lower is better)
Translates to: SLRISPDSPDRRRQG*DRLPGSISCSSSLT
Trigger: GGTCAGGGAGGAGGAACAGGAGATGCTCCCCGGGAGCCTGTCCCATCCCTGGCGTCTGCGGTCGGGACTGTCAGGTGAAATTCGTAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680591.1
CDS-3UTR CAA 90 bp AGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGAGCACTTGTCAGTTaGGTGCGAAGGGGTGATCTG +
Preference number: 5 (lower is better)
Translates to: RRSLFKVQKSQAPSVYEHRALVS*VRRGDL
Trigger: CAGATCACCCCTTCGCACCAAACTGACAAGTGCTCT...GTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGCCGCGCGGCGTGTCTTaGTTAAAGGAGAGACCCCAG +
Preference number: 5 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRPRGVS*LKERPQ
Trigger: CTGGGGTCTCTCCTTTAACAAAGACACGCCGCGCGG...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CAA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTGATTATTTCTTCTGCTaGTTCCAAGCACTCAAGGGC +
Preference number: 5 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLDYFFC*FQALKG
Trigger: GCCCTTGAGTGCTTGGAACAAGCAGAAGAAATAATC...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTAAAATGTCCTCAGCATaGCTATACTGGCCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLKMSSA*LYWPPS
Trigger: TGAAGGAGGCCAGTATAGCAATGCTGAGGACATTTT...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTTTCTGCATGTACATCTaGAAGCTTCAGTGCCAGAAA +
Preference number: 5 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLFCMYI*KLQCQK
Trigger: TTTCTGGCACTGAAGCTTCAAGATGTACATGCAGAA...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CAA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTTTTCCTTTAGGTCTGTaGTGTGTGGCCTTCTTGATT +
Preference number: 5 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLFPLGL*CVAFLI
Trigger: AATCAAGAAGGCCACACACAACAGACCTAAAGGAAA...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATACAGGAAACTGGAGATaGAATCAGATGCCGAGCGCT +
Preference number: 5 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYTGNWR*NQMPSA
Trigger: AGCGCTCGGCATCTGATTCAATCTCCAGTTTCCTGT...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CAA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTCCGCGCGGCGTGTCTTaGTTAAAGGAGAGACCCCAG +
Preference number: 5 (lower is better)
Translates to: YTKYMMRSPNANWIFKELPRGVS*LKERPQ
Trigger: CTGGGGTCTCTCCTTTAACAAAGACACGCCGCGCGG...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CAA 90 bp AATGGAAAGTCGGAGCTCACAGAGAGCAGTCAGGAATTCTGCATTTTCTGGATCGATTATTTCTTCTGCTaGTTCCAAGCACTCAAGGGC +
Preference number: 5 (lower is better)
Translates to: NGKSELTESSQEFCIFWIDYFFC*FQALKG
Trigger: GCCCTTGAGTGCTTGGAACAAGCAGAAGAAATAATC...GATCCAGAAAATGCAGAATTCCTGACTGCTCTCTGTGAGCTCCGACTTTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR CAA 90 bp AGCTCCCAAACTTTGCTGCACAAGTTCCAACTGGGAAATCTAAAAATCATGATGGCAGGAAAGAAGAAGTaGGTGTCACCTCCAAGGCCT +
Preference number: 5 (lower is better)
Translates to: SSQTLLHKFQLGNLKIMMAGKKK*VSPPRP
Trigger: AGGCCTTGGAGGTGACACCAACTTCTTCTTTCCTGC...CATCATGATTTTTAGATTTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CAA 90 bp AGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAAAATGTCCTCAGCATaGCTATACTGGCCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: RRSLFKVQKSQAPSVYEHKMSSA*LYWPPS
Trigger: TGAAGGAGGCCAGTATAGCAATGCTGAGGACATTTT...GTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp AGCTCCCAAACTTTGCTGCACAAGTTCCAACTGGGAAATCTAAAAATCATGATGAGAGCACTTGTCAGTTaGGTGCGAAGGGGTGATCTG +
Preference number: 5 (lower is better)
Translates to: SSQTLLHKFQLGNLKIMMRALVS*VRRGDL
Trigger: CAGATCACCCCTTCGCACCAAACTGACAAGTGCTCT...CATCATGATTTTTAGATTTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp AGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACTTCTGCATGTACATCTaGAAGCTTCAGTGCCAGAAA +
Preference number: 5 (lower is better)
Translates to: RRSLFKVQKSQAPSVYEHFCMYI*KLQCQK
Trigger: TTTCTGGCACTGAAGCTTCAAGATGTACATGCAGAA...GTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CAA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGGCAGGAAAGAAGAAGTaGGTGTCACCTCCAAGGCCT +
Preference number: 5 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRAGKKK*VSPPRP
Trigger: AGGCCTTGGAGGTGACACCAACTTCTTCTTTCCTGC...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CAA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATATTTCTTCAGAGCACTaGTCAGTTTGGTGCGAAGGG +
Preference number: 5 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYISSEH*SVWCEG
Trigger: CCCTTCGCACCAAACTGACAAGTGCTCTGAAGAAAT...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp CAGCATCCTCACCTAGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTAGATCATTCCCTTCCTaGTTCTTCCTTAATAGATCA +
Preference number: 5 (lower is better)
Translates to: QHPHLGGACLKCRNLRPLRSFPS*FFLNRS
Trigger: TGATCTATTAAGGAAGAACAAGGAAGGGAATGATCT...AAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCTAGGTGAGGATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACACAGGAAACTGGAGATaGAATCAGATGCCGAGCGCT +
Preference number: 5 (lower is better)
Translates to: WPALLEYPKISERDKCVYTGNWR*NQMPSA
Trigger: AGCGCTCGGCATCTGATTCAATCTCCAGTTTCCTGT...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CAA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATAAAATGTCCTCAGCATaGCTATACTGGCCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYKMSSA*LYWPPS
Trigger: TGAAGGAGGCCAGTATAGCAATGCTGAGGACATTTT...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp AGCTCCCAAACTTTGCTGCACAAGTTCCAACTGGGAAATCTAAAAATCATGATGATAGTACTCAGCAGCTaGCCTCTTTTCTCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: SSQTLLHKFQLGNLKIMMIVLSS*PLFSFQ
Trigger: CTGGAAGGAGAAAAGAGGCAAGCTGCTGAGTACTAT...CATCATGATTTTTAGATTTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp AGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAAGAAATTCAAGCTGTaGCCCAATTGTATCTTCTAC +
Preference number: 5 (lower is better)
Translates to: RRSLFKVQKSQAPSVYEHKKFKL*PNCIFY
Trigger: GTAGAAGATACAATTGGGCAACAGCTTGAATTTCTT...GTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp AAGGTCCTCCTGATTTTAAAGTTCTGTGTTGTCTACAAGGTTGTTCCTGAACTGGATTATTTCTTCTGCTaGTTCCAAGCACTCAAGGGC +
Preference number: 5 (lower is better)
Translates to: KVLLILKFCVVYKVVPELDYFFC*FQALKG
Trigger: GCCCTTGAGTGCTTGGAACAAGCAGAAGAAATAATC...CAGTTCAGGAACAACCTTGTAGACAACACAGAACTTTAAAATCAGGAGGACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681163.1
CDS-3UTR CAA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTATTTCTTCAGAGCACTaGTCAGTTTGGTGCGAAGGG +
Preference number: 5 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFISSEH*SVWCEG
Trigger: CCCTTCGCACCAAACTGACAAGTGCTCTGAAGAAAT...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGATAGTACTCAGCAGCTaGCCTCTTTTCTCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRIVLSS*PLFSFQ
Trigger: CTGGAAGGAGAAAAGAGGCAAGCTGCTGAGTACTAT...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp TATGTTCTCCAGACGAAGAGCTTTCCGGAAAATGTCCTCAGCATTGCTATACTGTTCTGGATCTATCTTTaGTGCCTTCTCATAGTACTC +
Preference number: 5 (lower is better)
Translates to: YVLQTKSFPENVLSIAILFWIYL*CLLIVL
Trigger: GAGTACTATGAGAAGGCACAAAAGATAGATCCAGAA...CAGTATAGCAATGCTGAGGACATTTTCCGGAAAGCTCTTCGTCTGGAGAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR CAA 90 bp AGGAGGAGCTTGTTTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACCTACTTAATAAACATTaGGGGATTGAATCCCTGAAG +
Preference number: 5 (lower is better)
Translates to: RRSLFKVQKSQAPSVYEHLLNKH*GIESLK
Trigger: CTTCAGGGATTCAATCCCCAAATGTTTATTAAGTAG...GTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAAACAAGCTCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp GTACATGTTGGCCAGGTCTGTGTAGGCAAATGCAAACATAGAGTCTCGTTCCATAGATCATTCCCTTCCTaGTTCTTCCTTAATAGATCA +
Preference number: 5 (lower is better)
Translates to: VHVGQVCVGKCKHRVSFHRSFPS*FFLNRS
Trigger: TGATCTATTAAGGAAGAACAAGGAAGGGAATGATCT...ATGGAACGAGACTCTATGTTTGCATTTGCCTACACAGACCTGGCCAACATGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS TCA 90 bp GGTCCTCCTGATTTTAAAGTTCTGTGTTGTCTACAAGGTTGTTCCTaGACTGAAGTAATCGGCATCGTTGACTCAATCTGTATACTTCTG +
Preference number: 5 (lower is better)
Translates to: GPPDFKVLCCLQGCS*TEVIGIVDSICILL
Trigger: CAGAAGTATACAGATTGAGTCAACGATGCCGATTACTTCAGTTCAGGAACAACCTTGTAGACAACACAGAACTTTAAAATCAGGAGGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681163.1
CDS-3UTR CAA 90 bp TTAAAGTGCAGAAATCTCAGGCCCCTTCTGTGTATGAACACAGCCCTGATTTATTTCTGGATCTATCTTTaGTGCCTTCTCATAGTACTC +
Preference number: 5 (lower is better)
Translates to: LKCRNLRPLLCMNTALIYFWIYL*CLLIVL
Trigger: GAGTACTATGAGAAGGCACAAAAGATAGATCCAGAA...ATAAATCAGGGCTGTGTTCATACACAGAAGGGGCCTGAGATTTCTGCACTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp TATGTTCTCCAGACGAAGAGCTTTCCGGAAAATGTCCTCAGCATTGCTATACTGCTACTTAATAAACATTaGGGGATTGAATCCCTGAAG +
Preference number: 5 (lower is better)
Translates to: YVLQTKSFPENVLSIAILLLNKH*GIESLK
Trigger: CTTCAGGGATTCAATCCCCAAATGTTTATTAAGTAG...CAGTATAGCAATGCTGAGGACATTTTCCGGAAAGCTCTTCGTCTGGAGAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679632.1
CDS-3UTR CAA 90 bp AGCTCCCAAACTTTGCTGCACAAGTTCCAACTGGGAAATCTAAAAATCATGATGAGTTATAAGTTTACCTaGAGGGTGTGGAACTGTGGT +
Preference number: 5 (lower is better)
Translates to: SSQTLLHKFQLGNLKIMMSYKFT*RVWNCG
Trigger: ACCACAGTTCCACACCCTCAAGGTAAACTTATAACT...CATCATGATTTTTAGATTTCCCAGTTGGAACTTGTGCAGCAAAGTTTGGGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp ATTTTGTACTCCTGGAAGAGTATTCCTGATCTAGGTATCAAAGGTTTACGTAGGATGTTAAATTCTGGATaGTCAGGCTCCACTTCCAGA +
Preference number: 5 (lower is better)
Translates to: ILYSWKSIPDLGIKGLRRMLNSG*SGSTSR
Trigger: TCTGGAAGTGGAGCCTGACAATCCAGAATTTAACAT...CCTACGTAAACCTTTGATACCTAGATCAGGAATACTCTTCCAGGAGTACAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CAA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTATGTTAAATTCTGGATaGTCAGGCTCCACTTCCAGA +
Preference number: 5 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFMLNSG*SGSTSR
Trigger: TCTGGAAGTGGAGCCTGACAATCCAGAATTTAACAT...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681422.1
CDS-3UTR CAA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTTTTCCTTTAGGTCTGTaGTGTGTGGCCTTCTTGATT +
Preference number: 5 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFFPLGL*CVAFLI
Trigger: AATCAAGAAGGCCACACACAACAGACCTAAAGGAAA...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTATTTCTTCAGAGCACTaGTCAGTTTGGTGCGAAGGG +
Preference number: 5 (lower is better)
Translates to: YTKYMMRSPNANWIFKELISSEH*SVWCEG
Trigger: CCCTTCGCACCAAACTGACAAGTGCTCTGAAGAAAT...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTATAGTACTCAGCAGCTaGCCTCTTTTCTCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: YTKYMMRSPNANWIFKELIVLSS*PLFSFQ
Trigger: CTGGAAGGAGAAAAGAGGCAAGCTGCTGAGTACTAT...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp TGGAACTGTGGTAGGGTGAGAGGACTGCTCTCATTTTTAAATTCACATACTTTTAGTTATAAGTTTACCTaGAGGGTGTGGAACTGTGGT +
Preference number: 5 (lower is better)
Translates to: WNCGRVRGLLSFLNSHTFSYKFT*RVWNCG
Trigger: ACCACAGTTCCACACCCTCAAGGTAAACTTATAACT...AAAAGTATGTGAATTTAAAAATGAGAGCAGTCCTCTCACCCTACCACAGTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTGATTATTTCTTCTGCTaGTTCCAAGCACTCAAGGGC +
Preference number: 5 (lower is better)
Translates to: YTKYMMRSPNANWIFKELDYFFC*FQALKG
Trigger: GCCCTTGAGTGCTTGGAACAAGCAGAAGAAATAATC...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACTTCTGGATCTATCTTTaGTGCCTTCTCATAGTACTC +
Preference number: 5 (lower is better)
Translates to: WPALLEYPKISERDKCVYFWIYL*CLLIVL
Trigger: GAGTACTATGAGAAGGCACAAAAGATAGATCCAGAA...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp TATACCAAGTATATGATGAGGAGTCCAAATGCAAACTGGATATTCAAGGAACTTTTTCCTTTAGGTCTGTaGTGTGTGGCCTTCTTGATT +
Preference number: 5 (lower is better)
Translates to: YTKYMMRSPNANWIFKELFPLGL*CVAFLI
Trigger: AATCAAGAAGGCCACACACAACAGACCTAAAGGAAA...AAGTTCCTTGAATATCCAGTTTGCATTTGGACTCCTCATCATATACTTGGTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS-3UTR CAA 90 bp TGGCCTGCTTTGCTAGAATATCCTAAAATATCTGAAAGGGACAAATGTGTCTACAGATCATTCCCTTCCTaGTTCTTCCTTAATAGATCA +
Preference number: 5 (lower is better)
Translates to: WPALLEYPKISERDKCVYRSFPS*FFLNRS
Trigger: TGATCTATTAAGGAAGAACAAGGAAGGGAATGATCT...GTAGACACATTTGTCCCTTTCAGATATTTTAGGATATTCTAGCAAAGCAGGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000681422.1
CDS GCA 72 bp GTGGGCGTGCGCGTGCGCGTGCGCGCGCCAGGCCTCTaGAGCCCCTGGACTCGGCCGCGCGGCGTGTCTTTG +
Preference number: 6 (lower is better)
Translates to: VGVRVRVRAPGL*SPWTRPRGVSL
Trigger: CAAAGACACGCCGCGCGGCCGAGTCCAGGGGCTGCAGAGGCCTGGCGCGCGCACGCGCACGCGCACGCCCAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371795.5
ENST00000681359.1
ENST00000681422.1
CDS GCA 72 bp AAAGGCCGCAGAACTGCGCTCATGATGGCAGCGCTCTaGAGGCCGTCCGGGCGGCGCAGTCCCTCGGATCGC +
Preference number: 6 (lower is better)
Translates to: KGRRTALMMAAL*RPSGRRSPSDR
Trigger: GCGATCCGAGGGACTGCGCCGCCCGGACGGCCTGCAGAGCGCTGCCATCATGAGCGCAGTTCTGCGGCCTTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681359.1
CDS CCA 72 bp TCCTGTTCCTCCTCCCTGACCGGCCTTCTTAGGCGCTaGGGAGGGGCCGGACTCCCGAGAAGCGTCCACTCG +
Preference number: 6 (lower is better)
Translates to: SCSSSLTGLLRR*GGAGLPRSVHS
Trigger: CGAGTGGACGCTTCTCGGGAGTCCGGCCCCTCCCCAGCGCCTAAGAAGGCCGGTCAGGGAGGAGGAACAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680591.1
CDS GCA 72 bp GTGTCCTTACGAATTTCACTCATGATGGCAGCGCTCTaGAGGCCGTCCGGGCGGCGCAGTCCCTCGGATCGC +
Preference number: 6 (lower is better)
Translates to: VSLRISLMMAAL*RPSGRRSPSDR
Trigger: GCGATCCGAGGGACTGCGCCGCCCGGACGGCCTGCAGAGCGCTGCCATCATGAGTGAAATTCGTAAGGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371795.5
ENST00000681163.1
CDS CCA 72 bp ATTTCACCTGACAGTCCCGACCGCAGACGCCAGGGATaGGACAGGCTCCCGGGGAGCATCTCCTGTTCCTCC +
Preference number: 6 (lower is better)
Translates to: ISPDSPDRRRQG*DRLPGSISCSS
Trigger: GGAGGAACAGGAGATGCTCCCCGGGAGCCTGTCCCATCCCTGGCGTCTGCGGTCGGGACTGTCAGGTGAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680591.1
CDS GCA 72 bp ACTGTCAAAGATAAAATACTCATGATGGCAGCGCTCTaGAGGCCGTCCGGGCGGCGCAGTCCCTCGGATCGC +
Preference number: 6 (lower is better)
Translates to: TVKDKILMMAAL*RPSGRRSPSDR
Trigger: GCGATCCGAGGGACTGCGCCGCCCGGACGGCCTGCAGAGCGCTGCCATCATGAGTATTTTATCTTTGACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681422.1
CDS GCA 72 bp ACCAGGCTTCGTACTTCTTCTTTGTCTGAGTGTTCTTaGTGGATTATTTCTTCTGCTTGTTCCAAGCACTCA +
Preference number: 6 (lower is better)
Translates to: TRLRTSSLSECS*WIISSACSKHS
Trigger: TGAGTGCTTGGAACAAGCAGAAGAAATAATCCAGCAAGAACACTCAGACAAAGAAGAAGTACGAAGCCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000680591.1
ENST00000681163.1
ENST00000681348.1
ENST00000681422.1
CDS TCA 72 bp GATTTTAAAGTTCTGTGTTGTCTACAAGGTTGTTCCTaGACTGAAGTAATCGGCATCGTTGACTCAATCTGT +
Preference number: 6 (lower is better)
Translates to: DFKVLCCLQGCS*TEVIGIVDSIC
Trigger: ACAGATTGAGTCAACGATGCCGATTACTTCAGTTCAGGAACAACCTTGTAGACAACACAGAACTTTAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681163.1
CDS GCA 72 bp GCAAGTCTAGATTTTGTGGTAAGAAATTCAAGCTGTTaGCCAATTGTATCTTCTACCTCAAACAGATCAATG +
Preference number: 6 (lower is better)
Translates to: ASLDFVVRNSSC*PIVSSTSNRSM
Trigger: CATTGATCTGTTTGAGGTAGAAGATACAATTGGGCAACAGCTTGAATTTCTTACCACAAAATCTAGACTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000680591.1
ENST00000681163.1
ENST00000681348.1
ENST00000681422.1
CDS CAA 72 bp AGCAAGTCTAGATTTTGTGGTAAGAAATTCAAGCTGTaGCCCAATTGTATCTTCTACCTCAAACAGATCAAT +
Preference number: 6 (lower is better)
Translates to: SKSRFCGKKFKL*PNCIFYLKQIN
Trigger: ATTGATCTGTTTGAGGTAGAAGATACAATTGGGCAACAGCTTGAATTTCTTACCACAAAATCTAGACTTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371795.5
ENST00000679632.1
ENST00000680591.1
ENST00000681163.1
ENST00000681348.1
ENST00000681422.1