RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IFI27L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000165948, ENSG00000276880

Ensembl transcript IDs: ENST00000393115.7, ENST00000553350.5, ENST00000553664.1, ENST00000554166.5, ENST00000554544.5, ENST00000554562.1, ENST00000555065.5, ENST00000555341.5, ENST00000555523.6, ENST00000556381.5, ENST00000557066.5, ENST00000557218.5, ENST00000557600.5, ENST00000611681.3, ENST00000625811.1, ENST00000625947.2, ENST00000626435.2, ENST00000626801.1, ENST00000627505.2, ENST00000627570.2, ENST00000627633.2, ENST00000627939.2, ENST00000628436.2, ENST00000629051.2, ENST00000629591.2, ENST00000629798.2

Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp TGTGGTGTTCAGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGAGTCCAGCTGCCCCTaGAGGGAGAGGAGAGGCCTC +
Preference number: 2 (lower is better)
Translates to: CGVQLEGGEPSQAPRAVPESSCP*RERRGL
Trigger: GAGGCCTCTCCTCTCCCTGCAGGGGCAGCTGGACTC...TGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCTGAACACCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
3UTR-3UTR GCA 90 bp CCCAGCCAGGCCCCAAGAGCTGTCCCAGCAAAGCCCCCGATAACTTTAGATGTCGAGTCCAGCTGCCCCTaGAGGGAGAGGAGAGGCCTC +
Preference number: 2 (lower is better)
Translates to: PSQAPRAVPAKPPITLDVESSCP*RERRGL
Trigger: GAGGCCTCTCCTCTCCCTGCAGGGGCAGCTGGACTC...GACATCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTCTTGGGGCCTGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
3UTR-3UTR CCA 90 bp ACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAACTCCCTGCCTCAGTGTaGTGTTCAGCTGGAAGGGGG +
Preference number: 2 (lower is better)
Translates to: TCPLEDCHPEAQESHLHQLPASV*CSAGRG
Trigger: CCCCCTTCCAGCTGAACACCACACTGAGGCAGGGAG...TTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553664.1
ENST00000554562.1
ENST00000625811.1
ENST00000626801.1
3UTR GCA 72 bp CCAGGAAAGTCATCTCCACCAAGAGAGCCAACTCCCTaGCTCAGTGTGGTGTTCAGCTGGAAGGGGGTGAAC +
Preference number: 3 (lower is better)
Translates to: PGKSSPPREPTP*LSVVFSWKGVN
Trigger: GTTCACCCCCTTCCAGCTGAACACCACACTGAGGCAGGGAGTTGGCTCTCTTGGTGGAGATGACTTTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553664.1
ENST00000554562.1
ENST00000556381.5
ENST00000625811.1
ENST00000626801.1
ENST00000629798.2
3UTR-3UTR CAA 90 bp CCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGAGAGCTTGTCCTTTGGAAGATaGTCATCCAGAGGCCCAGGA +
Preference number: 3 (lower is better)
Translates to: PLEDCHPEAQESHLHQESLSFGR*SSRGPG
Trigger: TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA...GCTCTCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
3UTR-3UTR CAA 90 bp GGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCTTGTCCTTTGGAAGATaGTCATCCAGAGGCCCAGGA +
Preference number: 3 (lower is better)
Translates to: GSRRLVLWKIVIQRPRKVLSFGR*SSRGPG
Trigger: TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA...GACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
3UTR-3UTR CAA 90 bp GTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGATTGTCCTTTGGAAGATaGTCATCCAGAGGCCCAGGA +
Preference number: 3 (lower is better)
Translates to: VLGVGDLSFGRLSSRGPGLSFGR*SSRGPG
Trigger: TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA...TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
3UTR-3UTR CAA 90 bp TCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGAGAGTTGTCCTTTGGAAGATaGTCATCCAGAGGCCCAGGA +
Preference number: 3 (lower is better)
Translates to: SFGRLSSRGPGKSSPPRELSFGR*SSRGPG
Trigger: TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA...CTCTCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
3UTR-3UTR CAA 90 bp AGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCTTGTCCTTTGGAAGATaGTCATCCAGAGGCCCAGGA +
Preference number: 3 (lower is better)
Translates to: RRLVLWKIVIQRPRKVISLSFGR*SSRGPG
Trigger: TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA...GGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp GTGGTGTTCAGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGGCCCCTTCGCCTCGGTaGGCCTCCACTCGGATTCTT +
Preference number: 4 (lower is better)
Translates to: VVFSWKGVNPARPQELSQAPSPR*ASTRIL
Trigger: AAGAATCCGAGTGGAGGCTCACCGAGGCGAAGGGGC...CTGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCTGAACACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000553664.1
ENST00000556381.5
ENST00000625811.1
ENST00000629798.2
CDS-3UTR CCA 90 bp AGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGCAAAGCCCCCTCCCTGCCTCAGTGTaGTGTTCAGCTGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: SWKGVNPARPQELSQQSPLPASV*CSAGRG
Trigger: CCCCCTTCCAGCTGAACACCACACTGAGGCAGGGAG...GGGGCTTTGCTGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000553664.1
ENST00000554562.1
ENST00000556381.5
ENST00000625811.1
ENST00000626801.1
ENST00000629798.2
CDS-3UTR CCA 90 bp TGTGGTGTTCAGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGAGGAGAGGCCTCCCTaGTTCAGCCTCGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: CGVQLEGGEPSQAPRAVPEERPP*FSLGAG
Trigger: TCCAGCCCCGAGGCTGAACCAGGGAGGCCTCTCCTC...TGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCTGAACACCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR TCA 90 bp AGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGCAAAGCCCCTACAGCAGCCCTGCCTaGGTCCCATCCACTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SWKGVNPARPQELSQQSPYSSPA*VPSTLL
Trigger: AAGGAGAGTGGATGGGACTCAGGCAGGGCTGCTGTA...GGGGCTTTGCTGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000553664.1
ENST00000554562.1
ENST00000625811.1
ENST00000626801.1
CDS-3UTR CCA 90 bp GTGGTGTTCAGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGCACTCTCCTTTCCCATaGTTGGCCCCTTCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: VVFSWKGVNPARPQELSQHSPFP*LAPSPR
Trigger: CCGAGGCGAAGGGGCCAACCATGGGAAAGGAGAGTG...CTGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCTGAACACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000553664.1
ENST00000554562.1
ENST00000556381.5
ENST00000625811.1
ENST00000626801.1
ENST00000629798.2
CDS-3UTR CCA 90 bp GGTGTTCAGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGCAGTTCAGCCTCGGGGCTaGATCATCTCCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GVQLEGGEPSQAPRAVPAVQPRG*IISWLW
Trigger: CCAGAGCCAGGAGATGATCCAGCCCCGAGGCTGAAC...TGCTGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCTGAACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR GCA 90 bp GGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGCAAAGCCCCCGATAACTTTAGAGTCCAGCTGCCCCTaGAGGGAGAGGAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GEPSQAPRAVPAKPPITLESSCP*RERRGL
Trigger: GAGGCCTCTCCTCTCCCTGCAGGGGCAGCTGGACTC...TAAAGTTATCGGGGGCTTTGCTGGGACAGCTCTTGGGGCCTGGCTGGGTTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR CCA 90 bp TGTGGTGTTCAGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCACACTCTCCTTTCCCATaGTTGGCCCCTTCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: CGVQLEGGEPSQAPRAVPHSPFP*LAPSPR
Trigger: CCGAGGCGAAGGGGCCAACCATGGGAAAGGAGAGTG...TGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCTGAACACCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000553664.1
ENST00000554562.1
ENST00000556381.5
ENST00000625811.1
ENST00000626801.1
ENST00000629798.2
CDS-3UTR CCA 90 bp GGTGTTCAGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGCAACCCGCGTCTCTCAGTaGGATGACTGGAGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GVQLEGGEPSQAPRAVPATRVSQ*DDWRSF
Trigger: GAAGCTCCTCCAGTCATCCCACTGAGAGACGCGGGT...TGCTGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCTGAACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556381.5
ENST00000629798.2
CDS-3UTR CCA 90 bp CCCAGCCAGGCCCCAAGAGCTGTCCCAGCAAAGCCCCCGATAACTTTAGATGTCGAGGAGAGGCCTCCCTaGTTCAGCCTCGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PSQAPRAVPAKPPITLDVEERPP*FSLGAG
Trigger: TCCAGCCCCGAGGCTGAACCAGGGAGGCCTCTCCTC...GACATCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTCTTGGGGCCTGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR CCA 90 bp GAACCCAGCCAGGCCCCAAGAGCTGTCCCAGCAAAGCCCCCGATAACTTTAGATGAGGAGAGGCCTCCCTaGTTCAGCCTCGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: EPSQAPRAVPAKPPITLDEERPP*FSLGAG
Trigger: TCCAGCCCCGAGGCTGAACCAGGGAGGCCTCTCCTC...ATCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTCTTGGGGCCTGGCTGGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR GCA 90 bp GTGTTCAGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGCAATTGTCTCTCTGCCTCTaGTCTGGCCCAAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: VFSWKGVNPARPQELSQQLSLCL*SGPSHC
Trigger: GCAGTGACTTGGGCCAGAGCAGAGGCAGAGAGACAA...TTGCTGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCTGAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556381.5
ENST00000629798.2
CDS-3UTR GCA 90 bp TGTGGTGTTCAGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCATTGTCTCTCTGCCTCTaGTCTGGCCCAAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: CGVQLEGGEPSQAPRAVPLSLCL*SGPSHC
Trigger: GCAGTGACTTGGGCCAGAGCAGAGGCAGAGAGACAA...TGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCTGAACACCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556381.5
ENST00000629798.2
CDS-3UTR GCA 90 bp GTGTTCAGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGCAACATCCCTCATACTTCTaGAGCTCCAGTCCCGGACCA +
Preference number: 4 (lower is better)
Translates to: VFSWKGVNPARPQELSQQHPSYF*SSSPGP
Trigger: TGGTCCGGGACTGGAGCTGCAGAAGTATGAGGGATG...TTGCTGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCTGAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556381.5
ENST00000629798.2
CDS-3UTR GCA 90 bp AGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGCAAAGCCCCCTGCTACAGCAGCCCTaGCTTCAGAAATATCCAGTC +
Preference number: 4 (lower is better)
Translates to: SWKGVNPARPQELSQQSPLLQQP*LQKYPV
Trigger: GACTGGATATTTCTGAAGGCAGGGCTGCTGTAGCAG...GGGGCTTTGCTGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000556381.5
ENST00000629798.2
CDS-3UTR GCA 90 bp GTGGTGTTCAGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGCACTCACCCACTGACTaGAGAATAGCCACCAGACTG +
Preference number: 4 (lower is better)
Translates to: VVFSWKGVNPARPQELSQHSPTD*RIATRL
Trigger: CAGTCTGGTGGCTATTCTGCAGTCAGTGGGTGAGTG...CTGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCTGAACACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR GCA 90 bp AGCCAGGCCCCAAGAGCTGTCCCAGCAAAGCCCCCGATAACTTTAGATGTCACAGAGTCCAGCTGCCCCTaGAGGGAGAGGAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SQAPRAVPAKPPITLDVTESSCP*RERRGL
Trigger: GAGGCCTCTCCTCTCCCTGCAGGGGCAGCTGGACTC...TGTGACATCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTCTTGGGGCCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR CCA 90 bp CCCAGCCAGGCCCCAAGAGCTGTCCCAGCAAAGCCCCCGATAACTTTAGATGTCCACTCTCCTTTCCCATaGTTGGCCCCTTCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: PSQAPRAVPAKPPITLDVHSPFP*LAPSPR
Trigger: CCGAGGCGAAGGGGCCAACCATGGGAAAGGAGAGTG...GACATCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTCTTGGGGCCTGGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR CCA 90 bp AGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGCAAAGCCCCCTCCACTCGGATTCTTaGACTTCCACGTTACTGTGC +
Preference number: 4 (lower is better)
Translates to: SWKGVNPARPQELSQQSPLHSDS*TSTLLC
Trigger: GCACAGTAACGTGGAAGTCCAAGAATCCGAGTGGAG...GGGGCTTTGCTGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000556381.5
ENST00000629798.2
CDS-3UTR CCA 90 bp TGTGGTGTTCAGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGGCTGGATCATCTCCTaGCTCTGGTCATCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: CGVQLEGGEPSQAPRAVPGWIIS*LWSSCP
Trigger: TGGACAGGATGACCAGAGCCAGGAGATGATCCAGCC...TGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCTGAACACCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR CCA 90 bp AGCAAAGCCCCCGATAACTTTAGATGTCACAGAGAGTCCAGCTGCCCCTGCAGGGAGGAGAGGCCTCCCTaGTTCAGCCTCGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SKAPDNFRCHRESSCPCREERPP*FSLGAG
Trigger: TCCAGCCCCGAGGCTGAACCAGGGAGGCCTCTCCTC...CCTGCAGGGGCAGCTGGACTCTCTGTGACATCTAAAGTTATCGGGGGCTTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR GCA 90 bp TTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCCCGCCGGCACTGCTaGGGTCCGCGAGGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: LGVGDLSFGRLSSRGPGKSRRHC*GPRGSQ
Trigger: TTGGCTGCCTCGCGGACCGCAGCAGTGCCGGCGGGA...CTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629591.2
CDS-3UTR GCA 90 bp TTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGACTCTCCCGCCGGCACTaGTGCGGTCCGCGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LSFGRLSSRGPGKSSPPRLSRRH*CGPRGS
Trigger: GCTGCCTCGCGGACCGCAGCAGTGCCGGCGGGAGAG...TCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629591.2
CDS-3UTR CCA 90 bp GGTGTTCAGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGCAATCATCTCCTGGCTCTaGTCATCCTGTCCAGAACAC +
Preference number: 4 (lower is better)
Translates to: GVQLEGGEPSQAPRAVPAIISWL*SSCPEH
Trigger: GTGTTCTGGACAGGATGACCAGAGCCAGGAGATGAT...TGCTGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCTGAACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR TCA 90 bp GCAAAGCCCCCGATAACTTTAGATGTCACAGAGAGTCCAGCTGCCCCTGCAGGGTTACTGTGCGGGAGCTaGCAAAGTCTCTCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: AKPPITLDVTESPAAPAGLLCGS*QSLSPE
Trigger: CTCCGGCGAGAGACTTTGTCAGCTCCCGCACAGTAA...CCCTGCAGGGGCAGCTGGACTCTCTGTGACATCTAAAGTTATCGGGGGCTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556381.5
ENST00000629798.2
CDS-3UTR TCA 90 bp ACCCAGCCAGGCCCCAAGAGCTGTCCCAGCAAAGCCCCCGATAACTTTAGATGTTACAGCAGCCCTGCCTaGGTCCCATCCACTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TQPGPKSCPSKAPDNFRCYSSPA*VPSTLL
Trigger: AAGGAGAGTGGATGGGACTCAGGCAGGGCTGCTGTA...ACATCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTCTTGGGGCCTGGCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554562.1
ENST00000626801.1
CDS-3UTR GCA 90 bp CCAGCAAAGCCCCCGATAACTTTAGATGTCACAGAGAGTCCAGCTGCCCCTGCATCCTCCGACCACAGCTaGTACAGCAGCCCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: PAKPPITLDVTESPAAPASSDHS*YSSPAF
Trigger: GAAGGCAGGGCTGCTGTAGCAGCTGTGGTCGGAGGA...TGCAGGGGCAGCTGGACTCTCTGTGACATCTAAAGTTATCGGGGGCTTTGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556381.5
ENST00000629798.2
CDS-3UTR GCA 90 bp AGCAAAGCCCCCGATAACTTTAGATGTCACAGAGAGTCCAGCTGCCCCTGCAGGTCCTCCGACCACAGCTaGTACAGCAGCCCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: SKAPDNFRCHRESSCPCRSSDHS*YSSPAF
Trigger: GAAGGCAGGGCTGCTGTAGCAGCTGTGGTCGGAGGA...CCTGCAGGGGCAGCTGGACTCTCTGTGACATCTAAAGTTATCGGGGGCTTTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556381.5
ENST00000629798.2
CDS-3UTR CCA 90 bp CCAGCAAAGCCCCCGATAACTTTAGATGTCACAGAGAGTCCAGCTGCCCCTGCACACTCTCCTTTCCCATaGTTGGCCCCTTCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: PAKPPITLDVTESPAAPAHSPFP*LAPSPR
Trigger: CCGAGGCGAAGGGGCCAACCATGGGAAAGGAGAGTG...TGCAGGGGCAGCTGGACTCTCTGTGACATCTAAAGTTATCGGGGGCTTTGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR CCA 90 bp TGTCCCAGCAAAGCCCCCGATAACTTTAGATGTCACAGAGAGTCCAGCTGCCCCCTCCCTGCCTCAGTGTaGTGTTCAGCTGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: CPSKAPDNFRCHRESSCPLPASV*CSAGRG
Trigger: CCCCCTTCCAGCTGAACACCACACTGAGGCAGGGAG...GGGGCAGCTGGACTCTCTGTGACATCTAAAGTTATCGGGGGCTTTGCTGGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR CCA 90 bp GTGTTCAGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGCAACTCCACTCGGATTCTTaGACTTCCACGTTACTGTGC +
Preference number: 4 (lower is better)
Translates to: VFSWKGVNPARPQELSQQLHSDS*TSTLLC
Trigger: GCACAGTAACGTGGAAGTCCAAGAATCCGAGTGGAG...TTGCTGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCTGAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556381.5
ENST00000629798.2
CDS-3UTR CCA 90 bp CAGGCCCCAAGAGCTGTCCCAGCAAAGCCCCCGATAACTTTAGATGTCACAGAGGTTCAGCCTCGGGGCTaGATCATCTCCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QAPRAVPAKPPITLDVTEVQPRG*IISWLW
Trigger: CCAGAGCCAGGAGATGATCCAGCCCCGAGGCTGAAC...CTCTGTGACATCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTCTTGGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR TCA 90 bp GGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCGCCCCTTCGCCTCGGTaGGCCTCCACTCGGATTCTT +
Preference number: 4 (lower is better)
Translates to: GSRRLVLWKIVIQRPRKVAPSPR*ASTRIL
Trigger: AAGAATCCGAGTGGAGGCTCACCGAGGCGAAGGGGC...GACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp AGAGCTGTCCCAGCAAAGCCCCCGATAACTTTAGATGTCACAGAGAGTCCAGCTGCCCCTTCGCCTCGGTaGGCCTCCACTCGGATTCTT +
Preference number: 4 (lower is better)
Translates to: RAVPAKPPITLDVTESPAAPSPR*ASTRIL
Trigger: AAGAATCCGAGTGGAGGCTCACCGAGGCGAAGGGGC...AGCTGGACTCTCTGTGACATCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556381.5
ENST00000629798.2
CDS-3UTR TCA 90 bp GGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGCAAAGCCCCCGATAACTTTAAGAACACTCACCCACTaGCTGCAGAATAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: GEPSQAPRAVPAKPPITLRTLTH*LQNSHQ
Trigger: CTGGTGGCTATTCTGCAGTCAGTGGGTGAGTGTTCT...TAAAGTTATCGGGGGCTTTGCTGGGACAGCTCTTGGGGCCTGGCTGGGTTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR GCA 90 bp GACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAGAGTCCAGCTGCCCCTaGAGGGAGAGGAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: DLSFGRLSSRGPGKSSPPESSCP*RERRGL
Trigger: GAGGCCTCTCCTCTCCCTGCAGGGGCAGCTGGACTC...TGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554562.1
ENST00000626801.1
CDS-3UTR GCA 90 bp GGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCAGAGTCCAGCTGCCCCTaGAGGGAGAGGAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GDLSFGRLSSRGPGKSSPESSCP*RERRGL
Trigger: GAGGCCTCTCCTCTCCCTGCAGGGGCAGCTGGACTC...TGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554562.1
ENST00000626801.1
CDS-3UTR GCA 90 bp GTGGTGTTCAGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGTGGACTTCCACCTTCTaGATCTCGCATAGTAACGTA +
Preference number: 4 (lower is better)
Translates to: VVFSWKGVNPARPQELSQWTSTF*ISHSNV
Trigger: TACGTTACTATGCGAGATGCAGAAGGTGGAAGTCCA...CTGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCTGAACACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553664.1
ENST00000625811.1
CDS-3UTR CCA 90 bp CAGGCCCCAAGAGCTGTCCCAGCAAAGCCCCCGATAACTTTAGATGTCACAGAGACCCGCGTCTCTCAGTaGGATGACTGGAGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: QAPRAVPAKPPITLDVTETRVSQ*DDWRSF
Trigger: GAAGCTCCTCCAGTCATCCCACTGAGAGACGCGGGT...CTCTGTGACATCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTCTTGGGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556381.5
ENST00000629798.2
CDS-3UTR TCA 90 bp AGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCGCCCCTTCGCCTCGGTaGGCCTCCACTCGGATTCTT +
Preference number: 4 (lower is better)
Translates to: RLVLWKIVIQRPRKVISTAPSPR*ASTRIL
Trigger: AAGAATCCGAGTGGAGGCTCACCGAGGCGAAGGGGC...GGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp GTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAGCCCCTTCGCCTCGGTaGGCCTCCACTCGGATTCTT +
Preference number: 4 (lower is better)
Translates to: VLGVGDLSFGRLSSRGPGAPSPR*ASTRIL
Trigger: AAGAATCCGAGTGGAGGCTCACCGAGGCGAAGGGGC...TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp CTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGGCCCCTTCGCCTCGGTaGGCCTCCACTCGGATTCTT +
Preference number: 4 (lower is better)
Translates to: LVLWKIVIQRPRKVISTKAPSPR*ASTRIL
Trigger: AAGAATCCGAGTGGAGGCTCACCGAGGCGAAGGGGC...CTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp TCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGAGAGGCCCCTTCGCCTCGGTaGGCCTCCACTCGGATTCTT +
Preference number: 4 (lower is better)
Translates to: SFGRLSSRGPGKSSPPREAPSPR*ASTRIL
Trigger: AAGAATCCGAGTGGAGGCTCACCGAGGCGAAGGGGC...CTCTCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp GGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCAGCCCCTTCGCCTCGGTaGGCCTCCACTCGGATTCTT +
Preference number: 4 (lower is better)
Translates to: GVGDLSFGRLSSRGPGKSAPSPR*ASTRIL
Trigger: AAGAATCCGAGTGGAGGCTCACCGAGGCGAAGGGGC...TGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp GACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAGCCCCTTCGCCTCGGTaGGCCTCCACTCGGATTCTT +
Preference number: 4 (lower is better)
Translates to: DLSFGRLSSRGPGKSSPPAPSPR*ASTRIL
Trigger: AAGAATCCGAGTGGAGGCTCACCGAGGCGAAGGGGC...TGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp GGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCTCCAGCTGCCCCCACTaGCTGCAGAATAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: GSRRLVLWKIVIQRPRKVSSCPH*LQNSHQ
Trigger: CTGGTGGCTATTCTGCAGTCAGTGGGGGCAGCTGGA...GACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000555523.6
ENST00000611681.3
ENST00000625811.1
ENST00000629591.2
CDS-3UTR TCA 90 bp GCAAAGCCCCCGATAACTTTAGATGTCACAGAGAGTCCAGCTGCCCCTGCAGGGAGAACACTCACCCACTaGCTGCAGAATAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: AKPPITLDVTESPAAPAGRTLTH*LQNSHQ
Trigger: CTGGTGGCTATTCTGCAGTCAGTGGGTGAGTGTTCT...CCCTGCAGGGGCAGCTGGACTCTCTGTGACATCTAAAGTTATCGGGGGCTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR TCA 90 bp GAACCCAGCCAGGCCCCAAGAGCTGTCCCAGCAAAGCCCCCGATAACTTTAGATAGAACACTCACCCACTaGCTGCAGAATAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: EPSQAPRAVPAKPPITLDRTLTH*LQNSHQ
Trigger: CTGGTGGCTATTCTGCAGTCAGTGGGTGAGTGTTCT...ATCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTCTTGGGGCCTGGCTGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR GCA 90 bp GCAAAGCCCCCGATAACTTTAGATGTCACAGAGAGTCCAGCTGCCCCTGCAGGGCCTAACTTGTCTCTCTaGCTCTGCTCTGGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: AKPPITLDVTESPAAPAGPNLSL*LCSGPS
Trigger: ACTTGGGCCAGAGCAGAGGCAGAGAGACAAGTTAGG...CCCTGCAGGGGCAGCTGGACTCTCTGTGACATCTAAAGTTATCGGGGGCTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556381.5
ENST00000629798.2
CDS-3UTR GCA 90 bp TGTCCCAGCAAAGCCCCCGATAACTTTAGATGTCACAGAGAGTCCAGCTGCCCCCATCCCTCATACTTCTaGAGCTCCAGTCCCGGACCA +
Preference number: 4 (lower is better)
Translates to: CPSKAPDNFRCHRESSCPHPSYF*SSSPGP
Trigger: TGGTCCGGGACTGGAGCTGCAGAAGTATGAGGGATG...GGGGCAGCTGGACTCTCTGTGACATCTAAAGTTATCGGGGGCTTTGCTGGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556381.5
ENST00000629798.2
CDS-3UTR CCA 90 bp AGAGCTGTCCCAGCAAAGCCCCCGATAACTTTAGATGTCACAGAGAGTCCAGCTCACTCTCCTTTCCCATaGTTGGCCCCTTCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: RAVPAKPPITLDVTESPAHSPFP*LAPSPR
Trigger: CCGAGGCGAAGGGGCCAACCATGGGAAAGGAGAGTG...AGCTGGACTCTCTGTGACATCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR CCA 90 bp GGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCCACTCTCCTTTCCCATaGTTGGCCCCTTCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GSRRLVLWKIVIQRPRKVHSPFP*LAPSPR
Trigger: CCGAGGCGAAGGGGCCAACCATGGGAAAGGAGAGTG...GACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp AGAGCTGTCCCAGCAAAGCCCCCGATAACTTTAGATGTCACAGAGAGTCCAGCTCTCCCTGCCTCAGTGTaGTGTTCAGCTGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: RAVPAKPPITLDVTESPALPASV*CSAGRG
Trigger: CCCCCTTCCAGCTGAACACCACACTGAGGCAGGGAG...AGCTGGACTCTCTGTGACATCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR CCA 90 bp CCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGAGAGCCTCCCTGCCTCAGTGTaGTGTTCAGCTGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: PLEDCHPEAQESHLHQESLPASV*CSAGRG
Trigger: CCCCCTTCCAGCTGAACACCACACTGAGGCAGGGAG...GCTCTCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp GGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCCTCCCTGCCTCAGTGTaGTGTTCAGCTGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: GSRRLVLWKIVIQRPRKVLPASV*CSAGRG
Trigger: CCCCCTTCCAGCTGAACACCACACTGAGGCAGGGAG...GACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp CCAGCAAAGCCCCCGATAACTTTAGATGTCACAGAGAGTCCAGCTGCCCCTGCATCTCTGCCTCTGCTCTaGCCCAAGTCACTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: PAKPPITLDVTESPAAPASLPLL*PKSLLN
Trigger: GTTCAGCAGTGACTTGGGCCAGAGCAGAGGCAGAGA...TGCAGGGGCAGCTGGACTCTCTGTGACATCTAAAGTTATCGGGGGCTTTGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556381.5
ENST00000629798.2
CDS-3UTR CCA 90 bp CCCAGCCAGGCCCCAAGAGCTGTCCCAGCAAAGCCCCCGATAACTTTAGATGTCATCATCTCCTGGCTCTaGTCATCCTGTCCAGAACAC +
Preference number: 4 (lower is better)
Translates to: PSQAPRAVPAKPPITLDVIISWL*SSCPEH
Trigger: GTGTTCTGGACAGGATGACCAGAGCCAGGAGATGAT...GACATCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTCTTGGGGCCTGGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR CCA 90 bp CCAGCAAAGCCCCCGATAACTTTAGATGTCACAGAGAGTCCAGCTGCCCCTGCAGGCTGGATCATCTCCTaGCTCTGGTCATCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PAKPPITLDVTESPAAPAGWIIS*LWSSCP
Trigger: TGGACAGGATGACCAGAGCCAGGAGATGATCCAGCC...TGCAGGGGCAGCTGGACTCTCTGTGACATCTAAAGTTATCGGGGGCTTTGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR CCA 90 bp CAGGCCCCAAGAGCTGTCCCAGCAAAGCCCCCGATAACTTTAGATGTCACAGAGGGCTGGATCATCTCCTaGCTCTGGTCATCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: QAPRAVPAKPPITLDVTEGWIIS*LWSSCP
Trigger: TGGACAGGATGACCAGAGCCAGGAGATGATCCAGCC...CTCTGTGACATCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTCTTGGGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR TCA 90 bp GGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCTTACTGTGCGGGAGCTaGCAAAGTCTCTCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: GSRRLVLWKIVIQRPRKVLLCGS*QSLSPE
Trigger: CTCCGGCGAGAGACTTTGTCAGCTCCCGCACAGTAA...GACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp CCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGAGAGCTTACTGTGCGGGAGCTaGCAAAGTCTCTCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: PLEDCHPEAQESHLHQESLLCGS*QSLSPE
Trigger: CTCCGGCGAGAGACTTTGTCAGCTCCCGCACAGTAA...GCTCTCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp TTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGCCCCTTCGCCTCGGTaGGCCTCCACTCGGATTCTT +
Preference number: 4 (lower is better)
Translates to: FGSRRLVLWKIVIQRPRKAPSPR*ASTRIL
Trigger: AAGAATCCGAGTGGAGGCTCACCGAGGCGAAGGGGC...TTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGAGCCCCTTCGCCTCGGTaGGCCTCCACTCGGATTCTT +
Preference number: 4 (lower is better)
Translates to: LSFGRLSSRGPGKSSPPRAPSPR*ASTRIL
Trigger: AAGAATCCGAGTGGAGGCTCACCGAGGCGAAGGGGC...TCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp GGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCTACAGCAGCCCTGCCTaGGTCCCATCCACTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GSRRLVLWKIVIQRPRKVYSSPA*VPSTLL
Trigger: AAGGAGAGTGGATGGGACTCAGGCAGGGCTGCTGTA...GACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp AGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCTCCAGCTGCCCCCACTaGCTGCAGAATAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: RRLVLWKIVIQRPRKVISSSCPH*LQNSHQ
Trigger: CTGGTGGCTATTCTGCAGTCAGTGGGGGCAGCTGGA...GGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000555523.6
ENST00000611681.3
ENST00000625811.1
ENST00000629591.2
CDS-3UTR TCA 90 bp TGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGAGTCCAGCTGCCCCCACTaGCTGCAGAATAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: CPLEDCHPEAQESHLHQESSCPH*LQNSHQ
Trigger: CTGGTGGCTATTCTGCAGTCAGTGGGGGCAGCTGGA...CTCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000555523.6
ENST00000611681.3
ENST00000625811.1
ENST00000629591.2
CDS-3UTR TCA 90 bp GTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGATCCAGCTGCCCCCACTaGCTGCAGAATAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: VLGVGDLSFGRLSSRGPGSSCPH*LQNSHQ
Trigger: CTGGTGGCTATTCTGCAGTCAGTGGGGGCAGCTGGA...TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000555523.6
ENST00000611681.3
ENST00000625811.1
ENST00000629591.2
CDS-3UTR TCA 90 bp CTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGTCCAGCTGCCCCCACTaGCTGCAGAATAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: LVLWKIVIQRPRKVISTKSSCPH*LQNSHQ
Trigger: CTGGTGGCTATTCTGCAGTCAGTGGGGGCAGCTGGA...CTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000555523.6
ENST00000611681.3
ENST00000625811.1
ENST00000629591.2
CDS-3UTR TCA 90 bp CCAGCAAAGCCCCCGATAACTTTAGATGTCACAGAGAGTCCAGCTGCCCCTGCAAGAACACTCACCCACTaGCTGCAGAATAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: PAKPPITLDVTESPAAPARTLTH*LQNSHQ
Trigger: CTGGTGGCTATTCTGCAGTCAGTGGGTGAGTGTTCT...TGCAGGGGCAGCTGGACTCTCTGTGACATCTAAAGTTATCGGGGGCTTTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR TCA 90 bp GGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCAGAGTCCAGCTGCCCCTaGGTCCCATCCACTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GVGDLSFGRLSSRGPGKSESSCP*VPSTLL
Trigger: AAGGAGAGTGGATGGGACTCAGGGGCAGCTGGACTC...TGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554544.5
ENST00000627633.2
CDS-3UTR TCA 90 bp GTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAGAGTCCAGCTGCCCCTaGGTCCCATCCACTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VLGVGDLSFGRLSSRGPGESSCP*VPSTLL
Trigger: AAGGAGAGTGGATGGGACTCAGGGGCAGCTGGACTC...TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554544.5
ENST00000627633.2
CDS-3UTR GCA 90 bp CCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGAGAGCCTGCTACAGCAGCCCTaGCTGAGTCCCATCCACTCT +
Preference number: 4 (lower is better)
Translates to: PLEDCHPEAQESHLHQESLLQQP*LSPIHS
Trigger: AGAGTGGATGGGACTCAGGCAGGGCTGCTGTAGCAG...GCTCTCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR GCA 90 bp CCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGAGAGCGCTGCCCCCACTGACTaGAGAATAGCCACCAGACTG +
Preference number: 4 (lower is better)
Translates to: PLEDCHPEAQESHLHQESAAPTD*RIATRL
Trigger: CAGTCTGGTGGCTATTCTGCAGTCAGTGGGGGCAGC...GCTCTCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000555523.6
ENST00000611681.3
ENST00000625811.1
ENST00000629591.2
CDS-3UTR GCA 90 bp AGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCAGCTGTAAGAGGAGGTaGCAGCGCCCCAAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RRLVLWKIVIQRPRKVISSCKRR*QRPKPA
Trigger: AGCTGGCTTGGGGCGCTGGCACCTCCTCTTACAGCT...GGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555523.6
ENST00000629591.2
CDS-3UTR GCA 90 bp GGCCCCAAGAGCTGTCCCAGCAAAGCCCCCGATAACTTTAGATGTCACAGAGAGCACTCACCCACTGACTaGAGAATAGCCACCAGACTG +
Preference number: 4 (lower is better)
Translates to: GPKSCPSKAPDNFRCHREHSPTD*RIATRL
Trigger: CAGTCTGGTGGCTATTCTGCAGTCAGTGGGTGAGTG...CTCTCTGTGACATCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTCTTGGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR CCA 90 bp GTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGACTCCTTTCCCATGGTTaGCCCCTTCGCCTCGGTGAG +
Preference number: 4 (lower is better)
Translates to: VLGVGDLSFGRLSSRGPGLLSHG*PLRLGE
Trigger: CTCACCGAGGCGAAGGGGCCAACCATGGGAAAGGAG...TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp GACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCACACTCTCCTTTCCCATaGTTGGCCCCTTCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: DLSFGRLSSRGPGKSSPPHSPFP*LAPSPR
Trigger: CCGAGGCGAAGGGGCCAACCATGGGAAAGGAGAGTG...TGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp AGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGCACTCTCCTTTCCCATaGTTGGCCCCTTCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: SFGSRRLVLWKIVIQRPRHSPFP*LAPSPR
Trigger: CCGAGGCGAAGGGGCCAACCATGGGAAAGGAGAGTG...CCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp TGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGAGCACTCTCCTTTCCCATaGTTGGCCCCTTCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: CPLEDCHPEAQESHLHQEHSPFP*LAPSPR
Trigger: CCGAGGCGAAGGGGCCAACCATGGGAAAGGAGAGTG...CTCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp GGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACACTCTCCTTTCCCATaGTTGGCCCCTTCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GDLSFGRLSSRGPGKSSPHSPFP*LAPSPR
Trigger: CCGAGGCGAAGGGGCCAACCATGGGAAAGGAGAGTG...TGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp TCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGAGAGCACTCTCCTTTCCCATaGTTGGCCCCTTCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: SFGRLSSRGPGKSSPPREHSPFP*LAPSPR
Trigger: CCGAGGCGAAGGGGCCAACCATGGGAAAGGAGAGTG...CTCTCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp GGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCACTCCCTGCCTCAGTGTaGTGTTCAGCTGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: GVGDLSFGRLSSRGPGKSLPASV*CSAGRG
Trigger: CCCCCTTCCAGCTGAACACCACACTGAGGCAGGGAG...TGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp TTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGCTCCCTGCCTCAGTGTaGTGTTCAGCTGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: LGVGDLSFGRLSSRGPGKLPASV*CSAGRG
Trigger: CCCCCTTCCAGCTGAACACCACACTGAGGCAGGGAG...CTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp AGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGCTCCCTGCCTCAGTGTaGTGTTCAGCTGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: SFGSRRLVLWKIVIQRPRLPASV*CSAGRG
Trigger: CCCCCTTCCAGCTGAACACCACACTGAGGCAGGGAG...CCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp AGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCCTCCCTGCCTCAGTGTaGTGTTCAGCTGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: RLVLWKIVIQRPRKVISTLPASV*CSAGRG
Trigger: CCCCCTTCCAGCTGAACACCACACTGAGGCAGGGAG...GGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp GACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCATTACTGTGCGGGAGCTaGCAAAGTCTCTCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: DLSFGRLSSRGPGKSSPPLLCGS*QSLSPE
Trigger: CTCCGGCGAGAGACTTTGTCAGCTCCCGCACAGTAA...TGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp AGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCTTACTGTGCGGGAGCTaGCAAAGTCTCTCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: RLVLWKIVIQRPRKVISTLLCGS*QSLSPE
Trigger: CTCCGGCGAGAGACTTTGTCAGCTCCCGCACAGTAA...GGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp TCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGAGAGTACAGCAGCCCTGCCTaGGTCCCATCCACTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SFGRLSSRGPGKSSPPREYSSPA*VPSTLL
Trigger: AAGGAGAGTGGATGGGACTCAGGCAGGGCTGCTGTA...CTCTCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp TTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTACAGCAGCCCTGCCTaGGTCCCATCCACTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LGVGDLSFGRLSSRGPGKYSSPA*VPSTLL
Trigger: AAGGAGAGTGGATGGGACTCAGGCAGGGCTGCTGTA...CTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp AGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCTACAGCAGCCCTGCCTaGGTCCCATCCACTCTCCTT +
Preference number: 4 (lower is better)
Translates to: RRLVLWKIVIQRPRKVISYSSPA*VPSTLL
Trigger: AAGGAGAGTGGATGGGACTCAGGCAGGGCTGCTGTA...GGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp AGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCAGCTGCCCCCACTaGCTGCAGAATAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: SRRLVLWKIVIQRPRKVISSCPH*LQNSHQ
Trigger: CTGGTGGCTATTCTGCAGTCAGTGGGGGCAGCTGGA...GATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000555523.6
ENST00000611681.3
ENST00000625811.1
ENST00000629591.2
CDS-3UTR GCA 90 bp AGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGCTGCTACAGCAGCCCTaGCTGAGTCCCATCCACTCT +
Preference number: 4 (lower is better)
Translates to: SFGSRRLVLWKIVIQRPRLLQQP*LSPIHS
Trigger: AGAGTGGATGGGACTCAGGCAGGGCTGCTGTAGCAG...CCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR GCA 90 bp GGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCACTGCTACAGCAGCCCTaGCTGAGTCCCATCCACTCT +
Preference number: 4 (lower is better)
Translates to: GVGDLSFGRLSSRGPGKSLLQQP*LSPIHS
Trigger: AGAGTGGATGGGACTCAGGCAGGGCTGCTGTAGCAG...TGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR GCA 90 bp GACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAGCTGCCCCCACTGACTaGAGAATAGCCACCAGACTG +
Preference number: 4 (lower is better)
Translates to: DLSFGRLSSRGPGKSSPPAAPTD*RIATRL
Trigger: CAGTCTGGTGGCTATTCTGCAGTCAGTGGGGGCAGC...TGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000555523.6
ENST00000611681.3
ENST00000625811.1
ENST00000629591.2
CDS-3UTR GCA 90 bp GTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAGCTGCCCCCACTGACTaGAGAATAGCCACCAGACTG +
Preference number: 4 (lower is better)
Translates to: VLGVGDLSFGRLSSRGPGAAPTD*RIATRL
Trigger: CAGTCTGGTGGCTATTCTGCAGTCAGTGGGGGCAGC...TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000555523.6
ENST00000611681.3
ENST00000625811.1
ENST00000629591.2
CDS-3UTR GCA 90 bp AGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCGCTGCCCCCACTGACTaGAGAATAGCCACCAGACTG +
Preference number: 4 (lower is better)
Translates to: RRLVLWKIVIQRPRKVISAAPTD*RIATRL
Trigger: CAGTCTGGTGGCTATTCTGCAGTCAGTGGGGGCAGC...GGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000555523.6
ENST00000611681.3
ENST00000625811.1
ENST00000629591.2
CDS-3UTR GCA 90 bp CTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGGCTGCCCCCACTGACTaGAGAATAGCCACCAGACTG +
Preference number: 4 (lower is better)
Translates to: LVLWKIVIQRPRKVISTKAAPTD*RIATRL
Trigger: CAGTCTGGTGGCTATTCTGCAGTCAGTGGGGGCAGC...CTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000555523.6
ENST00000611681.3
ENST00000625811.1
ENST00000629591.2
CDS-3UTR GCA 90 bp TCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGAGAGGCTGCCCCCACTGACTaGAGAATAGCCACCAGACTG +
Preference number: 4 (lower is better)
Translates to: SFGRLSSRGPGKSSPPREAAPTD*RIATRL
Trigger: CAGTCTGGTGGCTATTCTGCAGTCAGTGGGGGCAGC...CTCTCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000555523.6
ENST00000611681.3
ENST00000625811.1
ENST00000629591.2
CDS-3UTR GCA 90 bp TTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGAAGCTGTAAGAGGAGGTaGCAGCGCCCCAAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LSFGRLSSRGPGKSSPPRSCKRR*QRPKPA
Trigger: AGCTGGCTTGGGGCGCTGGCACCTCCTCTTACAGCT...TCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555523.6
ENST00000629591.2
CDS-3UTR GCA 90 bp GGCCCCAAGAGCTGTCCCAGCAAAGCCCCCGATAACTTTAGATGTCACAGAGAGCTGCTACAGCAGCCCTaGCTTCAGAAATATCCAGTC +
Preference number: 4 (lower is better)
Translates to: GPKSCPSKAPDNFRCHRELLQQP*LQKYPV
Trigger: GACTGGATATTTCTGAAGGCAGGGCTGCTGTAGCAG...CTCTCTGTGACATCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTCTTGGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556381.5
ENST00000629798.2
CDS-3UTR CCA 90 bp AGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCCACTCTCCTTTCCCATaGTTGGCCCCTTCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: SRRLVLWKIVIQRPRKVIHSPFP*LAPSPR
Trigger: CCGAGGCGAAGGGGCCAACCATGGGAAAGGAGAGTG...GATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp TTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGACACTCTCCTTTCCCATaGTTGGCCCCTTCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LSFGRLSSRGPGKSSPPRHSPFP*LAPSPR
Trigger: CCGAGGCGAAGGGGCCAACCATGGGAAAGGAGAGTG...TCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp TTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAACTCCCTGCCTCAGTGTaGTGTTCAGCTGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: FGSRRLVLWKIVIQRPRKLPASV*CSAGRG
Trigger: CCCCCTTCCAGCTGAACACCACACTGAGGCAGGGAG...TTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp TTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAATACAGCAGCCCTGCCTaGGTCCCATCCACTCTCCTT +
Preference number: 4 (lower is better)
Translates to: FGSRRLVLWKIVIQRPRKYSSPA*VPSTLL
Trigger: AAGGAGAGTGGATGGGACTCAGGCAGGGCTGCTGTA...TTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp AGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTACAGCAGCCCTGCCTaGGTCCCATCCACTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SRRLVLWKIVIQRPRKVIYSSPA*VPSTLL
Trigger: AAGGAGAGTGGATGGGACTCAGGCAGGGCTGCTGTA...GATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp GTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTTACAGCAGCCCTGCCTaGGTCCCATCCACTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VGDLSFGRLSSRGPGKSSYSSPA*VPSTLL
Trigger: AAGGAGAGTGGATGGGACTCAGGCAGGGCTGCTGTA...AGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp ACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAATACAGCAGCCCTGCCTaGGTCCCATCCACTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TCPLEDCHPEAQESHLHQYSSPA*VPSTLL
Trigger: AAGGAGAGTGGATGGGACTCAGGCAGGGCTGCTGTA...TTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR GCA 90 bp TTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGACTGCTACAGCAGCCCTaGCTGAGTCCCATCCACTCT +
Preference number: 4 (lower is better)
Translates to: LSFGRLSSRGPGKSSPPRLLQQP*LSPIHS
Trigger: AGAGTGGATGGGACTCAGGCAGGGCTGCTGTAGCAG...TCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp ATAGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCACTCCCTGCCTCAGTGTaGTGTTCAGCTGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: IVLGVGDLSFGRLSSRGPLPASV*CSAGRG
Trigger: CCCCCTTCCAGCTGAACACCACACTGAGGCAGGGAG...TGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp AATAGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCCTCCCTGCCTCAGTGTaGTGTTCAGCTGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: NSFGSRRLVLWKIVIQRPLPASV*CSAGRG
Trigger: CCCCCTTCCAGCTGAACACCACACTGAGGCAGGGAG...GGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp CTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGGGCTGGATCATCTCCTaGCTCTGGTCATCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LVLWKIVIQRPRKVISTKGWIIS*LWSSCP
Trigger: TGGACAGGATGACCAGAGCCAGGAGATGATCCAGCC...CTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554562.1
ENST00000626801.1
CDS-3UTR CCA 90 bp ATAGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGTTCAGCCTCGGGGCTaGATCATCTCCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: IVLGVGDLSFGRLSSRGPVQPRG*IISWLW
Trigger: CCAGAGCCAGGAGATGATCCAGCCCCGAGGCTGAAC...TGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554562.1
ENST00000626801.1
CDS-3UTR TCA 90 bp ATAGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCATACAGCAGCCCTGCCTaGGTCCCATCCACTCTCCTT +
Preference number: 4 (lower is better)
Translates to: IVLGVGDLSFGRLSSRGPYSSPA*VPSTLL
Trigger: AAGGAGAGTGGATGGGACTCAGGCAGGGCTGCTGTA...TGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR GCA 90 bp ATAGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCACTGCTACAGCAGCCCTaGCTGAGTCCCATCCACTCT +
Preference number: 4 (lower is better)
Translates to: IVLGVGDLSFGRLSSRGPLLQQP*LSPIHS
Trigger: AGAGTGGATGGGACTCAGGCAGGGCTGCTGTAGCAG...TGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR GCA 90 bp AGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCCACTCACCCACTGACTaGAGAATAGCCACCAGACTG +
Preference number: 4 (lower is better)
Translates to: RRLVLWKIVIQRPRKVISHSPTD*RIATRL
Trigger: CAGTCTGGTGGCTATTCTGCAGTCAGTGGGTGAGTG...GGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554562.1
ENST00000626801.1
CDS-3UTR CCA 90 bp CCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGAGAGCCTCCACTCGGATTCTTaGACTTCCACGTTACTGTGC +
Preference number: 4 (lower is better)
Translates to: PLEDCHPEAQESHLHQESLHSDS*TSTLLC
Trigger: GCACAGTAACGTGGAAGTCCAAGAATCCGAGTGGAG...GCTCTCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555523.6
ENST00000557218.5
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp AGAGCTGTCCCAGCAAAGCCCCCGATAACTTTAGATGTCACAGAGAGTCCAGCTATCATCTCCTGGCTCTaGTCATCCTGTCCAGAACAC +
Preference number: 4 (lower is better)
Translates to: RAVPAKPPITLDVTESPAIISWL*SSCPEH
Trigger: GTGTTCTGGACAGGATGACCAGAGCCAGGAGATGAT...AGCTGGACTCTCTGTGACATCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS-3UTR TCA 90 bp TTAAATAGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGGCCCCTTCGCCTCGGTaGGCCTCCACTCGGATTCTT +
Preference number: 4 (lower is better)
Translates to: LNSFGSRRLVLWKIVIQRAPSPR*ASTRIL
Trigger: AAGAATCCGAGTGGAGGCTCACCGAGGCGAAGGGGC...CCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACTATTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp GGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACTCCACTCGGATTCTTaGACTTCCACGTTACTGTGC +
Preference number: 4 (lower is better)
Translates to: GDLSFGRLSSRGPGKSSPLHSDS*TSTLLC
Trigger: GCACAGTAACGTGGAAGTCCAAGAATCCGAGTGGAG...TGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555523.6
ENST00000557218.5
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp AGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCCTCCACTCGGATTCTTaGACTTCCACCTTCTGCATC +
Preference number: 4 (lower is better)
Translates to: RLVLWKIVIQRPRKVISTLHSDS*TSTFCI
Trigger: GATGCAGAAGGTGGAAGTCCAAGAATCCGAGTGGAG...GGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553664.1
ENST00000625811.1
CDS-3UTR CCA 90 bp GTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTATCATCTCCTGGCTCTaGTCATCCTGTCCAGAACAC +
Preference number: 4 (lower is better)
Translates to: VGDLSFGRLSSRGPGKSSIISWL*SSCPEH
Trigger: GTGTTCTGGACAGGATGACCAGAGCCAGGAGATGAT...AGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554562.1
ENST00000626801.1
CDS-3UTR CCA 90 bp TTAAATAGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGGTTCAGCCTCGGGGCTaGATCATCTCCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LNSFGSRRLVLWKIVIQRVQPRG*IISWLW
Trigger: CCAGAGCCAGGAGATGATCCAGCCCCGAGGCTGAAC...CCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACTATTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554562.1
ENST00000626801.1
CDS-3UTR CCA 90 bp TCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGAGAGCCAGGAGTATATTACTaGAAAGGGGTCCCAATCCAG +
Preference number: 4 (lower is better)
Translates to: SFGRLSSRGPGKSSPPREPGVYY*KGVPIQ
Trigger: CTGGATTGGGACCCCTTTCCAGTAATATACTCCTGG...CTCTCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557066.5
ENST00000627939.2
CDS-3UTR CCA 90 bp TTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAACTCCACTCGGATTCTTaGACTTCCACCTTCTGCATC +
Preference number: 4 (lower is better)
Translates to: FGSRRLVLWKIVIQRPRKLHSDS*TSTFCI
Trigger: GATGCAGAAGGTGGAAGTCCAAGAATCCGAGTGGAG...TTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553664.1
ENST00000625811.1
CDS-3UTR GCA 90 bp CTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGTGGACTTCCACCTTCTaGATCTCGCATAGTAACGTA +
Preference number: 4 (lower is better)
Translates to: LVLWKIVIQRPRKVISTKWTSTF*ISHSNV
Trigger: TACGTTACTATGCGAGATGCAGAAGGTGGAAGTCCA...CTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553664.1
ENST00000625811.1
CDS-3UTR CCA 90 bp ATAGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCACTCCACTCGGATTCTTaGACTTCCACGTTACTGTGC +
Preference number: 4 (lower is better)
Translates to: IVLGVGDLSFGRLSSRGPLHSDS*TSTLLC
Trigger: GCACAGTAACGTGGAAGTCCAAGAATCCGAGTGGAG...TGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555523.6
ENST00000557218.5
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp TTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAACCAGGAGTATATTACTaGAAAGGGGTCCCAATCCAG +
Preference number: 4 (lower is better)
Translates to: FGSRRLVLWKIVIQRPRKPGVYY*KGVPIQ
Trigger: CTGGATTGGGACCCCTTTCCAGTAATATACTCCTGG...TTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557066.5
ENST00000627939.2
CDS-3UTR TCA 90 bp GTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAATTCAGGATCTGGTTTaGATAAAGGTTACTGTGCGG +
Preference number: 4 (lower is better)
Translates to: VLGVGDLSFGRLSSRGPGIQDLV*IKVTVR
Trigger: CCGCACAGTAACCTTTATTCAAACCAGATCCTGAAT...TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393115.7
ENST00000611681.3
CDS-3UTR TCA 90 bp CTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGATTCAGGATCTGGTTTaGATAAAGGTTACTGTGCGG +
Preference number: 4 (lower is better)
Translates to: LVLWKIVIQRPRKVISTKIQDLV*IKVTVR
Trigger: CCGCACAGTAACCTTTATTCAAACCAGATCCTGAAT...CTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393115.7
ENST00000611681.3
CDS-3UTR TCA 90 bp AGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCCTTCCACCTGTTGGTTaGGTTTTGACTTTATTCAGG +
Preference number: 4 (lower is better)
Translates to: RLVLWKIVIQRPRKVISTLPPVG*VLTLFR
Trigger: CCTGAATAAAGTCAAAACTCAACCAACAGGTGGAAG...GGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000554544.5
ENST00000557066.5
ENST00000611681.3
ENST00000627633.2
ENST00000627939.2
CDS-3UTR TCA 90 bp AGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGCTTCCACCTGTTGGTTaGGTTTTGACTTTATTCAGG +
Preference number: 4 (lower is better)
Translates to: SFGSRRLVLWKIVIQRPRLPPVG*VLTLFR
Trigger: CCTGAATAAAGTCAAAACTCAACCAACAGGTGGAAG...CCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000554544.5
ENST00000557066.5
ENST00000611681.3
ENST00000627633.2
ENST00000627939.2
CDS-3UTR TCA 90 bp GGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCACTTCCACCTGTTGGTTaGGTTTTGACTTTATTCAGG +
Preference number: 4 (lower is better)
Translates to: GVGDLSFGRLSSRGPGKSLPPVG*VLTLFR
Trigger: CCTGAATAAAGTCAAAACTCAACCAACAGGTGGAAG...TGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000554544.5
ENST00000557066.5
ENST00000611681.3
ENST00000627633.2
ENST00000627939.2
CDS-3UTR TCA 90 bp GACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCACTTCCACCTGTTGGTTaGGTTTTGACTTTATTCAGG +
Preference number: 4 (lower is better)
Translates to: DLSFGRLSSRGPGKSSPPLPPVG*VLTLFR
Trigger: CCTGAATAAAGTCAAAACTCAACCAACAGGTGGAAG...TGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000554544.5
ENST00000557066.5
ENST00000611681.3
ENST00000627633.2
ENST00000627939.2
3UTR CAA 72 bp ATAGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATaGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCA +
Preference number: 4 (lower is better)
Translates to: IVLGVGDLSFGR*SSRGPGKSSPP
Trigger: TGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR TCA 90 bp TTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGACTTCCACCTGTTGGTTaGGTTTTGACTTTATTCAGG +
Preference number: 4 (lower is better)
Translates to: LSFGRLSSRGPGKSSPPRLPPVG*VLTLFR
Trigger: CCTGAATAAAGTCAAAACTCAACCAACAGGTGGAAG...TCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000554544.5
ENST00000557066.5
ENST00000611681.3
ENST00000627633.2
ENST00000627939.2
CDS-3UTR GCA 90 bp TTAAATAGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCACTCACCCACTGACTaGAGAATAGCCACCAGACTG +
Preference number: 4 (lower is better)
Translates to: LNSFGSRRLVLWKIVIQRHSPTD*RIATRL
Trigger: CAGTCTGGTGGCTATTCTGCAGTCAGTGGGTGAGTG...CCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACTATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554562.1
ENST00000626801.1
CDS-3UTR CCA 90 bp CCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGAGAGCTGGACTTCCACCTGTTaGTTGAGTTTTGACTTTATT +
Preference number: 4 (lower is better)
Translates to: PLEDCHPEAQESHLHQESWTSTC*LSFDFI
Trigger: AATAAAGTCAAAACTCAACCAACAGGTGGAAGTCCA...GCTCTCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000554544.5
ENST00000557066.5
ENST00000611681.3
ENST00000627633.2
ENST00000627939.2
CDS-3UTR TCA 90 bp ATAGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCACTTCCACCTGTTGGTTaGGTTTTGACTTTATTCAGG +
Preference number: 4 (lower is better)
Translates to: IVLGVGDLSFGRLSSRGPLPPVG*VLTLFR
Trigger: CCTGAATAAAGTCAAAACTCAACCAACAGGTGGAAG...TGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000554544.5
ENST00000557066.5
ENST00000611681.3
ENST00000627633.2
ENST00000627939.2
CDS-3UTR GCA 90 bp GTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTTCAGCCAATTGGTGTTaGGGTCTATTTCCTTTAGTT +
Preference number: 4 (lower is better)
Translates to: VGDLSFGRLSSRGPGKSSSANWC*GLFPLV
Trigger: AACTAAAGGAAATAGACCGCAACACCAATTGGCTGA...AGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557066.5
ENST00000627939.2
CDS-3UTR CCA 90 bp TGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGAGTGGACTTCCACCTGTTaGTTGAGTTTTGACTTTATT +
Preference number: 4 (lower is better)
Translates to: CPLEDCHPEAQESHLHQEWTSTC*LSFDFI
Trigger: AATAAAGTCAAAACTCAACCAACAGGTGGAAGTCCA...CTCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000554544.5
ENST00000557066.5
ENST00000611681.3
ENST00000627633.2
ENST00000627939.2
CDS-3UTR CCA 90 bp TTAAATAGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCTCCACTCGGATTCTTaGACTTCCACGTTACTGTGC +
Preference number: 4 (lower is better)
Translates to: LNSFGSRRLVLWKIVIQRLHSDS*TSTLLC
Trigger: GCACAGTAACGTGGAAGTCCAAGAATCCGAGTGGAG...CCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACTATTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555523.6
ENST00000557218.5
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CCA 90 bp TTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGATGGACTTCCACCTGTTaGTTGAGTTTTGACTTTATT +
Preference number: 4 (lower is better)
Translates to: LSFGRLSSRGPGKSSPPRWTSTC*LSFDFI
Trigger: AATAAAGTCAAAACTCAACCAACAGGTGGAAGTCCA...TCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000554544.5
ENST00000557066.5
ENST00000611681.3
ENST00000627633.2
ENST00000627939.2
CDS-3UTR CCA 90 bp AATAGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCTGGACTTCCACCTGTTaGTTGAGTTTTGACTTTATT +
Preference number: 4 (lower is better)
Translates to: NSFGSRRLVLWKIVIQRPWTSTC*LSFDFI
Trigger: AATAAAGTCAAAACTCAACCAACAGGTGGAAGTCCA...GGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000554544.5
ENST00000557066.5
ENST00000611681.3
ENST00000627633.2
ENST00000627939.2
CDS-3UTR GCA 90 bp TTAAATAGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGTCAGCCAATTGGTGTTaGGGTCTATTTCCTTTAGTT +
Preference number: 4 (lower is better)
Translates to: LNSFGSRRLVLWKIVIQRSANWC*GLFPLV
Trigger: AACTAAAGGAAATAGACCGCAACACCAATTGGCTGA...CCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACTATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557066.5
ENST00000627939.2
CDS TCA 90 bp TGCAGCTCCAGTCCCGGACCAAGCCACCCGCGTCTCTCAGTGGGATaGCTGGAGGAGCTTCCTAACTTGTCTCTCTGCCTCTGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: CSSSPGPSHPRLSVG*LEELPNLSLCLCSG
Trigger: GCCAGAGCAGAGGCAGAGAGACAAGTTAGGAAGCTCCTCCAGTCATCCCACTGAGAGACGCGGGTGGCTTGGTCCGGGACTGGAGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000554166.5
ENST00000555341.5
ENST00000556381.5
ENST00000627505.2
ENST00000627570.2
ENST00000629798.2
CDS CCA 90 bp AGATGGACCTCTGTGATCCTCTGTAGCCAGGGCAATCCTGTGGGATaGAGCCTTGGGGCCCCTTTGGGAGCTGTGGGAGTCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: RWTSVILCSQGNPVG*SLGAPLGAVGVSSA
Trigger: GGCTGAGCTGACTCCCACAGCTCCCAAAGGGGCCCCAAGGCTCCATCCCACAGGATTGCCCTGGCTACAGAGGATCACAGAGGTCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553350.5
ENST00000626435.2
CDS TCA 90 bp CTGGCTTCCCCAACATTGTGCACCCTGGGCAGAGATGGACCTCTGTaGTCCTCTGTAGCCAGGGCAATCCTGTGGGATGGAGCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: LASPTLCTLGRDGPL*SSVARAILWDGALG
Trigger: CCCCAAGGCTCCATCCCACAGGATTGCCCTGGCTACAGAGGATCACAGAGGTCCATCTCTGCCCAGGGTGCACAATGTTGGGGAAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553350.5
ENST00000626435.2
CDS-3UTR CAA 90 bp GGTGTTCAGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGCACCTCCACTCGGATTCTaGGACTTCCACCTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: GVQLEGGEPSQAPRAVPAPPLGF*DFHLLH
Trigger: ATGCAGAAGGTGGAAGTCCAAGAATCCGAGTGGAGG...TGCTGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCTGAACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553664.1
ENST00000625811.1
CDS TCA 90 bp AGTCCCATCCACTCTCCTTTCCCATGGTTGGCCCCTTCGCCTCGGTaGGCCTCCACTCGGATTCTTGGACTTCCACGTTACTGTGCGGGA +
Preference number: 5 (lower is better)
Translates to: SPIHSPFPWLAPSPR*ASTRILGLPRYCAG
Trigger: TCCCGCACAGTAACGTGGAAGTCCAAGAATCCGAGTGGAGGCTCACCGAGGCGAAGGGGCCAACCATGGGAAAGGAGAGTGGATGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000553350.5
ENST00000554166.5
ENST00000555523.6
ENST00000556381.5
ENST00000557218.5
ENST00000557600.5
ENST00000626435.2
ENST00000627505.2
ENST00000628436.2
ENST00000629051.2
ENST00000629591.2
ENST00000629798.2
CDS TCA 90 bp GATCATCTCCTGGCTCTGGTCATCCTGTCCAGAACACTCACCCACTaGCTGCAGAATAGCCACCAGACTGCCAGCAGCAACTCCGCCCCC +
Preference number: 5 (lower is better)
Translates to: DHLLALVILSRTLTH*LQNSHQTASSNSAP
Trigger: GGGGGCGGAGTTGCTGCTGGCAGTCTGGTGGCTATTCTGCAGTCAGTGGGTGAGTGTTCTGGACAGGATGACCAGAGCCAGGAGATGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS TCA 90 bp AGTCCCATCCACTCTCCTTTCCCATGGTTGGCCCCTTCGCCTCGGTaGGCCTCCACTCGGATTCTTGGACTTCCACCTTCTGCATCTCGC +
Preference number: 5 (lower is better)
Translates to: SPIHSPFPWLAPSPR*ASTRILGLPPSASR
Trigger: GCGAGATGCAGAAGGTGGAAGTCCAAGAATCCGAGTGGAGGCTCACCGAGGCGAAGGGGCCAACCATGGGAAAGGAGAGTGGATGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553664.1
ENST00000625811.1
CDS TCA 90 bp GAACCCGGAATCCATCCTCTCAGCAGCTCAGGCCAAAAGCCTTCCTaGGTCCCATCCACTCTCCTTTCCCATGGTTGGCCCCTTCGCCTC +
Preference number: 5 (lower is better)
Translates to: EPGIHPLSSSGQKPS*VPSTLLSHGWPLRL
Trigger: GAGGCGAAGGGGCCAACCATGGGAAAGGAGAGTGGATGGGACTCAGGAAGGCTTTTGGCCTGAGCTGCTGAGAGGATGGATTCCGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555341.5
ENST00000627570.2
CDS CCA 90 bp ACTTCTGCAGCTCCAGTCCCGGACCAAGCCACCCGCGTCTCTCAGTaGGATGACTGGAGGAGCTTCCTAACTTGTCTCTCTGCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: TSAAPVPDQATRVSQ*DDWRSFLTCLSASA
Trigger: AGCAGAGGCAGAGAGACAAGTTAGGAAGCTCCTCCAGTCATCCCACTGAGAGACGCGGGTGGCTTGGTCCGGGACTGGAGCTGCAGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000554166.5
ENST00000555341.5
ENST00000556381.5
ENST00000627505.2
ENST00000627570.2
ENST00000629798.2
CDS CCA 90 bp CACTCTGCCCACTCCACCGCTACCCAGCTATGTCTTGGAGAATCCTaGGTTTGGTCAAAGCCAGTTTCTCCCAGAGGCTCAGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: HSAHSTATQLCLGES*VWSKPVSPRGSGLG
Trigger: CCCCAGCCCTGAGCCTCTGGGAGAAACTGGCTTTGACCAAACCCAGGATTCTCCAAGACATAGCTGGGTAGCGGTGGAGTGGGCAGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557600.5
ENST00000629051.2
CDS-3UTR CAA 90 bp GTGGTGTTCAGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGTTGTCCTTTGGAAGATaGTCATCCAGAGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: VVFSWKGVNPARPQELSQLSFGR*SSRGPG
Trigger: TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA...CTGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCTGAACACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000553664.1
ENST00000554562.1
ENST00000625811.1
ENST00000626801.1
CDS CCA 90 bp TGGTTAAGGGCTGGCTTCCCCAACATTGTGCACCCTGGGCAGAGATaGACCTCTGTGATCCTCTGTAGCCAGGGCAATCCTGTGGGATGG +
Preference number: 5 (lower is better)
Translates to: WLRAGFPNIVHPGQR*TSVILCSQGNPVGW
Trigger: CCATCCCACAGGATTGCCCTGGCTACAGAGGATCACAGAGGTCCATCTCTGCCCAGGGTGCACAATGTTGGGGAAGCCAGCCCTTAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553350.5
ENST00000626435.2
CDS-3UTR CAA 90 bp TGTGGTGTTCAGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCATTGTCCTTTGGAAGATaGTCATCCAGAGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: CGVQLEGGEPSQAPRAVPLSFGR*SSRGPG
Trigger: TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA...TGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCTGAACACCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000553664.1
ENST00000554562.1
ENST00000625811.1
ENST00000626801.1
CDS GCA 90 bp TACCATGGGCCCTGCTTTAGACGGGGAGGAATCCCGGGCTGTGACTaGTCCAATGACTCATCCGGGGTTGCATGGTTTGTACTTGGTGGA +
Preference number: 5 (lower is better)
Translates to: YHGPCFRRGGIPGCD*SNDSSGVAWFVLGG
Trigger: TCCACCAAGTACAAACCATGCAACCCCGGATGAGTCATTGGAGCAGTCACAGCCCGGGATTCCTCCCCGTCTAAAGCAGGGCCCATGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557600.5
ENST00000629051.2
CDS CCA 90 bp AGGTCCCCATCACTCTGCCCACTCCACCGCTACCCAGCTATGTCTTaGAGAATCCTGGGTTTGGTCAAAGCCAGTTTCTCCCAGAGGCTC +
Preference number: 5 (lower is better)
Translates to: RSPSLCPLHRYPAMS*RILGLVKASFSQRL
Trigger: GAGCCTCTGGGAGAAACTGGCTTTGACCAAACCCAGGATTCTCCAAGACATAGCTGGGTAGCGGTGGAGTGGGCAGAGTGATGGGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557600.5
ENST00000629051.2
CDS TCA 90 bp CTTCCTAACTTGTCTCTCTGCCTCTGCTCTGGCCCAAGTCACTGCTaGACCCGGAATCCATCCTCTCAGCAGCTCAGGCCAAAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: LPNLSLCLCSGPSHC*TRNPSSQQLRPKAF
Trigger: GAAGGCTTTTGGCCTGAGCTGCTGAGAGGATGGATTCCGGGTTCAGCAGTGACTTGGGCCAGAGCAGAGGCAGAGAGACAAGTTAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000554166.5
ENST00000555341.5
ENST00000556381.5
ENST00000627505.2
ENST00000627570.2
ENST00000629798.2
CDS-3UTR CAA 90 bp GTGTTCAGCTGGAAGGGGGTGAACCCAGCCAGGCCCCAAGAGCTGTCCCAGCAATTGGGAGTAGGAGACTaGTCCTTTGGAAGATTGTCA +
Preference number: 5 (lower is better)
Translates to: VFSWKGVNPARPQELSQQLGVGD*SFGRLS
Trigger: TGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAA...TTGCTGGGACAGCTCTTGGGGCCTGGCTGGGTTCACCCCCTTCCAGCTGAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000553664.1
ENST00000554562.1
ENST00000625811.1
ENST00000626801.1
CDS-3UTR CAA 90 bp ACCCAGCCAGGCCCCAAGAGCTGTCCCAGCAAAGCCCCCGATAACTTTAGATGTCCTCCACTCGGATTCTaGGACTTCCACGTTACTGTG +
Preference number: 5 (lower is better)
Translates to: TQPGPKSCPSKAPDNFRCPPLGF*DFHVTV
Trigger: CACAGTAACGTGGAAGTCCAAGAATCCGAGTGGAGG...ACATCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTCTTGGGGCCTGGCTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556381.5
ENST00000629798.2
CDS-3UTR CAA 90 bp GCAAAGCCCCCGATAACTTTAGATGTCACAGAGAGTCCAGCTGCCCCTGCAGGGCCTCCACTCGGATTCTaGGACTTCCACGTTACTGTG +
Preference number: 5 (lower is better)
Translates to: AKPPITLDVTESPAAPAGPPLGF*DFHVTV
Trigger: CACAGTAACGTGGAAGTCCAAGAATCCGAGTGGAGG...CCCTGCAGGGGCAGCTGGACTCTCTGTGACATCTAAAGTTATCGGGGGCTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556381.5
ENST00000629798.2
CDS CCA 90 bp CCCATGGTTGGCCCCTTCGCCTCGGTGAGCCTCCACTCGGATTCTTaGACTTCCACCTTCTGCATCTCGCATAGTAACGTAAGAAATGGA +
Preference number: 5 (lower is better)
Translates to: PMVGPFASVSLHSDS*TSTFCISHSNVRNG
Trigger: TCCATTTCTTACGTTACTATGCGAGATGCAGAAGGTGGAAGTCCAAGAATCCGAGTGGAGGCTCACCGAGGCGAAGGGGCCAACCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553664.1
ENST00000625811.1
CDS GCA 90 bp CATGGTTTGTACTTGGTGGAAGCTGAGAGTAGCCCCAGCTCTGGCTaGCTCCAAAGCCCTGTGCCTTTAATGGCTTTGCTTTGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: HGLYLVEAESSPSSG*LQSPVPLMALLCFL
Trigger: CAGGAAGCAAAGCAAAGCCATTAAAGGCACAGGGCTTTGGAGGCAGCCAGAGCTGGGGCTACTCTCAGCTTCCACCAAGTACAAACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557600.5
ENST00000629051.2
CDS GCA 90 bp TTCGCCTCGGTGAGCCTCCACTCGGATTCTTGGACTTCCACCTTCTaGATCTCGCATAGTAACGTAAGAAATGGATCCTGGGACTCTGCT +
Preference number: 5 (lower is better)
Translates to: FASVSLHSDSWTSTF*ISHSNVRNGSWDSA
Trigger: AGCAGAGTCCCAGGATCCATTTCTTACGTTACTATGCGAGATGCAGAAGGTGGAAGTCCAAGAATCCGAGTGGAGGCTCACCGAGGCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553664.1
ENST00000625811.1
CDS-3UTR CAA 90 bp GGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCCAAGAGAGGGTGCTaGGACCTCACACAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: GVGDLSFGRLSSRGPGKSSKRGC*DLTQEE
Trigger: CTCTTCCTGTGTGAGGTCCAAGCACCCTCTCTTGGA...TGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557066.5
ENST00000627939.2
CDS-3UTR CAA 90 bp AGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCTCCAAGAGAGGGTGCTaGGACCTCACACAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: RLVLWKIVIQRPRKVISTSKRGC*DLTQEE
Trigger: CTCTTCCTGTGTGAGGTCCAAGCACCCTCTCTTGGA...GGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557066.5
ENST00000627939.2
CDS TCA 90 bp AGGCCAGAGGAGATTCAAAGGGAGGGGAAAGAAATTCCTACCTCTTaGTGGGAGGAGCTGTACAGCCATGCTGAAAGGGCGGAGAATATG +
Preference number: 5 (lower is better)
Translates to: RPEEIQREGKEIPTS*WEELYSHAERAENM
Trigger: CATATTCTCCGCCCTTTCAGCATGGCTGTACAGCTCCTCCCATCAAGAGGTAGGAATTTCTTTCCCCTCCCTTTGAATCTCCTCTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553350.5
ENST00000626435.2
CDS-3UTR CAA 90 bp TTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGCCTCCACTCGGATTCTaGGACTTCCACCTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: LGVGDLSFGRLSSRGPGKPPLGF*DFHLLV
Trigger: AACCAACAGGTGGAAGTCCAAGAATCCGAGTGGAGG...CTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000554544.5
ENST00000557066.5
ENST00000611681.3
ENST00000627633.2
ENST00000627939.2
CDS-3UTR CAA 90 bp AGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCCCTCCACTCGGATTCTaGGACTTCCACCTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: RLVLWKIVIQRPRKVISTPPLGF*DFHLLV
Trigger: AACCAACAGGTGGAAGTCCAAGAATCCGAGTGGAGG...GGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000554544.5
ENST00000557066.5
ENST00000611681.3
ENST00000627633.2
ENST00000627939.2
CDS-3UTR CAA 90 bp AGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGCCTCCACTCGGATTCTaGGACTTCCACCTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: SFGSRRLVLWKIVIQRPRPPLGF*DFHLLV
Trigger: AACCAACAGGTGGAAGTCCAAGAATCCGAGTGGAGG...CCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393115.7
ENST00000554544.5
ENST00000557066.5
ENST00000611681.3
ENST00000627633.2
ENST00000627939.2
CDS-3UTR CAA 90 bp CTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGCCTCCACTCGGATTCTaGGACTTCCACGTTACTGTG +
Preference number: 5 (lower is better)
Translates to: LVLWKIVIQRPRKVISTKPPLGF*DFHVTV
Trigger: CACAGTAACGTGGAAGTCCAAGAATCCGAGTGGAGG...CTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555523.6
ENST00000557218.5
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CAA 90 bp GGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCACCTCCACTCGGATTCTaGGACTTCCACCTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: GVGDLSFGRLSSRGPGKSPPLGF*DFHLLH
Trigger: ATGCAGAAGGTGGAAGTCCAAGAATCCGAGTGGAGG...TGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553664.1
ENST00000625811.1
CDS-3UTR CAA 90 bp GGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCATTGTCCTTTGGAAGATaGTCATCCAGAGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: GDLSFGRLSSRGPGKSSPLSFGR*SSRGPG
Trigger: TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA...TGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CAA 90 bp CTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGTTGTCCTTTGGAAGATaGTCATCCAGAGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: LVLWKIVIQRPRKVISTKLSFGR*SSRGPG
Trigger: TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA...CTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CAA 90 bp GGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATTGTCCTTTGGAAGATaGTCATCCAGAGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: GVGDLSFGRLSSRGPGKSLSFGR*SSRGPG
Trigger: TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA...TGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CAA 90 bp ACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAACCTCCACTCGGATTCTaGGACTTCCACGTTACTGTG +
Preference number: 5 (lower is better)
Translates to: TCPLEDCHPEAQESHLHQPPLGF*DFHVTV
Trigger: CACAGTAACGTGGAAGTCCAAGAATCCGAGTGGAGG...TTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555523.6
ENST00000557218.5
ENST00000628436.2
ENST00000629591.2
CDS CCA 90 bp GAATATGGTCGTTTCTGTAATTTACCCCAAGTCCCTTCACATCATTaGTTAAGGGCTGGCTTCCCCAACATTGTGCACCCTGGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: EYGRFCNLPQVPSHH*LRAGFPNIVHPGQR
Trigger: TCTCTGCCCAGGGTGCACAATGTTGGGGAAGCCAGCCCTTAACCAATGATGTGAAGGGACTTGGGGTAAATTACAGAAACGACCATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553350.5
ENST00000626435.2
CDS-3UTR CAA 90 bp GTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTTTGTCCTTTGGAAGATaGTCATCCAGAGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: VGDLSFGRLSSRGPGKSSLSFGR*SSRGPG
Trigger: TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA...AGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CAA 90 bp AGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTTGTCCTTTGGAAGATaGTCATCCAGAGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: SRRLVLWKIVIQRPRKVILSFGR*SSRGPG
Trigger: TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA...GATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CAA 90 bp TTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGATTGTCCTTTGGAAGATaGTCATCCAGAGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: LSFGRLSSRGPGKSSPPRLSFGR*SSRGPG
Trigger: TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA...TCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CAA 90 bp TTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAATTGTCCTTTGGAAGATaGTCATCCAGAGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: FGSRRLVLWKIVIQRPRKLSFGR*SSRGPG
Trigger: TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA...TTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CAA 90 bp CCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGAGAGCTTGGGAGTAGGAGACTaGTCCTTTGGAAGATTGTCA +
Preference number: 5 (lower is better)
Translates to: PLEDCHPEAQESHLHQESLGVGD*SFGRLS
Trigger: TGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAA...GCTCTCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CAA 90 bp GGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCTTGGGAGTAGGAGACTaGTCCTTTGGAAGATTGTCA +
Preference number: 5 (lower is better)
Translates to: GSRRLVLWKIVIQRPRKVLGVGD*SFGRLS
Trigger: TGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAA...GACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CAA 90 bp ATAGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCACCTCCACTCGGATTCTaGGACTTCCACGTTACTGTG +
Preference number: 5 (lower is better)
Translates to: IVLGVGDLSFGRLSSRGPPPLGF*DFHVTV
Trigger: CACAGTAACGTGGAAGTCCAAGAATCCGAGTGGAGG...TGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555523.6
ENST00000557218.5
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CAA 90 bp AATAGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCTTGTCCTTTGGAAGATaGTCATCCAGAGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: NSFGSRRLVLWKIVIQRPLSFGR*SSRGPG
Trigger: TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAA...GGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CAA 90 bp TCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGAGAGTTGGGAGTAGGAGACTaGTCCTTTGGAAGATTGTCA +
Preference number: 5 (lower is better)
Translates to: SFGRLSSRGPGKSSPPRELGVGD*SFGRLS
Trigger: TGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAA...CTCTCTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CAA 90 bp GGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCATTGGGAGTAGGAGACTaGTCCTTTGGAAGATTGTCA +
Preference number: 5 (lower is better)
Translates to: GDLSFGRLSSRGPGKSSPLGVGD*SFGRLS
Trigger: TGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAA...TGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CAA 90 bp GTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGATTGGGAGTAGGAGACTaGTCCTTTGGAAGATTGTCA +
Preference number: 5 (lower is better)
Translates to: VLGVGDLSFGRLSSRGPGLGVGD*SFGRLS
Trigger: TGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAA...TCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CAA 90 bp GGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATTGGGAGTAGGAGACTaGTCCTTTGGAAGATTGTCA +
Preference number: 5 (lower is better)
Translates to: GVGDLSFGRLSSRGPGKSLGVGD*SFGRLS
Trigger: TGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAA...TGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CAA 90 bp CTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAAGTTGGGAGTAGGAGACTaGTCCTTTGGAAGATTGTCA +
Preference number: 5 (lower is better)
Translates to: LVLWKIVIQRPRKVISTKLGVGD*SFGRLS
Trigger: TGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAA...CTTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS TCA 90 bp GAAAGAAATTCCTACCTCTTGATGGGAGGAGCTGTACAGCCATGCTaGAAGGGCGGAGAATATGGTCGTTTCTGTAATTTACCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: ERNSYLLMGGAVQPC*KGGEYGRFCNLPQV
Trigger: GACTTGGGGTAAATTACAGAAACGACCATATTCTCCGCCCTTTCAGCATGGCTGTACAGCTCCTCCCATCAAGAGGTAGGAATTTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553350.5
ENST00000626435.2
CDS-3UTR CAA 90 bp ACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCAATTGGGAGTAGGAGACTaGTCCTTTGGAAGATTGTCA +
Preference number: 5 (lower is better)
Translates to: TCPLEDCHPEAQESHLHQLGVGD*SFGRLS
Trigger: TGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAA...TTGGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CAA 90 bp GTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTTTGGGAGTAGGAGACTaGTCCTTTGGAAGATTGTCA +
Preference number: 5 (lower is better)
Translates to: VGDLSFGRLSSRGPGKSSLGVGD*SFGRLS
Trigger: TGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAA...AGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS TCA 90 bp GCTTCTGACTCAGTGGATGGGCTACCAGCATTTGTCAAATACTTTTaGGGAATGAGACACAGCTCAGCTGACATACTCCCTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: ASDSVDGLPAFVKYF*GMRHSSADILPSKV
Trigger: GACTTTTGAAGGGAGTATGTCAGCTGAGCTGTGTCTCATTCCTCAAAAGTATTTGACAAATGCTGGTAGCCCATCCACTGAGTCAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557600.5
ENST00000629051.2
CDS-3UTR CAA 90 bp AGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCAGGAAAGTCATCTCCACCTATTCAGGATCTGGTTaGAATAAAGGTTACTGTGCG +
Preference number: 5 (lower is better)
Translates to: RLVLWKIVIQRPRKVISTYSGSG*NKGYCA
Trigger: CGCACAGTAACCTTTATTCAAACCAGATCCTGAATA...GGTGGAGATGACTTTCCTGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393115.7
ENST00000611681.3
CDS-3UTR CAA 90 bp ATAGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCATTGGGAGTAGGAGACTaGTCCTTTGGAAGATTGTCA +
Preference number: 5 (lower is better)
Translates to: IVLGVGDLSFGRLSSRGPLGVGD*SFGRLS
Trigger: TGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAA...TGGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS-3UTR CAA 90 bp AATAGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGCCCTATTCAGGATCTGGTTaGAATAAAGGTTACTGTGCG +
Preference number: 5 (lower is better)
Translates to: NSFGSRRLVLWKIVIQRPYSGSG*NKGYCA
Trigger: CGCACAGTAACCTTTATTCAAACCAGATCCTGAATA...GGGCCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393115.7
ENST00000611681.3
CDS-3UTR CAA 90 bp TTAAATAGTTTTGGGAGTAGGAGACTTGTCCTTTGGAAGATTGTCATCCAGAGGTTGGGAGTAGGAGACTaGTCCTTTGGAAGATTGTCA +
Preference number: 5 (lower is better)
Translates to: LNSFGSRRLVLWKIVIQRLGVGD*SFGRLS
Trigger: TGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAA...CCTCTGGATGACAATCTTCCAAAGGACAAGTCTCCTACTCCCAAAACTATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000393115.7
ENST00000553664.1
ENST00000554544.5
ENST00000554562.1
ENST00000555523.6
ENST00000557066.5
ENST00000557218.5
ENST00000611681.3
ENST00000625811.1
ENST00000626801.1
ENST00000627633.2
ENST00000627939.2
ENST00000628436.2
ENST00000629591.2
CDS TCA 72 bp AGTCCCGGACCAAGCCACCCGCGTCTCTCAGTGGGATaGCTGGAGGAGCTTCCTAACTTGTCTCTCTGCCTC +
Preference number: 6 (lower is better)
Translates to: SPGPSHPRLSVG*LEELPNLSLCL
Trigger: GAGGCAGAGAGACAAGTTAGGAAGCTCCTCCAGTCATCCCACTGAGAGACGCGGGTGGCTTGGTCCGGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000554166.5
ENST00000555341.5
ENST00000556381.5
ENST00000627505.2
ENST00000627570.2
ENST00000629798.2
CDS CAA 90 bp TCCCGGGCTGTGACTGCTCCAATGACTCATCCGGGGTTGCATGGTTaGTACTTGGTGGAAGCTGAGAGTAGCCCCAGCTCTGGCTGCCTC +
Preference number: 6 (lower is better)
Translates to: SRAVTAPMTHPGLHG*YLVEAESSPSSGCL
Trigger: GAGGCAGCCAGAGCTGGGGCTACTCTCAGCTTCCACCAAGTACAAACCATGCAACCCCGGATGAGTCATTGGAGCAGTCACAGCCCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557600.5
ENST00000629051.2
CDS TCA 72 bp CACTCTCCTTTCCCATGGTTGGCCCCTTCGCCTCGGTaGGCCTCCACTCGGATTCTTGGACTTCCACCTGTT +
Preference number: 6 (lower is better)
Translates to: HSPFPWLAPSPR*ASTRILGLPPV
Trigger: AACAGGTGGAAGTCCAAGAATCCGAGTGGAGGCTCACCGAGGCGAAGGGGCCAACCATGGGAAAGGAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393115.7
ENST00000554544.5
ENST00000555341.5
ENST00000557066.5
ENST00000611681.3
ENST00000627570.2
ENST00000627633.2
ENST00000627939.2
CDS TCA 72 bp CACTCTCCTTTCCCATGGTTGGCCCCTTCGCCTCGGTaGGCCTCCACTCGGATTCTTGGACTTCCACGTTAC +
Preference number: 6 (lower is better)
Translates to: HSPFPWLAPSPR*ASTRILGLPRY
Trigger: GTAACGTGGAAGTCCAAGAATCCGAGTGGAGGCTCACCGAGGCGAAGGGGCCAACCATGGGAAAGGAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000553350.5
ENST00000554166.5
ENST00000555523.6
ENST00000556381.5
ENST00000557218.5
ENST00000557600.5
ENST00000626435.2
ENST00000627505.2
ENST00000628436.2
ENST00000629051.2
ENST00000629591.2
ENST00000629798.2
CDS TCA 72 bp TTGTCTCTCTGCCTCTGCTCTGGCCCAAGTCACTGCTaGACCCGGAATCCATCCTCTCAGCAGCTCAGGCCA +
Preference number: 6 (lower is better)
Translates to: LSLCLCSGPSHC*TRNPSSQQLRP
Trigger: TGGCCTGAGCTGCTGAGAGGATGGATTCCGGGTTCAGCAGTGACTTGGGCCAGAGCAGAGGCAGAGAGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000554166.5
ENST00000555341.5
ENST00000556381.5
ENST00000627505.2
ENST00000627570.2
ENST00000629798.2
CDS TCA 72 bp CACTCTCCTTTCCCATGGTTGGCCCCTTCGCCTCGGTaGGCCTCCACTCGGATTCTTGGACTTCCACCTTCT +
Preference number: 6 (lower is better)
Translates to: HSPFPWLAPSPR*ASTRILGLPPS
Trigger: AGAAGGTGGAAGTCCAAGAATCCGAGTGGAGGCTCACCGAGGCGAAGGGGCCAACCATGGGAAAGGAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553664.1
ENST00000625811.1
CDS CCA 72 bp GCTGGCTTCCCCAACATTGTGCACCCTGGGCAGAGATaGACCTCTGTGATCCTCTGTAGCCAGGGCAATCCT +
Preference number: 6 (lower is better)
Translates to: AGFPNIVHPGQR*TSVILCSQGNP
Trigger: AGGATTGCCCTGGCTACAGAGGATCACAGAGGTCCATCTCTGCCCAGGGTGCACAATGTTGGGGAAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553350.5
ENST00000626435.2
CDS CAA 90 bp CAGCTCTGGCTGCCTCCAAAGCCCTGTGCCTTTAATGGCTTTGCTTaGCTTCCTGCTGCTCTAAGGTCCCCATCACTCTGCCCACTCCAC +
Preference number: 6 (lower is better)
Translates to: QLWLPPKPCAFNGFA*LPAALRSPSLCPLH
Trigger: GTGGAGTGGGCAGAGTGATGGGGACCTTAGAGCAGCAGGAAGCAAAGCAAAGCCATTAAAGGCACAGGGCTTTGGAGGCAGCCAGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557600.5
ENST00000629051.2
CDS CAA 90 bp GCTGTGACTGCTCCAATGACTCATCCGGGGTTGCATGGTTTGTACTaGGTGGAAGCTGAGAGTAGCCCCAGCTCTGGCTGCCTCCAAAGC +
Preference number: 6 (lower is better)
Translates to: AVTAPMTHPGLHGLY*VEAESSPSSGCLQS
Trigger: GCTTTGGAGGCAGCCAGAGCTGGGGCTACTCTCAGCTTCCACCAAGTACAAACCATGCAACCCCGGATGAGTCATTGGAGCAGTCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557600.5
ENST00000629051.2
CDS TCA 72 bp CCAACATTGTGCACCCTGGGCAGAGATGGACCTCTGTaGTCCTCTGTAGCCAGGGCAATCCTGTGGGATGGA +
Preference number: 6 (lower is better)
Translates to: PTLCTLGRDGPL*SSVARAILWDG
Trigger: TCCATCCCACAGGATTGCCCTGGCTACAGAGGATCACAGAGGTCCATCTCTGCCCAGGGTGCACAATGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553350.5
ENST00000626435.2
CDS TCA 72 bp CTGGCTCTGGTCATCCTGTCCAGAACACTCACCCACTaGCTGCAGAATAGCCACCAGACTGCCAGCAGCAAC +
Preference number: 6 (lower is better)
Translates to: LALVILSRTLTH*LQNSHQTASSN
Trigger: GTTGCTGCTGGCAGTCTGGTGGCTATTCTGCAGTCAGTGGGTGAGTGTTCTGGACAGGATGACCAGAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554562.1
ENST00000556381.5
ENST00000626801.1
ENST00000629798.2
CDS GCA 72 bp CTGGAAAGGGGTCCCAATCCAGACTCCAAGAGAGGGTaGTTGGACCTCACACAGGAAGAGTTACTGTGCGGG +
Preference number: 6 (lower is better)
Translates to: LERGPNPDSKRG*LDLTQEELLCG
Trigger: CCCGCACAGTAACTCTTCCTGTGTGAGGTCCAAGCACCCTCTCTTGGAGTCTGGATTGGGACCCCTTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557066.5
ENST00000627939.2
CDS GCA 72 bp CCCTGCTTTAGACGGGGAGGAATCCCGGGCTGTGACTaGTCCAATGACTCATCCGGGGTTGCATGGTTTGTA +
Preference number: 6 (lower is better)
Translates to: PCFRRGGIPGCD*SNDSSGVAWFV
Trigger: TACAAACCATGCAACCCCGGATGAGTCATTGGAGCAGTCACAGCCCGGGATTCCTCCCCGTCTAAAGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557600.5
ENST00000629051.2
CDS CAA 72 bp GAAAGGGGTCCCAATCCAGACTCCAAGAGAGGGTGCTaGGACCTCACACAGGAAGAGTTACTGTGCGGGAGC +
Preference number: 6 (lower is better)
Translates to: ERGPNPDSKRGC*DLTQEELLCGS
Trigger: GCTCCCGCACAGTAACTCTTCCTGTGTGAGGTCCAAGCACCCTCTCTTGGAGTCTGGATTGGGACCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557066.5
ENST00000627939.2
CDS CAA 72 bp GCTCCAATGACTCATCCGGGGTTGCATGGTTTGTACTaGGTGGAAGCTGAGAGTAGCCCCAGCTCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: APMTHPGLHGLY*VEAESSPSSGC
Trigger: GCAGCCAGAGCTGGGGCTACTCTCAGCTTCCACCAAGTACAAACCATGCAACCCCGGATGAGTCATTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557600.5
ENST00000629051.2
CDS CCA 72 bp ACCGCTACCCAGCTATGTCTTGGAGAATCCTGGGTTTaGTCAAAGCCAGTTTCTCCCAGAGGCTCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: TATQLCLGESWV*SKPVSPRGSGL
Trigger: CAGCCCTGAGCCTCTGGGAGAAACTGGCTTTGACCAAACCCAGGATTCTCCAAGACATAGCTGGGTAGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557600.5
ENST00000629051.2
CDS CAA 72 bp CACCGCTACCCAGCTATGTCTTGGAGAATCCTGGGTTaGGTCAAAGCCAGTTTCTCCCAGAGGCTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: HRYPAMSWRILG*VKASFSQRLRA
Trigger: AGCCCTGAGCCTCTGGGAGAAACTGGCTTTGACCAAACCCAGGATTCTCCAAGACATAGCTGGGTAGCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557600.5
ENST00000629051.2
CDS TCA 72 bp TCGGATTCTTGGACTTCCACGTTACTGTGCGGGAGCTaGCAAAGTCTCTCGCCGGAGGGAGCACACAGAATT +
Preference number: 6 (lower is better)
Translates to: SDSWTSTLLCGS*QSLSPEGAHRI
Trigger: AATTCTGTGTGCTCCCTCCGGCGAGAGACTTTGTCAGCTCCCGCACAGTAACGTGGAAGTCCAAGAATCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000553350.5
ENST00000554166.5
ENST00000555523.6
ENST00000556381.5
ENST00000557218.5
ENST00000557600.5
ENST00000626435.2
ENST00000627505.2
ENST00000628436.2
ENST00000629051.2
ENST00000629591.2
ENST00000629798.2
CDS TCA 72 bp TTGGACCTCACACAGGAAGAGTTACTGTGCGGGAGCTaGCAAAGTCTCTCGCCGGAGGGAGCACACAGAATT +
Preference number: 6 (lower is better)
Translates to: LDLTQEELLCGS*QSLSPEGAHRI
Trigger: AATTCTGTGTGCTCCCTCCGGCGAGAGACTTTGTCAGCTCCCGCACAGTAACTCTTCCTGTGTGAGGTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557066.5
ENST00000627939.2
CDS GCA 72 bp TACTTGGTGGAAGCTGAGAGTAGCCCCAGCTCTGGCTaGCTCCAAAGCCCTGTGCCTTTAATGGCTTTGCTT +
Preference number: 6 (lower is better)
Translates to: YLVEAESSPSSG*LQSPVPLMALL
Trigger: AAGCAAAGCCATTAAAGGCACAGGGCTTTGGAGGCAGCCAGAGCTGGGGCTACTCTCAGCTTCCACCAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557600.5
ENST00000629051.2
CDS CAA 72 bp GTGACTGCTCCAATGACTCATCCGGGGTTGCATGGTTaGTACTTGGTGGAAGCTGAGAGTAGCCCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: VTAPMTHPGLHG*YLVEAESSPSS
Trigger: AGAGCTGGGGCTACTCTCAGCTTCCACCAAGTACAAACCATGCAACCCCGGATGAGTCATTGGAGCAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557600.5
ENST00000629051.2
CDS CCA 72 bp GGCCCCTTCGCCTCGGTGAGCCTCCACTCGGATTCTTaGACTTCCACCTGTTGGTTGAGTTTTGACTTTATT +
Preference number: 6 (lower is better)
Translates to: GPFASVSLHSDS*TSTCWLSFDFI
Trigger: AATAAAGTCAAAACTCAACCAACAGGTGGAAGTCCAAGAATCCGAGTGGAGGCTCACCGAGGCGAAGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000393115.7
ENST00000554544.5
ENST00000555341.5
ENST00000557066.5
ENST00000611681.3
ENST00000627570.2
ENST00000627633.2
ENST00000627939.2
CDS CCA 72 bp TTTACCCCAAGTCCCTTCACATCATTGGTTAAGGGCTaGCTTCCCCAACATTGTGCACCCTGGGCAGAGATG +
Preference number: 6 (lower is better)
Translates to: FTPSPFTSLVKG*LPQHCAPWAEM
Trigger: CATCTCTGCCCAGGGTGCACAATGTTGGGGAAGCCAGCCCTTAACCAATGATGTGAAGGGACTTGGGGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553350.5
ENST00000626435.2
CDS TCA 72 bp GAGATTCAAAGGGAGGGGAAAGAAATTCCTACCTCTTaGTGGGAGGAGCTGTACAGCCATGCTGAAAGGGCG +
Preference number: 6 (lower is better)
Translates to: EIQREGKEIPTS*WEELYSHAERA
Trigger: CGCCCTTTCAGCATGGCTGTACAGCTCCTCCCATCAAGAGGTAGGAATTTCTTTCCCCTCCCTTTGAATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553350.5
ENST00000626435.2
CDS GCA 72 bp GTGAGCCTCCACTCGGATTCTTGGACTTCCACCTTCTaGATCTCGCATAGTAACGTAAGAAATGGATCCTGG +
Preference number: 6 (lower is better)
Translates to: VSLHSDSWTSTF*ISHSNVRNGSW
Trigger: CCAGGATCCATTTCTTACGTTACTATGCGAGATGCAGAAGGTGGAAGTCCAAGAATCCGAGTGGAGGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553664.1
ENST00000625811.1
CDS TCA 72 bp GTTTTGACTTTATTCAGGATGTTACTGTGCGGGAGCTaGCAAAGTCTCTCGCCGGAGGGAGCACACAGAATT +
Preference number: 6 (lower is better)
Translates to: VLTLFRMLLCGS*QSLSPEGAHRI
Trigger: AATTCTGTGTGCTCCCTCCGGCGAGAGACTTTGTCAGCTCCCGCACAGTAACATCCTGAATAAAGTCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554544.5
ENST00000555341.5
ENST00000627570.2
ENST00000627633.2
CDS CCA 72 bp CGTTTCTGTAATTTACCCCAAGTCCCTTCACATCATTaGTTAAGGGCTGGCTTCCCCAACATTGTGCACCCT +
Preference number: 6 (lower is better)
Translates to: RFCNLPQVPSHH*LRAGFPNIVHP
Trigger: AGGGTGCACAATGTTGGGGAAGCCAGCCCTTAACCAATGATGTGAAGGGACTTGGGGTAAATTACAGAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553350.5
ENST00000626435.2
CDS CCA 72 bp TTCTGCATCTCGCATAGTAACGTAAGAAATGGATCCTaGGACTCTGCTTCTGCTAGTTACTGTGCGGGAGCT +
Preference number: 6 (lower is better)
Translates to: FCISHSNVRNGS*DSASASYCAGA
Trigger: AGCTCCCGCACAGTAACTAGCAGAAGCAGAGTCCCAGGATCCATTTCTTACGTTACTATGCGAGATGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553664.1
ENST00000555065.5
ENST00000625811.1
ENST00000625947.2
CDS GCA 72 bp TCCAGCCTAGCCAACAGAGCAAAACACTCTCTCTTCTaGATCTCGCATAGTAACGTAAGAAATGGATCCTGG +
Preference number: 6 (lower is better)
Translates to: SSLANRAKHSLF*ISHSNVRNGSW
Trigger: CCAGGATCCATTTCTTACGTTACTATGCGAGATGCAGAAGAGAGAGTGTTTTGCTCTGTTGGCTAGGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555065.5
ENST00000625947.2
CDS CCA 72 bp ATATCGTCCTTTCATGGTTCACCAGGAGTATATTACTaGAAAGGGGTCCCAATCCAGACTCCAAGAGAGGGT +
Preference number: 6 (lower is better)
Translates to: ISSFHGSPGVYY*KGVPIQTPREG
Trigger: ACCCTCTCTTGGAGTCTGGATTGGGACCCCTTTCCAGTAATATACTCCTGGTGAACCATGAAAGGACGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557066.5
ENST00000627939.2
CDS TCA 72 bp ATGGGCTACCAGCATTTGTCAAATACTTTTGAGGAATaGGACACAGCTCAGCTGACATACTCCCTTCAAAAG +
Preference number: 6 (lower is better)
Translates to: MGYQHLSNTFEE*DTAQLTYSLQK
Trigger: CTTTTGAAGGGAGTATGTCAGCTGAGCTGTGTCTCATTCCTCAAAAGTATTTGACAAATGCTGGTAGCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557600.5
ENST00000629051.2
CDS TCA 72 bp TCTGTACTGTCTACTAGGGTAGCCACGTTTAGCACTTaGAATGTGGTGCAGGTGACAGAGAAACATTATGAT +
Preference number: 6 (lower is better)
Translates to: SVLSTRVATFST*NVVQVTEKHYD
Trigger: ATCATAATGTTTCTCTGTCACCTGCACCACATTTCAAGTGCTAAACGTGGCTACCCTAGTAGACAGTACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557600.5
ENST00000629051.2
CDS CCA 72 bp CACTGCTTTATAGCAGGTCAAAAGCTTCTGACTCAGTaGATGGGCTACCAGCATTTGTCAAATACTTTTGAG +
Preference number: 6 (lower is better)
Translates to: HCFIAGQKLLTQ*MGYQHLSNTFE
Trigger: CTCAAAAGTATTTGACAAATGCTGGTAGCCCATCCACTGAGTCAGAAGCTTTTGACCTGCTATAAAGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557600.5
ENST00000629051.2