RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IFFO2 (Homo sapiens)

Ensembl gene IDs: ENSG00000169991

Ensembl transcript IDs: ENST00000355609.8, ENST00000416166.1, ENST00000455833.7

Found 381 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAAGCGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCCTCATaGCCAACCTCGGCCAAACCCACACTACCCAGTCAGTGCTGCCAC +
Preference number: 1 (lower is better)
Translates to: ASGQGGQCLAGTPAS*PTSAKPTLPSQCCH
Trigger: GTGGCAGCACTGACTGGGTAGTGTGGGTTTGGCCGAGGTTGGTCATGAGGCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCGCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 90 bp CCCAGAGGTCCGGAAGGAAGCAAGCGGTCAGGGAGGCCAGTGCCTTaGGGGAACCCCAGCCTCATGACCAACCTCGGCCAAACCCACACT +
Preference number: 1 (lower is better)
Translates to: PRGPEGSKRSGRPVP*GNPSLMTNLGQTHT
Trigger: AGTGTGGGTTTGGCCGAGGTTGGTCATGAGGCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCGCTTGCTTCCTTCCGGACCTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 90 bp TCCTTCCTGGGGGTTGGCAGAGCACCCCAAGCTCCAGGCCGAGTCTaGGCTGGCTCAGGAGGAAGGGAGGGCATAGCCCATGGCCAATCA +
Preference number: 1 (lower is better)
Translates to: SFLGVGRAPQAPGRV*AGSGGREGIAHGQS
Trigger: TGATTGGCCATGGGCTATGCCCTCCCTTCCTCCTGAGCCAGCCCAGACTCGGCCTGGAGCTTGGGGTGCTCTGCCAACCCCCAGGAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 90 bp CCGGCTTCCACGCTGCCCACGAAACTCCCATACCACATTGTCCAATaGCTCCCTCGGCCCTGGACGGAGGAGACCCACGAGGGTGGATGT +
Preference number: 1 (lower is better)
Translates to: PASTLPTKLPYHIVQ*LPRPWTEETHEGGC
Trigger: ACATCCACCCTCGTGGGTCTCCTCCGTCCAGGGCCGAGGGAGGCATTGGACAATGTGGTATGGGAGTTTCGTGGGCAGCGTGGAAGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 90 bp ACCCTCCCACCACCTTGGGGAACAACCCAGGGCCGGCTTCCACGCTaGCCACGAAACTCCCATACCACATTGTCCAATGCCTCCCTCGGC +
Preference number: 1 (lower is better)
Translates to: TLPPPWGTTQGRLPR*PRNSHTTLSNASLG
Trigger: GCCGAGGGAGGCATTGGACAATGTGGTATGGGAGTTTCGTGGGCAGCGTGGAAGCCGGCCCTGGGTTGTTCCCCAAGGTGGTGGGAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 90 bp ACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTaGTGTGGAAGGAAGGAAGGAAGCAGCAGTCCCTCAGGGCCTCCA +
Preference number: 1 (lower is better)
Translates to: TIPWVGGGWRRGTRW*CGRKEGSSSPSGPP
Trigger: TGGAGGCCCTGAGGGACTGCTGCTTCCTTCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
3UTR GCA 90 bp CACAGCCGGGGCTGGGCTATGAGCATCTTAAGCCATTTCCACTTCTaGTCCAGCTGCCTGACCACCTGGGACCCGCAAAGGCCCAGGCTC +
Preference number: 1 (lower is better)
Translates to: HSRGWAMSILSHFHF*SSCLTTWDPQRPRL
Trigger: GAGCCTGGGCCTTTGCGGGTCCCAGGTGGTCAGGCAGCTGGAGCAGAAGTGGAAATGGCTTAAGATGCTCATAGCCCAGCCCCGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 90 bp CCCACGAAACTCCCATACCACATTGTCCAATGCCTCCCTCGGCCCTaGACGGAGGAGACCCACGAGGGTGGATGTTTTCCTGCCCTCGAG +
Preference number: 1 (lower is better)
Translates to: PTKLPYHIVQCLPRP*TEETHEGGCFPALE
Trigger: CTCGAGGGCAGGAAAACATCCACCCTCGTGGGTCTCCTCCGTCCAGGGCCGAGGGAGGCATTGGACAATGTGGTATGGGAGTTTCGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 90 bp ATCAATACCCCGACTGGCCAGTCGAGGGAACTGCTGAGAGCGGCTTaGGTGTGTCGAGGAGCAGAAAGAGGATGGCCCTCACTCCAGCTC +
Preference number: 1 (lower is better)
Translates to: INTPTGQSRELLRAA*VCRGAERGWPSLQL
Trigger: GAGCTGGAGTGAGGGCCATCCTCTTTCTGCTCCTCGACACACGCAAGCCGCTCTCAGCAGTTCCCTCGACTGGCCAGTCGGGGTATTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 90 bp CCCAGGCTCCAAGGAAGTCGTGTGCTCCCACTGTCACCCATGCTCTaGTGCCTCCCAACCCTCTCCCAACGCAACTGGGTTGGAAATGGA +
Preference number: 1 (lower is better)
Translates to: PRLQGSRVLPLSPML*CLPTLSQRNWVGNG
Trigger: TCCATTTCCAACCCAGTTGCGTTGGGAGAGGGTTGGGAGGCAGCAGAGCATGGGTGACAGTGGGAGCACACGACTTCCTTGGAGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 90 bp AAAGGCCCAGGCTCCAAGGAAGTCGTGTGCTCCCACTGTCACCCATaGTCTGCTGCCTCCCAACCCTCTCCCAACGCAACTGGGTTGGAA +
Preference number: 1 (lower is better)
Translates to: KGPGSKEVVCSHCHP*SAASQPSPNATGLE
Trigger: TTCCAACCCAGTTGCGTTGGGAGAGGGTTGGGAGGCAGCAGAGCATGGGTGACAGTGGGAGCACACGACTTCCTTGGAGCCTGGGCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 90 bp GCCATTCAAGTCTTGGGGGATGCTGGCTCAGATCAATACCCCGACTaGCCAGTCGAGGGAACTGCTGAGAGCGGCTTGCGTGTGTCGAGG +
Preference number: 1 (lower is better)
Translates to: AIQVLGDAGSDQYPD*PVEGTAESGLRVSR
Trigger: CCTCGACACACGCAAGCCGCTCTCAGCAGTTCCCTCGACTGGCCAGTCGGGGTATTGATCTGAGCCAGCATCCCCCAAGACTTGAATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR TCA 90 bp AACATCAAGTTATCAGGGAAATCAAGGATCCCTCCGCCCCCGCCCTaGACCCAGAGGTCCGGAAGGAAGCAAGCGGTCAGGGAGGCCAGT +
Preference number: 1 (lower is better)
Translates to: NIKLSGKSRIPPPPP*TQRSGRKQAVREAS
Trigger: ACTGGCCTCCCTGACCGCTTGCTTCCTTCCGGACCTCTGGGTTCAGGGCGGGGGCGGAGGGATCCTTGATTTCCCTGATAACTTGATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR TCA 90 bp TGTGGGCTCATGGTGAGGGGACAAGCAGGGCCCACTGACATTAACTaGAAAAAGCATGTGGTGGAGAGGCAGGCAGGCAGGCAGGCAGGC +
Preference number: 1 (lower is better)
Translates to: CGLMVRGQAGPTDIN*KKHVVERQAGRQAG
Trigger: GCCTGCCTGCCTGCCTGCCTGCCTCTCCACCACATGCTTTTTTCAGTTAATGTCAGTGGGCCCTGCTTGTCCCCTCACCATGAGCCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 90 bp AAGGACTGCAGCCCAGGCTTGGCCTGGAGTAGACACAGCCGGGGCTaGGCTATGAGCATCTTAAGCCATTTCCACTTCTGCTCCAGCTGC +
Preference number: 1 (lower is better)
Translates to: KDCSPGLAWSRHSRG*AMSILSHFHFCSSC
Trigger: GCAGCTGGAGCAGAAGTGGAAATGGCTTAAGATGCTCATAGCCCAGCCCCGGCTGTGTCTACTCCAGGCCAAGCCTGGGCTGCAGTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 90 bp CTGCTCAGCTGGCTCCAAGCTGAGATTTGGAAGGGGGCCACACAGTaGCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTTGGGGGA +
Preference number: 1 (lower is better)
Translates to: LLSWLQAEIWKGATQ*PSTQSHSSHSSLGG
Trigger: TCCCCCAAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTGGCCCCCTTCCAAATCTCAGCTTGGAGCCAGCTGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 90 bp AGGCTCCAAGGAAGTCGTGTGCTCCCACTGTCACCCATGCTCTGCTaGCTCCCAACCCTCTCCCAACGCAACTGGGTTGGAAATGGATCT +
Preference number: 1 (lower is better)
Translates to: RLQGSRVLPLSPMLC*LPTLSQRNWVGNGS
Trigger: AGATCCATTTCCAACCCAGTTGCGTTGGGAGAGGGTTGGGAGGCAGCAGAGCATGGGTGACAGTGGGAGCACACGACTTCCTTGGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 90 bp CCCTTCCCTGTGATGCTAGACCCAGCTGGCAGACAACAGCAACGGTaGGGCAGGATCATGGGGTATAAAGTCTCCCTGGGTGGGGCTAAA +
Preference number: 1 (lower is better)
Translates to: PFPVMLDPAGRQQQR*GRIMGYKVSLGGAK
Trigger: TTTAGCCCCACCCAGGGAGACTTTATACCCCATGATCCTGCCCCACCGTTGCTGTTGTCTGCCAGCTGGGTCTAGCATCACAGGGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 90 bp AGGAGGCAGGCCCATCACACTCTGGCTTTCCCTCTCCTACCCACCTaGCCCAAGTCCTCACTCCCAAGAGGAGAGCAGATATTAAAAGCC +
Preference number: 1 (lower is better)
Translates to: RRQAHHTLAFPLLPT*PKSSLPRGEQILKA
Trigger: GGCTTTTAATATCTGCTCTCCTCTTGGGAGTGAGGACTTGGGGCAGGTGGGTAGGAGAGGGAAAGCCAGAGTGTGATGGGCCTGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 90 bp TCCTTCTGCCTCCAGGCAAGGCAGAGGGACCCAAGTTCTAGTCCTTaGGCACATTTTGCTACCTTGACCACTAGAGGGAGCTCCTGGGAC +
Preference number: 1 (lower is better)
Translates to: SFCLQARQRDPSSSP*AHFATLTTRGSSWD
Trigger: GTCCCAGGAGCTCCCTCTAGTGGTCAAGGTAGCAAAATGTGCCCAAGGACTAGAACTTGGGTCCCTCTGCCTTGCCTGGAGGCAGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 90 bp AGAACAATAGAAATTGACAGCACCATTCCTTGGGTGGGTGGGGGATaGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGAAGGAAGC +
Preference number: 1 (lower is better)
Translates to: RTIEIDSTIPWVGGG*RRGTRWWCGRKEGS
Trigger: GCTTCCTTCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGCTGTCAATTTCTATTGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355609.8
ENST00000455833.7
3UTR TCA 90 bp ACCTACACTCTGCTGAAGCTGCTCATGGGTGTGGATGACCAAAAGTaGGGACAGAAGACGAGGCCGGGGGACAGGAATGGGTTCCATTCA +
Preference number: 1 (lower is better)
Translates to: TYTLLKLLMGVDDQK*GQKTRPGDRNGFHS
Trigger: TGAATGGAACCCATTCCTGTCCCCCGGCCTCGTCTTCTGTCCTCACTTTTGGTCATCCACACCCATGAGCAGCTTCAGCAGAGTGTAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 90 bp GAGGCCGGGGGACAGGAATGGGTTCCATTCAATCCAGCAACAACATaGACCATGTCTCGTCCACAGGAAAATGCTGGGCTACCACAACTG +
Preference number: 1 (lower is better)
Translates to: EAGGQEWVPFNPATT*TMSRPQENAGLPQL
Trigger: CAGTTGTGGTAGCCCAGCATTTTCCTGTGGACGAGACATGGTGCATGTTGTTGCTGGATTGAATGGAACCCATTCCTGTCCCCCGGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 90 bp CTGTCACCCATGCTCTGCTGCCTCCCAACCCTCTCCCAACGCAACTaGGTTGGAAATGGATCTCGGCAGACCAGAGTCAGAGTAACTAAT +
Preference number: 1 (lower is better)
Translates to: LSPMLCCLPTLSQRN*VGNGSRQTRVRVTN
Trigger: ATTAGTTACTCTGACTCTGGTCTGCCGAGATCCATTTCCAACCCAGTTGCGTTGGGAGAGGGTTGGGAGGCAGCAGAGCATGGGTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR TCA 90 bp CTCCAAGTACCTGTCAAAGGGAACTGTTTGGCTAACAAGAGATGCTaGCTATGGAAGTGTCACAGCCAGACTGCCACAGGGGACCCGTGG +
Preference number: 1 (lower is better)
Translates to: LQVPVKGNCLANKRC*LWKCHSQTATGDPW
Trigger: CCACGGGTCCCCTGTGGCAGTCTGGCTGTGACACTTCCATAGTCAGCATCTCTTGTTAGCCAAACAGTTCCCTTTGACAGGTACTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 90 bp GACAGTCCTAACCCAAGGCGGGTAGAAGGGAGCAGAGACCAGGCCTaGCCCCTTCAGACTTTCTCACAGAGAAATTACAGATCTCTAAGC +
Preference number: 1 (lower is better)
Translates to: DSPNPRRVEGSRDQA*PLQTFSQRNYRSLS
Trigger: GCTTAGAGATCTGTAATTTCTCTGTGAGAAAGTCTGAAGGGGCCAGGCCTGGTCTCTGCTCCCTTCTACCCGCCTTGGGTTAGGACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 90 bp ATAATAATAAAGCAAAGCCTGCTCAGCTGGCTCCAAGCTGAGATTTaGAAGGGGGCCACACAGTGCCCTTCAACGCAGTCCCACTCAAGC +
Preference number: 1 (lower is better)
Translates to: IIIKQSLLSWLQAEI*KGATQCPSTQSHSS
Trigger: GCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTGGCCCCCTTCCAAATCTCAGCTTGGAGCCAGCTGAGCAGGCTTTGCTTTATTATTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 90 bp AAGGGGTCTTGCAGGGAAGGGCTTTGCCTCATTTCTTTGAGGGCTTaGGAGGGAAGGGTCTTGGTGAGGGATTTGCTCAGAACTAACACA +
Preference number: 1 (lower is better)
Translates to: KGSCREGLCLISLRA*EGRVLVRDLLRTNT
Trigger: TGTGTTAGTTCTGAGCAAATCCCTCACCAAGACCCTTCCCTCCCAAGCCCTCAAAGAAATGAGGCAAAGCCCTTCCCTGCAAGACCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 90 bp CAGACTTTCTCACAGAGAAATTACAGATCTCTAAGCCTCTATTGTTaGCTGGCGAGGGAGGGAAGAACATCAAGTTATCAGGGAAATCAA +
Preference number: 1 (lower is better)
Translates to: QTFSQRNYRSLSLYC*LAREGRTSSYQGNQ
Trigger: TTGATTTCCCTGATAACTTGATGTTCTTCCCTCCCTCGCCAGCCAACAATAGAGGCTTAGAGATCTGTAATTTCTCTGTGAGAAAGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CCA 90 bp CGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCCTCATGACCAACCTCGGCCATTCCTTGGGTGGGTaGGGGATGGAGACGGGGCAC +
Preference number: 2 (lower is better)
Translates to: RSGRPVPCGNPSLMTNLGHSLGG*GMETGH
Trigger: GTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATG...GCCGAGGTTGGTCATGAGGCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CCA 90 bp GAGAGGCAGGCAGGCAGGCAGGCAGGCCGGACCCAGGAACCAGCCCAGGAGGCAGGAGCAGAAAGAGGATaGCCCTCACTCCAGCTCCTG +
Preference number: 2 (lower is better)
Translates to: ERQAGRQAGRTQEPAQEAGAERG*PSLQLL
Trigger: CAGGAGCTGGAGTGAGGGCCATCCTCTTTCTGCTCC...TGCCTCCTGGGCTGGTTCCTGGGTCCGGCCTGCCTGCCTGCCTGCCTGCCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CAA 90 bp ACCCAGGGCCGGCTTCCACGCTGCCCACGAAACTCCCATACCACATaGTCCAATGCCTCCCTCGGCCCTGGACGGAGGAGACCCACGAGG +
Preference number: 2 (lower is better)
Translates to: TQGRLPRCPRNSHTT*SNASLGPGRRRPTR
Trigger: CCTCGTGGGTCTCCTCCGTCCAGGGCCGAGGGAGGCATTGGACAATGTGGTATGGGAGTTTCGTGGGCAGCGTGGAAGCCGGCCCTGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR GCA 90 bp GAGAGGCAGGCAGGCAGGCAGGCAGGCCGGACCCAGGAACCAGCCCAGGAGGCAGCCTTCCCCTCACAGTaGCTTGTCCCTTCAACTTTG +
Preference number: 2 (lower is better)
Translates to: ERQAGRQAGRTQEPAQEAAFPSQ*LVPSTL
Trigger: CAAAGTTGAAGGGACAAGGCACTGTGAGGGGAAGGC...TGCCTCCTGGGCTGGTTCCTGGGTCCGGCCTGCCTGCCTGCCTGCCTGCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR TCA 90 bp AAGGGGGCCACACAGTGCCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTTCCTCCGCCCCCGCCCTaGACCCAGAGGTCCGGAAGG +
Preference number: 2 (lower is better)
Translates to: KGATQCPSTQSHSSHSSLPPPPP*TQRSGR
Trigger: CCTTCCGGACCTCTGGGTTCAGGGCGGGGGCGGAGG...AAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTGGCCCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CCA 90 bp AGGCAGGCCGGACCCAGGAACCAGCCCAGGAGGCAGGCCCATCACACTCTGGCTAAAGTCTGTGTGGTGTaGCTTCGAACCCCACTCCGA +
Preference number: 2 (lower is better)
Translates to: RQAGPRNQPRRQAHHTLAKVCVV*LRTPLR
Trigger: TCGGAGTGGGGTTCGAAGCCACACCACACAGACTTT...AGCCAGAGTGTGATGGGCCTGCCTCCTGGGCTGGTTCCTGGGTCCGGCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CCA 90 bp GCAGCCAAAAGCAGGCAACTGCCGGACAGTCCTAACCCAAGGCGGGTAGAAGGGGCACCATTCCTTGGGTaGGTGGGGGATGGAGACGGG +
Preference number: 2 (lower is better)
Translates to: AAKSRQLPDSPNPRRVEGAPFLG*VGDGDG
Trigger: CCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGC...CCCTTCTACCCGCCTTGGGTTAGGACTGTCCGGCAGTTGCCTGCTTTTGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CCA 90 bp GCAGCCAAAAGCAGGCAACTGCCGGACAGTCCTAACCCAAGGCGGGTAGAAGGGTACACCACGGCCGGTTaGCCCGGCCCTCAGCTTAGA +
Preference number: 2 (lower is better)
Translates to: AAKSRQLPDSPNPRRVEGYTTAG*PGPQLR
Trigger: TCTAAGCTGAGGGCCGGGCCAACCGGCCGTGGTGTA...CCCTTCTACCCGCCTTGGGTTAGGACTGTCCGGCAGTTGCCTGCTTTTGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CCA 90 bp CACACAGTGCCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTTGGGGGATGTGGGTGGGTGGGGGATaGAGACGGGGCACCCGTTGG +
Preference number: 2 (lower is better)
Translates to: HTVPFNAVPLKPFKSWGMWVGGG*RRGTRW
Trigger: CCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCA...CATCCCCCAAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CAA 90 bp GATCAATACCCCGACTGGCCAGTCGAGGGAACTGCTGAGAGCGGCTaGCGTGTGTCGAGGAGCAGAAAGAGGATGGCCCTCACTCCAGCT +
Preference number: 2 (lower is better)
Translates to: DQYPDWPVEGTAESG*RVSRSRKRMALTPA
Trigger: AGCTGGAGTGAGGGCCATCCTCTTTCTGCTCCTCGACACACGCAAGCCGCTCTCAGCAGTTCCCTCGACTGGCCAGTCGGGGTATTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR TCA 90 bp AGGCCCAGGCTCCAAGGAAGTCGTGTGCTCCCACTGTCACCCATGCTCTGCTGCCTCTCCTTCAGGGAGTaGGAAAATTGGGGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: RPRLQGSRVLPLSPMLCCLSFRE*ENWGGP
Trigger: GGGACCACCCCAATTTTCTCACTCCCTGAAGGAGAG...GCAGCAGAGCATGGGTGACAGTGGGAGCACACGACTTCCTTGGAGCCTGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CCA 90 bp GGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGAAGGAAGCAGAGAAAGTCTGTGTaGTGTGGCTTCGAACCCCAC +
Preference number: 2 (lower is better)
Translates to: GWGMETGHPLVVWKEGRKQRKSV*CGFEPH
Trigger: GTGGGGTTCGAAGCCACACCACACAGACTTTCTCTG...CTTCCTTCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
3UTR-3UTR CCA 90 bp CGGGGGACAGGAATGGGTTCCATTCAATCCAGCAACAACATGCACCATGTCTCGCAAGCGGCTCCTTCCTaGGGGTTGGCAGAGCACCCC +
Preference number: 2 (lower is better)
Translates to: RGTGMGSIQSSNNMHHVSQAAPS*GLAEHP
Trigger: GGGGTGCTCTGCCAACCCCCAGGAAGGAGCCGCTTG...CGAGACATGGTGCATGTTGTTGCTGGATTGAATGGAACCCATTCCTGTCCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CCA 90 bp CAGGCTCCAAGGAAGTCGTGTGCTCCCACTGTCACCCATGCTCTGCTGCCTCCCGCCTCTATTGTTGGCTaGCGAGGGAGGGAAGAACAT +
Preference number: 2 (lower is better)
Translates to: QAPRKSCAPTVTHALLPPASIVG*RGREEH
Trigger: ATGTTCTTCCCTCCCTCGCCAGCCAACAATAGAGGC...GGGAGGCAGCAGAGCATGGGTGACAGTGGGAGCACACGACTTCCTTGGAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CAA 90 bp CCACACAGTGCCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTaGGGGGATGCTGGCTCAGATCAATACCCCGACTGGCCAGTCGAG +
Preference number: 2 (lower is better)
Translates to: PHSALQRSPTQAIQV*GDAGSDQYPDWPVE
Trigger: CTCGACTGGCCAGTCGGGGTATTGATCTGAGCCAGCATCCCCCAAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR GCA 90 bp GCAACAACATGCACCATGTCTCGTCCACAGGAAAATGCTGGGCTACCACAACTGGGGAGGCCAGTGCCTTaGGGGAACCCCAGCCTCATG +
Preference number: 2 (lower is better)
Translates to: ATTCTMSRPQENAGLPQLGRPVP*GNPSLM
Trigger: CATGAGGCTGGGGTTCCCGCAAGGCACTGGCCTCCC...CAGTTGTGGTAGCCCAGCATTTTCCTGTGGACGAGACATGGTGCATGTTGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CCA 90 bp GTCGAGGGAACTGCTGAGAGCGGCTTGCGTGTGTCGAGGAGCAGAAAGAGGATGAGCAGAGACCAGGCCTaGCCCCTTCAGACTTTCTCA +
Preference number: 2 (lower is better)
Translates to: VEGTAESGLRVSRSRKRMSRDQA*PLQTFS
Trigger: TGAGAAAGTCTGAAGGGGCCAGGCCTGGTCTCTGCT...CATCCTCTTTCTGCTCCTCGACACACGCAAGCCGCTCTCAGCAGTTCCCTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CCA 90 bp CGGGGGACAGGAATGGGTTCCATTCAATCCAGCAACAACATGCACCATGTCTCGCGGGGCACCCGTTGGTaGTGTGGAAGGAAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: RGTGMGSIQSSNNMHHVSRGTRW*CGRKEG
Trigger: TCCTTCCTTCCTTCCACACCACCAACGGGTGCCCCG...CGAGACATGGTGCATGTTGTTGCTGGATTGAATGGAACCCATTCCTGTCCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CCA 90 bp CCAGGGAGCCAAAAGGATGCTAGTCTTCCTATCCCTCCCCAATCCTCTGTTTGTCTCCTTCCTGGGGGTTaGCAGAGCACCCCAAGCTCC +
Preference number: 2 (lower is better)
Translates to: PGSQKDASLPIPPQSSVCLLPGG*QSTPSS
Trigger: GGAGCTTGGGGTGCTCTGCCAACCCCCAGGAAGGAG...ACAAACAGAGGATTGGGGAGGGATAGGAAGACTAGCATCCTTTTGGCTCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CCA 90 bp GCAGCCAAAAGCAGGCAACTGCCGGACAGTCCTAACCCAAGGCGGGTAGAAGGGCTTTGGAGCTCAAAGTaGCTCAGCTTAAGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: AAKSRQLPDSPNPRRVEGLWSSK*LSLREK
Trigger: CTTCTCCCTTAAGCTGAGCCACTTTGAGCTCCAAAG...CCCTTCTACCCGCCTTGGGTTAGGACTGTCCGGCAGTTGCCTGCTTTTGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR GCA 90 bp TGCAAAAACATCCACAAGGGGTCTTGCAGGGAAGGGCTTTGCCTCATTTCTTTGAAGGGGGCCACACAGTaGCCTTCAACGCAGTCCCAC +
Preference number: 2 (lower is better)
Translates to: CKNIHKGSCREGLCLISLKGATQ*PSTQSH
Trigger: GTGGGACTGCGTTGAAGGGCACTGTGTGGCCCCCTT...CAAAGAAATGAGGCAAAGCCCTTCCCTGCAAGACCCCTTGTGGATGTTTTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CCA 90 bp GCAGCCAAAAGCAGGCAACTGCCGGACAGTCCTAACCCAAGGCGGGTAGAAGGGCTAGGAATAATTCTTTaGAGCTCAAAGTGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: AAKSRQLPDSPNPRRVEGLGIIL*SSKWLS
Trigger: GCTGAGCCACTTTGAGCTCCAAAGAATTATTCCTAG...CCCTTCTACCCGCCTTGGGTTAGGACTGTCCGGCAGTTGCCTGCTTTTGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR TCA 90 bp AGTAGACACAGCCGGGGCTGGGCTATGAGCATCTTAAGCCATTTCCACTTCTGCGCTCATGGGTGTGGATaGCCAAAAGTGAGGACAGAA +
Preference number: 2 (lower is better)
Translates to: SRHSRGWAMSILSHFHFCAHGCG*PKVRTE
Trigger: TTCTGTCCTCACTTTTGGTCATCCACACCCATGAGC...GCAGAAGTGGAAATGGCTTAAGATGCTCATAGCCCAGCCCCGGCTGTGTCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR GCA 90 bp AGTAGACACAGCCGGGGCTGGGCTATGAGCATCTTAAGCCATTTCCACTTCTGCTCAAGTCTTGGGGGATaGTGGCTCAGATCAATACCC +
Preference number: 2 (lower is better)
Translates to: SRHSRGWAMSILSHFHFCSSLGG*WLRSIP
Trigger: GGGTATTGATCTGAGCCAGCATCCCCCAAGACTTGA...GCAGAAGTGGAAATGGCTTAAGATGCTCATAGCCCAGCCCCGGCTGTGTCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CCA 90 bp CCAGGGAGCCAAAAGGATGCTAGTCTTCCTATCCCTCCCCAATCCTCTGTTTGTAGTCTTGGGGGATGCTaGCTCAGATCAATACCCCGA +
Preference number: 2 (lower is better)
Translates to: PGSQKDASLPIPPQSSVCSLGGC*LRSIPR
Trigger: TCGGGGTATTGATCTGAGCCAGCATCCCCCAAGACT...ACAAACAGAGGATTGGGGAGGGATAGGAAGACTAGCATCCTTTTGGCTCCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CCA 90 bp TGGAGAACAATAGAAATTGACAGCACCATTCCTTGGGTGGGTGGGGGATGGAGAAAAGTCTGTGTGGTGTaGCTTCGAACCCCACTCCGA +
Preference number: 2 (lower is better)
Translates to: WRTIEIDSTIPWVGGGWRKVCVV*LRTPLR
Trigger: TCGGAGTGGGGTTCGAAGCCACACCACACAGACTTT...TCTCCATCCCCCACCCACCCAAGGAATGGTGCTGTCAATTTCTATTGTTCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355609.8
ENST00000455833.7
3UTR-3UTR CCA 90 bp TGCAAAAACATCCACAAGGGGTCTTGCAGGGAAGGGCTTTGCCTCATTTCTTTGGCCGGGGGACAGGAATaGGTTCCATTCAATCCAGCA +
Preference number: 2 (lower is better)
Translates to: CKNIHKGSCREGLCLISLAGGQE*VPFNPA
Trigger: TGCTGGATTGAATGGAACCCATTCCTGTCCCCCGGC...CAAAGAAATGAGGCAAAGCCCTTCCCTGCAAGACCCCTTGTGGATGTTTTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR GCA 90 bp TGCAAAAACATCCACAAGGGGTCTTGCAGGGAAGGGCTTTGCCTCATTTCTTTGACACTACCCAGTCAGTaGTGCCACACAGATCACCCT +
Preference number: 2 (lower is better)
Translates to: CKNIHKGSCREGLCLISLTLPSQ*CHTDHP
Trigger: AGGGTGATCTGTGTGGCAGCACTGACTGGGTAGTGT...CAAAGAAATGAGGCAAAGCCCTTCCCTGCAAGACCCCTTGTGGATGTTTTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CCA 90 bp CTGCAGTTTTCAAACTCCCTAGAGTACCCTAGTCCTCAAAGACAAATGACCTATAAGGCCACGGACCCCTaGGGACCACAATCCCAGTCA +
Preference number: 2 (lower is better)
Translates to: LQFSNSLEYPSPQRQMTYKATDP*GPQSQS
Trigger: TGACTGGGATTGTGGTCCCCAGGGGTCCGTGGCCTT...ATAGGTCATTTGTCTTTGAGGACTAGGGTACTCTAGGGAGTTTGAAAACTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR TCA 90 bp CCAGGGAGCCAAAAGGATGCTAGTCTTCCTATCCCTCCCCAATCCTCTGTTTGTTCCTGCCTTCCACAATaGTATAAGGCAAGCTGCTTT +
Preference number: 2 (lower is better)
Translates to: PGSQKDASLPIPPQSSVCSCLPQ*YKASCF
Trigger: AAAGCAGCTTGCCTTATATCATTGTGGAAGGCAGGA...ACAAACAGAGGATTGGGGAGGGATAGGAAGACTAGCATCCTTTTGGCTCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR GCA 90 bp CTGCAGTTTTCAAACTCCCTAGAGTACCCTAGTCCTCAAAGACAAATGACCTATCTACCCAGTCAGTGCTaGCACACAGATCACCCTAAC +
Preference number: 2 (lower is better)
Translates to: LQFSNSLEYPSPQRQMTYLPSQC*HTDHPN
Trigger: GTTAGGGTGATCTGTGTGGCAGCACTGACTGGGTAG...ATAGGTCATTTGTCTTTGAGGACTAGGGTACTCTAGGGAGTTTGAAAACTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CAA 90 bp CCTTCAGACTTTCTCACAGAGAAATTACAGATCTCTAAGCCTCTATaGTTGGCTGGCGAGGGAGGGAAGAACATCAAGTTATCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: PSDFLTEKLQISKPL*LAGEGGKNIKLSGK
Trigger: TTTCCCTGATAACTTGATGTTCTTCCCTCCCTCGCCAGCCAACAATAGAGGCTTAGAGATCTGTAATTTCTCTGTGAGAAAGTCTGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CAA 90 bp TCAGACTTTCTCACAGAGAAATTACAGATCTCTAAGCCTCTATTGTaGGCTGGCGAGGGAGGGAAGAACATCAAGTTATCAGGGAAATCA +
Preference number: 2 (lower is better)
Translates to: SDFLTEKLQISKPLL*AGEGGKNIKLSGKS
Trigger: TGATTTCCCTGATAACTTGATGTTCTTCCCTCCCTCGCCAGCCAACAATAGAGGCTTAGAGATCTGTAATTTCTCTGTGAGAAAGTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR GCA 90 bp CTGCAGTTTTCAAACTCCCTAGAGTACCCTAGTCCTCAAAGACAAATGACCTATGTCCGCACAGAAGTCTaGATTTGTAATGTGGAGAAC +
Preference number: 2 (lower is better)
Translates to: LQFSNSLEYPSPQRQMTYVRTEV*ICNVEN
Trigger: GTTCTCCACATTACAAATGCAGACTTCTGTGCGGAC...ATAGGTCATTTGTCTTTGAGGACTAGGGTACTCTAGGGAGTTTGAAAACTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CAA 90 bp CTCAGCTTAGAGTTCTGTATAAAAACACCTGCTAGGAATAATTCTTaGGAGCTCAAAGTGGCTCAGCTTAAGGGAGAAGGCACAGTTAAC +
Preference number: 2 (lower is better)
Translates to: LSLEFCIKTPARNNS*ELKVAQLKGEGTVN
Trigger: GTTAACTGTGCCTTCTCCCTTAAGCTGAGCCACTTTGAGCTCCAAAGAATTATTCCTAGCAGGTGTTTTTATACAGAACTCTAAGCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CAA 90 bp ACAGGATATAAAGGGCATGATATTTACAACAGTACAGTAAACAGGTaGGTTTCCGGTAGGATCAGTAGTCTTTCCATGAGTATAAATCCC +
Preference number: 2 (lower is better)
Translates to: TGYKGHDIYNSTVNR*VSGRISSLSMSINP
Trigger: GGGATTTATACTCATGGAAAGACTACTGATCCTACCGGAAACCAACCTGTTTACTGTACTGTTGTAAATATCATGCCCTTTATATCCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR TCA 72 bp CAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCCTCATaGCCAACCTCGGCCAAACCCACACTACCCAGTCAG +
Preference number: 3 (lower is better)
Translates to: QGGQCLAGTPAS*PTSAKPTLPSQ
Trigger: CTGACTGGGTAGTGTGGGTTTGGCCGAGGTTGGTCATGAGGCTGGGGTTCCCGCAAGGCACTGGCCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 72 bp GGGACCCGCAAAGGCCCAGGCTCCAAGGAAGTCGTGTaGTCCCACTGTCACCCATGCTCTGCTGCCTCCCAA +
Preference number: 3 (lower is better)
Translates to: GTRKGPGSKEVV*SHCHPCSAASQ
Trigger: TTGGGAGGCAGCAGAGCATGGGTGACAGTGGGAGCACACGACTTCCTTGGAGCCTGGGCCTTTGCGGGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CAA 90 bp CAGCTAGGACTGGTGCTGCCCCAGCGAGCGTTGGGGTCTTTCTTGGCAAGCTGTGCTCCTTCCTGGGGGTaGGCAGAGCACCCCAAGCTC +
Preference number: 3 (lower is better)
Translates to: QLGLVLPQRALGSFLASCAPSWG*AEHPKL
Trigger: GAGCTTGGGGTGCTCTGCCAACCCCCAGGAAGGAGC...ACAGCTTGCCAAGAAAGACCCCAACGCTCGCTGGGGCAGCACCAGTCCTAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 72 bp CCAACCTCGGCCAAACCCACACTACCCAGTCAGTGCTaGCACACAGATCACCCTAACCCCGGCCTCTCTCCC +
Preference number: 3 (lower is better)
Translates to: PTSAKPTLPSQC*HTDHPNPGLSP
Trigger: GGGAGAGAGGCCGGGGTTAGGGTGATCTGTGTGGCAGCACTGACTGGGTAGTGTGGGTTTGGCCGAGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 72 bp ACGCTGCCCACGAAACTCCCATACCACATTGTCCAATaGCTCCCTCGGCCCTGGACGGAGGAGACCCACGAG +
Preference number: 3 (lower is better)
Translates to: TLPTKLPYHIVQ*LPRPWTEETHE
Trigger: CTCGTGGGTCTCCTCCGTCCAGGGCCGAGGGAGGCATTGGACAATGTGGTATGGGAGTTTCGTGGGCAGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 72 bp TCCAGAGAAGGGAGGGCAGAGAAAGTCTGTGTGGTGTaGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCC +
Preference number: 3 (lower is better)
Translates to: SREGRAEKVCVV*LRTPLRGAFLA
Trigger: GGCCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCTTCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
3UTR CCA 72 bp GGGGAACATAGCAAGGACTGCAGCCCAGGCTTGGCCTaGAGTAGACACAGCCGGGGCTGGGCTATGAGCATC +
Preference number: 3 (lower is better)
Translates to: GEHSKDCSPGLA*SRHSRGWAMSI
Trigger: GATGCTCATAGCCCAGCCCCGGCTGTGTCTACTCCAGGCCAAGCCTGGGCTGCAGTCCTTGCTATGTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 72 bp CCACCTTGGGGAACAACCCAGGGCCGGCTTCCACGCTaGCCACGAAACTCCCATACCACATTGTCCAATGCC +
Preference number: 3 (lower is better)
Translates to: PPWGTTQGRLPR*PRNSHTTLSNA
Trigger: GGCATTGGACAATGTGGTATGGGAGTTTCGTGGGCAGCGTGGAAGCCGGCCCTGGGTTGTTCCCCAAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 72 bp GGCTCCAAGGAAGTCGTGTGCTCCCACTGTCACCCATaGTCTGCTGCCTCCCAACCCTCTCCCAACGCAACT +
Preference number: 3 (lower is better)
Translates to: GSKEVVCSHCHP*SAASQPSPNAT
Trigger: AGTTGCGTTGGGAGAGGGTTGGGAGGCAGCAGAGCATGGGTGACAGTGGGAGCACACGACTTCCTTGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 72 bp GTCTTGGGGGATGCTGGCTCAGATCAATACCCCGACTaGCCAGTCGAGGGAACTGCTGAGAGCGGCTTGCGT +
Preference number: 3 (lower is better)
Translates to: VLGDAGSDQYPD*PVEGTAESGLR
Trigger: ACGCAAGCCGCTCTCAGCAGTTCCCTCGACTGGCCAGTCGGGGTATTGATCTGAGCCAGCATCCCCCAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 72 bp CAAGGAAGTCGTGTGCTCCCACTGTCACCCATGCTCTaGTGCCTCCCAACCCTCTCCCAACGCAACTGGGTT +
Preference number: 3 (lower is better)
Translates to: QGSRVLPLSPML*CLPTLSQRNWV
Trigger: AACCCAGTTGCGTTGGGAGAGGGTTGGGAGGCAGCAGAGCATGGGTGACAGTGGGAGCACACGACTTCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CAA 90 bp AAGGGGGCCACACAGTGCCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTTACTGCTGAGAGCGGCTaGCGTGTGTCGAGGAGCAGA +
Preference number: 3 (lower is better)
Translates to: KGATQCPSTQSHSSHSSLTAESG*RVSRSR
Trigger: TCTGCTCCTCGACACACGCAAGCCGCTCTCAGCAGT...AAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTGGCCCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 72 bp ATGAGCATCTTAAGCCATTTCCACTTCTGCTCCAGCTaGCTGACCACCTGGGACCCGCAAAGGCCCAGGCTC +
Preference number: 3 (lower is better)
Translates to: MSILSHFHFCSS*LTTWDPQRPRL
Trigger: GAGCCTGGGCCTTTGCGGGTCCCAGGTGGTCAGGCAGCTGGAGCAGAAGTGGAAATGGCTTAAGATGCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 72 bp AAGCAAAGCCTGCTCAGCTGGCTCCAAGCTGAGATTTaGAAGGGGGCCACACAGTGCCCTTCAACGCAGTCC +
Preference number: 3 (lower is better)
Translates to: KQSLLSWLQAEI*KGATQCPSTQS
Trigger: GGACTGCGTTGAAGGGCACTGTGTGGCCCCCTTCCAAATCTCAGCTTGGAGCCAGCTGAGCAGGCTTTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 72 bp AGCCCAGGCTTGGCCTGGAGTAGACACAGCCGGGGCTaGGCTATGAGCATCTTAAGCCATTTCCACTTCTGC +
Preference number: 3 (lower is better)
Translates to: SPGLAWSRHSRG*AMSILSHFHFC
Trigger: GCAGAAGTGGAAATGGCTTAAGATGCTCATAGCCCAGCCCCGGCTGTGTCTACTCCAGGCCAAGCCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 72 bp ACGCAGTCCCACTCAAGCCATTCAAGTCTTGGGGGATaGTGGCTCAGATCAATACCCCGACTGGCCAGTCGA +
Preference number: 3 (lower is better)
Translates to: TQSHSSHSSLGG*WLRSIPRLASR
Trigger: TCGACTGGCCAGTCGGGGTATTGATCTGAGCCAGCATCCCCCAAGACTTGAATGGCTTGAGTGGGACTGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 72 bp CCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTTaGGGGATGCTGGCTCAGATCAATACCCCGACTGGC +
Preference number: 3 (lower is better)
Translates to: PFNAVPLKPFKS*GMLAQINTPTG
Trigger: GCCAGTCGGGGTATTGATCTGAGCCAGCATCCCCCAAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 72 bp CTGCTGCCTCCCAACCCTCTCCCAACGCAACTGGGTTaGAAATGGATCTCGGCAGACCAGAGTCAGAGTAAC +
Preference number: 3 (lower is better)
Translates to: LLPPNPLPTQLG*KWISADQSQSN
Trigger: GTTACTCTGACTCTGGTCTGCCGAGATCCATTTCCAACCCAGTTGCGTTGGGAGAGGGTTGGGAGGCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 72 bp ATGCTCTGCTGCCTCCCAACCCTCTCCCAACGCAACTaGGTTGGAAATGGATCTCGGCAGACCAGAGTCAGA +
Preference number: 3 (lower is better)
Translates to: MLCCLPTLSQRN*VGNGSRQTRVR
Trigger: TCTGACTCTGGTCTGCCGAGATCCATTTCCAACCCAGTTGCGTTGGGAGAGGGTTGGGAGGCAGCAGAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 72 bp CCCACTCCAGGAGAGAGCTCTTCTAGAGCCAGAGCTTaGTGTCTCAAGGGGGAAGACCCCTGTCCTAGGAAA +
Preference number: 3 (lower is better)
Translates to: PTPGESSSRARA*CLKGEDPCPRK
Trigger: TTTCCTAGGACAGGGGTCTTCCCCCTTGAGACACCAAGCTCTGGCTCTAGAAGAGCTCTCTCCTGGAGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 72 bp GTGATGCTAGACCCAGCTGGCAGACAACAGCAACGGTaGGGCAGGATCATGGGGTATAAAGTCTCCCTGGGT +
Preference number: 3 (lower is better)
Translates to: VMLDPAGRQQQR*GRIMGYKVSLG
Trigger: ACCCAGGGAGACTTTATACCCCATGATCCTGCCCCACCGTTGCTGTTGTCTGCCAGCTGGGTCTAGCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CAA 90 bp AGTAGACACAGCCGGGGCTGGGCTATGAGCATCTTAAGCCATTTCCACTTCTGCCAGGGAGTGAGAAAATaGGGGTGGTCCCTACCCAGG +
Preference number: 3 (lower is better)
Translates to: SRHSRGWAMSILSHFHFCQGVRK*GWSLPR
Trigger: CCTGGGTAGGGACCACCCCAATTTTCTCACTCCCTG...GCAGAAGTGGAAATGGCTTAAGATGCTCATAGCCCAGCCCCGGCTGTGTCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CAA 90 bp AGACTCCCCACTCCAGGAGAGAGCTCTTCTAGAGCCAGAGCTTGGTGTCTCAAGATCTCTAAGCCTCTATaGTTGGCTGGCGAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: RLPTPGESSSRARAWCLKISKPL*LAGEGG
Trigger: CCCTCCCTCGCCAGCCAACAATAGAGGCTTAGAGAT...CTTGAGACACCAAGCTCTGGCTCTAGAAGAGCTCTCTCCTGGAGTGGGGAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 72 bp ATGTGGAGAACAATAGAAATTGACAGCACCATTCCTTaGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGG +
Preference number: 3 (lower is better)
Translates to: MWRTIEIDSTIP*VGGGWRRGTRW
Trigger: CCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGCTGTCAATTTCTATTGTTCTCCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355609.8
ENST00000455833.7
3UTR CCA 72 bp CTCCAGGCAAGGCAGAGGGACCCAAGTTCTAGTCCTTaGGCACATTTTGCTACCTTGACCACTAGAGGGAGC +
Preference number: 3 (lower is better)
Translates to: LQARQRDPSSSP*AHFATLTTRGS
Trigger: GCTCCCTCTAGTGGTCAAGGTAGCAAAATGTGCCCAAGGACTAGAACTTGGGTCCCTCTGCCTTGCCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 72 bp CACCTTTCTCTCCTTCAGGGAGTGAGAAAATTGGGGTaGTCCCTACCCAGGCCTAGAAAGCTCACAGAGGCA +
Preference number: 3 (lower is better)
Translates to: HLSLLQGVRKLG*SLPRPRKLTEA
Trigger: TGCCTCTGTGAGCTTTCTAGGCCTGGGTAGGGACCACCCCAATTTTCTCACTCCCTGAAGGAGAGAAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 72 bp AACCCAAGGCGGGTAGAAGGGAGCAGAGACCAGGCCTaGCCCCTTCAGACTTTCTCACAGAGAAATTACAGA +
Preference number: 3 (lower is better)
Translates to: NPRRVEGSRDQA*PLQTFSQRNYR
Trigger: TCTGTAATTTCTCTGTGAGAAAGTCTGAAGGGGCCAGGCCTGGTCTCTGCTCCCTTCTACCCGCCTTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR TCA 72 bp AATAATAAAGCAAAGCCTGCTCAGCTGGCTCCAAGCTaGGATTTGGAAGGGGGCCACACAGTGCCCTTCAAC +
Preference number: 3 (lower is better)
Translates to: NNKAKPAQLAPS*DLEGGHTVPFN
Trigger: GTTGAAGGGCACTGTGTGGCCCCCTTCCAAATCTCAGCTTGGAGCCAGCTGAGCAGGCTTTGCTTTATTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR TCA 72 bp CCTGTCAAAGGGAACTGTTTGGCTAACAAGAGATGCTaGCTATGGAAGTGTCACAGCCAGACTGCCACAGGG +
Preference number: 3 (lower is better)
Translates to: PVKGNCLANKRC*LWKCHSQTATG
Trigger: CCCTGTGGCAGTCTGGCTGTGACACTTCCATAGTCAGCATCTCTTGTTAGCCAAACAGTTCCCTTTGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR TCA 72 bp CCTGCCCTCGAGGAAACGGAAAATCTTTTTAGCAGCTaGGGTCCAAGCCCAACTGGCTCTGATAACCTTTGG +
Preference number: 3 (lower is better)
Translates to: PALEETENLFSS*GPSPTGSDNLW
Trigger: CCAAAGGTTATCAGAGCCAGTTGGGCTTGGACCTCAGCTGCTAAAAAGATTTTCCGTTTCCTCGAGGGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 72 bp GGACAGGAATGGGTTCCATTCAATCCAGCAACAACATaGACCATGTCTCGTCCACAGGAAAATGCTGGGCTA +
Preference number: 3 (lower is better)
Translates to: GQEWVPFNPATT*TMSRPQENAGL
Trigger: TAGCCCAGCATTTTCCTGTGGACGAGACATGGTGCATGTTGTTGCTGGATTGAATGGAACCCATTCCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 72 bp GGTCATCTGAGCTCTACCCACAGAGTTAGTCCACGATaGATTTGGCCCTTCAGGGACCTCAAGACATTTTCT +
Preference number: 3 (lower is better)
Translates to: GHLSSTHRVSPR*IWPFRDLKTFS
Trigger: AGAAAATGTCTTGAGGTCCCTGAAGGGCCAAATCCATCGTGGACTAACTCTGTGGGTAGAGCTCAGATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 72 bp CATCCATTCATAGAAAATTCCCTTCCAGAGAGAATCTaGCTTTACCTGCACCCACCCAGTCCCCTCCAGACT +
Preference number: 3 (lower is better)
Translates to: HPFIENSLPERI*LYLHPPSPLQT
Trigger: AGTCTGGAGGGGACTGGGTGGGTGCAGGTAAAGCCAGATTCTCTCTGGAAGGGAATTTTCTATGAATGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR-3UTR CAA 90 bp AGACTCCCCACTCCAGGAGAGAGCTCTTCTAGAGCCAGAGCTTGGTGTCTCAAGAAGAATCAGGTATGTTaGAACCCTGTAACCTTTAGA +
Preference number: 3 (lower is better)
Translates to: RLPTPGESSSRARAWCLKKNQVC*NPVTFR
Trigger: TCTAAAGGTTACAGGGTTCAAACATACCTGATTCTT...CTTGAGACACCAAGCTCTGGCTCTAGAAGAGCTCTCTCCTGGAGTGGGGAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 72 bp AGCAACAACATGCACCATGTCTCGTCCACAGGAAAATaGTGGGCTACCACAACTGCCTACCCTAGATTAAAA +
Preference number: 3 (lower is better)
Translates to: SNNMHHVSSTGK*WATTTAYPRLK
Trigger: TTTTAATCTAGGGTAGGCAGTTGTGGTAGCCCAGCATTTTCCTGTGGACGAGACATGGTGCATGTTGTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR GCA 72 bp AAATCAGGTAGATGCAAAAACATCCACAAGGGGTCTTaGAGGGAAGGGCTTTGCCTCATTTCTTTGAGGGCT +
Preference number: 3 (lower is better)
Translates to: KSGRCKNIHKGS*REGLCLISLRA
Trigger: AGCCCTCAAAGAAATGAGGCAAAGCCCTTCCCTGCAAGACCCCTTGTGGATGTTTTTGCATCTACCTGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CCA 72 bp TCACAGAGAAATTACAGATCTCTAAGCCTCTATTGTTaGCTGGCGAGGGAGGGAAGAACATCAAGTTATCAG +
Preference number: 3 (lower is better)
Translates to: SQRNYRSLSLYC*LAREGRTSSYQ
Trigger: CTGATAACTTGATGTTCTTCCCTCCCTCGCCAGCCAACAATAGAGGCTTAGAGATCTGTAATTTCTCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp CCCATGAGGAGAGGTGGCAGGGCCCCATCACCAAGACCACCAGGCTCGCAGGGCACGGATGGCCCCGGATaGGGGCGCCGAGGCGAGAGA +
Preference number: 4 (lower is better)
Translates to: PMRRGGRAPSPRPPGSQGTDGPG*GRRGER
Trigger: TCTCTCGCCTCGGCGCCCGCATCCGGGGCCATCCGT...GCCCTGCGAGCCTGGTGGTCTTGGTGATGGGGCCCTGCCACCTCTCCTCATGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp GGTCCGGAAGGAAGCAAGCGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCGCAGCGAGTTCACCATaGGCCGGCTGCGCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GPEGSKRSGRPVPCGNPSAASSP*AGCAAQ
Trigger: CTGAGCCGCGCAGCCGGCGCATGGTGAACTCGCTGC...GCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCGCTTGCTTCCTTCCGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp GAGAGGCAGGCAGGCAGGCAGGCAGGCCGGACCCAGGAACCAGCCCAGGAGGCACATTCCTTGGGTGGGTaGGGGATGGAGACGGGGCAC +
Preference number: 4 (lower is better)
Translates to: ERQAGRQAGRTQEPAQEAHSLGG*GMETGH
Trigger: GTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATG...TGCCTCCTGGGCTGGTTCCTGGGTCCGGCCTGCCTGCCTGCCTGCCTGCCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp TCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGAGGCCGCGGTATCTaGGCGGGGCCAGAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: SLGGWGMETGHPLVVWKEGGRGI*AGPEGS
Trigger: CGACCCTTCTGGCCCCGCGCAGATACCGCGGCCTCC...TTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp AGGCAGGCCGGACCCAGGAACCAGCCCAGGAGGCAGGCCCATCACACTCTGGCTTCTCCAGCAGCCGGTTaGGCCGCTCCAGCTCGTGCA +
Preference number: 4 (lower is better)
Translates to: RQAGPRNQPRRQAHHTLASPAAG*AAPARA
Trigger: TGCACGAGCTGGAGCGGCGCAACCGGCTGCTGGAGA...AGCCAGAGTGTGATGGGCCTGCCTCCTGGGCTGGTTCCTGGGTCCGGCCTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp CCCATGAGGAGAGGTGGCAGGGCCCCATCACCAAGACCACCAGGCTCGCAGGGCCCGGTCTGCACGGCCTaGTCGCGGGAGAAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: PMRRGGRAPSPRPPGSQGPVCTA*SREKVL
Trigger: CAAGACCTTCTCCCGCGAGCAGGCCGTGCAGACCGG...GCCCTGCGAGCCTGGTGGTCTTGGTGATGGGGCCCTGCCACCTCTCCTCATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp GCTCCTTCCTGGGGGTTGGCAGAGCACCCCAAGCTCCAGGCCGAGTCTGGGCTGGGAACCCCAGCCTCATaGCCAACCTCGGCCAAACCC +
Preference number: 4 (lower is better)
Translates to: APSWGLAEHPKLQAESGLGTPAS*PTSAKP
Trigger: GGGTTTGGCCGAGGTTGGTCATGAGGCTGGGGTTCC...CAGCCCAGACTCGGCCTGGAGCTTGGGGTGCTCTGCCAACCCCCAGGAAGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp GGCAAGCGGCTCCTTCCTGGGGGTTGGCAGAGCACCCCAAGCTCCAGGCCGAGTTCTGCTCCAGCTGCCTaGCCACCTGGGACCCGCAAA +
Preference number: 4 (lower is better)
Translates to: GKRLLPGGWQSTPSSRPSSAPAA*PPGTRK
Trigger: TTTGCGGGTCCCAGGTGGTCAGGCAGCTGGAGCAGA...ACTCGGCCTGGAGCTTGGGGTGCTCTGCCAACCCCCAGGAAGGAGCCGCTTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp GAGGAGAGGTGGCAGGGCCCCATCACCAAGACCACCAGGCTCGCAGGGCCTCAGTACTTCCTGAGTCGCTaGTGGCCACGGAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: EERWQGPITKTTRLAGPQYFLSR*WPRSWG
Trigger: CCCCCAGCTCCGTGGCCAGCAGCGACTCAGGAAGTA...CTGAGGCCCTGCGAGCCTGGTGGTCTTGGTGATGGGGCCCTGCCACCTCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR GCA 90 bp AGGCAGGCCGGACCCAGGAACCAGCCCAGGAGGCAGGCCCATCACACTCTGGCTTACTTCCTGAGTCGCTaGTGGCCACGGAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RQAGPRNQPRRQAHHTLAYFLSR*WPRSWG
Trigger: CCCCCAGCTCCGTGGCCAGCAGCGACTCAGGAAGTA...AGCCAGAGTGTGATGGGCCTGCCTCCTGGGCTGGTTCCTGGGTCCGGCCTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp CATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGGTCAGGGAGGCCAGTaGCTTGCGGGAACCCCAGCC +
Preference number: 4 (lower is better)
Translates to: HSLGGWGMETGHPLVVWKGQGGQ*LAGTPA
Trigger: GGCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACC...CTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp GAGAGGCAGGCAGGCAGGCAGGCAGGCCGGACCCAGGAACCAGCCCAGGAGGCAGAACATAGCAAGGACTaGAGCCCAGGCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ERQAGRQAGRTQEPAQEAEHSKD*SPGLAW
Trigger: CCAGGCCAAGCCTGGGCTGCAGTCCTTGCTATGTTC...TGCCTCCTGGGCTGGTTCCTGGGTCCGGCCTGCCTGCCTGCCTGCCTGCCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp GAGAGGCAGGCAGGCAGGCAGGCAGGCCGGACCCAGGAACCAGCCCAGGAGGCAGAATCTGGCTTTACCTaGACCCACCCAGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: ERQAGRQAGRTQEPAQEAESGFT*THPVPS
Trigger: GGAGGGGACTGGGTGGGTGCAGGTAAAGCCAGATTC...TGCCTCCTGGGCTGGTTCCTGGGTCCGGCCTGCCTGCCTGCCTGCCTGCCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp CAGCACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTTCCTGAGTCGCTGCTaGCCACGGAGCTGGGGGACG +
Preference number: 4 (lower is better)
Translates to: QHHSLGGWGMETGHPLVVFLSRC*PRSWGT
Trigger: CGTCCCCCAGCTCCGTGGCCAGCAGCGACTCAGGAA...CACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355609.8
ENST00000455833.7
CDS-3UTR CCA 90 bp TTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGATGGGTGGGTGGGGGATaGAGACGGGGCACCCGTTGG +
Preference number: 4 (lower is better)
Translates to: LGGWGMETGHPLVVWKEGWVGGG*RRGTRW
Trigger: CCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCA...TCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp GCTCCTTCCTGGGGGTTGGCAGAGCACCCCAAGCTCCAGGCCGAGTCTGGGCTGTACACCACGGCCGGTTaGCCCGGCCCTCAGCTTAGA +
Preference number: 4 (lower is better)
Translates to: APSWGLAEHPKLQAESGLYTTAG*PGPQLR
Trigger: TCTAAGCTGAGGGCCGGGCCAACCGGCCGTGGTGTA...CAGCCCAGACTCGGCCTGGAGCTTGGGGTGCTCTGCCAACCCCCAGGAAGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp GACAGCACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGGCCACAGGGGACCCGTaGGAGGTGCCCCCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: DSTIPWVGGGWRRGTRWWATGDP*EVPPAK
Trigger: TTTTGCTGGGGGCACCTCCCACGGGTCCCCTGTGGC...CCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGCTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp CCCATGAGGAGAGGTGGCAGGGCCCCATCACCAAGACCACCAGGCTCGCAGGGCCCACCAGCTCGGCCTTaGGCCGCTCGATCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PMRRGGRAPSPRPPGSQGPPARP*AARSSH
Trigger: ATGAGAAGATCGAGCGGCTCAAGGCCGAGCTGGTGG...GCCCTGCGAGCCTGGTGGTCTTGGTGATGGGGCCCTGCCACCTCTCCTCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR TCA 90 bp AGGCAGGCCGGACCCAGGAACCAGCCCAGGAGGCAGGCCCATCACACTCTGGCTAGTCGAGGGAACTGCTaGGAGCGGCTTGCGTGTGTC +
Preference number: 4 (lower is better)
Translates to: RQAGPRNQPRRQAHHTLASRGNC*ERLACV
Trigger: GACACACGCAAGCCGCTCTCAGCAGTTCCCTCGACT...AGCCAGAGTGTGATGGGCCTGCCTCCTGGGCTGGTTCCTGGGTCCGGCCTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp GAGAGGCAGGCAGGCAGGCAGGCAGGCCGGACCCAGGAACCAGCCCAGGAGGCACACCCACCACATTTCTaGATTTCCTGCAGCCCACCC +
Preference number: 4 (lower is better)
Translates to: ERQAGRQAGRTQEPAQEAHPPHF*ISCSPP
Trigger: GGGTGGGCTGCAGGAAATTCAGAAATGTGGTGGGTG...TGCCTCCTGGGCTGGTTCCTGGGTCCGGCCTGCCTGCCTGCCTGCCTGCCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp CCCATGAGGAGAGGTGGCAGGGCCCCATCACCAAGACCACCAGGCTCGCAGGGCTCCTGTGCTGCCTCCTaGAGCGTGTCCACCATGGTC +
Preference number: 4 (lower is better)
Translates to: PMRRGGRAPSPRPPGSQGSCAAS*SVSTMV
Trigger: GACCATGGTGGACACGCTGCAGGAGGCAGCACAGGA...GCCCTGCGAGCCTGGTGGTCTTGGTGATGGGGCCCTGCCACCTCTCCTCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR GCA 90 bp GCAGGCCGGACCCAGGAACCAGCCCAGGAGGCAGGCCCATCACACTCTGGCTTTGGCATCAGCCTCCTGTaGTGCCTCCTGCAGCGTGTC +
Preference number: 4 (lower is better)
Translates to: AGRTQEPAQEAGPSHSGFGISLL*CLLQRV
Trigger: GACACGCTGCAGGAGGCAGCACAGGAGGCTGATGCC...AAAGCCAGAGTGTGATGGGCCTGCCTCCTGGGCTGGTTCCTGGGTCCGGCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp GACAGCACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGCGCTCGCTCTGCTGCTaGTCCAGCTGCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: DSTIPWVGGGWRRGTRWWRSLCC*SSCFSS
Trigger: GCTGGAGAAGCAGCTGGAGCAGCAGCAGAGCGAGCG...CCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp AGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCTGGGTGGGTGGGGGATaGAGACGGGGCACCCGTTGG +
Preference number: 4 (lower is better)
Translates to: REGRESLCGVASNPTPRGWVGGG*RRGTRW
Trigger: CCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCA...GCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp AGGCCCAGGCTCCAAGGAAGTCGTGTGCTCCCACTGTCACCCATGCTCTGCTGCTGGGTGGGTGGGGGATaGAGACGGGGCACCCGTTGG +
Preference number: 4 (lower is better)
Translates to: RPRLQGSRVLPLSPMLCCWVGGG*RRGTRW
Trigger: CCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCA...GCAGCAGAGCATGGGTGACAGTGGGAGCACACGACTTCCTTGGAGCCTGGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp CACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGCATTCCTTGGGTGGGTaGGGGATGGAGACGGGGCAC +
Preference number: 4 (lower is better)
Translates to: HHSLGGWGMETGHPLVVWHSLGG*GMETGH
Trigger: GTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATG...CCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp CACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGGCACCATTCCTTGGGTaGGTGGGGGATGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: HHSLGGWGMETGHPLVVWAPFLG*VGDGDG
Trigger: CCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGC...CCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp TCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAACCCTCCCACCACCTTaGGGAACAACCCAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SLGGWGMETGHPLVVWKETLPPP*GTTQGR
Trigger: CCGGCCCTGGGTTGTTCCCCAAGGTGGTGGGAGGGT...TTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp GAGAGGCAGGCAGGCAGGCAGGCAGGCCGGACCCAGGAACCAGCCCAGGAGGCAGGTGGGGCAGGATCATaGGGTATAAAGTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: ERQAGRQAGRTQEPAQEAGGAGS*GIKSPW
Trigger: CCAGGGAGACTTTATACCCCATGATCCTGCCCCACC...TGCCTCCTGGGCTGGTTCCTGGGTCCGGCCTGCCTGCCTGCCTGCCTGCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp AGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCGGAGCTGGGGGACGGTaGATTCCTGTCTGCGGAGCC +
Preference number: 4 (lower is better)
Translates to: REGRESLCGVASNPTPRGGAGGR*IPVCGA
Trigger: GGCTCCGCAGACAGGAATTCACCGTCCCCCAGCTCC...GCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR TCA 90 bp GAGGAGAGGTGGCAGGGCCCCATCACCAAGACCACCAGGCTCGCAGGGCCTCAGGTGTCCACCATGGTCTaGAGGTTCATGCGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: EERWQGPITKTTRLAGPQVSTMV*RFMRLA
Trigger: CGCCAAGCGCATGAACCTTCAGACCATGGTGGACAC...CTGAGGCCCTGCGAGCCTGGTGGTCTTGGTGATGGGGCCCTGCCACCTCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR GCA 90 bp GGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGAAGGAAGTACTTCCTGAGTCGCTaGTGGCCACGGAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GWGMETGHPLVVWKEGRKYFLSR*WPRSWG
Trigger: CCCCCAGCTCCGTGGCCAGCAGCGACTCAGGAAGTA...CTTCCTTCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR GCA 90 bp TTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGAGGCATCAGCCTCCTGTaGTGCCTCCTGCAGCGTGTC +
Preference number: 4 (lower is better)
Translates to: LGGWGMETGHPLVVWKEGGISLL*CLLQRV
Trigger: GACACGCTGCAGGAGGCAGCACAGGAGGCTGATGCC...TCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR GCA 90 bp ATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGGGCCGGCTTCCACGCTaGCCACGAAACTCCCATACC +
Preference number: 4 (lower is better)
Translates to: IPWVGGGWRRGTRWWCGRGRLPR*PRNSHT
Trigger: GGTATGGGAGTTTCGTGGGCAGCGTGGAAGCCGGCC...CCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp GAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCCTTCCTGAGTCGCTGCTaGCCACGGAGCTGGGGGACG +
Preference number: 4 (lower is better)
Translates to: EKVCVVWLRTPLRGAFLAFLSRC*PRSWGT
Trigger: CGTCCCCCAGCTCCGTGGCCAGCAGCGACTCAGGAA...GGCCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp CACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGCGGGGCACCCGTTGGTaGTGTGGAAGGAAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: HHSLGGWGMETGHPLVVWRGTRW*CGRKEG
Trigger: TCCTTCCTTCCTTCCACACCACCAACGGGTGCCCCG...CCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp TTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGACATTCCTTGGGTGGGTaGGGGATGGAGACGGGGCAC +
Preference number: 4 (lower is better)
Translates to: FLGWVGDGDGAPVGGVEGHSLGG*GMETGH
Trigger: GTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATG...TCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp ATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGGCACCATTCCTTGGGTaGGTGGGGGATGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: IPWVGGGWRRGTRWWCGRAPFLG*VGDGDG
Trigger: CCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGC...CCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp GTCGAGGGAACTGCTGAGAGCGGCTTGCGTGTGTCGAGGAGCAGAAAGAGGATGCTCCTCGGGACGCGGTaGAGGCCGCGGTATCTGCGC +
Preference number: 4 (lower is better)
Translates to: VEGTAESGLRVSRSRKRMLLGTR*RPRYLR
Trigger: GCGCAGATACCGCGGCCTCCACCGCGTCCCGAGGAG...CATCCTCTTTCTGCTCCTCGACACACGCAAGCCGCTCTCAGCAGTTCCCTCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CAA 72 bp CCCGACTGGCCAGTCGAGGGAACTGCTGAGAGCGGCTaGCGTGTGTCGAGGAGCAGAAAGAGGATGGCCCTC +
Preference number: 4 (lower is better)
Translates to: PDWPVEGTAESG*RVSRSRKRMAL
Trigger: GAGGGCCATCCTCTTTCTGCTCCTCGACACACGCAAGCCGCTCTCAGCAGTTCCCTCGACTGGCCAGTCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp GCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGGAGCTGGGGGACGGTaGATTCCTGTCTGCGGAGCC +
Preference number: 4 (lower is better)
Translates to: AEKVCVVWLRTPLRGAFLGAGGR*IPVCGA
Trigger: GGCTCCGCAGACAGGAATTCACCGTCCCCCAGCTCC...CAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR TCA 90 bp CAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGGGAGCTGGGGGACGGTaGATTCCTGTCTGCGGAGCC +
Preference number: 4 (lower is better)
Translates to: QRKSVWCGFEPHSEGPSWGAGGR*IPVCGA
Trigger: GGCTCCGCAGACAGGAATTCACCGTCCCCCAGCTCC...CCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR TCA 90 bp CAGCACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGCTCATCTGTACTTCCTaGGTCGCTGCTGGCCACGGA +
Preference number: 4 (lower is better)
Translates to: QHHSLGGWGMETGHPLVVLICTS*VAAGHG
Trigger: TCCGTGGCCAGCAGCGACTCAGGAAGTACAGATGAG...CACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355609.8
ENST00000455833.7
CDS-3UTR TCA 90 bp TGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGAAGCCTCAGTCATCAGCTaGCCATGGGCTCCACATCCG +
Preference number: 4 (lower is better)
Translates to: WVGGGWRRGTRWWCGRKEASVIS*PWAPHP
Trigger: CGGATGTGGAGCCCATGGTCAGCTGATGACTGAGGC...TTCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR TCA 90 bp CATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGCCTCAGTCATCAGCTaGCCATGGGCTCCACATCCG +
Preference number: 4 (lower is better)
Translates to: HSLGGWGMETGHPLVVWKASVIS*PWAPHP
Trigger: CGGATGTGGAGCCCATGGTCAGCTGATGACTGAGGC...CTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR TCA 90 bp TCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAACCACCAGCTCGGCCTTaGGCCGCTCGATCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: SLGGWGMETGHPLVVWKEPPARP*AARSSH
Trigger: ATGAGAAGATCGAGCGGCTCAAGGCCGAGCTGGTGG...TTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR GCA 90 bp TTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGATCCTGTGCTGCCTCCTaGAGCGTGTCCACCATGGTC +
Preference number: 4 (lower is better)
Translates to: FLGWVGDGDGAPVGGVEGSCAAS*SVSTMV
Trigger: GACCATGGTGGACACGCTGCAGGAGGCAGCACAGGA...TCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR GCA 90 bp TCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAATCAGCCTCCTGTGCTaGCTCCTGCAGCGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SLGGWGMETGHPLVVWKEISLLC*LLQRVH
Trigger: GTGGACACGCTGCAGGAGGCAGCACAGGAGGCTGAT...TTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR GCA 90 bp GGCAAGCGGCTCCTTCCTGGGGGTTGGCAGAGCACCCCAAGCTCCAGGCCGAGTTCTTCTGAGTTCCGCTaGTGTGCGACATCGCACAGC +
Preference number: 4 (lower is better)
Translates to: GKRLLPGGWQSTPSSRPSSSEFR*CATSHS
Trigger: GCTGTGCGATGTCGCACAGCAGCGGAACTCAGAAGA...ACTCGGCCTGGAGCTTGGGGTGCTCTGCCAACCCCCAGGAAGGAGCCGCTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp GAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCCGTGTCACAGCCAGACTaGCACAGGGGACCCGTGGGA +
Preference number: 4 (lower is better)
Translates to: EKVCVVWLRTPLRGAFLAVSQPD*HRGPVG
Trigger: TCCCACGGGTCCCCTGTGGCAGTCTGGCTGTGACAC...GGCCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp CATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGCCTCTCCTACCCACCTaGCCCAAGTCCTCACTCCCA +
Preference number: 4 (lower is better)
Translates to: HSLGGWGMETGHPLVVWKPLLPT*PKSSLP
Trigger: TGGGAGTGAGGACTTGGGGCAGGTGGGTAGGAGAGG...CTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp GACAGCACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTCACTTTTGGCTGTaGCCAGCTCGAGCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: DSTIPWVGGGWRRGTRWWCHFWL*PARARP
Trigger: AGGGCGAGCTCGAGCTGGCCACAGCCAAAAGTGACA...CCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355609.8
CDS-3UTR CCA 90 bp TTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGATGCTGGCCACGGAGCTaGGGGACGGTGAATTCCTGT +
Preference number: 4 (lower is better)
Translates to: FLGWVGDGDGAPVGGVEGCWPRS*GTVNSC
Trigger: ACAGGAATTCACCGTCCCCCAGCTCCGTGGCCAGCA...TCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp AGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCTTCCTGAGTCGCTGCTaGCCACGGAGCTGGGGGACG +
Preference number: 4 (lower is better)
Translates to: RESLCGVASNPTPRGLPGFLSRC*PRSWGT
Trigger: CGTCCCCCAGCTCCGTGGCCAGCAGCGACTCAGGAA...GCCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp AAGGGGGCCACACAGTGCCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTTAGACGGCAGGACGGATaGCCCCGGATGCGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: KGATQCPSTQSHSSHSSLRRQDG*PRMRAP
Trigger: CGGCGCCCGCATCCGGGGCCATCCGTCCTGCCGTCT...AAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTGGCCCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp GCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGCAAGCGGCTCCTTCCTaGGGGTTGGCAGAGCACCCC +
Preference number: 4 (lower is better)
Translates to: AEKVCVVWLRTPLRGAFLQAAPS*GLAEHP
Trigger: GGGGTGCTCTGCCAACCCCCAGGAAGGAGCCGCTTG...CAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp GGTCCGGAAGGAAGCAAGCGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCAGCAGAGACCAGGCCTaGCCCCTTCAGACTTTCTCA +
Preference number: 4 (lower is better)
Translates to: GPEGSKRSGRPVPCGNPSSRDQA*PLQTFS
Trigger: TGAGAAAGTCTGAAGGGGCCAGGCCTGGTCTCTGCT...GCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCGCTTGCTTCCTTCCGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp CGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCCTCATGACCAACCTCGGCGATCAATACCCCGACTaGCCAGTCGAGGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: RSGRPVPCGNPSLMTNLGDQYPD*PVEGTA
Trigger: AGCAGTTCCCTCGACTGGCCAGTCGGGGTATTGATC...GCCGAGGTTGGTCATGAGGCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp AGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCAGCCCAGGCTTGGCCTaGAGTAGACACAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: RESLCGVASNPTPRGLPGSPGLA*SRHSRG
Trigger: GCCCCGGCTGTGTCTACTCCAGGCCAAGCCTGGGCT...GCCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp CAGCACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGGAGAGGAGAATGGGGTaGAGTGGGACCTACACTCTG +
Preference number: 4 (lower is better)
Translates to: QHHSLGGWGMETGHPLVVERRMG*SGTYTL
Trigger: CAGAGTGTAGGTCCCACTTCACCCCATTCTCCTCTC...CACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp GGAGAGGTGGCAGGGCCCCATCACCAAGACCACCAGGCTCGCAGGGCCTCAGTCTTCACCTCCCCGTCCTaGTCAGAGATGTCATCATCG +
Preference number: 4 (lower is better)
Translates to: GEVAGPHHQDHQARRASVFTSPS*SEMSSS
Trigger: CGATGATGACATCTCTGAGCAGGACGGGGAGGTGAA...GACTGAGGCCCTGCGAGCCTGGTGGTCTTGGTGATGGGGCCCTGCCACCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR GCA 90 bp GGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGAAGGAAGTCCTCTTGCTCGCCCTaGAGGTCGATGGTCGGATTG +
Preference number: 4 (lower is better)
Translates to: GWGMETGHPLVVWKEGRKSSCSP*RSMVGL
Trigger: CAATCCGACCATCGACCTGCAGGGCGAGCAAGAGGA...CTTCCTTCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR GCA 90 bp CGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCCTCATGACCAACCTCGGCGCCTTCCCCTCACAGTaGCTTGTCCCTTCAACTTTG +
Preference number: 4 (lower is better)
Translates to: RSGRPVPCGNPSLMTNLGAFPSQ*LVPSTL
Trigger: CAAAGTTGAAGGGACAAGGCACTGTGAGGGGAAGGC...GCCGAGGTTGGTCATGAGGCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp GCTCCTTCCTGGGGGTTGGCAGAGCACCCCAAGCTCCAGGCCGAGTCTGGGCTGCCAAAAGCAGGCAACTaGCGGACAGTCCTAACCCAA +
Preference number: 4 (lower is better)
Translates to: APSWGLAEHPKLQAESGLPKAGN*RTVLTQ
Trigger: TTGGGTTAGGACTGTCCGGCAGTTGCCTGCTTTTGG...CAGCCCAGACTCGGCCTGGAGCTTGGGGTGCTCTGCCAACCCCCAGGAAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp GAGGAGAGGTGGCAGGGCCCCATCACCAAGACCACCAGGCTCGCAGGGCCTCAGAAAGTCTGTGTGGTGTaGCTTCGAACCCCACTCCGA +
Preference number: 4 (lower is better)
Translates to: EERWQGPITKTTRLAGPQKVCVV*LRTPLR
Trigger: TCGGAGTGGGGTTCGAAGCCACACCACACAGACTTT...CTGAGGCCCTGCGAGCCTGGTGGTCTTGGTGATGGGGCCCTGCCACCTCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp CACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGCACCCGTTGGTGGTGTaGAAGGAAGGAAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: HHSLGGWGMETGHPLVVWHPLVV*KEGRKQ
Trigger: CTGCTTCCTTCCTTCCTTCCACACCACCAACGGGTG...CCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp AGGCCCAGGCTCCAAGGAAGTCGTGTGCTCCCACTGTCACCCATGCTCTGCTGCCGGGGCACCCGTTGGTaGTGTGGAAGGAAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RPRLQGSRVLPLSPMLCCRGTRW*CGRKEG
Trigger: TCCTTCCTTCCTTCCACACCACCAACGGGTGCCCCG...GCAGCAGAGCATGGGTGACAGTGGGAGCACACGACTTCCTTGGAGCCTGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp TTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAGACAGCACCATTCCTTaGGTGGGTGGGGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: FLGWVGDGDGAPVGGVEGDSTIP*VGGGWR
Trigger: TCTCCATCCCCCACCCACCCAAGGAATGGTGCTGTC...TCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355609.8
ENST00000455833.7
CDS-3UTR CCA 90 bp GGAGAGGTGGCAGGGCCCCATCACCAAGACCACCAGGCTCGCAGGGCCTCAGTCCCAACGCAACTGGGTTaGAAATGGATCTCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: GEVAGPHHQDHQARRASVPTQLG*KWISAD
Trigger: GTCTGCCGAGATCCATTTCCAACCCAGTTGCGTTGG...GACTGAGGCCCTGCGAGCCTGGTGGTCTTGGTGATGGGGCCCTGCCACCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp GTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGAAGGAAGCACTCATCTGTACTTCCTaGGTCGCTGCTGGCCACGGA +
Preference number: 4 (lower is better)
Translates to: VGDGDGAPVGGVEGRKEALICTS*VAAGHG
Trigger: TCCGTGGCCAGCAGCGACTCAGGAAGTACAGATGAG...TGCTTCCTTCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR TCA 90 bp AGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCGCCTCAGTCATCAGCTaGCCATGGGCTCCACATCCG +
Preference number: 4 (lower is better)
Translates to: RESLCGVASNPTPRGLPGASVIS*PWAPHP
Trigger: CGGATGTGGAGCCCATGGTCAGCTGATGACTGAGGC...GCCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR TCA 90 bp CAGCTAGGACTGGTGCTGCCCCAGCGAGCGTTGGGGTCTTTCTTGGCAAGCTGTAGCGGAAGCGCACGTTaGGCCCCTTCAAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: QLGLVLPQRALGSFLASCSGSAR*APSRGG
Trigger: TCCACCTCTTGAAGGGGCTCAACGTGCGCTTCCGCT...ACAGCTTGCCAAGAAAGACCCCAACGCTCGCTGGGGCAGCACCAGTCCTAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp CACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGACACACAGCCCACCCTaGGCCTGGAAATCATCCATT +
Preference number: 4 (lower is better)
Translates to: HHSLGGWGMETGHPLVVWTHSPP*AWKSSI
Trigger: AATGGATGATTTCCAGGCTCAGGGTGGGCTGTGTGT...CCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp AGACTCCCCACTCCAGGAGAGAGCTCTTCTAGAGCCAGAGCTTGGTGTCTCAAGCAGATGCGCGCCAGATaGGGCCTCCGCAGAGACGGC +
Preference number: 4 (lower is better)
Translates to: RLPTPGESSSRARAWCLKQMRAR*GLRRDG
Trigger: GCCGTCTCTGCGGAGGCCGCATCTGGCGCGCATCTG...CTTGAGACACCAAGCTCTGGCTCTAGAAGAGCTCTCTCCTGGAGTGGGGAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp AGTAGACACAGCCGGGGCTGGGCTATGAGCATCTTAAGCCATTTCCACTTCTGCAACTCGGGCCCGGTCTaGACGGCCTGCTCGCGGGAG +
Preference number: 4 (lower is better)
Translates to: SRHSRGWAMSILSHFHFCNSGPV*TACSRE
Trigger: CTCCCGCGAGCAGGCCGTGCAGACCGGGCCCGAGTT...GCAGAAGTGGAAATGGCTTAAGATGCTCATAGCCCAGCCCCGGCTGTGTCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp AAGCGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCCTCATGACCAACCTCAACACAGTGAGGCTCTaGCTTCCCCTCACAGTGCCT +
Preference number: 4 (lower is better)
Translates to: KRSGRPVPCGNPSLMTNLNTVRL*LPLTVP
Trigger: AGGCACTGTGAGGGGAAGGCAGAGCCTCACTGTGTT...GAGGTTGGTCATGAGGCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp AGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTGCTGAGAGCGGCTTaGGTGTGTCGAGGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: REGRESLCGVASNPTPRGLLRAA*VCRGAE
Trigger: TTCTGCTCCTCGACACACGCAAGCCGCTCTCAGCAG...GCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp AAGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGAAGGGGGCCACACAGTaGCCTTCAACGCAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: KGGQRKSVWCGFEPHSEGKGATQ*PSTQSH
Trigger: GTGGGACTGCGTTGAAGGGCACTGTGTGGCCCCCTT...CCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp ATTGACAGCACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTACCACATTGTCCAATaGCTCCCTCGGCCCTGGACG +
Preference number: 4 (lower is better)
Translates to: IDSTIPWVGGGWRRGTRWYHIVQ*LPRPWT
Trigger: CGTCCAGGGCCGAGGGAGGCATTGGACAATGTGGTA...CCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGCTGTCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp TTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGACACCCGTTGGTGGTGTaGAAGGAAGGAAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LGGWGMETGHPLVVWKEGHPLVV*KEGRKQ
Trigger: CTGCTTCCTTCCTTCCTTCCACACCACCAACGGGTG...TCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp CAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCGGGGCACCCGTTGGTaGTGTGGAAGGAAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: QRKSVWCGFEPHSEGPSWRGTRW*CGRKEG
Trigger: TCCTTCCTTCCTTCCACACCACCAACGGGTGCCCCG...CCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp GAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCCCCGCAGCGTGTCCACCATaGTCTGAAGGTTCATGCGCT +
Preference number: 4 (lower is better)
Translates to: ESLCGVASNPTPRGLPGPAACPP*SEGSCA
Trigger: AGCGCATGAACCTTCAGACCATGGTGGACACGCTGC...GGGGCCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp AAGGGGGCCACACAGTGCCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTTGCGTGTAGCTCCAGATaGTCCCGGGCAGGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: KGATQCPSTQSHSSHSSLACSSR*SRAGGR
Trigger: ACGGCCGCCTGCCCGGGACCATCTGGAGCTACACGC...AAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTGGCCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp CACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGGTGAGAAAATTGGGGTaGTCCCTACCCAGGCCTAGA +
Preference number: 4 (lower is better)
Translates to: HHSLGGWGMETGHPLVVWVRKLG*SLPRPR
Trigger: TCTAGGCCTGGGTAGGGACCACCCCAATTTTCTCAC...CCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp AGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCGGAGCAGAAAGAGGATaGCCCTCACTCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: REGRESLCGVASNPTPRGGAERG*PSLQLL
Trigger: CAGGAGCTGGAGTGAGGGCCATCCTCTTTCTGCTCC...GCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp TGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGAACTCCAAGCTGAGATTTaGAAGGGGGCCACACAGTGC +
Preference number: 4 (lower is better)
Translates to: WVGGGWRRGTRWWCGRKELQAEI*KGATQC
Trigger: GCACTGTGTGGCCCCCTTCCAAATCTCAGCTTGGAG...TTCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp GAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCCGGAGACCCACGAGGGTaGATGTTTTCCTGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: EKVCVVWLRTPLRGAFLAGDPRG*MFSCPR
Trigger: TCGAGGGCAGGAAAACATCCACCCTCGTGGGTCTCC...GGCCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp GGTCCGGAAGGAAGCAAGCGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCAGAGTTAGTCCACGATaGATTTGGCCCTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GPEGSKRSGRPVPCGNPSRVSPR*IWPFRD
Trigger: GTCCCTGAAGGGCCAAATCCATCGTGGACTAACTCT...GCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCGCTTGCTTCCTTCCGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp ATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGGCTTCATCTCATCGGTaGTGTTCATGGAGCCGACCT +
Preference number: 4 (lower is better)
Translates to: IPWVGGGWRRGTRWWCGRASSHR*CSWSRP
Trigger: AGGTCGGCTCCATGAACATCACCGATGAGATGAAGC...CCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR TCA 90 bp AGGAAGCAAGCGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCCTCATGACGCTTCATCTCATCGGTaGTGTTCATGGAGCCGACCT +
Preference number: 4 (lower is better)
Translates to: RKQAVREASALREPQPHDASSHR*CSWSRP
Trigger: AGGTCGGCTCCATGAACATCACCGATGAGATGAAGC...GTCATGAGGCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCGCTTGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp TGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGAAAGCTCGAGCTCGATCTaGCCTATCGTTTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: WVGGGWRRGTRWWCGRKESSSSI*PIVSWY
Trigger: GTACCAGGAAACGATAGGTCAGATCGAGCTCGAGCT...TTCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR TCA 90 bp GTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGAAGGAAGCAGTGGATGACCAAAAGTaGGGACAGAAGACGAGGCCG +
Preference number: 4 (lower is better)
Translates to: VGDGDGAPVGGVEGRKEAVDDQK*GQKTRP
Trigger: CGGCCTCGTCTTCTGTCCTCACTTTTGGTCATCCAC...TGCTTCCTTCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp CAGCACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGGCTCATGGGTGTGGATaGCCAAAAGTGAGGACAGAA +
Preference number: 4 (lower is better)
Translates to: QHHSLGGWGMETGHPLVVAHGCG*PKVRTE
Trigger: TTCTGTCCTCACTTTTGGTCATCCACACCCATGAGC...CACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp AGAAGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGAGCTCGAGCTCGCCCTaGAGGTCGATGGTCGGATTG +
Preference number: 4 (lower is better)
Translates to: RREGRESLCGVASNPTPRSSSSP*RSMVGL
Trigger: CAATCCGACCATCGACCTGCAGGGCGAGCTCGAGCT...CCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355609.8
CDS-3UTR GCA 90 bp GTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGAAGGAAGCATGGTCTGAAGGTTCATaGGCTTGGCGAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VGDGDGAPVGGVEGRKEAWSEGS*AWRAPP
Trigger: AGGAGGAGCTCGCCAAGCGCATGAACCTTCAGACCA...TGCTTCCTTCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR GCA 90 bp AGACTCCCCACTCCAGGAGAGAGCTCTTCTAGAGCCAGAGCTTGGTGTCTCAAGCGCTCGCGCTCGCTCTaGTGCTGCTCCAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RLPTPGESSSRARAWCLKRSRSL*CCSSCF
Trigger: GAAGCAGCTGGAGCAGCAGCAGAGCGAGCGCGAGCG...CTTGAGACACCAAGCTCTGGCTCTAGAAGAGCTCTCTCCTGGAGTGGGGAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp CACACAGTGCCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTTGGGGGATGGGGAGGCCAGTGCCTTaGGGGAACCCCAGCCTCATG +
Preference number: 4 (lower is better)
Translates to: HTVPFNAVPLKPFKSWGMGRPVP*GNPSLM
Trigger: CATGAGGCTGGGGTTCCCGCAAGGCACTGGCCTCCC...CATCCCCCAAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp CAGCACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTCAAGTCTTGGGGGATaGTGGCTCAGATCAATACCC +
Preference number: 4 (lower is better)
Translates to: QHHSLGGWGMETGHPLVVSSLGG*WLRSIP
Trigger: GGGTATTGATCTGAGCCAGCATCCCCCAAGACTTGA...CACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp AGAAGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGCTGTCACCCATGCTCTaGTGCCTCCCAACCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RREGRESLCGVASNPTPRLSPML*CLPTLS
Trigger: GGAGAGGGTTGGGAGGCAGCAGAGCATGGGTGACAG...CCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp TCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGTTCATGTCACTTTTaGCTGTGGCCAGCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: SLGGWGMETGHPLVVWKEGSCHF*LWPARA
Trigger: AGCTCGAGCTGGCCACAGCCAAAAGTGACATGAACC...TTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp CCCATGAGGAGAGGTGGCAGGGCCCCATCACCAAGACCACCAGGCTCGCAGGGCCGCTCGAACTCATCCTaGATCTCATCTGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: PMRRGGRAPSPRPPGSQGRSNSS*ISSVLP
Trigger: AGGAAGTACAGATGAGATCCAGGATGAGTTCGAGCG...GCCCTGCGAGCCTGGTGGTCTTGGTGATGGGGCCCTGCCACCTCTCCTCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp GGTCCGGAAGGAAGCAAGCGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCCGCTCGAACTCATCCTaGATCTCATCTGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: GPEGSKRSGRPVPCGNPSRSNSS*ISSVLP
Trigger: AGGAAGTACAGATGAGATCCAGGATGAGTTCGAGCG...GCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCGCTTGCTTCCTTCCGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp TTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAAAGTCTGTGTGGTGTaGCTTCGAACCCCACTCCGA +
Preference number: 4 (lower is better)
Translates to: FLGWVGDGDGAPVGGVEGKVCVV*LRTPLR
Trigger: TCGGAGTGGGGTTCGAAGCCACACCACACAGACTTT...TCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp CAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGAGACGGGGCACCCGTTaGTGGTGTGGAAGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: QRKSVWCGFEPHSEGPSWRRGTR*WCGRKE
Trigger: TTCCTTCCTTCCACACCACCAACGGGTGCCCCGTCT...CCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp GCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGACAGCACCATTCCTTaGGTGGGTGGGGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: AEKVCVVWLRTPLRGAFLDSTIP*VGGGWR
Trigger: TCTCCATCCCCCACCCACCCAAGGAATGGTGCTGTC...CAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355609.8
ENST00000455833.7
CDS-3UTR CCA 90 bp GCAGGCCGGACCCAGGAACCAGCCCAGGAGGCAGGCCCATCACACTCTGGCTTTAAGGTCTCCCGCAGCTaGTTAAACATGCGCTTCATC +
Preference number: 4 (lower is better)
Translates to: AGRTQEPAQEAGPSHSGFKVSRS*LNMRFI
Trigger: GATGAAGCGCATGTTTAACCAGCTGCGGGAGACCTT...AAAGCCAGAGTGTGATGGGCCTGCCTCCTGGGCTGGTTCCTGGGTCCGGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp TCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAATGTCACTTTTGGCTGTaGCCAGCTCGAGCTCGATCT +
Preference number: 4 (lower is better)
Translates to: SLGGWGMETGHPLVVWKECHFWL*PARARS
Trigger: AGATCGAGCTCGAGCTGGCCACAGCCAAAAGTGACA...TTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp CACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGCCACCTGGAAGATCTTaGACACGTCTTCTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: HHSLGGWGMETGHPLVVWPPGRS*TRLLSS
Trigger: GGAACTCAGAAGACGTGTCCAAGATCTTCCAGGTGG...CCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp AGACTCCCCACTCCAGGAGAGAGCTCTTCTAGAGCCAGAGCTTGGTGTCTCAAGGCTCCAGGCCGAGTCTaGGCTGGCTCAGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: RLPTPGESSSRARAWCLKAPGRV*AGSGGR
Trigger: CCTTCCTCCTGAGCCAGCCCAGACTCGGCCTGGAGC...CTTGAGACACCAAGCTCTGGCTCTAGAAGAGCTCTCTCCTGGAGTGGGGAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp AGGAAGCAAGCGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCCTCATGACGCCTCTATTGTTGGCTaGCGAGGGAGGGAAGAACAT +
Preference number: 4 (lower is better)
Translates to: RKQAVREASALREPQPHDASIVG*RGREEH
Trigger: ATGTTCTTCCCTCCCTCGCCAGCCAACAATAGAGGC...GTCATGAGGCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCGCTTGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp GAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCCCGTTGGGGTCTTTCTTaGCAAGCTGTGGGCTCATGG +
Preference number: 4 (lower is better)
Translates to: EKVCVVWLRTPLRGAFLARWGLS*QAVGSW
Trigger: CCATGAGCCCACAGCTTGCCAAGAAAGACCCCAACG...GGCCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp TTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGTCCACGATGGATTTaGCCCTTCAGGGACCTCAAG +
Preference number: 4 (lower is better)
Translates to: FLGWVGDGDGAPVGGVEGSPRWI*PFRDLK
Trigger: CTTGAGGTCCCTGAAGGGCCAAATCCATCGTGGACT...TCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp AGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCAGCTCGAGCTCGATCTaGCCTATCGTTTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: REGRESLCGVASNPTPRGSSSSI*PIVSWY
Trigger: GTACCAGGAAACGATAGGTCAGATCGAGCTCGAGCT...GCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR TCA 90 bp ACCACGGCCGGTTGGCCCGGCCCTCAGCTTAGAGTTCTGTATAAAAACACCTGCCGCACAGCTTGGCCGTaGTATCGATTCGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: TTAGWPGPQLRVLYKNTCRTAWP*YRFGGR
Trigger: TCTGCCGCCGAATCGATATCACGGCCAAGCTGTGCG...GCAGGTGTTTTTATACAGAACTCTAAGCTGAGGGCCGGGCCAACCGGCCGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp AAGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCTCTCCTTCAGGGAGTaGGAAAATTGGGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: KGGQRKSVWCGFEPHSEGLSFRE*ENWGGP
Trigger: GGGACCACCCCAATTTTCTCACTCCCTGAAGGAGAG...CCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp GTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGAAGGAAGCATTCACCTCCCCGTCCTaGTCAGAGATGTCATCATCG +
Preference number: 4 (lower is better)
Translates to: VGDGDGAPVGGVEGRKEAFTSPS*SEMSSS
Trigger: CGATGATGACATCTCTGAGCAGGACGGGGAGGTGAA...TGCTTCCTTCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR GCA 90 bp AGAAGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGTCCTCTTGCTCGCCCTaGAGGTCGATGGTCGGATTG +
Preference number: 4 (lower is better)
Translates to: RREGRESLCGVASNPTPRSSCSP*RSMVGL
Trigger: CAATCCGACCATCGACCTGCAGGGCGAGCAAGAGGA...CCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR GCA 90 bp GGTCCGGAAGGAAGCAAGCGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCGTCCGCACAGAAGTCTaGATTTGTAATGTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: GPEGSKRSGRPVPCGNPSVRTEV*ICNVEN
Trigger: GTTCTCCACATTACAAATGCAGACTTCTGTGCGGAC...GCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCGCTTGCTTCCTTCCGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp GAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCCCCGGGTGGATGTTTTCCTaGCCTCGAGGAAACGGAAAA +
Preference number: 4 (lower is better)
Translates to: ESLCGVASNPTPRGLPGPGWMFS*PRGNGK
Trigger: TTTTCCGTTTCCTCGAGGGCAGGAAAACATCCACCC...GGGGCCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp GCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGCACCCGTTGGTGGTGTaGAAGGAAGGAAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: AEKVCVVWLRTPLRGAFLHPLVV*KEGRKQ
Trigger: CTGCTTCCTTCCTTCCTTCCACACCACCAACGGGTG...CAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp AAGGGGGCCACACAGTGCCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTTGCACCATTCCTTGGGTaGGTGGGGGATGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: KGATQCPSTQSHSSHSSLAPFLG*VGDGDG
Trigger: CCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGC...AAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTGGCCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp TTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGAAAGGTCTCCCGCAGCTaGTTAAACATGCGCTTCATC +
Preference number: 4 (lower is better)
Translates to: LGGWGMETGHPLVVWKEGKVSRS*LNMRFI
Trigger: GATGAAGCGCATGTTTAACCAGCTGCGGGAGACCTT...TCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp GAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCCTGTCACTTTTGGCTGTaGCCAGCTCGAGCTCGATCT +
Preference number: 4 (lower is better)
Translates to: EKVCVVWLRTPLRGAFLACHFWL*PARARS
Trigger: AGATCGAGCTCGAGCTGGCCACAGCCAAAAGTGACA...GGCCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp CCCTACCCAGGCCTAGAAAGCTCACAGAGGCAAGCGGCTCCTTCCTGGGGGTTGAGTCTTGGGGGATGCTaGCTCAGATCAATACCCCGA +
Preference number: 4 (lower is better)
Translates to: PYPGLESSQRQAAPSWGLSLGGC*LRSIPR
Trigger: TCGGGGTATTGATCTGAGCCAGCATCCCCCAAGACT...CAACCCCCAGGAAGGAGCCGCTTGCCTCTGTGAGCTTTCTAGGCCTGGGTAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp AGAAGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGTGCCCCAGCGAGCGTTaGGGTCTTTCTTGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: RREGRESLCGVASNPTPRCPSER*GLSWQA
Trigger: AGCTTGCCAAGAAAGACCCCAACGCTCGCTGGGGCA...CCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp TTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGCTGCTCATGGGTGTaGATGACCAAAAGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: FLGWVGDGDGAPVGGVEGSCSWV*MTKSED
Trigger: GTCCTCACTTTTGGTCATCCACACCCATGAGCAGCT...TCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp AGTAGACACAGCCGGGGCTGGGCTATGAGCATCTTAAGCCATTTCCACTTCTGCAGCTGCCTGACCACCTaGGACCCGCAAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SRHSRGWAMSILSHFHFCSCLTT*DPQRPR
Trigger: CCTGGGCCTTTGCGGGTCCCAGGTGGTCAGGCAGCT...GCAGAAGTGGAAATGGCTTAAGATGCTCATAGCCCAGCCCCGGCTGTGTCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp ATTGACAGCACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGAGACAACAGCAACGGTaGGGCAGGATCATGGGGTAT +
Preference number: 4 (lower is better)
Translates to: IDSTIPWVGGGWRRGTRWRQQQR*GRIMGY
Trigger: ATACCCCATGATCCTGCCCCACCGTTGCTGTTGTCT...CCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGCTGTCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp CAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGTCGGATTGCAGTTGGTaGAATCCTCCCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QRKSVWCGFEPHSEGPSWSDCSW*NPPRAA
Trigger: TGCTGCTCTGGGAGGATTTCACCAACTGCAATCCGA...CCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR TCA 90 bp ATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGCCTTGTCTCTCGTCTTaGAGAAGGATTCGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: IPWVGGGWRRGTRWWCGRPCLSS*RRIRSH
Trigger: ATGAGACCGAATCCTTCTTCAAGACGAGAGACAAGG...CCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR TCA 90 bp AGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCAATCTTTTTAGCAGCTaGGGTCCAAGCCCAACTGGC +
Preference number: 4 (lower is better)
Translates to: REGRESLCGVASNPTPRGNLFSS*GPSPTG
Trigger: GCCAGTTGGGCTTGGACCTCAGCTGCTAAAAAGATT...GCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp GGTCCGGAAGGAAGCAAGCGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCGTCCTCAAAGACAAATaGCCTATGTATACAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GPEGSKRSGRPVPCGNPSVLKDK*PMYTRR
Trigger: CCTCCTTGTATACATAGGTCATTTGTCTTTGAGGAC...GCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCGCTTGCTTCCTTCCGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp ACCACGGCCGGTTGGCCCGGCCCTCAGCTTAGAGTTCTGTATAAAAACACCTGCGGACCTACACTCTGCTaGAGCTGCTCATGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: TTAGWPGPQLRVLYKNTCGPTLC*SCSWVW
Trigger: CCACACCCATGAGCAGCTTCAGCAGAGTGTAGGTCC...GCAGGTGTTTTTATACAGAACTCTAAGCTGAGGGCCGGGCCAACCGGCCGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp GGAGAGGTGGCAGGGCCCCATCACCAAGACCACCAGGCTCGCAGGGCCTCAGTCTCTCATGGATCAAGTTaGCCAAGTTTTCCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: GEVAGPHHQDHQARRASVSHGSS*PSFPLA
Trigger: AGCAAGAGGAAAACTTGGGCAACTTGATCCATGAGA...GACTGAGGCCCTGCGAGCCTGGTGGTCTTGGTGATGGGGCCCTGCCACCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR GCA 90 bp CAGATCTCTAAGCCTCTATTGTTGGCTGGCGAGGGAGGGAAGAACATCAAGTTACCGGGCGGTTCCAGATaGGCGCCAGATGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QISKPLLLAGEGGKNIKLPGGSR*APDAAS
Trigger: GGAGGCCGCATCTGGCGCGCATCTGGAACCGCCCGG...TAACTTGATGTTCTTCCCTCCCTCGCCAGCCAACAATAGAGGCTTAGAGATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp CGGGGGACAGGAATGGGTTCCATTCAATCCAGCAACAACATGCACCATGTCTCGCGCCGCTCCAGCTCGTaGACCTTAGCCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: RGTGMGSIQSSNNMHHVSRRSSS*TLARKQ
Trigger: CTGCTTCCTGGCTAAGGTGCACGAGCTGGAGCGGCG...CGAGACATGGTGCATGTTGTTGCTGGATTGAATGGAACCCATTCCTGTCCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp AAGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGTCGTCCACAGGAAAATaGTGGGCTACCACAACTGCC +
Preference number: 4 (lower is better)
Translates to: KGGQRKSVWCGFEPHSEGSSTGK*WATTTA
Trigger: GGCAGTTGTGGTAGCCCAGCATTTTCCTGTGGACGA...CCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp CAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGGGTTCATGTCACTTTTaGCTGTGGCCAGCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: QRKSVWCGFEPHSEGPSWGSCHF*LWPARA
Trigger: AGCTCGAGCTGGCCACAGCCAAAAGTGACATGAACC...CCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp AGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCCAGAGAAAGTCTGTGTaGTGTGGCTTCGAACCCCAC +
Preference number: 4 (lower is better)
Translates to: RESLCGVASNPTPRGLPGQRKSV*CGFEPH
Trigger: GTGGGGTTCGAAGCCACACCACACAGACTTTCTCTG...GCCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp AAGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCAGAGAAAGTCTGTGTaGTGTGGCTTCGAACCCCAC +
Preference number: 4 (lower is better)
Translates to: KGGQRKSVWCGFEPHSEGQRKSV*CGFEPH
Trigger: GTGGGGTTCGAAGCCACACCACACAGACTTTCTCTG...CCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp AGAAGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGCAGCGTGTCCACCATaGTCTGAAGGTTCATGCGCT +
Preference number: 4 (lower is better)
Translates to: RREGRESLCGVASNPTPRAACPP*SEGSCA
Trigger: AGCGCATGAACCTTCAGACCATGGTGGACACGCTGC...CCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp GAGGAGAGGTGGCAGGGCCCCATCACCAAGACCACCAGGCTCGCAGGGCCTCAGAAGGATTCGGTCTCATaGATCAAGTTGCCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: EERWQGPITKTTRLAGPQKDSVS*IKLPKF
Trigger: AAACTTGGGCAACTTGATCCATGAGACCGAATCCTT...CTGAGGCCCTGCGAGCCTGGTGGTCTTGGTGATGGGGCCCTGCCACCTCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp CGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCCTCATGACCAACCTCGGCTTCATGGCCTTTTCTTaGATCTTTGTGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: RSGRPVPCGNPSLMTNLGFMAFS*IFVSRS
Trigger: AGACCTGGACACAAAGATCCAAGAAAAGGCCATGAA...GCCGAGGTTGGTCATGAGGCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp AAGCGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCCTCATGACCAACCTCTTTTTGGGGACCACCTaGAAGATCTTGGACACGTCT +
Preference number: 4 (lower is better)
Translates to: KRSGRPVPCGNPSLMTNLFLGTT*KILDTS
Trigger: AGACGTGTCCAAGATCTTCCAGGTGGTCCCCAAAAA...GAGGTTGGTCATGAGGCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp AGGAAGCAAGCGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCCTCATGACGCCAGGATCTCTTTCTaGCTCCTGCAGTTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: RKQAVREASALREPQPHDARISF*LLQFSN
Trigger: GTTTGAAAACTGCAGGAGCCAGAAAGAGATCCTGGC...GTCATGAGGCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCGCTTGCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp AGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCTTTCTTGGCAAGCTGTaGGCTCATGGTGAGGGGACA +
Preference number: 4 (lower is better)
Translates to: RESLCGVASNPTPRGLPGFLGKL*AHGEGT
Trigger: TGTCCCCTCACCATGAGCCCACAGCTTGCCAAGAAA...GCCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp ATTGACAGCACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTCCACAGGAAAATGCTaGGCTACCACAACTGCCTAC +
Preference number: 4 (lower is better)
Translates to: IDSTIPWVGGGWRRGTRWSTGKC*ATTTAY
Trigger: GTAGGCAGTTGTGGTAGCCCAGCATTTTCCTGTGGA...CCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGCTGTCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp CAGCACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGGAGAACAATAGAAATTaGCAGCACCATTCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: QHHSLGGWGMETGHPLVVENNRN*QHHSLG
Trigger: ACCCAAGGAATGGTGCTGTCAATTTCTATTGTTCTC...CACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355609.8
ENST00000455833.7
CDS-3UTR TCA 90 bp GACAGCACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGGAGAACAATAGAAATTaGCAGCACCATTCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: DSTIPWVGGGWRRGTRWWENNRN*QHHSLG
Trigger: ACCCAAGGAATGGTGCTGTCAATTTCTATTGTTCTC...CCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355609.8
ENST00000455833.7
CDS-3UTR TCA 90 bp GTCGAGGGAACTGCTGAGAGCGGCTTGCGTGTGTCGAGGAGCAGAAAGAGGATGTCGGATTGCAGTTGGTaGAATCCTCCCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VEGTAESGLRVSRSRKRMSDCSW*NPPRAA
Trigger: TGCTGCTCTGGGAGGATTTCACCAACTGCAATCCGA...CATCCTCTTTCTGCTCCTCGACACACGCAAGCCGCTCTCAGCAGTTCCCTCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp AGACTCCCCACTCCAGGAGAGAGCTCTTCTAGAGCCAGAGCTTGGTGTCTCAAGCTTGGACACGTCTTCTaGGTTCCGCTGCTGTGCGAC +
Preference number: 4 (lower is better)
Translates to: RLPTPGESSSRARAWCLKLGHVF*VPLLCD
Trigger: GTCGCACAGCAGCGGAACTCAGAAGACGTGTCCAAG...CTTGAGACACCAAGCTCTGGCTCTAGAAGAGCTCTCTCCTGGAGTGGGGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp ACTTTCTCACAGAGAAATTACAGATCTCTAAGCCTCTATTGTTGGCTGGCGAGGCCTCCGCCCCCGCCCTaGACCCAGAGGTCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: TFSQRNYRSLSLYCWLARPPPPP*TQRSGR
Trigger: CCTTCCGGACCTCTGGGTTCAGGGCGGGGGCGGAGG...CCTCGCCAGCCAACAATAGAGGCTTAGAGATCTGTAATTTCTCTGTGAGAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp GTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGAAGGAAGCAGCTAACAAGAGATGCTaGCTATGGAAGTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: VGDGDGAPVGGVEGRKEAANKRC*LWKCHS
Trigger: GCTGTGACACTTCCATAGTCAGCATCTCTTGTTAGC...TGCTTCCTTCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp CACACAGTGCCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTTGGGGGATGAGACTTCCAAGGAGCTaGGGGGTCAGAGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: HTVPFNAVPLKPFKSWGMRLPRS*GVRGEE
Trigger: CTCCTCTCCTCTGACCCCTCAGCTCCTTGGAAGTCT...CATCCCCCAAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp GCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGAGGGAAGGGTCTTGGTaGGGGATTTGCTCAGAACTA +
Preference number: 4 (lower is better)
Translates to: AEKVCVVWLRTPLRGAFLREGSW*GICSEL
Trigger: TAGTTCTGAGCAAATCCCTCACCAAGACCCTTCCCT...CAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp AGTAGACACAGCCGGGGCTGGGCTATGAGCATCTTAAGCCATTTCCACTTCTGCATCAGCCTCCTGTGCTaGCTCCTGCAGCGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SRHSRGWAMSILSHFHFCISLLC*LLQRVH
Trigger: GTGGACACGCTGCAGGAGGCAGCACAGGAGGCTGAT...GCAGAAGTGGAAATGGCTTAAGATGCTCATAGCCCAGCCCCGGCTGTGTCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp GCAACAACATGCACCATGTCTCGTCCACAGGAAAATGCTGGGCTACCACAACTGCACTTCTGCTCCAGCTaGCTGACCACCTGGGACCCG +
Preference number: 4 (lower is better)
Translates to: ATTCTMSRPQENAGLPQLHFCSS*LTTWDP
Trigger: CGGGTCCCAGGTGGTCAGGCAGCTGGAGCAGAAGTG...CAGTTGTGGTAGCCCAGCATTTTCCTGTGGACGAGACATGGTGCATGTTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp AAGGGGGCCACACAGTGCCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTTAGACGGGGCACCCGTTaGTGGTGTGGAAGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: KGATQCPSTQSHSSHSSLRRGTR*WCGRKE
Trigger: TTCCTTCCTTCCACACCACCAACGGGTGCCCCGTCT...AAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTGGCCCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp AAGGGGGCCACACAGTGCCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTTGGAGGGCATAGCCCATaGCCAATCAGAGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: KGATQCPSTQSHSSHSSLGGHSP*PIRGAG
Trigger: ACCTGCTCCTCTGATTGGCCATGGGCTATGCCCTCC...AAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTGGCCCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp GCAACAACATGCACCATGTCTCGTCCACAGGAAAATGCTGGGCTACCACAACTGCTCCTTCCTGGGGGTTaGCAGAGCACCCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: ATTCTMSRPQENAGLPQLLLPGG*QSTPSS
Trigger: GGAGCTTGGGGTGCTCTGCCAACCCCCAGGAAGGAG...CAGTTGTGGTAGCCCAGCATTTTCCTGTGGACGAGACATGGTGCATGTTGTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp TTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGACCAAGTTCTAGTCCTTaGGCACATTTTGCTACCTTG +
Preference number: 4 (lower is better)
Translates to: FLGWVGDGDGAPVGGVEGPSSSP*AHFATL
Trigger: CAAGGTAGCAAAATGTGCCCAAGGACTAGAACTTGG...TCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp CAGATCTCTAAGCCTCTATTGTTGGCTGGCGAGGGAGGGAAGAACATCAAGTTATGCCTCCCTCGGCCCTaGACGGAGGAGACCCACGAG +
Preference number: 4 (lower is better)
Translates to: QISKPLLLAGEGGKNIKLCLPRP*TEETHE
Trigger: CTCGTGGGTCTCCTCCGTCCAGGGCCGAGGGAGGCA...TAACTTGATGTTCTTCCCTCCCTCGCCAGCCAACAATAGAGGCTTAGAGATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp CAGCTAGGACTGGTGCTGCCCCAGCGAGCGTTGGGGTCTTTCTTGGCAAGCTGTGAGAATGGGGTGAAGTaGGACCTACACTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: QLGLVLPQRALGSFLASCENGVK*DLHSAE
Trigger: TTCAGCAGAGTGTAGGTCCCACTTCACCCCATTCTC...ACAGCTTGCCAAGAAAGACCCCAACGCTCGCTGGGGCAGCACCAGTCCTAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp AGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCGGTATAAAGTCTCCCTaGGTGGGGCTAAAAATCAGG +
Preference number: 4 (lower is better)
Translates to: REGRESLCGVASNPTPRGGIKSP*VGLKIR
Trigger: CCTGATTTTTAGCCCCACCCAGGGAGACTTTATACC...GCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CAA 72 bp GCCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTaGGGGGATGCTGGCTCAGATCAATACCCCGACTGG +
Preference number: 4 (lower is better)
Translates to: ALQRSPTQAIQV*GDAGSDQYPDW
Trigger: CCAGTCGGGGTATTGATCTGAGCCAGCATCCCCCAAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp AAGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTGTCTCTCGTCTTaGAGAAGGATTCGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: KGGQRKSVWCGFEPHSEGPCLSS*RRIRSH
Trigger: ATGAGACCGAATCCTTCTTCAAGACGAGAGACAAGG...CCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR GCA 90 bp CAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGAATCCAGCAACAACATaGACCATGTCTCGTCCACAG +
Preference number: 4 (lower is better)
Translates to: QRKSVWCGFEPHSEGPSWNPATT*TMSRPQ
Trigger: CTGTGGACGAGACATGGTGCATGTTGTTGCTGGATT...CCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp CGGGGGACAGGAATGGGTTCCATTCAATCCAGCAACAACATGCACCATGTCTCGAGCCCCTTCAAGAGGTaGATGTTGGAGCCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: RGTGMGSIQSSNNMHHVSSPFKR*MLEPRS
Trigger: CGACCTGGGCTCCAACATCCACCTCTTGAAGGGGCT...CGAGACATGGTGCATGTTGTTGCTGGATTGAATGGAACCCATTCCTGTCCCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp AGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCTACGCTCTTTCTTTTTaGGGACCACCTGGAAGATCT +
Preference number: 4 (lower is better)
Translates to: REGRESLCGVASNPTPRGYALSF*GPPGRS
Trigger: AGATCTTCCAGGTGGTCCCCAAAAAGAAAGAGCGTA...GCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp AAGGGGGCCACACAGTGCCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTTGCCGGGGGACAGGAATaGGTTCCATTCAATCCAGCA +
Preference number: 4 (lower is better)
Translates to: KGATQCPSTQSHSSHSSLAGGQE*VPFNPA
Trigger: TGCTGGATTGAATGGAACCCATTCCTGTCCCCCGGC...AAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTGGCCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp AAGGGGGCCACACAGTGCCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTTGATGCTAGACCCAGCTaGCAGACAACAGCAACGGTG +
Preference number: 4 (lower is better)
Translates to: KGATQCPSTQSHSSHSSLDARPS*QTTATV
Trigger: CACCGTTGCTGTTGTCTGCCAGCTGGGTCTAGCATC...AAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTGGCCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp GCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGTCCTGCCTTCCACAATaGTATAAGGCAAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: AEKVCVVWLRTPLRGAFLSCLPQ*YKASCF
Trigger: AAAGCAGCTTGCCTTATATCATTGTGGAAGGCAGGA...CAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp CACACAGTGCCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTTGGGGGATGTTTGCCTCATTTCTTTaGGGGCTTGGGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: HTVPFNAVPLKPFKSWGMFASFL*GLGREG
Trigger: CCCTTCCCTCCCAAGCCCTCAAAGAAATGAGGCAAA...CATCCCCCAAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp AAGGGGGCCACACAGTGCCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTTCTACCCAGTCAGTGCTaGCACACAGATCACCCTAAC +
Preference number: 4 (lower is better)
Translates to: KGATQCPSTQSHSSHSSLLPSQC*HTDHPN
Trigger: GTTAGGGTGATCTGTGTGGCAGCACTGACTGGGTAG...AAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTGGCCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp CACACAGTGCCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTTGGGGGATGCAGAGAAAGTCTGTGTaGTGTGGCTTCGAACCCCAC +
Preference number: 4 (lower is better)
Translates to: HTVPFNAVPLKPFKSWGMQRKSV*CGFEPH
Trigger: GTGGGGTTCGAAGCCACACCACACAGACTTTCTCTG...CATCCCCCAAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp GTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGAAGGAAGCAAAGGATTCGGTCTCATaGATCAAGTTGCCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: VGDGDGAPVGGVEGRKEAKDSVS*IKLPKF
Trigger: AAACTTGGGCAACTTGATCCATGAGACCGAATCCTT...TGCTTCCTTCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp GCAACAACATGCACCATGTCTCGTCCACAGGAAAATGCTGGGCTACCACAACTGTCAAGAGGTGGATGTTaGAGCCCAGGTCGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: ATTCTMSRPQENAGLPQLSRGGC*SPGRPA
Trigger: TGCGGGACGACCTGGGCTCCAACATCCACCTCTTGA...CAGTTGTGGTAGCCCAGCATTTTCCTGTGGACGAGACATGGTGCATGTTGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp GAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCCCTAGGAATAATTCTTTaGAGCTCAAAGTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: EKVCVVWLRTPLRGAFLALGIIL*SSKWLS
Trigger: GCTGAGCCACTTTGAGCTCCAAAGAATTATTCCTAG...GGCCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp CAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCAGCTTTACAAAGGATaGACCAATTCGTCCCAGCTA +
Preference number: 4 (lower is better)
Translates to: QRKSVWCGFEPHSEGPSWQLYKG*TNSSQL
Trigger: TAGCTGGGACGAATTGGTCCATCCTTTGTAAAGCTG...CCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp AAGGGGGCCACACAGTGCCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTTCTCTCCCAACGCAACTaGGTTGGAAATGGATCTCGG +
Preference number: 4 (lower is better)
Translates to: KGATQCPSTQSHSSHSSLLSQRN*VGNGSR
Trigger: CCGAGATCCATTTCCAACCCAGTTGCGTTGGGAGAG...AAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTGGCCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp AGACTCCCCACTCCAGGAGAGAGCTCTTCTAGAGCCAGAGCTTGGTGTCTCAAGTCTAGAGCCAGAGCTTaGTGTCTCAAGGGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: RLPTPGESSSRARAWCLKSRARA*CLKGED
Trigger: GTCTTCCCCCTTGAGACACCAAGCTCTGGCTCTAGA...CTTGAGACACCAAGCTCTGGCTCTAGAAGAGCTCTCTCCTGGAGTGGGGAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp TGGAGAACAATAGAAATTGACAGCACCATTCCTTGGGTGGGTGGGGGATGGAGAGTGTCCACCATGGTCTaGAGGTTCATGCGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: WRTIEIDSTIPWVGGGWRVSTMV*RFMRLA
Trigger: CGCCAAGCGCATGAACCTTCAGACCATGGTGGACAC...TCTCCATCCCCCACCCACCCAAGGAATGGTGCTGTCAATTTCTATTGTTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp CAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGTCTCATGGATCAAGTTaGCCAAGTTTTCCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: QRKSVWCGFEPHSEGPSWSHGSS*PSFPLA
Trigger: AGCAAGAGGAAAACTTGGGCAACTTGATCCATGAGA...CCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CCA 90 bp TGGAGAACAATAGAAATTGACAGCACCATTCCTTGGGTGGGTGGGGGATGGAGAAGACGGGGCACCCGTTaGTGGTGTGGAAGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: WRTIEIDSTIPWVGGGWRRRGTR*WCGRKE
Trigger: TTCCTTCCTTCCACACCACCAACGGGTGCCCCGTCT...TCTCCATCCCCCACCCACCCAAGGAATGGTGCTGTCAATTTCTATTGTTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355609.8
ENST00000455833.7
CDS-3UTR CCA 90 bp ACCACGGCCGGTTGGCCCGGCCCTCAGCTTAGAGTTCTGTATAAAAACACCTGCCTTTGGAGCTCAAAGTaGCTCAGCTTAAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TTAGWPGPQLRVLYKNTCLWSSK*LSLREK
Trigger: CTTCTCCCTTAAGCTGAGCCACTTTGAGCTCCAAAG...GCAGGTGTTTTTATACAGAACTCTAAGCTGAGGGCCGGGCCAACCGGCCGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp CGGGGGACAGGAATGGGTTCCATTCAATCCAGCAACAACATGCACCATGTCTCGCAAAGCCTGCTCAGCTaGCTCCAAGCTGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: RGTGMGSIQSSNNMHHVSQSLLS*LQAEIW
Trigger: CCAAATCTCAGCTTGGAGCCAGCTGAGCAGGCTTTG...CGAGACATGGTGCATGTTGTTGCTGGATTGAATGGAACCCATTCCTGTCCCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp GCAACAACATGCACCATGTCTCGTCCACAGGAAAATGCTGGGCTACCACAACTGAGACACAGCCGGGGCTaGGCTATGAGCATCTTAAGC +
Preference number: 4 (lower is better)
Translates to: ATTCTMSRPQENAGLPQLRHSRG*AMSILS
Trigger: GCTTAAGATGCTCATAGCCCAGCCCCGGCTGTGTCT...CAGTTGTGGTAGCCCAGCATTTTCCTGTGGACGAGACATGGTGCATGTTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp GCAACAACATGCACCATGTCTCGTCCACAGGAAAATGCTGGGCTACCACAACTGACACTACCCAGTCAGTaGTGCCACACAGATCACCCT +
Preference number: 4 (lower is better)
Translates to: ATTCTMSRPQENAGLPQLTLPSQ*CHTDHP
Trigger: AGGGTGATCTGTGTGGCAGCACTGACTGGGTAGTGT...CAGTTGTGGTAGCCCAGCATTTTCCTGTGGACGAGACATGGTGCATGTTGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR TCA 90 bp ACTTTCTCACAGAGAAATTACAGATCTCTAAGCCTCTATTGTTGGCTGGCGAGGCAGCTGGCTCCAAGCTaGGATTTGGAAGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: TFSQRNYRSLSLYCWLARQLAPS*DLEGGH
Trigger: GTGGCCCCCTTCCAAATCTCAGCTTGGAGCCAGCTG...CCTCGCCAGCCAACAATAGAGGCTTAGAGATCTGTAATTTCTCTGTGAGAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR GCA 90 bp CAGATCTCTAAGCCTCTATTGTTGGCTGGCGAGGGAGGGAAGAACATCAAGTTATCCAAGGAAGTCGTGTaGTCCCACTGTCACCCATGC +
Preference number: 4 (lower is better)
Translates to: QISKPLLLAGEGGKNIKLSKEVV*SHCHPC
Trigger: GCATGGGTGACAGTGGGAGCACACGACTTCCTTGGA...TAACTTGATGTTCTTCCCTCCCTCGCCAGCCAACAATAGAGGCTTAGAGATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp TGGAGAACAATAGAAATTGACAGCACCATTCCTTGGGTGGGTGGGGGATGGAGAGGTTCATGTCACTTTTaGCTGTGGCCAGCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: WRTIEIDSTIPWVGGGWRGSCHF*LWPARA
Trigger: AGCTCGAGCTGGCCACAGCCAAAAGTGACATGAACC...TCTCCATCCCCCACCCACCCAAGGAATGGTGCTGTCAATTTCTATTGTTCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355609.8
ENST00000455833.7
CDS-3UTR CCA 90 bp ACTTTCTCACAGAGAAATTACAGATCTCTAAGCCTCTATTGTTGGCTGGCGAGGAAGGCCACGGACCCCTaGGGACCACAATCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: TFSQRNYRSLSLYCWLARKATDP*GPQSQS
Trigger: TGACTGGGATTGTGGTCCCCAGGGGTCCGTGGCCTT...CCTCGCCAGCCAACAATAGAGGCTTAGAGATCTGTAATTTCTCTGTGAGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp TGCAAAAACATCCACAAGGGGTCTTGCAGGGAAGGGCTTTGCCTCATTTCTTTGAAAGTCTGTGTGGTGTaGCTTCGAACCCCACTCCGA +
Preference number: 4 (lower is better)
Translates to: CKNIHKGSCREGLCLISLKVCVV*LRTPLR
Trigger: TCGGAGTGGGGTTCGAAGCCACACCACACAGACTTT...CAAAGAAATGAGGCAAAGCCCTTCCCTGCAAGACCCCTTGTGGATGTTTTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CCA 90 bp TGGAGAACAATAGAAATTGACAGCACCATTCCTTGGGTGGGTGGGGGATGGAGACGCTCGAACTCATCCTaGATCTCATCTGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: WRTIEIDSTIPWVGGGWRRSNSS*ISSVLP
Trigger: AGGAAGTACAGATGAGATCCAGGATGAGTTCGAGCG...TCTCCATCCCCCACCCACCCAAGGAATGGTGCTGTCAATTTCTATTGTTCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355609.8
ENST00000455833.7
CDS-3UTR CCA 90 bp ACTTTCTCACAGAGAAATTACAGATCTCTAAGCCTCTATTGTTGGCTGGCGAGGCTTCCAGAGAGAATCTaGCTTTACCTGCACCCACCC +
Preference number: 4 (lower is better)
Translates to: TFSQRNYRSLSLYCWLARLPERI*LYLHPP
Trigger: GGGTGGGTGCAGGTAAAGCCAGATTCTCTCTGGAAG...CCTCGCCAGCCAACAATAGAGGCTTAGAGATCTGTAATTTCTCTGTGAGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CAA 72 bp CTCACAGAGAAATTACAGATCTCTAAGCCTCTATTGTaGGCTGGCGAGGGAGGGAAGAACATCAAGTTATCA +
Preference number: 4 (lower is better)
Translates to: LTEKLQISKPLL*AGEGGKNIKLS
Trigger: TGATAACTTGATGTTCTTCCCTCCCTCGCCAGCCAACAATAGAGGCTTAGAGATCTGTAATTTCTCTGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
3UTR CAA 72 bp TTTCTCACAGAGAAATTACAGATCTCTAAGCCTCTATaGTTGGCTGGCGAGGGAGGGAAGAACATCAAGTTA +
Preference number: 4 (lower is better)
Translates to: FLTEKLQISKPL*LAGEGGKNIKL
Trigger: TAACTTGATGTTCTTCCCTCCCTCGCCAGCCAACAATAGAGGCTTAGAGATCTGTAATTTCTCTGTGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS CCA 90 bp CCACGCCGCCGCCGCCCGTGCGCCGCACCTGCGTGTAGCTCCAGATaGTCCCGGGCAGGCGGCCGTAGTGCTGCGGGTGCGAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: PRRRRPCAAPACSSR*SRAGGRSAAGASRR
Trigger: GCGGCGGCTCGCACCCGCAGCACTACGGCCGCCTGCCCGGGACCATCTGGAGCTACACGCAGGTGCGGCGCACGGGCGGCGGCGGCGTGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS GCA 90 bp CGGGCTCCAGCGCGGCCGGCCGGGCGGTTCCAGATGCGCGCCAGATaGGGCCTCCGCAGAGACGGCAGGACGGATGGCCCCGGATGCGGG +
Preference number: 5 (lower is better)
Translates to: RAPARPAGRFQMRAR*GLRRDGRTDGPGCG
Trigger: CCCGCATCCGGGGCCATCCGTCCTGCCGTCTCTGCGGAGGCCGCATCTGGCGCGCATCTGGAACCGCCCGGCCGGCCGCGCTGGAGCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS GCA 90 bp CAGGGTGGGCGCGGGCTCCAGCGCGGCCGGCCGGGCGGTTCCAGATaGGCGCCAGATGCGGCCTCCGCAGAGACGGCAGGACGGATGGCC +
Preference number: 5 (lower is better)
Translates to: QGGRGLQRGRPGGSR*APDAASAETAGRMA
Trigger: GGCCATCCGTCCTGCCGTCTCTGCGGAGGCCGCATCTGGCGCGCATCTGGAACCGCCCGGCCGGCCGCGCTGGAGCCCGCGCCCACCCTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS CCA 90 bp GGCGCCGAGGCGAGAGAGGGCACTCGGCCGCTCCTCGGGACGCGGTaGAGGCCGCGGTATCTGCGCGGGGCCAGAAGGGTCGCGGGTCTC +
Preference number: 5 (lower is better)
Translates to: GAEAREGTRPLLGTR*RPRYLRGARRVAGL
Trigger: GAGACCCGCGACCCTTCTGGCCCCGCGCAGATACCGCGGCCTCCACCGCGTCCCGAGGAGCGGCCGAGTGCCCTCTCTCGCCTCGGCGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS GCA 90 bp AGGGCACTCGGCCGCTCCTCGGGACGCGGTGGAGGCCGCGGTATCTaGGCGGGGCCAGAAGGGTCGCGGGTCTCACCGCCCGGGCTGTCA +
Preference number: 5 (lower is better)
Translates to: RALGRSSGRGGGRGI*AGPEGSRVSPPGLS
Trigger: TGACAGCCCGGGCGGTGAGACCCGCGACCCTTCTGGCCCCGCGCAGATACCGCGGCCTCCACCGCGTCCCGAGGAGCGGCCGAGTGCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS GCA 90 bp GCCAGATGCGGCCTCCGCAGAGACGGCAGGACGGATGGCCCCGGATaGGGGCGCCGAGGCGAGAGAGGGCACTCGGCCGCTCCTCGGGAC +
Preference number: 5 (lower is better)
Translates to: ARCGLRRDGRTDGPG*GRRGERGHSAAPRD
Trigger: GTCCCGAGGAGCGGCCGAGTGCCCTCTCTCGCCTCGGCGCCCGCATCCGGGGCCATCCGTCCTGCCGTCTCTGCGGAGGCCGCATCTGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS CCA 90 bp CCAGAAGGGTCGCGGGTCTCACCGCCCGGGCTGTCAGAGACGCTGTaGAGGGGCCGCGGCAGCCGCACGCAGAGGACTCTCGGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: PEGSRVSPPGLSETL*RGRGSRTQRTLGRH
Trigger: GTGCCGGCCGAGAGTCCTCTGCGTGCGGCTGCCGCGGCCCCTCCACAGCGTCTCTGACAGCCCGGGCGGTGAGACCCGCGACCCTTCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp GGTCCGGAAGGAAGCAAGCGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCGCTCCTTCCTGGGGGTaGGCAGAGCACCCCAAGCTC +
Preference number: 5 (lower is better)
Translates to: GPEGSKRSGRPVPCGNPSAPSWG*AEHPKL
Trigger: GAGCTTGGGGTGCTCTGCCAACCCCCAGGAAGGAGC...GCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCGCTTGCTTCCTTCCGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp GACAGCACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGGAGACGGGGCACCCGTaGGTGGTGTGGAAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: DSTIPWVGGGWRRGTRWWETGHP*VVWKEG
Trigger: TCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTC...CCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355609.8
ENST00000455833.7
CDS-3UTR CAA 90 bp GGTCCGGAAGGAAGCAAGCGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCACCACCAGCTCGGCCTaGAGCCGCTCGATCTTCTCA +
Preference number: 5 (lower is better)
Translates to: GPEGSKRSGRPVPCGNPSTTSSA*SRSIFS
Trigger: TGAGAAGATCGAGCGGCTCAAGGCCGAGCTGGTGGT...GCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCGCTTGCTTCCTTCCGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp AGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTGTCTGCGGAGCCTTaGATGAGCCGGCGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: REGRESLCGVASNPTPRGLSAEP*MSRRQV
Trigger: GACCTGCCGCCGGCTCATCAAAGGCTCCGCAGACAG...GCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CAA 90 bp TGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGAAGAGACGGGGCACCCGTaGGTGGTGTGGAAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: WVGGGWRRGTRWWCGRKEETGHP*VVWKEG
Trigger: TCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTC...TTCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CAA 90 bp AAGCGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCCTCATGACCAACCTCGAGACGGGGCACCCGTaGGTGGTGTGGAAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: KRSGRPVPCGNPSLMTNLETGHP*VVWKEG
Trigger: TCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTC...GAGGTTGGTCATGAGGCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp ATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGCAGCGGAAGCGCACGTaGAGCCCCTTCAAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: IPWVGGGWRRGTRWWCGRQRKRT*SPFKRW
Trigger: CCACCTCTTGAAGGGGCTCAACGTGCGCTTCCGCTG...CCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS TCA 90 bp CCCCATCACCAAGACCACCAGGCTCGCAGGGCCTCAGTCATCAGCTaGCCATGGGCTCCACATCCGCCTCGCGCTCGAACTCATCCTGGA +
Preference number: 5 (lower is better)
Translates to: PHHQDHQARRASVIS*PWAPHPPRARTHPG
Trigger: TCCAGGATGAGTTCGAGCGCGAGGCGGATGTGGAGCCCATGGTCAGCTGATGACTGAGGCCCTGCGAGCCTGGTGGTCTTGGTGATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CAA 90 bp AGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCCTGTCTGCGGAGCCTTaGATGAGCCGGCGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: RESLCGVASNPTPRGLPGLSAEP*MSRRQV
Trigger: GACCTGCCGCCGGCTCATCAAAGGCTCCGCAGACAG...GCCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CAA 90 bp GGCAAGCGGCTCCTTCCTGGGGGTTGGCAGAGCACCCCAAGCTCCAGGCCGAGTTCCCCTCACAGTGCCTaGTCCCTTCAACTTTGCCAC +
Preference number: 5 (lower is better)
Translates to: GKRLLPGGWQSTPSSRPSSPHSA*SLQLCH
Trigger: GTGGCAAAGTTGAAGGGACAAGGCACTGTGAGGGGA...ACTCGGCCTGGAGCTTGGGGTGCTCTGCCAACCCCCAGGAAGGAGCCGCTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp GGCAAGCGGCTCCTTCCTGGGGGTTGGCAGAGCACCCCAAGCTCCAGGCCGAGTTCTAAGCCTCTATTGTaGGCTGGCGAGGGAGGGAAG +
Preference number: 5 (lower is better)
Translates to: GKRLLPGGWQSTPSSRPSSKPLL*AGEGGK
Trigger: CTTCCCTCCCTCGCCAGCCAACAATAGAGGCTTAGA...ACTCGGCCTGGAGCTTGGGGTGCTCTGCCAACCCCCAGGAAGGAGCCGCTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp GAGGAGAGGTGGCAGGGCCCCATCACCAAGACCACCAGGCTCGCAGGGCCTCAGATCTCTAAGCCTCTATaGTTGGCTGGCGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: EERWQGPITKTTRLAGPQISKPL*LAGEGG
Trigger: CCCTCCCTCGCCAGCCAACAATAGAGGCTTAGAGAT...CTGAGGCCCTGCGAGCCTGGTGGTCTTGGTGATGGGGCCCTGCCACCTCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp GACAGCACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGGCGTTGGGGTCTTTCTaGGCAAGCTGTGGGCTCATG +
Preference number: 5 (lower is better)
Translates to: DSTIPWVGGGWRRGTRWWALGSF*ASCGLM
Trigger: CATGAGCCCACAGCTTGCCAAGAAAGACCCCAACGC...CCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS TCA 90 bp GCATCAGCCTCCTGTGCTGCCTCCTGCAGCGTGTCCACCATGGTCTaGAGGTTCATGCGCTTGGCGAGCTCCTCCTCCCACCTCCGCTTA +
Preference number: 5 (lower is better)
Translates to: ASASCAASCSVSTMV*RFMRLASSSSHLRL
Trigger: TAAGCGGAGGTGGGAGGAGGAGCTCGCCAAGCGCATGAACCTTCAGACCATGGTGGACACGCTGCAGGAGGCAGCACAGGAGGCTGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS GCA 90 bp CCTGTGCTGCCTCCTGCAGCGTGTCCACCATGGTCTGAAGGTTCATaGGCTTGGCGAGCTCCTCCTCCCACCTCCGCTTATACTCGTCGC +
Preference number: 5 (lower is better)
Translates to: PVLPPAACPPWSEGS*AWRAPPPTSAYTRR
Trigger: GCGACGAGTATAAGCGGAGGTGGGAGGAGGAGCTCGCCAAGCGCATGAACCTTCAGACCATGGTGGACACGCTGCAGGAGGCAGCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CAA 90 bp TCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAACGGTTCATGTCACTTTaGGCTGTGGCCAGCTCGAGC +
Preference number: 5 (lower is better)
Translates to: SLGGWGMETGHPLVVWKERFMSL*AVASSS
Trigger: GCTCGAGCTGGCCACAGCCAAAAGTGACATGAACCG...TTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CAA 90 bp AGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCACCACCAGCTCGGCCTaGAGCCGCTCGATCTTCTCA +
Preference number: 5 (lower is better)
Translates to: REGRESLCGVASNPTPRGTTSSA*SRSIFS
Trigger: TGAGAAGATCGAGCGGCTCAAGGCCGAGCTGGTGGT...GCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CAA 90 bp GAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCCACTGCTGAGAGCGGCTaGCGTGTGTCGAGGAGCAGA +
Preference number: 5 (lower is better)
Translates to: EKVCVVWLRTPLRGAFLATAESG*RVSRSR
Trigger: TCTGCTCCTCGACACACGCAAGCCGCTCTCAGCAGT...GGCCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp GCAGCCAAAAGCAGGCAACTGCCGGACAGTCCTAACCCAAGGCGGGTAGAAGGGCTGCCCCAGCGAGCGTaGGGGTCTTTCTTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: AAKSRQLPDSPNPRRVEGLPQRA*GSFLAS
Trigger: GCTTGCCAAGAAAGACCCCAACGCTCGCTGGGGCAG...CCCTTCTACCCGCCTTGGGTTAGGACTGTCCGGCAGTTGCCTGCTTTTGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS GCA 90 bp CGCGCTCGAACTCATCCTGGATCTCATCTGTACTTCCTGAGTCGCTaGTGGCCACGGAGCTGGGGGACGGTGAATTCCTGTCTGCGGAGC +
Preference number: 5 (lower is better)
Translates to: RARTHPGSHLYFLSR*WPRSWGTVNSCLRS
Trigger: GCTCCGCAGACAGGAATTCACCGTCCCCCAGCTCCGTGGCCAGCAGCGACTCAGGAAGTACAGATGAGATCCAGGATGAGTTCGAGCGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS CCA 90 bp CAGCTGACCATGGGCTCCACATCCGCCTCGCGCTCGAACTCATCCTaGATCTCATCTGTACTTCCTGAGTCGCTGCTGGCCACGGAGCTG +
Preference number: 5 (lower is better)
Translates to: QLTMGSTSASRSNSS*ISSVLPESLLATEL
Trigger: CAGCTCCGTGGCCAGCAGCGACTCAGGAAGTACAGATGAGATCCAGGATGAGTTCGAGCGCGAGGCGGATGTGGAGCCCATGGTCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CAA 90 bp AGGCCCAGGCTCCAAGGAAGTCGTGTGCTCCCACTGTCACCCATGCTCTGCTGCCGGTTCATGTCACTTTaGGCTGTGGCCAGCTCGAGC +
Preference number: 5 (lower is better)
Translates to: RPRLQGSRVLPLSPMLCCRFMSL*AVASSS
Trigger: GCTCGAGCTGGCCACAGCCAAAAGTGACATGAACCG...GCAGCAGAGCATGGGTGACAGTGGGAGCACACGACTTCCTTGGAGCCTGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp ATTGACAGCACCATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGGCGACATCGCACAGCTaGGCCGTGATATCGATTCGG +
Preference number: 5 (lower is better)
Translates to: IDSTIPWVGGGWRRGTRWATSHS*AVISIR
Trigger: CCGAATCGATATCACGGCCAAGCTGTGCGATGTCGC...CCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGCTGTCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp GAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCCCAGGGAGTGAGAAAATaGGGGTGGTCCCTACCCAGG +
Preference number: 5 (lower is better)
Translates to: EKVCVVWLRTPLRGAFLAQGVRK*GWSLPR
Trigger: CCTGGGTAGGGACCACCCCAATTTTCTCACTCCCTG...GGCCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp AAGCGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCCTCATGACCAACCTCTGGGAGGGAAGGGTCTaGGTGAGGGATTTGCTCAGA +
Preference number: 5 (lower is better)
Translates to: KRSGRPVPCGNPSLMTNLWEGRV*VRDLLR
Trigger: TCTGAGCAAATCCCTCACCAAGACCCTTCCCTCCCA...GAGGTTGGTCATGAGGCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp AAGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCGGTTCATGTCACTTTaGGCTGTGGCCAGCTCGAGC +
Preference number: 5 (lower is better)
Translates to: KGGQRKSVWCGFEPHSEGRFMSL*AVASSS
Trigger: GCTCGAGCTGGCCACAGCCAAAAGTGACATGAACCG...CCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CAA 90 bp AGGAAGCAAGCGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCCTCATGACAGGTCGATGGTCGGATaGCAGTTGGTGAAATCCTCC +
Preference number: 5 (lower is better)
Translates to: RKQAVREASALREPQPHDRSMVG*QLVKSS
Trigger: GGAGGATTTCACCAACTGCAATCCGACCATCGACCT...GTCATGAGGCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCGCTTGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp CCCATGAGGAGAGGTGGCAGGGCCCCATCACCAAGACCACCAGGCTCGCAGGGCGTCTCATGGATCAAGTaGCCCAAGTTTTCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: PMRRGGRAPSPRPPGSQGVSWIK*PKFSSC
Trigger: GCAAGAGGAAAACTTGGGCAACTTGATCCATGAGAC...GCCCTGCGAGCCTGGTGGTCTTGGTGATGGGGCCCTGCCACCTCTCCTCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CAA 90 bp CGGTCAGGGAGGCCAGTGCCTTGCGGGAACCCCAGCCTCATGACCAACCTCGGCGTCTCATGGATCAAGTaGCCCAAGTTTTCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: RSGRPVPCGNPSLMTNLGVSWIK*PKFSSC
Trigger: GCAAGAGGAAAACTTGGGCAACTTGATCCATGAGAC...GCCGAGGTTGGTCATGAGGCTGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp AGGCAGGCCGGACCCAGGAACCAGCCCAGGAGGCAGGCCCATCACACTCTGGCTTTACGCTCTTTCTTTTaGGGGACCACCTGGAAGATC +
Preference number: 5 (lower is better)
Translates to: RQAGPRNQPRRQAHHTLALRSFF*GTTWKI
Trigger: GATCTTCCAGGTGGTCCCCAAAAAGAAAGAGCGTAA...AGCCAGAGTGTGATGGGCCTGCCTCCTGGGCTGGTTCCTGGGTCCGGCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp CATTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGCACATTTTGCTACCTaGACCACTAGAGGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: HSLGGWGMETGHPLVVWKAHFAT*TTRGSS
Trigger: GGAGCTCCCTCTAGTGGTCAAGGTAGCAAAATGTGC...CTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp GTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGAAGGAAGCACCCAACGCAACTGGGTaGGAAATGGATCTCGGCAGA +
Preference number: 5 (lower is better)
Translates to: VGDGDGAPVGGVEGRKEAPNATG*EMDLGR
Trigger: TCTGCCGAGATCCATTTCCAACCCAGTTGCGTTGGG...TGCTTCCTTCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS CCA 90 bp GCTCGAACTCATCCTGGATCTCATCTGTACTTCCTGAGTCGCTGCTaGCCACGGAGCTGGGGGACGGTGAATTCCTGTCTGCGGAGCCTT +
Preference number: 5 (lower is better)
Translates to: ARTHPGSHLYFLSRC*PRSWGTVNSCLRSL
Trigger: AAGGCTCCGCAGACAGGAATTCACCGTCCCCCAGCTCCGTGGCCAGCAGCGACTCAGGAAGTACAGATGAGATCCAGGATGAGTTCGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CAA 90 bp GAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCCATGGTCGGATTGCAGTaGGTGAAATCCTCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: EKVCVVWLRTPLRGAFLAMVGLQ*VKSSQS
Trigger: GCTCTGGGAGGATTTCACCAACTGCAATCCGACCAT...GGCCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CAA 90 bp AGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCAGGTCGATGGTCGGATaGCAGTTGGTGAAATCCTCC +
Preference number: 5 (lower is better)
Translates to: REGRESLCGVASNPTPRGRSMVG*QLVKSS
Trigger: GGAGGATTTCACCAACTGCAATCCGACCATCGACCT...GCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS GCA 90 bp TTGGGGACCACCTGGAAGATCTTGGACACGTCTTCTGAGTTCCGCTaGTGTGCGACATCGCACAGCTTGGCCGTGATATCGATTCGGCGG +
Preference number: 5 (lower is better)
Translates to: LGTTWKILDTSSEFR*CATSHSLAVISIRR
Trigger: CCGCCGAATCGATATCACGGCCAAGCTGTGCGATGTCGCACAGCAGCGGAACTCAGAAGACGTGTCCAAGATCTTCCAGGTGGTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp TTCCTTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGATCCTTGTCTCTCGTCTaGAAGAAGGATTCGGTCTCA +
Preference number: 5 (lower is better)
Translates to: FLGWVGDGDGAPVGGVEGSLSLV*KKDSVS
Trigger: TGAGACCGAATCCTTCTTCAAGACGAGAGACAAGGA...TCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CAA 90 bp AGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCCAAGCCATTCAAGTCTaGGGGGATGCTGGCTCAGAT +
Preference number: 5 (lower is better)
Translates to: RESLCGVASNPTPRGLPGQAIQV*GDAGSD
Trigger: ATCTGAGCCAGCATCCCCCAAGACTTGAATGGCTTG...GCCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp AAGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCTTTGCCTCATTTCTTaGAGGGCTTGGGAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: KGGQRKSVWCGFEPHSEGLCLIS*RAWEGR
Trigger: CCTTCCCTCCCAAGCCCTCAAAGAAATGAGGCAAAG...CCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp TTGGGTGGGTGGGGGATGGAGACGGGGCACCCGTTGGTGGTGTGGAAGGAAGGATTACGCTCTTTCTTTTaGGGGACCACGTCACTCATA +
Preference number: 5 (lower is better)
Translates to: LGGWGMETGHPLVVWKEGLRSFF*GTTSLI
Trigger: TATGAGTGACGTGGTCCCCAAAAAGAAAGAGCGTAA...TCCTTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000416166.1
CDS-3UTR CAA 90 bp AGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCGTTTCCTGGTACTCCTaGTCTCTCGTCTTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: REGRESLCGVASNPTPRGVSWYS*SLVLKK
Trigger: CTTCTTCAAGACGAGAGACAAGGAGTACCAGGAAAC...GCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CAA 90 bp GAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGCCTTCCTGGCCCCGCTAGGAATAATTCTTaGGAGCTCAAAGTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: ESLCGVASNPTPRGLPGPARNNS*ELKVAQ
Trigger: CTGAGCCACTTTGAGCTCCAAAGAATTATTCCTAGC...GGGGCCAGGAAGGCCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS GCA 90 bp ATGGAGCCGACCTCATCGTCCGAGAACCGGTTCACCTCCCCGTCCTaGTCAGAGATGTCATCATCGGAAGCCACCTTACGCTCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: MEPTSSSENRFTSPS*SEMSSSEATLRSFF
Trigger: AAAGAAAGAGCGTAAGGTGGCTTCCGATGATGACATCTCTGAGCAGGACGGGGAGGTGAACCGGTTCTCGGACGATGAGGTCGGCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CAA 90 bp AAGGGAGGGCAGAGAAAGTCTGTGTGGTGTGGCTTCGAACCCCACTCCGAGGGGTCCTTGTCTCTCGTCTaGAAGAAGGATTCGGTCTCA +
Preference number: 5 (lower is better)
Translates to: KGGQRKSVWCGFEPHSEGSLSLV*KKDSVS
Trigger: TGAGACCGAATCCTTCTTCAAGACGAGAGACAAGGA...CCCCTCGGAGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CAA 90 bp AAGGGGGCCACACAGTGCCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTTATGGTCGGATTGCAGTaGGTGAAATCCTCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: KGATQCPSTQSHSSHSSLMVGLQ*VKSSQS
Trigger: GCTCTGGGAGGATTTCACCAACTGCAATCCGACCAT...AAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTGGCCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp AACCCACACTACCCAGTCAGTGCTGCCACACAGATCACCCTAACCCCGGCCTCTCCTTTTCTTGGATCTTaGTGTCCAGGTCTGTCATGG +
Preference number: 5 (lower is better)
Translates to: NPHYPVSAATQITLTPASPFLGS*CPGLSW
Trigger: CCATGACAGACCTGGACACAAAGATCCAAGAAAAGG...AGAGGCCGGGGTTAGGGTGATCTGTGTGGCAGCACTGACTGGGTAGTGTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS TCA 90 bp CTCTTTCTTTTTGGGGACCACCTGGAAGATCTTGGACACGTCTTCTaGGTTCCGCTGCTGTGCGACATCGCACAGCTTGGCCGTGATATC +
Preference number: 5 (lower is better)
Translates to: LFLFGDHLEDLGHVF*VPLLCDIAQLGRDI
Trigger: GATATCACGGCCAAGCTGTGCGATGTCGCACAGCAGCGGAACTCAGAAGACGTGTCCAAGATCTTCCAGGTGGTCCCCAAAAAGAAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp CAGATCTCTAAGCCTCTATTGTTGGCTGGCGAGGGAGGGAAGAACATCAAGTTATTCAAGAGGTGGATGTaGGAGCCCAGGTCGTCCCGC +
Preference number: 5 (lower is better)
Translates to: QISKPLLLAGEGGKNIKLFKRWM*EPRSSR
Trigger: GCGGGACGACCTGGGCTCCAACATCCACCTCTTGAA...TAACTTGATGTTCTTCCCTCCCTCGCCAGCCAACAATAGAGGCTTAGAGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp ACCACGGCCGGTTGGCCCGGCCCTCAGCTTAGAGTTCTGTATAAAAACACCTGCTCTCTTCCAAAACCATaGTCCCTCCAAGTACCTGTC +
Preference number: 5 (lower is better)
Translates to: TTAGWPGPQLRVLYKNTCSLPKP*SLQVPV
Trigger: GACAGGTACTTGGAGGGACAATGGTTTTGGAAGAGA...GCAGGTGTTTTTATACAGAACTCTAAGCTGAGGGCCGGGCCAACCGGCCGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS CCA 90 bp TCCTGGTACTCCTTGTCTCTCGTCTTGAAGAAGGATTCGGTCTCATaGATCAAGTTGCCCAAGTTTTCCTCTTGCTCGCCCTGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: SWYSLSLVLKKDSVS*IKLPKFSSCSPCRS
Trigger: CGACCTGCAGGGCGAGCAAGAGGAAAACTTGGGCAACTTGATCCATGAGACCGAATCCTTCTTCAAGACGAGAGACAAGGAGTACCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CAA 90 bp CACACAGTGCCCTTCAACGCAGTCCCACTCAAGCCATTCAAGTCTTGGGGGATGGTTTCCTGGTACTCCTaGTCTCTCGTCTTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: HTVPFNAVPLKPFKSWGMVSWYS*SLVLKK
Trigger: CTTCTTCAAGACGAGAGACAAGGAGTACCAGGAAAC...CATCCCCCAAGACTTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp AGACTCCCCACTCCAGGAGAGAGCTCTTCTAGAGCCAGAGCTTGGTGTCTCAAGGTCTTGGTGAGGGATTaGCTCAGAACTAACACACAG +
Preference number: 5 (lower is better)
Translates to: RLPTPGESSSRARAWCLKVLVRD*LRTNTQ
Trigger: CTGTGTGTTAGTTCTGAGCAAATCCCTCACCAAGAC...CTTGAGACACCAAGCTCTGGCTCTAGAAGAGCTCTCTCCTGGAGTGGGGAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp TGCAAAAACATCCACAAGGGGTCTTGCAGGGAAGGGCTTTGCCTCATTTCTTTGCATCCACAAGGGGTCTaGCAGGGAAGGGCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: CKNIHKGSCREGLCLISLHPQGV*QGRALP
Trigger: AGGCAAAGCCCTTCCCTGCAAGACCCCTTGTGGATG...CAAAGAAATGAGGCAAAGCCCTTCCCTGCAAGACCCCTTGTGGATGTTTTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp CAGCTAGGACTGGTGCTGCCCCAGCGAGCGTTGGGGTCTTTCTTGGCAAGCTGTAAGAATCAGGTATGTTaGAACCCTGTAACCTTTAGA +
Preference number: 5 (lower is better)
Translates to: QLGLVLPQRALGSFLASCKNQVC*NPVTFR
Trigger: TCTAAAGGTTACAGGGTTCAAACATACCTGATTCTT...ACAGCTTGCCAAGAAAGACCCCAACGCTCGCTGGGGCAGCACCAGTCCTAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS TCA 90 bp GCTCGATCTGACCTATCGTTTCCTGGTACTCCTTGTCTCTCGTCTTaGAGAAGGATTCGGTCTCATGGATCAAGTTGCCCAAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: ARSDLSFPGTPCLSS*RRIRSHGSSCPSFP
Trigger: AGGAAAACTTGGGCAACTTGATCCATGAGACCGAATCCTTCTTCAAGACGAGAGACAAGGAGTACCAGGAAACGATAGGTCAGATCGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS-3UTR CAA 90 bp CTGCAGTTTTCAAACTCCCTAGAGTACCCTAGTCCTCAAAGACAAATGACCTATAACTCCCATACCACATaGTCCAATGCCTCCCTCGGC +
Preference number: 5 (lower is better)
Translates to: LQFSNSLEYPSPQRQMTYNSHTT*SNASLG
Trigger: GCCGAGGGAGGCATTGGACAATGTGGTATGGGAGTT...ATAGGTCATTTGTCTTTGAGGACTAGGGTACTCTAGGGAGTTTGAAAACTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp ACTTTCTCACAGAGAAATTACAGATCTCTAAGCCTCTATTGTTGGCTGGCGAGGACCACCTGGAAGATCTaGGACACGTCTTCTGAGTTC +
Preference number: 5 (lower is better)
Translates to: TFSQRNYRSLSLYCWLARTTWKI*DTSSEF
Trigger: GAACTCAGAAGACGTGTCCAAGATCTTCCAGGTGGT...CCTCGCCAGCCAACAATAGAGGCTTAGAGATCTGTAATTTCTCTGTGAGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS-3UTR CAA 90 bp TGCAAAAACATCCACAAGGGGTCTTGCAGGGAAGGGCTTTGCCTCATTTCTTTGAGTACAGTAAACAGGTaGGTTTCCGGTAGGATCAGT +
Preference number: 5 (lower is better)
Translates to: CKNIHKGSCREGLCLISLSTVNR*VSGRIS
Trigger: ACTGATCCTACCGGAAACCAACCTGTTTACTGTACT...CAAAGAAATGAGGCAAAGCCCTTCCCTGCAAGACCCCTTGTGGATGTTTTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS GCA 72 bp GGCCGCTCCTCGGGACGCGGTGGAGGCCGCGGTATCTaGGCGGGGCCAGAAGGGTCGCGGGTCTCACCGCCC +
Preference number: 6 (lower is better)
Translates to: GRSSGRGGGRGI*AGPEGSRVSPP
Trigger: GGGCGGTGAGACCCGCGACCCTTCTGGCCCCGCGCAGATACCGCGGCCTCCACCGCGTCCCGAGGAGCGGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS GCA 72 bp CGCGGGCTCCAGCGCGGCCGGCCGGGCGGTTCCAGATaGGCGCCAGATGCGGCCTCCGCAGAGACGGCAGGA +
Preference number: 6 (lower is better)
Translates to: RGLQRGRPGGSR*APDAASAETAG
Trigger: TCCTGCCGTCTCTGCGGAGGCCGCATCTGGCGCGCATCTGGAACCGCCCGGCCGGCCGCGCTGGAGCCCGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS GCA 72 bp GGCCTCCGCAGAGACGGCAGGACGGATGGCCCCGGATaGGGGCGCCGAGGCGAGAGAGGGCACTCGGCCGCT +
Preference number: 6 (lower is better)
Translates to: GLRRDGRTDGPG*GRRGERGHSAA
Trigger: AGCGGCCGAGTGCCCTCTCTCGCCTCGGCGCCCGCATCCGGGGCCATCCGTCCTGCCGTCTCTGCGGAGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS CCA 72 bp CGCCGCCCGTGCGCCGCACCTGCGTGTAGCTCCAGATaGTCCCGGGCAGGCGGCCGTAGTGCTGCGGGTGCG +
Preference number: 6 (lower is better)
Translates to: RRPCAAPACSSR*SRAGGRSAAGA
Trigger: CGCACCCGCAGCACTACGGCCGCCTGCCCGGGACCATCTGGAGCTACACGCAGGTGCGGCGCACGGGCGGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS GCA 72 bp CCAAGGCCATCTCCCCGAACAGCAGCGAGTTCACCATaGGCCGGCTGCGCGGCTCAGGGCCCCGGGCCCGCG +
Preference number: 6 (lower is better)
Translates to: PRPSPRTAASSP*AGCAAQGPGPA
Trigger: CGCGGGCCCGGGGCCCTGAGCCGCGCAGCCGGCGCATGGTGAACTCGCTGCTGTTCGGGGAGATGGCCTTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS CAA 72 bp CGGAAGCGCACGTTGAGCCCCTTCAAGAGGTGGATGTaGGAGCCCAGGTCGTCCCGCAGCGCCGCCGTCACC +
Preference number: 6 (lower is better)
Translates to: RKRTLSPFKRWM*EPRSSRSAAVT
Trigger: GGTGACGGCGGCGCTGCGGGACGACCTGGGCTCCAACATCCACCTCTTGAAGGGGCTCAACGTGCGCTTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS TCA 72 bp CAAGACCACCAGGCTCGCAGGGCCTCAGTCATCAGCTaGCCATGGGCTCCACATCCGCCTCGCGCTCGAACT +
Preference number: 6 (lower is better)
Translates to: QDHQARRASVIS*PWAPHPPRART
Trigger: AGTTCGAGCGCGAGGCGGATGTGGAGCCCATGGTCAGCTGATGACTGAGGCCCTGCGAGCCTGGTGGTCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355609.8
ENST00000416166.1
ENST00000455833.7
CDS TCA 72 bp TCCTGTGCTGCCTCCTGCAGCGTGTCCACCATGGTCTaGAGGTTCATGCGCTTGGCGAGCTCCTCCTCCCAC +
Preference number: 6 (lower is better)
Translates to: SCAASCSVSTMV*RFMRLASSSSH
Trigger: GTGGGAGGAGGAGCTCGCCAAGCGCATGAACCTTCAGACCATGGTGGACACGCTGCAGGAGGCAGCACAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS CCA 72 bp CAGCCTCCTGTGCTGCCTCCTGCAGCGTGTCCACCATaGTCTGAAGGTTCATGCGCTTGGCGAGCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: QPPVLPPAACPP*SEGSCAWRAPP
Trigger: AGGAGGAGCTCGCCAAGCGCATGAACCTTCAGACCATGGTGGACACGCTGCAGGAGGCAGCACAGGAGGCTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS GCA 72 bp CCTCCTGCAGCGTGTCCACCATGGTCTGAAGGTTCATaGGCTTGGCGAGCTCCTCCTCCCACCTCCGCTTAT +
Preference number: 6 (lower is better)
Translates to: PPAACPPWSEGS*AWRAPPPTSAY
Trigger: ATAAGCGGAGGTGGGAGGAGGAGCTCGCCAAGCGCATGAACCTTCAGACCATGGTGGACACGCTGCAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS GCA 72 bp ACCTCATCGTCCGAGAACCGGTTCACCTCCCCGTCCTaGTCAGAGATGTCATCATCGGAAGCCACCTTACGC +
Preference number: 6 (lower is better)
Translates to: TSSSENRFTSPS*SEMSSSEATLR
Trigger: GCGTAAGGTGGCTTCCGATGATGACATCTCTGAGCAGGACGGGGAGGTGAACCGGTTCTCGGACGATGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS TCA 72 bp TTTGGGGACCACCTGGAAGATCTTGGACACGTCTTCTaGGTTCCGCTGCTGTGCGACATCGCACAGCTTGGC +
Preference number: 6 (lower is better)
Translates to: FGDHLEDLGHVF*VPLLCDIAQLG
Trigger: GCCAAGCTGTGCGATGTCGCACAGCAGCGGAACTCAGAAGACGTGTCCAAGATCTTCCAGGTGGTCCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS CAA 72 bp TTTTCCTCTTGCTCGCCCTGCAGGTCGATGGTCGGATaGCAGTTGGTGAAATCCTCCCAGAGCAGCAGCGTG +
Preference number: 6 (lower is better)
Translates to: FSSCSPCRSMVG*QLVKSSQSSSV
Trigger: CACGCTGCTGCTCTGGGAGGATTTCACCAACTGCAATCCGACCATCGACCTGCAGGGCGAGCAAGAGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS GCA 72 bp ACCTGGAAGATCTTGGACACGTCTTCTGAGTTCCGCTaGTGTGCGACATCGCACAGCTTGGCCGTGATATCG +
Preference number: 6 (lower is better)
Translates to: TWKILDTSSEFR*CATSHSLAVIS
Trigger: CGATATCACGGCCAAGCTGTGCGATGTCGCACAGCAGCGGAACTCAGAAGACGTGTCCAAGATCTTCCAGGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455833.7
CDS CAA 72 bp CTCGTCTTGAAGAAGGATTCGGTCTCATGGATCAAGTaGCCCAAGTTTTCCTCTTGCTCGCCCTGCAGGTCG +
Preference number: 6 (lower is better)
Translates to: LVLKKDSVSWIK*PKFSSCSPCRS
Trigger: CGACCTGCAGGGCGAGCAAGAGGAAAACTTGGGCAACTTGATCCATGAGACCGAATCCTTCTTCAAGACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS CCA 72 bp TCCTTGTCTCTCGTCTTGAAGAAGGATTCGGTCTCATaGATCAAGTTGCCCAAGTTTTCCTCTTGCTCGCCC +
Preference number: 6 (lower is better)
Translates to: SLSLVLKKDSVS*IKLPKFSSCSP
Trigger: GGGCGAGCAAGAGGAAAACTTGGGCAACTTGATCCATGAGACCGAATCCTTCTTCAAGACGAGAGACAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7
CDS TCA 72 bp GACCTATCGTTTCCTGGTACTCCTTGTCTCTCGTCTTaGAGAAGGATTCGGTCTCATGGATCAAGTTGCCCA +
Preference number: 6 (lower is better)
Translates to: DLSFPGTPCLSS*RRIRSHGSSCP
Trigger: TGGGCAACTTGATCCATGAGACCGAATCCTTCTTCAAGACGAGAGACAAGGAGTACCAGGAAACGATAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416166.1
ENST00000455833.7