Pregenerated sensors for IFI30 (Homo sapiens)
Ensembl gene IDs: ENSG00000216490Ensembl transcript IDs: ENST00000407280.4, ENST00000597802.2, ENST00000600463.1
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | ACCATTCTTAGTGGAGCAGGATTCTTGATCATGGGGTaGAATTTTGTGTATCTGGGCTTCATGGGATGCATA | + |
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Preference number: 3 (lower is better) Translates to: TILSGAGFLIMG*NFVYLGFMGCI Trigger: TATGCATCCCATGAAGCCCAGATACACAAAATTCCACCCCATGATCAAGAATCCTGCTCCACTAAGAATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| 3UTR-3UTR CAA 90 bp | AGCACCATTCTTAGTGGAGCAGGATTCTTGATCATGGGGTGGAATTTTGTGTATCATAAAATTTTCCAGTaGGTAAGTAGCAGGTGCCGA | + |
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Preference number: 3 (lower is better) Translates to: STILSGAGFLIMGWNFVYHKIFQ*VSSRCR Trigger: TCGGCACCTGCTACTTACCAACTGGAAAATTTTATG...ATACACAAAATTCCACCCCATGATCAAGAATCCTGCTCCACTAAGAATGGTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| 3UTR TCA 72 bp | TTTACTTTAGCACCATTCTTAGTGGAGCAGGATTCTTaGTCATGGGGTGGAATTTTGTGTATCTGGGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: FTLAPFLVEQDS*SWGGILCIWAS Trigger: TGAAGCCCAGATACACAAAATTCCACCCCATGATCAAGAATCCTGCTCCACTAAGAATGGTGCTAAAGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR CCA 90 bp | AGGCAGGCAGCCGGGTTCCCACTCGCCTTCCATGAGCTCTCCGCAGCTCACCGGCCTGCACCGCCGCCGTaGGGACGTCCAGCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RQAAGFPLAFHELSAAHRPAPPP*GRPAAA Trigger: TGCTGCTGCTGGACGTCCCCACGGCGGCGGTGCAGG...CCGGTGAGCTGCGGAGAGCTCATGGAAGGCGAGTGGGAACCCGGCTGCCTGCCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR CCA 90 bp | AGGCAGGCAGCCGGGTTCCCACTCGCCTTCCATGAGCTCTCCGCAGCTCACCGGCTCCATGATAGTGTCTaGCGACAGCCCTGGGGCGTA | + |
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Preference number: 4 (lower is better) Translates to: RQAAGFPLAFHELSAAHRLHDSV*RQPWGV Trigger: TACGCCCCAGGGCTGTCGCCAGACACTATCATGGAG...CCGGTGAGCTGCGGAGAGCTCATGGAAGGCGAGTGGGAACCCGGCTGCCTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR CCA 90 bp | AGGCAGGCAGCCGGGTTCCCACTCGCCTTCCATGAGCTCTCCGCAGCTCACCGGTACTCGTGTGGTGGCTaGAGAGCATCTGTCCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RQAAGFPLAFHELSAAHRYSCGG*RASVRW Trigger: CCAGCGGACAGATGCTCTCCAGCCACCACACGAGTA...CCGGTGAGCTGCGGAGAGCTCATGGAAGGCGAGTGGGAACCCGGCTGCCTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR GCA 90 bp | AGGCAGGCAGCCGGGTTCCCACTCGCCTTCCATGAGCTCTCCGCAGCTCACCGGAAGAAGTCTAACGCTTaGAGAGGGGACGCCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: RQAAGFPLAFHELSAAHRKKSNA*RGDACT Trigger: GGTGCAGGCGTCCCCTCTGCAAGCGTTAGACTTCTT...CCGGTGAGCTGCGGAGAGCTCATGGAAGGCGAGTGGGAACCCGGCTGCCTGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR CCA 90 bp | AGGCAGGCAGCCGGGTTCCCACTCGCCTTCCATGAGCTCTCCGCAGCTCACCGGGACCAACAGCCATGTTaGGAAGAGCTCCCGGATCAG | + |
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Preference number: 4 (lower is better) Translates to: RQAAGFPLAFHELSAAHRDQQPC*EELPDQ Trigger: CTGATCCGGGAGCTCTTCCCAACATGGCTGTTGGTC...CCGGTGAGCTGCGGAGAGCTCATGGAAGGCGAGTGGGAACCCGGCTGCCTGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR GCA 90 bp | AGGCAGGCAGCCGGGTTCCCACTCGCCTTCCATGAGCTCTCCGCAGCTCACCGGCACTCCTCTTCTCCATaGTGGCACTTGAACTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: RQAAGFPLAFHELSAAHRHSSSP*WHLNSH Trigger: GTGGGAGTTCAAGTGCCAGCATGGAGAAGAGGAGTG...CCGGTGAGCTGCGGAGAGCTCATGGAAGGCGAGTGGGAACCCGGCTGCCTGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR TCA 90 bp | AGGCAGGCAGCCGGGTTCCCACTCGCCTTCCATGAGCTCTCCGCAGCTCACCGGAGTAGAGGGTCACATTaGCAAGCGGTGCATTGGACT | + |
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Preference number: 4 (lower is better) Translates to: RQAAGFPLAFHELSAAHRSRGSH*QAVHWT Trigger: AGTCCAATGCACCGCTTGTCAATGTGACCCTCTACT...CCGGTGAGCTGCGGAGAGCTCATGGAAGGCGAGTGGGAACCCGGCTGCCTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR TCA 90 bp | AGGCAGGCAGCCGGGTTCCCACTCGCCTTCCATGAGCTCTCCGCAGCTCACCGGGTGGAGCAGGATTCTTaGTCATGGGGTGGAATTTTG | + |
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Preference number: 4 (lower is better) Translates to: RQAAGFPLAFHELSAAHRVEQDS*SWGGIL Trigger: CAAAATTCCACCCCATGATCAAGAATCCTGCTCCAC...CCGGTGAGCTGCGGAGAGCTCATGGAAGGCGAGTGGGAACCCGGCTGCCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR GCA 90 bp | AGGCAGGCAGCCGGGTTCCCACTCGCCTTCCATGAGCTCTCCGCAGCTCACCGGCCTCAAACTCTTCCATaGAGACAATGGTCAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: RQAAGFPLAFHELSAAHRPQTLP*RQWSGR Trigger: CCTTCCTGACCATTGTCTGCATGGAAGAGTTTGAGG...CCGGTGAGCTGCGGAGAGCTCATGGAAGGCGAGTGGGAACCCGGCTGCCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR CCA 90 bp | AGGCAGGCAGCCGGGTTCCCACTCGCCTTCCATGAGCTCTCCGCAGCTCACCGGCTTGTAGTTAACTGGTaGCCCATTCCCAAAGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: RQAAGFPLAFHELSAAHRLVVNW*PIPKEV Trigger: GACTTCTTTGGGAATGGGCCACCAGTTAACTACAAG...CCGGTGAGCTGCGGAGAGCTCATGGAAGGCGAGTGGGAACCCGGCTGCCTGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR CCA 90 bp | AGGCAGGCAGCCGGGTTCCCACTCGCCTTCCATGAGCTCTCCGCAGCTCACCGGTTCTTGATCATGGGGTaGAATTTTGTGTATCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: RQAAGFPLAFHELSAAHRFLIMG*NFVYLG Trigger: GCCCAGATACACAAAATTCCACCCCATGATCAAGAA...CCGGTGAGCTGCGGAGAGCTCATGGAAGGCGAGTGGGAACCCGGCTGCCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR GCA 90 bp | CATAAAATTTTCCAGTTGGTAAGTAGCAGGTGCCGAGGGTCTGGATCAGAAAAATGCAGAGGGGACGCCTaGACCGCCGCCGTGGGGACG | + |
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Preference number: 4 (lower is better) Translates to: HKIFQLVSSRCRGSGSEKCRGDA*TAAVGT Trigger: CGTCCCCACGGCGGCGGTGCAGGCGTCCCCTCTGCA...TTTTTCTGATCCAGACCCTCGGCACCTGCTACTTACCAACTGGAAAATTTTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR TCA 90 bp | CATAAAATTTTCCAGTTGGTAAGTAGCAGGTGCCGAGGGTCTGGATCAGAAAAAGGGCGTTGGCGTGCATaGGCTGCATGCCGCGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: HKIFQLVSSRCRGSGSEKGRWRA*AACRGP Trigger: GGGACCGCGGCATGCAGCTCATGCACGCCAACGCCC...TTTTTCTGATCCAGACCCTCGGCACCTGCTACTTACCAACTGGAAAATTTTATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR GCA 90 bp | AGCACCATTCTTAGTGGAGCAGGATTCTTGATCATGGGGTGGAATTTTGTGTATCGCTGGGCGTTGGCGTaGATGAGCTGCATGCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: STILSGAGFLIMGWNFVYRWALA*MSCMPR Trigger: CCGCGGCATGCAGCTCATGCACGCCAACGCCCAGCG...ATACACAAAATTCCACCCCATGATCAAGAATCCTGCTCCACTAAGAATGGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR CCA 90 bp | CATAAAATTTTCCAGTTGGTAAGTAGCAGGTGCCGAGGGTCTGGATCAGAAAAAGTCTGGCGACAGCCCTaGGGCGTAGAGCTGCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: HKIFQLVSSRCRGSGSEKVWRQP*GVELQA Trigger: TGCCTGCAGCTCTACGCCCCAGGGCTGTCGCCAGAC...TTTTTCTGATCCAGACCCTCGGCACCTGCTACTTACCAACTGGAAAATTTTATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR TCA 90 bp | CATAAAATTTTCCAGTTGGTAAGTAGCAGGTGCCGAGGGTCTGGATCAGAAAAACCTGAGGGAGCTGGTTaGGGAAGGGCAGACATCCGG | + |
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Preference number: 4 (lower is better) Translates to: HKIFQLVSSRCRGSGSEKPEGAG*GRADIR Trigger: CCGGATGTCTGCCCTTCCTCAACCAGCTCCCTCAGG...TTTTTCTGATCCAGACCCTCGGCACCTGCTACTTACCAACTGGAAAATTTTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR GCA 90 bp | AGCACCATTCTTAGTGGAGCAGGATTCTTGATCATGGGGTGGAATTTTGTGTATTTGGCGTGCATGAGCTaGATGCCGCGGTCCCCCATT | + |
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Preference number: 4 (lower is better) Translates to: STILSGAGFLIMGWNFVYLACMS*MPRSPI Trigger: AATGGGGGACCGCGGCATGCAGCTCATGCACGCCAA...ATACACAAAATTCCACCCCATGATCAAGAATCCTGCTCCACTAAGAATGGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR CCA 90 bp | CATAAAATTTTCCAGTTGGTAAGTAGCAGGTGCCGAGGGTCTGGATCAGAAAAAAGAGCATCTGTCCGCTaGGCGTTGGCGTGCATGAGC | + |
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Preference number: 4 (lower is better) Translates to: HKIFQLVSSRCRGSGSEKRASVR*ALACMS Trigger: GCTCATGCACGCCAACGCCCAGCGGACAGATGCTCT...TTTTTCTGATCCAGACCCTCGGCACCTGCTACTTACCAACTGGAAAATTTTATG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR GCA 90 bp | AGCACCATTCTTAGTGGAGCAGGATTCTTGATCATGGGGTGGAATTTTGTGTATGCCGCGGTCCCCCATTaGACACTCCATGATAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: STILSGAGFLIMGWNFVYAAVPH*TLHDSV Trigger: GACACTATCATGGAGTGTGCAATGGGGGACCGCGGC...ATACACAAAATTCCACCCCATGATCAAGAATCCTGCTCCACTAAGAATGGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR GCA 90 bp | AGCACCATTCTTAGTGGAGCAGGATTCTTGATCATGGGGTGGAATTTTGTGTATGCAGCCACCGCACAGTaGTTCATAGTAGAGGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: STILSGAGFLIMGWNFVYAATAQ*FIVEGH Trigger: GTGACCCTCTACTATGAAGCACTGTGCGGTGGCTGC...ATACACAAAATTCCACCCCATGATCAAGAATCCTGCTCCACTAAGAATGGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR CCA 90 bp | AGCACCATTCTTAGTGGAGCAGGATTCTTGATCATGGGGTGGAATTTTGTGTATCACATACTCGTGTGGTaGCTGGAGAGCATCTGTCCG | + |
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Preference number: 4 (lower is better) Translates to: STILSGAGFLIMGWNFVYHILVW*LESICP Trigger: CGGACAGATGCTCTCCAGCCACCACACGAGTATGTG...ATACACAAAATTCCACCCCATGATCAAGAATCCTGCTCCACTAAGAATGGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR CCA 90 bp | AGCACCATTCTTAGTGGAGCAGGATTCTTGATCATGGGGTGGAATTTTGTGTATGGGCACATACTCGTGTaGTGGCTGGAGAGCATCTGT | + |
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Preference number: 4 (lower is better) Translates to: STILSGAGFLIMGWNFVYGHILV*WLESIC Trigger: ACAGATGCTCTCCAGCCACCACACGAGTATGTGCCC...ATACACAAAATTCCACCCCATGATCAAGAATCCTGCTCCACTAAGAATGGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR CCA 90 bp | CATAAAATTTTCCAGTTGGTAAGTAGCAGGTGCCGAGGGTCTGGATCAGAAAAATCCGGCTTCTTGCCCTaGTACAACTGGCAGACAAGG | + |
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Preference number: 4 (lower is better) Translates to: HKIFQLVSSRCRGSGSEKSGFLP*YNWQTR Trigger: CCTTGTCTGCCAGTTGTACCAGGGCAAGAAGCCGGA...TTTTTCTGATCCAGACCCTCGGCACCTGCTACTTACCAACTGGAAAATTTTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR TCA 90 bp | AGCACCATTCTTAGTGGAGCAGGATTCTTGATCATGGGGTGGAATTTTGTGTATGTAAGGAGCTGGGTCTaGTCTTCCAAGGGTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: STILSGAGFLIMGWNFVYVRSWV*SSKGFP Trigger: TGGGAAACCCTTGGAAGATCAGACCCAGCTCCTTAC...ATACACAAAATTCCACCCCATGATCAAGAATCCTGCTCCACTAAGAATGGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR CCA 90 bp | AGCACCATTCTTAGTGGAGCAGGATTCTTGATCATGGGGTGGAATTTTGTGTATTCCTCTTCTCCATGCTaGCACTTGAACTCCCACCTG | + |
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Preference number: 4 (lower is better) Translates to: STILSGAGFLIMGWNFVYSSSPC*HLNSHL Trigger: CAGGTGGGAGTTCAAGTGCCAGCATGGAGAAGAGGA...ATACACAAAATTCCACCCCATGATCAAGAATCCTGCTCCACTAAGAATGGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR CCA 90 bp | AGCACCATTCTTAGTGGAGCAGGATTCTTGATCATGGGGTGGAATTTTGTGTATTTGCCCTGGTACAACTaGCAGACAAGGGTAAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: STILSGAGFLIMGWNFVYLPWYN*QTRVRS Trigger: GCTCCTTACCCTTGTCTGCCAGTTGTACCAGGGCAA...ATACACAAAATTCCACCCCATGATCAAGAATCCTGCTCCACTAAGAATGGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR GCA 90 bp | AGCACCATTCTTAGTGGAGCAGGATTCTTGATCATGGGGTGGAATTTTGTGTATGACATTTTGTTCCTGTaGGTTTCCGTAGGGCACCAG | + |
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Preference number: 4 (lower is better) Translates to: STILSGAGFLIMGWNFVYDILFL*VSVGHQ Trigger: CTGGTGCCCTACGGAAACGCACAGGAACAAAATGTC...ATACACAAAATTCCACCCCATGATCAAGAATCCTGCTCCACTAAGAATGGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR GCA 90 bp | AGCACCATTCTTAGTGGAGCAGGATTCTTGATCATGGGGTGGAATTTTGTGTATTTGGTAAGTAGCAGGTaGCGAGGGTCTGGATCAGAA | + |
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Preference number: 4 (lower is better) Translates to: STILSGAGFLIMGWNFVYLVSSR*RGSGSE Trigger: TTCTGATCCAGACCCTCGGCACCTGCTACTTACCAA...ATACACAAAATTCCACCCCATGATCAAGAATCCTGCTCCACTAAGAATGGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR CCA 90 bp | CATAAAATTTTCCAGTTGGTAAGTAGCAGGTGCCGAGGGTCTGGATCAGAAAAACTTCCATGCAGACAATaGTCAGGAAGGCTAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: HKIFQLVSSRCRGSGSEKLPCRQ*SGRLAP Trigger: TGGAGCTAGCCTTCCTGACCATTGTCTGCATGGAAG...TTTTTCTGATCCAGACCCTCGGCACCTGCTACTTACCAACTGGAAAATTTTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS-3UTR CCA 90 bp | CATAAAATTTTCCAGTTGGTAAGTAGCAGGTGCCGAGGGTCTGGATCAGAAAAATGTCTTGTAGTTAACTaGTGGCCCATTCCCAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: HKIFQLVSSRCRGSGSEKCLVVN*WPIPKE Trigger: TTCTTTGGGAATGGGCCACCAGTTAACTACAAGACA...TTTTTCTGATCCAGACCCTCGGCACCTGCTACTTACCAACTGGAAAATTTTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS CCA 90 bp | CGCCTGCACCGCCGCCGTGGGGACGTCCAGCAGCAGCAGCAGCGGTaGCAGGAACAGCAGAAGTGGCGACAGGGTCATCGCAGCAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: RLHRRRGDVQQQQQR*QEQQKWRQGHRSRG Trigger: GCCCCTGCTGCGATGACCCTGTCGCCACTTCTGCTGTTCCTGCCACCGCTGCTGCTGCTGCTGGACGTCCCCACGGCGGCGGTGCAGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000597802.2 |
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| CDS GCA 90 bp | GGTGGCCCATTCCCAAAGAAGTCTAACGCTTGCAGAGGGGACGCCTaGACCGCCGCCGTGGGGACGTCCAGCAGCAGCAGCAGCGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: GGPFPKKSNACRGDA*TAAVGTSSSSSSGG Trigger: GCCACCGCTGCTGCTGCTGCTGGACGTCCCCACGGCGGCGGTGCAGGCGTCCCCTCTGCAAGCGTTAGACTTCTTTGGGAATGGGCCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000597802.2 |
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| CDS GCA 90 bp | CCGCTGGGCGTTGGCGTGCATGAGCTGCATGCCGCGGTCCCCCATTaGACACTCCATGATAGTGTCTGGCGACAGCCCTGGGGCGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: PLGVGVHELHAAVPH*TLHDSVWRQPWGVE Trigger: CTCTACGCCCCAGGGCTGTCGCCAGACACTATCATGGAGTGTGCAATGGGGGACCGCGGCATGCAGCTCATGCACGCCAACGCCCAGCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000600463.1 |
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| CDS CCA 90 bp | GGGGACGTCCAGCAGCAGCAGCAGCGGTGGCAGGAACAGCAGAAGTaGCGACAGGGTCATCGCAGCAGGGGCAAAGGTGTGGCGACTGCA | + |
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Preference number: 5 (lower is better) Translates to: GDVQQQQQRWQEQQK*RQGHRSRGKGVATA Trigger: TGCAGTCGCCACACCTTTGCCCCTGCTGCGATGACCCTGTCGCCACTTCTGCTGTTCCTGCCACCGCTGCTGCTGCTGCTGGACGTCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597802.2 |
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| CDS CCA 90 bp | ACCCAGGGCACATACTCGTGTGGTGGCTGGAGAGCATCTGTCCGCTaGGCGTTGGCGTGCATGAGCTGCATGCCGCGGTCCCCCATTGCA | + |
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Preference number: 5 (lower is better) Translates to: TQGTYSCGGWRASVR*ALACMSCMPRSPIA Trigger: TGCAATGGGGGACCGCGGCATGCAGCTCATGCACGCCAACGCCCAGCGGACAGATGCTCTCCAGCCACCACACGAGTATGTGCCCTGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000600463.1 |
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| CDS GCA 90 bp | GGTGGCTGGAGAGCATCTGTCCGCTGGGCGTTGGCGTGCATGAGCTaGATGCCGCGGTCCCCCATTGCACACTCCATGATAGTGTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: GGWRASVRWALACMS*MPRSPIAHSMIVSG Trigger: GCCAGACACTATCATGGAGTGTGCAATGGGGGACCGCGGCATGCAGCTCATGCACGCCAACGCCCAGCGGACAGATGCTCTCCAGCCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000600463.1 |
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| CDS CCA 90 bp | CCAGCTCCTGCCCCAAAAGTACACAGTAGGCGCTCATTGAACCCTTaGGCGGGACTAGGCGGGTGGAGGCAGCTGCGCCTCTCAGATGCG | + |
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Preference number: 5 (lower is better) Translates to: PAPAPKVHSRRSLNP*AGLGGWRQLRLSDA Trigger: CGCATCTGAGAGGCGCAGCTGCCTCCACCCGCCTAGTCCCGCCCAAGGGTTCAATGAGCGCCTACTGTGTACTTTTGGGGCAGGAGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600463.1 |
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| CDS GCA 90 bp | TACTCGTGTGGTGGCTGGAGAGCATCTGTCCGCTGGGCGTTGGCGTaGATGAGCTGCATGCCGCGGTCCCCCATTGCACACTCCATGATA | + |
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Preference number: 5 (lower is better) Translates to: YSCGGWRASVRWALA*MSCMPRSPIAHSMI Trigger: TATCATGGAGTGTGCAATGGGGGACCGCGGCATGCAGCTCATGCACGCCAACGCCCAGCGGACAGATGCTCTCCAGCCACCACACGAGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000600463.1 |
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| CDS CCA 90 bp | GGTTTCCCATTGACGGTGACCCAGGGCACATACTCGTGTGGTGGCTaGAGAGCATCTGTCCGCTGGGCGTTGGCGTGCATGAGCTGCATG | + |
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Preference number: 5 (lower is better) Translates to: GFPLTVTQGTYSCGG*RASVRWALACMSCM Trigger: CATGCAGCTCATGCACGCCAACGCCCAGCGGACAGATGCTCTCCAGCCACCACACGAGTATGTGCCCTGGGTCACCGTCAATGGGAAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS CCA 90 bp | CAAGGGTTTCCCATTGACGGTGACCCAGGGCACATACTCGTGTGGTaGCTGGAGAGCATCTGTCCGCTGGGCGTTGGCGTGCATGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: QGFPIDGDPGHILVW*LESICPLGVGVHEL Trigger: CAGCTCATGCACGCCAACGCCCAGCGGACAGATGCTCTCCAGCCACCACACGAGTATGTGCCCTGGGTCACCGTCAATGGGAAACCCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS CCA 90 bp | CTTACCCCATTGACGGTGACCCAGGGCACATACTCGTGTGGTGGCTaGAGAGCATCTGTCCGCTGGGCGTTGGCGTGCATGAGCTGCATG | + |
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Preference number: 5 (lower is better) Translates to: LTPLTVTQGTYSCGG*RASVRWALACMSCM Trigger: CATGCAGCTCATGCACGCCAACGCCCAGCGGACAGATGCTCTCCAGCCACCACACGAGTATGTGCCCTGGGTCACCGTCAATGGGGTAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600463.1 |
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| CDS CCA 90 bp | GCACCCTGGTTCCAGCCCAGAAAGGGCTGCACATATTCCCAAGTCTaGCCCCCGCCTCCCGCCTCGCAAATCAGTGGCACATCTTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: APWFQPRKGCTYSQV*PPPPASQISGTSFP Trigger: TGGGAAAGATGTGCCACTGATTTGCGAGGCGGGAGGCGGGGGCCAGACTTGGGAATATGTGCAGCCCTTTCTGGGCTGGAACCAGGGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600463.1 |
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| CDS-3UTR CAA 90 bp | AGGCAGGCAGCCGGGTTCCCACTCGCCTTCCATGAGCTCTCCGCAGCTCACCGGCAGGCCTCCACCTTGTaGAATTTGCACTCCTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: RQAAGFPLAFHELSAAHRQASTL*NLHSSS Trigger: AGAAGAGGAGTGCAAATTCAACAAGGTGGAGGCCTG...CCGGTGAGCTGCGGAGAGCTCATGGAAGGCGAGTGGGAACCCGGCTGCCTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS CCA 90 bp | TTCCAAGGGTTTCCCATTGACGGTGACCCAGGGCACATACTCGTGTaGTGGCTGGAGAGCATCTGTCCGCTGGGCGTTGGCGTGCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: FQGFPIDGDPGHILV*WLESICPLGVGVHE Trigger: CTCATGCACGCCAACGCCCAGCGGACAGATGCTCTCCAGCCACCACACGAGTATGTGCCCTGGGTCACCGTCAATGGGAAACCCTTGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407280.4 |
||
| CDS CCA 90 bp | GATTCTTACCCCATTGACGGTGACCCAGGGCACATACTCGTGTGGTaGCTGGAGAGCATCTGTCCGCTGGGCGTTGGCGTGCATGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DSYPIDGDPGHILVW*LESICPLGVGVHEL Trigger: CAGCTCATGCACGCCAACGCCCAGCGGACAGATGCTCTCCAGCCACCACACGAGTATGTGCCCTGGGTCACCGTCAATGGGGTAAGAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600463.1 |
||
| CDS CCA 90 bp | GACAGGGGTCGCATATTCCCAGCAGCTACCCCAACCCATGCACCCTaGTTCCAGCCCAGAAAGGGCTGCACATATTCCCAAGTCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: DRGRIFPAATPTHAP*FQPRKGCTYSQVWP Trigger: GGGCCAGACTTGGGAATATGTGCAGCCCTTTCTGGGCTGGAACCAGGGTGCATGGGTTGGGGTAGCTGCTGGGAATATGCGACCCCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600463.1 |
||
| CDS-3UTR CAA 90 bp | AGGCAGGCAGCCGGGTTCCCACTCGCCTTCCATGAGCTCTCCGCAGCTCACCGGTCCACCTTGTTGAATTaGCACTCCTCTTCTCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: RQAAGFPLAFHELSAAHRSTLLN*HSSSPC Trigger: GCATGGAGAAGAGGAGTGCAAATTCAACAAGGTGGA...CCGGTGAGCTGCGGAGAGCTCATGGAAGGCGAGTGGGAACCCGGCTGCCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407280.4 |
||
| CDS CCA 90 bp | ATGAATGCATCAAGGGTAGCAGCAAGAATGCATGCCGGCGGCCCTTaGCCAGCTGCTGAACTTGTGCCCTGGGCCACAAAAGGAGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: MNASRVAARMHAGGP*PAAELVPWATKGDP Trigger: GGGGTCTCCTTTTGTGGCCCAGGGCACAAGTTCAGCAGCTGGCCAAGGGCCGCCGGCATGCATTCTTGCTGCTACCCTTGATGCATTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600463.1 |
||
| CDS-3UTR CAA 90 bp | AGGCAGGCAGCCGGGTTCCCACTCGCCTTCCATGAGCTCTCCGCAGCTCACCGGAGTGGAGCAGGATTCTaGATCATGGGGTGGAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: RQAAGFPLAFHELSAAHRSGAGF*IMGWNF Trigger: AAAATTCCACCCCATGATCAAGAATCCTGCTCCACT...CCGGTGAGCTGCGGAGAGCTCATGGAAGGCGAGTGGGAACCCGGCTGCCTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000407280.4 |
||
| CDS TCA 90 bp | AGGCTCGGCAGCCACCGCACAGTGCTTCATAGTAGAGGGTCACATTaGCAAGCGGTGCATTGGACTTCTTCAGGGGCCCCCGCAGGTATA | + |
|
Preference number: 5 (lower is better) Translates to: RLGSHRTVLHSRGSH*QAVHWTSSGAPAGI Trigger: TATACCTGCGGGGGCCCCTGAAGAAGTCCAATGCACCGCTTGTCAATGTGACCCTCTACTATGAAGCACTGTGCGGTGGCTGCCGAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000407280.4 ENST00000597802.2 ENST00000600463.1 |
||
| CDS CCA 90 bp | AAAGATTCTTACCCCATTGACGGTGACCCAGGGCACATACTCGTGTaGTGGCTGGAGAGCATCTGTCCGCTGGGCGTTGGCGTGCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: KDSYPIDGDPGHILV*WLESICPLGVGVHE Trigger: CTCATGCACGCCAACGCCCAGCGGACAGATGCTCTCCAGCCACCACACGAGTATGTGCCCTGGGTCACCGTCAATGGGGTAAGAATCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600463.1 |
||
| CDS-3UTR CAA 90 bp | AGGCAGGCAGCCGGGTTCCCACTCGCCTTCCATGAGCTCTCCGCAGCTCACCGGCATAAAATTTTCCAGTaGGTAAGTAGCAGGTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: RQAAGFPLAFHELSAAHRHKIFQ*VSSRCR Trigger: TCGGCACCTGCTACTTACCAACTGGAAAATTTTATG...CCGGTGAGCTGCGGAGAGCTCATGGAAGGCGAGTGGGAACCCGGCTGCCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407280.4 |
||
| CDS GCA 90 bp | AAAGCAAGACAGGGGTCGCATATTCCCAGCAGCTACCCCAACCCATaGACCCTGGTTCCAGCCCAGAAAGGGCTGCACATATTCCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KARQGSHIPSSYPNP*TLVPAQKGLHIFPS Trigger: ACTTGGGAATATGTGCAGCCCTTTCTGGGCTGGAACCAGGGTGCATGGGTTGGGGTAGCTGCTGGGAATATGCGACCCCTGTCTTGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600463.1 |
||
| CDS TCA 90 bp | TGGCCCATGCTCATTTCTTGTCACTTCACCTGGAGACCTTGCCTCTaGGCTGAGCAAGGGATCCACGTGAACCCTTTCCAAGTCCGACTG | + |
|
Preference number: 5 (lower is better) Translates to: WPMLISCHFTWRPCL*AEQGIHVNPFQVRL Trigger: CAGTCGGACTTGGAAAGGGTTCACGTGGATCCCTTGCTCAGCTCAGAGGCAAGGTCTCCAGGTGAAGTGACAAGAAATGAGCATGGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600463.1 |
||
| CDS CCA 90 bp | ACGCAGGCCTCCACCTTGTTGAATTTGCACTCCTCTTCTCCATGCTaGCACTTGAACTCCCACCTGCCACTGACATTTTGTTCCTGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: TQASTLLNLHSSSPC*HLNSHLPLTFCSCA Trigger: CGCACAGGAACAAAATGTCAGTGGCAGGTGGGAGTTCAAGTGCCAGCATGGAGAAGAGGAGTGCAAATTCAACAAGGTGGAGGCCTGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000600463.1 |
||
| CDS TCA 90 bp | CCACTTCTCTCAACCCCACTTGGTAGTCTTGTAGAAAGGGGGCTGTaGTACGCAATTCATCTTGCACGCCTTCCAGAACTTGCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLLSTPLGSLVERGL*YAIHLARLPELARW Trigger: CCACCTGGCAAGTTCTGGAAGGCGTGCAAGATGAATTGCGTATCACAGCCCCCTTTCTACAAGACTACCAAGTGGGGTTGAGAGAAGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600463.1 |
||
| CDS TCA 90 bp | TTCTTGCCCTGGTACAACTGGCAGACAAGGGTAAGGAGCTGGGTCTaGTCTTCCAAGGGTTTCTGCACAAAGCAAGACAGGGGTCGCATA | + |
|
Preference number: 5 (lower is better) Translates to: FLPWYNWQTRVRSWV*SSKGFCTKQDRGRI Trigger: TATGCGACCCCTGTCTTGCTTTGTGCAGAAACCCTTGGAAGATCAGACCCAGCTCCTTACCCTTGTCTGCCAGTTGTACCAGGGCAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600463.1 |
||
| CDS GCA 90 bp | AACACGCAGGCCTCCACCTTGTTGAATTTGCACTCCTCTTCTCCATaGTGGCACTTGAACTCCCACCTGCCACTGACATTTTGTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NTQASTLLNLHSSSP*WHLNSHLPLTFCSC Trigger: ACAGGAACAAAATGTCAGTGGCAGGTGGGAGTTCAAGTGCCAGCATGGAGAAGAGGAGTGCAAATTCAACAAGGTGGAGGCCTGCGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000600463.1 |
||
| CDS CCA 90 bp | GTGGCAGACTTCTCTCCATGTCCTCAAACTCTTCCATGCAGACAATaGTCAGGAAGGCTAGCTCCATGTCAAGTTCATCCAACACGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VADFSPCPQTLPCRQ*SGRLAPCQVHPTRR Trigger: CCTGCGTGTTGGATGAACTTGACATGGAGCTAGCCTTCCTGACCATTGTCTGCATGGAAGAGTTTGAGGACATGGAGAGAAGTCTGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000600463.1 |
||
| CDS-3UTR CAA 90 bp | AGCACCATTCTTAGTGGAGCAGGATTCTTGATCATGGGGTGGAATTTTGTGTATTCTGTCCGCTGGGCGTaGGCGTGCATGAGCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: STILSGAGFLIMGWNFVYSVRWA*ACMSCM Trigger: CATGCAGCTCATGCACGCCAACGCCCAGCGGACAGA...ATACACAAAATTCCACCCCATGATCAAGAATCCTGCTCCACTAAGAATGGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407280.4 |
||
| CDS GCA 90 bp | GCAGGCATAGTGGCAGACTTCTCTCCATGTCCTCAAACTCTTCCATaGAGACAATGGTCAGGAAGGCTAGCTCCATGTCAAGTTCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: AGIVADFSPCPQTLP*RQWSGRLAPCQVHP Trigger: TGGATGAACTTGACATGGAGCTAGCCTTCCTGACCATTGTCTGCATGGAAGAGTTTGAGGACATGGAGAGAAGTCTGCCACTATGCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000600463.1 |
||
| CDS-3UTR CAA 90 bp | AGCACCATTCTTAGTGGAGCAGGATTCTTGATCATGGGGTGGAATTTTGTGTATTCTCCATGCTGGCACTaGAACTCCCACCTGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: STILSGAGFLIMGWNFVYSPCWH*NSHLPL Trigger: CAGTGGCAGGTGGGAGTTCAAGTGCCAGCATGGAGA...ATACACAAAATTCCACCCCATGATCAAGAATCCTGCTCCACTAAGAATGGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407280.4 |
||
| CDS-3UTR CAA 90 bp | CATAAAATTTTCCAGTTGGTAAGTAGCAGGTGCCGAGGGTCTGGATCAGAAAAATCCAAGGGTTTCCCATaGACGGTGACCCAGGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: HKIFQLVSSRCRGSGSEKSKGFP*TVTQGT Trigger: TGTGCCCTGGGTCACCGTCAATGGGAAACCCTTGGA...TTTTTCTGATCCAGACCCTCGGCACCTGCTACTTACCAACTGGAAAATTTTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000407280.4 |
||
| CDS-3UTR CAA 90 bp | AGCACCATTCTTAGTGGAGCAGGATTCTTGATCATGGGGTGGAATTTTGTGTATCAGACATCCGGCTTCTaGCCCTGGTACAACTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: STILSGAGFLIMGWNFVYQTSGF*PWYNWQ Trigger: CTGCCAGTTGTACCAGGGCAAGAAGCCGGATGTCTG...ATACACAAAATTCCACCCCATGATCAAGAATCCTGCTCCACTAAGAATGGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407280.4 |
||
| CDS-3UTR CAA 90 bp | CATAAAATTTTCCAGTTGGTAAGTAGCAGGTGCCGAGGGTCTGGATCAGAAAAAGGCACCAGCGTGACATaGAGGATCTCCATGACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: HKIFQLVSSRCRGSGSEKGTSVT*RISMTN Trigger: GTTGGTCATGGAGATCCTCAATGTCACGCTGGTGCC...TTTTTCTGATCCAGACCCTCGGCACCTGCTACTTACCAACTGGAAAATTTTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000407280.4 |
||
| CDS-3UTR CAA 90 bp | AGCACCATTCTTAGTGGAGCAGGATTCTTGATCATGGGGTGGAATTTTGTGTATCTCACCGGCCATCACTaGAAGCAAACACTCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: STILSGAGFLIMGWNFVYLTGHH*KQTLLR Trigger: CCTCAGGAGTGTTTGCTTCAAGTGATGGCCGGTGAG...ATACACAAAATTCCACCCCATGATCAAGAATCCTGCTCCACTAAGAATGGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407280.4 |
||
| CDS-3UTR CAA 90 bp | CATAAAATTTTCCAGTTGGTAAGTAGCAGGTGCCGAGGGTCTGGATCAGAAAAAACGCAGGCCTCCACCTaGTTGAATTTGCACTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HKIFQLVSSRCRGSGSEKTQAST*LNLHSS Trigger: AGAGGAGTGCAAATTCAACAAGGTGGAGGCCTGCGT...TTTTTCTGATCCAGACCCTCGGCACCTGCTACTTACCAACTGGAAAATTTTATG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000407280.4 |
||
| CDS-3UTR CAA 90 bp | CATAAAATTTTCCAGTTGGTAAGTAGCAGGTGCCGAGGGTCTGGATCAGAAAAACCTGCCACTGACATTTaGTTCCTGTGCGTTTCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: HKIFQLVSSRCRGSGSEKPATDI*FLCVSV Trigger: TACGGAAACGCACAGGAACAAAATGTCAGTGGCAGG...TTTTTCTGATCCAGACCCTCGGCACCTGCTACTTACCAACTGGAAAATTTTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000407280.4 |
||
| CDS-3UTR CAA 90 bp | AGCACCATTCTTAGTGGAGCAGGATTCTTGATCATGGGGTGGAATTTTGTGTATTCATGGGGTGGAATTTaGTGTATCTGGGCTTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: STILSGAGFLIMGWNFVYSWGGI*CIWASW Trigger: CCATGAAGCCCAGATACACAAAATTCCACCCCATGA...ATACACAAAATTCCACCCCATGATCAAGAATCCTGCTCCACTAAGAATGGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000407280.4 |
||
| CDS TCA 72 bp | GTGGCGACTGCAGCGGCTGCCGTGGTCCCGTGGGACTaGCTCAGGCTTGACCACAGCCACGCCGGAAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VATAAAAVVPWD*LRLDHSHAGKQ Trigger: CTGCTTTCCGGCGTGGCTGTGGTCAAGCCTGAGTCAGTCCCACGGGACCACGGCAGCCGCTGCAGTCGCCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597802.2 |
||
| CDS CCA 72 bp | AGTGGCGACAGGGTCATCGCAGCAGGGGCAAAGGTGTaGCGACTGCAGCGGCTGCCGTGGTCCCGTGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: SGDRVIAAGAKV*RLQRLPWSRGT Trigger: AGTCCCACGGGACCACGGCAGCCGCTGCAGTCGCCACACCTTTGCCCCTGCTGCGATGACCCTGTCGCCACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597802.2 |
||
| CDS GCA 72 bp | GGTGGCTGGAGAGCATCTGTCCGCTGGGCGTTGGCGTaGATGAGCTGCATGCCGCGGTCCCCCATTGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: GGWRASVRWALA*MSCMPRSPIAH Trigger: GTGTGCAATGGGGGACCGCGGCATGCAGCTCATGCACGCCAACGCCCAGCGGACAGATGCTCTCCAGCCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000600463.1 |
||
| CDS TCA 72 bp | GCTGGAGAGCATCTGTCCGCTGGGCGTTGGCGTGCATaGGCTGCATGCCGCGGTCCCCCATTGCACACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: AGEHLSAGRWRA*AACRGPPLHTP Trigger: TGGAGTGTGCAATGGGGGACCGCGGCATGCAGCTCATGCACGCCAACGCCCAGCGGACAGATGCTCTCCAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000600463.1 |
||
| CDS GCA 72 bp | TTCCCAAAGAAGTCTAACGCTTGCAGAGGGGACGCCTaGACCGCCGCCGTGGGGACGTCCAGCAGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FPKKSNACRGDA*TAAVGTSSSSS Trigger: GCTGCTGCTGCTGGACGTCCCCACGGCGGCGGTGCAGGCGTCCCCTCTGCAAGCGTTAGACTTCTTTGGGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000597802.2 |
||
| CDS GCA 72 bp | CCAACCCATGCACCCTGGTTCCAGCCCAGAAAGGGCTaGACATATTCCCAAGTCTGGCCCCCGCCTCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PTHAPWFQPRKG*TYSQVWPPPPA Trigger: GGCGGGAGGCGGGGGCCAGACTTGGGAATATGTGCAGCCCTTTCTGGGCTGGAACCAGGGTGCATGGGTTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600463.1 |
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| CDS CAA 72 bp | TCGTGTGGTGGCTGGAGAGCATCTGTCCGCTGGGCGTaGGCGTGCATGAGCTGCATGCCGCGGTCCCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: SCGGWRASVRWA*ACMSCMPRSPI Trigger: AATGGGGGACCGCGGCATGCAGCTCATGCACGCCAACGCCCAGCGGACAGATGCTCTCCAGCCACCACACGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000600463.1 |
||
| CDS CAA 90 bp | GGCACATACTCGTGTGGTGGCTGGAGAGCATCTGTCCGCTGGGCGTaGGCGTGCATGAGCTGCATGCCGCGGTCCCCCATTGCACACTCC | + |
|
Preference number: 6 (lower is better) Translates to: GTYSCGGWRASVRWA*ACMSCMPRSPIAHS Trigger: GGAGTGTGCAATGGGGGACCGCGGCATGCAGCTCATGCACGCCAACGCCCAGCGGACAGATGCTCTCCAGCCACCACACGAGTATGTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000600463.1 |
||
| CDS CCA 72 bp | ACATACTCGTGTGGTGGCTGGAGAGCATCTGTCCGCTaGGCGTTGGCGTGCATGAGCTGCATGCCGCGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TYSCGGWRASVR*ALACMSCMPRS Trigger: GGACCGCGGCATGCAGCTCATGCACGCCAACGCCCAGCGGACAGATGCTCTCCAGCCACCACACGAGTATGT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000600463.1 |
||
| CDS CCA 72 bp | CCCATTGACGGTGACCCAGGGCACATACTCGTGTGGTaGCTGGAGAGCATCTGTCCGCTGGGCGTTGGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: PIDGDPGHILVW*LESICPLGVGV Trigger: CACGCCAACGCCCAGCGGACAGATGCTCTCCAGCCACCACACGAGTATGTGCCCTGGGTCACCGTCAATGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000600463.1 |
||
| CDS CCA 72 bp | GCCCCAAAAGTACACAGTAGGCGCTCATTGAACCCTTaGGCGGGACTAGGCGGGTGGAGGCAGCTGCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: APKVHSRRSLNP*AGLGGWRQLRL Trigger: GAGGCGCAGCTGCCTCCACCCGCCTAGTCCCGCCCAAGGGTTCAATGAGCGCCTACTGTGTACTTTTGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600463.1 |
||
| CDS CAA 72 bp | GAATGCATGCCGGCGGCCCTTGGCCAGCTGCTGAACTaGTGCCCTGGGCCACAAAAGGAGACCCCAGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ECMPAALGQLLN*CPGPQKETPAP Trigger: AGGAGCTGGGGTCTCCTTTTGTGGCCCAGGGCACAAGTTCAGCAGCTGGCCAAGGGCCGCCGGCATGCATTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600463.1 |
||
| CDS TCA 72 bp | AGCAAGAATGCATGCCGGCGGCCCTTGGCCAGCTGCTaGACTTGTGCCCTGGGCCACAAAAGGAGACCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SKNACRRPLASC*TCALGHKRRPQ Trigger: CTGGGGTCTCCTTTTGTGGCCCAGGGCACAAGTTCAGCAGCTGGCCAAGGGCCGCCGGCATGCATTCTTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600463.1 |
||
| CDS GCA 72 bp | TTAACTGGTGGCCCATTCCCAAAGAAGTCTAACGCTTaGAGAGGGGACGCCTGCACCGCCGCCGTGGGGACG | + |
|
Preference number: 6 (lower is better) Translates to: LTGGPFPKKSNA*RGDACTAAVGT Trigger: CGTCCCCACGGCGGCGGTGCAGGCGTCCCCTCTGCAAGCGTTAGACTTCTTTGGGAATGGGCCACCAGTTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000597802.2 |
||
| CDS CCA 72 bp | TTGACGGTGACCCAGGGCACATACTCGTGTGGTGGCTaGAGAGCATCTGTCCGCTGGGCGTTGGCGTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LTVTQGTYSCGG*RASVRWALACM Trigger: CATGCACGCCAACGCCCAGCGGACAGATGCTCTCCAGCCACCACACGAGTATGTGCCCTGGGTCACCGTCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000600463.1 |
||
| CDS CCA 72 bp | TACCCCATTGACGGTGACCCAGGGCACATACTCGTGTaGTGGCTGGAGAGCATCTGTCCGCTGGGCGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: YPIDGDPGHILV*WLESICPLGVG Trigger: GCCAACGCCCAGCGGACAGATGCTCTCCAGCCACCACACGAGTATGTGCCCTGGGTCACCGTCAATGGGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600463.1 |
||
| CDS CAA 72 bp | CCAGCTCCTGCCCCAAAAGTACACAGTAGGCGCTCATaGAACCCTTGGGCGGGACTAGGCGGGTGGAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PAPAPKVHSRRS*NPWAGLGGWRQ Trigger: CTGCCTCCACCCGCCTAGTCCCGCCCAAGGGTTCAATGAGCGCCTACTGTGTACTTTTGGGGCAGGAGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600463.1 |
||
| CDS GCA 72 bp | AGAGCATCTGTCCGCTGGGCGTTGGCGTGCATGAGCTaGATGCCGCGGTCCCCCATTGCACACTCCATGATA | + |
|
Preference number: 6 (lower is better) Translates to: RASVRWALACMS*MPRSPIAHSMI Trigger: TATCATGGAGTGTGCAATGGGGGACCGCGGCATGCAGCTCATGCACGCCAACGCCCAGCGGACAGATGCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000600463.1 |
||
| CDS CCA 72 bp | TTTCCCATTGACGGTGACCCAGGGCACATACTCGTGTaGTGGCTGGAGAGCATCTGTCCGCTGGGCGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FPIDGDPGHILV*WLESICPLGVG Trigger: GCCAACGCCCAGCGGACAGATGCTCTCCAGCCACCACACGAGTATGTGCCCTGGGTCACCGTCAATGGGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407280.4 |
||
| CDS CCA 72 bp | TTCCAGCCCAGAAAGGGCTGCACATATTCCCAAGTCTaGCCCCCGCCTCCCGCCTCGCAAATCAGTGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: FQPRKGCTYSQV*PPPPASQISGT Trigger: TGTGCCACTGATTTGCGAGGCGGGAGGCGGGGGCCAGACTTGGGAATATGTGCAGCCCTTTCTGGGCTGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600463.1 |
||
| CDS GCA 72 bp | CTCCCGGATCAGGAAGGCTCGGCAGCCACCGCACAGTaGTTCATAGTAGAGGGTCACATTGACAAGCGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LPDQEGSAATAQ*FIVEGHIDKRC Trigger: GCACCGCTTGTCAATGTGACCCTCTACTATGAAGCACTGTGCGGTGGCTGCCGAGCCTTCCTGATCCGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000407280.4 ENST00000597802.2 ENST00000600463.1 |
||
| CDS GCA 72 bp | GCTAGGCTGGTGTGCTGCGGCACGATCTCGGCTCACTaGAACACCCGACTCCCTGGTTCAAGCAATTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ARLVCCGTISAH*NTRLPGSSNCP Trigger: AGGACAATTGCTTGAACCAGGGAGTCGGGTGTTGCAGTGAGCCGAGATCGTGCCGCAGCACACCAGCCTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600463.1 |
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| CDS CCA 72 bp | TCAAGGGTAGCAGCAAGAATGCATGCCGGCGGCCCTTaGCCAGCTGCTGAACTTGTGCCCTGGGCCACAAAA | + |
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Preference number: 6 (lower is better) Translates to: SRVAARMHAGGP*PAAELVPWATK Trigger: TTTTGTGGCCCAGGGCACAAGTTCAGCAGCTGGCCAAGGGCCGCCGGCATGCATTCTTGCTGCTACCCTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600463.1 |
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| CDS CAA 72 bp | GCATTGGACTTCTTCAGGGGCCCCCGCAGGTATAGATaGCCTGTCTGTGGATTAGGAAGGCGTGGGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: ALDFFRGPRRYR*PVCGLGRRGRQ Trigger: CTGCCTCCCACGCCTTCCTAATCCACAGACAGGCAATCTATACCTGCGGGGGCCCCTGAAGAAGTCCAATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600463.1 |
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| CDS TCA 72 bp | AGCCACCGCACAGTGCTTCATAGTAGAGGGTCACATTaGCAAGCGGTGCATTGGACTTCTTCAGGGGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: SHRTVLHSRGSH*QAVHWTSSGAP Trigger: GGGGGCCCCTGAAGAAGTCCAATGCACCGCTTGTCAATGTGACCCTCTACTATGAAGCACTGTGCGGTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000407280.4 ENST00000597802.2 ENST00000600463.1 |
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| CDS TCA 72 bp | TGGTACAACTGGCAGACAAGGGTAAGGAGCTGGGTCTaGTCTTCCAAGGGTTTCCCATTGACGGTGACCCAG | + |
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Preference number: 6 (lower is better) Translates to: WYNWQTRVRSWV*SSKGFPLTVTQ Trigger: CTGGGTCACCGTCAATGGGAAACCCTTGGAAGATCAGACCCAGCTCCTTACCCTTGTCTGCCAGTTGTACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407280.4 |
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| CDS CAA 72 bp | AGTGTCAAGCTGAGGGCTAAAAAGATTCTTACCCCATaGACGGTGACCCAGGGCACATACTCGTGTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: SVKLRAKKILTP*TVTQGTYSCGG Trigger: GCCACCACACGAGTATGTGCCCTGGGTCACCGTCAATGGGGTAAGAATCTTTTTAGCCCTCAGCTTGACACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600463.1 |
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| CDS CAA 90 bp | GCCTCCACCTTGTTGAATTTGCACTCCTCTTCTCCATGCTGGCACTaGAACTCCCACCTGCCACTGACATTTTGTTCCTGTGCGTTTCCG | + |
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Preference number: 6 (lower is better) Translates to: ASTLLNLHSSSPCWH*NSHLPLTFCSCAFP Trigger: CGGAAACGCACAGGAACAAAATGTCAGTGGCAGGTGGGAGTTCAAGTGCCAGCATGGAGAAGAGGAGTGCAAATTCAACAAGGTGGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000600463.1 |
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| CDS TCA 72 bp | CTCATTTCTTGTCACTTCACCTGGAGACCTTGCCTCTaGGCTGAGCAAGGGATCCACGTGAACCCTTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LISCHFTWRPCL*AEQGIHVNPFQ Trigger: TTGGAAAGGGTTCACGTGGATCCCTTGCTCAGCTCAGAGGCAAGGTCTCCAGGTGAAGTGACAAGAAATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600463.1 |
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| CDS TCA 72 bp | TGGTACAACTGGCAGACAAGGGTAAGGAGCTGGGTCTaGTCTTCCAAGGGTTTCTGCACAAAGCAAGACAGG | + |
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Preference number: 6 (lower is better) Translates to: WYNWQTRVRSWV*SSKGFCTKQDR Trigger: CCTGTCTTGCTTTGTGCAGAAACCCTTGGAAGATCAGACCCAGCTCCTTACCCTTGTCTGCCAGTTGTACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600463.1 |
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| CDS TCA 72 bp | TCAACCCCACTTGGTAGTCTTGTAGAAAGGGGGCTGTaGTACGCAATTCATCTTGCACGCCTTCCAGAACTT | + |
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Preference number: 6 (lower is better) Translates to: STPLGSLVERGL*YAIHLARLPEL Trigger: AAGTTCTGGAAGGCGTGCAAGATGAATTGCGTATCACAGCCCCCTTTCTACAAGACTACCAAGTGGGGTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600463.1 |
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| CDS CCA 72 bp | TCCACCTTGTTGAATTTGCACTCCTCTTCTCCATGCTaGCACTTGAACTCCCACCTGCCACTGACATTTTGT | + |
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Preference number: 6 (lower is better) Translates to: STLLNLHSSSPC*HLNSHLPLTFC Trigger: ACAAAATGTCAGTGGCAGGTGGGAGTTCAAGTGCCAGCATGGAGAAGAGGAGTGCAAATTCAACAAGGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000600463.1 |
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| CDS CCA 72 bp | TTCTCTCCATGTCCTCAAACTCTTCCATGCAGACAATaGTCAGGAAGGCTAGCTCCATGTCAAGTTCATCCA | + |
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Preference number: 6 (lower is better) Translates to: FSPCPQTLPCRQ*SGRLAPCQVHP Trigger: TGGATGAACTTGACATGGAGCTAGCCTTCCTGACCATTGTCTGCATGGAAGAGTTTGAGGACATGGAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000600463.1 |
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| CDS CAA 72 bp | TTGTTGAATTTGCACTCCTCTTCTCCATGCTGGCACTaGAACTCCCACCTGCCACTGACATTTTGTTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: LLNLHSSSPCWH*NSHLPLTFCSC Trigger: ACAGGAACAAAATGTCAGTGGCAGGTGGGAGTTCAAGTGCCAGCATGGAGAAGAGGAGTGCAAATTCAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000407280.4 ENST00000600463.1 |
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