RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IFFO1 (Homo sapiens)

Ensembl gene IDs: ENSG00000010295

Ensembl transcript IDs: ENST00000336604.8, ENST00000356896.8, ENST00000396840.6, ENST00000465801.5, ENST00000471408.5, ENST00000487279.6, ENST00000488007.5, ENST00000619571.5

Found 699 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCCTCTTCCCACCTTCAGTCGCACAGATCCGGGCTCCCGCCTCCTaGCCGCACCAGAACAGAGCTCGTCGAGCCCGCTGCCCTGCCTCT +
Preference number: 1 (lower is better)
Translates to: LLFPPSVAQIRAPAS*PHQNRARRARCPAS
Trigger: AGAGGCAGGGCAGCGGGCTCGACGAGCTCTGTTCTGGTGCGGGCAGGAGGCGGGAGCCCGGATCTGTGCGACTGAAGGTGGGAAGAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR GCA 90 bp TGGCAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTaGCCCGGCCAGCCCCAACGCCCTCTGCCGCTGACAGGGACAGAA +
Preference number: 1 (lower is better)
Translates to: WQVDSVSTWTIAGTR*PGQPQRPLPLTGTE
Trigger: TTCTGTCCCTGTCAGCGGCAGAGGGCGTTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR CCA 90 bp CACAGCCACATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTaGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAACGCCCT +
Preference number: 1 (lower is better)
Translates to: HSHIHSTWQVDSVST*TIAGTRCPGQPQRP
Trigger: AGGGCGTTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTGGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR CCA 90 bp GCTGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCTCTATCTCATaGAGCTGTCAGATGAGACATCGCGATCGGAGTCCTCAGCCTCGC +
Preference number: 1 (lower is better)
Translates to: AARASGARGRQVSIS*SCQMRHRDRSPQPR
Trigger: GCGAGGCTGAGGACTCCGATCGCGATGTCTCATCTGACAGCTCCATGAGATAGAGACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR GCA 90 bp GACAGGGACAGAAGCCCTCTCCAGCTGCGTGTGCTGCAGAGGCCATaGGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCC +
Preference number: 1 (lower is better)
Translates to: DRDRSPLQLRVLQRP*VASSCILFHSSAWA
Trigger: GGCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGAGGGCTTCTGTCCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR TCA 90 bp GATGGGACCTGGAACATCTGGATCATGTCCTCGCAGTTGCGCTGCTaGGCCACATCGCAGAGCTTGGCGGTGATGTCGATGCGGCGGCAG +
Preference number: 1 (lower is better)
Translates to: DGTWNIWIMSSQLRC*ATSQSLAVMSMRRQ
Trigger: CTGCCGCCGCATCGACATCACCGCCAAGCTCTGCGATGTGGCTCAGCAGCGCAACTGCGAGGACATGATCCAGATGTTCCAGGTCCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR CCA 90 bp GGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTaGTGGAAATGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGA +
Preference number: 1 (lower is better)
Translates to: GSSRHPRVKAGEPQL*WKWPQNGRAKPSSR
Trigger: TCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCATTTCCACCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR TCA 90 bp GCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTaGTACGTGGACAAGGTGAGGGGCCGCAATCGCTCTGGCAGCATT +
Preference number: 1 (lower is better)
Translates to: APDNRDGGKVPHSHS*YVDKVRGRNRSGSI
Trigger: AATGCTGCCAGAGCGATTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR CCA 90 bp CTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTTAGCACCAGTGTaGAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGG +
Preference number: 1 (lower is better)
Translates to: LHSIPLQCLGQLAPV*KTVSWLRTTGMEER
Trigger: CCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTCCACACTGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGAATGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR TCA 90 bp CCATTTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTaGACCGCATCTCCCCAGCTTCTCCAGGCTTTTCCAAGAATCAGG +
Preference number: 1 (lower is better)
Translates to: PFECQLNTASYTEAL*TASPQLLQAFPRIR
Trigger: CCTGATTCTTGGAAAAGCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp CAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCTCGACGGCAGCCTTaGGCTCCCGCTTCCGCCCCC +
Preference number: 2 (lower is better)
Translates to: QVDSVSTWTIAGTRCPGQPRRQP*APASAP
Trigger: GGGGGCGGAAGCGGGAGCGCAAGGCTGCCGTCGAGG...CTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR-3UTR TCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCACTGAGGGAGAAAGCCTaGGGGAGGAGCGCCCCAGTC +
Preference number: 2 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPLREKA*GRSAPV
Trigger: GACTGGGGCGCTCCTCCCTCAGGCTTTCTCCCTCAG...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp GGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCCCAGGGACCGGCCTaGTGCAGAGCTGCAGCTGAT +
Preference number: 2 (lower is better)
Translates to: GGQREHVDHSRDKVPRPAPQGPA*CRAAAD
Trigger: ATCAGCTGCAGCTCTGCACCAGGCCGGTCCCTGGGG...GGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp CTGGCAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCTGAGGGAGAAAGCCTaGGGGAGGAGCGCCCCAGTC +
Preference number: 2 (lower is better)
Translates to: LAGGQREHVDHSRDKVPRLREKA*GRSAPV
Trigger: GACTGGGGCGCTCCTCCCTCAGGCTTTCTCCCTCAG...CCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp CAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGGCAGACACCCACGCGTaGAGGCAGGAGAGCCCCAAC +
Preference number: 2 (lower is better)
Translates to: QVDSVSTWTIAGTRCPGQADTHA*RQESPN
Trigger: GTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGC...CTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAAACGCCCTCTGCCGCTaGCAGGGACAGAAGCCCTCT +
Preference number: 2 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPNALCR*QGQKPS
Trigger: AGAGGGCTTCTGTCCCTGTCAGCGGCAGAGGGCGTT...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp GGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCGTGCAGAGCTGCAGCTaGTGTTCCCCTCTGTGCAGC +
Preference number: 2 (lower is better)
Translates to: GGQREHVDHSRDKVPRPAVQSCS*CSPLCS
Trigger: GCTGCACAGAGGGGAACATCAGCTGCAGCTCTGCAC...GGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp TGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGCTGAGGGAGAAAGCCTaGGGGAGGAGCGCCCCAGTC +
Preference number: 2 (lower is better)
Translates to: WPQNGRAKPSSRHPRALELREKA*GRSAPV
Trigger: GACTGGGGCGCTCCTCCCTCAGGCTTTCTCCCTCAG...CTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAGAAGCCCTCTCCAGCTaGGTGTGCTGCAGAGGCCAT +
Preference number: 2 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPEALSS*VCCRGH
Trigger: ATGGCCTCTGCAGCACACGCAGCTGGAGAGGGCTTC...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp GGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCGTGCTGCAGAGGCCATaGGTAGCCTCCAGCTGCATT +
Preference number: 2 (lower is better)
Translates to: GGQREHVDHSRDKVPRPAVLQRP*VASSCI
Trigger: AATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCAC...GGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGTGCGAGGGCCTCGGGTaGAAGGGGGAGGCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWCEGLG*KGEAGL
Trigger: GAGACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCA...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR-3UTR TCA 90 bp TGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGGTGCAGAGCTGCAGCTaGTGTTCCCCTCTGTGCAGC +
Preference number: 2 (lower is better)
Translates to: WPQNGRAKPSSRHPRALEVQSCS*CSPLCS
Trigger: GCTGCACAGAGGGGAACATCAGCTGCAGCTCTGCAC...CTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp GGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGAGTGCAGAGCTGCAGCTaGTGTTCCCCTCTGTGCAGC +
Preference number: 2 (lower is better)
Translates to: GPRMVGPSLAPDTPEPWRVQSCS*CSPLCS
Trigger: GCTGCACAGAGGGGAACATCAGCTGCAGCTCTGCAC...TCTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGGCAGACACCCACGCGTaGAGGCAGGAGAGCCCCAAC +
Preference number: 2 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWADTHA*RQESPN
Trigger: GTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGC...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp GACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAACAGTGTGGAAGACAGTaGGCTGGCTCCGGACAACAG +
Preference number: 2 (lower is better)
Translates to: DSVSTWTIAGTRCPGQPQQCGRQ*AGSGQQ
Trigger: CTGTTGTCCGGAGCCAGCTCACTGTCTTCCACACTG...TTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp CTGGCAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCTTAAACAGAGACCCTaGGCGCACATACACCCGCGC +
Preference number: 2 (lower is better)
Translates to: LAGGQREHVDHSRDKVPRLKQRP*AHIHPR
Trigger: GCGCGGGTGTATGTGCGCTCAGGGTCTCTGTTTAAG...CCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCATATACCGAGGCATTGTaGACCGCATCTCCCCAGCTT +
Preference number: 2 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPYTEAL*TASPQL
Trigger: AAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATA...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp ATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGGCCACGAAGCCCTCTCCAGCTaGGTGTGCTGCAGAGGCCAT +
Preference number: 2 (lower is better)
Translates to: IPGTKASLKHGTSTREGHEALSS*VCCRGH
Trigger: ATGGCCTCTGCAGCACACGCAGCTGGAGAGGGCTTC...GTGGCCCTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp CTGGCAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGACACCCGCGCACACATaGATGGAGCTTCACCTTCTC +
Preference number: 2 (lower is better)
Translates to: LAGGQREHVDHSRDKVPRTPAHT*MELHLL
Trigger: GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGT...CCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp GACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAAGGAGAGCCCCAACTGTaGTGGAAATGGCCCCAGAAT +
Preference number: 2 (lower is better)
Translates to: DSVSTWTIAGTRCPGQPQGEPQL*WKWPQN
Trigger: ATTCTGGGGCCATTTCCACCACAGTTGGGGCTCTCC...TTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp GACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAATGGAAGACAGTGAGCTaGCTCCGGACAACAGGGATG +
Preference number: 2 (lower is better)
Translates to: DSVSTWTIAGTRCPGQPQWKTVS*LRTTGM
Trigger: CATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTCCA...TTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCACAGTTAGCACCAGTGTaGAAGACAGTGAGCTGGCTC +
Preference number: 2 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPQLAPV*KTVSWL
Trigger: GAGCCAGCTCACTGTCTTCCACACTGGTGCTAACTG...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp CTGGCAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCGCGCACACATGCATaGAGCTTCACCTTCTCTGTC +
Preference number: 2 (lower is better)
Translates to: LAGGQREHVDHSRDKVPRPRTHA*SFTFSV
Trigger: GACAGAGAAGGTGAAGCTCCATGCATGTGTGCGCGG...CCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp GCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCGTGCAGAGCTGCAGCTaGTGTTCCCCTCTGTGCAGC +
Preference number: 2 (lower is better)
Translates to: AEAMRSLQLHSIPLQCLGVQSCS*CSPLCS
Trigger: GCTGCACAGAGGGGAACATCAGCTGCAGCTCTGCAC...GCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCCTGAGGGAGAAAGCCTaGGGGAGGAGCGCCCCAGTC +
Preference number: 2 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSLREKA*GRSAPV
Trigger: GACTGGGGCGCTCCTCCCTCAGGCTTTCTCCCTCAG...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp GAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCAACGCCCTCTGCCGCTaGCAGGGACAGAAGCCCTCT +
Preference number: 2 (lower is better)
Translates to: ETLSAHTPAHTCMELHLLNALCR*QGQKPS
Trigger: AGAGGGCTTCTGTCCCTGTCAGCGGCAGAGGGCGTT...GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp GACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAATCTATTCCACTCCAGTaGCTGGGCCAGTTAGCACCA +
Preference number: 2 (lower is better)
Translates to: DSVSTWTIAGTRCPGQPQSIPLQ*LGQLAP
Trigger: TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGA...TTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGGAAGCCCTCTCCAGCTaGGTGTGCTGCAGAGGCCAT +
Preference number: 2 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWEALSS*VCCRGH
Trigger: ATGGCCTCTGCAGCACACGCAGCTGGAGAGGGCTTC...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp ATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGGCCACTCATGTCCTCGCAGTTaGGCTGCTGAGCCACATCGC +
Preference number: 2 (lower is better)
Translates to: IPGTKASLKHGTSTREGHSCPRS*AAEPHR
Trigger: GCGATGTGGCTCAGCAGCGCAACTGCGAGGACATGA...GTGGCCCTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR-3UTR CCA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCCCCCAGGGACCGGCCTaGTGCAGAGCTGCAGCTGAT +
Preference number: 2 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSPQGPA*CRAAAD
Trigger: ATCAGCTGCAGCTCTGCACCAGGCCGGTCCCTGGGG...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCCCAGGGACCGGCCTaGTGCAGAGCTGCAGCTGAT +
Preference number: 2 (lower is better)
Translates to: SPAACAAEAMRSLQLHSIPQGPA*CRAAAD
Trigger: ATCAGCTGCAGCTCTGCACCAGGCCGGTCCCTGGGG...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp CAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGTCCGGACAACAGGGATaGAGGAAAGGTCCCACATTC +
Preference number: 2 (lower is better)
Translates to: QVDSVSTWTIAGTRCPGQSGQQG*RKGPTF
Trigger: GAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGA...CTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp GACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAATCCGGACAACAGGGATaGAGGAAAGGTCCCACATTC +
Preference number: 2 (lower is better)
Translates to: DSVSTWTIAGTRCPGQPQSGQQG*RKGPTF
Trigger: GAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGA...TTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGACACGGTCTTGCAGCTaGATCCGCACCGTGTACTCC +
Preference number: 2 (lower is better)
Translates to: VPIPGTKASLKHGTSTRETRSCS*IRTVYS
Trigger: GGAGTACACGGTGCGGATCCAGCTGCAAGACCGTGT...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR-3UTR TCA 90 bp ATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGGCCACTGGAGAAGCCAAGACTaGGGGAGAAAGCCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: IPGTKASLKHGTSTREGHWRSQD*GRKPEG
Trigger: TCCCTCAGGCTTTCTCCCTCAGTCTTGGCTTCTCCA...GTGGCCCTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCGATACGTGGACAAGGTaGGGGGCCGCAATCGCTCTG +
Preference number: 2 (lower is better)
Translates to: HSLLYRGIVNRISPASPGDTWTR*GAAIAL
Trigger: CAGAGCGATTGCGGCCCCTCACCTTGTCCACGTATC...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp GACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAACCACATTCACATTCCTaGTACGTGGACAAGGTGAGG +
Preference number: 2 (lower is better)
Translates to: DSVSTWTIAGTRCPGQPQPHSHS*YVDKVR
Trigger: CCTCACCTTGTCCACGTATCAGGAATGTGAATGTGG...TTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGCAGTGTGGAAGACAGTaGGCTGGCTCCGGACAACAG +
Preference number: 2 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWQCGRQ*AGSGQQ
Trigger: CTGTTGTCCGGAGCCAGCTCACTGTCTTCCACACTG...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp GCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTGTGGAAGACAGTaGGCTGGCTCCGGACAACAG +
Preference number: 2 (lower is better)
Translates to: AEAMRSLQLHSIPLQCLGQCGRQ*AGSGQQ
Trigger: CTGTTGTCCGGAGCCAGCTCACTGTCTTCCACACTG...GCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCGAAGCCCTCTCCAGCTaGGTGTGCTGCAGAGGCCAT +
Preference number: 2 (lower is better)
Translates to: HSLLYRGIVNRISPASPGEALSS*VCCRGH
Trigger: ATGGCCTCTGCAGCACACGCAGCTGGAGAGGGCTTC...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCACCCCAGGGACCGGCCTaGTGCAGAGCTGCAGCTGAT +
Preference number: 2 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSPQGPA*CRAAAD
Trigger: ATCAGCTGCAGCTCTGCACCAGGCCGGTCCCTGGGG...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGCAACTGTGGTGGAAATaGCCCCAGAATGGTAGGGCC +
Preference number: 2 (lower is better)
Translates to: VPIPGTKASLKHGTSTREQLWWK*PQNGRA
Trigger: GGCCCTACCATTCTGGGGCCATTTCCACCACAGTTG...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp TGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCTCTATCTCATGGAGCTGTCACAACTGTGGTGGAAATaGCCCCAGAATGGTAGGGCC +
Preference number: 2 (lower is better)
Translates to: CEGLGCKGEAGLYLMELSQLWWK*PQNGRA
Trigger: GGCCCTACCATTCTGGGGCCATTTCCACCACAGTTG...TGACAGCTCCATGAGATAGAGACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR-3UTR CCA 90 bp ATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGGCCACGGAGAGCCCCAACTGTaGTGGAAATGGCCCCAGAAT +
Preference number: 2 (lower is better)
Translates to: IPGTKASLKHGTSTREGHGEPQL*WKWPQN
Trigger: ATTCTGGGGCCATTTCCACCACAGTTGGGGCTCTCC...GTGGCCCTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp ATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGGCCACTGGAAGACAGTGAGCTaGCTCCGGACAACAGGGATG +
Preference number: 2 (lower is better)
Translates to: IPGTKASLKHGTSTREGHWKTVS*LRTTGM
Trigger: CATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTCCA...GTGGCCCTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp CGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTTAGCACCAGTGCAGAGCTGCAGCTaGTGTTCCCCTCTGTGCAGC +
Preference number: 2 (lower is better)
Translates to: RSLQLHSIPLQCLGQLAPVQSCS*CSPLCS
Trigger: GCTGCACAGAGGGGAACATCAGCTGCAGCTCTGCAC...TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp GCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCTGGAGAAGCCAAGACTaGGGGAGAAAGCCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: AEAMRSLQLHSIPLQCLGWRSQD*GRKPEG
Trigger: TCCCTCAGGCTTTCTCCCTCAGTCTTGGCTTCTCCA...GCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTGATACGTGGACAAGGTaGGGGGCCGCAATCGCTCTG +
Preference number: 2 (lower is better)
Translates to: RDPERTYTRAHMHGASPSDTWTR*GAAIAL
Trigger: CAGAGCGATTGCGGCCCCTCACCTTGTCCACGTATC...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCCTTAAACAGAGACCCTaGGCGCACATACACCCGCGC +
Preference number: 2 (lower is better)
Translates to: HSLLYRGIVNRISPASPGLKQRP*AHIHPR
Trigger: GCGCGGGTGTATGTGCGCTCAGGGTCTCTGTTTAAG...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGTTGGTCTCAGTGTATaGCAGACACGGAGGAAGCAC +
Preference number: 2 (lower is better)
Translates to: VPIPGTKASLKHGTSTREVGLSV*QTRRKH
Trigger: GTGCTTCCTCCGTGTCTGTCATACACTGAGACCAAC...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTTCGCAGTTGCGCTGCTaGGCCACATCGCAGAGCTTG +
Preference number: 2 (lower is better)
Translates to: TETLSAHTPAHTCMELHLSQLRC*ATSQSL
Trigger: CAAGCTCTGCGATGTGGCTCAGCAGCGCAACTGCGA...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR-3UTR GCA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCCAGGGACCGGCCTGGTaGAGAGCTGCAGCTGATGTT +
Preference number: 2 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSQGPAW*RAAADV
Trigger: AACATCAGCTGCAGCTCTGCACCAGGCCGGTCCCTG...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGCCCTTCAAAACACTGTaGCCATCCCGGGCACTAAGG +
Preference number: 2 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWPFKTL*PSRALR
Trigger: CCTTAGTGCCCGGGATGGGCACAGTGTTTTGAAGGG...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGCAACTGTGGTGGAAATaGCCCCAGAATGGTAGGGCC +
Preference number: 2 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWQLWWK*PQNGRA
Trigger: GGCCCTACCATTCTGGGGCCATTTCCACCACAGTTG...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp GCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCGGAGAGCCCCAACTGTaGTGGAAATGGCCCCAGAAT +
Preference number: 2 (lower is better)
Translates to: AEAMRSLQLHSIPLQCLGGEPQL*WKWPQN
Trigger: ATTCTGGGGCCATTTCCACCACAGTTGGGGCTCTCC...GCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGTGGAAGACAGTGAGCTaGCTCCGGACAACAGGGATG +
Preference number: 2 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWWKTVS*LRTTGM
Trigger: CATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTCCA...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCGACAGCGTGAGCACGTaGACCATAGCAGGGACAAGG +
Preference number: 2 (lower is better)
Translates to: HSLLYRGIVNRISPASPGDSVST*TIAGTR
Trigger: CCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp CACAGCCACATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTGGACCATAGACAGCGTGAGCACGTaGACCATAGCAGGGACAAGG +
Preference number: 2 (lower is better)
Translates to: HSHIHSTWQVDSVSTWTIDSVST*TIAGTR
Trigger: CCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC...TATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTGGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp GTCGCTAAGCGGGACCGCAGTGAAAGCAGGAGACTTTCGGTCTCCAGACTGGGTGACAGCGTGAGCACGTaGACCATAGCAGGGACAAGG +
Preference number: 2 (lower is better)
Translates to: VAKRDRSESRRLSVSRLGDSVST*TIAGTR
Trigger: CCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC...ACCCAGTCTGGAGACCGAAAGTCTCCTGCTTTCACTGCGGTCCCGCTTAGCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR-3UTR CCA 90 bp ATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGGCCACCCCATGGATGGGACCTaGAACATCTGGATCATGTCC +
Preference number: 2 (lower is better)
Translates to: IPGTKASLKHGTSTREGHPMDGT*NIWIMS
Trigger: GGACATGATCCAGATGTTCCAGGTCCCATCCATGGG...GTGGCCCTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR CAA 90 bp AAATCATACTCCCTCAGCTGGTTGAGCATGCGCTGCATCTCCTCGTaGATGCTGAGGGCTGTGCTCTCCTCCTCATCCCCATCGGGCTGG +
Preference number: 2 (lower is better)
Translates to: KSYSLSWLSMRCISS*MLRAVLSSSSPSGW
Trigger: CCAGCCCGATGGGGATGAGGAGGAGAGCACAGCCCTCAGCATCAACGAGGAGATGCAGCGCATGCTCAACCAGCTGAGGGAGTATGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR-3UTR TCA 90 bp CACAGCCACATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTGGACCATATGGAGAAGCCAAGACTaGGGGAGAAAGCCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: HSHIHSTWQVDSVSTWTIWRSQD*GRKPEG
Trigger: TCCCTCAGGCTTTCTCCCTCAGTCTTGGCTTCTCCA...TATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCTGGAGAAGCCAAGACTaGGGGAGAAAGCCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLWRSQD*GRKPEG
Trigger: TCCCTCAGGCTTTCTCCCTCAGTCTTGGCTTCTCCA...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp TCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGAGCAGACACCCACGCGTaGAGGCAGGAGAGCCCCAAC +
Preference number: 2 (lower is better)
Translates to: SGQQGWRKGPTFTFLIRGADTHA*RQESPN
Trigger: GTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGC...TCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCAGATACGTGGACAAGGTaGGGGGCCGCAATCGCTCTG +
Preference number: 2 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSDTWTR*GAAIAL
Trigger: CAGAGCGATTGCGGCCCCTCACCTTGTCCACGTATC...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGCCACATTCACATTCCTaGTACGTGGACAAGGTGAGG +
Preference number: 2 (lower is better)
Translates to: VPIPGTKASLKHGTSTREPHSHS*YVDKVR
Trigger: CCTCACCTTGTCCACGTATCAGGAATGTGAATGTGG...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGGTTGGTCTCAGTGTATaGCAGACACGGAGGAAGCAC +
Preference number: 2 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWVGLSV*QTRRKH
Trigger: GTGCTTCCTCCGTGTCTGTCATACACTGAGACCAAC...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCACGCAGAGCTTGGCGGTaGTGTCGATGCGGCGGCAGA +
Preference number: 2 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSRRAWR*CRCGGR
Trigger: TCTGCCGCCGCATCGACATCACCGCCAAGCTCTGCG...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR-3UTR TCA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTACTCCCTCAGCTGGTTaGGCATGCGCTGCATCTCCT +
Preference number: 2 (lower is better)
Translates to: TETLSAHTPAHTCMELHLTPSAG*ACAASP
Trigger: AGGAGATGCAGCGCATGCTCAACCAGCTGAGGGAGT...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR-3UTR GCA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCACAGGGACCGGCCTGGTaGAGAGCTGCAGCTGATGTT +
Preference number: 2 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSQGPAW*RAAADV
Trigger: AACATCAGCTGCAGCTCTGCACCAGGCCGGTCCCTG...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp ATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGGCCACTGCGTAGCCTCCAGCTaGATTCTATTCCACTCCAGT +
Preference number: 2 (lower is better)
Translates to: IPGTKASLKHGTSTREGHCVASS*ILFHSS
Trigger: ACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCA...GTGGCCCTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp TGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCTCTATCTCATGGAGCTGTCATGCGTAGCCTCCAGCTaGATTCTATTCCACTCCAGT +
Preference number: 2 (lower is better)
Translates to: CEGLGCKGEAGLYLMELSCVASS*ILFHSS
Trigger: ACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCA...TGACAGCTCCATGAGATAGAGACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR-3UTR GCA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCGTGCTGCAGAGGCCATaGGTAGCCTCCAGCTGCATT +
Preference number: 2 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSVLQRP*VASSCI
Trigger: AATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCAC...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTATAGCAGGGACAAGGTaGCCCGGCCAGCCCCAACGC +
Preference number: 2 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSIAGTR*PGQPQR
Trigger: GCGTTGGGGCTGGCCGGGGCACCTTGTCCCTGCTAT...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp GAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCCCCTTCAAAACACTGTaGCCATCCCGGGCACTAAGG +
Preference number: 2 (lower is better)
Translates to: ETLSAHTPAHTCMELHLLPFKTL*PSRALR
Trigger: CCTTAGTGCCCGGGATGGGCACAGTGTTTTGAAGGG...GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp ACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGCGGGCTCCCGCCTCCTaGCCGCACCAGAACAGAGCT +
Preference number: 2 (lower is better)
Translates to: TTGMEERSHIHIPDTWTRRAPAS*PHQNRA
Trigger: AGCTCTGTTCTGGTGCGGGCAGGAGGCGGGAGCCCG...CCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR-3UTR CCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTCCCCAGGGACCGGCCTaGTGCAGAGCTGCAGCTGAT +
Preference number: 2 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSPQGPA*CRAAAD
Trigger: ATCAGCTGCAGCTCTGCACCAGGCCGGTCCCTGGGG...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp GAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCCAACTGTGGTGGAAATaGCCCCAGAATGGTAGGGCC +
Preference number: 2 (lower is better)
Translates to: ETLSAHTPAHTCMELHLLQLWWK*PQNGRA
Trigger: GGCCCTACCATTCTGGGGCCATTTCCACCACAGTTG...GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp CACAGCCACATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTGGACCATAGAGCCCCAACTGTGGTaGAAATGGCCCCAGAATGGT +
Preference number: 2 (lower is better)
Translates to: HSHIHSTWQVDSVSTWTIEPQLW*KWPQNG
Trigger: ACCATTCTGGGGCCATTTCCACCACAGTTGGGGCTC...TATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp GAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCGAGCCCCAACTGTGGTaGAAATGGCCCCAGAATGGT +
Preference number: 2 (lower is better)
Translates to: ETLSAHTPAHTCMELHLLEPQLW*KWPQNG
Trigger: ACCATTCTGGGGCCATTTCCACCACAGTTGGGGCTC...GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGGGGCCGCAATCGCTCTaGCAGCATTTTAAAGATGGG +
Preference number: 2 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWGPQSL*QHFKDG
Trigger: CCCATCTTTAAAATGCTGCCAGAGCGATTGCGGCCC...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCGACAGCGTGAGCACGTaGACCATAGCAGGGACAAGG +
Preference number: 2 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSDSVST*TIAGTR
Trigger: CCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp ACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGCTGAGGGAGAAAGCCTaGGGGAGGAGCGCCCCAGTC +
Preference number: 2 (lower is better)
Translates to: TTGMEERSHIHIPDTWTRLREKA*GRSAPV
Trigger: GACTGGGGCGCTCCTCCCTCAGGCTTTCTCCCTCAG...CCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp CACAGCCACATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTGGACCATAGTTGGTCTCAGTGTATaGCAGACACGGAGGAAGCAC +
Preference number: 2 (lower is better)
Translates to: HSHIHSTWQVDSVSTWTIVGLSV*QTRRKH
Trigger: GTGCTTCCTCCGTGTCTGTCATACACTGAGACCAAC...TATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTGGCTGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp CACAGCCACATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTGGACCATACCTTCTCCCGGGTTTTaGACAGGGACTCCGTATCTT +
Preference number: 2 (lower is better)
Translates to: HSHIHSTWQVDSVSTWTIPSPGF*TGTPYL
Trigger: AAGATACGGAGTCCCTGTTCAAAACCCGGGAGAAGG...TATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR-3UTR CCA 90 bp CGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTTAGCACCAGGAGAGCCCCAACTGTaGTGGAAATGGCCCCAGAAT +
Preference number: 2 (lower is better)
Translates to: RSLQLHSIPLQCLGQLAPGEPQL*WKWPQN
Trigger: ATTCTGGGGCCATTTCCACCACAGTTGGGGCTCTCC...TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTGGAGAGCCCCAACTGTaGTGGAAATGGCCCCAGAAT +
Preference number: 2 (lower is better)
Translates to: SPAACAAEAMRSLQLHSIGEPQL*WKWPQN
Trigger: ATTCTGGGGCCATTTCCACCACAGTTGGGGCTCTCC...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCGGGCCGCAATCGCTCTaGCAGCATTTTAAAGATGGG +
Preference number: 2 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLGPQSL*QHFKDG
Trigger: CCCATCTTTAAAATGCTGCCAGAGCGATTGCGGCCC...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp CACAGCCACATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTGGACCATATCCGGACAACAGGGATaGAGGAAAGGTCCCACATTC +
Preference number: 2 (lower is better)
Translates to: HSHIHSTWQVDSVSTWTISGQQG*RKGPTF
Trigger: GAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGA...TATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGACACTGTAGCCTGTTaGTCTCAGTGTATGACAGAC +
Preference number: 2 (lower is better)
Translates to: VPIPGTKASLKHGTSTREDTVAC*SQCMTD
Trigger: GTCTGTCATACACTGAGACCAACAGGCTACAGTGTC...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCATGGAGAAGCCAAGACTaGGGGAGAAAGCCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSWRSQD*GRKPEG
Trigger: TCCCTCAGGCTTTCTCCCTCAGTCTTGGCTTCTCCA...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCAGATACGTGGACAAGGTaGGGGGCCGCAATCGCTCTG +
Preference number: 2 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSDTWTR*GAAIAL
Trigger: CAGAGCGATTGCGGCCCCTCACCTTGTCCACGTATC...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCCACATTCACATTCCTaGTACGTGGACAAGGTGAGG +
Preference number: 2 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLPHSHS*YVDKVR
Trigger: CCTCACCTTGTCCACGTATCAGGAATGTGAATGTGG...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp CTGGCAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGAAGCACATCTTTAGCTaGTACTTAAACAGAGACCCT +
Preference number: 2 (lower is better)
Translates to: LAGGQREHVDHSRDKVPRKHIFS*YLNRDP
Trigger: AGGGTCTCTGTTTAAGTATCAGCTAAAGATGTGCTT...CCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTGTTGGTCTCAGTGTATaGCAGACACGGAGGAAGCAC +
Preference number: 2 (lower is better)
Translates to: SPAACAAEAMRSLQLHSIVGLSV*QTRRKH
Trigger: GTGCTTCCTCCGTGTCTGTCATACACTGAGACCAAC...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp TCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAGGGACCGGCCTGGTaGAGAGCTGCAGCTGATGTT +
Preference number: 2 (lower is better)
Translates to: SGQQGWRKGPTFTFLIRGQGPAW*RAAADV
Trigger: AACATCAGCTGCAGCTCTGCACCAGGCCGGTCCCTG...TCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTCAGGGACCGGCCTGGTaGAGAGCTGCAGCTGATGTT +
Preference number: 2 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSQGPAW*RAAADV
Trigger: AACATCAGCTGCAGCTCTGCACCAGGCCGGTCCCTG...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp AAGGGGGAGGCAGGTCTCTATCTCATGGAGCTGTCAGATGAGACATCGCGATCGGAGCCCCAACTGTGGTaGAAATGGCCCCAGAATGGT +
Preference number: 2 (lower is better)
Translates to: KGEAGLYLMELSDETSRSEPQLW*KWPQNG
Trigger: ACCATTCTGGGGCCATTTCCACCACAGTTGGGGCTC...CGATCGCGATGTCTCATCTGACAGCTCCATGAGATAGAGACCTGCCTCCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR-3UTR CCA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCGGGCCGCAATCGCTCTaGCAGCATTTTAAAGATGGG +
Preference number: 2 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSGPQSL*QHFKDG
Trigger: CCCATCTTTAAAATGCTGCCAGAGCGATTGCGGCCC...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTTCCGGACAACAGGGATaGAGGAAAGGTCCCACATTC +
Preference number: 2 (lower is better)
Translates to: SPAACAAEAMRSLQLHSISGQQG*RKGPTF
Trigger: GAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGA...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCAGTTAGCACCAGTGTaGAAGACAGTGAGCTGGCTC +
Preference number: 2 (lower is better)
Translates to: RDPERTYTRAHMHGASPSQLAPV*KTVSWL
Trigger: GAGCCAGCTCACTGTCTTCCACACTGGTGCTAACTG...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCAGTTAGCACCAGTGTaGAAGACAGTGAGCTGGCTC +
Preference number: 2 (lower is better)
Translates to: TETLSAHTPAHTCMELHLQLAPV*KTVSWL
Trigger: GAGCCAGCTCACTGTCTTCCACACTGGTGCTAACTG...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp CGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTTAGCACCACTTTCTCCTGGATCTTaGTGTCCAGCTCCGACAGGT +
Preference number: 2 (lower is better)
Translates to: RSLQLHSIPLQCLGQLAPLSPGS*CPAPTG
Trigger: ACCTGTCGGAGCTGGACACCAAGATCCAGGAGAAAG...TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR-3UTR TCA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCCCACATTCACATTCCTaGTACGTGGACAAGGTGAGG +
Preference number: 2 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSPHSHS*YVDKVR
Trigger: CCTCACCTTGTCCACGTATCAGGAATGTGAATGTGG...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp ACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGCAGGGACCGGCCTGGTaGAGAGCTGCAGCTGATGTT +
Preference number: 2 (lower is better)
Translates to: TTGMEERSHIHIPDTWTRQGPAW*RAAADV
Trigger: AACATCAGCTGCAGCTCTGCACCAGGCCGGTCCCTG...CCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTTGCGTAGCCTCCAGCTaGATTCTATTCCACTCCAGT +
Preference number: 2 (lower is better)
Translates to: TETLSAHTPAHTCMELHLCVASS*ILFHSS
Trigger: ACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCA...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTGTGCTGCAGAGGCCATaGGTAGCCTCCAGCTGCATT +
Preference number: 2 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSVLQRP*VASSCI
Trigger: AATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCAC...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCATCATTTACACGGTCTTaGAGCTGGATCCGCACCGTG +
Preference number: 2 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSSFTRS*SWIRTV
Trigger: CACGGTGCGGATCCAGCTGCAAGACCGTGTAAATGA...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR-3UTR CCA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAAGAGCCCCAACTGTGGTaGAAATGGCCCCAGAATGGT +
Preference number: 2 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQEPQLW*KWPQNG
Trigger: ACCATTCTGGGGCCATTTCCACCACAGTTGGGGCTC...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTGACAGCGTGAGCACGTaGACCATAGCAGGGACAAGG +
Preference number: 2 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSDSVST*TIAGTR
Trigger: CCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTCACATACACTCCACCTaGCAGGTGGACAGCGTGAGC +
Preference number: 2 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSHIHST*QVDSVS
Trigger: GCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTG...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTTGGAGAAGCCAAGACTaGGGGAGAAAGCCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSWRSQD*GRKPEG
Trigger: TCCCTCAGGCTTTCTCCCTCAGTCTTGGCTTCTCCA...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCGTGCTGCAGAGGCCATaGGTAGCCTCCAGCTGCATT +
Preference number: 2 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLVLQRP*VASSCI
Trigger: AATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCAC...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTCCCTTCAAAACACTGTaGCCATCCCGGGCACTAAGG +
Preference number: 2 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSPFKTL*PSRALR
Trigger: CCTTAGTGCCCGGGATGGGCACAGTGTTTTGAAGGG...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCAACACCCGCGCACACATaGATGGAGCTTCACCTTCTC +
Preference number: 2 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSTPAHT*MELHLL
Trigger: GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGT...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTACACCCGCGCACACATaGATGGAGCTTCACCTTCTC +
Preference number: 2 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSTPAHT*MELHLL
Trigger: GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGT...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCACCGCGCACACATGCATaGAGCTTCACCTTCTCTGTC +
Preference number: 2 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSPRTHA*SFTFSV
Trigger: GACAGAGAAGGTGAAGCTCCATGCATGTGTGCGCGG...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp ATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGGCCACATTAAAGAATCCATTTaGATGTCAGCTCAACACAGC +
Preference number: 2 (lower is better)
Translates to: IPGTKASLKHGTSTREGHIKESI*MSAQHS
Trigger: GCTGTGTTGAGCTGACATTCAAATGGATTCTTTAAT...GTGGCCCTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR GCA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCTTCAAAACACTGTaGCCATCCCGGGCACTAAGG +
Preference number: 2 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLPFKTL*PSRALR
Trigger: CCTTAGTGCCCGGGATGGGCACAGTGTTTTGAAGGG...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp ACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGCAACTGTGGTGGAAATaGCCCCAGAATGGTAGGGCC +
Preference number: 2 (lower is better)
Translates to: TTGMEERSHIHIPDTWTRQLWWK*PQNGRA
Trigger: GGCCCTACCATTCTGGGGCCATTTCCACCACAGTTG...CCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTGGGCCGCAATCGCTCTaGCAGCATTTTAAAGATGGG +
Preference number: 2 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSGPQSL*QHFKDG
Trigger: CCCATCTTTAAAATGCTGCCAGAGCGATTGCGGCCC...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTTCCGGACAACAGGGATaGAGGAAAGGTCCCACATTC +
Preference number: 2 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSSGQQG*RKGPTF
Trigger: GAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGA...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCGTTGGTCTCAGTGTATaGCAGACACGGAGGAAGCAC +
Preference number: 2 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLVGLSV*QTRRKH
Trigger: GTGCTTCCTCCGTGTCTGTCATACACTGAGACCAAC...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR CAA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTaGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTTTAGCT +
Preference number: 2 (lower is better)
Translates to: PASPGFSKNQGHCSL*VSVYDRHGGSTSLA
Trigger: AGCTAAAGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCACATTCACATTCCTaGTACGTGGACAAGGTGAGG +
Preference number: 2 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLPHSHS*YVDKVR
Trigger: CCTCACCTTGTCCACGTATCAGGAATGTGAATGTGG...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTATTAAAGAATCCATTTaGATGTCAGCTCAACACAGC +
Preference number: 2 (lower is better)
Translates to: SPAACAAEAMRSLQLHSIIKESI*MSAQHS
Trigger: GCTGTGTTGAGCTGACATTCAAATGGATTCTTTAAT...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR TCA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCAAGCACATCTTTAGCTaGTACTTAAACAGAGACCCT +
Preference number: 2 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLKHIFS*YLNRDP
Trigger: AGGGTCTCTGTTTAAGTATCAGCTAAAGATGTGCTT...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR GCA 72 bp CCACCTTCAGTCGCACAGATCCGGGCTCCCGCCTCCTaGCCGCACCAGAACAGAGCTCGTCGAGCCCGCTGC +
Preference number: 3 (lower is better)
Translates to: PPSVAQIRAPAS*PHQNRARRARC
Trigger: GCAGCGGGCTCGACGAGCTCTGTTCTGGTGCGGGCAGGAGGCGGGAGCCCGGATCTGTGCGACTGAAGGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR CCA 72 bp ATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTaGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCC +
Preference number: 3 (lower is better)
Translates to: IHSTWQVDSVST*TIAGTRCPGQP
Trigger: GGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CAA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGCCACATCGCAGAGCTaGGCGGTGATGTCGATGCGG +
Preference number: 3 (lower is better)
Translates to: VPIPGTKASLKHGTSTREATSQS*AVMSMR
Trigger: CCGCATCGACATCACCGCCAAGCTCTGCGATGTGGC...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR-3UTR CAA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGCGGTTCATGTCGTTCTaGGCCGTGGCCAACTCCAGC +
Preference number: 3 (lower is better)
Translates to: VPIPGTKASLKHGTSTRERFMSF*AVANSS
Trigger: GCTGGAGTTGGCCACGGCCAAGAACGACATGAACCG...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR TCA 72 bp AGCTGGGACCTAGGTCCAGACCCCTGGCTCTGCCACTaGACGGCTCAGTTGCTTTGGGCAGTTACTCCCGGG +
Preference number: 3 (lower is better)
Translates to: SWDLGPDPWLCH*TAQLLWAVTPG
Trigger: CCCGGGAGTAACTGCCCAAAGCAACTGAGCCGTTCAGTGGCAGAGCCAGGGGTCTGGACCTAGGTCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465801.5
3UTR CCA 72 bp CGCGTGAAGGCAGGAGAGCCCCAACTGTGGTGGAAATaGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGA +
Preference number: 3 (lower is better)
Translates to: RVKAGEPQLWWK*PQNGRAKPSSR
Trigger: TCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCATTTCCACCACAGTTGGGGCTCTCCTGCCTTCACGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR CCA 72 bp AGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTaGTGGAAATGGCCCCAGAATGGTAGGGCCAAGCCT +
Preference number: 3 (lower is better)
Translates to: RHPRVKAGEPQL*WKWPQNGRAKP
Trigger: AGGCTTGGCCCTACCATTCTGGGGCCATTTCCACCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR CCA 72 bp GCCTCGGGTGCAAGGGGGAGGCAGGTCTCTATCTCATaGAGCTGTCAGATGAGACATCGCGATCGGAGTCCT +
Preference number: 3 (lower is better)
Translates to: ASGARGRQVSIS*SCQMRHRDRSP
Trigger: AGGACTCCGATCGCGATGTCTCATCTGACAGCTCCATGAGATAGAGACCTGCCTCCCCCTTGCACCCGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR-3UTR CAA 90 bp AAGGGGGAGGCAGGTCTCTATCTCATGGAGCTGTCAGATGAGACATCGCGATCGCGCTGCATCTCCTCGTaGATGCTGAGGGCTGTGCTC +
Preference number: 3 (lower is better)
Translates to: KGEAGLYLMELSDETSRSRCISS*MLRAVL
Trigger: GAGCACAGCCCTCAGCATCAACGAGGAGATGCAGCG...CGATCGCGATGTCTCATCTGACAGCTCCATGAGATAGAGACCTGCCTCCCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR CCA 72 bp ATTCCACTCCAGTGCCTGGGCCAGTTAGCACCAGTGTaGAAGACAGTGAGCTGGCTCCGGACAACAGGGATG +
Preference number: 3 (lower is better)
Translates to: IPLQCLGQLAPV*KTVSWLRTTGM
Trigger: CATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTCCACACTGGTGCTAACTGGCCCAGGCACTGGAGTGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR-3UTR CAA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCCTCATTTACACGGTCTaGCAGCTGGATCCGCACCGT +
Preference number: 3 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSLIYTV*QLDPHR
Trigger: ACGGTGCGGATCCAGCTGCAAGACCGTGTAAATGAG...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR TCA 72 bp TGGAACATCTGGATCATGTCCTCGCAGTTGCGCTGCTaGGCCACATCGCAGAGCTTGGCGGTGATGTCGATG +
Preference number: 3 (lower is better)
Translates to: WNIWIMSSQLRC*ATSQSLAVMSM
Trigger: CATCGACATCACCGCCAAGCTCTGCGATGTGGCTCAGCAGCGCAACTGCGAGGACATGATCCAGATGTTCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR-3UTR CAA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCGGACACTGTAGCCTGTaGGTCTCAGTGTATGACAGA +
Preference number: 3 (lower is better)
Translates to: HSLLYRGIVNRISPASPGGHCSL*VSVYDR
Trigger: TCTGTCATACACTGAGACCAACAGGCTACAGTGTCC...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR TCA 72 bp AACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTaGTACGTGGACAAGGTGAGGGGCCGCAATCGCTCT +
Preference number: 3 (lower is better)
Translates to: NRDGGKVPHSHS*YVDKVRGRNRS
Trigger: AGAGCGATTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR TCA 72 bp TGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTaGACCGCATCTCCCCAGCTTCTCCAGGCTTTTCCA +
Preference number: 3 (lower is better)
Translates to: CQLNTASYTEAL*TASPQLLQAFP
Trigger: TGGAAAAGCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR TCA 72 bp GTGGCCAACTCCAGCTCTATCTGGTCAATGGTCTCCTaGTACTCCTTCTCCCGGGTTTTGAACAGGGACTCC +
Preference number: 3 (lower is better)
Translates to: VANSSSIWSMVS*YSFSRVLNRDS
Trigger: GGAGTCCCTGTTCAAAACCCGGGAGAAGGAGTATCAGGAGACCATTGACCAGATAGAGCTGGAGTTGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487279.6
3UTR-3UTR CAA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCAGGACACTGTAGCCTGTaGGTCTCAGTGTATGACAGA +
Preference number: 3 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSGHCSL*VSVYDR
Trigger: TCTGTCATACACTGAGACCAACAGGCTACAGTGTCC...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR CCA 72 bp CAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTaGTCTCAGTGTATGACAGACACGGAGGAAGCACAT +
Preference number: 3 (lower is better)
Translates to: QAFPRIRDTVAC*SQCMTDTEEAH
Trigger: ATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGGTGGTCGCCTCCCAGTaGGTCCCCCAGTGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SPTLCLAELPAARASGARVVASQ*VPQWPG
Trigger: GCCGGGCCACTGGGGGACTCACTGGGAGGCGACCAC...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGCCTCGACGGCAGCCTTaGGCTCCCGCTTCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: SPTLCLAELPAARASGARPRRQP*APASAP
Trigger: GGGGGCGGAAGCGGGAGCGCAAGGCTGCCGTCGAGG...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGAGGCCCCGCCGGCCCTaGTTACCCTCCTCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: SPTLCLAELPAARASGARRPRRP*LPSSSA
Trigger: AGCGCTGGAGGAGGGTAAGCAGGGCCGGCGGGGCCT...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCCCGGTCTGCACTGCCTaGTCGCGACGACCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: CLAELPAARASGARGRQVPVCTA*SRRPRP
Trigger: GGGCCTGGGTCGTCGCGACCAGGCAGTGCAGACCGG...GACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp TGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCCCCACCCCATCCGGGTaGACCCACGACAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: CLAELPAARASGARGRQVPTPSG*THDKPG
Trigger: GCCTGGCTTGTCGTGGGTGCACCCGGATGGGGTGGG...GACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCTCGACGGCAGCCTTaGGCTCCCGCTTCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: GGQREHVDHSRDKVPRPAPRRQP*APASAP
Trigger: GGGGGCGGAAGCGGGAGCGCAAGGCTGCCGTCGAGG...GGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp TGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCTGCGAGGGCCTCGGGTaGAAGGGGGAGGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: CLAELPAARASGARGRQVCEGLG*KGEAGL
Trigger: GAGACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCA...GACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCGGGGCCGGATGGGGCTaGCGAAGCCGGTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: GGQREHVDHSRDKVPRPAGAGWG*RSRSAL
Trigger: CAGTGCAGACCGGCTTCGTCAGCCCCATCCGGCCCC...GGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGCTGAGGGAGAAAGCCTaGGGGAGGAGCGCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: SPTLCLAELPAARASGARLREKA*GRSAPV
Trigger: GACTGGGGCGCTCCTCCCTCAGGCTTTCTCCCTCAG...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCACCGGTCTGCACTGCCTaGTCGCGACGACCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPPVCTA*SRRPRP
Trigger: GGGCCTGGGTCGTCGCGACCAGGCAGTGCAGACCGG...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp TGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGGTGGTCGCCTCCCAGTaGGTCCCCCAGTGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: WPQNGRAKPSSRHPRALEVVASQ*VPQWPG
Trigger: GCCGGGCCACTGGGGGACTCACTGGGAGGCGACCAC...CTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGCGGCGCTCCAGCTCATaGACCTTGGCCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SPTLCLAELPAARASGARRRSSS*TLARKQ
Trigger: CTGCTTCCTGGCCAAGGTGCATGAGCTGGAGCGCCG...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAAAGGCCCCGCCGGCCCTaGTTACCCTCCTCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: DSVSTWTIAGTRCPGQPQRPRRP*LPSSSA
Trigger: AGCGCTGGAGGAGGGTAAGCAGGGCCGGCGGGGCCT...TTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp TGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGCCTCGACGGCAGCCTTaGGCTCCCGCTTCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: WPQNGRAKPSSRHPRALEPRRQP*APASAP
Trigger: GGGGGCGGAAGCGGGAGCGCAAGGCTGCCGTCGAGG...CTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp TGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCCTCTCCCTGGGCCTCTaGAGCTGCCATGGCATAGCC +
Preference number: 4 (lower is better)
Translates to: CLAELPAARASGARGRQVLSLGL*SCHGIA
Trigger: GGCTATGCCATGGCAGCTGCAGAGGCCCAGGGAGAG...GACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGCTCTCCCTGGGCCTCTaGAGCTGCCATGGCATAGCC +
Preference number: 4 (lower is better)
Translates to: SPTLCLAELPAARASGARLSLGL*SCHGIA
Trigger: GGCTATGCCATGGCAGCTGCAGAGGCCCAGGGAGAG...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CTGGCAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCGGTCTGCACTGCCTaGTCGCGACGACCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LAGGQREHVDHSRDKVPRPVCTA*SRRPRP
Trigger: GGGCCTGGGTCGTCGCGACCAGGCAGTGCAGACCGG...CCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCGCCCTTGCACCAGAGTaGGCTCCAGTCCCGGCCCGA +
Preference number: 4 (lower is better)
Translates to: GGQREHVDHSRDKVPRPAALAPE*APVPAR
Trigger: TCGGGCCGGGACTGGAGCCCACTCTGGTGCAAGGGC...GGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGAGGGGCCGGATGGGGCTaGCGAAGCCGGTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: GPRMVGPSLAPDTPEPWRGAGWG*RSRSAL
Trigger: CAGTGCAGACCGGCTTCGTCAGCCCCATCCGGCCCC...TCTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CGGGCTCCCGCCTCCTGCCCGCACCAGAACAGAGCTCGTCGAGCCCGCTGCCCTACTCCCTCAGCTGGTTaGGCATGCGCTGCATCTCCT +
Preference number: 4 (lower is better)
Translates to: RAPASCPHQNRARRARCPTPSAG*ACAASP
Trigger: AGGAGATGCAGCGCATGCTCAACCAGCTGAGGGAGT...AGGGCAGCGGGCTCGACGAGCTCTGTTCTGGTGCGGGCAGGAGGCGGGAGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR TCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAGCAGACACCCACGCGTaGAGGCAGGAGAGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPADTHA*RQESPN
Trigger: GTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGC...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CACAGATCCGGGCTCCCGCCTCCTGCCCGCACCAGAACAGAGCTCGTCGAGCCCCGGCGCTCCAGCTCATaGACCTTGGCCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: HRSGLPPPARTRTELVEPRRSSS*TLARKQ
Trigger: CTGCTTCCTGGCCAAGGTGCATGAGCTGGAGCGCCG...GGGCTCGACGAGCTCTGTTCTGGTGCGGGCAGGAGGCGGGAGCCCGGATCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR GCA 90 bp CACTCTCCGACAGGGAGGTGTCCTCCTCGACGGCAGCCTTGCGCTCCCGCTTCCGAAGCCGGTCTGCACTaGCTGGTCGCGACGACCCAG +
Preference number: 4 (lower is better)
Translates to: HSPTGRCPPRRQPCAPASEAGLH*LVATTQ
Trigger: CTGGGTCGTCGCGACCAGGCAGTGCAGACCGGCTTC...GGAAGCGGGAGCGCAAGGCTGCCGTCGAGGAGGACACCTCCCTGTCGGAGAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR GCA 90 bp ACAGATCCGGGCTCCCGCCTCCTGCCCGCACCAGAACAGAGCTCGTCGAGCCCGCTGACGAAGCCGGTCTaGACTGCCTGGTCGCGACGA +
Preference number: 4 (lower is better)
Translates to: TDPGSRLLPAPEQSSSSPLTKPV*TAWSRR
Trigger: TCGTCGCGACCAGGCAGTGCAGACCGGCTTCGTCAG...CGGGCTCGACGAGCTCTGTTCTGGTGCGGGCAGGAGGCGGGAGCCCGGATCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR GCA 90 bp CTGGCAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCCACCCCATCCGGGTaGACCCACGACAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LAGGQREHVDHSRDKVPRPTPSG*THDKPG
Trigger: GCCTGGCTTGTCGTGGGTGCACCCGGATGGGGTGGG...CCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GGAAATGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCCCTCGACGGCAGCCTTaGGCTCCCGCTTCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: GNGPRMVGPSLAPDTPEPPRRQP*APASAP
Trigger: GGGGGCGGAAGCGGGAGCGCAAGGCTGCCGTCGAGG...GGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCATTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGCAGGGACCGGCCTGGTaGAGAGCTGCAGCTGATGTT +
Preference number: 4 (lower is better)
Translates to: SPTLCLAELPAARASGARQGPAW*RAAADV
Trigger: AACATCAGCTGCAGCTCTGCACCAGGCCGGTCCCTG...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CGGGCTCCCGCCTCCTGCCCGCACCAGAACAGAGCTCGTCGAGCCCGCTGCCCTGTGCTGCAGAGGCCATaGGTAGCCTCCAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: RAPASCPHQNRARRARCPVLQRP*VASSCI
Trigger: AATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCAC...AGGGCAGCGGGCTCGACGAGCTCTGTTCTGGTGCGGGCAGGAGGCGGGAGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR GCA 90 bp GGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCATAGCAGGGACAAGGTaGCCCGGCCAGCCCCAACGC +
Preference number: 4 (lower is better)
Translates to: GGQREHVDHSRDKVPRPAIAGTR*PGQPQR
Trigger: GCGTTGGGGCTGGCCGGGGCACCTTGTCCCTGCTAT...GGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CCACCTTCAGTCGCACAGATCCGGGCTCCCGCCTCCTGCCCGCACCAGAACAGACGCAGAGCTTGGCGGTaGTGTCGATGCGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: PPSVAQIRAPASCPHQNRRRAWR*CRCGGR
Trigger: TCTGCCGCCGCATCGACATCACCGCCAAGCTCTGCG...TCTGTTCTGGTGCGGGCAGGAGGCGGGAGCCCGGATCTGTGCGACTGAAGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR TCA 90 bp GGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCAACGCCCTCTGCCGCTaGCAGGGACAGAAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GGQREHVDHSRDKVPRPANALCR*QGQKPS
Trigger: AGAGGGCTTCTGTCCCTGTCAGCGGCAGAGGGCGTT...GGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGCTTAAACAGAGACCCTaGGCGCACATACACCCGCGC +
Preference number: 4 (lower is better)
Translates to: SPTLCLAELPAARASGARLKQRP*AHIHPR
Trigger: GCGCGGGTGTATGTGCGCTCAGGGTCTCTGTTTAAG...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAATGGAGCCCAGGTCATTaGGGAGGGCCATGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: DSVSTWTIAGTRCPGQPQWSPGH*GGPWRQ
Trigger: CTGCCGCCATGGCCCTCCGCAATGACCTGGGCTCCA...TTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CTGGCAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGGAAGCCGGTCTGCACTaGCTGGTCGCGACGACCCAG +
Preference number: 4 (lower is better)
Translates to: LAGGQREHVDHSRDKVPREAGLH*LVATTQ
Trigger: CTGGGTCGTCGCGACCAGGCAGTGCAGACCGGCTTC...CCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCCTCGACGGCAGCCTTaGGCTCCCGCTTCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: AEAMRSLQLHSIPLQCLGPRRQP*APASAP
Trigger: GGGGGCGGAAGCGGGAGCGCAAGGCTGCCGTCGAGG...GCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp ACAGATCCGGGCTCCCGCCTCCTGCCCGCACCAGAACAGAGCTCGTCGAGCCCGGAAGCCCTCTCCAGCTaGGTGTGCTGCAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: TDPGSRLLPAPEQSSSSPEALSS*VCCRGH
Trigger: ATGGCCTCTGCAGCACACGCAGCTGGAGAGGGCTTC...CGGGCTCGACGAGCTCTGTTCTGGTGCGGGCAGGAGGCGGGAGCCCGGATCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR CCA 90 bp GGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGACCTCCCCCGGCGAAGTaGTCGCCTCCCAGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: GPRMVGPSLAPDTPEPWRPPPAK*SPPSES
Trigger: GGACTCACTGGGAGGCGACCACTTCGCCGGGGGAGG...TCTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAACCCCAGGGACCGGCCTaGTGCAGAGCTGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: DSVSTWTIAGTRCPGQPQPQGPA*CRAAAD
Trigger: ATCAGCTGCAGCTCTGCACCAGGCCGGTCCCTGGGG...TTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CCCCATGGATGGGACCTGGAACATCTGGATCATGTCCTCGCAGTTGCGCTGCTGGTGGTCGCCTCCCAGTaGGTCCCCCAGTGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: PHGWDLEHLDHVLAVALLVVASQ*VPQWPG
Trigger: GCCGGGCCACTGGGGGACTCACTGGGAGGCGACCAC...CAGCAGCGCAACTGCGAGGACATGATCCAGATGTTCCAGGTCCCATCCATGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR TCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGGGGGCCGGATGGGGCTaGCGAAGCCGGTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWGAGWG*RSRSAL
Trigger: CAGTGCAGACCGGCTTCGTCAGCCCCATCCGGCCCC...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGAGATGGTGCCGGGCATaGAGCGGGCCGACGAGGAAT +
Preference number: 4 (lower is better)
Translates to: QVDSVSTWTIAGTRCPGQRWCRA*SGPTRN
Trigger: ATTCCTCGTCGGCCCGCTTCATGCCCGGCACCATCT...CTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAAAGATGGTGCCGGGCATaGAGCGGGCCGACGAGGAAT +
Preference number: 4 (lower is better)
Translates to: DSVSTWTIAGTRCPGQPQRWCRA*SGPTRN
Trigger: ATTCCTCGTCGGCCCGCTTCATGCCCGGCACCATCT...TTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGTGGAGAAGCCAAGACTaGGGGAGAAAGCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SPTLCLAELPAARASGARWRSQD*GRKPEG
Trigger: TCCCTCAGGCTTTCTCCCTCAGTCTTGGCTTCTCCA...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGAACGCCCTCTGCCGCTaGCAGGGACAGAAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: QVDSVSTWTIAGTRCPGQNALCR*QGQKPS
Trigger: AGAGGGCTTCTGTCCCTGTCAGCGGCAGAGGGCGTT...CTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCGGCGCTCCAGCTCATaGACCTTGGCCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: QVDSVSTWTIAGTRCPGQRRSSS*TLARKQ
Trigger: CTGCTTCCTGGCCAAGGTGCATGAGCTGGAGCGCCG...CTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp TGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCAGCGCTTGCTGCAGTTaGTTCTCCAACAGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: CLAELPAARASGARGRQVSACCS*FSNSRF
Trigger: GAACCGGCTGTTGGAGAAGCAACTGCAGCAAGCGCT...GACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGTGCGAGGGCCTCGGGTaGAAGGGGGAGGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: VPIPGTKASLKHGTSTRECEGLG*KGEAGL
Trigger: GAGACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCA...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGAATAGCAGGGACAAGGTaGCCCGGCCAGCCCCAACGC +
Preference number: 4 (lower is better)
Translates to: GPRMVGPSLAPDTPEPWRIAGTR*PGQPQR
Trigger: GCGTTGGGGCTGGCCGGGGCACCTTGTCCCTGCTAT...TCTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGCGGGCTCCCGCCTCCTaGCCGCACCAGAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: VPIPGTKASLKHGTSTRERAPAS*PHQNRA
Trigger: AGCTCTGTTCTGGTGCGGGCAGGAGGCGGGAGCCCG...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465801.5
ENST00000487279.6
CDS-3UTR CCA 90 bp GGAAATGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCGCCCTTGCACCAGAGTaGGCTCCAGTCCCGGCCCGA +
Preference number: 4 (lower is better)
Translates to: GNGPRMVGPSLAPDTPEPALAPE*APVPAR
Trigger: TCGGGCCGGGACTGGAGCCCACTCTGGTGCAAGGGC...GGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCATTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCAGGCATCAGCCTCCTaGGCTTCCTCCTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GGQREHVDHSRDKVPRPAQASAS*ASSWSS
Trigger: TGAGCTCCAGGAGGAAGCCCAGGAGGCTGATGCCTG...GGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CACTCTCCGACAGGGAGGTGTCCTCCTCGACGGCAGCCTTGCGCTCCCGCTTCCCAGGCATCAGCCTCCTaGGCTTCCTCCTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: HSPTGRCPPRRQPCAPASQASAS*ASSWSS
Trigger: TGAGCTCCAGGAGGAAGCCCAGGAGGCTGATGCCTG...GGAAGCGGGAGCGCAAGGCTGCCGTCGAGGAGGACACCTCCCTGTCGGAGAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR CCA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGGGTTCATGTCGTTCTTaGCCGTGGCCAACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SPTLCLAELPAARASGARGSCRS*PWPTPA
Trigger: AGCTGGAGTTGGCCACGGCCAAGAACGACATGAACC...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCGTCCTCAGCCTCGCTTaGCGGCGGCGGCGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLVLSLA*RRRRVA
Trigger: AGCGACCCGCCGCCGCCGCCAAGCGAGGCTGAGGAC...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCGTCCTCAGCCTCGCTTaGCGGCGGCGGCGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: HSLLYRGIVNRISPASPGVLSLA*RRRRVA
Trigger: AGCGACCCGCCGCCGCCGCCAAGCGAGGCTGAGGAC...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGCAACTGTGGTGGAAATaGCCCCAGAATGGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: SPTLCLAELPAARASGARQLWWK*PQNGRA
Trigger: GGCCCTACCATTCTGGGGCCATTTCCACCACAGTTG...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGTGGAAGACAGTGAGCTaGCTCCGGACAACAGGGATG +
Preference number: 4 (lower is better)
Translates to: SPTLCLAELPAARASGARWKTVS*LRTTGM
Trigger: CATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTCCA...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CGGGCTCCCGCCTCCTGCCCGCACCAGAACAGAGCTCGTCGAGCCCGCTGCCCTCCCATGGATGGGACCTaGAACATCTGGATCATGTCC +
Preference number: 4 (lower is better)
Translates to: RAPASCPHQNRARRARCPPMDGT*NIWIMS
Trigger: GGACATGATCCAGATGTTCCAGGTCCCATCCATGGG...AGGGCAGCGGGCTCGACGAGCTCTGTTCTGGTGCGGGCAGGAGGCGGGAGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR TCA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTGTGGTCGCCTCCCAGTaGGTCCCCCAGTGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: TETLSAHTPAHTCMELHLVVASQ*VPQWPG
Trigger: GCCGGGCCACTGGGGGACTCACTGGGAGGCGACCAC...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CTGGCAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGTCGCAGTTGCGCTGCTaGGCCACATCGCAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: LAGGQREHVDHSRDKVPRSQLRC*ATSQSL
Trigger: CAAGCTCTGCGATGTGGCTCAGCAGCGCAACTGCGA...CCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp TGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCTGCCATGGCATAGCCTaGGAAATCCTCCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: CLAELPAARASGARGRQVCHGIA*EILPKQ
Trigger: CTGCTTTGGGAGGATTTCTCAGGCTATGCCATGGCA...GACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGTGGTCAATGGTCTCCTaGTACTCCTTCTCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: SPTLCLAELPAARASGARWSMVS*YSFSRV
Trigger: AACCCGGGAGAAGGAGTATCAGGAGACCATTGACCA...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAAGTGCAGAGCTGCAGCTaGTGTTCCCCTCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: DSVSTWTIAGTRCPGQPQVQSCS*CSPLCS
Trigger: GCTGCACAGAGGGGAACATCAGCTGCAGCTCTGCAC...TTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGAAACGCCCTCTGCCGCTaGCAGGGACAGAAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GPRMVGPSLAPDTPEPWRNALCR*QGQKPS
Trigger: AGAGGGCTTCTGTCCCTGTCAGCGGCAGAGGGCGTT...TCTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp TGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCTCTGTCATTCTGCAGTaGCCAGGAGAGCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: CLAELPAARASGARGRQVSVILQ*PGEQEL
Trigger: GAGCTCTTGCTCTCCTGGTCACTGCAGAATGACAGA...GACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGTATACCGAGGCATTGTaGACCGCATCTCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SPTLCLAELPAARASGARYTEAL*TASPQL
Trigger: AAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATA...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp TGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCTATACCGAGGCATTGTaGACCGCATCTCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: CLAELPAARASGARGRQVYTEAL*TASPQL
Trigger: AAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATA...GACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTGGCCCGGCCAGGCCCTaGTGCTCCTGCTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RDPERTYTRAHMHGASPSGPARP*CSCCRR
Trigger: CCTCCTGCAGCAGGAGCAGCAGGGCCTGGCCGGGCC...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCAGGCCCCGCCGGCCCTaGTTACCCTCCTCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: HSLLYRGIVNRISPASPGRPRRP*LPSSSA
Trigger: AGCGCTGGAGGAGGGTAAGCAGGGCCGGCGGGGCCT...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCAGGCCCCGCCGGCCCTaGTTACCCTCCTCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLRPRRP*LPSSSA
Trigger: AGCGCTGGAGGAGGGTAAGCAGGGCCGGCGGGGCCT...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGTCATTTACACGGTCTTaGAGCTGGATCCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: SPTLCLAELPAARASGARSFTRS*SWIRTV
Trigger: CACGGTGCGGATCCAGCTGCAAGACCGTGTAAATGA...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCCCTCGACGGCAGCCTTaGGCTCCCGCTTCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSPRRQP*APASAP
Trigger: GGGGGCGGAAGCGGGAGCGCAAGGCTGCCGTCGAGG...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCTCCAGGCTATCTTCCTaGTCTCCCTGGGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GGQREHVDHSRDKVPRPASRLSS*SPWASA
Trigger: TGCAGAGGCCCAGGGAGAGCAGGAAGATAGCCTGGA...GGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336604.8
ENST00000396840.6
ENST00000465801.5
CDS-3UTR GCA 90 bp CAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCAGGGACCGGCCTGGTaGAGAGCTGCAGCTGATGTT +
Preference number: 4 (lower is better)
Translates to: QVDSVSTWTIAGTRCPGQQGPAW*RAAADV
Trigger: AACATCAGCTGCAGCTCTGCACCAGGCCGGTCCCTG...CTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GGAAATGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCATAGCAGGGACAAGGTaGCCCGGCCAGCCCCAACGC +
Preference number: 4 (lower is better)
Translates to: GNGPRMVGPSLAPDTPEPIAGTR*PGQPQR
Trigger: GCGTTGGGGCTGGCCGGGGCACCTTGTCCCTGCTAT...GGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCATTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CACTCTCCGACAGGGAGGTGTCCTCCTCGACGGCAGCCTTGCGCTCCCGCTTCCTCCAGGCTATCTTCCTaGTGCTCTCCCTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: HSPTGRCPPRRQPCAPASSRLSS*CSPWAS
Trigger: AGAGGCCCAGGGAGAGCAGCAGGAAGATAGCCTGGA...GGAAGCGGGAGCGCAAGGCTGCCGTCGAGGAGGACACCTCCCTGTCGGAGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR CCA 90 bp CACAGCCACATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTGGACCATACCGGTCTGCACTGCCTaGTCGCGACGACCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: HSHIHSTWQVDSVSTWTIPVCTA*SRRPRP
Trigger: GGGCCTGGGTCGTCGCGACCAGGCAGTGCAGACCGG...TATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTGGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCCTTTCTCCTGGATCTTaGTGTCCAGCTCCGACAGGT +
Preference number: 4 (lower is better)
Translates to: CLAELPAARASGARGRQVLSPGS*CPAPTG
Trigger: ACCTGTCGGAGCTGGACACCAAGATCCAGGAGAAAG...GACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGTTTCGGTCTCCAGACTaGGTGATGAGCCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: QVDSVSTWTIAGTRCPGQFRSPD*VMSRRQ
Trigger: CTGCCGCCGGCTCATCACCCAGTCTGGAGACCGAAA...CTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTGTCCTCAGCCTCGCTTaGCGGCGGCGGCGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: SPAACAAEAMRSLQLHSIVLSLA*RRRRVA
Trigger: AGCGACCCGCCGCCGCCGCCAAGCGAGGCTGAGGAC...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCGGGCCGCAATCGCTCTaGCAGCATTTTAAAGATGGG +
Preference number: 4 (lower is better)
Translates to: CLAELPAARASGARGRQVGPQSL*QHFKDG
Trigger: CCCATCTTTAAAATGCTGCCAGAGCGATTGCGGCCC...GACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCTCCGGACAACAGGGATaGAGGAAAGGTCCCACATTC +
Preference number: 4 (lower is better)
Translates to: CLAELPAARASGARGRQVSGQQG*RKGPTF
Trigger: GAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGA...GACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCCAGTTAGCACCAGTGTaGAAGACAGTGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CLAELPAARASGARGRQVQLAPV*KTVSWL
Trigger: GAGCCAGCTCACTGTCTTCCACACTGGTGCTAACTG...GACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCGACAGCGTGAGCACGTaGACCATAGCAGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: GGQREHVDHSRDKVPRPADSVST*TIAGTR
Trigger: CCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC...GGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGCCCATGGATGGGACCTaGAACATCTGGATCATGTCC +
Preference number: 4 (lower is better)
Translates to: SPTLCLAELPAARASGARPMDGT*NIWIMS
Trigger: GGACATGATCCAGATGTTCCAGGTCCCATCCATGGG...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396840.6
ENST00000487279.6
CDS-3UTR TCA 90 bp CGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTTAGCACCAGGGGCCGGATGGGGCTaGCGAAGCCGGTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: RSLQLHSIPLQCLGQLAPGAGWG*RSRSAL
Trigger: CAGTGCAGACCGGCTTCGTCAGCCCCATCCGGCCCC...TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCACATGGAGCTGTCAGATaGGACATCGCGATCGGAGTC +
Preference number: 4 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPHGAVR*DIAIGV
Trigger: GACTCCGATCGCGATGTCTCATCTGACAGCTCCATG...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGCTGAGGGAGAAAGCCTaGGGGAGGAGCGCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWLREKA*GRSAPV
Trigger: GACTGGGGCGCTCCTCCCTCAGGCTTTCTCCCTCAG...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCGCAGACACCCACGCGTaGAGGCAGGAGAGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: AEAMRSLQLHSIPLQCLGADTHA*RQESPN
Trigger: GTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGC...GCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGCCACATTCACATTCCTaGTACGTGGACAAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SPTLCLAELPAARASGARPHSHS*YVDKVR
Trigger: CCTCACCTTGTCCACGTATCAGGAATGTGAATGTGG...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CCACCTTCAGTCGCACAGATCCGGGCTCCCGCCTCCTGCCCGCACCAGAACAGACTTAAACAGAGACCCTaGGCGCACATACACCCGCGC +
Preference number: 4 (lower is better)
Translates to: PPSVAQIRAPASCPHQNRLKQRP*AHIHPR
Trigger: GCGCGGGTGTATGTGCGCTCAGGGTCTCTGTTTAAG...TCTGTTCTGGTGCGGGCAGGAGGCGGGAGCCCGGATCTGTGCGACTGAAGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR TCA 90 bp TGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCGGTGAGTACGGCAAATaGGAACTAGACACAGCCTGT +
Preference number: 4 (lower is better)
Translates to: CLAELPAARASGARGRQVGEYGK*ELDTAC
Trigger: ACAGGCTGTGTCTAGTTCTCATTTGCCGTACTCACC...GACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465801.5
CDS-3UTR GCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCATCCTCCAGCGCTTGCTaGAGTTGCTTCTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPSSSAC*SCFSNS
Trigger: GCTGTTGGAGAAGCAACTGCAGCAAGCGCTGGAGGA...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGGAAGCCGGTCTGCACTaGCTGGTCGCGACGACCCAG +
Preference number: 4 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWEAGLH*LVATTQ
Trigger: CTGGGTCGTCGCGACCAGGCAGTGCAGACCGGCTTC...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCCCGAGCCGGCGGGCGTaGGAGAACGACCAGATGGTG +
Preference number: 4 (lower is better)
Translates to: ETLSAHTPAHTCMELHLLPSRRA*ENDQMV
Trigger: CACCATCTGGTCGTTCTCGCACGCCCGCCGGCTCGG...GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CACAGCCACATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTGGACCATACCGAGCCGGCGGGCGTaGGAGAACGACCAGATGGTG +
Preference number: 4 (lower is better)
Translates to: HSHIHSTWQVDSVSTWTIPSRRA*ENDQMV
Trigger: CACCATCTGGTCGTTCTCGCACGCCCGCCGGCTCGG...TATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTGGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCCCACCCCATCCGGGTaGACCCACGACAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLPTPSG*THDKPG
Trigger: GCCTGGCTTGTCGTGGGTGCACCCGGATGGGGTGGG...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCTGCGAGGGCCTCGGGTaGAAGGGGGAGGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLCEGLG*KGEAGL
Trigger: GAGACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCA...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CACAGCCACATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTGGACCATATGCGAGGGCCTCGGGTaGAAGGGGGAGGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: HSHIHSTWQVDSVSTWTICEGLG*KGEAGL
Trigger: GAGACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCA...TATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTGGCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCCTCCCCCGGCGAAGTaGTCGCCTCCCAGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLPPPAK*SPPSES
Trigger: GGACTCACTGGGAGGCGACCACTTCGCCGGGGGAGG...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCCGGTCTGCACTGCCTaGTCGCGACGACCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RDPERTYTRAHMHGASPSPVCTA*SRRPRP
Trigger: GGGCCTGGGTCGTCGCGACCAGGCAGTGCAGACCGG...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAGGTTCATGTCGTTCTTaGCCGTGGCCAACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPGSCRS*PWPTPA
Trigger: AGCTGGAGTTGGCCACGGCCAAGAACGACATGAACC...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCAGTCCTCAGCCTCGCTTaGCGGCGGCGGCGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSVLSLA*RRRRVA
Trigger: AGCGACCCGCCGCCGCCGCCAAGCGAGGCTGAGGAC...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGCCCCAGGGACCGGCCTaGTGCAGAGCTGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWPQGPA*CRAAAD
Trigger: ATCAGCTGCAGCTCTGCACCAGGCCGGTCCCTGGGG...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CACTCTCCGACAGGGAGGTGTCCTCCTCGACGGCAGCCTTGCGCTCCCGCTTCCCAACTGTGGTGGAAATaGCCCCAGAATGGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: HSPTGRCPPRRQPCAPASQLWWK*PQNGRA
Trigger: GGCCCTACCATTCTGGGGCCATTTCCACCACAGTTG...GGAAGCGGGAGCGCAAGGCTGCCGTCGAGGAGGACACCTCCCTGTCGGAGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR CCA 90 bp GGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCGAGCCCCAACTGTGGTaGAAATGGCCCCAGAATGGT +
Preference number: 4 (lower is better)
Translates to: GGQREHVDHSRDKVPRPAEPQLW*KWPQNG
Trigger: ACCATTCTGGGGCCATTTCCACCACAGTTGGGGCTC...GGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGGACAGCGTGAGCACGTaGACCATAGCAGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: QVDSVSTWTIAGTRCPGQDSVST*TIAGTR
Trigger: CCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC...CTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAACACATACACTCCACCTaGCAGGTGGACAGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: DSVSTWTIAGTRCPGQPQHIHST*QVDSVS
Trigger: GCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTG...TTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CTGGCAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCACATACACTCCACCTaGCAGGTGGACAGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: LAGGQREHVDHSRDKVPRHIHST*QVDSVS
Trigger: GCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTG...CCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCACCGCGCACACATGCATaGAGCTTCACCTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPPRTHA*SFTFSV
Trigger: GACAGAGAAGGTGAAGCTCCATGCATGTGTGCGCGG...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CCCAGCTACAGGCATGCTGAAGCAGGAGAATCGCTTGCACCCCGGAGGCAGAGGGGCAAGGCGTGTAGCTaGGACCTAGGTCCAGACCCC +
Preference number: 4 (lower is better)
Translates to: PSYRHAEAGESLAPRRQRGKACS*DLGPDP
Trigger: GGGGTCTGGACCTAGGTCCCAGCTACACGCCTTGCC...CCTCTGCCTCCGGGGTGCAAGCGATTCTCCTGCTTCAGCATGCCTGTAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465801.5
CDS-3UTR TCA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAAGTGGTCGCCTCCCAGTaGGTCCCCCAGTGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQVVASQ*VPQWPG
Trigger: GCCGGGCCACTGGGGGACTCACTGGGAGGCGACCAC...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp AAGGGGGAGGCAGGTCTCTATCTCATGGAGCTGTCAGATGAGACATCGCGATCGGGGGCCGGATGGGGCTaGCGAAGCCGGTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: KGEAGLYLMELSDETSRSGAGWG*RSRSAL
Trigger: CAGTGCAGACCGGCTTCGTCAGCCCCATCCGGCCCC...CGATCGCGATGTCTCATCTGACAGCTCCATGAGATAGAGACCTGCCTCCCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR TCA 90 bp CGCAGTGAAAGCAGGAGACTTTCGGTCTCCAGACTGGGTGATGAGCCGGCGGCAAGATGGTGCCGGGCATaGAGCGGGCCGACGAGGAAT +
Preference number: 4 (lower is better)
Translates to: RSESRRLSVSRLGDEPAARWCRA*SGPTRN
Trigger: ATTCCTCGTCGGCCCGCTTCATGCCCGGCACCATCT...TGCCGCCGGCTCATCACCCAGTCTGGAGACCGAAAGTCTCCTGCTTTCACTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR TCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCCGCAGAGCTTGGCGGTaGTGTCGATGCGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: HSLLYRGIVNRISPASPGRRAWR*CRCGGR
Trigger: TCTGCCGCCGCATCGACATCACCGCCAAGCTCTGCG...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCCGCAGAGCTTGGCGGTaGTGTCGATGCGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: ETLSAHTPAHTCMELHLLRRAWR*CRCGGR
Trigger: TCTGCCGCCGCATCGACATCACCGCCAAGCTCTGCG...GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGTCGCAGTTGCGCTGCTaGGCCACATCGCAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: VPIPGTKASLKHGTSTRESQLRC*ATSQSL
Trigger: CAAGCTCTGCGATGTGGCTCAGCAGCGCAACTGCGA...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp TGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGACTCCCTCAGCTGGTTaGGCATGCGCTGCATCTCCT +
Preference number: 4 (lower is better)
Translates to: WPQNGRAKPSSRHPRALETPSAG*ACAASP
Trigger: AGGAGATGCAGCGCATGCTCAACCAGCTGAGGGAGT...CTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCATGCCATGGCATAGCCTaGGAAATCCTCCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPCHGIA*EILPKQ
Trigger: CTGCTTTGGGAGGATTTCTCAGGCTATGCCATGGCA...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCACCTTCTCCCGGGTTTTaGACAGGGACTCCGTATCTT +
Preference number: 4 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPPSPGF*TGTPYL
Trigger: AAGATACGGAGTCCCTGTTCAAAACCCGGGAGAAGG...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCTGGTCAATGGTCTCCTaGTACTCCTTCTCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: GGQREHVDHSRDKVPRPAWSMVS*YSFSRV
Trigger: AACCCGGGAGAAGGAGTATCAGGAGACCATTGACCA...GGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCCTGAGGGAGAAAGCCTaGGGGAGGAGCGCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: HSLLYRGIVNRISPASPGLREKA*GRSAPV
Trigger: GACTGGGGCGCTCCTCCCTCAGGCTTTCTCCCTCAG...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CTGGCAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGTGGAGAAGCCAAGACTaGGGGAGAAAGCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LAGGQREHVDHSRDKVPRWRSQD*GRKPEG
Trigger: TCCCTCAGGCTTTCTCCCTCAGTCTTGGCTTCTCCA...CCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCGCAGACACCCACGCGTaGAGGCAGGAGAGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: HSLLYRGIVNRISPASPGADTHA*RQESPN
Trigger: GTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGC...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GGAAATGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCGATACGTGGACAAGGTaGGGGGCCGCAATCGCTCTG +
Preference number: 4 (lower is better)
Translates to: GNGPRMVGPSLAPDTPEPDTWTR*GAAIAL
Trigger: CAGAGCGATTGCGGCCCCTCACCTTGTCCACGTATC...GGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCATTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp ATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGGCCACGATACGTGGACAAGGTaGGGGGCCGCAATCGCTCTG +
Preference number: 4 (lower is better)
Translates to: IPGTKASLKHGTSTREGHDTWTR*GAAIAL
Trigger: CAGAGCGATTGCGGCCCCTCACCTTGTCCACGTATC...GTGGCCCTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp TGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGCAGTGTGGAAGACAGTaGGCTGGCTCCGGACAACAG +
Preference number: 4 (lower is better)
Translates to: WPQNGRAKPSSRHPRALEQCGRQ*AGSGQQ
Trigger: CTGTTGTCCGGAGCCAGCTCACTGTCTTCCACACTG...CTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAGTTGGTCTCAGTGTATaGCAGACACGGAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPVGLSV*QTRRKH
Trigger: GTGCTTCCTCCGTGTCTGTCATACACTGAGACCAAC...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCAAGGCCCCGCCGGCCCTaGTTACCCTCCTCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSRPRRP*LPSSSA
Trigger: AGCGCTGGAGGAGGGTAAGCAGGGCCGGCGGGGCCT...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCGAAGCCGGTCTGCACTaGCTGGTCGCGACGACCCAG +
Preference number: 4 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLEAGLH*LVATTQ
Trigger: CTGGGTCGTCGCGACCAGGCAGTGCAGACCGGCTTC...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTTAGCACCACCCACCCCATCCGGGTaGACCCACGACAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RSLQLHSIPLQCLGQLAPPTPSG*THDKPG
Trigger: GCCTGGCTTGTCGTGGGTGCACCCGGATGGGGTGGG...TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCTGGTTGAGCATGCGCTaGATCTCCTCGTTGATGCTG +
Preference number: 4 (lower is better)
Translates to: GGQREHVDHSRDKVPRPAWLSMR*ISSLML
Trigger: CAGCATCAACGAGGAGATGCAGCGCATGCTCAACCA...GGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTTGCGAGGGCCTCGGGTaGAAGGGGGAGGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: SPAACAAEAMRSLQLHSICEGLG*KGEAGL
Trigger: GAGACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCA...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GGAAATGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCCAGGGACCGGCCTGGTaGAGAGCTGCAGCTGATGTT +
Preference number: 4 (lower is better)
Translates to: GNGPRMVGPSLAPDTPEPQGPAW*RAAADV
Trigger: AACATCAGCTGCAGCTCTGCACCAGGCCGGTCCCTG...GGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCATTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCATCTATTCCACTCCAGTaGCTGGGCCAGTTAGCACCA +
Preference number: 4 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPSIPLQ*LGQLAP
Trigger: TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGA...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CACAGATCCGGGCTCCCGCCTCCTGCCCGCACCAGAACAGAGCTCGTCGAGCCCTGCGTAGCCTCCAGCTaGATTCTATTCCACTCCAGT +
Preference number: 4 (lower is better)
Translates to: HRSGLPPPARTRTELVEPCVASS*ILFHSS
Trigger: ACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCA...GGGCTCGACGAGCTCTGTTCTGGTGCGGGCAGGAGGCGGGAGCCCGGATCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR GCA 90 bp TGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGGTGCTGCAGAGGCCATaGGTAGCCTCCAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: WPQNGRAKPSSRHPRALEVLQRP*VASSCI
Trigger: AATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCAC...CTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAACCCTTCAAAACACTGTaGCCATCCCGGGCACTAAGG +
Preference number: 4 (lower is better)
Translates to: DSVSTWTIAGTRCPGQPQPFKTL*PSRALR
Trigger: CCTTAGTGCCCGGGATGGGCACAGTGTTTTGAAGGG...TTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGACACCCGCGCACACATaGATGGAGCTTCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: QVDSVSTWTIAGTRCPGQTPAHT*MELHLL
Trigger: GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGT...CTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGGCTCGTCGAGCCCGCTaGCCTGCCTCTTGTGGTATC +
Preference number: 4 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWARRAR*PASCGI
Trigger: GATACCACAAGAGGCAGGGCAGCGGGCTCGACGAGC...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465801.5
ENST00000487279.6
CDS-3UTR GCA 90 bp CGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTTAGCACCACGGGCTCCCGCCTCCTaGCCGCACCAGAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: RSLQLHSIPLQCLGQLAPRAPAS*PHQNRA
Trigger: AGCTCTGTTCTGGTGCGGGCAGGAGGCGGGAGCCCG...TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465801.5
ENST00000487279.6
CDS-3UTR CCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCACGAATAACGGATTCATaGCTGCGCCTTCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPRITDS*LRLLLG
Trigger: TCCCAGCAGAAGGCGCAGCCATGAATCCGTTATTCG...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
CDS-3UTR CCA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTGCCCTTGCACCAGAGTaGGCTCCAGTCCCGGCCCGA +
Preference number: 4 (lower is better)
Translates to: RDPERTYTRAHMHGASPSALAPE*APVPAR
Trigger: TCGGGCCGGGACTGGAGCCCACTCTGGTGCAAGGGC...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGACACGGTCTTGCAGCTaGATCCGCACCGTGTACTCC +
Preference number: 4 (lower is better)
Translates to: WPQNGRAKPSSRHPRALETRSCS*IRTVYS
Trigger: GGAGTACACGGTGCGGATCCAGCTGCAAGACCGTGT...CTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGAAATGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCCAGGCATCAGCCTCCTaGGCTTCCTCCTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GNGPRMVGPSLAPDTPEPQASAS*ASSWSS
Trigger: TGAGCTCCAGGAGGAAGCCCAGGAGGCTGATGCCTG...GGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCATTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCTTTCTCCTGGATCTTaGTGTCCAGCTCCGACAGGT +
Preference number: 4 (lower is better)
Translates to: GGQREHVDHSRDKVPRPALSPGS*CPAPTG
Trigger: ACCTGTCGGAGCTGGACACCAAGATCCAGGAGAAAG...GGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCTCATACTCCCTCAGCTaGTTGAGCATGCGCTGCATC +
Preference number: 4 (lower is better)
Translates to: GGQREHVDHSRDKVPRPASYSLS*LSMRCI
Trigger: GATGCAGCGCATGCTCAACCAGCTGAGGGAGTATGA...GGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCACCTCTGCAGCTGCCATaGCATAGCCTGAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPPLQLP*HSLRNP
Trigger: AGGATTTCTCAGGCTATGCCATGGCAGCTGCAGAGG...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCATGTCGTTCTTGGCCGTaGCCAACTCCAGCTCTATCT +
Preference number: 4 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPCRSWP*PTPALS
Trigger: AGATAGAGCTGGAGTTGGCCACGGCCAAGAACGACA...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAAGTCCTCAGCCTCGCTTaGCGGCGGCGGCGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQVLSLA*RRRRVA
Trigger: AGCGACCCGCCGCCGCCGCCAAGCGAGGCTGAGGAC...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TCGTCCTCAAAATCATACTCCCTCAGCTGGTTGAGCATGCGCTGCATCTCCTCGGTCCTCAGCCTCGCTTaGCGGCGGCGGCGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: SSSKSYSLSWLSMRCISSVLSLA*RRRRVA
Trigger: AGCGACCCGCCGCCGCCGCCAAGCGAGGCTGAGGAC...CGAGGAGATGCAGCGCATGCTCAACCAGCTGAGGGAGTATGATTTTGAGGACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR CCA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCCCCAGGGACCGGCCTaGTGCAGAGCTGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLPQGPA*CRAAAD
Trigger: ATCAGCTGCAGCTCTGCACCAGGCCGGTCCCTGGGG...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGGGAGAGCCCCAACTGTaGTGGAAATGGCCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: QVDSVSTWTIAGTRCPGQGEPQL*WKWPQN
Trigger: ATTCTGGGGCCATTTCCACCACAGTTGGGGCTCTCC...CTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCGGGCCGCAATCGCTCTaGCAGCATTTTAAAGATGGG +
Preference number: 4 (lower is better)
Translates to: GGQREHVDHSRDKVPRPAGPQSL*QHFKDG
Trigger: CCCATCTTTAAAATGCTGCCAGAGCGATTGCGGCCC...GGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGAGACAGCGTGAGCACGTaGACCATAGCAGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: GPRMVGPSLAPDTPEPWRDSVST*TIAGTR
Trigger: CCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC...TCTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGACACATACACTCCACCTaGCAGGTGGACAGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: GPRMVGPSLAPDTPEPWRHIHST*QVDSVS
Trigger: GCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTG...TCTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGGACACTGTAGCCTGTTaGTCTCAGTGTATGACAGAC +
Preference number: 4 (lower is better)
Translates to: SPTLCLAELPAARASGARDTVAC*SQCMTD
Trigger: GTCTGTCATACACTGAGACCAACAGGCTACAGTGTC...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCGCAGAGCTTGGCGGTaGTGTCGATGCGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: RDPERTYTRAHMHGASPSRRAWR*CRCGGR
Trigger: TCTGCCGCCGCATCGACATCACCGCCAAGCTCTGCG...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCTCGCAGTTGCGCTGCTaGGCCACATCGCAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: AEAMRSLQLHSIPLQCLGSQLRC*ATSQSL
Trigger: CAAGCTCTGCGATGTGGCTCAGCAGCGCAACTGCGA...GCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCTTCTCCCGGGTTTTaGACAGGGACTCCGTATCTT +
Preference number: 4 (lower is better)
Translates to: QVDSVSTWTIAGTRCPGQPSPGF*TGTPYL
Trigger: AAGATACGGAGTCCCTGTTCAAAACCCGGGAGAAGG...CTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGTGGTCAATGGTCTCCTaGTACTCCTTCTCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: QVDSVSTWTIAGTRCPGQWSMVS*YSFSRV
Trigger: AACCCGGGAGAAGGAGTATCAGGAGACCATTGACCA...CTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp TGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGCATGGAGCTGTCAGATaGGACATCGCGATCGGAGTC +
Preference number: 4 (lower is better)
Translates to: WPQNGRAKPSSRHPRALEHGAVR*DIAIGV
Trigger: GACTCCGATCGCGATGTCTCATCTGACAGCTCCATG...CTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGATGGAGAAGCCAAGACTaGGGGAGAAAGCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: GPRMVGPSLAPDTPEPWRWRSQD*GRKPEG
Trigger: TCCCTCAGGCTTTCTCCCTCAGTCTTGGCTTCTCCA...TCTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCGATACGTGGACAAGGTaGGGGGCCGCAATCGCTCTG +
Preference number: 4 (lower is better)
Translates to: AEAMRSLQLHSIPLQCLGDTWTR*GAAIAL
Trigger: CAGAGCGATTGCGGCCCCTCACCTTGTCCACGTATC...GCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp ATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGGCCACCAGTGTGGAAGACAGTaGGCTGGCTCCGGACAACAG +
Preference number: 4 (lower is better)
Translates to: IPGTKASLKHGTSTREGHQCGRQ*AGSGQQ
Trigger: CTGTTGTCCGGAGCCAGCTCACTGTCTTCCACACTG...GTGGCCCTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp TGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCTCTATCTCATGGAGCTGTCACAGTGTGGAAGACAGTaGGCTGGCTCCGGACAACAG +
Preference number: 4 (lower is better)
Translates to: CEGLGCKGEAGLYLMELSQCGRQ*AGSGQQ
Trigger: CTGTTGTCCGGAGCCAGCTCACTGTCTTCCACACTG...TGACAGCTCCATGAGATAGAGACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR TCA 90 bp CAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGTCTGTCATTCTGCAGTaGCCAGGAGAGCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: QVDSVSTWTIAGTRCPGQSVILQ*PGEQEL
Trigger: GAGCTCTTGCTCTCCTGGTCACTGCAGAATGACAGA...CTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GGAAATGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCCTTAAACAGAGACCCTaGGCGCACATACACCCGCGC +
Preference number: 4 (lower is better)
Translates to: GNGPRMVGPSLAPDTPEPLKQRP*AHIHPR
Trigger: GCGCGGGTGTATGTGCGCTCAGGGTCTCTGTTTAAG...GGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCATTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTGGCCCGGCCAGGCCCTaGTGCTCCTGCTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSGPARP*CSCCRR
Trigger: CCTCCTGCAGCAGGAGCAGCAGGGCCTGGCCGGGCC...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GTCCTCAAAATCATACTCCCTCAGCTGGTTGAGCATGCGCTGCATCTCCTCGTTGGCCCGGCCAGGCCCTaGTGCTCCTGCTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VLKIILPQLVEHALHLLVGPARP*CSCCRR
Trigger: CCTCCTGCAGCAGGAGCAGCAGGGCCTGGCCGGGCC...AACGAGGAGATGCAGCGCATGCTCAACCAGCTGAGGGAGTATGATTTTGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR GCA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCAGGCCCGGCCAGGCCCTaGTGCTCCTGCTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSGPARP*CSCCRR
Trigger: CCTCCTGCAGCAGGAGCAGCAGGGCCTGGCCGGGCC...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGTGGTTGAGCATGCGCTaGATCTCCTCGTTGATGCTG +
Preference number: 4 (lower is better)
Translates to: QVDSVSTWTIAGTRCPGQWLSMR*ISSLML
Trigger: CAGCATCAACGAGGAGATGCAGCGCATGCTCAACCA...CTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAATGGTTGAGCATGCGCTaGATCTCCTCGTTGATGCTG +
Preference number: 4 (lower is better)
Translates to: DSVSTWTIAGTRCPGQPQWLSMR*ISSLML
Trigger: CAGCATCAACGAGGAGATGCAGCGCATGCTCAACCA...TTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CTGGCAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGTCTATTCCACTCCAGTaGCTGGGCCAGTTAGCACCA +
Preference number: 4 (lower is better)
Translates to: LAGGQREHVDHSRDKVPRSIPLQ*LGQLAP
Trigger: TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGA...CCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCATGCGTAGCCTCCAGCTaGATTCTATTCCACTCCAGT +
Preference number: 4 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPCVASS*ILFHSS
Trigger: ACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCA...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp ATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGGCCACGTGCTGCAGAGGCCATaGGTAGCCTCCAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: IPGTKASLKHGTSTREGHVLQRP*VASSCI
Trigger: AATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCAC...GTGGCCCTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGTGCTGCAGAGGCCATaGGTAGCCTCCAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: VPIPGTKASLKHGTSTREVLQRP*VASSCI
Trigger: AATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCAC...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AAGGGGGAGGCAGGTCTCTATCTCATGGAGCTGTCAGATGAGACATCGCGATCGCCTCCCCCGGCGAAGTaGTCGCCTCCCAGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: KGEAGLYLMELSDETSRSPPPAK*SPPSES
Trigger: GGACTCACTGGGAGGCGACCACTTCGCCGGGGGAGG...CGATCGCGATGTCTCATCTGACAGCTCCATGAGATAGAGACCTGCCTCCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR CCA 90 bp TGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGAATAGGTGGTGGAGGTaGAGGTGGAGGACGACGAGA +
Preference number: 4 (lower is better)
Translates to: WPQNGRAKPSSRHPRALENRWWR*RWRTTR
Trigger: TCTCGTCGTCCTCCACCTCCACCTCCACCACCTATT...CTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCAGCCCTTGCACCAGAGTaGGCTCCAGTCCCGGCCCGA +
Preference number: 4 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSALAPE*APVPAR
Trigger: TCGGGCCGGGACTGGAGCCCACTCTGGTGCAAGGGC...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CTGGCAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGTCCTGGGCTTCCTCCTaGAGCTCATTTACACGGTCT +
Preference number: 4 (lower is better)
Translates to: LAGGQREHVDHSRDKVPRSWASS*SSFTRS
Trigger: AGACCGTGTAAATGAGCTCCAGGAGGAAGCCCAGGA...CCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGAGGTTCATGTCGTTCTTaGCCGTGGCCAACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GPRMVGPSLAPDTPEPWRGSCRS*PWPTPA
Trigger: AGCTGGAGTTGGCCACGGCCAAGAACGACATGAACC...TCTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGTTTCGGTCTCCAGACTaGGTGATGAGCCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWFRSPD*VMSRRQ
Trigger: CTGCCGCCGGCTCATCACCCAGTCTGGAGACCGAAA...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGCAACTGTGGTGGAAATaGCCCCAGAATGGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: WPQNGRAKPSSRHPRALEQLWWK*PQNGRA
Trigger: GGCCCTACCATTCTGGGGCCATTTCCACCACAGTTG...CTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGGGGCCGCAATCGCTCTaGCAGCATTTTAAAGATGGG +
Preference number: 4 (lower is better)
Translates to: QVDSVSTWTIAGTRCPGQGPQSL*QHFKDG
Trigger: CCCATCTTTAAAATGCTGCCAGAGCGATTGCGGCCC...CTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAACAGTTAGCACCAGTGTaGAAGACAGTGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: DSVSTWTIAGTRCPGQPQQLAPV*KTVSWL
Trigger: GAGCCAGCTCACTGTCTTCCACACTGGTGCTAACTG...TTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp ATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGGCCACGACAGCGTGAGCACGTaGACCATAGCAGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: IPGTKASLKHGTSTREGHDSVST*TIAGTR
Trigger: CCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC...GTGGCCCTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCTCTATCTCATGGAGCTGTCAGACAGCGTGAGCACGTaGACCATAGCAGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: CEGLGCKGEAGLYLMELSDSVST*TIAGTR
Trigger: CCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC...TGACAGCTCCATGAGATAGAGACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR CCA 90 bp CTGGCAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGGGGACCTGGAACATCTaGATCATGTCCTCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LAGGQREHVDHSRDKVPRGTWNI*IMSSQL
Trigger: CAACTGCGAGGACATGATCCAGATGTTCCAGGTCCC...CCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396840.6
ENST00000487279.6
CDS-3UTR TCA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTAGATGGTGCCGGGCATaGAGCGGGCCGACGAGGAAT +
Preference number: 4 (lower is better)
Translates to: RDPERTYTRAHMHGASPSRWCRA*SGPTRN
Trigger: ATTCCTCGTCGGCCCGCTTCATGCCCGGCACCATCT...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGATGCCATGGCATAGCCTaGGAAATCCTCCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: GPRMVGPSLAPDTPEPWRCHGIA*EILPKQ
Trigger: CTGCTTTGGGAGGATTTCTCAGGCTATGCCATGGCA...TCTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCGTGCAGAGCTGCAGCTaGTGTTCCCCTCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLVQSCS*CSPLCS
Trigger: GCTGCACAGAGGGGAACATCAGCTGCAGCTCTGCAC...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp TGGAGCTCATTTACACGGTCTTGCAGCTGGATCCGCACCGTGTACTCCTCTTCCCTGAGGGAGAAAGCCTaGGGGAGGAGCGCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: WSSFTRSCSWIRTVYSSSLREKA*GRSAPV
Trigger: GACTGGGGCGCTCCTCCCTCAGGCTTTCTCCCTCAG...GGAAGAGGAGTACACGGTGCGGATCCAGCTGCAAGACCGTGTAAATGAGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR TCA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCGATACGTGGACAAGGTaGGGGGCCGCAATCGCTCTG +
Preference number: 4 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLDTWTR*GAAIAL
Trigger: CAGAGCGATTGCGGCCCCTCACCTTGTCCACGTATC...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCGATACGTGGACAAGGTaGGGGGCCGCAATCGCTCTG +
Preference number: 4 (lower is better)
Translates to: ETLSAHTPAHTCMELHLLDTWTR*GAAIAL
Trigger: CAGAGCGATTGCGGCCCCTCACCTTGTCCACGTATC...GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCAACGCCCTCTGCCGCTaGCAGGGACAGAAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSNALCR*QGQKPS
Trigger: AGAGGGCTTCTGTCCCTGTCAGCGGCAGAGGGCGTT...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGAGTTGGTCTCAGTGTATaGCAGACACGGAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: GPRMVGPSLAPDTPEPWRVGLSV*QTRRKH
Trigger: GTGCTTCCTCCGTGTCTGTCATACACTGAGACCAAC...TCTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GGAAATGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCAGCGCTTGCTGCAGTTaGTTCTCCAACAGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: GNGPRMVGPSLAPDTPEPSACCS*FSNSRF
Trigger: GAACCGGCTGTTGGAGAAGCAACTGCAGCAAGCGCT...GGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCATTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp ATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGGCCACTCCTCCAGCGCTTGCTaGAGTTGCTTCTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: IPGTKASLKHGTSTREGHSSSAC*SCFSNS
Trigger: GCTGTTGGAGAAGCAACTGCAGCAAGCGCTGGAGGA...GTGGCCCTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTTAGCACCACTGACGAAGCCGGTCTaGACTGCCTGGTCGCGACGA +
Preference number: 4 (lower is better)
Translates to: RSLQLHSIPLQCLGQLAPLTKPV*TAWSRR
Trigger: TCGTCGCGACCAGGCAGTGCAGACCGGCTTCGTCAG...TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp TGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGTCATTTACACGGTCTTaGAGCTGGATCCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: WPQNGRAKPSSRHPRALESFTRS*SWIRTV
Trigger: CACGGTGCGGATCCAGCTGCAAGACCGTGTAAATGA...CTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTTAGCACCACTCTCCCTGGGCCTCTaGAGCTGCCATGGCATAGCC +
Preference number: 4 (lower is better)
Translates to: RSLQLHSIPLQCLGQLAPLSLGL*SCHGIA
Trigger: GGCTATGCCATGGCAGCTGCAGAGGCCCAGGGAGAG...TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCCTCTCCCTGGGCCTCTaGAGCTGCCATGGCATAGCC +
Preference number: 4 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSLSLGL*SCHGIA
Trigger: GGCTATGCCATGGCAGCTGCAGAGGCCCAGGGAGAG...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCTCCAGGCTATCTTCCTaGTCTCCCTGGGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AEAMRSLQLHSIPLQCLGSRLSS*SPWASA
Trigger: TGCAGAGGCCCAGGGAGAGCAGGAAGATAGCCTGGA...GCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336604.8
ENST00000396840.6
ENST00000465801.5
CDS-3UTR GCA 90 bp GCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCGTGCTGCAGAGGCCATaGGTAGCCTCCAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: AEAMRSLQLHSIPLQCLGVLQRP*VASSCI
Trigger: AATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCAC...GCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCGAAGCCCTCTCCAGCTaGGTGTGCTGCAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: ETLSAHTPAHTCMELHLLEALSS*VCCRGH
Trigger: ATGGCCTCTGCAGCACACGCAGCTGGAGAGGGCTTC...GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCCTTCTGCTGGGAGATaGAGACCGGTGCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLPSAGR*RPVQEQ
Trigger: CTGCTCCTGCACCGGTCTGCATCTCCCAGCAGAAGG...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356896.8
CDS-3UTR GCA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCCCGGAGGCAGAGGCTaGAGTGAGCTGAGACCACAC +
Preference number: 4 (lower is better)
Translates to: TETLSAHTPAHTCMELHLPGGRG*SELRPH
Trigger: GTGTGGTCTCAGCTCACTGCAGCCTCTGCCTCCGGG...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465801.5
CDS-3UTR CCA 90 bp GGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGACTTTCTCCTGGATCTTaGTGTCCAGCTCCGACAGGT +
Preference number: 4 (lower is better)
Translates to: GPRMVGPSLAPDTPEPWRLSPGS*CPAPTG
Trigger: ACCTGTCGGAGCTGGACACCAAGATCCAGGAGAAAG...TCTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGATCATACTCCCTCAGCTaGTTGAGCATGCGCTGCATC +
Preference number: 4 (lower is better)
Translates to: GPRMVGPSLAPDTPEPWRSYSLS*LSMRCI
Trigger: GATGCAGCGCATGCTCAACCAGCTGAGGGAGTATGA...TCTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGAAATGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCCAACTGTGGTGGAAATaGCCCCAGAATGGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: GNGPRMVGPSLAPDTPEPQLWWK*PQNGRA
Trigger: GGCCCTACCATTCTGGGGCCATTTCCACCACAGTTG...GGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCATTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCTCTATCTCATGGAGCTGTCAGAGCCCCAACTGTGGTaGAAATGGCCCCAGAATGGT +
Preference number: 4 (lower is better)
Translates to: CEGLGCKGEAGLYLMELSEPQLW*KWPQNG
Trigger: ACCATTCTGGGGCCATTTCCACCACAGTTGGGGCTC...TGACAGCTCCATGAGATAGAGACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR CCA 90 bp TGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCTCTATCTCATGGAGCTGTCAGGAGAGCCCCAACTGTaGTGGAAATGGCCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: CEGLGCKGEAGLYLMELSGEPQL*WKWPQN
Trigger: ATTCTGGGGCCATTTCCACCACAGTTGGGGCTCTCC...TGACAGCTCCATGAGATAGAGACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR CCA 90 bp GGAAATGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCGGAGAGCCCCAACTGTaGTGGAAATGGCCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: GNGPRMVGPSLAPDTPEPGEPQL*WKWPQN
Trigger: ATTCTGGGGCCATTTCCACCACAGTTGGGGCTCTCC...GGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCATTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGACAGTTAGCACCAGTGTaGAAGACAGTGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GPRMVGPSLAPDTPEPWRQLAPV*KTVSWL
Trigger: GAGCCAGCTCACTGTCTTCCACACTGGTGCTAACTG...TCTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGCACATACACTCCACCTaGCAGGTGGACAGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWHIHST*QVDSVS
Trigger: GCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTG...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR CAA 72 bp TCCCTCAGCTGGTTGAGCATGCGCTGCATCTCCTCGTaGATGCTGAGGGCTGTGCTCTCCTCCTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: SLSWLSMRCISS*MLRAVLSSSSP
Trigger: TGGGGATGAGGAGGAGAGCACAGCCCTCAGCATCAACGAGGAGATGCAGCGCATGCTCAACCAGCTGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR TCA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTTCGCAGTTGCGCTGCTaGGCCACATCGCAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: RDPERTYTRAHMHGASPSSQLRC*ATSQSL
Trigger: CAAGCTCTGCGATGTGGCTCAGCAGCGCAACTGCGA...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCACTCCCTCAGCTGGTTaGGCATGCGCTGCATCTCCT +
Preference number: 4 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLTPSAG*ACAASP
Trigger: AGGAGATGCAGCGCATGCTCAACCAGCTGAGGGAGT...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAACTGAGGGAGAAAGCCTaGGGGAGGAGCGCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQLREKA*GRSAPV
Trigger: GACTGGGGCGCTCCTCCCTCAGGCTTTCTCCCTCAG...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCGATACGTGGACAAGGTaGGGGGCCGCAATCGCTCTG +
Preference number: 4 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSDTWTR*GAAIAL
Trigger: CAGAGCGATTGCGGCCCCTCACCTTGTCCACGTATC...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCAAACGCCCTCTGCCGCTaGCAGGGACAGAAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSNALCR*QGQKPS
Trigger: AGAGGGCTTCTGTCCCTGTCAGCGGCAGAGGGCGTT...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGTCTGTCATTCTGCAGTaGCCAGGAGAGCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: VPIPGTKASLKHGTSTRESVILQ*PGEQEL
Trigger: GAGCTCTTGCTCTCCTGGTCACTGCAGAATGACAGA...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCTTAAACAGAGACCCTaGGCGCACATACACCCGCGC +
Preference number: 4 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLLKQRP*AHIHPR
Trigger: GCGCGGGTGTATGTGCGCTCAGGGTCTCTGTTTAAG...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GGAAATGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCGTTGGTCTCAGTGTATaGCAGACACGGAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: GNGPRMVGPSLAPDTPEPVGLSV*QTRRKH
Trigger: GTGCTTCCTCCGTGTCTGTCATACACTGAGACCAAC...GGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCATTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp ATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGGCCACTATACCGAGGCATTGTaGACCGCATCTCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: IPGTKASLKHGTSTREGHYTEAL*TASPQL
Trigger: AAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATA...GTGGCCCTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTGGAGTCACAGAGAGGTaGCCAGACTGGCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TETLSAHTPAHTCMELHLGVTER*PDWLRG
Trigger: GCCTCTGAGCCAGTCTGGTCACCTCTCTGTGACTCC...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465801.5
CDS-3UTR GCA 90 bp CGCAGTGAAAGCAGGAGACTTTCGGTCTCCAGACTGGGTGATGAGCCGGCGGCATCCTCCAGCGCTTGCTaGAGTTGCTTCTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: RSESRRLSVSRLGDEPAASSSAC*SCFSNS
Trigger: GCTGTTGGAGAAGCAACTGCAGCAAGCGCTGGAGGA...TGCCGCCGGCTCATCACCCAGTCTGGAGACCGAAAGTCTCCTGCTTTCACTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR GCA 90 bp TCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGACCGAGCCGGCGGGCGTaGGAGAACGACCAGATGGTG +
Preference number: 4 (lower is better)
Translates to: SGQQGWRKGPTFTFLIRGPSRRA*ENDQMV
Trigger: CACCATCTGGTCGTTCTCGCACGCCCGCCGGCTCGG...TCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCACCGAGCCGGCGGGCGTaGGAGAACGACCAGATGGTG +
Preference number: 4 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSPSRRA*ENDQMV
Trigger: CACCATCTGGTCGTTCTCGCACGCCCGCCGGCTCGG...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCACCCACCCCATCCGGGTaGACCCACGACAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSPTPSG*THDKPG
Trigger: GCCTGGCTTGTCGTGGGTGCACCCGGATGGGGTGGG...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CACAGCCACATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTGGACCATATCATGTCCTCGCAGTTaGGCTGCTGAGCCACATCGC +
Preference number: 4 (lower is better)
Translates to: HSHIHSTWQVDSVSTWTISCPRS*AAEPHR
Trigger: GCGATGTGGCTCAGCAGCGCAACTGCGAGGACATGA...TATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTGGCTGTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGTGGTTGAGCATGCGCTaGATCTCCTCGTTGATGCTG +
Preference number: 4 (lower is better)
Translates to: VPIPGTKASLKHGTSTREWLSMR*ISSLML
Trigger: CAGCATCAACGAGGAGATGCAGCGCATGCTCAACCA...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp TGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGTGCGTAGCCTCCAGCTaGATTCTATTCCACTCCAGT +
Preference number: 4 (lower is better)
Translates to: WPQNGRAKPSSRHPRALECVASS*ILFHSS
Trigger: ACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCA...CTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTGAAGCCCTCTCCAGCTaGGTGTGCTGCAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: RDPERTYTRAHMHGASPSEALSS*VCCRGH
Trigger: ATGGCCTCTGCAGCACACGCAGCTGGAGAGGGCTTC...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAAATAGCAGGGACAAGGTaGCCCGGCCAGCCCCAACGC +
Preference number: 4 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQIAGTR*PGQPQR
Trigger: GCGTTGGGGCTGGCCGGGGCACCTTGTCCCTGCTAT...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCAGGCTATCTTCCTGCTaGTCTCCCTGGGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ETLSAHTPAHTCMELHLLRLSSC*SPWASA
Trigger: TGCAGAGGCCCAGGGAGAGCAGCAGGAAGATAGCCT...GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356896.8
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCAGCTCGTCGAGCCCGCTaGCCTGCCTCTTGTGGTATC +
Preference number: 4 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSARRAR*PASCGI
Trigger: GATACCACAAGAGGCAGGGCAGCGGGCTCGACGAGC...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465801.5
ENST00000487279.6
CDS-3UTR CCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTCCTCCCCCGGCGAAGTaGTCGCCTCCCAGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSPPPAK*SPPSES
Trigger: GGACTCACTGGGAGGCGACCACTTCGCCGGGGGAGG...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGAATAGGTGGTGGAGGTaGAGGTGGAGGACGACGAGA +
Preference number: 4 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWNRWWR*RWRTTR
Trigger: TCTCGTCGTCCTCCACCTCCACCTCCACCACCTATT...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCAATAGGTGGTGGAGGTaGAGGTGGAGGACGACGAGA +
Preference number: 4 (lower is better)
Translates to: AEAMRSLQLHSIPLQCLGNRWWR*RWRTTR
Trigger: TCTCGTCGTCCTCCACCTCCACCTCCACCACCTATT...GCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GTCGCTAAGCGGGACCGCAGTGAAAGCAGGAGACTTTCGGTCTCCAGACTGGGTACACGGTCTTGCAGCTaGATCCGCACCGTGTACTCC +
Preference number: 4 (lower is better)
Translates to: VAKRDRSESRRLSVSRLGTRSCS*IRTVYS
Trigger: GGAGTACACGGTGCGGATCCAGCTGCAAGACCGTGT...ACCCAGTCTGGAGACCGAAAGTCTCCTGCTTTCACTGCGGTCCCGCTTAGCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR CCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCACACGGTCTTGCAGCTaGATCCGCACCGTGTACTCC +
Preference number: 4 (lower is better)
Translates to: HSLLYRGIVNRISPASPGTRSCS*IRTVYS
Trigger: GGAGTACACGGTGCGGATCCAGCTGCAAGACCGTGT...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCCAGGCATCAGCCTCCTaGGCTTCCTCCTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSQASAS*ASSWSS
Trigger: TGAGCTCCAGGAGGAAGCCCAGGAGGCTGATGCCTG...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCTTTCGGTCTCCAGACTaGGTGATGAGCCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSFRSPD*VMSRRQ
Trigger: CTGCCGCCGGCTCATCACCCAGTCTGGAGACCGAAA...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTTAGCACCATTTCGGTCTCCAGACTaGGTGATGAGCCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RSLQLHSIPLQCLGQLAPFRSPD*VMSRRQ
Trigger: CTGCCGCCGGCTCATCACCCAGTCTGGAGACCGAAA...TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAACCCCAGGGACCGGCCTaGTGCAGAGCTGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQPQGPA*CRAAAD
Trigger: ATCAGCTGCAGCTCTGCACCAGGCCGGTCCCTGGGG...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGAAATGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCCAGTTAGCACCAGTGTaGAAGACAGTGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GNGPRMVGPSLAPDTPEPQLAPV*KTVSWL
Trigger: GAGCCAGCTCACTGTCTTCCACACTGGTGCTAACTG...GGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCATTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCTCTATCTCATGGAGCTGTCAGGGACCTGGAACATCTaGATCATGTCCTCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: CEGLGCKGEAGLYLMELSGTWNI*IMSSQL
Trigger: CAACTGCGAGGACATGATCCAGATGTTCCAGGTCCC...TGACAGCTCCATGAGATAGAGACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR TCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTCGCAGAGCTTGGCGGTaGTGTCGATGCGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSRRAWR*CRCGGR
Trigger: TCTGCCGCCGCATCGACATCACCGCCAAGCTCTGCG...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTACTCCCTCAGCTGGTTaGGCATGCGCTGCATCTCCT +
Preference number: 4 (lower is better)
Translates to: RDPERTYTRAHMHGASPSTPSAG*ACAASP
Trigger: AGGAGATGCAGCGCATGCTCAACCAGCTGAGGGAGT...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCCTTCTCCCGGGTTTTaGACAGGGACTCCGTATCTT +
Preference number: 4 (lower is better)
Translates to: AEAMRSLQLHSIPLQCLGPSPGF*TGTPYL
Trigger: AAGATACGGAGTCCCTGTTCAAAACCCGGGAGAAGG...GCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCCATGGAGCTGTCAGATaGGACATCGCGATCGGAGTC +
Preference number: 4 (lower is better)
Translates to: HSLLYRGIVNRISPASPGHGAVR*DIAIGV
Trigger: GACTCCGATCGCGATGTCTCATCTGACAGCTCCATG...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCCAGTGTGGAAGACAGTaGGCTGGCTCCGGACAACAG +
Preference number: 4 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSQCGRQ*AGSGQQ
Trigger: CTGTTGTCCGGAGCCAGCTCACTGTCTTCCACACTG...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAAAACGCCCTCTGCCGCTaGCAGGGACAGAAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQNALCR*QGQKPS
Trigger: AGAGGGCTTCTGTCCCTGTCAGCGGCAGAGGGCGTT...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTTAGCACCACTTAAACAGAGACCCTaGGCGCACATACACCCGCGC +
Preference number: 4 (lower is better)
Translates to: RSLQLHSIPLQCLGQLAPLKQRP*AHIHPR
Trigger: GCGCGGGTGTATGTGCGCTCAGGGTCTCTGTTTAAG...TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CACAGCCACATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTGGACCATATCCTCCAGCGCTTGCTaGAGTTGCTTCTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: HSHIHSTWQVDSVSTWTISSSAC*SCFSNS
Trigger: GCTGTTGGAGAAGCAACTGCAGCAAGCGCTGGAGGA...TATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTGGCTGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCTCCTCCAGCGCTTGCTaGAGTTGCTTCTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLSSSAC*SCFSNS
Trigger: GCTGTTGGAGAAGCAACTGCAGCAAGCGCTGGAGGA...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAACTGACGAAGCCGGTCTaGACTGCCTGGTCGCGACGA +
Preference number: 4 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQLTKPV*TAWSRR
Trigger: TCGTCGCGACCAGGCAGTGCAGACCGGCTTCGTCAG...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCGAGCCGGCGGGCGTaGGAGAACGACCAGATGGTG +
Preference number: 4 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLPSRRA*ENDQMV
Trigger: CACCATCTGGTCGTTCTCGCACGCCCGCCGGCTCGG...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTTCATGTCCTCGCAGTTaGGCTGCTGAGCCACATCGC +
Preference number: 4 (lower is better)
Translates to: SPAACAAEAMRSLQLHSISCPRS*AAEPHR
Trigger: GCGATGTGGCTCAGCAGCGCAACTGCGAGGACATGA...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTTAGCACCATCATGTCCTCGCAGTTaGGCTGCTGAGCCACATCGC +
Preference number: 4 (lower is better)
Translates to: RSLQLHSIPLQCLGQLAPSCPRS*AAEPHR
Trigger: GCGATGTGGCTCAGCAGCGCAACTGCGAGGACATGA...TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTTCATGTCCTCGCAGTTaGGCTGCTGAGCCACATCGC +
Preference number: 4 (lower is better)
Translates to: RDPERTYTRAHMHGASPSSCPRS*AAEPHR
Trigger: GCGATGTGGCTCAGCAGCGCAACTGCGAGGACATGA...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAACTCTCCCTGGGCCTCTaGAGCTGCCATGGCATAGCC +
Preference number: 4 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQLSLGL*SCHGIA
Trigger: GGCTATGCCATGGCAGCTGCAGAGGCCCAGGGAGAG...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGTCTATTCCACTCCAGTaGCTGGGCCAGTTAGCACCA +
Preference number: 4 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWSIPLQ*LGQLAP
Trigger: TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGA...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCTCTATTCCACTCCAGTaGCTGGGCCAGTTAGCACCA +
Preference number: 4 (lower is better)
Translates to: AEAMRSLQLHSIPLQCLGSIPLQ*LGQLAP
Trigger: TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGA...GCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTGTGCTGCAGAGGCCATaGGTAGCCTCCAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: RDPERTYTRAHMHGASPSVLQRP*VASSCI
Trigger: AATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCAC...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp TCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGAATAGCAGGGACAAGGTaGCCCGGCCAGCCCCAACGC +
Preference number: 4 (lower is better)
Translates to: SGQQGWRKGPTFTFLIRGIAGTR*PGQPQR
Trigger: GCGTTGGGGCTGGCCGGGGCACCTTGTCCCTGCTAT...TCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCCCCTTCAAAACACTGTaGCCATCCCGGGCACTAAGG +
Preference number: 4 (lower is better)
Translates to: HSLLYRGIVNRISPASPGPFKTL*PSRALR
Trigger: CCTTAGTGCCCGGGATGGGCACAGTGTTTTGAAGGG...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCACACCCGCGCACACATaGATGGAGCTTCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: HSLLYRGIVNRISPASPGTPAHT*MELHLL
Trigger: GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGT...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GTCGCTAAGCGGGACCGCAGTGAAAGCAGGAGACTTTCGGTCTCCAGACTGGGTACACCCGCGCACACATaGATGGAGCTTCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: VAKRDRSESRRLSVSRLGTPAHT*MELHLL
Trigger: GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGT...ACCCAGTCTGGAGACCGAAAGTCTCCTGCTTTCACTGCGGTCCCGCTTAGCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR GCA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCAGGCTATCTTCCTGCTaGTCTCCCTGGGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSRLSSC*SPWASA
Trigger: TGCAGAGGCCCAGGGAGAGCAGCAGGAAGATAGCCT...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356896.8
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTTCCAGGCTATCTTCCTaGTGCTCTCCCTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TETLSAHTPAHTCMELHLSRLSS*CSPWAS
Trigger: AGAGGCCCAGGGAGAGCAGCAGGAAGATAGCCTGGA...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356896.8
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp ACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGCCTCCCCCGGCGAAGTaGTCGCCTCCCAGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: TTGMEERSHIHIPDTWTRPPPAK*SPPSES
Trigger: GGACTCACTGGGAGGCGACCACTTCGCCGGGGGAGG...CCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCGCCCTTGCACCAGAGTaGGCTCCAGTCCCGGCCCGA +
Preference number: 4 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLALAPE*APVPAR
Trigger: TCGGGCCGGGACTGGAGCCCACTCTGGTGCAAGGGC...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTACACGGTCTTGCAGCTaGATCCGCACCGTGTACTCC +
Preference number: 4 (lower is better)
Translates to: TETLSAHTPAHTCMELHLTRSCS*IRTVYS
Trigger: GGAGTACACGGTGCGGATCCAGCTGCAAGACCGTGT...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCTCCTGGGCTTCCTCCTaGAGCTCATTTACACGGTCT +
Preference number: 4 (lower is better)
Translates to: AEAMRSLQLHSIPLQCLGSWASS*SSFTRS
Trigger: AGACCGTGTAAATGAGCTCCAGGAGGAAGCCCAGGA...GCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGCTTTCTCCTGGATCTTaGTGTCCAGCTCCGACAGGT +
Preference number: 4 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWLSPGS*CPAPTG
Trigger: ACCTGTCGGAGCTGGACACCAAGATCCAGGAGAAAG...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGCCTCTGCAGCTGCCATaGCATAGCCTGAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWPLQLP*HSLRNP
Trigger: AGGATTTCTCAGGCTATGCCATGGCAGCTGCAGAGG...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCCAACTGTGGTGGAAATaGCCCCAGAATGGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: HSLLYRGIVNRISPASPGQLWWK*PQNGRA
Trigger: GGCCCTACCATTCTGGGGCCATTTCCACCACAGTTG...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCGGAGAGCCCCAACTGTaGTGGAAATGGCCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: HSLLYRGIVNRISPASPGGEPQL*WKWPQN
Trigger: ATTCTGGGGCCATTTCCACCACAGTTGGGGCTCTCC...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGCAGTTAGCACCAGTGTaGAAGACAGTGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWQLAPV*KTVSWL
Trigger: GAGCCAGCTCACTGTCTTCCACACTGGTGCTAACTG...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTGACAGCGTGAGCACGTaGACCATAGCAGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: TETLSAHTPAHTCMELHLDSVST*TIAGTR
Trigger: CCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCACATACACTCCACCTaGCAGGTGGACAGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: RDPERTYTRAHMHGASPSHIHST*QVDSVS
Trigger: GCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTG...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CACAGCCACATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTGGACCATACCGCGCACACATGCATaGAGCTTCACCTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: HSHIHSTWQVDSVSTWTIPRTHA*SFTFSV
Trigger: GACAGAGAAGGTGAAGCTCCATGCATGTGTGCGCGG...TATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTGGCTGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCCCGCGCACACATGCATaGAGCTTCACCTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: HSLLYRGIVNRISPASPGPRTHA*SFTFSV
Trigger: GACAGAGAAGGTGAAGCTCCATGCATGTGTGCGCGG...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CACAGCCACATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTGGACCATATGCCATGGCATAGCCTaGGAAATCCTCCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: HSHIHSTWQVDSVSTWTICHGIA*EILPKQ
Trigger: CTGCTTTGGGAGGATTTCTCAGGCTATGCCATGGCA...TATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCCCTTCTCCCGGGTTTTaGACAGGGACTCCGTATCTT +
Preference number: 4 (lower is better)
Translates to: HSLLYRGIVNRISPASPGPSPGF*TGTPYL
Trigger: AAGATACGGAGTCCCTGTTCAAAACCCGGGAGAAGG...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCTGGTCAATGGTCTCCTaGTACTCCTTCTCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLWSMVS*YSFSRV
Trigger: AACCCGGGAGAAGGAGTATCAGGAGACCATTGACCA...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCATGGAGCTGTCAGATaGGACATCGCGATCGGAGTC +
Preference number: 4 (lower is better)
Translates to: SPAACAAEAMRSLQLHSIHGAVR*DIAIGV
Trigger: GACTCCGATCGCGATGTCTCATCTGACAGCTCCATG...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCTGGAGAAGCCAAGACTaGGGGAGAAAGCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSWRSQD*GRKPEG
Trigger: TCCCTCAGGCTTTCTCCCTCAGTCTTGGCTTCTCCA...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAAAGCACATCTTTAGCTaGTACTTAAACAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPKHIFS*YLNRDP
Trigger: AGGGTCTCTGTTTAAGTATCAGCTAAAGATGTGCTT...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCGTTGGTCTCAGTGTATaGCAGACACGGAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: HSLLYRGIVNRISPASPGVGLSV*QTRRKH
Trigger: GTGCTTCCTCCGTGTCTGTCATACACTGAGACCAAC...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCTGTAAAGGGGCCCGGTaGGTACGGCAAATGAGAACT +
Preference number: 4 (lower is better)
Translates to: ETLSAHTPAHTCMELHLLCKGAR*VRQMRT
Trigger: AGTTCTCATTTGCCGTACTCACCGGGCCCCTTTACA...GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465801.5
CDS-3UTR GCA 90 bp ACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGGAAGCCGGTCTGCACTaGCTGGTCGCGACGACCCAG +
Preference number: 4 (lower is better)
Translates to: TTGMEERSHIHIPDTWTREAGLH*LVATTQ
Trigger: CTGGGTCGTCGCGACCAGGCAGTGCAGACCGGCTTC...CCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCACTGACGAAGCCGGTCTaGACTGCCTGGTCGCGACGA +
Preference number: 4 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSLTKPV*TAWSRR
Trigger: TCGTCGCGACCAGGCAGTGCAGACCGGCTTCGTCAG...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCTCATTTACACGGTCTTaGAGCTGGATCCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLSFTRS*SWIRTV
Trigger: CACGGTGCGGATCCAGCTGCAAGACCGTGTAAATGA...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CACAGCCACATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTGGACCATATCATTTACACGGTCTTaGAGCTGGATCCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: HSHIHSTWQVDSVSTWTISFTRS*SWIRTV
Trigger: CACGGTGCGGATCCAGCTGCAAGACCGTGTAAATGA...TATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCATCCAGGCTATCTTCCTaGTCTCCCTGGGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSSRLSS*SPWASA
Trigger: TGCAGAGGCCCAGGGAGAGCAGGAAGATAGCCTGGA...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336604.8
ENST00000396840.6
ENST00000465801.5
CDS-3UTR GCA 90 bp GAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCTCTATTCCACTCCAGTaGCTGGGCCAGTTAGCACCA +
Preference number: 4 (lower is better)
Translates to: ETLSAHTPAHTCMELHLLSIPLQ*LGQLAP
Trigger: TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGA...GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAAGAAGCCCTCTCCAGCTaGGTGTGCTGCAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQEALSS*VCCRGH
Trigger: ATGGCCTCTGCAGCACACGCAGCTGGAGAGGGCTTC...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCCCTTCAAAACACTGTaGCCATCCCGGGCACTAAGG +
Preference number: 4 (lower is better)
Translates to: TETLSAHTPAHTCMELHLPFKTL*PSRALR
Trigger: CCTTAGTGCCCGGGATGGGCACAGTGTTTTGAAGGG...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTTAGCACCACCCTTCAAAACACTGTaGCCATCCCGGGCACTAAGG +
Preference number: 4 (lower is better)
Translates to: RSLQLHSIPLQCLGQLAPPFKTL*PSRALR
Trigger: CCTTAGTGCCCGGGATGGGCACAGTGTTTTGAAGGG...TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTACACCCGCGCACACATaGATGGAGCTTCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: TETLSAHTPAHTCMELHLTPAHT*MELHLL
Trigger: GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGT...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp AAGGGGGAGGCAGGTCTCTATCTCATGGAGCTGTCAGATGAGACATCGCGATCGAGGCTATCTTCCTGCTaGTCTCCCTGGGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: KGEAGLYLMELSDETSRSRLSSC*SPWASA
Trigger: TGCAGAGGCCCAGGGAGAGCAGCAGGAAGATAGCCT...CGATCGCGATGTCTCATCTGACAGCTCCATGAGATAGAGACCTGCCTCCCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR GCA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCATCCAGGCTATCTTCCTaGTGCTCTCCCTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSSRLSS*CSPWAS
Trigger: AGAGGCCCAGGGAGAGCAGCAGGAAGATAGCCTGGA...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356896.8
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CACAGCCACATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTGGACCATATCGAGCCCGCTGCCCTaGCTCTTGTGGTATCATTTA +
Preference number: 4 (lower is better)
Translates to: HSHIHSTWQVDSVSTWTISSPLP*LLWYHL
Trigger: TAAATGATACCACAAGAGGCAGGGCAGCGGGCTCGA...TATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465801.5
ENST00000487279.6
CDS-3UTR GCA 90 bp TGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGTTAATGGGAGACAAGTaGAGAGACAGCTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: WPQNGRAKPSSRHPRALELMGDK*RDSFFW
Trigger: CCAGAAGAAGCTGTCTCTGCACTTGTCTCCCATTAA...CTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619571.5
CDS-3UTR CCA 90 bp GAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCCGAATAACGGATTCATaGCTGCGCCTTCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ETLSAHTPAHTCMELHLLRITDS*LRLLLG
Trigger: TCCCAGCAGAAGGCGCAGCCATGAATCCGTTATTCG...GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
CDS-3UTR CCA 90 bp GAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCTCCTGGGCTTCCTCCTaGAGCTCATTTACACGGTCT +
Preference number: 4 (lower is better)
Translates to: ETLSAHTPAHTCMELHLLSWASS*SSFTRS
Trigger: AGACCGTGTAAATGAGCTCCAGGAGGAAGCCCAGGA...GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCCTTTCTCCTGGATCTTaGTGTCCAGCTCCGACAGGT +
Preference number: 4 (lower is better)
Translates to: HSLLYRGIVNRISPASPGLSPGS*CPAPTG
Trigger: ACCTGTCGGAGCTGGACACCAAGATCCAGGAGAAAG...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CACAGCCACATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTGGACCATATCATACTCCCTCAGCTaGTTGAGCATGCGCTGCATC +
Preference number: 4 (lower is better)
Translates to: HSHIHSTWQVDSVSTWTISYSLS*LSMRCI
Trigger: GATGCAGCGCATGCTCAACCAGCTGAGGGAGTATGA...TATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCCCTCTGCAGCTGCCATaGCATAGCCTGAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: ETLSAHTPAHTCMELHLLPLQLP*HSLRNP
Trigger: AGGATTTCTCAGGCTATGCCATGGCAGCTGCAGAGG...GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCTGTCGTTCTTGGCCGTaGCCAACTCCAGCTCTATCT +
Preference number: 4 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLCRSWP*PTPALS
Trigger: AGATAGAGCTGGAGTTGGCCACGGCCAAGAACGACA...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCGAGCCCCAACTGTGGTaGAAATGGCCCCAGAATGGT +
Preference number: 4 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSEPQLW*KWPQNG
Trigger: ACCATTCTGGGGCCATTTCCACCACAGTTGGGGCTC...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTTAGCACCAGAGCCCCAACTGTGGTaGAAATGGCCCCAGAATGGT +
Preference number: 4 (lower is better)
Translates to: RSLQLHSIPLQCLGQLAPEPQLW*KWPQNG
Trigger: ACCATTCTGGGGCCATTTCCACCACAGTTGGGGCTC...TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTGAGCCCCAACTGTGGTaGAAATGGCCCCAGAATGGT +
Preference number: 4 (lower is better)
Translates to: RDPERTYTRAHMHGASPSEPQLW*KWPQNG
Trigger: ACCATTCTGGGGCCATTTCCACCACAGTTGGGGCTC...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCTCCGGACAACAGGGATaGAGGAAAGGTCCCACATTC +
Preference number: 4 (lower is better)
Translates to: ETLSAHTPAHTCMELHLLSGQQG*RKGPTF
Trigger: GAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGA...GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTTGGAAGACAGTGAGCTaGCTCCGGACAACAGGGATG +
Preference number: 4 (lower is better)
Translates to: SPAACAAEAMRSLQLHSIWKTVS*LRTTGM
Trigger: CATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTCCA...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTGTCCTTAGGGGAACTTaGGTAGGGGCAAGGCGTGTA +
Preference number: 4 (lower is better)
Translates to: SPAACAAEAMRSLQLHSIVLRGT*VGARRV
Trigger: TACACGCCTTGCCCCTACCCAAGTTCCCCTAAGGAC...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465801.5
CDS-3UTR TCA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCAGATGGTGCCGGGCATaGAGCGGGCCGACGAGGAAT +
Preference number: 4 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLRWCRA*SGPTRN
Trigger: ATTCCTCGTCGGCCCGCTTCATGCCCGGCACCATCT...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCATCGCAGTTGCGCTGCTaGGCCACATCGCAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSSQLRC*ATSQSL
Trigger: CAAGCTCTGCGATGTGGCTCAGCAGCGCAACTGCGA...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTTGCCATGGCATAGCCTaGGAAATCCTCCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: SPAACAAEAMRSLQLHSICHGIA*EILPKQ
Trigger: CTGCTTTGGGAGGATTTCTCAGGCTATGCCATGGCA...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAACAGTGTGGAAGACAGTaGGCTGGCTCCGGACAACAG +
Preference number: 4 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQQCGRQ*AGSGQQ
Trigger: CTGTTGTCCGGAGCCAGCTCACTGTCTTCCACACTG...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTTCTGTCATTCTGCAGTaGCCAGGAGAGCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SPAACAAEAMRSLQLHSISVILQ*PGEQEL
Trigger: GAGCTCTTGCTCTCCTGGTCACTGCAGAATGACAGA...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAACTTAAACAGAGACCCTaGGCGCACATACACCCGCGC +
Preference number: 4 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQLKQRP*AHIHPR
Trigger: GCGCGGGTGTATGTGCGCTCAGGGTCTCTGTTTAAG...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTTATACCGAGGCATTGTaGACCGCATCTCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TETLSAHTPAHTCMELHLYTEAL*TASPQL
Trigger: AAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATA...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAATTAAAGAATCCATTTaGATGTCAGCTCAACACAGC +
Preference number: 4 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPIKESI*MSAQHS
Trigger: GCTGTGTTGAGCTGACATTCAAATGGATTCTTTAAT...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCGGCGCTCCAGCTCATaGACCTTGGCCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLRRSSS*TLARKQ
Trigger: CTGCTTCCTGGCCAAGGTGCATGAGCTGGAGCGCCG...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCTGACGAAGCCGGTCTaGACTGCCTGGTCGCGACGA +
Preference number: 4 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLLTKPV*TAWSRR
Trigger: TCGTCGCGACCAGGCAGTGCAGACCGGCTTCGTCAG...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTTCTATTCCACTCCAGTaGCTGGGCCAGTTAGCACCA +
Preference number: 4 (lower is better)
Translates to: SPAACAAEAMRSLQLHSISIPLQ*LGQLAP
Trigger: TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGA...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCTGCGTAGCCTCCAGCTaGATTCTATTCCACTCCAGT +
Preference number: 4 (lower is better)
Translates to: HSLLYRGIVNRISPASPGCVASS*ILFHSS
Trigger: ACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCA...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCTGCGTAGCCTCCAGCTaGATTCTATTCCACTCCAGT +
Preference number: 4 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLCVASS*ILFHSS
Trigger: ACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCA...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTTCGAGCCCGCTGCCCTaGCTCTTGTGGTATCATTTA +
Preference number: 4 (lower is better)
Translates to: SPAACAAEAMRSLQLHSISSPLP*LLWYHL
Trigger: TAAATGATACCACAAGAGGCAGGGCAGCGGGCTCGA...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465801.5
ENST00000487279.6
CDS-3UTR CCA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCGAATAACGGATTCATaGCTGCGCCTTCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TETLSAHTPAHTCMELHLRITDS*LRLLLG
Trigger: TCCCAGCAGAAGGCGCAGCCATGAATCCGTTATTCG...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
CDS-3UTR CCA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTGCAGGAGGAAGAGGTTaGGGCCGAATAACGGATTCA +
Preference number: 4 (lower is better)
Translates to: RDPERTYTRAHMHGASPSAGGRG*GRITDS
Trigger: TGAATCCGTTATTCGGCCCCAACCTCTTCCTCCTGC...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCTCCTGGGCTTCCTCCTaGAGCTCATTTACACGGTCT +
Preference number: 4 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSSWASS*SSFTRS
Trigger: AGACCGTGTAAATGAGCTCCAGGAGGAAGCCCAGGA...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGTTCTTCTGGAACATCTaGATCATGTCCTCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: VPIPGTKASLKHGTSTREFFWNI*IMSSQL
Trigger: CAACTGCGAGGACATGATCCAGATGTTCCAGAAGAA...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000465801.5
ENST00000619571.5
CDS-3UTR CCA 90 bp ATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGGCCACTTCTTCTGGAACATCTaGATCATGTCCTCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: IPGTKASLKHGTSTREGHFFWNI*IMSSQL
Trigger: CAACTGCGAGGACATGATCCAGATGTTCCAGAAGAA...GTGGCCCTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000465801.5
ENST00000619571.5
CDS-3UTR CCA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTTCATACTCCCTCAGCTaGTTGAGCATGCGCTGCATC +
Preference number: 4 (lower is better)
Translates to: SPAACAAEAMRSLQLHSISYSLS*LSMRCI
Trigger: GATGCAGCGCATGCTCAACCAGCTGAGGGAGTATGA...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTTCATACTCCCTCAGCTaGTTGAGCATGCGCTGCATC +
Preference number: 4 (lower is better)
Translates to: RDPERTYTRAHMHGASPSSYSLS*LSMRCI
Trigger: GATGCAGCGCATGCTCAACCAGCTGAGGGAGTATGA...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTTGTCGTTCTTGGCCGTaGCCAACTCCAGCTCTATCT +
Preference number: 4 (lower is better)
Translates to: TETLSAHTPAHTCMELHLCRSWP*PTPALS
Trigger: AGATAGAGCTGGAGTTGGCCACGGCCAAGAACGACA...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTTGTCGTTCTTGGCCGTaGCCAACTCCAGCTCTATCT +
Preference number: 4 (lower is better)
Translates to: SPAACAAEAMRSLQLHSICRSWP*PTPALS
Trigger: AGATAGAGCTGGAGTTGGCCACGGCCAAGAACGACA...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCAGGTTCATGTCGTTCTTaGCCGTGGCCAACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSGSCRS*PWPTPA
Trigger: AGCTGGAGTTGGCCACGGCCAAGAACGACATGAACC...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCATTTCGGTCTCCAGACTaGGTGATGAGCCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSFRSPD*VMSRRQ
Trigger: CTGCCGCCGGCTCATCACCCAGTCTGGAGACCGAAA...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCAGGAGAGCCCCAACTGTaGTGGAAATGGCCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSGEPQL*WKWPQN
Trigger: ATTCTGGGGCCATTTCCACCACAGTTGGGGCTCTCC...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTGGGCCGCAATCGCTCTaGCAGCATTTTAAAGATGGG +
Preference number: 4 (lower is better)
Translates to: TETLSAHTPAHTCMELHLGPQSL*QHFKDG
Trigger: CCCATCTTTAAAATGCTGCCAGAGCGATTGCGGCCC...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCATGGAAGACAGTGAGCTaGCTCCGGACAACAGGGATG +
Preference number: 4 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSWKTVS*LRTTGM
Trigger: CATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTCCA...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCGACACTGTAGCCTGTTaGTCTCAGTGTATGACAGAC +
Preference number: 4 (lower is better)
Translates to: AEAMRSLQLHSIPLQCLGDTVAC*SQCMTD
Trigger: GTCTGTCATACACTGAGACCAACAGGCTACAGTGTC...GCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCAACTCCCTCAGCTGGTTaGGCATGCGCTGCATCTCCT +
Preference number: 4 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSTPSAG*ACAASP
Trigger: AGGAGATGCAGCGCATGCTCAACCAGCTGAGGGAGT...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCACCTTCTCCCGGGTTTTaGACAGGGACTCCGTATCTT +
Preference number: 4 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSPSPGF*TGTPYL
Trigger: AAGATACGGAGTCCCTGTTCAAAACCCGGGAGAAGG...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCATGGTCAATGGTCTCCTaGTACTCCTTCTCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSWSMVS*YSFSRV
Trigger: AACCCGGGAGAAGGAGTATCAGGAGACCATTGACCA...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCGTGCAGAGCTGCAGCTaGTGTTCCCCTCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLVQSCS*CSPLCS
Trigger: GCTGCACAGAGGGGAACATCAGCTGCAGCTCTGCAC...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACATTCACATTCCTaGTACGTGGACAAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SPAACAAEAMRSLQLHSIPHSHS*YVDKVR
Trigger: CCTCACCTTGTCCACGTATCAGGAATGTGAATGTGG...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCCACATTCACATTCCTaGTACGTGGACAAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TETLSAHTPAHTCMELHLPHSHS*YVDKVR
Trigger: CCTCACCTTGTCCACGTATCAGGAATGTGAATGTGG...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTTAGCACCACCACATTCACATTCCTaGTACGTGGACAAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: RSLQLHSIPLQCLGQLAPPHSHS*YVDKVR
Trigger: CCTCACCTTGTCCACGTATCAGGAATGTGAATGTGG...TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp TCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAGTGTGGAAGACAGTaGGCTGGCTCCGGACAACAG +
Preference number: 4 (lower is better)
Translates to: SGQQGWRKGPTFTFLIRGQCGRQ*AGSGQQ
Trigger: CTGTTGTCCGGAGCCAGCTCACTGTCTTCCACACTG...TCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCATCTGTCATTCTGCAGTaGCCAGGAGAGCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSSVILQ*PGEQEL
Trigger: GAGCTCTTGCTCTCCTGGTCACTGCAGAATGACAGA...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp TCGTCCTCAAAATCATACTCCCTCAGCTGGTTGAGCATGCGCTGCATCTCCTCGAGCGCTTGCTGCAGTTaGTTCTCCAACAGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: SSSKSYSLSWLSMRCISSSACCS*FSNSRF
Trigger: GAACCGGCTGTTGGAGAAGCAACTGCAGCAAGCGCT...CGAGGAGATGCAGCGCATGCTCAACCAGCTGAGGGAGTATGATTTTGAGGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR GCA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCATCATGTCCTCGCAGTTaGGCTGCTGAGCCACATCGC +
Preference number: 4 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSSCPRS*AAEPHR
Trigger: GCGATGTGGCTCAGCAGCGCAACTGCGAGGACATGA...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp AAGGGGGAGGCAGGTCTCTATCTCATGGAGCTGTCAGATGAGACATCGCGATCGTGGTTGAGCATGCGCTaGATCTCCTCGTTGATGCTG +
Preference number: 4 (lower is better)
Translates to: KGEAGLYLMELSDETSRSWLSMR*ISSLML
Trigger: CAGCATCAACGAGGAGATGCAGCGCATGCTCAACCA...CGATCGCGATGTCTCATCTGACAGCTCCATGAGATAGAGACCTGCCTCCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR GCA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCAGGGACCGGCCTGGTaGAGAGCTGCAGCTGATGTT +
Preference number: 4 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLQGPAW*RAAADV
Trigger: AACATCAGCTGCAGCTCTGCACCAGGCCGGTCCCTG...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCGAAGCCCTCTCCAGCTaGGTGTGCTGCAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLEALSS*VCCRGH
Trigger: ATGGCCTCTGCAGCACACGCAGCTGGAGAGGGCTTC...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCAACACGGTCTTGCAGCTaGATCCGCACCGTGTACTCC +
Preference number: 4 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSTRSCS*IRTVYS
Trigger: GGAGTACACGGTGCGGATCCAGCTGCAAGACCGTGT...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGATGGGGAAGTAGCAGACACCCACGCGTGAAGGCAGGAGAGCCCCAACTGTGGTTCTTCTGGAACATCTaGATCATGTCCTCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: RWGSSRHPRVKAGEPQLWFFWNI*IMSSQL
Trigger: CAACTGCGAGGACATGATCCAGATGTTCCAGAAGAA...CCACAGTTGGGGCTCTCCTGCCTTCACGCGTGGGTGTCTGCTACTTCCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000465801.5
ENST00000619571.5
CDS-3UTR CCA 90 bp TGGAGCTCATTTACACGGTCTTGCAGCTGGATCCGCACCGTGTACTCCTCTTCCCCTCTGCAGCTGCCATaGCATAGCCTGAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: WSSFTRSCSWIRTVYSSSPLQLP*HSLRNP
Trigger: AGGATTTCTCAGGCTATGCCATGGCAGCTGCAGAGG...GGAAGAGGAGTACACGGTGCGGATCCAGCTGCAAGACCGTGTAAATGAGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR CCA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAAGGAGAGCCCCAACTGTaGTGGAAATGGCCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQGEPQL*WKWPQN
Trigger: ATTCTGGGGCCATTTCCACCACAGTTGGGGCTCTCC...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAACCGCGCACACATGCATaGAGCTTCACCTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQPRTHA*SFTFSV
Trigger: GACAGAGAAGGTGAAGCTCCATGCATGTGTGCGCGG...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCGACACTGTAGCCTGTTaGTCTCAGTGTATGACAGAC +
Preference number: 4 (lower is better)
Translates to: HSLLYRGIVNRISPASPGDTVAC*SQCMTD
Trigger: GTCTGTCATACACTGAGACCAACAGGCTACAGTGTC...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAACCTTCTCCCGGGTTTTaGACAGGGACTCCGTATCTT +
Preference number: 4 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQPSPGF*TGTPYL
Trigger: AAGATACGGAGTCCCTGTTCAAAACCCGGGAGAAGG...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCACATGGAGCTGTCAGATaGGACATCGCGATCGGAGTC +
Preference number: 4 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSHGAVR*DIAIGV
Trigger: GACTCCGATCGCGATGTCTCATCTGACAGCTCCATG...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTGGTGGGTGTATCACCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSGGCIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGTGATACACCCACC...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465801.5
CDS-3UTR GCA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAATCATTTACACGGTCTTaGAGCTGGATCCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQSFTRS*SWIRTV
Trigger: CACGGTGCGGATCCAGCTGCAAGACCGTGTAAATGA...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp ACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTCATGTCCTCGCAGTTaGGCTGCTGAGCCACATCGC +
Preference number: 4 (lower is better)
Translates to: TTGMEERSHIHIPDTWTRSCPRS*AAEPHR
Trigger: GCGATGTGGCTCAGCAGCGCAACTGCGAGGACATGA...CCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTAATAGGTGGTGGAGGTaGAGGTGGAGGACGACGAGA +
Preference number: 4 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSNRWWR*RWRTTR
Trigger: TCTCGTCGTCCTCCACCTCCACCTCCACCACCTATT...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCAAATAGGTGGTGGAGGTaGAGGTGGAGGACGACGAGA +
Preference number: 4 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSNRWWR*RWRTTR
Trigger: TCTCGTCGTCCTCCACCTCCACCTCCACCACCTATT...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCACACGGTCTTGCAGCTaGATCCGCACCGTGTACTCC +
Preference number: 4 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLTRSCS*IRTVYS
Trigger: GGAGTACACGGTGCGGATCCAGCTGCAAGACCGTGT...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAATCCTGGGCTTCCTCCTaGAGCTCATTTACACGGTCT +
Preference number: 4 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQSWASS*SSFTRS
Trigger: AGACCGTGTAAATGAGCTCCAGGAGGAAGCCCAGGA...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAATGTCGTTCTTGGCCGTaGCCAACTCCAGCTCTATCT +
Preference number: 4 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQCRSWP*PTPALS
Trigger: AGATAGAGCTGGAGTTGGCCACGGCCAAGAACGACA...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCAGGTTCATGTCGTTCTTaGCCGTGGCCAACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSGSCRS*PWPTPA
Trigger: AGCTGGAGTTGGCCACGGCCAAGAACGACATGAACC...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAATCCGGACAACAGGGATaGAGGAAAGGTCCCACATTC +
Preference number: 4 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQSGQQG*RKGPTF
Trigger: GAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGA...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTTGGAAGACAGTGAGCTaGCTCCGGACAACAGGGATG +
Preference number: 4 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSWKTVS*LRTTGM
Trigger: CATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTCCA...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTGACACTGTAGCCTGTTaGTCTCAGTGTATGACAGAC +
Preference number: 4 (lower is better)
Translates to: RDPERTYTRAHMHGASPSDTVAC*SQCMTD
Trigger: GTCTGTCATACACTGAGACCAACAGGCTACAGTGTC...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp CGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTTAGCACCAGACACTGTAGCCTGTTaGTCTCAGTGTATGACAGAC +
Preference number: 4 (lower is better)
Translates to: RSLQLHSIPLQCLGQLAPDTVAC*SQCMTD
Trigger: GTCTGTCATACACTGAGACCAACAGGCTACAGTGTC...TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTGTTGGTCTCAGTGTATaGCAGACACGGAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSVGLSV*QTRRKH
Trigger: GTGCTTCCTCCGTGTCTGTCATACACTGAGACCAAC...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTTATACCGAGGCATTGTaGACCGCATCTCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSYTEAL*TASPQL
Trigger: AAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATA...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp ACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGAGCGCTTGCTGCAGTTaGTTCTCCAACAGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: TTGMEERSHIHIPDTWTRSACCS*FSNSRF
Trigger: GAACCGGCTGTTGGAGAAGCAACTGCAGCAAGCGCT...CCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCAGCGCTTGCTGCAGTTaGTTCTCCAACAGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLSACCS*FSNSRF
Trigger: GAACCGGCTGTTGGAGAAGCAACTGCAGCAAGCGCT...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTTCATTTACACGGTCTTaGAGCTGGATCCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSSFTRS*SWIRTV
Trigger: CACGGTGCGGATCCAGCTGCAAGACCGTGTAAATGA...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp ACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGACACCCGCGCACACATaGATGGAGCTTCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: TTGMEERSHIHIPDTWTRTPAHT*MELHLL
Trigger: GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGT...CCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTCGAATAACGGATTCATaGCTGCGCCTTCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSRITDS*LRLLLG
Trigger: TCCCAGCAGAAGGCGCAGCCATGAATCCGTTATTCG...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
CDS-3UTR CCA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCTGGAAGACAGTGAGCTaGCTCCGGACAACAGGGATG +
Preference number: 4 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLWKTVS*LRTTGM
Trigger: CATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTCCA...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCGCGCACACATGCATaGAGCTTCACCTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLPRTHA*SFTFSV
Trigger: GACAGAGAAGGTGAAGCTCCATGCATGTGTGCGCGG...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp ACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGGTCAATGGTCTCCTaGTACTCCTTCTCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: TTGMEERSHIHIPDTWTRWSMVS*YSFSRV
Trigger: AACCCGGGAGAAGGAGTATCAGGAGACCATTGACCA...CCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CACAGCCACATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTGGACCATAAAGCACATCTTTAGCTaGTACTTAAACAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: HSHIHSTWQVDSVSTWTIKHIFS*YLNRDP
Trigger: AGGGTCTCTGTTTAAGTATCAGCTAAAGATGTGCTT...TATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTGGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCAAGCACATCTTTAGCTaGTACTTAAACAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: ETLSAHTPAHTCMELHLLKHIFS*YLNRDP
Trigger: AGGGTCTCTGTTTAAGTATCAGCTAAAGATGTGCTT...GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCATTAAAGAATCCATTTaGATGTCAGCTCAACACAGC +
Preference number: 4 (lower is better)
Translates to: AEAMRSLQLHSIPLQCLGIKESI*MSAQHS
Trigger: GCTGTGTTGAGCTGACATTCAAATGGATTCTTTAAT...GCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR GCA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCATGCGTAGCCTCCAGCTaGATTCTATTCCACTCCAGT +
Preference number: 4 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSCVASS*ILFHSS
Trigger: ACTGGAGTGGAATAGAATGCAGCTGGAGGCTACGCA...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCTCATACTCCCTCAGCTaGTTGAGCATGCGCTGCATC +
Preference number: 4 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLSYSLS*LSMRCI
Trigger: GATGCAGCGCATGCTCAACCAGCTGAGGGAGTATGA...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp ACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGCCTCTGCAGCTGCCATaGCATAGCCTGAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: TTGMEERSHIHIPDTWTRPLQLP*HSLRNP
Trigger: AGGATTTCTCAGGCTATGCCATGGCAGCTGCAGAGG...CCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCTGTCGTTCTTGGCCGTaGCCAACTCCAGCTCTATCT +
Preference number: 4 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLCRSWP*PTPALS
Trigger: AGATAGAGCTGGAGTTGGCCACGGCCAAGAACGACA...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp ACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGGGGCCGCAATCGCTCTaGCAGCATTTTAAAGATGGG +
Preference number: 4 (lower is better)
Translates to: TTGMEERSHIHIPDTWTRGPQSL*QHFKDG
Trigger: CCCATCTTTAAAATGCTGCCAGAGCGATTGCGGCCC...CCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CCA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCTCCGGACAACAGGGATaGAGGAAAGGTCCCACATTC +
Preference number: 4 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLSGQQG*RKGPTF
Trigger: GAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGA...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
3UTR CAA 72 bp CCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTaGGTCTCAGTGTATGACAGACACGGAGGAAGCACA +
Preference number: 4 (lower is better)
Translates to: PGFSKNQGHCSL*VSVYDRHGGST
Trigger: TGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTAAGCACATCTTTAGCTaGTACTTAAACAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: TETLSAHTPAHTCMELHLKHIFS*YLNRDP
Trigger: AGGGTCTCTGTTTAAGTATCAGCTAAAGATGTGCTT...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCAATATTAGGAAGTGCTTaGGACAGTGACACCAAAGTG +
Preference number: 4 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSILGSA*DSDTKV
Trigger: CACTTTGGTGTCACTGTCTCAAGCACTTCCTAATAT...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465801.5
CDS-3UTR CCA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCAGACACTGTAGCCTGTTaGTCTCAGTGTATGACAGAC +
Preference number: 4 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSDTVAC*SQCMTD
Trigger: GTCTGTCATACACTGAGACCAACAGGCTACAGTGTC...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCAAAGCACATCTTTAGCTaGTACTTAAACAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSKHIFS*YLNRDP
Trigger: AGGGTCTCTGTTTAAGTATCAGCTAAAGATGTGCTT...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTATTAAAGAATCCATTTaGATGTCAGCTCAACACAGC +
Preference number: 4 (lower is better)
Translates to: RDPERTYTRAHMHGASPSIKESI*MSAQHS
Trigger: GCTGTGTTGAGCTGACATTCAAATGGATTCTTTAAT...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCATTAAAGAATCCATTTaGATGTCAGCTCAACACAGC +
Preference number: 4 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSIKESI*MSAQHS
Trigger: GCTGTGTTGAGCTGACATTCAAATGGATTCTTTAAT...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCAAAGCACATCTTTAGCTaGTACTTAAACAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSKHIFS*YLNRDP
Trigger: AGGGTCTCTGTTTAAGTATCAGCTAAAGATGTGCTT...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAAATTAAAGAATCCATTTaGATGTCAGCTCAACACAGC +
Preference number: 4 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQIKESI*MSAQHS
Trigger: GCTGTGTTGAGCTGACATTCAAATGGATTCTTTAAT...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR TCA 90 bp TCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGAATTAAAGAATCCATTTaGATGTCAGCTCAACACAGC +
Preference number: 4 (lower is better)
Translates to: SGQQGWRKGPTFTFLIRGIKESI*MSAQHS
Trigger: GCTGTGTTGAGCTGACATTCAAATGGATTCTTTAAT...TCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGCGACAAGCCAGGCCCTaGCACCAGAGTGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: SPTLCLAELPAARASGARRQARP*HQSGLQ
Trigger: CTGGAGCCCACTCTGGTGCAAGGGCCTGGCTTGTCG...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGTCTTCCCACCTCCGCTaGTACTCGTCCCGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: SPTLCLAELPAARASGARSSHLR*YSSRSR
Trigger: GCGGGAGCGGGACGAGTACAAGCGGAGGTGGGAAGA...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CTGGCAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGTCCTCGACGGCAGCCTaGCGCTCCCGCTTCCGCCCC +
Preference number: 5 (lower is better)
Translates to: LAGGQREHVDHSRDKVPRSSTAA*RSRFRP
Trigger: GGGGCGGAAGCGGGAGCGCAAGGCTGCCGTCGAGGA...CCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAATCCTCGACGGCAGCCTaGCGCTCCCGCTTCCGCCCC +
Preference number: 5 (lower is better)
Translates to: DSVSTWTIAGTRCPGQPQSSTAA*RSRFRP
Trigger: GGGGCGGAAGCGGGAGCGCAAGGCTGCCGTCGAGGA...TTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp TGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGAGTCCTCAGCCTCGCTaGGCGGCGGCGGCGGGTCGC +
Preference number: 5 (lower is better)
Translates to: WPQNGRAKPSSRHPRALESPQPR*AAAAGR
Trigger: GCGACCCGCCGCCGCCGCCAAGCGAGGCTGAGGACT...CTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS GCA 90 bp CGACCCAGGCCCCGCCGGCCCTGCTTACCCTCCTCCAGCGCTTGCTaGAGTTGCTTCTCCAACAGCCGGTTCCGGCGCTCCAGCTCATGC +
Preference number: 5 (lower is better)
Translates to: RPRPRRPCLPSSSAC*SCFSNSRFRRSSSC
Trigger: GCATGAGCTGGAGCGCCGGAACCGGCTGTTGGAGAAGCAACTGCAGCAAGCGCTGGAGGAGGGTAAGCAGGGCCGGCGGGGCCTGGGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000488007.5
ENST00000619571.5
CDS GCA 90 bp CGACGACCCAGGCCCCGCCGGCCCTGCTTACCCTCCTCCAGCGCTTaGTGCAGTTGCTTCTCCAACAGCCGGTTCCGGCGCTCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: RRPRPRRPCLPSSSA*CSCFSNSRFRRSSS
Trigger: TGAGCTGGAGCGCCGGAACCGGCTGTTGGAGAAGCAACTGCAGCAAGCGCTGGAGGAGGGTAAGCAGGGCCGGCGGGGCCTGGGTCGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000488007.5
ENST00000619571.5
CDS-3UTR CAA 90 bp TGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCTCTATCTCATGGAGCTGTCATCCTCGACGGCAGCCTaGCGCTCCCGCTTCCGCCCC +
Preference number: 5 (lower is better)
Translates to: CEGLGCKGEAGLYLMELSSSTAA*RSRFRP
Trigger: GGGGCGGAAGCGGGAGCGCAAGGCTGCCGTCGAGGA...TGACAGCTCCATGAGATAGAGACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS GCA 90 bp TGGTCGCCTCCCAGTGAGTCCCCCAGTGGCCCGGCCAGGCCCTGCTaGTCCTGCTGCAGGAGGAAGAGGTTGGGGCCGAATAACGGATTC +
Preference number: 5 (lower is better)
Translates to: WSPPSESPSGPARPC*SCCRRKRLGPNNGF
Trigger: GAATCCGTTATTCGGCCCCAACCTCTTCCTCCTGCAGCAGGAGCAGCAGGGCCTGGCCGGGCCACTGGGGGACTCACTGGGAGGCGACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000488007.5
ENST00000619571.5
CDS GCA 90 bp AAGTGGTCGCCTCCCAGTGAGTCCCCCAGTGGCCCGGCCAGGCCCTaGTGCTCCTGCTGCAGGAGGAAGAGGTTGGGGCCGAATAACGGA +
Preference number: 5 (lower is better)
Translates to: KWSPPSESPSGPARP*CSCCRRKRLGPNNG
Trigger: TCCGTTATTCGGCCCCAACCTCTTCCTCCTGCAGCAGGAGCAGCAGGGCCTGGCCGGGCCACTGGGGGACTCACTGGGAGGCGACCACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000488007.5
ENST00000619571.5
CDS GCA 90 bp AGGCCCCGCCGGCCCTGCTTACCCTCCTCCAGCGCTTGCTGCAGTTaGTTCTCCAACAGCCGGTTCCGGCGCTCCAGCTCATGCACCTTG +
Preference number: 5 (lower is better)
Translates to: RPRRPCLPSSSACCS*FSNSRFRRSSSCTL
Trigger: CAAGGTGCATGAGCTGGAGCGCCGGAACCGGCTGTTGGAGAAGCAACTGCAGCAAGCGCTGGAGGAGGGTAAGCAGGGCCGGCGGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000488007.5
ENST00000619571.5
CDS-3UTR CAA 90 bp CGGGCTCCCGCCTCCTGCCCGCACCAGAACAGAGCTCGTCGAGCCCGCTGCCCTAGGGTCTTGAGCACGTaGATGTTGGAGCCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: RAPASCPHQNRARRARCPRVLST*MLEPRS
Trigger: TGACCTGGGCTCCAACATCAACGTGCTCAAGACCCT...AGGGCAGCGGGCTCGACGAGCTCTGTTCTGGTGCGGGCAGGAGGCGGGAGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR CAA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAGCCACATCGCAGAGCTaGGCGGTGATGTCGATGCGG +
Preference number: 5 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPATSQS*AVMSMR
Trigger: CCGCATCGACATCACCGCCAAGCTCTGCGATGTGGC...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCAGTCCTCAGCCTCGCTaGGCGGCGGCGGCGGGTCGC +
Preference number: 5 (lower is better)
Translates to: HSLLYRGIVNRISPASPGSPQPR*AAAAGR
Trigger: GCGACCCGCCGCCGCCGCCAAGCGAGGCTGAGGACT...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCAGTCCTCAGCCTCGCTaGGCGGCGGCGGCGGGTCGC +
Preference number: 5 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLSPQPR*AAAAGR
Trigger: GCGACCCGCCGCCGCCGCCAAGCGAGGCTGAGGACT...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS CCA 90 bp CTGTGTGAATATGCTGGGCATGGGGCGGCTCGGGCCACTGCTCCCTaGCCAAACGGAAGCCCTGGAGGGCATGGCCAGTGCCTGGGACAT +
Preference number: 5 (lower is better)
Translates to: LCEYAGHGAARATAP*PNGSPGGHGQCLGH
Trigger: ATGTCCCAGGCACTGGCCATGCCCTCCAGGGCTTCCGTTTGGCCAGGGAGCAGTGGCCCGAGCCGCCCCATGCCCAGCATATTCACACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471408.5
CDS-3UTR CAA 90 bp TGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCAGGGTCTTGAGCACGTaGATGTTGGAGCCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: CLAELPAARASGARGRQVRVLST*MLEPRS
Trigger: TGACCTGGGCTCCAACATCAACGTGCTCAAGACCCT...GACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp AGCCCCACCCTCTGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGAGGGTCTTGAGCACGTaGATGTTGGAGCCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: SPTLCLAELPAARASGARRVLST*MLEPRS
Trigger: TGACCTGGGCTCCAACATCAACGTGCTCAAGACCCT...CCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCAGAGGGTGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp TGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCTCCAGCTCCGACAGGTaGTTACTCATGAGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: CLAELPAARASGARGRQVSSSDR*LLMSPL
Trigger: CAAGGGGCTCATGAGTAACAACCTGTCGGAGCTGGA...GACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CACAGCCACATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTGGACCATATCCTCGACGGCAGCCTaGCGCTCCCGCTTCCGCCCC +
Preference number: 5 (lower is better)
Translates to: HSHIHSTWQVDSVSTWTISSTAA*RSRFRP
Trigger: GGGGCGGAAGCGGGAGCGCAAGGCTGCCGTCGAGGA...TATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTGGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCGGTTCATGTCGTTCTaGGCCGTGGCCAACTCCAGC +
Preference number: 5 (lower is better)
Translates to: GGQREHVDHSRDKVPRPARFMSF*AVANSS
Trigger: GCTGGAGTTGGCCACGGCCAAGAACGACATGAACCG...GGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTAGTCCTCAGCCTCGCTaGGCGGCGGCGGCGGGTCGC +
Preference number: 5 (lower is better)
Translates to: SPAACAAEAMRSLQLHSISPQPR*AAAAGR
Trigger: GCGACCCGCCGCCGCCGCCAAGCGAGGCTGAGGACT...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp TGCCTCGCTGAGCTCCCTGCTGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCCCGCTGCCCTGCCTCTaGTGGTATCATTTAACCCTG +
Preference number: 5 (lower is better)
Translates to: CLAELPAARASGARGRQVPLPCL*WYHLTL
Trigger: CAGGGTTAAATGATACCACAAGAGGCAGGGCAGCGG...GACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCAGCAGGGAGCTCAGCGAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465801.5
ENST00000487279.6
CDS TCA 90 bp CCCACCACATTGCACCGGTGCCTCTTCTGTGGAGTCTCCCTGAGCTaGCTGCACCCCTCTTCCTGGGTAGCGGTGGCCTCCCCACAGCAC +
Preference number: 5 (lower is better)
Translates to: PTTLHRCLFCGVSLS*LHPSSWVAVASPQH
Trigger: GTGCTGTGGGGAGGCCACCGCTACCCAGGAAGAGGGGTGCAGTCAGCTCAGGGAGACTCCACAGAAGAGGCACCGGTGCAATGTGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471408.5
CDS-3UTR CAA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGCGACAAGCCAGGCCCTaGCACCAGAGTGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: VPIPGTKASLKHGTSTRERQARP*HQSGLQ
Trigger: CTGGAGCCCACTCTGGTGCAAGGGCCTGGCTTGTCG...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GGAAATGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTCTTCCCACCTCCGCTaGTACTCGTCCCGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: GNGPRMVGPSLAPDTPEPSSHLR*YSSRSR
Trigger: GCGGGAGCGGGACGAGTACAAGCGGAGGTGGGAAGA...GGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCATTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGAGCCACATCGCAGAGCTaGGCGGTGATGTCGATGCGG +
Preference number: 5 (lower is better)
Translates to: GPRMVGPSLAPDTPEPWRATSQS*AVMSMR
Trigger: CCGCATCGACATCACCGCCAAGCTCTGCGATGTGGC...TCTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCTACTCCCTCAGCTGGTaGAGCATGCGCTGCATCTCC +
Preference number: 5 (lower is better)
Translates to: GGQREHVDHSRDKVPRPAYSLSW*SMRCIS
Trigger: GGAGATGCAGCGCATGCTCAACCAGCTGAGGGAGTA...GGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAACGGTTCATGTCGTTCTaGGCCGTGGCCAACTCCAGC +
Preference number: 5 (lower is better)
Translates to: DSVSTWTIAGTRCPGQPQRFMSF*AVANSS
Trigger: GCTGGAGTTGGCCACGGCCAAGAACGACATGAACCG...TTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCGGTTCATGTCGTTCTaGGCCGTGGCCAACTCCAGC +
Preference number: 5 (lower is better)
Translates to: QVDSVSTWTIAGTRCPGQRFMSF*AVANSS
Trigger: GCTGGAGTTGGCCACGGCCAAGAACGACATGAACCG...CTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS GCA 90 bp CTGGCCAAACGGAAGCCCTGGAGGGCATGGCCAGTGCCTGGGACATaGAGGGGGCTCACTGGAACGACTAGCGGTCCTCATCCTCCTAGA +
Preference number: 5 (lower is better)
Translates to: LAKRKPWRAWPVPGT*RGLTGTTSGPHPPR
Trigger: TCTAGGAGGATGAGGACCGCTAGTCGTTCCAGTGAGCCCCCTGCATGTCCCAGGCACTGGCCATGCCCTCCAGGGCTTCCGTTTGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471408.5
CDS-3UTR CAA 90 bp GACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAAACCCTCCTCCAGCGCTaGCTGCAGTTGCTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: DSVSTWTIAGTRCPGQPQTLLQR*LQLLLQ
Trigger: TTGGAGAAGCAACTGCAGCAAGCGCTGGAGGAGGGT...TTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CACTCTCCGACAGGGAGGTGTCCTCCTCGACGGCAGCCTTGCGCTCCCGCTTCCCTCATTTACACGGTCTaGCAGCTGGATCCGCACCGT +
Preference number: 5 (lower is better)
Translates to: HSPTGRCPPRRQPCAPASLIYTV*QLDPHR
Trigger: ACGGTGCGGATCCAGCTGCAAGACCGTGTAAATGAG...GGAAGCGGGAGCGCAAGGCTGCCGTCGAGGAGGACACCTCCCTGTCGGAGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR CAA 90 bp GGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCATCCAGCTCCGACAGGTaGTTACTCATGAGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: GQREHVDHSRDKVPRPAPSSSDR*LLMSPL
Trigger: CAAGGGGCTCATGAGTAACAACCTGTCGGAGCTGGA...TGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp ATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGGCCACGCCACATCGCAGAGCTaGGCGGTGATGTCGATGCGG +
Preference number: 5 (lower is better)
Translates to: IPGTKASLKHGTSTREGHATSQS*AVMSMR
Trigger: CCGCATCGACATCACCGCCAAGCTCTGCGATGTGGC...GTGGCCCTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCATCCTCGACGGCAGCCTaGCGCTCCCGCTTCCGCCCC +
Preference number: 5 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSSSTAA*RSRFRP
Trigger: GGGGCGGAAGCGGGAGCGCAAGGCTGCCGTCGAGGA...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS TCA 90 bp GGTGTCCAGCTCCGACAGGTTCTGTCCAGGGAGCCCAGGGAACAGTaGGGAGGCGCCCAGTTCTCCAGACAAGGACGAATTAGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: GVQLRQVLSREPREQ*GGAQFSRQGRIRPG
Trigger: GCCAGGCCTAATTCGTCCTTGTCTGGAGAACTGGGCGCCTCCTCACTGTTCCCTGGGCTCCCTGGACAGAACCTGTCGGAGCTGGACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471408.5
CDS-3UTR CAA 90 bp CAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCGGAGGTTCAGGGTCTaGAGCACGTTGATGTTGGAG +
Preference number: 5 (lower is better)
Translates to: QVDSVSTWTIAGTRCPGQRRFRV*STLMLE
Trigger: CTCCAACATCAACGTGCTCAAGACCCTGAACCTCCG...CTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGACAGCGCTTGCTGCAGTaGCTTCTCCAACAGCCGGTT +
Preference number: 5 (lower is better)
Translates to: GPRMVGPSLAPDTPEPWRQRLLQ*LLQQPV
Trigger: AACCGGCTGTTGGAGAAGCAACTGCAGCAAGCGCTG...TCTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GTCGCTAAGCGGGACCGCAGTGAAAGCAGGAGACTTTCGGTCTCCAGACTGGGTCGACAAGCCAGGCCCTaGCACCAGAGTGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: VAKRDRSESRRLSVSRLGRQARP*HQSGLQ
Trigger: CTGGAGCCCACTCTGGTGCAAGGGCCTGGCTTGTCG...ACCCAGTCTGGAGACCGAAAGTCTCCTGCTTTCACTGCGGTCCCGCTTAGCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR CAA 90 bp GAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCCGACAAGCCAGGCCCTaGCACCAGAGTGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: ETLSAHTPAHTCMELHLLRQARP*HQSGLQ
Trigger: CTGGAGCCCACTCTGGTGCAAGGGCCTGGCTTGTCG...GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGCCCCAACTCATTTACACGGTCTaGCAGCTGGATCCGCACCGT +
Preference number: 5 (lower is better)
Translates to: DSVSTWTIAGTRCPGQPQLIYTV*QLDPHR
Trigger: ACGGTGCGGATCCAGCTGCAAGACCGTGTAAATGAG...TTGGGGCTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGCGCTGCATCTCCTCGTaGATGCTGAGGGCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: VPIPGTKASLKHGTSTRERCISS*MLRAVL
Trigger: GAGCACAGCCCTCAGCATCAACGAGGAGATGCAGCG...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTAGTCCTCAGCCTCGCTaGGCGGCGGCGGCGGGTCGC +
Preference number: 5 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSSPQPR*AAAAGR
Trigger: GCGACCCGCCGCCGCCGCCAAGCGAGGCTGAGGACT...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGACCCTCCTCCAGCGCTaGCTGCAGTTGCTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: VPIPGTKASLKHGTSTRETLLQR*LQLLLQ
Trigger: TTGGAGAAGCAACTGCAGCAAGCGCTGGAGGAGGGT...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp ATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGGCCACACCCTCCTCCAGCGCTaGCTGCAGTTGCTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: IPGTKASLKHGTSTREGHTLLQR*LQLLLQ
Trigger: TTGGAGAAGCAACTGCAGCAAGCGCTGGAGGAGGGT...GTGGCCCTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCGACAAGCCAGGCCCTaGCACCAGAGTGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: RDPERTYTRAHMHGASPSRQARP*HQSGLQ
Trigger: CTGGAGCCCACTCTGGTGCAAGGGCCTGGCTTGTCG...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTTCTTCCCACCTCCGCTaGTACTCGTCCCGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: TETLSAHTPAHTCMELHLSSHLR*YSSRSR
Trigger: GCGGGAGCGGGACGAGTACAAGCGGAGGTGGGAAGA...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000619571.5
CDS-3UTR CAA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTTCTTCCCACCTCCGCTaGTACTCGTCCCGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: RDPERTYTRAHMHGASPSSSHLR*YSSRSR
Trigger: GCGGGAGCGGGACGAGTACAAGCGGAGGTGGGAAGA...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000619571.5
CDS-3UTR CAA 90 bp TGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGGAGCTCATTTACACGGTCTaGCAGCTGGATCCGCACCGT +
Preference number: 5 (lower is better)
Translates to: WPQNGRAKPSSRHPRALELIYTV*QLDPHR
Trigger: ACGGTGCGGATCCAGCTGCAAGACCGTGTAAATGAG...CTCCAGGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGTACTCCCTCAGCTGGTaGAGCATGCGCTGCATCTCC +
Preference number: 5 (lower is better)
Translates to: VPIPGTKASLKHGTSTREYSLSW*SMRCIS
Trigger: GGAGATGCAGCGCATGCTCAACCAGCTGAGGGAGTA...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGCCAGTCCTTCTCCCGGGTTTaGAACAGGGACTCCGTATCT +
Preference number: 5 (lower is better)
Translates to: QVDSVSTWTIAGTRCPGQSFSRV*NRDSVS
Trigger: AGATACGGAGTCCCTGTTCAAAACCCGGGAGAAGGA...CTGGCCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CTGGCAGGTGGACAGCGTGAGCACGTGGACCATAGCAGGGACAAGGTGCCCCGGTCCTTCTCCCGGGTTTaGAACAGGGACTCCGTATCT +
Preference number: 5 (lower is better)
Translates to: LAGGQREHVDHSRDKVPRSFSRV*NRDSVS
Trigger: AGATACGGAGTCCCTGTTCAAAACCCGGGAGAAGGA...CCGGGGCACCTTGTCCCTGCTATGGTCCACGTGCTCACGCTGTCCACCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCAGTCCTCAGCCTCGCTaGGCGGCGGCGGCGGGTCGC +
Preference number: 5 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLSPQPR*AAAAGR
Trigger: GCGACCCGCCGCCGCCGCCAAGCGAGGCTGAGGACT...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS CCA 90 bp CAAGGTCCTCATCCTTCCCACCACATTGCACCGGTGCCTCTTCTGTaGAGTCTCCCTGAGCTGACTGCACCCCTCTTCCTGGGTAGCGGT +
Preference number: 5 (lower is better)
Translates to: QGPHPSHHIAPVPLL*SLPELTAPLFLGSG
Trigger: ACCGCTACCCAGGAAGAGGGGTGCAGTCAGCTCAGGGAGACTCCACAGAAGAGGCACCGGTGCAATGTGGTGGGAAGGATGAGGACCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471408.5
CDS-3UTR CAA 90 bp GGAAATGGCCCCAGAATGGTAGGGCCAAGCCTAGCTCCAGACACCCCAGAGCCCTGCAGGAGGAAGAGGTaGGGGCCGAATAACGGATTC +
Preference number: 5 (lower is better)
Translates to: GNGPRMVGPSLAPDTPEPCRRKR*GPNNGF
Trigger: GAATCCGTTATTCGGCCCCAACCTCTTCCTCCTGCA...GGGCTCTGGGGTGTCTGGAGCTAGGCTTGGCCCTACCATTCTGGGGCCATTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp ATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGGCCACTGCAGGAGGAAGAGGTaGGGGCCGAATAACGGATTC +
Preference number: 5 (lower is better)
Translates to: IPGTKASLKHGTSTREGHCRRKR*GPNNGF
Trigger: GAATCCGTTATTCGGCCCCAACCTCTTCCTCCTGCA...GTGGCCCTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGCGGAGGTTCAGGGTCTaGAGCACGTTGATGTTGGAG +
Preference number: 5 (lower is better)
Translates to: VPIPGTKASLKHGTSTRERRFRV*STLMLE
Trigger: CTCCAACATCAACGTGCTCAAGACCCTGAACCTCCG...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGCTCATTTACACGGTCTaGCAGCTGGATCCGCACCGT +
Preference number: 5 (lower is better)
Translates to: VPIPGTKASLKHGTSTRELIYTV*QLDPHR
Trigger: ACGGTGCGGATCCAGCTGCAAGACCGTGTAAATGAG...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CCCAGCTACAGGCATGCTGAAGCAGGAGAATCGCTTGCACCCCGGAGGCAGAGGTCCAGCTCCGACAGGTaGTTACTCATGAGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: PSYRHAEAGESLAPRRQRSSSDR*LLMSPL
Trigger: CAAGGGGCTCATGAGTAACAACCTGTCGGAGCTGGA...CCTCTGCCTCCGGGGTGCAAGCGATTCTCCTGCTTCAGCATGCCTGTAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465801.5
CDS-3UTR CAA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTGCCACATCGCAGAGCTaGGCGGTGATGTCGATGCGG +
Preference number: 5 (lower is better)
Translates to: RDPERTYTRAHMHGASPSATSQS*AVMSMR
Trigger: CCGCATCGACATCACCGCCAAGCTCTGCGATGTGGC...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTTAGCACCAGCCACATCGCAGAGCTaGGCGGTGATGTCGATGCGG +
Preference number: 5 (lower is better)
Translates to: RSLQLHSIPLQCLGQLAPATSQS*AVMSMR
Trigger: CCGCATCGACATCACCGCCAAGCTCTGCGATGTGGC...TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCTCCTCGACGGCAGCCTaGCGCTCCCGCTTCCGCCCC +
Preference number: 5 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLSSTAA*RSRFRP
Trigger: GGGGCGGAAGCGGGAGCGCAAGGCTGCCGTCGAGGA...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCCGGTTCATGTCGTTCTaGGCCGTGGCCAACTCCAGC +
Preference number: 5 (lower is better)
Translates to: ETLSAHTPAHTCMELHLLRFMSF*AVANSS
Trigger: GCTGGAGTTGGCCACGGCCAAGAACGACATGAACCG...GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCCGGTTCATGTCGTTCTaGGCCGTGGCCAACTCCAGC +
Preference number: 5 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLRFMSF*AVANSS
Trigger: GCTGGAGTTGGCCACGGCCAAGAACGACATGAACCG...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp TGCGAGGGCCTCGGGTGCAAGGGGGAGGCAGGTCTCTATCTCATGGAGCTGTCACCGCTGCCCTGCCTCTaGTGGTATCATTTAACCCTG +
Preference number: 5 (lower is better)
Translates to: CEGLGCKGEAGLYLMELSPLPCL*WYHLTL
Trigger: CAGGGTTAAATGATACCACAAGAGGCAGGGCAGCGG...TGACAGCTCCATGAGATAGAGACCTGCCTCCCCCTTGCACCCGAGGCCCTCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS TCA 90 bp AGCTTCTTCTGGAACATCTGGATCATGTCCTCGCAGTTGCGCTGCTaGGCCACATCGCAGAGCTTGGCGGTGATGTCGATGCGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: SFFWNIWIMSSQLRC*ATSQSLAVMSMRRQ
Trigger: CTGCCGCCGCATCGACATCACCGCCAAGCTCTGCGATGTGGCTCAGCAGCGCAACTGCGAGGACATGATCCAGATGTTCCAGAAGAAGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000465801.5
ENST00000619571.5
CDS TCA 90 bp AGAGGTGACCAGACTGGCTCAGAGGCCGGAAGTCCCACAGCAGCATaGCAGCAGTGGACACACGAGCCTGGGGTTACTAGCACTCAAACC +
Preference number: 5 (lower is better)
Translates to: RGDQTGSEAGSPTAA*QQWTHEPGVTSTQT
Trigger: GGTTTGAGTGCTAGTAACCCCAGGCTCGTGTGTCCACTGCTGTCATGCTGCTGTGGGACTTCCGGCCTCTGAGCCAGTCTGGTCACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465801.5
CDS-3UTR CAA 90 bp CACAGCCACATACACTCCACCTGGCAGGTGGACAGCGTGAGCACGTGGACCATACAGCGCTTGCTGCAGTaGCTTCTCCAACAGCCGGTT +
Preference number: 5 (lower is better)
Translates to: HSHIHSTWQVDSVSTWTIQRLLQ*LLQQPV
Trigger: AACCGGCTGTTGGAGAAGCAACTGCAGCAAGCGCTG...TATGGTCCACGTGCTCACGCTGTCCACCTGCCAGGTGGAGTGTATGTGGCTGTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCGCTGCATCTCCTCGTaGATGCTGAGGGCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: RDPERTYTRAHMHGASPSRCISS*MLRAVL
Trigger: GAGCACAGCCCTCAGCATCAACGAGGAGATGCAGCG...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTTAGCACCACGCTGCATCTCCTCGTaGATGCTGAGGGCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: RSLQLHSIPLQCLGQLAPRCISS*MLRAVL
Trigger: GAGCACAGCCCTCAGCATCAACGAGGAGATGCAGCG...TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCTACTCCCTCAGCTGGTaGAGCATGCGCTGCATCTCC +
Preference number: 5 (lower is better)
Translates to: HSLLYRGIVNRISPASPGYSLSW*SMRCIS
Trigger: GGAGATGCAGCGCATGCTCAACCAGCTGAGGGAGTA...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTCTACTCCCTCAGCTGGTaGAGCATGCGCTGCATCTCC +
Preference number: 5 (lower is better)
Translates to: ETLSAHTPAHTCMELHLLYSLSW*SMRCIS
Trigger: GGAGATGCAGCGCATGCTCAACCAGCTGAGGGAGTA...GAGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGTCCTTCTCCCGGGTTTaGAACAGGGACTCCGTATCT +
Preference number: 5 (lower is better)
Translates to: VPIPGTKASLKHGTSTRESFSRV*NRDSVS
Trigger: AGATACGGAGTCCCTGTTCAAAACCCGGGAGAAGGA...CTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTAACGGCTCAGTTGCTTaGGGCAGTTACTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: RDPERTYTRAHMHGASPSNGSVA*GSYSRA
Trigger: GGCCCGGGAGTAACTGCCCAAAGCAACTGAGCCGTT...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465801.5
CDS-3UTR CAA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCTTGAGCACGTTGATGTaGGAGCCCAGGTCATTGCGG +
Preference number: 5 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLLSTLM*EPRSLR
Trigger: CCGCAATGACCTGGGCTCCAACATCAACGTGCTCAA...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCAGGGTCTTGAGCACGTaGATGTTGGAGCCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLRVLST*MLEPRS
Trigger: TGACCTGGGCTCCAACATCAACGTGCTCAAGACCCT...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCCGGAGGTTCAGGGTCTaGAGCACGTTGATGTTGGAG +
Preference number: 5 (lower is better)
Translates to: HSLLYRGIVNRISPASPGRRFRV*STLMLE
Trigger: CTCCAACATCAACGTGCTCAAGACCCTGAACCTCCG...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTTAGCACCACAGCGCTTGCTGCAGTaGCTTCTCCAACAGCCGGTT +
Preference number: 5 (lower is better)
Translates to: RSLQLHSIPLQCLGQLAPQRLLQ*LLQQPV
Trigger: AACCGGCTGTTGGAGAAGCAACTGCAGCAAGCGCTG...TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp AGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTCTACCCTCCTCCAGCGCTaGCTGCAGTTGCTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: RDPERTYTRAHMHGASPSTLLQR*LQLLLQ
Trigger: TTGGAGAAGCAACTGCAGCAAGCGCTGGAGGAGGGT...AGAAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCCCCAGCTTCTCCAGGCTCCAGCTCCGACAGGTaGTTACTCATGAGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: HSLLYRGIVNRISPASPGSSSDR*LLMSPL
Trigger: CAAGGGGCTCATGAGTAACAACCTGTCGGAGCTGGA...GCCTGGAGAAGCTGGGGAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCTACTCCCTCAGCTGGTaGAGCATGCGCTGCATCTCC +
Preference number: 5 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSYSLSW*SMRCIS
Trigger: GGAGATGCAGCGCATGCTCAACCAGCTGAGGGAGTA...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp ATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCACGAGGGAGGGCCACGGACACTGTAGCCTGTaGGTCTCAGTGTATGACAGA +
Preference number: 5 (lower is better)
Translates to: IPGTKASLKHGTSTREGHGHCSL*VSVYDR
Trigger: TCTGTCATACACTGAGACCAACAGGCTACAGTGTCC...GTGGCCCTCCCTCGTGGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS TCA 90 bp CCTGTAAAAGCATCCAGAGCCTCCTCTAAGGGAGTCACAGAGAGGTaGCCAGACTGGCTCAGAGGCCGGAAGTCCCACAGCAGCATGACA +
Preference number: 5 (lower is better)
Translates to: PVKASRASSKGVTER*PDWLRGRKSHSSMT
Trigger: TGTCATGCTGCTGTGGGACTTCCGGCCTCTGAGCCAGTCTGGTCACCTCTCTGTGACTCCCTTAGAGGAGGCTCTGGATGCTTTTACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465801.5
CDS CCA 90 bp GACTCCGTATCTTTAATCACCTTCTCCAGGCTATCTTCCTGCTGCTaGAGTAGAAAGGGAAGCGGGGGAGGCCAGCCAAGGAGGGATGGG +
Preference number: 5 (lower is better)
Translates to: DSVSLITFSRLSSCC*SRKGSGGGQPRRDG
Trigger: CCCATCCCTCCTTGGCTGGCCTCCCCCGCTTCCCTTTCTACTCCAGCAGCAGGAAGATAGCCTGGAGAAGGTGATTAAAGATACGGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488007.5
CDS-3UTR CAA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTTGCAGGAGGAAGAGGTaGGGGCCGAATAACGGATTC +
Preference number: 5 (lower is better)
Translates to: TETLSAHTPAHTCMELHLCRRKR*GPNNGF
Trigger: GAATCCGTTATTCGGCCCCAACCTCTTCCTCCTGCA...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CAAAACACTGTGCCCATCCCGGGCACTAAGGCCTCTTTAAAGCACGGCACCTCCTTGAGCACGTTGATGTaGGAGCCCAGGTCATTGCGG +
Preference number: 5 (lower is better)
Translates to: QNTVPIPGTKASLKHGTSLSTLM*EPRSLR
Trigger: CCGCAATGACCTGGGCTCCAACATCAACGTGCTCAA...GGAGGTGCCGTGCTTTAAAGAGGCCTTAGTGCCCGGGATGGGCACAGTGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCGGAGGTTCAGGGTCTaGAGCACGTTGATGTTGGAG +
Preference number: 5 (lower is better)
Translates to: SPAACAAEAMRSLQLHSIRRFRV*STLMLE
Trigger: CTCCAACATCAACGTGCTCAAGACCCTGAACCTCCG...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCAACCCTCCTCCAGCGCTaGCTGCAGTTGCTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSTLLQR*LQLLLQ
Trigger: TTGGAGAAGCAACTGCAGCAAGCGCTGGAGGAGGGT...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CGTAGCCTCCAGCTGCATTCTATTCCACTCCAGTGCCTGGGCCAGTTAGCACCACTCATTTACACGGTCTaGCAGCTGGATCCGCACCGT +
Preference number: 5 (lower is better)
Translates to: RSLQLHSIPLQCLGQLAPLIYTV*QLDPHR
Trigger: ACGGTGCGGATCCAGCTGCAAGACCGTGTAAATGAG...TGGTGCTAACTGGCCCAGGCACTGGAGTGGAATAGAATGCAGCTGGAGGCTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp ACAGAGACCCTGAGCGCACATACACCCGCGCACACATGCATGGAGCTTCACCTTTCCAGCTCCGACAGGTaGTTACTCATGAGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: TETLSAHTPAHTCMELHLSSSDR*LLMSPL
Trigger: CAAGGGGCTCATGAGTAACAACCTGTCGGAGCTGGA...AAGGTGAAGCTCCATGCATGTGTGCGCGGGTGTATGTGCGCTCAGGGTCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCAGCCACATCGCAGAGCTaGGCGGTGATGTCGATGCGG +
Preference number: 5 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSATSQS*AVMSMR
Trigger: CCGCATCGACATCACCGCCAAGCTCTGCGATGTGGC...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp TCGTCCTCAAAATCATACTCCCTCAGCTGGTTGAGCATGCGCTGCATCTCCTCGCGCTGCATCTCCTCGTaGATGCTGAGGGCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: SSSKSYSLSWLSMRCISSRCISS*MLRAVL
Trigger: GAGCACAGCCCTCAGCATCAACGAGGAGATGCAGCG...CGAGGAGATGCAGCGCATGCTCAACCAGCTGAGGGAGTATGATTTTGAGGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR CAA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAACGGTTCATGTCGTTCTaGGCCGTGGCCAACTCCAGC +
Preference number: 5 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQRFMSF*AVANSS
Trigger: GCTGGAGTTGGCCACGGCCAAGAACGACATGAACCG...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS GCA 90 bp AGGGACTCCGTATCTTTAATCACCTTCTCCAGGCTATCTTCCTGCTaGTGGAGTAGAAAGGGAAGCGGGGGAGGCCAGCCAAGGAGGGAT +
Preference number: 5 (lower is better)
Translates to: RDSVSLITFSRLSSC*WSRKGSGGGQPRRD
Trigger: ATCCCTCCTTGGCTGGCCTCCCCCGCTTCCCTTTCTACTCCAGCAGCAGGAAGATAGCCTGGAGAAGGTGATTAAAGATACGGAGTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488007.5
CDS GCA 90 bp AACAGGGACTCCGTATCTTTAATCACCTTCTCCAGGCTATCTTCCTaGTGCTGGAGTAGAAAGGGAAGCGGGGGAGGCCAGCCAAGGAGG +
Preference number: 5 (lower is better)
Translates to: NRDSVSLITFSRLSS*CWSRKGSGGGQPRR
Trigger: CCTCCTTGGCTGGCCTCCCCCGCTTCCCTTTCTACTCCAGCAGCAGGAAGATAGCCTGGAGAAGGTGATTAAAGATACGGAGTCCCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488007.5
CDS-3UTR CAA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCATTGAGCACGTTGATGTaGGAGCCCAGGTCATTGCGG +
Preference number: 5 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSLSTLM*EPRSLR
Trigger: CCGCAATGACCTGGGCTCCAACATCAACGTGCTCAA...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp TGGAGCTCATTTACACGGTCTTGCAGCTGGATCCGCACCGTGTACTCCTCTTCCTTGAGCACGTTGATGTaGGAGCCCAGGTCATTGCGG +
Preference number: 5 (lower is better)
Translates to: WSSFTRSCSWIRTVYSSSLSTLM*EPRSLR
Trigger: CCGCAATGACCTGGGCTCCAACATCAACGTGCTCAA...GGAAGAGGAGTACACGGTGCGGATCCAGCTGCAAGACCGTGTAAATGAGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487279.6
CDS-3UTR CAA 90 bp GAAGACAGTGAGCTGGCTCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCACTCATTTACACGGTCTaGCAGCTGGATCCGCACCGT +
Preference number: 5 (lower is better)
Translates to: EDSELAPDNRDGGKVPHSLIYTV*QLDPHR
Trigger: ACGGTGCGGATCCAGCTGCAAGACCGTGTAAATGAG...TGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGAGCCAGCTCACTGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCACGCTGCATCTCCTCGTaGATGCTGAGGGCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSRCISS*MLRAVL
Trigger: GAGCACAGCCCTCAGCATCAACGAGGAGATGCAGCG...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTCGCTGCATCTCCTCGTaGATGCTGAGGGCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSRCISS*MLRAVL
Trigger: GAGCACAGCCCTCAGCATCAACGAGGAGATGCAGCG...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp TCTCCAGCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTTCCTTCTCCCGGGTTTaGAACAGGGACTCCGTATCT +
Preference number: 5 (lower is better)
Translates to: SPAACAAEAMRSLQLHSISFSRV*NRDSVS
Trigger: AGATACGGAGTCCCTGTTCAAAACCCGGGAGAAGGA...AATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGCTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GCTGCGTGTGCTGCAGAGGCCATGCGTAGCCTCCAGCTGCATTCTATTCCACTCGGACACTGTAGCCTGTaGGTCTCAGTGTATGACAGA +
Preference number: 5 (lower is better)
Translates to: AACAAEAMRSLQLHSIPLGHCSL*VSVYDR
Trigger: TCTGTCATACACTGAGACCAACAGGCTACAGTGTCC...GAGTGGAATAGAATGCAGCTGGAGGCTACGCATGGCCTCTGCAGCACACGCAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCACAGCGCTTGCTGCAGTaGCTTCTCCAACAGCCGGTT +
Preference number: 5 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSQRLLQ*LLQQPV
Trigger: AACCGGCTGTTGGAGAAGCAACTGCAGCAAGCGCTG...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp GGACACTGTAGCCTGTTGGTCTCAGTGTATGACAGACACGGAGGAAGCACATCTTACTCCCTCAGCTGGTaGAGCATGCGCTGCATCTCC +
Preference number: 5 (lower is better)
Translates to: GHCSLLVSVYDRHGGSTSYSLSW*SMRCIS
Trigger: GGAGATGCAGCGCATGCTCAACCAGCTGAGGGAGTA...AGATGTGCTTCCTCCGTGTCTGTCATACACTGAGACCAACAGGCTACAGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp CCAGCTTCTCCAGGCTTTTCCAAGAATCAGGGACACTGTAGCCTGTTGGTCTCATGCAGGAGGAAGAGGTaGGGGCCGAATAACGGATTC +
Preference number: 5 (lower is better)
Translates to: PASPGFSKNQGHCSLLVSCRRKR*GPNNGF
Trigger: GAATCCGTTATTCGGCCCCAACCTCTTCCTCCTGCA...TGAGACCAACAGGCTACAGTGTCCCTGATTCTTGGAAAAGCCTGGAGAAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp TCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGATGCAGGAGGAAGAGGTaGGGGCCGAATAACGGATTC +
Preference number: 5 (lower is better)
Translates to: SGQQGWRKGPTFTFLIRGCRRKR*GPNNGF
Trigger: GAATCCGTTATTCGGCCCCAACCTCTTCCTCCTGCA...TCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp TCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGAAGGGTCTTGAGCACGTaGATGTTGGAGCCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: SGQQGWRKGPTFTFLIRGRVLST*MLEPRS
Trigger: TGACCTGGGCTCCAACATCAACGTGCTCAAGACCCT...TCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp TCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGATCCAGCTCCGACAGGTaGTTACTCATGAGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: SGQQGWRKGPTFTFLIRGSSSDR*LLMSPL
Trigger: CAAGGGGCTCATGAGTAACAACCTGTCGGAGCTGGA...TCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS TCA 90 bp CAAACCCAGAGGGAAAGAGAAAGTAGAGTATGTAAAGGGGCCCGGTaGGTACGGCAAATGAGAACTAGACACAGCCTGTTCCAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: QTQRERESRVCKGAR*VRQMRTRHSLFQGP
Trigger: TGGGCCCTGGAACAGGCTGTGTCTAGTTCTCATTTGCCGTACTCACCGGGCCCCTTTACATACTCTACTTTCTCTTTCCCTCTGGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465801.5
CDS-3UTR CAA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCTTGAGCACGTTGATGTaGGAGCCCAGGTCATTGCGG +
Preference number: 5 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLLSTLM*EPRSLR
Trigger: CCGCAATGACCTGGGCTCCAACATCAACGTGCTCAA...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp TCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGATCCTTCTCCCGGGTTTaGAACAGGGACTCCGTATCT +
Preference number: 5 (lower is better)
Translates to: SGQQGWRKGPTFTFLIRGSFSRV*NRDSVS
Trigger: AGATACGGAGTCCCTGTTCAAAACCCGGGAGAAGGA...TCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp AGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGTGAGGGGCCGCAAGGACACTGTAGCCTGTaGGTCTCAGTGTATGACAGA +
Preference number: 5 (lower is better)
Translates to: RKGPTFTFLIRGQGEGPQGHCSL*VSVYDR
Trigger: TCTGTCATACACTGAGACCAACAGGCTACAGTGTCC...TTGCGGCCCCTCACCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp TCCGGACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGAGGACACTGTAGCCTGTaGGTCTCAGTGTATGACAGA +
Preference number: 5 (lower is better)
Translates to: SGQQGWRKGPTFTFLIRGGHCSL*VSVYDR
Trigger: TCTGTCATACACTGAGACCAACAGGCTACAGTGTCC...TCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGTCCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp ACAACAGGGATGGAGGAAAGGTCCCACATTCACATTCCTGATACGTGGACAAGGGGACACTGTAGCCTGTaGGTCTCAGTGTATGACAGA +
Preference number: 5 (lower is better)
Translates to: TTGMEERSHIHIPDTWTRGHCSL*VSVYDR
Trigger: TCTGTCATACACTGAGACCAACAGGCTACAGTGTCC...CCTTGTCCACGTATCAGGAATGTGAATGTGGGACCTTTCCTCCATCCCTGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS-3UTR CAA 90 bp TTGAATGTCAGCTCAACACAGCCTCCTATACCGAGGCATTGTGAACCGCATCTCGGACACTGTAGCCTGTaGGTCTCAGTGTATGACAGA +
Preference number: 5 (lower is better)
Translates to: LNVSSTQPPIPRHCEPHLGHCSL*VSVYDR
Trigger: TCTGTCATACACTGAGACCAACAGGCTACAGTGTCC...GAGATGCGGTTCACAATGCCTCGGTATAGGAGGCTGTGTTGAGCTGACATTCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000465801.5
ENST00000487279.6
ENST00000619571.5
CDS TCA 72 bp CAAGTCTCCTCCCCCGGCGAAGTGGTCGCCTCCCAGTaGGTCCCCCAGTGGCCCGGCCAGGCCCTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: QVSSPGEVVASQ*VPQWPGQALLL
Trigger: GAGCAGCAGGGCCTGGCCGGGCCACTGGGGGACTCACTGGGAGGCGACCACTTCGCCGGGGGAGGAGACTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000488007.5
ENST00000619571.5
CDS CAA 90 bp GCGACGACCCAGGCCCCGCCGGCCCTGCTTACCCTCCTCCAGCGCTaGCTGCAGTTGCTTCTCCAACAGCCGGTTCCGGCGCTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: ATTQAPPALLTLLQR*LQLLLQQPVPALQL
Trigger: GAGCTGGAGCGCCGGAACCGGCTGTTGGAGAAGCAACTGCAGCAAGCGCTGGAGGAGGGTAAGCAGGGCCGGCGGGGCCTGGGTCGTCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000488007.5
ENST00000619571.5
CDS TCA 72 bp GGCGGGCGTGCGAGAACGACCAGATGGTGCCGGGCATaGAGCGGGCCGACGAGGAATAGGTGGTGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: GGRARTTRWCRA*SGPTRNRWWRW
Trigger: CCACCTCCACCACCTATTCCTCGTCGGCCCGCTTCATGCCCGGCACCATCTGGTCGTTCTCGCACGCCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000488007.5
ENST00000619571.5
CDS CAA 72 bp CCGGCCCTGCTTACCCTCCTCCAGCGCTTGCTGCAGTaGCTTCTCCAACAGCCGGTTCCGGCGCTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: PALLTLLQRLLQ*LLQQPVPALQL
Trigger: GAGCTGGAGCGCCGGAACCGGCTGTTGGAGAAGCAACTGCAGCAAGCGCTGGAGGAGGGTAAGCAGGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000488007.5
ENST00000619571.5
CDS CCA 72 bp AGGGAAGCGGGGGAGGCCAGCCAAGGAGGGATGGGATaGGACGCATTCCAAAGGGCCAAGTCAGGGAGAGAG +
Preference number: 6 (lower is better)
Translates to: REAGEASQGGMG*DAFQRAKSGRE
Trigger: CTCTCTCCCTGACTTGGCCCTTTGGAATGCGTCCCATCCCATCCCTCCTTGGCTGGCCTCCCCCGCTTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488007.5
CDS CAA 72 bp CGGAACCGGAGGTTCAGGGTCTTGAGCACGTTGATGTaGGAGCCCAGGTCATTGCGGAGGGCCATGGCGGCA +
Preference number: 6 (lower is better)
Translates to: RNRRFRVLSTLM*EPRSLRRAMAA
Trigger: TGCCGCCATGGCCCTCCGCAATGACCTGGGCTCCAACATCAACGTGCTCAAGACCCTGAACCTCCGGTTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336604.8
ENST00000356896.8
ENST00000396840.6
ENST00000487279.6
ENST00000488007.5
ENST00000619571.5
CDS TCA 72 bp CTCCGACAGGTTCTGTCCAGGGAGCCCAGGGAACAGTaGGGAGGCGCCCAGTTCTCCAGACAAGGACGAATT +
Preference number: 6 (lower is better)
Translates to: LRQVLSREPREQ*GGAQFSRQGRI
Trigger: AATTCGTCCTTGTCTGGAGAACTGGGCGCCTCCTCACTGTTCCCTGGGCTCCCTGGACAGAACCTGTCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471408.5
CDS CCA 72 bp CATCCTTCCCACCACATTGCACCGGTGCCTCTTCTGTaGAGTCTCCCTGAGCTGACTGCACCCCTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: HPSHHIAPVPLL*SLPELTAPLFL
Trigger: CAGGAAGAGGGGTGCAGTCAGCTCAGGGAGACTCCACAGAAGAGGCACCGGTGCAATGTGGTGGGAAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471408.5
CDS CAA 72 bp ATTAGGCCTGGCAAGGTCCTCATCCTTCCCACCACATaGCACCGGTGCCTCTTCTGTGGAGTCTCCCTGAGC +
Preference number: 6 (lower is better)
Translates to: IRPGKVLILPTT*HRCLFCGVSLS
Trigger: GCTCAGGGAGACTCCACAGAAGAGGCACCGGTGCAATGTGGTGGGAAGGATGAGGACCTTGCCAGGCCTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471408.5
CDS CCA 72 bp TCTTTAATCACCTTCTCCAGGCTATCTTCCTGCTGCTaGAGTAGAAAGGGAAGCGGGGGAGGCCAGCCAAGG +
Preference number: 6 (lower is better)
Translates to: SLITFSRLSSCC*SRKGSGGGQPR
Trigger: CCTTGGCTGGCCTCCCCCGCTTCCCTTTCTACTCCAGCAGCAGGAAGATAGCCTGGAGAAGGTGATTAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488007.5
CDS GCA 72 bp GTATCTTTAATCACCTTCTCCAGGCTATCTTCCTGCTaGTGGAGTAGAAAGGGAAGCGGGGGAGGCCAGCCA +
Preference number: 6 (lower is better)
Translates to: VSLITFSRLSSC*WSRKGSGGGQP
Trigger: TGGCTGGCCTCCCCCGCTTCCCTTTCTACTCCAGCAGCAGGAAGATAGCCTGGAGAAGGTGATTAAAGATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488007.5
CDS GCA 72 bp TCCGTATCTTTAATCACCTTCTCCAGGCTATCTTCCTaGTGCTGGAGTAGAAAGGGAAGCGGGGGAGGCCAG +
Preference number: 6 (lower is better)
Translates to: SVSLITFSRLSS*CWSRKGSGGGQ
Trigger: CTGGCCTCCCCCGCTTCCCTTTCTACTCCAGCAGCAGGAAGATAGCCTGGAGAAGGTGATTAAAGATACGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488007.5
CDS TCA 72 bp GTAGAGTATGTAAAGGGGCCCGGTGAGTACGGCAAATaGGAACTAGACACAGCCTGTTCCAGGGCCCAGAAT +
Preference number: 6 (lower is better)
Translates to: VEYVKGPGEYGK*ELDTACSRAQN
Trigger: ATTCTGGGCCCTGGAACAGGCTGTGTCTAGTTCTCATTTGCCGTACTCACCGGGCCCCTTTACATACTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465801.5
CDS CCA 72 bp GCAACAGCTAACACTCTTCCAGCTAACACTGCATGCTaGGCACTGTCCCGAGTACATGACCACCCTCACAAT +
Preference number: 6 (lower is better)
Translates to: ATANTLPANTAC*ALSRVHDHPHN
Trigger: ATTGTGAGGGTGGTCATGTACTCGGGACAGTGCCCAGCATGCAGTGTTAGCTGGAAGAGTGTTAGCTGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471408.5
CDS TCA 72 bp AGGGAAAGAGAAAGTAGAGTATGTAAAGGGGCCCGGTaGGTACGGCAAATGAGAACTAGACACAGCCTGTTC +
Preference number: 6 (lower is better)
Translates to: RERESRVCKGAR*VRQMRTRHSLF
Trigger: GAACAGGCTGTGTCTAGTTCTCATTTGCCGTACTCACCGGGCCCCTTTACATACTCTACTTTCTCTTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465801.5