Pregenerated sensors for IFIT1B (Homo sapiens)
Ensembl gene IDs: ENSG00000204010Ensembl transcript IDs: ENST00000371809.3
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCTATGTTCCAAGAAAGATTGCTTTACCATTCCATCAGGAGGGATaGTACTTTCAGGGGGTCTTATGTCTGGTGCCACAAGGCCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: CYVPRKIALPFHQEG*YFQGVLCLVPQGLS Trigger: GGAAAGGCCTTGTGGCACCAGACATAAGACCCCCTGAAAGTATCATCCCTCCTGATGGAATGGTAAAGCAATCTTTCTTGGAACATAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| 3UTR CCA 90 bp | CAAAGCTTGAGGGTAACCACTCAGGAAATACAGACACCTAATGACTaGAGTCAGCATTCCAAAATGGGGAAGTTAAGATTTCACTTACAT | + |
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Preference number: 1 (lower is better) Translates to: QSLRVTTQEIQTPND*SQHSKMGKLRFHLH Trigger: ATGTAAGTGAAATCTTAACTTCCCCATTTTGGAATGCTGACTCCAGTCATTAGGTGTCTGTATTTCCTGAGTGGTTACCCTCAAGCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| 3UTR-3UTR GCA 90 bp | ATTCCATCAGGAGGGATGATACTTTCAGGGGGTCTTATGTCTGGTGCCACAAGGGAAGTTGCAGTTGCATaGTACATAACTCAGGCCACA | + |
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Preference number: 2 (lower is better) Translates to: IPSGGMILSGGLMSGATREVAVA*YITQAT Trigger: TGTGGCCTGAGTTATGTAGCATGCAACTGCAACTTC...CCTTGTGGCACCAGACATAAGACCCCCTGAAAGTATCATCCCTCCTGATGGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| 3UTR-3UTR GCA 90 bp | ACTCAGGAAATACAGACACCTAATGACTGGAGTCAGCATTCCAAAATGGGGAAGGGGTCTTATGTCTGGTaGCACAAGGCCTTTCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: TQEIQTPNDWSQHSKMGKGSYVW*HKAFPD Trigger: ATCAGGAAAGGCCTTGTGGCACCAGACATAAGACCC...CTTCCCCATTTTGGAATGCTGACTCCAGTCATTAGGTGTCTGTATTTCCTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| 3UTR-3UTR GCA 90 bp | AGCAATTTGATCGGTTACTACTTGCTATGTTCCAAGAAAGATTGCTTTACCATTGGAAAAAGCAGAAGTTaGAGTTGCATGCTACATAAC | + |
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Preference number: 2 (lower is better) Translates to: SNLIGYYLLCSKKDCFTIGKSRS*SCMLHN Trigger: GTTATGTAGCATGCAACTGCAACTTCTGCTTTTTCC...AATGGTAAAGCAATCTTTCTTGGAACATAGCAAGTAGTAACCGATCAAATTGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| 3UTR TCA 72 bp | CAGGGGGTCTTATGTCTGGTGCCACAAGGCCTTTCCTaGTCATTTACAGGAAAAAGCAGAAGTTGCAGTTGC | + |
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Preference number: 3 (lower is better) Translates to: QGVLCLVPQGLS*SFTGKSRSCSC Trigger: GCAACTGCAACTTCTGCTTTTTCCTGTAAATGATCAGGAAAGGCCTTGTGGCACCAGACATAAGACCCCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| 3UTR CCA 72 bp | ATCAGGAGGGATGATACTTTCAGGGGGTCTTATGTCTaGTGCCACAAGGCCTTTCCTGATCATTTACAGGAA | + |
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Preference number: 3 (lower is better) Translates to: IRRDDTFRGSYV*CHKAFPDHLQE Trigger: TTCCTGTAAATGATCAGGAAAGGCCTTGTGGCACCAGACATAAGACCCCCTGAAAGTATCATCCCTCCTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| 3UTR TCA 72 bp | CCAAGAAAGATTGCTTTACCATTCCATCAGGAGGGATaGTACTTTCAGGGGGTCTTATGTCTGGTGCCACAA | + |
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Preference number: 3 (lower is better) Translates to: PRKIALPFHQEG*YFQGVLCLVPQ Trigger: TTGTGGCACCAGACATAAGACCCCCTGAAAGTATCATCCCTCCTGATGGAATGGTAAAGCAATCTTTCTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| 3UTR GCA 72 bp | GATCATTTACAGGAAAAAGCAGAAGTTGCAGTTGCATaGTACATAACTCAGGCCACACAGCCACATTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: DHLQEKAEVAVA*YITQATQPHSS Trigger: AGAGGAATGTGGCTGTGTGGCCTGAGTTATGTAGCATGCAACTGCAACTTCTGCTTTTTCCTGTAAATGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| 3UTR CCA 72 bp | AGGGTAACCACTCAGGAAATACAGACACCTAATGACTaGAGTCAGCATTCCAAAATGGGGAAGTTAAGATTT | + |
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Preference number: 3 (lower is better) Translates to: RVTTQEIQTPND*SQHSKMGKLRF Trigger: AAATCTTAACTTCCCCATTTTGGAATGCTGACTCCAGTCATTAGGTGTCTGTATTTCCTGAGTGGTTACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR CCA 90 bp | CCATCAGGAGGGATGATACTTTCAGGGGGTCTTATGTCTGGTGCCACAAGGCCTTCCTCAGCCTTTCTGTaGTGGCCTATTTCTGCATAC | + |
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Preference number: 4 (lower is better) Translates to: PSGGMILSGGLMSGATRPSSAFL*WPISAY Trigger: GTATGCAGAAATAGGCCACCACAGAAAGGCTGAGGA...AGGCCTTGTGGCACCAGACATAAGACCCCCTGAAAGTATCATCCCTCCTGATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR TCA 90 bp | CCATCAGGAGGGATGATACTTTCAGGGGGTCTTATGTCTGGTGCCACAAGGCCTCCACAAGGCCTTTCCTaGTCATTTACAGGAAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: PSGGMILSGGLMSGATRPPQGLS*SFTGKS Trigger: GCTTTTTCCTGTAAATGATCAGGAAAGGCCTTGTGG...AGGCCTTGTGGCACCAGACATAAGACCCCCTGAAAGTATCATCCCTCCTGATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR GCA 90 bp | ATTCCATCAGGAGGGATGATACTTTCAGGGGGTCTTATGTCTGGTGCCACAAGGGGGTCTTATGTCTGGTaGCACAAGGCCTTTCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: IPSGGMILSGGLMSGATRGSYVW*HKAFPD Trigger: ATCAGGAAAGGCCTTGTGGCACCAGACATAAGACCC...CCTTGTGGCACCAGACATAAGACCCCCTGAAAGTATCATCCCTCCTGATGGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR GCA 90 bp | CATTCCATCAGGAGGGATGATACTTTCAGGGGGTCTTATGTCTGGTGCCACAAGACAGTTTCCCTATCTTaGCCTCTAGGCTGCCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: HSIRRDDTFRGSYVWCHKTVSLS*PLGCQF Trigger: AAACTGGCAGCCTAGAGGGCAAGATAGGGAAACTGT...CTTGTGGCACCAGACATAAGACCCCCTGAAAGTATCATCCCTCCTGATGGAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR GCA 90 bp | CCATCAGGAGGGATGATACTTTCAGGGGGTCTTATGTCTGGTGCCACAAGGCCTGGAAAAAGCAGAAGTTaGAGTTGCATGCTACATAAC | + |
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Preference number: 4 (lower is better) Translates to: PSGGMILSGGLMSGATRPGKSRS*SCMLHN Trigger: GTTATGTAGCATGCAACTGCAACTTCTGCTTTTTCC...AGGCCTTGTGGCACCAGACATAAGACCCCCTGAAAGTATCATCCCTCCTGATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR GCA 90 bp | CATTCCATCAGGAGGGATGATACTTTCAGGGGGTCTTATGTCTGGTGCCACAAGGGCAGTAAACAGGGTTaGAGCATTTTCCACATAAGG | + |
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Preference number: 4 (lower is better) Translates to: HSIRRDDTFRGSYVWCHKGSKQG*SIFHIR Trigger: CCTTATGTGGAAAATGCTGCAACCCTGTTTACTGCC...CTTGTGGCACCAGACATAAGACCCCCTGAAAGTATCATCCCTCCTGATGGAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR CCA 90 bp | TCCATCAGGAGGGATGATACTTTCAGGGGGTCTTATGTCTGGTGCCACAAGGCCCCTGTGAAGATATACTaGTCAGAGCTTCTTCAATGT | + |
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Preference number: 4 (lower is better) Translates to: SIRRDDTFRGSYVWCHKAPVKIY*SELLQC Trigger: ACATTGAAGAAGCTCTGACCAGTATATCTTCACAGG...GGCCTTGTGGCACCAGACATAAGACCCCCTGAAAGTATCATCCCTCCTGATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR CCA 90 bp | CATTCCATCAGGAGGGATGATACTTTCAGGGGGTCTTATGTCTGGTGCCACAAGTCAGCCTTTCTGTGGTaGCCTATTTCTGCATACGTT | + |
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Preference number: 4 (lower is better) Translates to: HSIRRDDTFRGSYVWCHKSAFLW*PISAYV Trigger: AACGTATGCAGAAATAGGCCACCACAGAAAGGCTGA...CTTGTGGCACCAGACATAAGACCCCCTGAAAGTATCATCCCTCCTGATGGAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR TCA 90 bp | TGCAGTTGCATGCTACATAACTCAGGCCACACAGCCACATTCCTCTCAAGGCTCTTGCATATAGCCAATTaGACCAATCTGTCCACAGTT | + |
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Preference number: 4 (lower is better) Translates to: CSCMLHNSGHTATFLSRLLHIAN*TNLSTV Trigger: AACTGTGGACAGATTGGTTCAATTGGCTATATGCAA...GAGCCTTGAGAGGAATGTGGCTGTGTGGCCTGAGTTATGTAGCATGCAACTGCA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR TCA 90 bp | ATTCCATCAGGAGGGATGATACTTTCAGGGGGTCTTATGTCTGGTGCCACAAGGATGCGTAACCCTTTCTaGAAATGTTCCTCAGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: IPSGGMILSGGLMSGATRMRNPF*KCSSAF Trigger: AAAGGCTGAGGAACATTTTCAGAAAGGGTTACGCAT...CCTTGTGGCACCAGACATAAGACCCCCTGAAAGTATCATCCCTCCTGATGGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR CCA 90 bp | ACTCAGGAAATACAGACACCTAATGACTGGAGTCAGCATTCCAAAATGGGGAAGGCTTTGGTTCAGGCTTaGAGGCTCCTTCAAGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: TQEIQTPNDWSQHSKMGKALVQA*RLLQGS Trigger: TGAACCTTGAAGGAGCCTCCAAGCCTGAACCAAAGC...CTTCCCCATTTTGGAATGCTGACTCCAGTCATTAGGTGTCTGTATTTCCTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR CCA 90 bp | ATTCCATCAGGAGGGATGATACTTTCAGGGGGTCTTATGTCTGGTGCCACAAGGTTCCCACATTGTATTTaGTGTCCAGGAACTGAATCT | + |
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Preference number: 4 (lower is better) Translates to: IPSGGMILSGGLMSGATRFPHCI*CPGTES Trigger: AGATTCAGTTCCTGGACACCAAATACAATGTGGGAA...CCTTGTGGCACCAGACATAAGACCCCCTGAAAGTATCATCCCTCCTGATGGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR TCA 90 bp | ACTCAGGAAATACAGACACCTAATGACTGGAGTCAGCATTCCAAAATGGGGAAGTATGAAGATAGCAGGTaGTCTGTAGTGCTTTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: TQEIQTPNDWSQHSKMGKYEDSR*SVVLWF Trigger: GAACCAAAGCACTACAGATCACCTGCTATCTTCATA...CTTCCCCATTTTGGAATGCTGACTCCAGTCATTAGGTGTCTGTATTTCCTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR TCA 90 bp | AAAGATTGCTTTACCATTCCATCAGGAGGGATGATACTTTCAGGGGGTCTTATGAAAGACATAGGCCTGTaGAGATATACTGGTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: KDCFTIPSGGMILSGGLMKDIGL*RYTGQS Trigger: GCTCTGACCAGTATATCTTCACAGGCCTATGTCTTT...CATAAGACCCCCTGAAAGTATCATCCCTCCTGATGGAATGGTAAAGCAATCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR GCA 90 bp | AAAGATTGCTTTACCATTCCATCAGGAGGGATGATACTTTCAGGGGGTCTTATGGCGATAGACGGTGATTaGGTACCCAGTATTGAATTC | + |
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Preference number: 4 (lower is better) Translates to: KDCFTIPSGGMILSGGLMAIDGD*VPSIEF Trigger: GAATTCAATACTGGGTACGCAATCACCGTCTATCGC...CATAAGACCCCCTGAAAGTATCATCCCTCCTGATGGAATGGTAAAGCAATCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR GCA 90 bp | CCTAATGACTGGAGTCAGCATTCCAAAATGGGGAAGTTAAGATTTCACTTACATGTGGTGGCCTATTTCTaGATACGTTTCAGCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: PNDWSQHSKMGKLRFHLHVVAYF*IRFSQV Trigger: GACCTGGCTGAAACGTATGCAGAAATAGGCCACCAC...ATGTAAGTGAAATCTTAACTTCCCCATTTTGGAATGCTGACTCCAGTCATTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR GCA 90 bp | CATTCCATCAGGAGGGATGATACTTTCAGGGGGTCTTATGTCTGGTGCCACAAGCTTCAAAGATCTTCATaGGTAACCCTTTCTGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: HSIRRDDTFRGSYVWCHKLQRSS*VTLSEN Trigger: ATTTTCAGAAAGGGTTACGCATGAAGATCTTTGAAG...CTTGTGGCACCAGACATAAGACCCCCTGAAAGTATCATCCCTCCTGATGGAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR TCA 90 bp | CCTAATGACTGGAGTCAGCATTCCAAAATGGGGAAGTTAAGATTTCACTTACATCATCTGGATTTAGCCTaGCAGCTCGTTTTAGGACGT | + |
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Preference number: 4 (lower is better) Translates to: PNDWSQHSKMGKLRFHLHHLDLA*QLVLGR Trigger: ACGTCCTAAAACGAGCTGTCAGGCTAAATCCAGATG...ATGTAAGTGAAATCTTAACTTCCCCATTTTGGAATGCTGACTCCAGTCATTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR GCA 90 bp | ACTCAGGAAATACAGACACCTAATGACTGGAGTCAGCATTCCAAAATGGGGAAGCAGACTTCTAATATCTaGTTGGTTGGCATGTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: TQEIQTPNDWSQHSKMGKQTSNI*LVGMFF Trigger: AAAGAACATGCCAACCAAGCAGATATTAGAAGTCTG...CTTCCCCATTTTGGAATGCTGACTCCAGTCATTAGGTGTCTGTATTTCCTGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR GCA 90 bp | CCTAATGACTGGAGTCAGCATTCCAAAATGGGGAAGTTAAGATTTCACTTACATGAAGTTGCAGTTGCATaGTACATAACTCAGGCCACA | + |
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Preference number: 4 (lower is better) Translates to: PNDWSQHSKMGKLRFHLHEVAVA*YITQAT Trigger: TGTGGCCTGAGTTATGTAGCATGCAACTGCAACTTC...ATGTAAGTGAAATCTTAACTTCCCCATTTTGGAATGCTGACTCCAGTCATTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR TCA 90 bp | CAGGAAATACAGACACCTAATGACTGGAGTCAGCATTCCAAAATGGGGAAGTTAATCTCTTGCTTTAGCTaGTCTTCAAAGATCTTCATG | + |
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Preference number: 4 (lower is better) Translates to: QEIQTPNDWSQHSKMGKLISCFS*SSKIFM Trigger: CATGAAGATCTTTGAAGATCAGCTAAAGCAAGAGAT...TAACTTCCCCATTTTGGAATGCTGACTCCAGTCATTAGGTGTCTGTATTTCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR CCA 90 bp | CCTAATGACTGGAGTCAGCATTCCAAAATGGGGAAGTTAAGATTTCACTTACATCAGATTCTTCACTCATaGTGCTATGAAGATAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PNDWSQHSKMGKLRFHLHQILHS*CYEDSR Trigger: CCTGCTATCTTCATAGCACCATGAGTGAAGAATCTG...ATGTAAGTGAAATCTTAACTTCCCCATTTTGGAATGCTGACTCCAGTCATTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR TCA 90 bp | CCTAATGACTGGAGTCAGCATTCCAAAATGGGGAAGTTAAGATTTCACTTACATTGCCTTATTCCTCCCTaGTGCTGTGTTAAATTTATC | + |
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Preference number: 4 (lower is better) Translates to: PNDWSQHSKMGKLRFHLHCLIPP*CCVKFI Trigger: GATAAATTTAACACAGCATCAGGGAGGAATAAGGCA...ATGTAAGTGAAATCTTAACTTCCCCATTTTGGAATGCTGACTCCAGTCATTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR TCA 90 bp | AATGACTGGAGTCAGCATTCCAAAATGGGGAAGTTAAGATTTCACTTACATAGGAGTATAGAGTTTATTTaGGCACAAAGCTTGAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: NDWSQHSKMGKLRFHLHRSIEFI*AQSLRV Trigger: TACCCTCAAGCTTTGTGCTCAAATAAACTCTATACT...CCTATGTAAGTGAAATCTTAACTTCCCCATTTTGGAATGCTGACTCCAGTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR GCA 90 bp | AATGACTGGAGTCAGCATTCCAAAATGGGGAAGTTAAGATTTCACTTACATAGGTGTTCCAAGAAAGATTaGTTTACCATTCCATCAGGA | + |
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Preference number: 4 (lower is better) Translates to: NDWSQHSKMGKLRFHLHRCSKKD*FTIPSG Trigger: TCCTGATGGAATGGTAAAGCAATCTTTCTTGGAACA...CCTATGTAAGTGAAATCTTAACTTCCCCATTTTGGAATGCTGACTCCAGTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR TCA 90 bp | AGCAATTTGATCGGTTACTACTTGCTATGTTCCAAGAAAGATTGCTTTACCATTACCCGTACATTCTGGTaGATACATCTTTTAGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: SNLIGYYLLCSKKDCFTITRTFW*IHLLAN Trigger: ATTGGCTAAAAGATGTATTCACCAGAATGTACGGGT...AATGGTAAAGCAATCTTTCTTGGAACATAGCAAGTAGTAACCGATCAAATTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR CAA 90 bp | CCATCAGGAGGGATGATACTTTCAGGGGGTCTTATGTCTGGTGCCACAAGGCCTTGCTTTGGTTCAGGCTaGGAGGCTCCTTCAAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: PSGGMILSGGLMSGATRPCFGSG*EAPSRF Trigger: GAACCTTGAAGGAGCCTCCAAGCCTGAACCAAAGCA...AGGCCTTGTGGCACCAGACATAAGACCCCCTGAAAGTATCATCCCTCCTGATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR CAA 90 bp | AGTTGCAGTTGCATGCTACATAACTCAGGCCACACAGCCACATTCCTCTCAAGGGTGATCTGTAGTGCTTaGGTTCAGGCTTGGAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: SCSCMLHNSGHTATFLSRVICSA*VQAWRL Trigger: GAGCCTCCAAGCCTGAACCAAAGCACTACAGATCAC...CCTTGAGAGGAATGTGGCTGTGTGGCCTGAGTTATGTAGCATGCAACTGCAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR CAA 90 bp | ATTCCATCAGGAGGGATGATACTTTCAGGGGGTCTTATGTCTGGTGCCACAAGGTTTCCCATGATGTTCTaGGAAACGGCCGTAGTGGTA | + |
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Preference number: 5 (lower is better) Translates to: IPSGGMILSGGLMSGATRFPMMF*ETAVVV Trigger: TACCACTACGGCCGTTTCCAAGAACATCATGGGAAA...CCTTGTGGCACCAGACATAAGACCCCCTGAAAGTATCATCCCTCCTGATGGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR CAA 90 bp | CCATCAGGAGGGATGATACTTTCAGGGGGTCTTATGTCTGGTGCCACAAGGCCTTTTGCATATAGCCAATaGAACCAATCTGTCCACAGT | + |
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Preference number: 5 (lower is better) Translates to: PSGGMILSGGLMSGATRPFAYSQ*NQSVHS Trigger: ACTGTGGACAGATTGGTTCAATTGGCTATATGCAAA...AGGCCTTGTGGCACCAGACATAAGACCCCCTGAAAGTATCATCCCTCCTGATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS TCA 90 bp | GCTTTCCATCAGATTCTTCACTCATGGTGCTATGAAGATAGCAGGTaGTCTGTAGTGCTTTGGTTCAGGCTTGGAGGCTCCTTCAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: AFHQILHSWCYEDSR*SVVLWFRLGGSFKV Trigger: AACCTTGAAGGAGCCTCCAAGCCTGAACCAAAGCACTACAGATCACCTGCTATCTTCATAGCACCATGAGTGAAGAATCTGATGGAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS GCA 90 bp | CCCTTTCTGAAAATGTTCCTCAGCCTTTCTGTGGTGGCCTATTTCTaGATACGTTTCAGCCAGGTCAACATAGGCCATCTCAAATGTTCG | + |
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Preference number: 5 (lower is better) Translates to: PFLKMFLSLSVVAYF*IRFSQVNIGHLKCS Trigger: CGAACATTTGAGATGGCCTATGTTGACCTGGCTGAAACGTATGCAGAAATAGGCCACCACAGAAAGGCTGAGGAACATTTTCAGAAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR CAA 90 bp | ACTCAGGAAATACAGACACCTAATGACTGGAGTCAGCATTCCAAAATGGGGAAGACTTCTCCTTTCAATTaGTGGATAAGCCCAAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: TQEIQTPNDWSQHSKMGKTSPFN*WISPRR Trigger: CCTCCTTGGGCTTATCCACAAATTGAAAGGAGAAGT...CTTCCCCATTTTGGAATGCTGACTCCAGTCATTAGGTGTCTGTATTTCCTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS GCA 90 bp | AGTGGTAATGAATCTCTTGCTTTAGCTGATCTTCAAAGATCTTCATaGGTAACCCTTTCTGAAAATGTTCCTCAGCCTTTCTGTGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: SGNESLALADLQRSS*VTLSENVPQPFCGG Trigger: GCCACCACAGAAAGGCTGAGGAACATTTTCAGAAAGGGTTACGCATGAAGATCTTTGAAGATCAGCTAAAGCAAGAGATTCATTACCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR CAA 90 bp | AGCAATTTGATCGGTTACTACTTGCTATGTTCCAAGAAAGATTGCTTTACCATTCACAGTTTCCCTATCTaGCCCTCTAGGCTGCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: SNLIGYYLLCSKKDCFTIHSFPI*PSRLPV Trigger: AACTGGCAGCCTAGAGGGCAAGATAGGGAAACTGTG...AATGGTAAAGCAATCTTTCTTGGAACATAGCAAGTAGTAACCGATCAAATTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS TCA 90 bp | GTTCGCTTTAACATTATAGTCTTTTCAAATTTGCATATAGCCAATTaGACCAATCTGTCCACAGTTTCCCTATCTTGCCCTCTAGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: VRFNIIVFSNLHIAN*TNLSTVSLSCPLGC Trigger: GCAGCCTAGAGGGCAAGATAGGGAAACTGTGGACAGATTGGTTCAATTGGCTATATGCAAATTTGAAAAGACTATAATGTTAAAGCGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS TCA 90 bp | ATAAGCCCAAGGAGGCTGACACTTTCCACAACCCGTACATTCTGGTaGATACATCTTTTAGCCAATTTCTCTAAAGCATTGAGAAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: ISPRRLTLSTTRTFW*IHLLANFSKALRSF Trigger: AAAACTTCTCAATGCTTTAGAGAAATTGGCTAAAAGATGTATTCACCAGAATGTACGGGTTGTGGAAAGTGTCAGCCTCCTTGGGCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS-3UTR CAA 90 bp | AGCAATTTGATCGGTTACTACTTGCTATGTTCCAAGAAAGATTGCTTTACCATTATGTTCCAAGAAAGATaGCTTTACCATTCCATCAGG | + |
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Preference number: 5 (lower is better) Translates to: SNLIGYYLLCSKKDCFTIMFQER*LYHSIR Trigger: CCTGATGGAATGGTAAAGCAATCTTTCTTGGAACAT...AATGGTAAAGCAATCTTTCTTGGAACATAGCAAGTAGTAACCGATCAAATTGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS TCA 72 bp | CAGATTCTTCACTCATGGTGCTATGAAGATAGCAGGTaGTCTGTAGTGCTTTGGTTCAGGCTTGGAGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: QILHSWCYEDSR*SVVLWFRLGGS Trigger: GGAGCCTCCAAGCCTGAACCAAAGCACTACAGATCACCTGCTATCTTCATAGCACCATGAGTGAAGAATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS GCA 72 bp | AAAATGTTCCTCAGCCTTTCTGTGGTGGCCTATTTCTaGATACGTTTCAGCCAGGTCAACATAGGCCATCTC | + |
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Preference number: 6 (lower is better) Translates to: KMFLSLSVVAYF*IRFSQVNIGHL Trigger: GAGATGGCCTATGTTGACCTGGCTGAAACGTATGCAGAAATAGGCCACCACAGAAAGGCTGAGGAACATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS GCA 72 bp | GAATCTCTTGCTTTAGCTGATCTTCAAAGATCTTCATaGGTAACCCTTTCTGAAAATGTTCCTCAGCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: ESLALADLQRSS*VTLSENVPQPF Trigger: GAAAGGCTGAGGAACATTTTCAGAAAGGGTTACGCATGAAGATCTTTGAAGATCAGCTAAAGCAAGAGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS CAA 72 bp | GGTAATTGCTTTATCTTGAGATTTCCCATGATGTTCTaGGAAACGGCCGTAGTGGTAATGAATCTCTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: GNCFILRFPMMF*ETAVVVMNLLL Trigger: AAGCAAGAGATTCATTACCACTACGGCCGTTTCCAAGAACATCATGGGAAATCTCAAGATAAAGCAATTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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| CDS TCA 72 bp | AACATTATAGTCTTTTCAAATTTGCATATAGCCAATTaGACCAATCTGTCCACAGTTTCCCTATCTTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: NIIVFSNLHIAN*TNLSTVSLSCP Trigger: AGGGCAAGATAGGGAAACTGTGGACAGATTGGTTCAATTGGCTATATGCAAATTTGAAAAGACTATAATGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371809.3 |
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