RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IDS (Homo sapiens)

Ensembl gene IDs: ENSG00000010404

Ensembl transcript IDs: ENST00000340855.11, ENST00000370441.8, ENST00000428056.6, ENST00000464251.5, ENST00000466019.1, ENST00000466323.5, ENST00000490775.5, ENST00000521702.1

Found 375 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAGCCCTCTTGCCTGGGCCGTCACATTACTCAGAGCCAAGTACCTaGGGGTTGGCTCCCAGCCACCTCATCTGGAACCAACTTGTCGGT +
Preference number: 1 (lower is better)
Translates to: GALLPGPSHYSEPST*GLAPSHLIWNQLVG
Trigger: ACCGACAAGTTGGTTCCAGATGAGGTGGCTGGGAGCCAACCCTCAGGTACTTGGCTCTGAGTAATGTGACGGCCCAGGCAAGAGGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR GCA 90 bp GTGCAGAAGAGAGAAACTGTCCTGAAGTACCAGGGGACCACTGAGTaGAGTGGGGCTGATGGCAGGTTCCACCACAACGGGCTATGCCTA +
Preference number: 1 (lower is better)
Translates to: VQKRETVLKYQGTTE*SGADGRFHHNGLCL
Trigger: TAGGCATAGCCCGTTGTGGTGGAACCTGCCATCAGCCCCACTGCACTCAGTGGTCCCCTGGTACTTCAGGACAGTTTCTCTCTTCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CCA 90 bp GACCTTGAGCTTTTGTTCCTCATTGGCAGTGGGAGCCCTCTTGCCTaGGCCGTCACATTACTCAGAGCCAAGTACCTGAGGGTTGGCTCC +
Preference number: 1 (lower is better)
Translates to: DLELLFLIGSGSPLA*AVTLLRAKYLRVGS
Trigger: GGAGCCAACCCTCAGGTACTTGGCTCTGAGTAATGTGACGGCCCAGGCAAGAGGGCTCCCACTGCCAATGAGGAACAAAAGCTCAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR GCA 90 bp CCAACAACTGTATGGCTTGCTCAGTGCTCTGTTTGTCAGGCAAGGTaGCCTCGGGAACATCCAGCACATCCACAGGGCAAAGCAGGTTGG +
Preference number: 1 (lower is better)
Translates to: PTTVWLAQCSVCQAR*PREHPAHPQGKAGW
Trigger: CCAACCTGCTTTGCCCTGTGGATGTGCTGGATGTTCCCGAGGGCACCTTGCCTGACAAACAGAGCACTGAGCAAGCCATACAGTTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR TCA 90 bp TCCTCTCTGCTTGAAGTTCTCATGTGCAGAAGAGAGAAACTGTCCTaGAGTACCAGGGGACCACTGAGTGCAGTGGGGCTGATGGCAGGT +
Preference number: 1 (lower is better)
Translates to: SSLLEVLMCRREKLS*STRGPLSAVGLMAG
Trigger: ACCTGCCATCAGCCCCACTGCACTCAGTGGTCCCCTGGTACTTCAGGACAGTTTCTCTCTTCTGCACATGAGAACTTCAAGCAGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CCA 90 bp CCCTCGGGAACATCCAGCACATCCACAGGGCAAAGCAGGTTGGCATaGAGTTCTCCATCTGGCCCTCGACATGTCTTAGTGTTTTCATAC +
Preference number: 1 (lower is better)
Translates to: PSGTSSTSTGQSRLA*SSPSGPRHVLVFSY
Trigger: GTATGAAAACACTAAGACATGTCGAGGGCCAGATGGAGAACTCCATGCCAACCTGCTTTGCCCTGTGGATGTGCTGGATGTTCCCGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR TCA 90 bp ATCGTCCAAAGCACTCAAGAGGCGGCCGACCTGTGTATCCAAATATaGCACAGAGGCAAAGTAGCTCTGGCGGATTTTCCGCCGTTCTCA +
Preference number: 1 (lower is better)
Translates to: IVQSTQEAADLCIQI*HRGKVALADFPPFS
Trigger: TGAGAACGGCGGAAAATCCGCCAGAGCTACTTTGCCTCTGTGTCATATTTGGATACACAGGTCGGCCGCCTCTTGAGTGCTTTGGACGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466323.5
3UTR TCA 90 bp ATCGTCCAAAGCACTCAAGAGGCGGCCGACCTGTGTATCCAAATATaGCACAGAGGCAAAGTAGCTCTGGCGGATTTTCCGCTGAAAGTC +
Preference number: 1 (lower is better)
Translates to: IVQSTQEAADLCIQI*HRGKVALADFPLKV
Trigger: GACTTTCAGCGGAAAATCCGCCAGAGCTACTTTGCCTCTGTGTCATATTTGGATACACAGGTCGGCCGCCTCTTGAGTGCTTTGGACGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR CCA 90 bp GGAGTTTATACCCAAAGCGCTTCACACAGTAAGGTATGGACAGCTTaGGAACCTGACAGGCGGCAAAAGATTGGGCAGAGAGGGAAGAGT +
Preference number: 1 (lower is better)
Translates to: GVYTQSASHSKVWTA*EPDRRQKIGQRGKS
Trigger: ACTCTTCCCTCTCTGCCCAATCTTTTGCCGCCTGTCAGGTTCCCAAGCTGTCCATACCTTACTGTGTGAAGCGCTTTGGGTATAAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR GCA 90 bp TGGCTGACGTTTTCATCTTTTCCAACAACTGTATGGCTTGCTCAGTaGTCTGTTTGTCAGGCAAGGTGCCCTCGGGAACATCCAGCACAT +
Preference number: 1 (lower is better)
Translates to: WLTFSSFPTTVWLAQ*SVCQARCPREHPAH
Trigger: ATGTGCTGGATGTTCCCGAGGGCACCTTGCCTGACAAACAGAGCACTGAGCAAGCCATACAGTTGTTGGAAAAGATGAAAACGTCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR GCA 90 bp AAAGGACTGGCTGACGTTTTCATCTTTTCCAACAACTGTATGGCTTaGTCAGTGCTCTGTTTGTCAGGCAAGGTGCCCTCGGGAACATCC +
Preference number: 1 (lower is better)
Translates to: KGLADVFIFSNNCMA*SVLCLSGKVPSGTS
Trigger: GGATGTTCCCGAGGGCACCTTGCCTGACAAACAGAGCACTGAGCAAGCCATACAGTTGTTGGAAAAGATGAAAACGTCAGCCAGTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR CCA 90 bp TGGAATACAATGGCACGATCTTCATTCACTGAAACCTCCGTCTCCTaGTTCAAGCGATTCTTGTGCCTTGGCCTCCCAAGAAGCTGGGAT +
Preference number: 1 (lower is better)
Translates to: WNTMARSSFTETSVS*FKRFLCLGLPRSWD
Trigger: ATCCCAGCTTCTTGGGAGGCCAAGGCACAAGAATCGCTTGAACCAGGAGACGGAGGTTTCAGTGAATGAAGATCGTGCCATTGTATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CCA 90 bp CTCTATTTGGGAGTTTATACCCAAAGCGCTTCACACAGTAAGGTATaGACAGCTTGGGAACCTGACAGGCGGCAAAAGATTGGGCAGAGA +
Preference number: 1 (lower is better)
Translates to: LYLGVYTQSASHSKV*TAWEPDRRQKIGQR
Trigger: TCTCTGCCCAATCTTTTGCCGCCTGTCAGGTTCCCAAGCTGTCCATACCTTACTGTGTGAAGCGCTTTGGGTATAAACTCCCAAATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR TCA 90 bp TGTTTTATCAGACACTCAGAGGAAAGTGGCATCTGTCCCATCAGGTaGGTTAGTGGACAGGGACACCAACGGGAGCTTTCAGTAACATGT +
Preference number: 1 (lower is better)
Translates to: CFIRHSEESGICPIR*VSGQGHQRELSVTC
Trigger: ACATGTTACTGAAAGCTCCCGTTGGTGTCCCTGTCCACTAACTCACCTGATGGGACAGATGCCACTTTCCTCTGAGTGTCTGATAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR TCA 90 bp GATGTGTGGCTTATGATACCCAACGGCCAGGAAGAAAGGACTGGCTaGCGTTTTCATCTTTTCCAACAACTGTATGGCTTGCTCAGTGCT +
Preference number: 1 (lower is better)
Translates to: DVWLMIPNGQEERTG*RFHLFQQLYGLLSA
Trigger: AGCACTGAGCAAGCCATACAGTTGTTGGAAAAGATGAAAACGTCAGCCAGTCCTTTCTTCCTGGCCGTTGGGTATCATAAGCCACACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR GCA 90 bp GATCAGGAAATGAACAGGGCCCTTCAGTCACGGAGAAGTCGTTGTTaGCAGAACAGTCAGTCACTTAACTGCTTAGAAGATCACCGTGTT +
Preference number: 1 (lower is better)
Translates to: DQEMNRALQSRRSRC*QNSQSLNCLEDHRV
Trigger: AACACGGTGATCTTCTAAGCAGTTAAGTGACTGACTGTTCTGGCAACAACGACTTCTCCGTGACTGAAGGGCCCTGTTCATTTCCTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CCA 90 bp GAGCCAGTTTATCAGGCAGCATTTGAGGTAAGGAATGTCCGTCTCTaGGACCCTATAGATCCTGGGTACCAGATTACACTCATCTTTCTG +
Preference number: 1 (lower is better)
Translates to: EPVYQAAFEVRNVRL*DPIDPGYQITLIFL
Trigger: CAGAAAGATGAGTGTAATCTGGTACCCAGGATCTATAGGGTCCCAGAGACGGACATTCCTTACCTCAAATGCTGCCTGATAAACTGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428056.6
3UTR TCA 90 bp ATCCCCATATTGGCATTAAAGAGAGCCAGTTTATCAGGCAGCATTTaGGGTAAGGAATGTCCGTCTCTGGGACCCTATAGATCCTGGGTA +
Preference number: 1 (lower is better)
Translates to: IPILALKRASLSGSI*GKECPSLGPYRSWV
Trigger: TACCCAGGATCTATAGGGTCCCAGAGACGGACATTCCTTACCTCAAATGCTGCCTGATAAACTGGCTCTCTTTAATGCCAATATGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428056.6
3UTR GCA 90 bp AGGAAGGGGCTGATTGCCTTTGTGACCTCACTACCAAACATACTTTaGTCACCTCCAGATAAGTCTTTGTGGGGCAAATGCAGGATAAAG +
Preference number: 1 (lower is better)
Translates to: RKGLIAFVTSLPNIL*SPPDKSLWGKCRIK
Trigger: CTTTATCCTGCATTTGCCCCACAAAGACTTATCTGGAGGTGAGCAAAGTATGTTTGGTAGTGAGGTCACAAAGGCAATCAGCCCCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR GCA 90 bp CCAAACATACTTTGCTCACCTCCAGATAAGTCTTTGTGGGGCAAATaGAGGATAAAGAAACAGCTCATAAGAGGCACTTGCCAACATCCA +
Preference number: 1 (lower is better)
Translates to: PNILCSPPDKSLWGK*RIKKQLIRGTCQHP
Trigger: TGGATGTTGGCAAGTGCCTCTTATGAGCTGTTTCTTTATCCTGCATTTGCCCCACAAAGACTTATCTGGAGGTGAGCAAAGTATGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CCA 90 bp ACCTCACTACCAAACATACTTTGCTCACCTCCAGATAAGTCTTTGTaGGGCAAATGCAGGATAAAGAAACAGCTCATAAGAGGCACTTGC +
Preference number: 1 (lower is better)
Translates to: TSLPNILCSPPDKSL*GKCRIKKQLIRGTC
Trigger: GCAAGTGCCTCTTATGAGCTGTTTCTTTATCCTGCATTTGCCCCACAAAGACTTATCTGGAGGTGAGCAAAGTATGTTTGGTAGTGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR TCA 90 bp CTAAACGAAAAGGTTTGGCTGTTACATATTCTCAGGCCAAATTGTTaGTGCATGTTTGGATTAACTAGCCCTCAGGCTGCTTCCAATATT +
Preference number: 1 (lower is better)
Translates to: LNEKVWLLHILRPNC*CMFGLTSPQAASNI
Trigger: AATATTGGAAGCAGCCTGAGGGCTAGTTAATCCAAACATGCATCAACAATTTGGCCTGAGAATATGTAACAGCCAAACCTTTTCGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CCA 90 bp AAACACACCCAAAACTACAATAAATTAGGGCAAGGGGTTTGTAAATaGCAGCTTCAGTCCTACTCCAAACCTTCTCACCCATATAAATCA +
Preference number: 1 (lower is better)
Translates to: KHTQNYNKLGQGVCK*QLQSYSKPSHPYKS
Trigger: TGATTTATATGGGTGAGAAGGTTTGGAGTAGGACTGAAGCTGCCATTTACAAACCCCTTGCCCTAATTTATTGTAGTTTTGGGTGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CCA 90 bp ACATGTCTTAGTGTTTTCATACTTCTCAGAGGAAGGATGATAAGGTaGAAAAGACCAGCTATACGGAGAATCATCGGTATGGTTAGAAGA +
Preference number: 1 (lower is better)
Translates to: TCLSVFILLRGRMIR*KRPAIRRIIGMVRR
Trigger: TCTTCTAACCATACCGATGATTCTCCGTATAGCTGGTCTTTTCCACCTTATCATCCTTCCTCTGAGAAGTATGAAAACACTAAGACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR-3UTR GCA 90 bp GGCGGCCGACCTGTGTATCCAAATATGACACAGAGGCAAAGTAGCTCTGGCGGATGGACGTCTTCCCGTTaGCTGATGTCCATCCAGGGG +
Preference number: 2 (lower is better)
Translates to: GGRPVYPNMTQRQSSSGGWTSSR*LMSIQG
Trigger: CCCCTGGATGGACATCAGGCAACGGGAAGACGTCCA...TCCGCCAGAGCTACTTTGCCTCTGTGTCATATTTGGATACACAGGTCGGCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR CAA 90 bp CAAGTACCTGAGGGTTGGCTCCCAGCCACCTCATCTGGAACCAACTaGTCGGTTTGTTCTCTCCCACCCAAACTCTTCCCCCATCAGAGG +
Preference number: 2 (lower is better)
Translates to: QVPEGWLPATSSGTN*SVCSLPPKLFPHQR
Trigger: CCTCTGATGGGGGAAGAGTTTGGGTGGGAGAGAACAAACCGACAAGTTGGTTCCAGATGAGGTGGCTGGGAGCCAACCCTCAGGTACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CAA 90 bp AAGGTGCCCTCGGGAACATCCAGCACATCCACAGGGCAAAGCAGGTaGGCATGGAGTTCTCCATCTGGCCCTCGACATGTCTTAGTGTTT +
Preference number: 2 (lower is better)
Translates to: KVPSGTSSTSTGQSR*AWSSPSGPRHVLVF
Trigger: AAACACTAAGACATGTCGAGGGCCAGATGGAGAACTCCATGCCAACCTGCTTTGCCCTGTGGATGTGCTGGATGTTCCCGAGGGCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR-3UTR GCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGGAGGAAGGGGCTGATTaGCTTTGTGACCTCACTACC +
Preference number: 2 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQEEGAD*LCDLTT
Trigger: GGTAGTGAGGTCACAAAGGCAATCAGCCCCTTCCTC...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR TCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGCCCAGTAGTAGGCACTaGCGGTGTTATCAAAGGACA +
Preference number: 2 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQPSSRH*RCYQRT
Trigger: TGTCCTTTGATAACACCGTCAGTGCCTACTACTGGG...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR GCA 90 bp GGCTTGGACGTCTTCCCGTTGCCTGATGTCCATCCAGGGGTTGTAGGCCACAGGAACAACTGTATGGCTTaGTCAGTGCTCTGTTTGTCA +
Preference number: 2 (lower is better)
Translates to: GLDVFPLPDVHPGVVGHRNNCMA*SVLCLS
Trigger: TGACAAACAGAGCACTGAGCAAGCCATACAGTTGTT...CCTGTGGCCTACAACCCCTGGATGGACATCAGGCAACGGGAAGACGTCCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR-3UTR TCA 90 bp TCCCCACAACAGACTGTGTTTTATCAGACACTCAGAGGAAAGTGGCATCTGTCCCTGGTTTTGAACTCCTaGCCTCGTGATCCACCCGCC +
Preference number: 2 (lower is better)
Translates to: SPQQTVFYQTLRGKWHLSLVLNS*PRDPPA
Trigger: GGCGGGTGGATCACGAGGTCAGGAGTTCAAAACCAG...GGACAGATGCCACTTTCCTCTGAGTGTCTGATAAAACACAGTCTGTTGTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR TCA 90 bp GATGGTGCTGTTGGCCAGCTGAAGATCGTCCAAAGCACTCAAGAGGCGGCCGACCTGTGTATCCAAATATaGCACAGAGGCAAAGTAGCT +
Preference number: 2 (lower is better)
Translates to: DGAVGQLKIVQSTQEAADLCIQI*HRGKVA
Trigger: AGCTACTTTGCCTCTGTGTCATATTTGGATACACAG...GTCGGCCGCCTCTTGAGTGCTTTGGACGATCTTCAGCTGGCCAACAGCACCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
3UTR-3UTR CCA 90 bp CAGAGGCAAAGTAGCTCTGGCGGATTTTCCGCTGAAAGTCCACAGGAATTGGACCAAAGCAGGTTGGCATaGAGTTCTCCATCTGGCCCT +
Preference number: 2 (lower is better)
Translates to: QRQSSSGGFSAESPQELDQSRLA*SSPSGP
Trigger: AGGGCCAGATGGAGAACTCCATGCCAACCTGCTTTG...GTCCAATTCCTGTGGACTTTCAGCGGAAAATCCGCCAGAGCTACTTTGCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR CAA 90 bp GTTTTCATCTTTTCCAACAACTGTATGGCTTGCTCAGTGCTCTGTTaGTCAGGCAAGGTGCCCTCGGGAACATCCAGCACATCCACAGGG +
Preference number: 2 (lower is better)
Translates to: VFIFSNNCMACSVLC*SGKVPSGTSSTSTG
Trigger: CCCTGTGGATGTGCTGGATGTTCCCGAGGGCACCTTGCCTGACAAACAGAGCACTGAGCAAGCCATACAGTTGTTGGAAAAGATGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR-3UTR TCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGCAGCAAAGAAAAAGCTaGGGGAAACCATCGACCAAA +
Preference number: 2 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQQQRKS*GKPSTK
Trigger: TTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTG...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR TCA 90 bp CTCAGTGCTCTGTTTGTCAGGCAAGGTGCCCTCGGGAACATCCAGCACATCCACCTGTGTATCCAAATATaGCACAGAGGCAAAGTAGCT +
Preference number: 2 (lower is better)
Translates to: LSALFVRQGALGNIQHIHLCIQI*HRGKVA
Trigger: AGCTACTTTGCCTCTGTGTCATATTTGGATACACAG...GTGGATGTGCTGGATGTTCCCGAGGGCACCTTGCCTGACAAACAGAGCACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR-3UTR TCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGCAGCAACAACGAGGATaGAGAACAGCAAAGAAAAAG +
Preference number: 2 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQQQQRG*RTAKKK
Trigger: CTTTTTCTTTGCTGTTCTTCATCCTCGTTGTTGCTG...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR CCA 90 bp TCCCCACAACAGACTGTGTTTTATCAGACACTCAGAGGAAAGTGGCATCTGTCCCCTCCTCTCACCAGCTaGAAGGGAGCACATCACATT +
Preference number: 2 (lower is better)
Translates to: SPQQTVFYQTLRGKWHLSPPLTS*KGAHHI
Trigger: AATGTGATGTGCTCCCTTCCAGCTGGTGAGAGGAGG...GGACAGATGCCACTTTCCTCTGAGTGTCTGATAAAACACAGTCTGTTGTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR CCA 90 bp GGCGGCCGACCTGTGTATCCAAATATGACACAGAGGCAAAGTAGCTCTGGCGGACCAGGAAGAAAGGACTaGCTGACGTTTTCATCTTTT +
Preference number: 2 (lower is better)
Translates to: GGRPVYPNMTQRQSSSGGPGRKD*LTFSSF
Trigger: AAAAGATGAAAACGTCAGCCAGTCCTTTCTTCCTGG...TCCGCCAGAGCTACTTTGCCTCTGTGTCATATTTGGATACACAGGTCGGCCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR-3UTR TCA 90 bp TCCCCACAACAGACTGTGTTTTATCAGACACTCAGAGGAAAGTGGCATCTGTCCTTCAGGATCAGGAAATaGACAGGGCCCTTCAGTCAC +
Preference number: 2 (lower is better)
Translates to: SPQQTVFYQTLRGKWHLSFRIRK*TGPFSH
Trigger: GTGACTGAAGGGCCCTGTTCATTTCCTGATCCTGAA...GGACAGATGCCACTTTCCTCTGAGTGTCTGATAAAACACAGTCTGTTGTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR GCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGAGTCAGTCACTTAACTaGTTAGAAGATCACCGTGTT +
Preference number: 2 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQSQSLN*LEDHRV
Trigger: AACACGGTGATCTTCTAAGCAGTTAAGTGACTGACT...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR GCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGCTACCAAACATACTTTaGTCACCTCCAGATAAGTCT +
Preference number: 2 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQLPNIL*SPPDKS
Trigger: AGACTTATCTGGAGGTGAGCAAAGTATGTTTGGTAG...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR GCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTCACCACAACGGGCTATaGCTAAGGCCCCAAGGGACA +
Preference number: 2 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIHHNGL*LRPQGT
Trigger: TGTCCCTTGGGGCCTTAGGCATAGCCCGTTGTGGTG...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR CCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGCTGCTTCCAATATTATaGGTAATCACAAAACGACCA +
Preference number: 2 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQLLPIL*VITKRP
Trigger: TGGTCGTTTTGTGATTACCCATAATATTGGAAGCAG...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR CCA 90 bp TCCCCACAACAGACTGTGTTTTATCAGACACTCAGAGGAAAGTGGCATCTGTCCTCACACAGTAAGGTATaGACAGCTTGGGAACCTGAC +
Preference number: 2 (lower is better)
Translates to: SPQQTVFYQTLRGKWHLSSHSKV*TAWEPD
Trigger: GTCAGGTTCCCAAGCTGTCCATACCTTACTGTGTGA...GGACAGATGCCACTTTCCTCTGAGTGTCTGATAAAACACAGTCTGTTGTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR TCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTGACAGCTTGGGAACCTaGCAGGCGGCAAAAGATTGG +
Preference number: 2 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIDSLGT*QAAKDW
Trigger: CCAATCTTTTGCCGCCTGTCAGGTTCCCAAGCTGTC...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR GCA 90 bp AAAGCACTCAAGAGGCGGCCGACCTGTGTATCCAAATATGACACAGAGGCAAAGTCCGCCGTTCTCACTTaGAGTCAAGAGAAAAGATAT +
Preference number: 2 (lower is better)
Translates to: KALKRRPTCVSKYDTEAKSAVLT*SQEKRY
Trigger: ATATCTTTTCTCTTGACTGCAAGTGAGAACGGCGGA...CTTTGCCTCTGTGTCATATTTGGATACACAGGTCGGCCGCCTCTTGAGTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466323.5
3UTR-3UTR CCA 90 bp TATGATACCCAACGGCCAGGAAGAAAGGACTGGCTGACGTTTTCATCTTTTCCAATGGAGTTCTCCATCTaGCCCTCGACATGTCTTAGT +
Preference number: 2 (lower is better)
Translates to: YDTQRPGRKDWLTFSSFPMEFSI*PSTCLS
Trigger: ACTAAGACATGTCGAGGGCCAGATGGAGAACTCCAT...TGGAAAAGATGAAAACGTCAGCCAGTCCTTTCTTCCTGGCCGTTGGGTATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR CAA 90 bp CAAACGATTGGTGATGTGAAGGCAACAACTGACAGTCCTCTCTGCTaGAAGTTCTCATGTGCAGAAGAGAGAAACTGTCCTGAAGTACCA +
Preference number: 2 (lower is better)
Translates to: QTIGDVKATTDSPLC*KFSCAEERNCPEVP
Trigger: TGGTACTTCAGGACAGTTTCTCTCTTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATCACCAATCGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CAA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTaGGTGATTAGCACCATACATGACAGTGATGTCAGGCAGGGCATG +
Preference number: 2 (lower is better)
Translates to: DKDYHLESRIKQGHP*VISTIHDSDVRQGM
Trigger: CATGCCCTGCCTGACATCACTGTCATGTATGGTGCTAATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR TCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTAGAGAGAAACTGTCCTaGAGTACCAGGGGACCACTG +
Preference number: 2 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIREKLS*STRGPL
Trigger: CAGTGGTCCCCTGGTACTTCAGGACAGTTTCTCTCT...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR TCA 90 bp GCCAGGAAGAAAGGACTGGCTGACGTTTTCATCTTTTCCAACAACTGTATGGCTCTCATGAGGAAACCATaGTCCGAGGTAAATGCAATG +
Preference number: 2 (lower is better)
Translates to: ARKKGLADVFIFSNNCMALMRKP*SEVNAM
Trigger: CATTGCATTTACCTCGGATCATGGTTTCCTCATGAG...AGCCATACAGTTGTTGGAAAAGATGAAAACGTCAGCCAGTCCTTTCTTCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR-3UTR GCA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGCGGAGAAGTCGTTGTTaGCAGAACAGTCAGTCACTT +
Preference number: 2 (lower is better)
Translates to: TGCIVKATVNMMTATTRMRRSRC*QNSQSL
Trigger: AAGTGACTGACTGTTCTGGCAACAACGACTTCTCCG...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CAA 90 bp GTGACCTCACTACCAAACATACTTTGCTCACCTCCAGATAAGTCTTaGTGGGGCAAATGCAGGATAAAGAAACAGCTCATAAGAGGCACT +
Preference number: 2 (lower is better)
Translates to: VTSLPNILCSPPDKS*WGKCRIKKQLIRGT
Trigger: AGTGCCTCTTATGAGCTGTTTCTTTATCCTGCATTTGCCCCACAAAGACTTATCTGGAGGTGAGCAAAGTATGTTTGGTAGTGAGGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR TCA 90 bp TCCCCACAACAGACTGTGTTTTATCAGACACTCAGAGGAAAGTGGCATCTGTCCCTCAGGCCAAATTGTTaGTGCATGTTTGGATTAACT +
Preference number: 2 (lower is better)
Translates to: SPQQTVFYQTLRGKWHLSLRPNC*CMFGLT
Trigger: AGTTAATCCAAACATGCATCAACAATTTGGCCTGAG...GGACAGATGCCACTTTCCTCTGAGTGTCTGATAAAACACAGTCTGTTGTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR TCA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAATTGGCAACAATACACTaGAGTAACAATGTAGTTTGC +
Preference number: 2 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKLATIH*SNNVVC
Trigger: GCAAACTACATTGTTACTTCAGTGTATTGTTGCCAA...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR GCA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGGGAGCACATCACATTTaGCATCCATGGTTGGCAAAA +
Preference number: 2 (lower is better)
Translates to: TGCIVKATVNMMTATTRMGAHHI*HPWLAK
Trigger: TTTTGCCAACCATGGATGGCAAATGTGATGTGCTCC...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR CCA 90 bp TCCCCACAACAGACTGTGTTTTATCAGACACTCAGAGGAAAGTGGCATCTGTCCCAGTCTTTTAATAGATaGCCATTGAGTTCAAGGGTC +
Preference number: 2 (lower is better)
Translates to: SPQQTVFYQTLRGKWHLSQSFNR*PLSSRV
Trigger: GACCCTTGAACTCAATGGCCATCTATTAAAAGACTG...GGACAGATGCCACTTTCCTCTGAGTGTCTGATAAAACACAGTCTGTTGTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR CCA 90 bp GGTATTTGTCCTCATGAGGAAACCATGATCCGAGGTAAATGCAATGATGGTGCTGGAGAATCATCGGTATaGTTAGAAGATATCCCTGGC +
Preference number: 2 (lower is better)
Translates to: GICPHEETMIRGKCNDGAGESSV*LEDIPG
Trigger: GCCAGGGATATCTTCTAACCATACCGATGATTCTCC...AGCACCATCATTGCATTTACCTCGGATCATGGTTTCCTCATGAGGACAAATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR-3UTR CCA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAAGCTTTTTACTACCACTaGCCTTTCTGGATACTTTCA +
Preference number: 2 (lower is better)
Translates to: DVKATTDSPLCLKFSCAEAFYYH*PFWILS
Trigger: TGAAAGTATCCAGAAAGGCCAGTGGTAGTAAAAAGC...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR CCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTCGACTTCTAACGCACTaGGTTTTAACAAGCCCCTCA +
Preference number: 2 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIRLLTH*VLTSPS
Trigger: TGAGGGGCTTGTTAAAACCCAGTGCGTTAGAAGTCG...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR GCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTACTGACAGTCCTCTCTaGTTGAAGTTCTCATGTGCA +
Preference number: 2 (lower is better)
Translates to: DKDYHLESRIKQGHPLVITDSPL*LKFSCA
Trigger: TGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGT...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CAA 90 bp GGGTGTATACCCAAAACAATTAAGAGCAGGGACTCGAACAGATATTaGTACATCCTTGTTGACAGCAACATTATTGCAATGGCCAAAAGG +
Preference number: 2 (lower is better)
Translates to: GCIPKTIKSRDSNRY*YILVDSNIIAMAKR
Trigger: CCTTTTGGCCATTGCAATAATGTTGCTGTCAACAAGGATGTACAAATATCTGTTCGAGTCCCTGCTCTTAATTGTTTTGGGTATACACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR TCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTGAACCCCTGCTCATGTaGAAGAGAGATTTCTACAAA +
Preference number: 2 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIEPLLM*KRDFYK
Trigger: TTTGTAGAAATCTCTCTTTCACATGAGCAGGGGTTC...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR GCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTTGGGTATGTCTCAAATaGTGGGCTTCTTTTCATCTC +
Preference number: 2 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIWVCLK*WASFHL
Trigger: GAGATGAAAAGAAGCCCAGCATTTGAGACATACCCA...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CAA 90 bp AAACAATTAAGAGCAGGGACTCGAACAGATATTTGTACATCCTTGTaGACAGCAACATTATTGCAATGGCCAAAAGGTAGAAATGACCCA +
Preference number: 2 (lower is better)
Translates to: KQLRAGTRTDICTSL*TATLLQWPKGRNDP
Trigger: TGGGTCATTTCTACCTTTTGGCCATTGCAATAATGTTGCTGTCAACAAGGATGTACAAATATCTGTTCGAGTCCCTGCTCTTAATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR CCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTTTTACCTGGAAACACTaGAGACTTTGTAAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIFTWKH*RLCKEK
Trigger: TTTCTCTTTACAAAGTCTCCAGTGTTTCCAGGTAAA...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR GCA 72 bp AGTGGGGCTGATGGCAGGTTCCACCACAACGGGCTATaGCTAAGGCCCCAAGGGACACCCTGGGTTCTACTT +
Preference number: 3 (lower is better)
Translates to: SGADGRFHHNGL*LRPQGTPWVLL
Trigger: AAGTAGAACCCAGGGTGTCCCTTGGGGCCTTAGGCATAGCCCGTTGTGGTGGAACCTGCCATCAGCCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CCA 72 bp CGGGAACATCCAGCACATCCACAGGGCAAAGCAGGTTaGCATGGAGTTCTCCATCTGGCCCTCGACATGTCT +
Preference number: 3 (lower is better)
Translates to: REHPAHPQGKAG*HGVLHLALDMS
Trigger: AGACATGTCGAGGGCCAGATGGAGAACTCCATGCCAACCTGCTTTGCCCTGTGGATGTGCTGGATGTTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR TCA 72 bp TCCGAGGTAAATGCAATGATGGTGCTGTTGGCCAGCTaGAGATCGTCCAAAGCACTCAAGAGGCGGCCGACC +
Preference number: 3 (lower is better)
Translates to: SEVNAMMVLLAS*RSSKALKRRPT
Trigger: GGTCGGCCGCCTCTTGAGTGCTTTGGACGATCTTCAGCTGGCCAACAGCACCATCATTGCATTTACCTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
3UTR TCA 72 bp GTAGGCCATCAGGGACCTCGGGATCGGGGGCCAGGGTaGTGTTCTCCAAGGGATACAACTTCTGAAATTCCT +
Preference number: 3 (lower is better)
Translates to: VGHQGPRDRGPG*CSPRDTTSEIP
Trigger: AGGAATTTCAGAAGTTGTATCCCTTGGAGAACATCACCCTGGCCCCCGATCCCGAGGTCCCTGATGGCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR GCA 72 bp GTATGGCTTGCTCAGTGCTCTGTTTGTCAGGCAAGGTaGCCTCGGGAACATCCAGCACATCCACAGGGCAAA +
Preference number: 3 (lower is better)
Translates to: VWLAQCSVCQAR*PREHPAHPQGK
Trigger: TTTGCCCTGTGGATGTGCTGGATGTTCCCGAGGGCACCTTGCCTGACAAACAGAGCACTGAGCAAGCCATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR CCA 72 bp CTTTTGTTCCTCATTGGCAGTGGGAGCCCTCTTGCCTaGGCCGTCACATTACTCAGAGCCAAGTACCTGAGG +
Preference number: 3 (lower is better)
Translates to: LLFLIGSGSPLA*AVTLLRAKYLR
Trigger: CCTCAGGTACTTGGCTCTGAGTAATGTGACGGCCCAGGCAAGAGGGCTCCCACTGCCAATGAGGAACAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CCA 72 bp ACATCCAGCACATCCACAGGGCAAAGCAGGTTGGCATaGAGTTCTCCATCTGGCCCTCGACATGTCTTAGTG +
Preference number: 3 (lower is better)
Translates to: TSSTSTGQSRLA*SSPSGPRHVLV
Trigger: CACTAAGACATGTCGAGGGCCAGATGGAGAACTCCATGCCAACCTGCTTTGCCCTGTGGATGTGCTGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR CCA 72 bp GGAATTGGACCATACGGCACACTGATGTTTAAGGCTTaGACGTCTTCCCGTTGCCTGATGTCCATCCAGGGG +
Preference number: 3 (lower is better)
Translates to: GIGPYGTLMFKA*TSSRCLMSIQG
Trigger: CCCCTGGATGGACATCAGGCAACGGGAAGACGTCCAAGCCTTAAACATCAGTGTGCCGTATGGTCCAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR TCA 72 bp AGACACTCAGAGGAAAGTGGCATCTGTCCCATCAGGTaGGTTAGTGGACAGGGACACCAACGGGAGCTTTCA +
Preference number: 3 (lower is better)
Translates to: RHSEESGICPIR*VSGQGHQRELS
Trigger: TGAAAGCTCCCGTTGGTGTCCCTGTCCACTAACTCACCTGATGGGACAGATGCCACTTTCCTCTGAGTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR TCA 72 bp AGCACTCAAGAGGCGGCCGACCTGTGTATCCAAATATaGCACAGAGGCAAAGTAGCTCTGGCGGATTTTCCG +
Preference number: 3 (lower is better)
Translates to: STQEAADLCIQI*HRGKVALADFP
Trigger: CGGAAAATCCGCCAGAGCTACTTTGCCTCTGTGTCATATTTGGATACACAGGTCGGCCGCCTCTTGAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
3UTR-3UTR CAA 90 bp GGCGGCCGACCTGTGTATCCAAATATGACACAGAGGCAAAGTAGCTCTGGCGGATTCCGCCGTTCTCACTaGCAGTCAAGAGAAAAGATA +
Preference number: 3 (lower is better)
Translates to: GGRPVYPNMTQRQSSSGGFRRSH*QSREKI
Trigger: TATCTTTTCTCTTGACTGCAAGTGAGAACGGCGGAA...TCCGCCAGAGCTACTTTGCCTCTGTGTCATATTTGGATACACAGGTCGGCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466323.5
3UTR TCA 72 bp AATTCCTTGGGGTATCTGAAGGGGATGTGTGGCTTATaGTACCCAACGGCCAGGAAGAAAGGACTGGCTGAC +
Preference number: 3 (lower is better)
Translates to: NSLGYLKGMCGL*YPTARKKGLAD
Trigger: GTCAGCCAGTCCTTTCTTCCTGGCCGTTGGGTATCATAAGCCACACATCCCCTTCAGATACCCCAAGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR CCA 72 bp TCACAGTCCTGCTGTGTTGCCGAGGCTGGAATACAATaGCACGATCTTCATTCACTGAAACCTCCGTCTCCT +
Preference number: 3 (lower is better)
Translates to: SQSCCVAEAGIQ*HDLHSLKPPSP
Trigger: AGGAGACGGAGGTTTCAGTGAATGAAGATCGTGCCATTGTATTCCAGCCTCGGCAACACAGCAGGACTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR TCA 72 bp TTCAGTAACATGTGGAAAGGCAAGACCCAAGAGCAGTaGGGGCTCTTGGCCATTATGGCCAAACGATTGGTG +
Preference number: 3 (lower is better)
Translates to: FSNMWKGKTQEQ*GLLAIMAKRLV
Trigger: CACCAATCGTTTGGCCATAATGGCCAAGAGCCCTCACTGCTCTTGGGTCTTGCCTTTCCACATGTTACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CCA 72 bp CACAGGGCAAAGCAGGTTGGCATGGAGTTCTCCATCTaGCCCTCGACATGTCTTAGTGTTTTCATACTTCTC +
Preference number: 3 (lower is better)
Translates to: HRAKQVGMEFSI*PSTCLSVFILL
Trigger: GAGAAGTATGAAAACACTAAGACATGTCGAGGGCCAGATGGAGAACTCCATGCCAACCTGCTTTGCCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR-3UTR CAA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAACTGCTCCAGAGTCACTaGGTTACCTCCCAGCACAAA +
Preference number: 3 (lower is better)
Translates to: DVKATTDSPLCLKFSCAELLQSH*VTSQHK
Trigger: TTTGTGCTGGGAGGTAACCAAGTGACTCTGGAGCAG...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CCA 72 bp GGAGTTTATACCCAAAGCGCTTCACACAGTAAGGTATaGACAGCTTGGGAACCTGACAGGCGGCAAAAGATT +
Preference number: 3 (lower is better)
Translates to: GVYTQSASHSKV*TAWEPDRRQKI
Trigger: AATCTTTTGCCGCCTGTCAGGTTCCCAAGCTGTCCATACCTTACTGTGTGAAGCGCTTTGGGTATAAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CCA 72 bp TATCAGGCAGCATTTGAGGTAAGGAATGTCCGTCTCTaGGACCCTATAGATCCTGGGTACCAGATTACACTC +
Preference number: 3 (lower is better)
Translates to: YQAAFEVRNVRL*DPIDPGYQITL
Trigger: GAGTGTAATCTGGTACCCAGGATCTATAGGGTCCCAGAGACGGACATTCCTTACCTCAAATGCTGCCTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428056.6
3UTR-3UTR CAA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGGTCACGGAGAAGTCGTaGTTGCCAGAACAGTCAGTC +
Preference number: 3 (lower is better)
Translates to: TGCIVKATVNMMTATTRMVTEKS*LPEQSV
Trigger: GACTGACTGTTCTGGCAACAACGACTTCTCCGTGAC...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR CAA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAAGGGCTGAGCCTCTATTaGGGAGTTTATACCCAAAGC +
Preference number: 3 (lower is better)
Translates to: DVKATTDSPLCLKFSCAEGLSLY*GVYTQS
Trigger: GCTTTGGGTATAAACTCCCAAATAGAGGCTCAGCCC...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR CAA 90 bp TCCCCACAACAGACTGTGTTTTATCAGACACTCAGAGGAAAGTGGCATCTGTCCGCTCATAAGAGGCACTaGCCAACATCCAACAAATTC +
Preference number: 3 (lower is better)
Translates to: SPQQTVFYQTLRGKWHLSAHKRH*PTSNKF
Trigger: GAATTTGTTGGATGTTGGCAAGTGCCTCTTATGAGC...GGACAGATGCCACTTTCCTCTGAGTGTCTGATAAAACACAGTCTGTTGTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR CAA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAATATTCAATGTCCAGATaGGGGAGGGGTCTGTGTGTT +
Preference number: 3 (lower is better)
Translates to: DVKATTDSPLCLKFSCAEYSMSR*GRGLCV
Trigger: AACACACAGACCCCTCCCCAATCTGGACATTGAATA...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR CAA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTTCCCAAAGAAAACCCTaGAGCGTGGGCTCCCCACAA +
Preference number: 3 (lower is better)
Translates to: DKDYHLESRIKQGHPLVISQRKP*SVGSPQ
Trigger: TTGTGGGGAGCCCACGCTCAAGGGTTTTCTTTGGGA...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR TCA 72 bp CTCAACAGAGGTCTGTCTAGACCCAGTAGTAGGCACTaGCGGTGTTATCAAAGGACAGGATCAAAGAGAGAT +
Preference number: 3 (lower is better)
Translates to: LNRGLSRPSSRH*RCYQRTGSKRD
Trigger: ATCTCTCTTTGATCCTGTCCTTTGATAACACCGTCAGTGCCTACTACTGGGTCTAGACAGACCTCTGTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR TCA 72 bp TGTTTCCTAGCATGTGCTGAATACACTACTAGACCTTaGGCTTTTGTTCCTCATTGGCAGTGGGAGCCCTCT +
Preference number: 3 (lower is better)
Translates to: CFLACAEYTTRP*AFVPHWQWEPS
Trigger: AGAGGGCTCCCACTGCCAATGAGGAACAAAAGCTCAAGGTCTAGTAGTGTATTCAGCACATGCTAGGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CCA 72 bp TTAGCACCATACATGACAGTGATGTCAGGCAGGGCATaGAGTAATAGCCGGGAAACTCTGATCCCAAAGAAA +
Preference number: 3 (lower is better)
Translates to: LAPYMTVMSGRA*SNSRETLIPKK
Trigger: TTTCTTTGGGATCAGAGTTTCCCGGCTATTACTCCATGCCCTGCCTGACATCACTGTCATGTATGGTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CCA 72 bp GTGGCTTATGATACCCAACGGCCAGGAAGAAAGGACTaGCTGACGTTTTCATCTTTTCCAACAACTGTATGG +
Preference number: 3 (lower is better)
Translates to: VAYDTQRPGRKD*LTFSSFPTTVW
Trigger: CCATACAGTTGTTGGAAAAGATGAAAACGTCAGCCAGTCCTTTCTTCCTGGCCGTTGGGTATCATAAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR-3UTR CAA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAATCTCAGGCCAAATTGTaGATGCATGTTTGGATTAAC +
Preference number: 3 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKSQAKL*MHVWIN
Trigger: GTTAATCCAAACATGCATCAACAATTTGGCCTGAGA...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR CAA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTCGGGATTTCACCATCTaGGCCAGGCTGGTTTTGAAC +
Preference number: 3 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIRDFTI*ARLVLN
Trigger: GTTCAAAACCAGCCTGGCCAAGATGGTGAAATCCCG...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR TCA 72 bp TTGGCATTAAAGAGAGCCAGTTTATCAGGCAGCATTTaGGGTAAGGAATGTCCGTCTCTGGGACCCTATAGA +
Preference number: 3 (lower is better)
Translates to: LALKRASLSGSI*GKECPSLGPYR
Trigger: TCTATAGGGTCCCAGAGACGGACATTCCTTACCTCAAATGCTGCCTGATAAACTGGCTCTCTTTAATGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428056.6
3UTR TCA 72 bp CTTATGATACCCAACGGCCAGGAAGAAAGGACTGGCTaGCGTTTTCATCTTTTCCAACAACTGTATGGCTTG +
Preference number: 3 (lower is better)
Translates to: LMIPNGQEERTG*RFHLFQQLYGL
Trigger: CAAGCCATACAGTTGTTGGAAAAGATGAAAACGTCAGCCAGTCCTTTCTTCCTGGCCGTTGGGTATCATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464251.5
3UTR GCA 72 bp CTGATTGCCTTTGTGACCTCACTACCAAACATACTTTaGTCACCTCCAGATAAGTCTTTGTGGGGCAAATGC +
Preference number: 3 (lower is better)
Translates to: LIAFVTSLPNIL*SPPDKSLWGKC
Trigger: GCATTTGCCCCACAAAGACTTATCTGGAGGTGAGCAAAGTATGTTTGGTAGTGAGGTCACAAAGGCAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR CAA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTGGGAGCACATCACATTaGCCATCCATGGTTGGCAAA +
Preference number: 3 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIGSTSH*PSMVGK
Trigger: TTTGCCAACCATGGATGGCAAATGTGATGTGCTCCC...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR CAA 90 bp TCCCCACAACAGACTGTGTTTTATCAGACACTCAGAGGAAAGTGGCATCTGTCCACTAAACGAAAAGGTTaGGCTGTTACATATTCTCAG +
Preference number: 3 (lower is better)
Translates to: SPQQTVFYQTLRGKWHLSTKRKG*AVTYSQ
Trigger: CTGAGAATATGTAACAGCCAAACCTTTTCGTTTAGT...GGACAGATGCCACTTTCCTCTGAGTGTCTGATAAAACACAGTCTGTTGTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR CAA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAATTGACAGCAACATTATaGCAATGGCCAAAAGGTAGA +
Preference number: 3 (lower is better)
Translates to: DVKATTDSPLCLKFSCAELTATL*QWPKGR
Trigger: TCTACCTTTTGGCCATTGCAATAATGTTGCTGTCAA...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CCA 72 bp CAAAACTACAATAAATTAGGGCAAGGGGTTTGTAAATaGCAGCTTCAGTCCTACTCCAAACCTTCTCACCCA +
Preference number: 3 (lower is better)
Translates to: QNYNKLGQGVCK*QLQSYSKPSHP
Trigger: TGGGTGAGAAGGTTTGGAGTAGGACTGAAGCTGCCATTTACAAACCCCTTGCCCTAATTTATTGTAGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR CAA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAATATTCTCAGGCCAAATaGTTGATGCATGTTTGGATT +
Preference number: 3 (lower is better)
Translates to: DVKATTDSPLCLKFSCAEYSQAK*LMHVWI
Trigger: AATCCAAACATGCATCAACAATTTGGCCTGAGAATA...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CCA 72 bp CCAAACATACTTTGCTCACCTCCAGATAAGTCTTTGTaGGGCAAATGCAGGATAAAGAAACAGCTCATAAGA +
Preference number: 3 (lower is better)
Translates to: PNILCSPPDKSL*GKCRIKKQLIR
Trigger: TCTTATGAGCTGTTTCTTTATCCTGCATTTGCCCCACAAAGACTTATCTGGAGGTGAGCAAAGTATGTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR-3UTR CAA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTGACTCGAACAGATATTaGTACATCCTTGTTGACAGC +
Preference number: 3 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIDSNRY*YILVDS
Trigger: GCTGTCAACAAGGATGTACAAATATCTGTTCGAGTC...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CCA 72 bp ATATACAAATGTCAGCAGTGGGTATGTCTCAAATGCTaGGCTTCTTTTCATCTCCAGTTTTCACATGTTCCA +
Preference number: 3 (lower is better)
Translates to: IYKCQQWVCLKC*ASFHLQFSHVP
Trigger: TGGAACATGTGAAAACTGGAGATGAAAAGAAGCCCAGCATTTGAGACATACCCACTGCTGACATTTGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR GCA 72 bp GAAATATACAAATGTCAGCAGTGGGTATGTCTCAAATaGTGGGCTTCTTTTCATCTCCAGTTTTCACATGTT +
Preference number: 3 (lower is better)
Translates to: EIYKCQQWVCLK*WASFHLQFSHV
Trigger: AACATGTGAAAACTGGAGATGAAAAGAAGCCCAGCATTTGAGACATACCCACTGCTGACATTTGTATATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR TCA 72 bp AACCAACCATCCCTAAAGAAGGATACTAATATATTTTaGGTGATTCAATCCACCCATGGATATAGTCACATC +
Preference number: 3 (lower is better)
Translates to: NQPSLKKDTNIF*VIQSTHGYSHI
Trigger: GATGTGACTATATCCATGGGTGGATTGAATCACTCAAAATATATTAGTATCCTTCTTTAGGGATGGTTGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR GCA 90 bp GATGGTGCTGTTGGCCAGCTGAAGATCGTCCAAAGCACTCAAGAGGCGGCCGACGTGGTCGAGTTGGCCTaGGTTTCGGATCCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: DGAVGQLKIVQSTQEAADVVELA*VSDPRA
Trigger: CGCCCTCGGATCCGAAACGCAGGCCAACTCGACCAC...GTCGGCCGCCTCTTGAGTGCTTTGGACGATCTTCAGCTGGCCAACAGCACCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR CCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGTCGGCCGGTCCGGGGTaGCGGCATTTCGGCTTCGAC +
Preference number: 4 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQSAGPG*RHFGFD
Trigger: GTCGAAGCCGAAATGCCGCCACCCCGGACCGGCCGA...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp GGCTTGGACGTCTTCCCGTTGCCTGATGTCCATCCAGGGGTTGTAGGCCACAGGCCCACAAGGGCAGGGTaGAAGACTTTTCCCACCGAC +
Preference number: 4 (lower is better)
Translates to: GLDVFPLPDVHPGVVGHRPTRAG*KTFPTD
Trigger: GTCGGTGGGAAAAGTCTTTCACCCTGCCCTTGTGGG...CCTGTGGCCTACAACCCCTGGATGGACATCAGGCAACGGGAAGACGTCCAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR GCA 90 bp TCGTCCAAAGCACTCAAGAGGCGGCCGACCTGTGTATCCAAATATGACACAGAGCGTGCGACTCTTCCCTaGGTCCCTCCCCTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SSKALKRRPTCVSKYDTERATLP*VPPLRG
Trigger: GCCCCGGAGGGGAGGGACGCAGGGAAGAGTCGCACG...CTCTGTGTCATATTTGGATACACAGGTCGGCCGCCTCTTGAGTGCTTTGGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR CCA 90 bp CACAGAGGCAAAGTAGCTCTGGCGGATTTTCCGCCGTTCTCACTTGCAGTCAAGTCGGCCGGTCCGGGGTaGCGGCATTTCGGCTTCGAC +
Preference number: 4 (lower is better)
Translates to: HRGKVALADFPPFSLAVKSAGPG*RHFGFD
Trigger: GTCGAAGCCGAAATGCCGCCACCCCGGACCGGCCGA...CTTGACTGCAAGTGAGAACGGCGGAAAATCCGCCAGAGCTACTTTGCCTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR TCA 90 bp GATGGTGCTGTTGGCCAGCTGAAGATCGTCCAAAGCACTCAAGAGGCGGCCGACCGTCTTCCCGTTGCCTaGTGTCCATCCAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: DGAVGQLKIVQSTQEAADRLPVA*CPSRGC
Trigger: ACAACCCCTGGATGGACATCAGGCAACGGGAAGACG...GTCGGCCGCCTCTTGAGTGCTTTGGACGATCTTCAGCTGGCCAACAGCACCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS-3UTR GCA 90 bp GTGCTCTGTTTGTCAGGCAAGGTGCCCTCGGGAACATCCAGCACATCCACAGGGTGGACGTCTTCCCGTTaGCTGATGTCCATCCAGGGG +
Preference number: 4 (lower is better)
Translates to: VLCLSGKVPSGTSSTSTGWTSSR*LMSIQG
Trigger: CCCCTGGATGGACATCAGGCAACGGGAAGACGTCCA...CCCTGTGGATGTGCTGGATGTTCCCGAGGGCACCTTGCCTGACAAACAGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR GCA 90 bp GATGGTGCTGTTGGCCAGCTGAAGATCGTCCAAAGCACTCAAGAGGCGGCCGACTGGACGTCTTCCCGTTaGCTGATGTCCATCCAGGGG +
Preference number: 4 (lower is better)
Translates to: DGAVGQLKIVQSTQEAADWTSSR*LMSIQG
Trigger: CCCCTGGATGGACATCAGGCAACGGGAAGACGTCCA...GTCGGCCGCCTCTTGAGTGCTTTGGACGATCTTCAGCTGGCCAACAGCACCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS-3UTR GCA 90 bp ATGACACAGAGGCAAAGTAGCTCTGGCGGATTTTCCGCCGTTCTCACTTGCAGTTGGCCGCAGCGCGAGTaGGTCCGTGCGACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: MTQRQSSSGGFSAVLTCSWPQRE*VRATLP
Trigger: GGGAAGAGTCGCACGGACGCACTCGCGCTGCGGCCA...ACTGCAAGTGAGAACGGCGGAAAATCCGCCAGAGCTACTTTGCCTCTGTGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR CCA 90 bp GAGCCAGTTTATCAGGCAGCATTTGAGGTAAGGAATGTCCGTCTCTGGGACCCTTCGGCCGGTCCGGGGTaGCGGCATTTCGGCTTCGAC +
Preference number: 4 (lower is better)
Translates to: EPVYQAAFEVRNVRLWDPSAGPG*RHFGFD
Trigger: GTCGAAGCCGAAATGCCGCCACCCCGGACCGGCCGA...AGGGTCCCAGAGACGGACATTCCTTACCTCAAATGCTGCCTGATAAACTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428056.6
CDS-3UTR TCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGCTCGTCGGGAACCCATaGAGACTGCGCAACACAGCC +
Preference number: 4 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQLVGNP*RLRNTA
Trigger: GGCTGTGTTGCGCAGTCTTCATGGGTTCCCGACGAG...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp AAGGTGCCCTCGGGAACATCCAGCACATCCACAGGGCAAAGCAGGTTGGCATGGGGGATGTGTGGCTTATaGTACCCAACGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KVPSGTSSTSTGQSRLAWGMCGL*YPTARK
Trigger: CTTCCTGGCCGTTGGGTATCATAAGCCACACATCCC...CCATGCCAACCTGCTTTGCCCTGTGGATGTGCTGGATGTTCCCGAGGGCACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR GCA 90 bp AAAGCACTCAAGAGGCGGCCGACCTGTGTATCCAAATATGACACAGAGGCAAAGGCGCGAGTGCGTCCGTaGGACTCTTCCCTGCGTCCC +
Preference number: 4 (lower is better)
Translates to: KALKRRPTCVSKYDTEAKARVRP*DSSLRP
Trigger: GGGACGCAGGGAAGAGTCGCACGGACGCACTCGCGC...CTTTGCCTCTGTGTCATATTTGGATACACAGGTCGGCCGCCTCTTGAGTGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR TCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGCGTCTTCCCGTTGCCTaGTGTCCATCCAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQRLPVA*CPSRGC
Trigger: ACAACCCCTGGATGGACATCAGGCAACGGGAAGACG...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR GCA 90 bp GAGCCAGTTTATCAGGCAGCATTTGAGGTAAGGAATGTCCGTCTCTGGGACCCTGTGGTCGAGTTGGCCTaGGTTTCGGATCCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: EPVYQAAFEVRNVRLWDPVVELA*VSDPRA
Trigger: CGCCCTCGGATCCGAAACGCAGGCCAACTCGACCAC...AGGGTCCCAGAGACGGACATTCCTTACCTCAAATGCTGCCTGATAAACTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428056.6
3UTR CAA 72 bp TCGGGAACATCCAGCACATCCACAGGGCAAAGCAGGTaGGCATGGAGTTCTCCATCTGGCCCTCGACATGTC +
Preference number: 4 (lower is better)
Translates to: SGTSSTSTGQSR*AWSSPSGPRHV
Trigger: GACATGTCGAGGGCCAGATGGAGAACTCCATGCCAACCTGCTTTGCCCTGTGGATGTGCTGGATGTTCCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR TCA 90 bp GAGCCAGTTTATCAGGCAGCATTTGAGGTAAGGAATGTCCGTCTCTGGGACCCTCTCGTCGGGAACCCATaGAGACTGCGCAACACAGCC +
Preference number: 4 (lower is better)
Translates to: EPVYQAAFEVRNVRLWDPLVGNP*RLRNTA
Trigger: GGCTGTGTTGCGCAGTCTTCATGGGTTCCCGACGAG...AGGGTCCCAGAGACGGACATTCCTTACCTCAAATGCTGCCTGATAAACTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428056.6
CDS-3UTR GCA 90 bp ATGACACAGAGGCAAAGTAGCTCTGGCGGATTTTCCGCCGTTCTCACTTGCAGTGCTCGGGGCGCACACTaGTTGCTGCGCAAAGGCATT +
Preference number: 4 (lower is better)
Translates to: MTQRQSSSGGFSAVLTCSARGAH*LLRKGI
Trigger: AATGCCTTTGCGCAGCAAGCAGTGTGCGCCCCGAGC...ACTGCAAGTGAGAACGGCGGAAAATCCGCCAGAGCTACTTTGCCTCTGTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR GCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGGTTTGTCAGGCAAGGTaGCCTCGGGAACATCCAGCA +
Preference number: 4 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQVCQAR*PREHPA
Trigger: TGCTGGATGTTCCCGAGGGCACCTTGCCTGACAAAC...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR GCA 90 bp GTGCTCTGTTTGTCAGGCAAGGTGCCCTCGGGAACATCCAGCACATCCACAGGGGTATGGCTTGCTCAGTaGTCTGTTTGTCAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: VLCLSGKVPSGTSSTSTGVWLAQ*SVCQAR
Trigger: CCTTGCCTGACAAACAGAGCACTGAGCAAGCCATAC...CCCTGTGGATGTGCTGGATGTTCCCGAGGGCACCTTGCCTGACAAACAGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR GCA 90 bp TGGGTAATCACAAAACGACCAGCTCTAACTCCTCCTCTCACCAGCTGGAAGGGACAGCGAGGTGGAACCTaGAGTCCTGCAAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: WVITKRPALTPPLTSWKGQRGGT*SPASPA
Trigger: GGCTGGACTTGCAGGACTGCAGGTTCCACCTCGCTG...TCCCTTCCAGCTGGTGAGAGGAGGAGTTAGAGCTGGTCGTTTTGTGATTACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGGGCCTCCCAAGAAGCTaGGATTACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQGLPRS*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAGCTTCTTGGGAGGCC...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp CACAGAGGCAAAGTAGCTCTGGCGGATTTTCCGCCGTTCTCACTTGCAGTCAAGGTGCTGTTGGCCAGCTaGAGATCGTCCAAAGCACTC +
Preference number: 4 (lower is better)
Translates to: HRGKVALADFPPFSLAVKVLLAS*RSSKAL
Trigger: GAGTGCTTTGGACGATCTTCAGCTGGCCAACAGCAC...CTTGACTGCAAGTGAGAACGGCGGAAAATCCGCCAGAGCTACTTTGCCTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR TCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGTGGCTCCATCAACTGTaGGGCGGAATCAAAAGGGTC +
Preference number: 4 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQWLHQL*GGIKRV
Trigger: GACCCTTTTGATTCCGCCTCACAGTTGATGGAGCCA...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp TGGGTAATCACAAAACGACCAGCTCTAACTCCTCCTCTCACCAGCTGGAAGGGACTGGTTTTGAACTCCTaGCCTCGTGATCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: WVITKRPALTPPLTSWKGLVLNS*PRDPPA
Trigger: GGCGGGTGGATCACGAGGTCAGGAGTTCAAAACCAG...TCCCTTCCAGCTGGTGAGAGGAGGAGTTAGAGCTGGTCGTTTTGTGATTACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp CTCAGTGCTCTGTTTGTCAGGCAAGGTGCCCTCGGGAACATCCAGCACATCCACTGGCTACTGTCATCTTaGAGCAGGCCCAATGCTAAC +
Preference number: 4 (lower is better)
Translates to: LSALFVRQGALGNIQHIHWLLSS*SRPNAN
Trigger: GTTAGCATTGGGCCTGCTTCAAGATGACAGTAGCCA...GTGGATGTGCTGGATGTTCCCGAGGGCACCTTGCCTGACAAACAGAGCACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR CCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGCAAAGCAGGTTGGCATaGAGTTCTCCATCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQQSRLA*SSPSGP
Trigger: AGGGCCAGATGGAGAACTCCATGCCAACCTGCTTTG...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp GGCGGCCGACCTGTGTATCCAAATATGACACAGAGGCAAAGTAGCTCTGGCGGACAGGGCAAAGCAGGTTaGCATGGAGTTCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: GGRPVYPNMTQRQSSSGGQGKAG*HGVLHL
Trigger: CAGATGGAGAACTCCATGCCAACCTGCTTTGCCCTG...TCCGCCAGAGCTACTTTGCCTCTGTGTCATATTTGGATACACAGGTCGGCCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS-3UTR TCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGGACCATACGGCACACTaGTGTTTAAGGCTTGGACGT +
Preference number: 4 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQDHTAH*CLRLGR
Trigger: ACGTCCAAGCCTTAAACATCAGTGTGCCGTATGGTC...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAAGCCTGCCTCCGGAAGTaGAGCCGTCCTTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: DVKATTDSPLCLKFSCAEACLRK*SRPSRN
Trigger: GTTCCTGGAAGGACGGCTTCACTTCCGGAGGCAGGC...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGTTCAGGATCAGGAAATaGACAGGGCCCTTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQFRIRK*TGPFSH
Trigger: GTGACTGAAGGGCCCTGTTCATTTCCTGATCCTGAA...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR GCA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAAGCTCGGGGCGCACACTaGTTGCTGCGCAAAGGCATT +
Preference number: 4 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQARGAH*LLRKGI
Trigger: AATGCCTTTGCGCAGCAAGCAGTGTGCGCCCCGAGC...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR GCA 90 bp TGTCCTCATGAGGAAACCATGATCCGAGGTAAATGCAATGATGGTGCTGTTGGCGCTCGGGGCGCACACTaGTTGCTGCGCAAAGGCATT +
Preference number: 4 (lower is better)
Translates to: CPHEETMIRGKCNDGAVGARGAH*LLRKGI
Trigger: AATGCCTTTGCGCAGCAAGCAGTGTGCGCCCCGAGC...GCCAACAGCACCATCATTGCATTTACCTCGGATCATGGTTTCCTCATGAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS-3UTR GCA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAATGGACGTCTTCCCGTTaGCTGATGTCCATCCAGGGG +
Preference number: 4 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKWTSSR*LMSIQG
Trigger: CCCCTGGATGGACATCAGGCAACGGGAAGACGTCCA...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR GCA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAACAGTGGGAGCCCTCTTaGCTGGGCCGTCACATTACT +
Preference number: 4 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKQWEPS*LGRHIT
Trigger: AGTAATGTGACGGCCCAGGCAAGAGGGCTCCCACTG...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp GAGCCAGTTTATCAGGCAGCATTTGAGGTAAGGAATGTCCGTCTCTGGGACCCTCATCTGTGGTCGAGTTaGCCTGCGTTTCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: EPVYQAAFEVRNVRLWDPHLWSS*PAFRIR
Trigger: TCGGATCCGAAACGCAGGCCAACTCGACCACAGATG...AGGGTCCCAGAGACGGACATTCCTTACCTCAAATGCTGCCTGATAAACTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428056.6
CDS-3UTR CCA 90 bp GATGGTGCTGTTGGCCAGCTGAAGATCGTCCAAAGCACTCAAGAGGCGGCCGACAAAGTCCACAGGAATTaGACCATACGGCACACTGAT +
Preference number: 4 (lower is better)
Translates to: DGAVGQLKIVQSTQEAADKVHRN*TIRHTD
Trigger: ATCAGTGTGCCGTATGGTCCAATTCCTGTGGACTTT...GTCGGCCGCCTCTTGAGTGCTTTGGACGATCTTCAGCTGGCCAACAGCACCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
3UTR CAA 72 bp CCAAAAGCAGTTAACCCCTGGCCTTTGCTCCTCTCCTaGTCCACGTCCCAACTCTTGTTTCCTAGCATGTGC +
Preference number: 4 (lower is better)
Translates to: PKAVNPWPLLLS*STSQLLFPSMC
Trigger: GCACATGCTAGGAAACAAGAGTTGGGACGTGGACAAGGAGAGGAGCAAAGGCCAGGGGTTAACTGCTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp GTCAAGAGAAAAGATATACATCTAGCCTTCCAGCAGGATTATGCTGAGCCCTGGCTCGTCGGGAACCCATaGAGACTGCGCAACACAGCC +
Preference number: 4 (lower is better)
Translates to: VKRKDIHLAFQQDYAEPWLVGNP*RLRNTA
Trigger: GGCTGTGTTGCGCAGTCTTCATGGGTTCCCGACGAG...CCAGGGCTCAGCATAATCCTGCTGGAAGGCTAGATGTATATCTTTTCTCTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR TCA 90 bp CGACCTGTGTATCCAAATATGACACAGAGGCAAAGTAGCTCTGGCGGATTTTCCCGTCTTCCCGTTGCCTaGTGTCCATCCAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: RPVYPNMTQRQSSSGGFSRLPVA*CPSRGC
Trigger: ACAACCCCTGGATGGACATCAGGCAACGGGAAGACG...GGAAAATCCGCCAGAGCTACTTTGCCTCTGTGTCATATTTGGATACACAGGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS-3UTR GCA 90 bp GTTTATCAGGCAGCATTTGAGGTAAGGAATGTCCGTCTCTGGGACCCTATAGATGCTCGGGGCGCACACTaGTTGCTGCGCAAAGGCATT +
Preference number: 4 (lower is better)
Translates to: VYQAAFEVRNVRLWDPIDARGAH*LLRKGI
Trigger: AATGCCTTTGCGCAGCAAGCAGTGTGCGCCCCGAGC...ATCTATAGGGTCCCAGAGACGGACATTCCTTACCTCAAATGCTGCCTGATAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428056.6
CDS-3UTR CCA 90 bp GAGCCAGTTTATCAGGCAGCATTTGAGGTAAGGAATGTCCGTCTCTGGGACCCTCGTTCAGAGCATCTGTaGTCGAGTTGGCCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: EPVYQAAFEVRNVRLWDPRSEHL*SSWPAF
Trigger: AAACGCAGGCCAACTCGACCACAGATGCTCTGAACG...AGGGTCCCAGAGACGGACATTCCTTACCTCAAATGCTGCCTGATAAACTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428056.6
CDS-3UTR CCA 90 bp ACACAGAGGCAAAGTAGCTCTGGCGGATTTTCCGCCGTTCTCACTTGCAGTCAACAAAGCAGGTTGGCATaGAGTTCTCCATCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TQRQSSSGGFSAVLTCSQQSRLA*SSPSGP
Trigger: AGGGCCAGATGGAGAACTCCATGCCAACCTGCTTTG...TTGACTGCAAGTGAGAACGGCGGAAAATCCGCCAGAGCTACTTTGCCTCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR CCA 90 bp GATGGTGCTGTTGGCCAGCTGAAGATCGTCCAAAGCACTCAAGAGGCGGCCGACTTTCCAACAACTGTATaGCTTGCTCAGTGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: DGAVGQLKIVQSTQEAADFPTTV*LAQCSV
Trigger: AACAGAGCACTGAGCAAGCCATACAGTTGTTGGAAA...GTCGGCCGCCTCTTGAGTGCTTTGGACGATCTTCAGCTGGCCAACAGCACCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS-3UTR CCA 90 bp AGGGCAAAGCAGGTTGGCATGGAGTTCTCCATCTGGCCCTCGACATGTCTTAGTTCTGAAGGGGATGTGTaGCTTATGATACCCAACGGC +
Preference number: 4 (lower is better)
Translates to: RAKQVGMEFSIWPSTCLSSEGDV*LMIPNG
Trigger: GCCGTTGGGTATCATAAGCCACACATCCCCTTCAGA...ACTAAGACATGTCGAGGGCCAGATGGAGAACTCCATGCCAACCTGCTTTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR CCA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAAAACGGGGCAGCGAGGTaGAACCTGCAGTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: DVKATTDSPLCLKFSCAENGAAR*NLQSCK
Trigger: CTTGCAGGACTGCAGGTTCCACCTCGCTGCCCCGTT...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp TGGGTAATCACAAAACGACCAGCTCTAACTCCTCCTCTCACCAGCTGGAAGGGACCTCCTCTCACCAGCTaGAAGGGAGCACATCACATT +
Preference number: 4 (lower is better)
Translates to: WVITKRPALTPPLTSWKGPPLTS*KGAHHI
Trigger: AATGTGATGTGCTCCCTTCCAGCTGGTGAGAGGAGG...TCCCTTCCAGCTGGTGAGAGGAGGAGTTAGAGCTGGTCGTTTTGTGATTACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp CTCAGTGCTCTGTTTGTCAGGCAAGGTGCCCTCGGGAACATCCAGCACATCCACGGAGAATCATCGGTATaGTTAGAAGATATCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LSALFVRQGALGNIQHIHGESSV*LEDIPG
Trigger: GCCAGGGATATCTTCTAACCATACCGATGATTCTCC...GTGGATGTGCTGGATGTTCCCGAGGGCACCTTGCCTGACAAACAGAGCACTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR TCA 90 bp ATCCAGCACATCCACAGGGCAAAGCAGGTTGGCATGGAGTTCTCCATCTGGCCCGAAGAAAGGACTGGCTaGCGTTTTCATCTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: IQHIHRAKQVGMEFSIWPEERTG*RFHLFQ
Trigger: TTGGAAAAGATGAAAACGTCAGCCAGTCCTTTCTTC...GGGCCAGATGGAGAACTCCATGCCAACCTGCTTTGCCCTGTGGATGTGCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR TCA 90 bp TCCCCACAACAGACTGTGTTTTATCAGACACTCAGAGGAAAGTGGCATCTGTCCGGGATGTGTGGCTTATaGTACCCAACGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPQQTVFYQTLRGKWHLSGMCGL*YPTARK
Trigger: CTTCCTGGCCGTTGGGTATCATAAGCCACACATCCC...GGACAGATGCCACTTTCCTCTGAGTGTCTGATAAAACACAGTCTGTTGTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAAGATCGGGGGCCAGGGTaGTGTTCTCCAAGGGATACA +
Preference number: 4 (lower is better)
Translates to: DVKATTDSPLCLKFSCAEDRGPG*CSPRDT
Trigger: TGTATCCCTTGGAGAACATCACCCTGGCCCCCGATC...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp GTCAAGAGAAAAGATATACATCTAGCCTTCCAGCAGGATTATGCTGAGCCCTGGGATCGGGGGCCAGGGTaGTGTTCTCCAAGGGATACA +
Preference number: 4 (lower is better)
Translates to: VKRKDIHLAFQQDYAEPWDRGPG*CSPRDT
Trigger: TGTATCCCTTGGAGAACATCACCCTGGCCCCCGATC...CCAGGGCTCAGCATAATCCTGCTGGAAGGCTAGATGTATATCTTTTCTCTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR TCA 90 bp TCCCCACAACAGACTGTGTTTTATCAGACACTCAGAGGAAAGTGGCATCTGTCCCTGCACAGCTCAACGTaGAATGAAGGAACGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SPQQTVFYQTLRGKWHLSLHSST*NEGTGQ
Trigger: CTGCCCCGTTCCTTCATTTCACGTTGAGCTGTGCAG...GGACAGATGCCACTTTCCTCTGAGTGTCTGATAAAACACAGTCTGTTGTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAAAGTCAGGGAAGACTCTaGCTGCTCAACAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKSQGRL*LLNRGL
Trigger: CAGACCTCTGTTGAGCAGTCAGAGTCTTCCCTGACT...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp TCCCCACAACAGACTGTGTTTTATCAGACACTCAGAGGAAAGTGGCATCTGTCCGACAGCTTGGGAACCTaGCAGGCGGCAAAAGATTGG +
Preference number: 4 (lower is better)
Translates to: SPQQTVFYQTLRGKWHLSDSLGT*QAAKDW
Trigger: CCAATCTTTTGCCGCCTGTCAGGTTCCCAAGCTGTC...GGACAGATGCCACTTTCCTCTGAGTGTCTGATAAAACACAGTCTGTTGTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp GGCGGCCGACCTGTGTATCCAAATATGACACAGAGGCAAAGTAGCTCTGGCGGACTCATGAGGAAACCATaGTCCGAGGTAAATGCAATG +
Preference number: 4 (lower is better)
Translates to: GGRPVYPNMTQRQSSSGGLMRKP*SEVNAM
Trigger: CATTGCATTTACCTCGGATCATGGTTTCCTCATGAG...TCCGCCAGAGCTACTTTGCCTCTGTGTCATATTTGGATACACAGGTCGGCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS-3UTR TCA 90 bp AGATCGTCCAAAGCACTCAAGAGGCGGCCGACCTGTGTATCCAAATATGACACACCAGCAGGATTATGCTaGGCCCTGGCCTACTTATAC +
Preference number: 4 (lower is better)
Translates to: RSSKALKRRPTCVSKYDTPAGLC*ALAYLY
Trigger: GTATAAGTAGGCCAGGGCTCAGCATAATCCTGCTGG...TGTGTCATATTTGGATACACAGGTCGGCCGCCTCTTGAGTGCTTTGGACGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR GCA 90 bp TGTCCTCATGAGGAAACCATGATCCGAGGTAAATGCAATGATGGTGCTGTTGGCGTTTGTCAGGCAAGGTaGCCTCGGGAACATCCAGCA +
Preference number: 4 (lower is better)
Translates to: CPHEETMIRGKCNDGAVGVCQAR*PREHPA
Trigger: TGCTGGATGTTCCCGAGGGCACCTTGCCTGACAAAC...GCCAACAGCACCATCATTGCATTTACCTCGGATCATGGTTTCCTCATGAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS-3UTR GCA 90 bp CTCAGTGCTCTGTTTGTCAGGCAAGGTGCCCTCGGGAACATCCAGCACATCCACAACAACTGTATGGCTTaGTCAGTGCTCTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: LSALFVRQGALGNIQHIHNNCMA*SVLCLS
Trigger: TGACAAACAGAGCACTGAGCAAGCCATACAGTTGTT...GTGGATGTGCTGGATGTTCCCGAGGGCACCTTGCCTGACAAACAGAGCACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR GCA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAAACAAGGTCCATGGATTaGCTGCCTGGCTCCATCAAC +
Preference number: 4 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKTRSMD*LPGSIN
Trigger: GTTGATGGAGCCAGGCAGGCAATCCATGGACCTTGT...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR GCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGGGAGCACATCACATTTaGCATCCATGGTTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQGAHHI*HPWLAK
Trigger: TTTTGCCAACCATGGATGGCAAATGTGATGTGCTCC...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAACGTTCAGAGCATCTGTaGTCGAGTTGGCCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKRSEHL*SSWPAF
Trigger: AAACGCAGGCCAACTCGACCACAGATGCTCTGAACG...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp AGGGCAAAGCAGGTTGGCATGGAGTTCTCCATCTGGCCCTCGACATGTCTTAGTATGGAGTTCTCCATCTaGCCCTCGACATGTCTTAGT +
Preference number: 4 (lower is better)
Translates to: RAKQVGMEFSIWPSTCLSMEFSI*PSTCLS
Trigger: ACTAAGACATGTCGAGGGCCAGATGGAGAACTCCAT...ACTAAGACATGTCGAGGGCCAGATGGAGAACTCCATGCCAACCTGCTTTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR CCA 90 bp CACAGAGGCAAAGTAGCTCTGGCGGATTTTCCGCCGTTCTCACTTGCAGTCAAGATGGAGTTCTCCATCTaGCCCTCGACATGTCTTAGT +
Preference number: 4 (lower is better)
Translates to: HRGKVALADFPPFSLAVKMEFSI*PSTCLS
Trigger: ACTAAGACATGTCGAGGGCCAGATGGAGAACTCCAT...CTTGACTGCAAGTGAGAACGGCGGAAAATCCGCCAGAGCTACTTTGCCTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR CCA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAACAGGGCAAAGCAGGTTaGCATGGAGTTCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKQGKAG*HGVLHL
Trigger: CAGATGGAGAACTCCATGCCAACCTGCTTTGCCCTG...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp AGCAGGTTGGCATGGAGTTCTCCATCTGGCCCTCGACATGTCTTAGTGTTTTCACAGGGCAAAGCAGGTTaGCATGGAGTTCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: SRLAWSSPSGPRHVLVFSQGKAG*HGVLHL
Trigger: CAGATGGAGAACTCCATGCCAACCTGCTTTGCCCTG...TGAAAACACTAAGACATGTCGAGGGCCAGATGGAGAACTCCATGCCAACCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR CCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGGAGGCTGGAATACAATaGCACGATCTTCATTCACTG +
Preference number: 4 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQEAGIQ*HDLHSL
Trigger: CAGTGAATGAAGATCGTGCCATTGTATTCCAGCCTC...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp TGGGTAATCACAAAACGACCAGCTCTAACTCCTCCTCTCACCAGCTGGAAGGGATGCTCCAGAGTCACTTaGTTACCTCCCAGCACAAAC +
Preference number: 4 (lower is better)
Translates to: WVITKRPALTPPLTSWKGCSRVT*LPPSTN
Trigger: GTTTGTGCTGGGAGGTAACCAAGTGACTCTGGAGCA...TCCCTTCCAGCTGGTGAGAGGAGGAGTTAGAGCTGGTCGTTTTGTGATTACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp GGAAGGATGATAAGGTGGAAAAGACCAGCTATACGGAGAATCATCGGTATGGTTGATCGGGGGCCAGGGTaGTGTTCTCCAAGGGATACA +
Preference number: 4 (lower is better)
Translates to: GRMIRWKRPAIRRIIGMVDRGPG*CSPRDT
Trigger: TGTATCCCTTGGAGAACATCACCCTGGCCCCCGATC...AACCATACCGATGATTCTCCGTATAGCTGGTCTTTTCCACCTTATCATCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR TCA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAAGTGCTGTTGGCCAGCTaGAGATCGTCCAAAGCACTC +
Preference number: 4 (lower is better)
Translates to: DVKATTDSPLCLKFSCAEVLLAS*RSSKAL
Trigger: GAGTGCTTTGGACGATCTTCAGCTGGCCAACAGCAC...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp TCCCCACAACAGACTGTGTTTTATCAGACACTCAGAGGAAAGTGGCATCTGTCCTTGTCAGAATTCCACTaGGGGATGTCTGAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SPQQTVFYQTLRGKWHLSLSEFH*GMSEGR
Trigger: CCGGCCTTCAGACATCCCTCAGTGGAATTCTGACAA...GGACAGATGCCACTTTCCTCTGAGTGTCTGATAAAACACAGTCTGTTGTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAAAGAGAGAAACTGTCCTaGAGTACCAGGGGACCACTG +
Preference number: 4 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQREKLS*STRGPL
Trigger: CAGTGGTCCCCTGGTACTTCAGGACAGTTTCTCTCT...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR GCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTGTGGTCGAGTTGGCCTaGGTTTCGGATCCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIVVELA*VSDPRA
Trigger: CGCCCTCGGATCCGAAACGCAGGCCAACTCGACCAC...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR GCA 90 bp GTTTATCAGGCAGCATTTGAGGTAAGGAATGTCCGTCTCTGGGACCCTATAGATGCGCACACTGCTTGCTaGGCAAAGGCATTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VYQAAFEVRNVRLWDPIDAHTAC*AKAFWK
Trigger: CTTCCAGAATGCCTTTGCGCAGCAAGCAGTGTGCGC...ATCTATAGGGTCCCAGAGACGGACATTCCTTACCTCAAATGCTGCCTGATAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428056.6
CDS-3UTR GCA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGCACCACAACGGGCTATaGCTAAGGCCCCAAGGGACA +
Preference number: 4 (lower is better)
Translates to: TGCIVKATVNMMTATTRMHHNGL*LRPQGT
Trigger: TGTCCCTTGGGGCCTTAGGCATAGCCCGTTGTGGTG...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR GCA 90 bp GGCGGCCGACCTGTGTATCCAAATATGACACAGAGGCAAAGTAGCTCTGGCGGATCCGCCGTTCTCACTTaGAGTCAAGAGAAAAGATAT +
Preference number: 4 (lower is better)
Translates to: GGRPVYPNMTQRQSSSGGSAVLT*SQEKRY
Trigger: ATATCTTTTCTCTTGACTGCAAGTGAGAACGGCGGA...TCCGCCAGAGCTACTTTGCCTCTGTGTCATATTTGGATACACAGGTCGGCCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR CCA 90 bp CACAGAGGCAAAGTAGCTCTGGCGGATTTTCCGCCGTTCTCACTTGCAGTCAAGCAGTTGGTCAATATTTaGGGACCTCACCAGCTTATC +
Preference number: 4 (lower is better)
Translates to: HRGKVALADFPPFSLAVKQLVNI*GPHQLI
Trigger: GATAAGCTGGTGAGGTCCCCAAATATTGACCAACTG...CTTGACTGCAAGTGAGAACGGCGGAAAATCCGCCAGAGCTACTTTGCCTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR CCA 90 bp GGCATGGAGTTCTCCATCTGGCCCTCGACATGTCTTAGTGTTTTCATACTTCTCCAAAGCAGGTTGGCATaGAGTTCTCCATCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GMEFSIWPSTCLSVFILLQSRLA*SSPSGP
Trigger: AGGGCCAGATGGAGAACTCCATGCCAACCTGCTTTG...GAGAAGTATGAAAACACTAAGACATGTCGAGGGCCAGATGGAGAACTCCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR CCA 90 bp CAAAGCAGGTTGGCATGGAGTTCTCCATCTGGCCCTCGACATGTCTTAGTGTTTCTGATGTTTAAGGCTTaGACGTCTTCCCGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: QSRLAWSSPSGPRHVLVFLMFKA*TSSRCL
Trigger: CAGGCAACGGGAAGACGTCCAAGCCTTAAACATCAG...AAACACTAAGACATGTCGAGGGCCAGATGGAGAACTCCATGCCAACCTGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR CCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGTACAGTTCCCCTGCATaGATGTCAGAAAAGTTAGCT +
Preference number: 4 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQYSSPA*MSEKLA
Trigger: AGCTAACTTTTCTGACATCCATGCAGGGGAACTGTA...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAAGCGATTCTTGTGCCTTaGCCTCCCAAGAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: DVKATTDSPLCLKFSCAEAILVP*PPKKLG
Trigger: TCCCAGCTTCTTGGGAGGCCAAGGCACAAGAATCGC...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGTACAAATGTCAGCAGTaGGTATGTCTCAAATGCTGG +
Preference number: 4 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQYKCQQ*VCLKCW
Trigger: CCAGCATTTGAGACATACCCACTGCTGACATTTGTA...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp TGGGTAATCACAAAACGACCAGCTCTAACTCCTCCTCTCACCAGCTGGAAGGGATCACACAGTAAGGTATaGACAGCTTGGGAACCTGAC +
Preference number: 4 (lower is better)
Translates to: WVITKRPALTPPLTSWKGSHSKV*TAWEPD
Trigger: GTCAGGTTCCCAAGCTGTCCATACCTTACTGTGTGA...TCCCTTCCAGCTGGTGAGAGGAGGAGTTAGAGCTGGTCGTTTTGTGATTACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAAACACTCAGAGGAAAGTaGCATCTGTCCCATCAGGTG +
Preference number: 4 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKTLRGK*HLSHQV
Trigger: CACCTGATGGGACAGATGCCACTTTCCTCTGAGTGT...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAACCCAGCCACCTCATCTaGAACCAACTTGTCGGTTTG +
Preference number: 4 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQPSHLI*NQLVGL
Trigger: CAAACCGACAAGTTGGTTCCAGATGAGGTGGCTGGG...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp AGAGGCGGCCGACCTGTGTATCCAAATATGACACAGAGGCAAAGTAGCTCTGGCGATTATGCTGAGCCCTaGCCTACTTATACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RGGRPVYPNMTQRQSSSGDYAEP*PTYTFW
Trigger: CCAGAAAGTATAAGTAGGCCAGGGCTCAGCATAATC...GCCAGAGCTACTTTGCCTCTGTGTCATATTTGGATACACAGGTCGGCCGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR TCA 90 bp GGTATTTGTCCTCATGAGGAAACCATGATCCGAGGTAAATGCAATGATGGTGCTGGGATGTGTGGCTTATaGTACCCAACGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GICPHEETMIRGKCNDGAGMCGL*YPTARK
Trigger: CTTCCTGGCCGTTGGGTATCATAAGCCACACATCCC...AGCACCATCATTGCATTTACCTCGGATCATGGTTTCCTCATGAGGACAAATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS-3UTR TCA 90 bp TGTCCTCATGAGGAAACCATGATCCGAGGTAAATGCAATGATGGTGCTGTTGGCGACCATACGGCACACTaGTGTTTAAGGCTTGGACGT +
Preference number: 4 (lower is better)
Translates to: CPHEETMIRGKCNDGAVGDHTAH*CLRLGR
Trigger: ACGTCCAAGCCTTAAACATCAGTGTGCCGTATGGTC...GCCAACAGCACCATCATTGCATTTACCTCGGATCATGGTTTCCTCATGAGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS-3UTR TCA 90 bp GGTGGAAAAGACCAGCTATACGGAGAATCATCGGTATGGTTAGAAGATATCCCTGTGCTGTTGGCCAGCTaGAGATCGTCCAAAGCACTC +
Preference number: 4 (lower is better)
Translates to: GGKDQLYGESSVWLEDIPVLLAS*RSSKAL
Trigger: GAGTGCTTTGGACGATCTTCAGCTGGCCAACAGCAC...AGGGATATCTTCTAACCATACCGATGATTCTCCGTATAGCTGGTCTTTTCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR TCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTCCACTGAGGGATGTCTaGAGGCCGGGGATACTGGCT +
Preference number: 4 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIPLRDV*RPGILA
Trigger: AGCCAGTATCCCCGGCCTTCAGACATCCCTCAGTGG...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp TGGGTAATCACAAAACGACCAGCTCTAACTCCTCCTCTCACCAGCTGGAAGGGACAGCAAAGAAAAAGCTaGGGGAAACCATCGACCAAA +
Preference number: 4 (lower is better)
Translates to: WVITKRPALTPPLTSWKGQQRKS*GKPSTK
Trigger: TTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTG...TCCCTTCCAGCTGGTGAGAGGAGGAGTTAGAGCTGGTCGTTTTGTGATTACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAAACAGTCCTCTCTGCTTaGAGTTCTCATGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKTVLSA*SSHVQK
Trigger: CTTCTGCACATGAGAACTTCAAGCAGAGAGGACTGT...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp AGCAGGTTGGCATGGAGTTCTCCATCTGGCCCTCGACATGTCTTAGTGTTTTCAAGGTATTTGTCCTCATaGGGAAACCATGATCCGAGG +
Preference number: 4 (lower is better)
Translates to: SRLAWSSPSGPRHVLVFSRYLSS*GNHDPR
Trigger: CCTCGGATCATGGTTTCCTCATGAGGACAAATACCT...TGAAAACACTAAGACATGTCGAGGGCCAGATGGAGAACTCCATGCCAACCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR TCA 90 bp AGATCGTCCAAAGCACTCAAGAGGCGGCCGACCTGTGTATCCAAATATGACACAAGGTATTTGTCCTCATaGGGAAACCATGATCCGAGG +
Preference number: 4 (lower is better)
Translates to: RSSKALKRRPTCVSKYDTRYLSS*GNHDPR
Trigger: CCTCGGATCATGGTTTCCTCATGAGGACAAATACCT...TGTGTCATATTTGGATACACAGGTCGGCCGCCTCTTGAGTGCTTTGGACGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS-3UTR TCA 90 bp GAGCCAGTTTATCAGGCAGCATTTGAGGTAAGGAATGTCCGTCTCTGGGACCCTTTATCAGGCAGCATTTaGGGTAAGGAATGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: EPVYQAAFEVRNVRLWDPLSGSI*GKECPS
Trigger: AGACGGACATTCCTTACCTCAAATGCTGCCTGATAA...AGGGTCCCAGAGACGGACATTCCTTACCTCAAATGCTGCCTGATAAACTGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428056.6
CDS-3UTR GCA 90 bp GGAAGGATGATAAGGTGGAAAAGACCAGCTATACGGAGAATCATCGGTATGGTTGTTTGTCAGGCAAGGTaGCCTCGGGAACATCCAGCA +
Preference number: 4 (lower is better)
Translates to: GRMIRWKRPAIRRIIGMVVCQAR*PREHPA
Trigger: TGCTGGATGTTCCCGAGGGCACCTTGCCTGACAAAC...AACCATACCGATGATTCTCCGTATAGCTGGTCTTTTCCACCTTATCATCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR GCA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAAGAGGAAGGGGCTGATTaGCTTTGTGACCTCACTACC +
Preference number: 4 (lower is better)
Translates to: DVKATTDSPLCLKFSCAEEEGAD*LCDLTT
Trigger: GGTAGTGAGGTCACAAAGGCAATCAGCCCCTTCCTC...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp GAGCCAGTTTATCAGGCAGCATTTGAGGTAAGGAATGTCCGTCTCTGGGACCCTCAGTTGGTCAATATTTaGGGACCTCACCAGCTTATC +
Preference number: 4 (lower is better)
Translates to: EPVYQAAFEVRNVRLWDPQLVNI*GPHQLI
Trigger: GATAAGCTGGTGAGGTCCCCAAATATTGACCAACTG...AGGGTCCCAGAGACGGACATTCCTTACCTCAAATGCTGCCTGATAAACTGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428056.6
CDS-3UTR CCA 90 bp ACACAGAGGCAAAGTAGCTCTGGCGGATTTTCCGCCGTTCTCACTTGCAGTCAAGGAGAATCATCGGTATaGTTAGAAGATATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TQRQSSSGGFSAVLTCSQGESSV*LEDIPG
Trigger: CCCTGGGATATCTTCTAACCATACCGATGATTCTCC...TTGACTGCAAGTGAGAACGGCGGAAAATCCGCCAGAGCTACTTTGCCTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR CCA 90 bp TCGTCCAAAGCACTCAAGAGGCGGCCGACCTGTGTATCCAAATATGACACAGAGGGAAGGATGATAAGGTaGAAAAGACCAGCTATACGG +
Preference number: 4 (lower is better)
Translates to: SSKALKRRPTCVSKYDTEGRMIR*KRPAIR
Trigger: CCGTATAGCTGGTCTTTTCCACCTTATCATCCTTCC...CTCTGTGTCATATTTGGATACACAGGTCGGCCGCCTCTTGAGTGCTTTGGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS-3UTR CCA 90 bp TGTCCTCATGAGGAAACCATGATCCGAGGTAAATGCAATGATGGTGCTGTTGGCTCTGAAGGGGATGTGTaGCTTATGATACCCAACGGC +
Preference number: 4 (lower is better)
Translates to: CPHEETMIRGKCNDGAVGSEGDV*LMIPNG
Trigger: GCCGTTGGGTATCATAAGCCACACATCCCCTTCAGA...GCCAACAGCACCATCATTGCATTTACCTCGGATCATGGTTTCCTCATGAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS-3UTR CCA 90 bp CAGAGGCAAAGTAGCTCTGGCGGATTTTCCGCTGAAAGTCCACAGGAATTGGACAAAGTCCACAGGAATTaGACCATACGGCACACTGAT +
Preference number: 4 (lower is better)
Translates to: QRQSSSGGFSAESPQELDKVHRN*TIRHTD
Trigger: ATCAGTGTGCCGTATGGTCCAATTCCTGTGGACTTT...GTCCAATTCCTGTGGACTTTCAGCGGAAAATCCGCCAGAGCTACTTTGCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR CCA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGCAAAATTGCTGTATTTaGCCCATTCTCCATGTTCAC +
Preference number: 4 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQQNCCI*PILHVH
Trigger: GTGAACATGGAGAATGGGCCAAATACAGCAATTTTG...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp TGGGTAATCACAAAACGACCAGCTCTAACTCCTCCTCTCACCAGCTGGAAGGGACACATTTGCCATCCATaGTTGGCAAAACTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: WVITKRPALTPPLTSWKGHICHP*LAKLKA
Trigger: TGCCTTGAGTTTTGCCAACCATGGATGGCAAATGTG...TCCCTTCCAGCTGGTGAGAGGAGGAGTTAGAGCTGGTCGTTTTGTGATTACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAACGACTTCTAACGCACTaGGTTTTAACAAGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKRLLTH*VLTSPS
Trigger: TGAGGGGCTTGTTAAAACCCAGTGCGTTAGAAGTCG...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAAAAGGTATGGACAGCTTaGGAACCTGACAGGCGGCAA +
Preference number: 4 (lower is better)
Translates to: DVKATTDSPLCLKFSCAEKVWTA*EPDRRQ
Trigger: TTGCCGCCTGTCAGGTTCCCAAGCTGTCCATACCTT...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGCAAGTACCTGAGGGTTaGCTCCCAGCCACCTCATCT +
Preference number: 4 (lower is better)
Translates to: TGCIVKATVNMMTATTRMQVPEG*LPATSS
Trigger: AGATGAGGTGGCTGGGAGCCAACCCTCAGGTACTTG...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp GTTTATCAGGCAGCATTTGAGGTAAGGAATGTCCGTCTCTGGGACCCTATAGATAGGAATGTCCGTCTCTaGGACCCTATAGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: VYQAAFEVRNVRLWDPIDRNVRL*DPIDPG
Trigger: CCCAGGATCTATAGGGTCCCAGAGACGGACATTCCT...ATCTATAGGGTCCCAGAGACGGACATTCCTTACCTCAAATGCTGCCTGATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428056.6
CDS-3UTR TCA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGCCTAGAGCCCACCCATaGTCCGAGGTAAATGCAATG +
Preference number: 4 (lower is better)
Translates to: TGCIVKATVNMMTATTRMPRAHP*SEVNAM
Trigger: CATTGCATTTACCTCGGATCATGGGTGGGCTCTAGG...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTCAGCTCAACGTGAAATaGAGGAACGGGGCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIQLNVK*RNGAAR
Trigger: CCTCGCTGCCCCGTTCCTTCATTTCACGTTGAGCTG...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp CGACCTGTGTATCCAAATATGACACAGAGGCAAAGTAGCTCTGGCGGATTTTCCGAACTTTGGTCCTCCTaGAAGTCCACAGGAATTGGA +
Preference number: 4 (lower is better)
Translates to: RPVYPNMTQRQSSSGGFSELWSS*KSTGIG
Trigger: TCCAATTCCTGTGGACTTTCAGGAGGACCAAAGTTC...GGAAAATCCGCCAGAGCTACTTTGCCTCTGTGTCATATTTGGATACACAGGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR GCA 90 bp TCGTCCAAAGCACTCAAGAGGCGGCCGACCTGTGTATCCAAATATGACACAGAGAACAACTGTATGGCTTaGTCAGTGCTCTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: SSKALKRRPTCVSKYDTENNCMA*SVLCLS
Trigger: TGACAAACAGAGCACTGAGCAAGCCATACAGTTGTT...CTCTGTGTCATATTTGGATACACAGGTCGGCCGCCTCTTGAGTGCTTTGGACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS-3UTR GCA 90 bp TCCCCACAACAGACTGTGTTTTATCAGACACTCAGAGGAAAGTGGCATCTGTCCGCTTCAGAAGGTTCTTaGCTTCTCTGCACAGCTCAA +
Preference number: 4 (lower is better)
Translates to: SPQQTVFYQTLRGKWHLSASEGS*LLCTAQ
Trigger: TTGAGCTGTGCAGAGAAGGCAAGAACCTTCTGAAGC...GGACAGATGCCACTTTCCTCTGAGTGTCTGATAAAACACAGTCTGTTGTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp GGTATTTGTCCTCATGAGGAAACCATGATCCGAGGTAAATGCAATGATGGTGCTCGTTCAGAGCATCTGTaGTCGAGTTGGCCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: GICPHEETMIRGKCNDGARSEHL*SSWPAF
Trigger: AAACGCAGGCCAACTCGACCACAGATGCTCTGAACG...AGCACCATCATTGCATTTACCTCGGATCATGGTTTCCTCATGAGGACAAATACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR CCA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAACTGATGTTTAAGGCTTaGACGTCTTCCCGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: DVKATTDSPLCLKFSCAELMFKA*TSSRCL
Trigger: CAGGCAACGGGAAGACGTCCAAGCCTTAAACATCAG...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAACAAGTCCAGCCAGCGTaGGAAAAAGAGACACAAGTT +
Preference number: 4 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQQVQPA*EKETQV
Trigger: AACTTGTGTCTCTTTTTCCCACGCTGGCTGGACTTG...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp TGGGTAATCACAAAACGACCAGCTCTAACTCCTCCTCTCACCAGCTGGAAGGGACCAGATAAGTCTTTGTaGGGCAAATGCAGGATAAAG +
Preference number: 4 (lower is better)
Translates to: WVITKRPALTPPLTSWKGPDKSL*GKCRIK
Trigger: CTTTATCCTGCATTTGCCCCACAAAGACTTATCTGG...TCCCTTCCAGCTGGTGAGAGGAGGAGTTAGAGCTGGTCGTTTTGTGATTACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTGGGAGCCCTCTTGCCTaGGCCGTCACATTACTCAGA +
Preference number: 4 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIGSPLA*AVTLLR
Trigger: TCTGAGTAATGTGACGGCCCAGGCAAGAGGGCTCCC...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAAGAAGAAAGGACTGGCTaGCGTTTTCATCTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKEERTG*RFHLFQ
Trigger: TTGGAAAAGATGAAAACGTCAGCCAGTCCTTTCTTC...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp GGTATTTGTCCTCATGAGGAAACCATGATCCGAGGTAAATGCAATGATGGTGCTGACCATACGGCACACTaGTGTTTAAGGCTTGGACGT +
Preference number: 4 (lower is better)
Translates to: GICPHEETMIRGKCNDGADHTAH*CLRLGR
Trigger: ACGTCCAAGCCTTAAACATCAGTGTGCCGTATGGTC...AGCACCATCATTGCATTTACCTCGGATCATGGTTTCCTCATGAGGACAAATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS-3UTR TCA 90 bp AAAGCACTCAAGAGGCGGCCGACCTGTGTATCCAAATATGACACAGAGGCAAAGCTGTGTATCCAAATATaGCACAGAGGCAAAGTAGCT +
Preference number: 4 (lower is better)
Translates to: KALKRRPTCVSKYDTEAKLCIQI*HRGKVA
Trigger: AGCTACTTTGCCTCTGTGTCATATTTGGATACACAG...CTTTGCCTCTGTGTCATATTTGGATACACAGGTCGGCCGCCTCTTGAGTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS-3UTR TCA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGCCCAGTAGTAGGCACTaGCGGTGTTATCAAAGGACA +
Preference number: 4 (lower is better)
Translates to: TGCIVKATVNMMTATTRMPSSRH*RCYQRT
Trigger: TGTCCTTTGATAACACCGTCAGTGCCTACTACTGGG...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAAGTACAAAGAGAACCATaGTCAAGGTCACTAACAAGC +
Preference number: 4 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKVQREP*SRSLTS
Trigger: GCTTGTTAGTGACCTTGATCATGGTTCTCTTTGTAC...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp ACACAGAGGCAAAGTAGCTCTGGCGGATTTTCCGCCGTTCTCACTTGCAGTCAAATACTTTCTGGTAGATaGAGTCTTCAGTCTGAAACC +
Preference number: 4 (lower is better)
Translates to: TQRQSSSGGFSAVLTCSQILSGR*SLQSET
Trigger: GGTTTCAGACTGAAGACTTCATCTACCAGAAAGTAT...TTGACTGCAAGTGAGAACGGCGGAAAATCCGCCAGAGCTACTTTGCCTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR GCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTGCGCACACTGCTTGCTaGGCAAAGGCATTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIAHTAC*AKAFWK
Trigger: CTTCCAGAATGCCTTTGCGCAGCAAGCAGTGTGCGC...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR GCA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGGTATGGCTTGCTCAGTaGTCTGTTTGTCAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: TGCIVKATVNMMTATTRMVWLAQ*SVCQAR
Trigger: CCTTGCCTGACAAACAGAGCACTGAGCAAGCCATAC...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR GCA 90 bp TCCCCACAACAGACTGTGTTTTATCAGACACTCAGAGGAAAGTGGCATCTGTCCACTGACAGTCCTCTCTaGTTGAAGTTCTCATGTGCA +
Preference number: 4 (lower is better)
Translates to: SPQQTVFYQTLRGKWHLSTDSPL*LKFSCA
Trigger: TGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGT...GGACAGATGCCACTTTCCTCTGAGTGTCTGATAAAACACAGTCTGTTGTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTCATCTGTGGTCGAGTTaGCCTGCGTTTCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIHLWSS*PAFRIR
Trigger: TCGGATCCGAAACGCAGGCCAACTCGACCACAGATG...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAAGGAGAATCATCGGTATaGTTAGAAGATATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQGESSV*LEDIPG
Trigger: CCCTGGGATATCTTCTAACCATACCGATGATTCTCC...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAAGGAAGGATGATAAGGTaGAAAAGACCAGCTATACGG +
Preference number: 4 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQGRMIR*KRPAIR
Trigger: CCGTATAGCTGGTCTTTTCCACCTTATCATCCTTCC...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp TGTCCTCATGAGGAAACCATGATCCGAGGTAAATGCAATGATGGTGCTGTTGGCGGAAGGATGATAAGGTaGAAAAGACCAGCTATACGG +
Preference number: 4 (lower is better)
Translates to: CPHEETMIRGKCNDGAVGGRMIR*KRPAIR
Trigger: CCGTATAGCTGGTCTTTTCCACCTTATCATCCTTCC...GCCAACAGCACCATCATTGCATTTACCTCGGATCATGGTTTCCTCATGAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS-3UTR CCA 90 bp AGATCGTCCAAAGCACTCAAGAGGCGGCCGACCTGTGTATCCAAATATGACACACCAGGAAGAAAGGACTaGCTGACGTTTTCATCTTTT +
Preference number: 4 (lower is better)
Translates to: RSSKALKRRPTCVSKYDTPGRKD*LTFSSF
Trigger: AAAAGATGAAAACGTCAGCCAGTCCTTTCTTCCTGG...TGTGTCATATTTGGATACACAGGTCGGCCGCCTCTTGAGTGCTTTGGACGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS-3UTR CCA 90 bp GGTATTTGTCCTCATGAGGAAACCATGATCCGAGGTAAATGCAATGATGGTGCTCTGATGTTTAAGGCTTaGACGTCTTCCCGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: GICPHEETMIRGKCNDGALMFKA*TSSRCL
Trigger: CAGGCAACGGGAAGACGTCCAAGCCTTAAACATCAG...AGCACCATCATTGCATTTACCTCGGATCATGGTTTCCTCATGAGGACAAATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS-3UTR CCA 90 bp TCCCCACAACAGACTGTGTTTTATCAGACACTCAGAGGAAAGTGGCATCTGTCCAAAGTCCACAGGAATTaGACCATACGGCACACTGAT +
Preference number: 4 (lower is better)
Translates to: SPQQTVFYQTLRGKWHLSKVHRN*TIRHTD
Trigger: ATCAGTGTGCCGTATGGTCCAATTCCTGTGGACTTT...GGACAGATGCCACTTTCCTCTGAGTGTCTGATAAAACACAGTCTGTTGTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp TGGGTAATCACAAAACGACCAGCTCTAACTCCTCCTCTCACCAGCTGGAAGGGATATACCTATAGTCTATaGTGCGTATGGAATAGCCCA +
Preference number: 4 (lower is better)
Translates to: WVITKRPALTPPLTSWKGYTYSL*CVWNSP
Trigger: TGGGCTATTCCATACGCACCATAGACTATAGGTATA...TCCCTTCCAGCTGGTGAGAGGAGGAGTTAGAGCTGGTCGTTTTGTGATTACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp TGGGTAATCACAAAACGACCAGCTCTAACTCCTCCTCTCACCAGCTGGAAGGGAGCTTTTTACTACCACTaGCCTTTCTGGATACTTTCA +
Preference number: 4 (lower is better)
Translates to: WVITKRPALTPPLTSWKGAFYYH*PFWILS
Trigger: TGAAAGTATCCAGAAAGGCCAGTGGTAGTAAAAAGC...TCCCTTCCAGCTGGTGAGAGGAGGAGTTAGAGCTGGTCGTTTTGTGATTACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAAATGGTCATGAATGAATaGGTGAAGAGAGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQMVMNE*VKRGMG
Trigger: TCCCATCCCTCTCTTCACCCATTCATTCATGACCAT...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAAATTCAATGTCCAGATTaGGGAGGGGTCTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQIQCPD*GGVCVF
Trigger: AAACACACAGACCCCTCCCCAATCTGGACATTGAAT...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGAGCAGTGAGGGCTCTTaGCCATTATGGCCAAACGAT +
Preference number: 4 (lower is better)
Translates to: TGCIVKATVNMMTATTRMSSEGS*PLWPND
Trigger: ATCGTTTGGCCATAATGGCCAAGAGCCCTCACTGCT...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGATGTCAGGCAGGGCATaGAGTAATAGCCGGGAAACT +
Preference number: 4 (lower is better)
Translates to: TGCIVKATVNMMTATTRMMSGRA*SNSRET
Trigger: AGTTTCCCGGCTATTACTCCATGCCCTGCCTGACAT...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGAAAGCAGTTAACCCCTaGCCTTTGCTCCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: TGCIVKATVNMMTATTRMKAVNP*PLLLSL
Trigger: CAAGGAGAGGAGCAAAGGCCAGGGGTTAACTGCTTT...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CAA 72 bp CTAGGAGTCTCCAAAGAAAATCACAGTCCTGCTGTGTaGCCGAGGCTGGAATACAATGGCACGATCTTCATT +
Preference number: 4 (lower is better)
Translates to: LGVSKENHSPAV*PRLEYNGTIFI
Trigger: AATGAAGATCGTGCCATTGTATTCCAGCCTCGGCAACACAGCAGGACTGTGATTTTCTTTGGAGACTCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CAA 72 bp ATGGACTTGGGAAAGGAAAAGGGGCTGAGCCTCTATTaGGGAGTTTATACCCAAAGCGCTTCACACAGTAAG +
Preference number: 4 (lower is better)
Translates to: MDLGKEKGLSLY*GVYTQSASHSK
Trigger: CTTACTGTGTGAAGCGCTTTGGGTATAAACTCCCAAATAGAGGCTCAGCCCCTTTTCCTTTCCCAAGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CAA 72 bp GGTGATGTGAAGGCAACAACTGACAGTCCTCTCTGCTaGAAGTTCTCATGTGCAGAAGAGAGAAACTGTCCT +
Preference number: 4 (lower is better)
Translates to: GDVKATTDSPLC*KFSCAEERNCP
Trigger: AGGACAGTTTCTCTCTTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAAGAACCCCTGCTCATGTaGAAGAGAGATTTCTACAAA +
Preference number: 4 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQEPLLM*KRDFYK
Trigger: TTTGTAGAAATCTCTCTTTCACATGAGCAGGGGTTC...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTAAGACCCAAGAGCAGTaGGGGCTCTTGGCCATTATG +
Preference number: 4 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIKTQEQ*GLLAIM
Trigger: CATAATGGCCAAGAGCCCTCACTGCTCTTGGGTCTT...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTATCTGTCCCATCAGGTaGGTTAGTGGACAGGGACAC +
Preference number: 4 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIICPIR*VSGQGH
Trigger: GTGTCCCTGTCCACTAACTCACCTGATGGGACAGAT...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAAAAGGGCATCCTTTGGTaGTTAGCACCATACATGACA +
Preference number: 4 (lower is better)
Translates to: DVKATTDSPLCLKFSCAEKGILW*LAPYMT
Trigger: TGTCATGTATGGTGCTAATCACCAAAGGATGCCCTT...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp AAAGCACTCAAGAGGCGGCCGACCTGTGTATCCAAATATGACACAGAGGCAAAGGAACAAAGATTCAGCTaGAAAATGTGTTCCCACAAG +
Preference number: 4 (lower is better)
Translates to: KALKRRPTCVSKYDTEAKEQRFS*KMCSHK
Trigger: CTTGTGGGAACACATTTTTCAGCTGAATCTTTGTTC...CTTTGCCTCTGTGTCATATTTGGATACACAGGTCGGCCGCCTCTTGAGTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR GCA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAAAACAACTGTATGGCTTaGTCAGTGCTCTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQNNCMA*SVLCLS
Trigger: TGACAAACAGAGCACTGAGCAAGCCATACAGTTGTT...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR GCA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAACTCATAAGAGGCACTTaGCAACATCCAACAAATTCA +
Preference number: 4 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKLIRGT*QHPTNS
Trigger: TGAATTTGTTGGATGTTGGCAAGTGCCTCTTATGAG...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR GCA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGAGGGAAGACTCTGACTaGTCAACAGAGGTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: TGCIVKATVNMMTATTRMREDSD*STEVCL
Trigger: TAGACAGACCTCTGTTGAGCAGTCAGAGTCTTCCCT...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAACAGTTGGTCAATATTTaGGGACCTCACCAGCTTATC +
Preference number: 4 (lower is better)
Translates to: DVKATTDSPLCLKFSCAEQLVNI*GPHQLI
Trigger: GATAAGCTGGTGAGGTCCCCAAATATTGACCAACTG...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGATGGAGTTCTCCATCTaGCCCTCGACATGTCTTAGT +
Preference number: 4 (lower is better)
Translates to: TGCIVKATVNMMTATTRMMEFSI*PSTCLS
Trigger: ACTAAGACATGTCGAGGGCCAGATGGAGAACTCCAT...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAATTTCCAACAACTGTATaGCTTGCTCAGTGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQFPTTV*LAQCSV
Trigger: AACAGAGCACTGAGCAAGCCATACAGTTGTTGGAAA...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAAGCAAATTCACACAAGTaGAAATACAGATGCCCAACT +
Preference number: 4 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKANSHK*KYRCPT
Trigger: AGTTGGGCATCTGTATTTCCACTTGTGTGAATTTGC...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAAACTCTGATAATGGGGTaGAGAGACACAGTAAGCATA +
Preference number: 4 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQTLIMG*RDTVSI
Trigger: TATGCTTACTGTGTCTCTCCACCCCATTATCAGAGT...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTGCTTTTGTTCCTCATTaGCAGTGGGAGCCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIAFVPH*QWEPSC
Trigger: GCAAGAGGGCTCCCACTGCCAATGAGGAACAAAAGC...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGCAAGGGGTTTGTAAATaGCAGCTTCAGTCCTACTCC +
Preference number: 4 (lower is better)
Translates to: TGCIVKATVNMMTATTRMQGVCK*QLQSYS
Trigger: GGAGTAGGACTGAAGCTGCCATTTACAAACCCCTTG...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp GTTTATCAGGCAGCATTTGAGGTAAGGAATGTCCGTCTCTGGGACCCTATAGATGGACCCTATAGATCCTaGGTACCAGATTACACTCAT +
Preference number: 4 (lower is better)
Translates to: VYQAAFEVRNVRLWDPIDGPYRS*VPDYTH
Trigger: ATGAGTGTAATCTGGTACCCAGGATCTATAGGGTCC...ATCTATAGGGTCCCAGAGACGGACATTCCTTACCTCAAATGCTGCCTGATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428056.6
CDS-3UTR TCA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAACTGTGTATCCAAATATaGCACAGAGGCAAAGTAGCT +
Preference number: 4 (lower is better)
Translates to: DVKATTDSPLCLKFSCAELCIQI*HRGKVA
Trigger: AGCTACTTTGCCTCTGTGTCATATTTGGATACACAG...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp AGACCAGCTATACGGAGAATCATCGGTATGGTTAGAAGATATCCCTGGCACACACTGTGTATCCAAATATaGCACAGAGGCAAAGTAGCT +
Preference number: 4 (lower is better)
Translates to: RPAIRRIIGMVRRYPWHTLCIQI*HRGKVA
Trigger: AGCTACTTTGCCTCTGTGTCATATTTGGATACACAG...TGTGTGCCAGGGATATCTTCTAACCATACCGATGATTCTCCGTATAGCTGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR TCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTGAAAGGGAGAAGGACTaGGAAGATGGCAATGGGAGT +
Preference number: 4 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIEREKD*EDGNGS
Trigger: ACTCCCATTGCCATCTTCTCAGTCCTTCTCCCTTTC...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGAAACGATTGGTGATGTaGAGGCAACAACTGACAGTC +
Preference number: 4 (lower is better)
Translates to: TGCIVKATVNMMTATTRMKRLVM*RQQLTV
Trigger: GACTGTCAGTTGTTGCCTTCACATCACCAATCGTTT...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR GCA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAATCACGGAATCGAAAATaGTTCAGAAGGTTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: DVKATTDSPLCLKFSCAESRNRK*FRRFLP
Trigger: AGGCAAGAACCTTCTGAAGCATTTTCGATTCCGTGA...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR GCA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAAAGTCAGTCACTTAACTaGTTAGAAGATCACCGTGTT +
Preference number: 4 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQSQSLN*LEDHRV
Trigger: AACACGGTGATCTTCTAAGCAGTTAAGTGACTGACT...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR GCA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAAGGCAATAAAGCCAAATaGACTGAACTATGTCATAAG +
Preference number: 4 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKGNKAK*TELCHK
Trigger: CTTATGACATAGTTCAGTGCATTTGGCTTTATTGCC...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR GCA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAACTACCAAACATACTTTaGTCACCTCCAGATAAGTCT +
Preference number: 4 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQLPNIL*SPPDKS
Trigger: AGACTTATCTGGAGGTGAGCAAAGTATGTTTGGTAG...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR GCA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAATGGGTATGTCTCAAATaGTGGGCTTCTTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: DVKATTDSPLCLKFSCAEWVCLK*WASFHL
Trigger: GAGATGAAAAGAAGCCCAGCATTTGAGACATACCCA...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTTCTGAAGGGGATGTGTaGCTTATGATACCCAACGGC +
Preference number: 4 (lower is better)
Translates to: DKDYHLESRIKQGHPLVISEGDV*LMIPNG
Trigger: GCCGTTGGGTATCATAAGCCACACATCCCCTTCAGA...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAACAGTCTTTTAATAGATaGCCATTGAGTTCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQQSFNR*PLSSRV
Trigger: GACCCTTGAACTCAATGGCCATCTATTAAAAGACTG...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAATCATTATACATATTGTaGTCCTGCAATGGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQSLYIL*SCNGSE
Trigger: TTCTGACCCATTGCAGGATCACAATATGTATAATGA...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAATTGGCAACAATACACTaGAGTAACAATGTAGTTTGC +
Preference number: 4 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQLATIH*SNNVVC
Trigger: GCAAACTACATTGTTACTTCAGTGTATTGTTGCCAA...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGTACACTACTAGACCTTaGGCTTTTGTTCCTCATTGG +
Preference number: 4 (lower is better)
Translates to: TGCIVKATVNMMTATTRMYTTRP*AFVPHW
Trigger: CCAATGAGGAACAAAAGCTCAAGGTCTAGTAGTGTA...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR GCA 90 bp TTCTCACTTGCAGTCAAGAGAAAAGATATACATCTAGCCTTCCAGCAGGATTATGTATGGCTTGCTCAGTaGTCTGTTTGTCAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: FSLAVKRKDIHLAFQQDYVWLAQ*SVCQAR
Trigger: CCTTGCCTGACAAACAGAGCACTGAGCAAGCCATAC...ATAATCCTGCTGGAAGGCTAGATGTATATCTTTTCTCTTGACTGCAAGTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR GCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTCGGAGAAGTCGTTGTTaGCAGAACAGTCAGTCACTT +
Preference number: 4 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIRRSRC*QNSQSL
Trigger: AAGTGACTGACTGTTCTGGCAACAACGACTTCTCCG...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp TATCCAAATATGACACAGAGGCAAAGTAGCTCTGGCGGATTTTCCGCTGAAAGTTTTCCAACAACTGTATaGCTTGCTCAGTGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: YPNMTQRQSSSGGFSAESFPTTV*LAQCSV
Trigger: AACAGAGCACTGAGCAAGCCATACAGTTGTTGGAAA...ACTTTCAGCGGAAAATCCGCCAGAGCTACTTTGCCTCTGTGTCATATTTGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR CCA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGCCAGGAAGAAAGGACTaGCTGACGTTTTCATCTTTT +
Preference number: 4 (lower is better)
Translates to: TGCIVKATVNMMTATTRMPGRKD*LTFSSF
Trigger: AAAAGATGAAAACGTCAGCCAGTCCTTTCTTCCTGG...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp GGAAGGATGATAAGGTGGAAAAGACCAGCTATACGGAGAATCATCGGTATGGTTCCAGGAAGAAAGGACTaGCTGACGTTTTCATCTTTT +
Preference number: 4 (lower is better)
Translates to: GRMIRWKRPAIRRIIGMVPGRKD*LTFSSF
Trigger: AAAAGATGAAAACGTCAGCCAGTCCTTTCTTCCTGG...AACCATACCGATGATTCTCCGTATAGCTGGTCTTTTCCACCTTATCATCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR CCA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAAAATATCAGGGGAACATaGGTAGCAACATCAAAATTG +
Preference number: 4 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQNIRGT*VATSKL
Trigger: CAATTTTGATGTTGCTACCCATGTTCCCCTGATATT...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAATTTACCTGGAAACACTaGAGACTTTGTAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKFTWKH*RLCKEK
Trigger: TTTCTCTTTACAAAGTCTCCAGTGTTTCCAGGTAAA...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CCA 90 bp TCCCCACAACAGACTGTGTTTTATCAGACACTCAGAGGAAAGTGGCATCTGTCCGCAACATTATTGCAATaGCCAAAAGGTAGAAATGAC +
Preference number: 4 (lower is better)
Translates to: SPQQTVFYQTLRGKWHLSATLLQ*PKGRND
Trigger: GTCATTTCTACCTTTTGGCCATTGCAATAATGTTGC...GGACAGATGCCACTTTCCTCTGAGTGTCTGATAAAACACAGTCTGTTGTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CAA 72 bp TATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTaGGTGATTAGCACCATACATGACAGTGATGTCAGG +
Preference number: 4 (lower is better)
Translates to: YHLESRIKQGHP*VISTIHDSDVR
Trigger: CCTGACATCACTGTCATGTATGGTGCTAATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTTTCAAGAGATTCCTCTaGAGAGCTATAACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIFKRFL*RAITCR
Trigger: CCTGCAGGTTATAGCTCTTCAGAGGAATCTCTTGAA...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
3UTR CAA 72 bp AGAGCAGGGACTCGAACAGATATTTGTACATCCTTGTaGACAGCAACATTATTGCAATGGCCAAAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: RAGTRTDICTSL*TATLLQWPKGR
Trigger: TCTACCTTTTGGCCATTGCAATAATGTTGCTGTCAACAAGGATGTACAAATATCTGTTCGAGTCCCTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTGAAATTCATCAGGATTaGAGCCAACCCACACAGTAT +
Preference number: 4 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIEIHQD*SQPTQY
Trigger: ATACTGTGTGGGTTGGCTTCAATCCTGATGAATTTC...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGTGGGGAAAGGTTATATaGAGCAACAAAGATACAGTT +
Preference number: 4 (lower is better)
Translates to: TGCIVKATVNMMTATTRMWGKVI*SNKDTV
Trigger: AACTGTATCTTTGTTGCTTCATATAACCTTTCCCCA...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp TTCTCACTTGCAGTCAAGAGAAAAGATATACATCTAGCCTTCCAGCAGGATTATCTCATGAGGAAACCATaGTCCGAGGTAAATGCAATG +
Preference number: 4 (lower is better)
Translates to: FSLAVKRKDIHLAFQQDYLMRKP*SEVNAM
Trigger: CATTGCATTTACCTCGGATCATGGTTTCCTCATGAG...ATAATCCTGCTGGAAGGCTAGATGTATATCTTTTCTCTTGACTGCAAGTGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR CCA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGCTAAACGAAAAGGTTTaGCTGTTACATATTCTCAGG +
Preference number: 4 (lower is better)
Translates to: TGCIVKATVNMMTATTRMLNEKV*LLHILR
Trigger: CCTGAGAATATGTAACAGCCAAACCTTTTCGTTTAG...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR TCA 90 bp TTCTCACTTGCAGTCAAGAGAAAAGATATACATCTAGCCTTCCAGCAGGATTATATGAAGTCTTCAGTCTaGAACCTGTGGAACTTTGGT +
Preference number: 4 (lower is better)
Translates to: FSLAVKRKDIHLAFQQDYMKSSV*NLWNFG
Trigger: ACCAAAGTTCCACAGGTTTCAGACTGAAGACTTCAT...ATAATCCTGCTGGAAGGCTAGATGTATATCTTTTCTCTTGACTGCAAGTGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466323.5
3UTR CAA 72 bp CAAATGCAGGATAAAGAAACAGCTCATAAGAGGCACTaGCCAACATCCAACAAATTCAGTTCAAAACCACAG +
Preference number: 4 (lower is better)
Translates to: QMQDKETAHKRH*PTSNKFSSKPQ
Trigger: CTGTGGTTTTGAACTGAATTTGTTGGATGTTGGCAAGTGCCTCTTATGAGCTGTTTCTTTATCCTGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS CCA 90 bp AGACTGCGCAACACAGCCGCCGCCCGGGCCCGCAGGCCCGGGCGCTaGCCGCAGCGCGAGTGCGTCCGTGCGACTCTTCCCTGCGTCCCT +
Preference number: 5 (lower is better)
Translates to: RLRNTAAARARRPGR*PQRECVRATLPCVP
Trigger: AGGGACGCAGGGAAGAGTCGCACGGACGCACTCGCGCTGCGGCCAGCGCCCGGGCCTGCGGGCCCGGGCGGCGGCTGTGTTGCGCAGTCT
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370441.8
ENST00000466323.5
CDS-3UTR CAA 90 bp GTGCTCTGTTTGTCAGGCAAGGTGCCCTCGGGAACATCCAGCACATCCACAGGGTGCTCAGTGCTCTGTTaGTCAGGCAAGGTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: VLCLSGKVPSGTSSTSTGCSVLC*SGKVPS
Trigger: CGAGGGCACCTTGCCTGACAAACAGAGCACTGAGCA...CCCTGTGGATGTGCTGGATGTTCCCGAGGGCACCTTGCCTGACAAACAGAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR CAA 90 bp GATGGTGCTGTTGGCCAGCTGAAGATCGTCCAAAGCACTCAAGAGGCGGCCGACTTGGACGTCTTCCCGTaGCCTGATGTCCATCCAGGG +
Preference number: 5 (lower is better)
Translates to: DGAVGQLKIVQSTQEAADLDVFP*PDVHPG
Trigger: CCCTGGATGGACATCAGGCAACGGGAAGACGTCCAA...GTCGGCCGCCTCTTGAGTGCTTTGGACGATCTTCAGCTGGCCAACAGCACCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS CCA 90 bp CCCTCGGGAACATCCAGCACATCCACAGGGCAAAGCAGGTTGGCATaGAGTTCTCCATCTGGCCCTCGACATGTCTGTAATCCCAGCTAC +
Preference number: 5 (lower is better)
Translates to: PSGTSSTSTGQSRLA*SSPSGPRHVCNPSY
Trigger: GTAGCTGGGATTACAGACATGTCGAGGGCCAGATGGAGAACTCCATGCCAACCTGCTTTGCCCTGTGGATGTGCTGGATGTTCCCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490775.5
CDS CCA 90 bp AGGTGCCCTCGGGAACATCCAGCACATCCACAGGGCAAAGCAGGTTaGCATGGAGTTCTCCATCTGGCCCTCGACATGTCTGTAATCCCA +
Preference number: 5 (lower is better)
Translates to: RCPREHPAHPQGKAG*HGVLHLALDMSVIP
Trigger: TGGGATTACAGACATGTCGAGGGCCAGATGGAGAACTCCATGCCAACCTGCTTTGCCCTGTGGATGTGCTGGATGTTCCCGAGGGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490775.5
CDS-3UTR CAA 90 bp AGAGGCGGCCGACCTGTGTATCCAAATATGACACAGAGGCAAAGTAGCTCTGGCGCATCTGTGGTCGAGTaGGCCTGCGTTTCGGATCCG +
Preference number: 5 (lower is better)
Translates to: RGGRPVYPNMTQRQSSSGASVVE*ACVSDP
Trigger: CGGATCCGAAACGCAGGCCAACTCGACCACAGATGC...GCCAGAGCTACTTTGCCTCTGTGTCATATTTGGATACACAGGTCGGCCGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR CAA 90 bp GAGCCAGTTTATCAGGCAGCATTTGAGGTAAGGAATGTCCGTCTCTGGGACCCTGCATCTGTGGTCGAGTaGGCCTGCGTTTCGGATCCG +
Preference number: 5 (lower is better)
Translates to: EPVYQAAFEVRNVRLWDPASVVE*ACVSDP
Trigger: CGGATCCGAAACGCAGGCCAACTCGACCACAGATGC...AGGGTCCCAGAGACGGACATTCCTTACCTCAAATGCTGCCTGATAAACTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428056.6
CDS-3UTR CAA 90 bp CACAGAGGCAAAGTAGCTCTGGCGGATTTTCCGCCGTTCTCACTTGCAGTCAAGTTGGACGTCTTCCCGTaGCCTGATGTCCATCCAGGG +
Preference number: 5 (lower is better)
Translates to: HRGKVALADFPPFSLAVKLDVFP*PDVHPG
Trigger: CCCTGGATGGACATCAGGCAACGGGAAGACGTCCAA...CTTGACTGCAAGTGAGAACGGCGGAAAATCCGCCAGAGCTACTTTGCCTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR CAA 90 bp GGCTTGCTCAGTGCTCTGTTTGTCAGGCAAGGTGCCCTCGGGAACATCCAGCACCAACAACTGTATGGCTaGCTCAGTGCTCTGTTTGTC +
Preference number: 5 (lower is better)
Translates to: GLLSALFVRQGALGNIQHQQLYG*LSALFV
Trigger: GACAAACAGAGCACTGAGCAAGCCATACAGTTGTTG...GTGCTGGATGTTCCCGAGGGCACCTTGCCTGACAAACAGAGCACTGAGCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464251.5
CDS-3UTR CAA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGTGGTTCAAGCGATTCTaGTGCCTTGGCCTCCCAAGA +
Preference number: 5 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQWFKRF*CLGLPR
Trigger: TCTTGGGAGGCCAAGGCACAAGAATCGCTTGAACCA...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGCGGGATTTCACCATCTaGGCCAGGCTGGTTTTGAAC +
Preference number: 5 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQRDFTI*ARLVLN
Trigger: GTTCAAAACCAGCCTGGCCAAGATGGTGAAATCCCG...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS TCA 90 bp CGAAAATGCTTCAGAAGGTTCTTGCCTTCTCTGCACAGCTCAACGTaGAATGAAGGAACGGGGCAGCGAGGTGGAACCTGCAGTCCTGCA +
Preference number: 5 (lower is better)
Translates to: RKCFRRFLPSLHSST*NEGTGQRGGTCSPA
Trigger: TGCAGGACTGCAGGTTCCACCTCGCTGCCCCGTTCCTTCATTTCACGTTGAGCTGTGCAGAGAAGGCAAGAACCTTCTGAAGCATTTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAATGCTCAGTGCTCTGTTaGTCAGGCAAGGTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKCSVLC*SGKVPS
Trigger: CGAGGGCACCTTGCCTGACAAACAGAGCACTGAGCA...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp GTGGGGACCAGTAGTCATACTGGTCAGCCAAGGAAAGGGGCATTGTGGAGTCAGTGCTTCAGAAGGTTCTaGCCTTCTCTGCACAGCTCA +
Preference number: 5 (lower is better)
Translates to: VGTSSHTGQPRKGALWSQCFRRF*PSLHSS
Trigger: TGAGCTGTGCAGAGAAGGCAAGAACCTTCTGAAGCA...CTGACTCCACAATGCCCCTTTCCTTGGCTGACCAGTATGACTACTGGTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp TGGGTAATCACAAAACGACCAGCTCTAACTCCTCCTCTCACCAGCTGGAAGGGATCCCAAAGAAAACCCTaGAGCGTGGGCTCCCCACAA +
Preference number: 5 (lower is better)
Translates to: WVITKRPALTPPLTSWKGSQRKP*SVGSPQ
Trigger: TTGTGGGGAGCCCACGCTCAAGGGTTTTCTTTGGGA...TCCCTTCCAGCTGGTGAGAGGAGGAGTTAGAGCTGGTCGTTTTGTGATTACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAAGCAGTGGGAGCCCTCTaGCCTGGGCCGTCACATTAC +
Preference number: 5 (lower is better)
Translates to: DVKATTDSPLCLKFSCAEAVGAL*PGPSHY
Trigger: GTAATGTGACGGCCCAGGCAAGAGGGCTCCCACTGC...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp TGGGTAATCACAAAACGACCAGCTCTAACTCCTCCTCTCACCAGCTGGAAGGGACCTTTGCTCCTCTCCTaGTCCACGTCCCAACTCTTG +
Preference number: 5 (lower is better)
Translates to: WVITKRPALTPPLTSWKGPLLLS*STSQLL
Trigger: CAAGAGTTGGGACGTGGACAAGGAGAGGAGCAAAGG...TCCCTTCCAGCTGGTGAGAGGAGGAGTTAGAGCTGGTCGTTTTGTGATTACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAAGCATCTGTGGTCGAGTaGGCCTGCGTTTCGGATCCG +
Preference number: 5 (lower is better)
Translates to: DVKATTDSPLCLKFSCAEASVVE*ACVSDP
Trigger: CGGATCCGAAACGCAGGCCAACTCGACCACAGATGC...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp CGACCTGTGTATCCAAATATGACACAGAGGCAAAGTAGCTCTGGCGGATTTTCCTGCTCAGTGCTCTGTTaGTCAGGCAAGGTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: RPVYPNMTQRQSSSGGFSCSVLC*SGKVPS
Trigger: CGAGGGCACCTTGCCTGACAAACAGAGCACTGAGCA...GGAAAATCCGCCAGAGCTACTTTGCCTCTGTGTCATATTTGGATACACAGGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS-3UTR CAA 90 bp GGCGGCCGACCTGTGTATCCAAATATGACACAGAGGCAAAGTAGCTCTGGCGGACAACAACTGTATGGCTaGCTCAGTGCTCTGTTTGTC +
Preference number: 5 (lower is better)
Translates to: GGRPVYPNMTQRQSSSGGQQLYG*LSALFV
Trigger: GACAAACAGAGCACTGAGCAAGCCATACAGTTGTTG...TCCGCCAGAGCTACTTTGCCTCTGTGTCATATTTGGATACACAGGTCGGCCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464251.5
ENST00000466323.5
CDS GCA 90 bp CCAAGTCACGGAATCGAAAATGCTTCAGAAGGTTCTTGCCTTCTCTaGACAGCTCAACGTGAAATGAAGGAACGGGGCAGCGAGGTGGAA +
Preference number: 5 (lower is better)
Translates to: PSHGIENASEGSCLL*TAQREMKERGSEVE
Trigger: TTCCACCTCGCTGCCCCGTTCCTTCATTTCACGTTGAGCTGTGCAGAGAAGGCAAGAACCTTCTGAAGCATTTTCGATTCCGTGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS GCA 90 bp GATCCTCTTCCAAGTCACGGAATCGAAAATGCTTCAGAAGGTTCTTaGCTTCTCTGCACAGCTCAACGTGAAATGAAGGAACGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: DPLPSHGIENASEGS*LLCTAQREMKERGS
Trigger: GCTGCCCCGTTCCTTCATTTCACGTTGAGCTGTGCAGAGAAGGCAAGAACCTTCTGAAGCATTTTCGATTCCGTGACTTGGAAGAGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS CCA 90 bp CCTCCTCTCACCAGCTGGAAGGGAGCACATCACATTTGCCATCCATaGTTGGCAAAACTCAAGGCATCAACAACTGGAAAAGATCTCCAC +
Preference number: 5 (lower is better)
Translates to: PPLTSWKGAHHICHP*LAKLKASTTGKDLH
Trigger: GTGGAGATCTTTTCCAGTTGTTGATGCCTTGAGTTTTGCCAACCATGGATGGCAAATGTGATGTGCTCCCTTCCAGCTGGTGAGAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS CCA 90 bp TGGGTAATCACAAAACGACCAGCTCTAACTCCTCCTCTCACCAGCTaGAAGGGAGCACATCACATTTGCCATCCATGGTTGGCAAAACTC +
Preference number: 5 (lower is better)
Translates to: WVITKRPALTPPLTS*KGAHHICHPWLAKL
Trigger: GAGTTTTGCCAACCATGGATGGCAAATGTGATGTGCTCCCTTCCAGCTGGTGAGAGGAGGAGTTAGAGCTGGTCGTTTTGTGATTACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp GAGCCAGTTTATCAGGCAGCATTTGAGGTAAGGAATGTCCGTCTCTGGGACCCTCCAGTTGGTCAATATTaGGGGACCTCACCAGCTTAT +
Preference number: 5 (lower is better)
Translates to: EPVYQAAFEVRNVRLWDPPVGQY*GTSPAY
Trigger: ATAAGCTGGTGAGGTCCCCAAATATTGACCAACTGG...AGGGTCCCAGAGACGGACATTCCTTACCTCAAATGCTGCCTGATAAACTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428056.6
CDS-3UTR CAA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGTTGGACGTCTTCCCGTaGCCTGATGTCCATCCAGGG +
Preference number: 5 (lower is better)
Translates to: TGCIVKATVNMMTATTRMLDVFP*PDVHPG
Trigger: CCCTGGATGGACATCAGGCAACGGGAAGACGTCCAA...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAAGTCACGGAGAAGTCGTaGTTGCCAGAACAGTCAGTC +
Preference number: 5 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQVTEKS*LPEQSV
Trigger: GACTGACTGTTCTGGCAACAACGACTTCTCCGTGAC...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAACTGCTCCAGAGTCACTaGGTTACCTCCCAGCACAAA +
Preference number: 5 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQLLQSH*VTSQHK
Trigger: TTTGTGCTGGGAGGTAACCAAGTGACTCTGGAGCAG...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp TCCCCACAACAGACTGTGTTTTATCAGACACTCAGAGGAAAGTGGCATCTGTCCAGCTTTTGTTCCTCATaGGCAGTGGGAGCCCTCTTG +
Preference number: 5 (lower is better)
Translates to: SPQQTVFYQTLRGKWHLSSFCSS*AVGALL
Trigger: CAAGAGGGCTCCCACTGCCAATGAGGAACAAAAGCT...GGACAGATGCCACTTTCCTCTGAGTGTCTGATAAAACACAGTCTGTTGTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS GCA 90 bp GCTCTAACTCCTCCTCTCACCAGCTGGAAGGGAGCACATCACATTTaGCATCCATGGTTGGCAAAACTCAAGGCATCAACAACTGGAAAA +
Preference number: 5 (lower is better)
Translates to: ALTPPLTSWKGAHHI*HPWLAKLKASTTGK
Trigger: TTTTCCAGTTGTTGATGCCTTGAGTTTTGCCAACCATGGATGGCAAATGTGATGTGCTCCCTTCCAGCTGGTGAGAGGAGGAGTTAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS CCA 90 bp CTCTCACCAGCTGGAAGGGAGCACATCACATTTGCCATCCATGGTTaGCAAAACTCAAGGCATCAACAACTGGAAAAGATCTCCACCTTG +
Preference number: 5 (lower is better)
Translates to: LSPAGREHITFAIHG*QNSRHQQLEKISTL
Trigger: CAAGGTGGAGATCTTTTCCAGTTGTTGATGCCTTGAGTTTTGCCAACCATGGATGGCAAATGTGATGTGCTCCCTTCCAGCTGGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp TGGGTAATCACAAAACGACCAGCTCTAACTCCTCCTCTCACCAGCTGGAAGGGAATTTGCCATCCATGGTaGGCAAAACTCAAGGCATCA +
Preference number: 5 (lower is better)
Translates to: WVITKRPALTPPLTSWKGICHPW*AKLKAS
Trigger: TGATGCCTTGAGTTTTGCCAACCATGGATGGCAAAT...TCCCTTCCAGCTGGTGAGAGGAGGAGTTAGAGCTGGTCGTTTTGTGATTACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp TGGGTAATCACAAAACGACCAGCTCTAACTCCTCCTCTCACCAGCTGGAAGGGAGCTCATAAGAGGCACTaGCCAACATCCAACAAATTC +
Preference number: 5 (lower is better)
Translates to: WVITKRPALTPPLTSWKGAHKRH*PTSNKF
Trigger: GAATTTGTTGGATGTTGGCAAGTGCCTCTTATGAGC...TCCCTTCCAGCTGGTGAGAGGAGGAGTTAGAGCTGGTCGTTTTGTGATTACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAACTAGACCTTGAGCTTTaGTTCCTCATTGGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQLDLEL*FLIGSG
Trigger: CCCACTGCCAATGAGGAACAAAAGCTCAAGGTCTAG...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp TCCCCACAACAGACTGTGTTTTATCAGACACTCAGAGGAAAGTGGCATCTGTCCCAACAACTGTATGGCTaGCTCAGTGCTCTGTTTGTC +
Preference number: 5 (lower is better)
Translates to: SPQQTVFYQTLRGKWHLSQQLYG*LSALFV
Trigger: GACAAACAGAGCACTGAGCAAGCCATACAGTTGTTG...GGACAGATGCCACTTTCCTCTGAGTGTCTGATAAAACACAGTCTGTTGTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp TCCCCACAACAGACTGTGTTTTATCAGACACTCAGAGGAAAGTGGCATCTGTCCTCCAGCTTAGTGGGGTaGGGGAAAGGTTATATGAAG +
Preference number: 5 (lower is better)
Translates to: SPQQTVFYQTLRGKWHLSSSLVG*GKGYMK
Trigger: CTTCATATAACCTTTCCCCAACCCCACTAAGCTGGA...GGACAGATGCCACTTTCCTCTGAGTGTCTGATAAAACACAGTCTGTTGTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp GAGCCAGTTTATCAGGCAGCATTTGAGGTAAGGAATGTCCGTCTCTGGGACCCTTTCACTATCCCCATATaGGCATTAAAGAGAGCCAGT +
Preference number: 5 (lower is better)
Translates to: EPVYQAAFEVRNVRLWDPFTIPI*ALKRAS
Trigger: ACTGGCTCTCTTTAATGCCAATATGGGGATAGTGAA...AGGGTCCCAGAGACGGACATTCCTTACCTCAAATGCTGCCTGATAAACTGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428056.6
CDS CCA 90 bp GTCAGGTCAAGTTCCACCTCCAGCTTCCAATTGTGTAAATCTGAGTaGGCCAAGACTTTGCATTTCCAACAAGCCCTCCCAGAAATTCTA +
Preference number: 5 (lower is better)
Translates to: VRSSSTSSFQLCKSE*AKTLHFQQALPEIL
Trigger: TAGAATTTCTGGGAGGGCTTGTTGGAAATGCAAAGTCTTGGCCCACTCAGATTTACACAATTGGAAGCTGGAGGTGGAACTTGACCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466019.1
CDS-3UTR CAA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTCACAAGGTCCATGGATaGCCTGCCTGGCTCCATCAA +
Preference number: 5 (lower is better)
Translates to: DKDYHLESRIKQGHPLVIHKVHG*PAWLHQ
Trigger: TTGATGGAGCCAGGCAGGCAATCCATGGACCTTGTG...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAAGATGTTTTTGACAACTaGGCACTGAGAGACTATCCT +
Preference number: 5 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKDVFDN*ALRDYP
Trigger: AGGATAGTCTCTCAGTGCCAAGTTGTCAAAAACATC...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAAGACTCGAACAGATATTaGTACATCCTTGTTGACAGC +
Preference number: 5 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKDSNRY*YILVDS
Trigger: GCTGTCAACAAGGATGTACAAATATCTGTTCGAGTC...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAATCATCTGGAACCAACTaGTCGGTTTGTTCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: DVKATTDSPLCLKFSCAESSGTN*SVCSLP
Trigger: TGGGAGAGAACAAACCGACAAGTTGGTTCCAGATGA...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS TCA 90 bp AGCAGGATTATGCTGAGCCCTGGCCTACTTATACTTTCTGGTAGATaGAGTCTTCAGTCTGAAACCTGTGGAACTTTGGTCCTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: SRIMLSPGLLILSGR*SLQSETCGTLVLLK
Trigger: TTTCAGGAGGACCAAAGTTCCACAGGTTTCAGACTGAAGACTTCATCTACCAGAAAGTATAAGTAGGCCAGGGCTCAGCATAATCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR CAA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGCCAGTTGGTCAATATTaGGGGACCTCACCAGCTTAT +
Preference number: 5 (lower is better)
Translates to: TGCIVKATVNMMTATTRMPVGQY*GTSPAY
Trigger: ATAAGCTGGTGAGGTCCCCAAATATTGACCAACTGG...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGCCTCCAGATAAGTCTTaGTGGGGCAAATGCAGGATA +
Preference number: 5 (lower is better)
Translates to: TGCIVKATVNMMTATTRMPPDKS*WGKCRI
Trigger: TATCCTGCATTTGCCCCACAAAGACTTATCTGGAGG...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGTATTCAATGTCCAGATaGGGGAGGGGTCTGTGTGTT +
Preference number: 5 (lower is better)
Translates to: TGCIVKATVNMMTATTRMYSMSR*GRGLCV
Trigger: AACACACAGACCCCTCCCCAATCTGGACATTGAATA...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp AACAGCAAAGAAAAAGCTGAGGGAAACCATCGACCAAAGCAAGCGGAGGCTCAAAAACAAGGGCATCCTTaGGTGATTAGCACCATACAT +
Preference number: 5 (lower is better)
Translates to: NSKEKAEGNHRPKQAEAQKQGHP*VISTIH
Trigger: ATGTATGGTGCTAATCACCAAAGGATGCCCTTGTTT...TTGAGCCTCCGCTTGCTTTGGTCGATGGTTTCCCTCAGCTTTTTCTTTGCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp ATCGACCAAAGCAAGCGGAGGCTCAAAAGAGAGACGAGCTTCAGGATCAGGAAATATTCTCAGGCCAAATaGTTGATGCATGTTTGGATT +
Preference number: 5 (lower is better)
Translates to: IDQSKRRLKRETSFRIRKYSQAK*LMHVWI
Trigger: AATCCAAACATGCATCAACAATTTGGCCTGAGAATA...TTTCCTGATCCTGAAGCTCGTCTCTCTTTTGAGCCTCCGCTTGCTTTGGTCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS-3UTR CAA 90 bp GATGTGAAGGCAACAACTGACAGTCCTCTCTGCTTGAAGTTCTCATGTGCAGAATCTCAGGCCAAATTGTaGATGCATGTTTGGATTAAC +
Preference number: 5 (lower is better)
Translates to: DVKATTDSPLCLKFSCAESQAKL*MHVWIN
Trigger: GTTAATCCAAACATGCATCAACAATTTGGCCTGAGA...TTCTGCACATGAGAACTTCAAGCAGAGAGGACTGTCAGTTGTTGCCTTCACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS TCA 90 bp AGTCAAGAGAAAAGATATACATCTAGCCTTCCAGCAGGATTATGCTaGGCCCTGGCCTACTTATACTTTCTGGTAGATGAAGTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: SQEKRYTSSLPAGLC*ALAYLYFLVDEVFS
Trigger: ACTGAAGACTTCATCTACCAGAAAGTATAAGTAGGCCAGGGCTCAGCATAATCCTGCTGGAAGGCTAGATGTATATCTTTTCTCTTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS-3UTR CAA 90 bp ACAGGCTGTATTGTAAAAGCCACAGTGAACATGATGACAGCAACAACGAGGATGTCAAAATTGCTGTATTaGGCCCATTCTCCATGTTCA +
Preference number: 5 (lower is better)
Translates to: TGCIVKATVNMMTATTRMSKLLY*AHSPCS
Trigger: TGAACATGGAGAATGGGCCAAATACAGCAATTTTGA...CATCCTCGTTGTTGCTGTCATCATGTTCACTGTGGCTTTTACAATACAGCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS TCA 90 bp CCCACACAGTATACCTATAGTCTATGGTGCGTATGGAATAGCCCATaGTCTTTATATCTTTTAAACTCGGCTTGTCAGAATTCCACTGAG +
Preference number: 5 (lower is better)
Translates to: PTQYTYSLWCVWNSP*SLYLLNSACQNSTE
Trigger: CTCAGTGGAATTCTGACAAGCCGAGTTTAAAAGATATAAAGATCATGGGCTATTCCATACGCACCATAGACTATAGGTATACTGTGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS CCA 90 bp CTCCATCTTAGTGTTTTCATACTTCTCAGAGGAAGGATGATAAGGTaGAAAAGACCAGCTATACGGAGAATCATCGGTATGGTTAGAAGA +
Preference number: 5 (lower is better)
Translates to: LHLSVFILLRGRMIR*KRPAIRRIIGMVRR
Trigger: TCTTCTAACCATACCGATGATTCTCCGTATAGCTGGTCTTTTCCACCTTATCATCCTTCCTCTGAGAAGTATGAAAACACTAAGATGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490775.5
CDS-3UTR CAA 90 bp GATAAGGACTATCACCTAGAATCCAGAATCAAACAAGGGCATCCTTTGGTGATTACTAAACGAAAAGGTTaGGCTGTTACATATTCTCAG +
Preference number: 5 (lower is better)
Translates to: DKDYHLESRIKQGHPLVITKRKG*AVTYSQ
Trigger: CTGAGAATATGTAACAGCCAAACCTTTTCGTTTAGT...AATCACCAAAGGATGCCCTTGTTTGATTCTGGATTCTAGGTGATAGTCCTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS GCA 72 bp GCCACAGAGACCTCCTCGTCGGGAACCCATGAAGACTaGGCAACACAGCCGCCGCCCGGGCCCGCAGGCCCG +
Preference number: 6 (lower is better)
Translates to: ATETSSSGTHED*ATQPPPGPAGP
Trigger: CGGGCCTGCGGGCCCGGGCGGCGGCTGTGTTGCGCAGTCTTCATGGGTTCCCGACGAGGAGGTCTCTGTGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340855.11
ENST00000370441.8
ENST00000466323.5
CDS GCA 72 bp AGAAGAACGTTCAGAGCATCTGTGGTCGAGTTGGCCTaGGTTTCGGATCCGAGGGCGACGCAGACGGAGCTC +
Preference number: 6 (lower is better)
Translates to: RRTFRASVVELA*VSDPRATQTEL
Trigger: GAGCTCCGTCTGCGTCGCCCTCGGATCCGAAACGCAGGCCAACTCGACCACAGATGCTCTGAACGTTCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340855.11
ENST00000370441.8
ENST00000428056.6
ENST00000466323.5
ENST00000521702.1
CDS CAA 90 bp AAGGTGCCCTCGGGAACATCCAGCACATCCACAGGGCAAAGCAGGTaGGCATGGAGTTCTCCATCTGGCCCTCGACATGTCTGTAATCCC +
Preference number: 6 (lower is better)
Translates to: KVPSGTSSTSTGQSR*AWSSPSGPRHVCNP
Trigger: GGGATTACAGACATGTCGAGGGCCAGATGGAGAACTCCATGCCAACCTGCTTTGCCCTGTGGATGTGCTGGATGTTCCCGAGGGCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490775.5
CDS TCA 72 bp GAGGTAAGGGAAAAGCTTCTCGCCTGCCTCCGGAAGTaGAGCCGTCCTTCCAGGAACATAGAATATCAGGGG +
Preference number: 6 (lower is better)
Translates to: EVREKLLACLRK*SRPSRNIEYQG
Trigger: CCCCTGATATTCTATGTTCCTGGAAGGACGGCTTCACTTCCGGAGGCAGGCGAGAAGCTTTTCCCTTACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS TCA 72 bp TTCAGAAGGTTCTTGCCTTCTCTGCACAGCTCAACGTaGAATGAAGGAACGGGGCAGCGAGGTGGAACCTGC +
Preference number: 6 (lower is better)
Translates to: FRRFLPSLHSST*NEGTGQRGGTC
Trigger: GCAGGTTCCACCTCGCTGCCCCGTTCCTTCATTTCACGTTGAGCTGTGCAGAGAAGGCAAGAACCTTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS TCA 72 bp AAGGTCCATGGATTGCCTGCCTGGCTCCATCAACTGTaGGGCGGAATCAAAAGGGTCGAGGTAAGGGAAAAG +
Preference number: 6 (lower is better)
Translates to: KVHGLPAWLHQL*GGIKRVEVREK
Trigger: CTTTTCCCTTACCTCGACCCTTTTGATTCCGCCTCACAGTTGATGGAGCCAGGCAGGCAATCCATGGACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS CCA 72 bp ACATCCAGCACATCCACAGGGCAAAGCAGGTTGGCATaGAGTTCTCCATCTGGCCCTCGACATGTCTGTAAT +
Preference number: 6 (lower is better)
Translates to: TSSTSTGQSRLA*SSPSGPRHVCN
Trigger: ATTACAGACATGTCGAGGGCCAGATGGAGAACTCCATGCCAACCTGCTTTGCCCTGTGGATGTGCTGGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490775.5
CDS CAA 90 bp CCTCTCACCAGCTGGAAGGGAGCACATCACATTTGCCATCCATGGTaGGCAAAACTCAAGGCATCAACAACTGGAAAAGATCTCCACCTT +
Preference number: 6 (lower is better)
Translates to: PLTSWKGAHHICHPW*AKLKASTTGKDLHL
Trigger: AAGGTGGAGATCTTTTCCAGTTGTTGATGCCTTGAGTTTTGCCAACCATGGATGGCAAATGTGATGTGCTCCCTTCCAGCTGGTGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS CAA 90 bp AGCTCTAACTCCTCCTCTCACCAGCTGGAAGGGAGCACATCACATTaGCCATCCATGGTTGGCAAAACTCAAGGCATCAACAACTGGAAA +
Preference number: 6 (lower is better)
Translates to: SSNSSSHQLEGSTSH*PSMVGKTQGINNWK
Trigger: TTTCCAGTTGTTGATGCCTTGAGTTTTGCCAACCATGGATGGCAAATGTGATGTGCTCCCTTCCAGCTGGTGAGAGGAGGAGTTAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS GCA 72 bp AGGTACGGATCCTCTTCCAAGTCACGGAATCGAAAATaGTTCAGAAGGTTCTTGCCTTCTCTGCACAGCTCA +
Preference number: 6 (lower is better)
Translates to: RYGSSSKSRNRK*FRRFLPSLHSS
Trigger: TGAGCTGTGCAGAGAAGGCAAGAACCTTCTGAAGCATTTTCGATTCCGTGACTTGGAAGAGGATCCGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS CCA 72 bp AGTTCCACCTCCAGCTTCCAATTGTGTAAATCTGAGTaGGCCAAGACTTTGCATTTCCAACAAGCCCTCCCA +
Preference number: 6 (lower is better)
Translates to: SSTSSFQLCKSE*AKTLHFQQALP
Trigger: TGGGAGGGCTTGTTGGAAATGCAAAGTCTTGGCCCACTCAGATTTACACAATTGGAAGCTGGAGGTGGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466019.1
CDS CAA 72 bp AGGGGAACATGGGTAGCAACATCAAAATTGCTGTATTaGGCCCATTCTCCATGTTCACCTAGAGCCCACCCA +
Preference number: 6 (lower is better)
Translates to: RGTWVATSKLLY*AHSPCSPRAHP
Trigger: TGGGTGGGCTCTAGGTGAACATGGAGAATGGGCCAAATACAGCAATTTTGATGTTGCTACCCATGTTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS CCA 72 bp ACCAGCTGGAAGGGAGCACATCACATTTGCCATCCATaGTTGGCAAAACTCAAGGCATCAACAACTGGAAAA +
Preference number: 6 (lower is better)
Translates to: TSWKGAHHICHP*LAKLKASTTGK
Trigger: TTTTCCAGTTGTTGATGCCTTGAGTTTTGCCAACCATGGATGGCAAATGTGATGTGCTCCCTTCCAGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS CAA 72 bp TCGGTTGTCAGGTCAAGTTCCACCTCCAGCTTCCAATaGTGTAAATCTGAGTGGGCCAAGACTTTGCATTTC +
Preference number: 6 (lower is better)
Translates to: SVVRSSSTSSFQ*CKSEWAKTLHF
Trigger: GAAATGCAAAGTCTTGGCCCACTCAGATTTACACAATTGGAAGCTGGAGGTGGAACTTGACCTGACAACCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466019.1
CDS GCA 72 bp CCAAGTCACGGAATCGAAAATGCTTCAGAAGGTTCTTaGCTTCTCTGCACAGCTCAACGTGAAATGAAGGAA +
Preference number: 6 (lower is better)
Translates to: PSHGIENASEGS*LLCTAQREMKE
Trigger: TTCCTTCATTTCACGTTGAGCTGTGCAGAGAAGGCAAGAACCTTCTGAAGCATTTTCGATTCCGTGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS CAA 72 bp AGCTTCCAATTGTGTAAATCTGAGTGGGCCAAGACTTaGCATTTCCAACAAGCCCTCCCAGAAATTCTAAGG +
Preference number: 6 (lower is better)
Translates to: SFQLCKSEWAKT*HFQQALPEILR
Trigger: CCTTAGAATTTCTGGGAGGGCTTGTTGGAAATGCAAAGTCTTGGCCCACTCAGATTTACACAATTGGAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466019.1
CDS CAA 90 bp GGTTGGCAAAACTCAAGGCATCAACAACTGGAAAAGATCTCCACCTaGGGAATCATTATACATATTGTGATCCTGCAATGGGTCAGAATC +
Preference number: 6 (lower is better)
Translates to: GWQNSRHQQLEKIST*GIIIHIVILQWVRI
Trigger: GATTCTGACCCATTGCAGGATCACAATATGTATAATGATTCCCAAGGTGGAGATCTTTTCCAGTTGTTGATGCCTTGAGTTTTGCCAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS TCA 72 bp AAAAGATATACATCTAGCCTTCCAGCAGGATTATGCTaGGCCCTGGCCTACTTATACTTTCTGGTAGATGAA +
Preference number: 6 (lower is better)
Translates to: KRYTSSLPAGLC*ALAYLYFLVDE
Trigger: TTCATCTACCAGAAAGTATAAGTAGGCCAGGGCTCAGCATAATCCTGCTGGAAGGCTAGATGTATATCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466323.5
CDS CAA 72 bp AACTCAAGGCATCAACAACTGGAAAAGATCTCCACCTaGGGAATCATTATACATATTGTGATCCTGCAATGG +
Preference number: 6 (lower is better)
Translates to: NSRHQQLEKIST*GIIIHIVILQW
Trigger: CCATTGCAGGATCACAATATGTATAATGATTCCCAAGGTGGAGATCTTTTCCAGTTGTTGATGCCTTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS TCA 72 bp AAAAGATCTCCACCTTGGGAATCATTATACATATTGTaGTCCTGCAATGGGTCAGAATCCACAAAATACAGT +
Preference number: 6 (lower is better)
Translates to: KRSPPWESLYIL*SCNGSESTKYS
Trigger: ACTGTATTTTGTGGATTCTGACCCATTGCAGGATCACAATATGTATAATGATTCCCAAGGTGGAGATCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340855.11
CDS TCA 72 bp TATACCTATAGTCTATGGTGCGTATGGAATAGCCCATaGTCTTTATATCTTTTAAACTCGGCTTGTCAGAAT +
Preference number: 6 (lower is better)
Translates to: YTYSLWCVWNSP*SLYLLNSACQN
Trigger: ATTCTGACAAGCCGAGTTTAAAAGATATAAAGATCATGGGCTATTCCATACGCACCATAGACTATAGGTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340855.11