RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IDO1 (Homo sapiens)

Ensembl gene IDs: ENSG00000131203

Ensembl transcript IDs: ENST00000253513.11, ENST00000518237.6, ENST00000518804.5, ENST00000519154.5, ENST00000521480.1, ENST00000521636.1, ENST00000522495.5, ENST00000522840.1

Found 258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTCCACCAGCAGTCTGCTGGATGCCCAGCAGGACGTCAAAGCACTaGAAGACGCTGCTTTGGCCTGCACTGCCCCCTGCAAACTCCTTT +
Preference number: 1 (lower is better)
Translates to: PPPAVCWMPSRTSKH*KTLLWPALPPANSF
Trigger: AAAGGAGTTTGCAGGGGGCAGTGCAGGCCAAAGCAGCGTCTTTCAGTGCTTTGACGTCCTGCTGGGCATCCAGCAGACTGCTGGTGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR GCA 90 bp CAGTCTGCTGGATGCCCAGCAGGACGTCAAAGCACTGAAAGACGCTaGTTTGGCCTGCACTGCCCCCTGCAAACTCCTTTGGGTCTTCCC +
Preference number: 1 (lower is better)
Translates to: QSAGCPAGRQSTERR*FGLHCPLQTPLGLP
Trigger: GGGAAGACCCAAAGGAGTTTGCAGGGGGCAGTGCAGGCCAAAGCAGCGTCTTTCAGTGCTTTGACGTCCTGCTGGGCATCCAGCAGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR GCA 90 bp GATGCCCAGCAGGACGTCAAAGCACTGAAAGACGCTGCTTTGGCCTaGACTGCCCCCTGCAAACTCCTTTGGGTCTTCCCAGAACCCTTC +
Preference number: 1 (lower is better)
Translates to: DAQQDVKALKDAALA*TAPCKLLWVFPEPF
Trigger: GAAGGGTTCTGGGAAGACCCAAAGGAGTTTGCAGGGGGCAGTGCAGGCCAAAGCAGCGTCTTTCAGTGCTTTGACGTCCTGCTGGGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR GCA 90 bp GACGTCAAAGCACTGAAAGACGCTGCTTTGGCCTGCACTGCCCCCTaGAAACTCCTTTGGGTCTTCCCAGAACCCTTCATACACCAGACC +
Preference number: 1 (lower is better)
Translates to: DVKALKDAALACTAP*KLLWVFPEPFIHQT
Trigger: GGTCTGGTGTATGAAGGGTTCTGGGAAGACCCAAAGGAGTTTGCAGGGGGCAGTGCAGGCCAAAGCAGCGTCTTTCAGTGCTTTGACGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR GCA 90 bp GCTTCCAGTTTTGAAGGGTCTTCAGAGGTCTTATTCTCCTTTGGCTaGTGGCTTGCAGGAATCAGGATGTACTTAGTCACGATTTGCAGA +
Preference number: 1 (lower is better)
Translates to: ASSFEGSSEVLFSFG*WLAGIRMYLVTICR
Trigger: TCTGCAAATCGTGACTAAGTACATCCTGATTCCTGCAAGCCAGCAGCCAAAGGAGAATAAGACCTCTGAAGACCCTTCAAAACTGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR CCA 90 bp TCCAGTTTTGAAGGGTCTTCAGAGGTCTTATTCTCCTTTGGCTGCTaGCTTGCAGGAATCAGGATGTACTTAGTCACGATTTGCAGATGG +
Preference number: 1 (lower is better)
Translates to: SSFEGSSEVLFSFGC*LAGIRMYLVTICRW
Trigger: CCATCTGCAAATCGTGACTAAGTACATCCTGATTCCTGCAAGCCAGCAGCCAAAGGAGAATAAGACCTCTGAAGACCCTTCAAAACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR GCA 90 bp GCTATTTCCAACAGCGCCTTTAGCAAAGTGTCCCGTTCTTGCATTTaGATTGCCTTGAATACAGTAGGAATTACTTTGATTGCAGAAGCA +
Preference number: 1 (lower is better)
Translates to: AISNSAFSKVSRSCI*IALNTVGITLIAEA
Trigger: TGCTTCTGCAATCAAAGTAATTCCTACTGTATTCAAGGCAATGCAAATGCAAGAACGGGACACTTTGCTAAAGGCGCTGTTGGAAATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR GCA 90 bp CAAGAAGCTATTTCCAACAGCGCCTTTAGCAAAGTGTCCCGTTCTTaGATTTGCATTGCCTTGAATACAGTAGGAATTACTTTGATTGCA +
Preference number: 1 (lower is better)
Translates to: QEAISNSAFSKVSRS*ICIALNTVGITLIA
Trigger: TGCAATCAAAGTAATTCCTACTGTATTCAAGGCAATGCAAATGCAAGAACGGGACACTTTGCTAAAGGCGCTGTTGGAAATAGCTTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR GCA 90 bp GGCTCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTaGTATGATAAAATGTGCTCTTGTTGGGTTACATTAACCTTCCTT +
Preference number: 1 (lower is better)
Translates to: GSVTMGNDRNAYRCL*YDKMCSCWVTLTFL
Trigger: AAGGAAGGTTAATGTAACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR CAA 90 bp CTGCTGGATGCCCAGCAGGACGTCAAAGCACTGAAAGACGCTGCTTaGGCCTGCACTGCCCCCTGCAAACTCCTTTGGGTCTTCCCAGAA +
Preference number: 2 (lower is better)
Translates to: LLDAQQDVKALKDAA*ACTAPCKLLWVFPE
Trigger: TTCTGGGAAGACCCAAAGGAGTTTGCAGGGGGCAGTGCAGGCCAAAGCAGCGTCTTTCAGTGCTTTGACGTCCTGCTGGGCATCCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR-3UTR GCA 90 bp GCAGATGGTAGCTCCTCAGGGAGACCAGAGCTTTCACACAGGCGTCATAAGCTTAGCACTGAAAGACGCTaGTTTGGCCTGCACTGCCCC +
Preference number: 2 (lower is better)
Translates to: ADGSSSGRPELSHRRHKLSTERR*FGLHCP
Trigger: GGGGCAGTGCAGGCCAAAGCAGCGTCTTTCAGTGCT...AAGCTTATGACGCCTGTGTGAAAGCTCTGGTCTCCCTGAGGAGCTACCATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR CAA 90 bp ACTGAAAGACGCTGCTTTGGCCTGCACTGCCCCCTGCAAACTCCTTaGGGTCTTCCCAGAACCCTTCATACACCAGACCGTCTGATAGCT +
Preference number: 2 (lower is better)
Translates to: TERRCFGLHCPLQTP*GLPRTLHTPDRLIA
Trigger: AGCTATCAGACGGTCTGGTGTATGAAGGGTTCTGGGAAGACCCAAAGGAGTTTGCAGGGGGCAGTGCAGGCCAAAGCAGCGTCTTTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR-3UTR TCA 90 bp AGCTCCTCAGGGAGACCAGAGCTTTCACACAGGCGTCATAAGCTTCCCGCAGGCCACAGGAAGTTCCTGTaGGCTGGTGGCATATATCTT +
Preference number: 2 (lower is better)
Translates to: SSSGRPELSHRRHKLPAGHRKFL*AGGIYL
Trigger: AAGATATATGCCACCAGCTCACAGGAACTTCCTGTG...GCCTGCGGGAAGCTTATGACGCCTGTGTGAAAGCTCTGGTCTCCCTGAGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR CAA 90 bp CTTTGGCTGCTGGCTTGCAGGAATCAGGATGTACTTAGTCACGATTaGCAGATGGTAGCTCCTCAGGGAGACCAGAGCTTTCACACAGGC +
Preference number: 2 (lower is better)
Translates to: LWLLACRNQDVLSHD*QMVAPQGDQSFHTG
Trigger: GCCTGTGTGAAAGCTCTGGTCTCCCTGAGGAGCTACCATCTGCAAATCGTGACTAAGTACATCCTGATTCCTGCAAGCCAGCAGCCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR-3UTR GCA 90 bp CTTTGGCTTCCAGTTTTGAAGGGTCTTCAGAGGTCTTATTCTCCTTTGGCTGCTCAGCAGTCTGCTGGATaGCCAGCAGGACGTCAAAGC +
Preference number: 2 (lower is better)
Translates to: LWLPVLKGLQRSYSPLAAQQSAG*PAGRQS
Trigger: GCTTTGACGTCCTGCTGGGCATCCAGCAGACTGCTG...AGCAGCCAAAGGAGAATAAGACCTCTGAAGACCCTTCAAAACTGGAAGCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR CAA 90 bp CTTTCACACAGGCGTCATAAGCTTCCCGCAGGCCAGCATCACCTTTaGAAAGGACAAACTCACGGACTGAGGGATTTGACTCTAATGAGC +
Preference number: 2 (lower is better)
Translates to: LSHRRHKLPAGQHHL*KGQTHGLRDLTLMS
Trigger: GCTCATTAGAGTCAAATCCCTCAGTCCGTGAGTTTGTCCTTTCAAAAGGTGATGCTGGCCTGCGGGAAGCTTATGACGCCTGTGTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR-3UTR TCA 90 bp GCTTCCAGTTTTGAAGGGTCTTCAGAGGTCTTATTCTCCTTTGGCTGCTGGCTTAGGACGTCAAAGCACTaGAAGACGCTGCTTTGGCCT +
Preference number: 2 (lower is better)
Translates to: ASSFEGSSEVLFSFGCWLRTSKH*KTLLWP
Trigger: AGGCCAAAGCAGCGTCTTTCAGTGCTTTGACGTCCT...AAGCCAGCAGCCAAAGGAGAATAAGACCTCTGAAGACCCTTCAAAACTGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR-3UTR TCA 90 bp CTTTGGCTTCCAGTTTTGAAGGGTCTTCAGAGGTCTTATTCTCCTTTGGCTGCTATGTCCTGGAGGAACTaGGCAGCATGTCCTCCACCA +
Preference number: 2 (lower is better)
Translates to: LWLPVLKGLQRSYSPLAAMSWRN*AACPPP
Trigger: TGGTGGAGGACATGCTGCTCAGTTCCTCCAGGACAT...AGCAGCCAAAGGAGAATAAGACCTCTGAAGACCCTTCAAAACTGGAAGCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR-3UTR CCA 90 bp AAGCTTCCCGCAGGCCAGCATCACCTTTTGAAAGGACAAACTCACGGACTGAGGGAAGTTCCTGTGAGCTaGTGGCATATATCTTCTCAT +
Preference number: 2 (lower is better)
Translates to: KLPAGQHHLLKGQTHGLREVPVS*WHISSH
Trigger: ATGAGAAGATATATGCCACCAGCTCACAGGAACTTC...CCTCAGTCCGTGAGTTTGTCCTTTCAAAAGGTGATGCTGGCCTGCGGGAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR-3UTR CCA 90 bp TGGCTTCCAGTTTTGAAGGGTCTTCAGAGGTCTTATTCTCCTTTGGCTGCTGGCGTTCCTGTGAGCTGGTaGCATATATCTTCTCATGTC +
Preference number: 2 (lower is better)
Translates to: WLPVLKGLQRSYSPLAAGVPVSW*HISSHV
Trigger: GACATGAGAAGATATATGCCACCAGCTCACAGGAAC...GCCAGCAGCCAAAGGAGAATAAGACCTCTGAAGACCCTTCAAAACTGGAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR CAA 90 bp GGAAATTCATTAAATCAGTGCCTCCAGTTCCTTTGGCTTCCAGTTTaGAAGGGTCTTCAGAGGTCTTATTCTCCTTTGGCTGCTGGCTTG +
Preference number: 2 (lower is better)
Translates to: GNSLNQCLQFLWLPV*KGLQRSYSPLAAGL
Trigger: CAAGCCAGCAGCCAAAGGAGAATAAGACCTCTGAAGACCCTTCAAAACTGGAAGCCAAAGGAACTGGAGGCACTGATTTAATGAATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR-3UTR CCA 90 bp GACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTTTCTCCTTTGGCTGCTaGCTTGCAGGAATCAGGATG +
Preference number: 2 (lower is better)
Translates to: DRNAYRCLCYDKMCSCWVFSFGC*LAGIRM
Trigger: CATCCTGATTCCTGCAAGCCAGCAGCCAAAGGAGAA...AACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR-3UTR GCA 90 bp AGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTACATTATTCTCCTTTGGCTaGTGGCTTGCAGGAATCAGG +
Preference number: 2 (lower is better)
Translates to: RNAYRCLCYDKMCSCWVTLFSFG*WLAGIR
Trigger: CCTGATTCCTGCAAGCCAGCAGCCAAAGGAGAATAA...TGTAACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR-3UTR GCA 90 bp TGGGTTCACATGATTTGCCGTGGATTTGGTGAAACACTTGAAGGGCTTTCTCCATTCTTGCATTTGCATTaGCTTGAATACAGTAGGAAT +
Preference number: 2 (lower is better)
Translates to: WVHMICRGFGETLEGLSPFLHLH*LEYSRN
Trigger: ATTCCTACTGTATTCAAGGCAATGCAAATGCAAGAA...TGGAGAAAGCCCTTCAAGTGTTTCACCAAATCCACGGCAAATCATGTGAACCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR TCA 72 bp GCAGTCTGCTGGATGCCCAGCAGGACGTCAAAGCACTaGAAGACGCTGCTTTGGCCTGCACTGCCCCCTGCA +
Preference number: 3 (lower is better)
Translates to: AVCWMPSRTSKH*KTLLWPALPPA
Trigger: TGCAGGGGGCAGTGCAGGCCAAAGCAGCGTCTTTCAGTGCTTTGACGTCCTGCTGGGCATCCAGCAGACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR GCA 72 bp GGATGCCCAGCAGGACGTCAAAGCACTGAAAGACGCTaGTTTGGCCTGCACTGCCCCCTGCAAACTCCTTTG +
Preference number: 3 (lower is better)
Translates to: GCPAGRQSTERR*FGLHCPLQTPL
Trigger: CAAAGGAGTTTGCAGGGGGCAGTGCAGGCCAAAGCAGCGTCTTTCAGTGCTTTGACGTCCTGCTGGGCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR-3UTR CAA 90 bp GATGCCCAGCAGGACGTCAAAGCACTGAAAGACGCTGCTTTGGCCTGCACTGCCTCTGATAGCTGGGGGTaGCCTTTCCAGCCAGACAAA +
Preference number: 3 (lower is better)
Translates to: DAQQDVKALKDAALACTASDSWG*PFQPDK
Trigger: TTTGTCTGGCTGGAAAGGCAACCCCCAGCTATCAGA...GGCAGTGCAGGCCAAAGCAGCGTCTTTCAGTGCTTTGACGTCCTGCTGGGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR GCA 72 bp GCACTGAAAGACGCTGCTTTGGCCTGCACTGCCCCCTaGAAACTCCTTTGGGTCTTCCCAGAACCCTTCATA +
Preference number: 3 (lower is better)
Translates to: ALKDAALACTAP*KLLWVFPEPFI
Trigger: TATGAAGGGTTCTGGGAAGACCCAAAGGAGTTTGCAGGGGGCAGTGCAGGCCAAAGCAGCGTCTTTCAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR-3UTR CAA 90 bp GCAGATGGTAGCTCCTCAGGGAGACCAGAGCTTTCACACAGGCGTCATAAGCTTCCCCTGCAAACTCCTTaGGGTCTTCCCAGAACCCTT +
Preference number: 3 (lower is better)
Translates to: ADGSSSGRPELSHRRHKLPLQTP*GLPRTL
Trigger: AAGGGTTCTGGGAAGACCCAAAGGAGTTTGCAGGGG...AAGCTTATGACGCCTGTGTGAAAGCTCTGGTCTCCCTGAGGAGCTACCATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR-3UTR CAA 90 bp GCTTCCAGTTTTGAAGGGTCTTCAGAGGTCTTATTCTCCTTTGGCTGCTGGCTTCTGAAAGACGCTGCTTaGGCCTGCACTGCCCCCTGC +
Preference number: 3 (lower is better)
Translates to: ASSFEGSSEVLFSFGCWLLKDAA*ACTAPC
Trigger: GCAGGGGGCAGTGCAGGCCAAAGCAGCGTCTTTCAG...AAGCCAGCAGCCAAAGGAGAATAAGACCTCTGAAGACCCTTCAAAACTGGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR TCA 72 bp GCTGGTGGCATATATCTTCTCATGTCCTGGAGGAACTaGGCAGCATGTCCTCCACCAGCAGTCTGCTGGATG +
Preference number: 3 (lower is better)
Translates to: AGGIYLLMSWRN*AACPPPAVCWM
Trigger: CATCCAGCAGACTGCTGGTGGAGGACATGCTGCTCAGTTCCTCCAGGACATGAGAAGATATATGCCACCAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR-3UTR CAA 90 bp CCTGTGAGCTGGTGGCATATATCTTCTCATGTCCTGGAGGAACTGAGCAGCATGCAAAGTGTCCCGTTCTaGCATTTGCATTGCCTTGAA +
Preference number: 3 (lower is better)
Translates to: PVSWWHISSHVLEELSSMQSVPF*HLHCLE
Trigger: TTCAAGGCAATGCAAATGCAAGAACGGGACACTTTG...CATGCTGCTCAGTTCCTCCAGGACATGAGAAGATATATGCCACCAGCTCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR TCA 72 bp GAGGGATTTGACTCTAATGAGCACAGGAAGTTCCTGTaGGCTGGTGGCATATATCTTCTCATGTCCTGGAGG +
Preference number: 3 (lower is better)
Translates to: EGFDSNEHRKFL*AGGIYLLMSWR
Trigger: CCTCCAGGACATGAGAAGATATATGCCACCAGCTCACAGGAACTTCCTGTGCTCATTAGAGTCAAATCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR GCA 72 bp GTCTTCAGAGGTCTTATTCTCCTTTGGCTGCTGGCTTaGAGGAATCAGGATGTACTTAGTCACGATTTGCAG +
Preference number: 3 (lower is better)
Translates to: VFRGLILLWLLA*RNQDVLSHDLQ
Trigger: CTGCAAATCGTGACTAAGTACATCCTGATTCCTGCAAGCCAGCAGCCAAAGGAGAATAAGACCTCTGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR GCA 72 bp TTTGAAGGGTCTTCAGAGGTCTTATTCTCCTTTGGCTaGTGGCTTGCAGGAATCAGGATGTACTTAGTCACG +
Preference number: 3 (lower is better)
Translates to: FEGSSEVLFSFG*WLAGIRMYLVT
Trigger: CGTGACTAAGTACATCCTGATTCCTGCAAGCCAGCAGCCAAAGGAGAATAAGACCTCTGAAGACCCTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR CCA 72 bp GAAGGGTCTTCAGAGGTCTTATTCTCCTTTGGCTGCTaGCTTGCAGGAATCAGGATGTACTTAGTCACGATT +
Preference number: 3 (lower is better)
Translates to: EGSSEVLFSFGC*LAGIRMYLVTI
Trigger: AATCGTGACTAAGTACATCCTGATTCCTGCAAGCCAGCAGCCAAAGGAGAATAAGACCTCTGAAGACCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR-3UTR CAA 90 bp TGCCGTGGATTTGGTGAAACACTTGAAGGGCTTTCTCCAAGCAAGAAGCTATTTGTCCCGTTCTTGCATTaGCATTGCCTTGAATACAGT +
Preference number: 3 (lower is better)
Translates to: CRGFGETLEGLSPSKKLFVPFLH*HCLEYS
Trigger: ACTGTATTCAAGGCAATGCAAATGCAAGAACGGGAC...AAATAGCTTCTTGCTTGGAGAAAGCCCTTCAAGTGTTTCACCAAATCCACGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR-3UTR CAA 90 bp GTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCAAAGGGATTTCTCAGTaGTACTTCTTACAGTCTTCA +
Preference number: 3 (lower is better)
Translates to: VCGSVTMGNDRNAYRCLCKGISQ*YFLQSS
Trigger: TGAAGACTGTAAGAAGTACAACTGAGAAATCCCTTT...GCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGAGCCACAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR-3UTR CAA 90 bp AAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATGTACTTAGTCACGATTaGCAGATGGTAGCTCCTCAG +
Preference number: 3 (lower is better)
Translates to: KHCIVLVCGSVTMGNDRNVLSHD*QMVAPQ
Trigger: CTGAGGAGCTACCATCTGCAAATCGTGACTAAGTAC...ATTCCTGTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR GCA 72 bp ACAATGGGTAATGACAGGAATGCATACAGATGTCTCTaGTATGATAAAATGTGCTCTTGTTGGGTTACATTA +
Preference number: 3 (lower is better)
Translates to: TMGNDRNAYRCL*YDKMCSCWVTL
Trigger: TAATGTAACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR CAA 72 bp GCCCAGCAGGACGTCAAAGCACTGAAAGACGCTGCTTaGGCCTGCACTGCCCCCTGCAAACTCCTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: AQQDVKALKDAA*ACTAPCKLLWV
Trigger: GACCCAAAGGAGTTTGCAGGGGGCAGTGCAGGCCAAAGCAGCGTCTTTCAGTGCTTTGACGTCCTGCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR GCA 90 bp CTGCTGGATGCCCAGCAGGACGTCAAAGCACTGAAAGACGCTGCTTTGGCCTGCTGCTTTGGCCTGCACTaGCCCCTGCAAACTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LLDAQQDVKALKDAALACCFGLH*PLQTPL
Trigger: CAAAGGAGTTTGCAGGGGGCAGTGCAGGCCAAAGCA...GCAGGCCAAAGCAGCGTCTTTCAGTGCTTTGACGTCCTGCTGGGCATCCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR GCA 90 bp GCAGATGGTAGCTCCTCAGGGAGACCAGAGCTTTCACACAGGCGTCATAAGCTTCCTCCACCAGCAGTCTaGTGGATGCCCAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: ADGSSSGRPELSHRRHKLPPPAV*WMPSRT
Trigger: CGTCCTGCTGGGCATCCAGCAGACTGCTGGTGGAGG...AAGCTTATGACGCCTGTGTGAAAGCTCTGGTCTCCCTGAGGAGCTACCATCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR TCA 90 bp GACGGAGTCCCGCTCTTTAGCCCAGGCCGGATTGCAGTGGCACAATCTTGGCTCGCCAGCATCACCTTTTaGAAGGACAAACTCACGGAC +
Preference number: 4 (lower is better)
Translates to: DGVPLFSPGRIAVAQSWLASITF*KDKLTD
Trigger: GTCCGTGAGTTTGTCCTTTCAAAAGGTGATGCTGGC...GAGCCAAGATTGTGCCACTGCAATCCGGCCTGGGCTAAAGAGCGGGACTCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518237.6
CDS-3UTR GCA 90 bp TCACGATTTGCAGATGGTAGCTCCTCAGGGAGACCAGAGCTTTCACACAGGCGTAGCACTGAAAGACGCTaGTTTGGCCTGCACTGCCCC +
Preference number: 4 (lower is better)
Translates to: SRFADGSSSGRPELSHRRSTERR*FGLHCP
Trigger: GGGGCAGTGCAGGCCAAAGCAGCGTCTTTCAGTGCT...ACGCCTGTGTGAAAGCTCTGGTCTCCCTGAGGAGCTACCATCTGCAAATCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR TCA 90 bp GCAGATGGTAGCTCCTCAGGGAGACCAGAGCTTTCACACAGGCGTCATAAGCTTATGTCCTGGAGGAACTaGGCAGCATGTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: ADGSSSGRPELSHRRHKLMSWRN*AACPPP
Trigger: TGGTGGAGGACATGCTGCTCAGTTCCTCCAGGACAT...AAGCTTATGACGCCTGTGTGAAAGCTCTGGTCTCCCTGAGGAGCTACCATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR CCA 90 bp GACGGAGTCCCGCTCTTTAGCCCAGGCCGGATTGCAGTGGCACAATCTTGGCTCGTTCCTGTGAGCTGGTaGCATATATCTTCTCATGTC +
Preference number: 4 (lower is better)
Translates to: DGVPLFSPGRIAVAQSWLVPVSW*HISSHV
Trigger: GACATGAGAAGATATATGCCACCAGCTCACAGGAAC...GAGCCAAGATTGTGCCACTGCAATCCGGCCTGGGCTAAAGAGCGGGACTCCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518237.6
CDS-3UTR TCA 90 bp GACGGAGTCCCGCTCTTTAGCCCAGGCCGGATTGCAGTGGCACAATCTTGGCTCTTGTGGTCTGTGAGATaGTCAATGCTGAGCATGTTT +
Preference number: 4 (lower is better)
Translates to: DGVPLFSPGRIAVAQSWLLWSVR*SMLSMF
Trigger: AAACATGCTCAGCATTGATCATCTCACAGACCACAA...GAGCCAAGATTGTGCCACTGCAATCCGGCCTGGGCTAAAGAGCGGGACTCCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518237.6
CDS-3UTR TCA 90 bp TCACGATTTGCAGATGGTAGCTCCTCAGGGAGACCAGAGCTTTCACACAGGCGTAGGACGTCAAAGCACTaGAAGACGCTGCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SRFADGSSSGRPELSHRRRTSKH*KTLLWP
Trigger: AGGCCAAAGCAGCGTCTTTCAGTGCTTTGACGTCCT...ACGCCTGTGTGAAAGCTCTGGTCTCCCTGAGGAGCTACCATCTGCAAATCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR TCA 90 bp TGTGAGCTGGTGGCATATATCTTCTCATGTCCTGGAGGAACTGAGCAGCATGTCACGTGCAAGGCGCTGTaGCTTGTGGTCTGTGAGATG +
Preference number: 4 (lower is better)
Translates to: CELVAYIFSCPGGTEQHVTCKAL*LVVCEM
Trigger: CATCTCACAGACCACAAGTCACAGCGCCTTGCACGT...GACATGCTGCTCAGTTCCTCCAGGACATGAGAAGATATATGCCACCAGCTCACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR TCA 90 bp AGCTCCTCAGGGAGACCAGAGCTTTCACACAGGCGTCATAAGCTTCCCGCAGGCGTCTCCATCACGAAATaGGAACAAAACGTCCATGTT +
Preference number: 4 (lower is better)
Translates to: SSSGRPELSHRRHKLPAGVSITK*EQNVHV
Trigger: AACATGGACGTTTTGTTCTCATTTCGTGATGGAGAC...GCCTGCGGGAAGCTTATGACGCCTGTGTGAAAGCTCTGGTCTCCCTGAGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR GCA 90 bp AAGCTTCCCGCAGGCCAGCATCACCTTTTGAAAGGACAAACTCACGGACTGAGGTTTGCCCCACACATATaGCATGGTGATGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: KLPAGQHHLLKGQTHGLRFAPHI*HGDASQ
Trigger: CTGGGATGCATCACCATGGCATATGTGTGGGGCAAA...CCTCAGTCCGTGAGTTTGTCCTTTCAAAAGGTGATGCTGGCCTGCGGGAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR GCA 90 bp GTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCCCTCCACCAGCAGTCTaGTGGATGCCCAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: VCGSVTMGNDRNAYRCLCPPPAV*WMPSRT
Trigger: CGTCCTGCTGGGCATCCAGCAGACTGCTGGTGGAGG...GCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGAGCCACAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR TCA 90 bp TCACGATTTGCAGATGGTAGCTCCTCAGGGAGACCAGAGCTTTCACACAGGCGTACACATATGCCATGGTaGTGCATCCCAGAACTAGAC +
Preference number: 4 (lower is better)
Translates to: SRFADGSSSGRPELSHRRTHMPW*CIPELD
Trigger: GTCTAGTTCTGGGATGCATCACCATGGCATATGTGT...ACGCCTGTGTGAAAGCTCTGGTCTCCCTGAGGAGCTACCATCTGCAAATCGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR CAA 72 bp AGGCGTCATAAGCTTCCCGCAGGCCAGCATCACCTTTaGAAAGGACAAACTCACGGACTGAGGGATTTGACT +
Preference number: 4 (lower is better)
Translates to: RRHKLPAGQHHL*KGQTHGLRDLT
Trigger: AGTCAAATCCCTCAGTCCGTGAGTTTGTCCTTTCAAAAGGTGATGCTGGCCTGCGGGAAGCTTATGACGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR GCA 90 bp GTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCAGCACTGAAAGACGCTaGTTTGGCCTGCACTGCCCC +
Preference number: 4 (lower is better)
Translates to: VCGSVTMGNDRNAYRCLCSTERR*FGLHCP
Trigger: GGGGCAGTGCAGGCCAAAGCAGCGTCTTTCAGTGCT...GCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGAGCCACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp CCAGCATCACCTTTTGAAAGGACAAACTCACGGACTGAGGGATTTGACTCTAATCAGCAGTCTGCTGGATaGCCAGCAGGACGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: PASPFERTNSRTEGFDSNQQSAG*PAGRQS
Trigger: GCTTTGACGTCCTGCTGGGCATCCAGCAGACTGCTG...ATTAGAGTCAAATCCCTCAGTCCGTGAGTTTGTCCTTTCAAAAGGTGATGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR CCA 90 bp CTGCTGGATGCCCAGCAGGACGTCAAAGCACTGAAAGACGCTGCTTTGGCCTGCACTGAAAAATGCTTTTaGGTTCACATGATTTGCCGT +
Preference number: 4 (lower is better)
Translates to: LLDAQQDVKALKDAALACTEKCF*VHMICR
Trigger: ACGGCAAATCATGTGAACCCAAAAGCATTTTTCAGT...GCAGGCCAAAGCAGCGTCTTTCAGTGCTTTGACGTCCTGCTGGGCATCCAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR CCA 90 bp GCTTTCTCCAAGCAAGAAGCTATTTCCAACAGCGCCTTTAGCAAAGTGTCCCGTCCCTGCAAACTCCTTTaGGTCTTCCCAGAACCCTTC +
Preference number: 4 (lower is better)
Translates to: AFSKQEAISNSAFSKVSRPCKLL*VFPEPF
Trigger: GAAGGGTTCTGGGAAGACCCAAAGGAGTTTGCAGGG...ACGGGACACTTTGCTAAAGGCGCTGTTGGAAATAGCTTCTTGCTTGGAGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR CCA 90 bp CCTGTGAGCTGGTGGCATATATCTTCTCATGTCCTGGAGGAACTGAGCAGCATGGGTCTTATTCTCCTTTaGCTGCTGGCTTGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: PVSWWHISSHVLEELSSMGLILL*LLACRN
Trigger: ATTCCTGCAAGCCAGCAGCCAAAGGAGAATAAGACC...CATGCTGCTCAGTTCCTCCAGGACATGAGAAGATATATGCCACCAGCTCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR CAA 72 bp CTGGCTTGCAGGAATCAGGATGTACTTAGTCACGATTaGCAGATGGTAGCTCCTCAGGGAGACCAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: LACRNQDVLSHD*QMVAPQGDQSF
Trigger: AAAGCTCTGGTCTCCCTGAGGAGCTACCATCTGCAAATCGTGACTAAGTACATCCTGATTCCTGCAAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR TCA 90 bp CCTTTGGGTCTTCCCAGAACCCTTCATACACCAGACCGTCTGATAGCTGGGGGTTATGGTACTCTTTACTaGTTGTCCAGGAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: PLGLPRTLHTPDRLIAGGYGTLY*LSRSFP
Trigger: TGGAAAACTCCTGGACAATCAGTAAAGAGTACCATA...ACCCCCAGCTATCAGACGGTCTGGTGTATGAAGGGTTCTGGGAAGACCCAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR GCA 90 bp TTTGAAAGGACAAACTCACGGACTGAGGGATTTGACTCTAATGAGCACAGGAAGAGTCTGCTCCTCTGGTaGCCCTCAGTGTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: FERTNSRTEGFDSNEHRKSLLLW*PSVSEE
Trigger: CTCTTCAGACACTGAGGGGCACCAGAGGAGCAGACT...CTTCCTGTGCTCATTAGAGTCAAATCCCTCAGTCCGTGAGTTTGTCCTTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR GCA 90 bp TTTTGGGTTCACATGATTTGCCGTGGATTTGGTGAAACACTTGAAGGGCTTTCTGCCTGCACTGCCCCCTaGAAACTCCTTTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: FWVHMICRGFGETLEGLSACTAP*KLLWVF
Trigger: GAAGACCCAAAGGAGTTTGCAGGGGGCAGTGCAGGC...AGAAAGCCCTTCAAGTGTTTCACCAAATCCACGGCAAATCATGTGAACCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR GCA 90 bp CAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCCTCCACCAGCAGTCTaGTGGATGCCCAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: QWVMTGMHTDVSAMIKCAPPPAV*WMPSRT
Trigger: CGTCCTGCTGGGCATCCAGCAGACTGCTGGTGGAGG...AGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp AGACCAGAGCTTTCACACAGGCGTCATAAGCTTCCCGCAGGCCAGCATCACCTTAACAGCAATATTTCTTaGCAAGACCTTACGGACATC +
Preference number: 4 (lower is better)
Translates to: RPELSHRRHKLPAGQHHLNSNIS*QDLTDI
Trigger: GATGTCCGTAAGGTCTTGCCAAGAAATATTGCTGTT...AAGGTGATGCTGGCCTGCGGGAAGCTTATGACGCCTGTGTGAAAGCTCTGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR CCA 90 bp AGCTGGTGGCATATATCTTCTCATGTCCTGGAGGAACTGAGCAGCATGTCCTCCGTTCCTGTGAGCTGGTaGCATATATCTTCTCATGTC +
Preference number: 4 (lower is better)
Translates to: SWWHISSHVLEELSSMSSVPVSW*HISSHV
Trigger: GACATGAGAAGATATATGCCACCAGCTCACAGGAAC...GGAGGACATGCTGCTCAGTTCCTCCAGGACATGAGAAGATATATGCCACCAGCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR GCA 90 bp CCTGTGAGCTGGTGGCATATATCTTCTCATGTCCTGGAGGAACTGAGCAGCATGTGCCAAGACACAGTCTaGATAAACCAAAATAGGAGG +
Preference number: 4 (lower is better)
Translates to: PVSWWHISSHVLEELSSMCQDTV*INQNRR
Trigger: CCTCCTATTTTGGTTTATGCAGACTGTGTCTTGGCA...CATGCTGCTCAGTTCCTCCAGGACATGAGAAGATATATGCCACCAGCTCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR GCA 90 bp AGCTGGTGGCATATATCTTCTCATGTCCTGGAGGAACTGAGCAGCATGTCCTCCGGAAGAATCCTTTACTaGAGTCTCCATCACGAAATG +
Preference number: 4 (lower is better)
Translates to: SWWHISSHVLEELSSMSSGRILY*SLHHEM
Trigger: CATTTCGTGATGGAGACTGCAGTAAAGGATTCTTCC...GGAGGACATGCTGCTCAGTTCCTCCAGGACATGAGAAGATATATGCCACCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR GCA 90 bp GACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTGCCTGCACTGCCCCCTaGAAACTCCTTTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: DRNAYRCLCYDKMCSCWVACTAP*KLLWVF
Trigger: GAAGACCCAAAGGAGTTTGCAGGGGGCAGTGCAGGC...AACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp TTGGTAAAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACGCCCGTTCCTCCTTCTaGTGGCTTGCCGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LVKHCIVLVCGSVTMGNDARSSF*WLAGSQ
Trigger: CTGGGACCCGGCAAGCCAGCAGAAGGAGGAACGGGC...GTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTTTACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522495.5
CDS-3UTR CCA 90 bp TGTGAGCTGGTGGCATATATCTTCTCATGTCCTGGAGGAACTGAGCAGCATGTCGCAGTTCCAGTTTCTTaGAGAGTTGGCAGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: CELVAYIFSCPGGTEQHVAVPVS*RVGSKE
Trigger: TTCCTTACTGCCAACTCTCCAAGAAACTGGAACTGC...GACATGCTGCTCAGTTCCTCCAGGACATGAGAAGATATATGCCACCAGCTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR TCA 90 bp GACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTACGTGCAAGGCGCTGTaGCTTGTGGTCTGTGAGATG +
Preference number: 4 (lower is better)
Translates to: DRNAYRCLCYDKMCSCWVTCKAL*LVVCEM
Trigger: CATCTCACAGACCACAAGTCACAGCGCCTTGCACGT...AACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR TCA 90 bp GTTCACATGATTTGCCGTGGATTTGGTGAAACACTTGAAGGGCTTTCTCCAAGCCACAGGAAGTTCCTGTaGGCTGGTGGCATATATCTT +
Preference number: 4 (lower is better)
Translates to: VHMICRGFGETLEGLSPSHRKFL*AGGIYL
Trigger: AAGATATATGCCACCAGCTCACAGGAACTTCCTGTG...GCTTGGAGAAAGCCCTTCAAGTGTTTCACCAAATCCACGGCAAATCATGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR TCA 90 bp TTTGAAAGGACAAACTCACGGACTGAGGGATTTGACTCTAATGAGCACAGGAAGGCCAGCATCACCTTTTaGAAGGACAAACTCACGGAC +
Preference number: 4 (lower is better)
Translates to: FERTNSRTEGFDSNEHRKASITF*KDKLTD
Trigger: GTCCGTGAGTTTGTCCTTTCAAAAGGTGATGCTGGC...CTTCCTGTGCTCATTAGAGTCAAATCCCTCAGTCCGTGAGTTTGTCCTTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR GCA 90 bp AGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTACAGCCTGCACTGCCCCCTaGAAACTCCTTTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: RNAYRCLCYDKMCSCWVTACTAP*KLLWVF
Trigger: GAAGACCCAAAGGAGTTTGCAGGGGGCAGTGCAGGC...TGTAACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp GCAGATGGTAGCTCCTCAGGGAGACCAGAGCTTTCACACAGGCGTCATAAGCTTAATTCATTAAATCAGTaGCTCCAGTTCCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: ADGSSSGRPELSHRRHKLNSLNQ*LQFLWL
Trigger: AAGCCAAAGGAACTGGAGGCACTGATTTAATGAATT...AAGCTTATGACGCCTGTGTGAAAGCTCTGGTCTCCCTGAGGAGCTACCATCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR CCA 90 bp TCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAACCACCAGCAGTCTGCTaGATGCCCAGCAGGACGTCA +
Preference number: 4 (lower is better)
Translates to: SVTMGNDRNAYRCLCYDKPPAVC*MPSRTS
Trigger: TGACGTCCTGCTGGGCATCCAGCAGACTGCTGGTGG...TTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp GTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTTCTCCTTTGGCTGCTaGCTTGCAGGAATCAGGATG +
Preference number: 4 (lower is better)
Translates to: VCGSVTMGNDRNAYRCLCFSFGC*LAGIRM
Trigger: CATCCTGATTCCTGCAAGCCAGCAGCCAAAGGAGAA...GCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGAGCCACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR TCA 90 bp CAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTACGTGCAAGGCGCTGTaGCTTGTGGTCTGTGAGATG +
Preference number: 4 (lower is better)
Translates to: QWVMTGMHTDVSAMIKCATCKAL*LVVCEM
Trigger: CATCTCACAGACCACAAGTCACAGCGCCTTGCACGT...AGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR TCA 90 bp GACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTAGGACGTCAAAGCACTaGAAGACGCTGCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: DRNAYRCLCYDKMCSCWVRTSKH*KTLLWP
Trigger: AGGCCAAAGCAGCGTCTTTCAGTGCTTTGACGTCCT...AACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR TCA 90 bp CAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTATGTCCTGGAGGAACTaGGCAGCATGTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: QWVMTGMHTDVSAMIKCAMSWRN*AACPPP
Trigger: TGGTGGAGGACATGCTGCTCAGTTCCTCCAGGACAT...AGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR TCA 90 bp TCCAACAGCGCCTTTAGCAAAGTGTCCCGTTCTTGCATTTGCATTGCCTTGAATTTTGGCTTCCAGTTTTaGAGGGTCTTCAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SNSAFSKVSRSCICIALNFGFQF*RVFRGL
Trigger: AAGACCTCTGAAGACCCTTCAAAACTGGAAGCCAAA...ATTCAAGGCAATGCAAATGCAAGAACGGGACACTTTGCTAAAGGCGCTGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR GCA 90 bp AGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTACAGCCATTCTTGTAGTCTaGTCCTCTGGTGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RNAYRCLCYDKMCSCWVTAILVV*SSGAPQ
Trigger: CTGAGGGGCACCAGAGGAGCAGACTACAAGAATGGC...TGTAACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp TCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAAGCACTGAAAGACGCTaGTTTGGCCTGCACTGCCCC +
Preference number: 4 (lower is better)
Translates to: SVTMGNDRNAYRCLCYDKSTERR*FGLHCP
Trigger: GGGGCAGTGCAGGCCAAAGCAGCGTCTTTCAGTGCT...TTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp GTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTCAGCAGTCTGCTGGATaGCCAGCAGGACGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: VMTGMHTDVSAMIKCALVQQSAG*PAGRQS
Trigger: GCTTTGACGTCCTGCTGGGCATCCAGCAGACTGCTG...AACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp TGCCGTGGATTTGGTGAAACACTTGAAGGGCTTTCTCCAAGCAAGAAGCTATTTCTTTGGCTGCTGGCTTaGAGGAATCAGGATGTACTT +
Preference number: 4 (lower is better)
Translates to: CRGFGETLEGLSPSKKLFLWLLA*RNQDVL
Trigger: AAGTACATCCTGATTCCTGCAAGCCAGCAGCCAAAG...AAATAGCTTCTTGCTTGGAGAAAGCCCTTCAAGTGTTTCACCAAATCCACGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR CCA 90 bp TTGGTAAAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACCCACCAGCAGTCTGCTaGATGCCCAGCAGGACGTCA +
Preference number: 4 (lower is better)
Translates to: LVKHCIVLVCGSVTMGNDPPAVC*MPSRTS
Trigger: TGACGTCCTGCTGGGCATCCAGCAGACTGCTGGTGG...GTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTTTACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp GTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCGGTCTTATTCTCCTTTaGCTGCTGGCTTGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: VCGSVTMGNDRNAYRCLCGLILL*LLACRN
Trigger: ATTCCTGCAAGCCAGCAGCCAAAGGAGAATAAGACC...GCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGAGCCACAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR TCA 90 bp GTTCACATGATTTGCCGTGGATTTGGTGAAACACTTGAAGGGCTTTCTCCAAGCTTGTGGTCTGTGAGATaGTCAATGCTGAGCATGTTT +
Preference number: 4 (lower is better)
Translates to: VHMICRGFGETLEGLSPSLWSVR*SMLSMF
Trigger: AAACATGCTCAGCATTGATCATCTCACAGACCACAA...GCTTGGAGAAAGCCCTTCAAGTGTTTCACCAAATCCACGGCAAATCATGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR GCA 90 bp TCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAGCCATTCTTGTAGTCTaGTCCTCTGGTGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SVTMGNDRNAYRCLCYDKAILVV*SSGAPQ
Trigger: CTGAGGGGCACCAGAGGAGCAGACTACAAGAATGGC...TTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp GTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCGTTTTCCATAGCGTGTaGCATTCTTGTAGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: VCGSVTMGNDRNAYRCLCVFHSV*HSCSLL
Trigger: GAGCAGACTACAAGAATGGCACACGCTATGGAAAAC...GCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGAGCCACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp TTGGTAAAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACCAGCAGTCTGCTGGATaGCCAGCAGGACGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: LVKHCIVLVCGSVTMGNDQQSAG*PAGRQS
Trigger: GCTTTGACGTCCTGCTGGGCATCCAGCAGACTGCTG...GTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTTTACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp CTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAAACAATCTTGGCTCACTaGAAGCTCCGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLQWVMTGMHTDVSAMIKTILAH*KLRLPG
Trigger: ACCTGGGAGGCGGAGCTTGCAGTGAGCCAAGATTGT...TTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518237.6
CDS-3UTR CCA 90 bp TTTGAAAGGACAAACTCACGGACTGAGGGATTTGACTCTAATGAGCACAGGAAGACTCTTTCTCGAAGCTaGCCAGACTCTATGAGATCA +
Preference number: 4 (lower is better)
Translates to: FERTNSRTEGFDSNEHRKTLSRS*PDSMRS
Trigger: TGATCTCATAGAGTCTGGCCAGCTTCGAGAAAGAGT...CTTCCTGTGCTCATTAGAGTCAAATCCCTCAGTCCGTGAGTTTGTCCTTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR CCA 90 bp GTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCGCAGTTCCAGTTTCTTaGAGAGTTGGCAGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: VCGSVTMGNDRNAYRCLCAVPVS*RVGSKE
Trigger: TTCCTTACTGCCAACTCTCCAAGAAACTGGAACTGC...GCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGAGCCACAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp AGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTACACCCTGCAAACTCCTTTaGGTCTTCCCAGAACCCTTC +
Preference number: 4 (lower is better)
Translates to: RNAYRCLCYDKMCSCWVTPCKLL*VFPEPF
Trigger: GAAGGGTTCTGGGAAGACCCAAAGGAGTTTGCAGGG...TGTAACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp TCCAACAGCGCCTTTAGCAAAGTGTCCCGTTCTTGCATTTGCATTGCCTTGAATGAAGTTCCTGTGAGCTaGTGGCATATATCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: SNSAFSKVSRSCICIALNEVPVS*WHISSH
Trigger: ATGAGAAGATATATGCCACCAGCTCACAGGAACTTC...ATTCAAGGCAATGCAAATGCAAGAACGGGACACTTTGCTAAAGGCGCTGTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR CAA 72 bp TTAAATCAGTGCCTCCAGTTCCTTTGGCTTCCAGTTTaGAAGGGTCTTCAGAGGTCTTATTCTCCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LNQCLQFLWLPV*KGLQRSYSPLA
Trigger: AGCCAAAGGAGAATAAGACCTCTGAAGACCCTTCAAAACTGGAAGCCAAAGGAACTGGAGGCACTGATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR TCA 90 bp GACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTACACATATGCCATGGTaGTGCATCCCAGAACTAGAC +
Preference number: 4 (lower is better)
Translates to: DRNAYRCLCYDKMCSCWVTHMPW*CIPELD
Trigger: GTCTAGTTCTGGGATGCATCACCATGGCATATGTGT...AACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR TCA 90 bp TCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAAGGACGTCAAAGCACTaGAAGACGCTGCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SVTMGNDRNAYRCLCYDKRTSKH*KTLLWP
Trigger: AGGCCAAAGCAGCGTCTTTCAGTGCTTTGACGTCCT...TTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR TCA 90 bp TTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTATGTCCTGGAGGAACTaGGCAGCATGTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: LQWVMTGMHTDVSAMIKCMSWRN*AACPPP
Trigger: TGGTGGAGGACATGCTGCTCAGTTCCTCCAGGACAT...ACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp AAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATGCCATTCTTGTAGTCTaGTCCTCTGGTGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: KHCIVLVCGSVTMGNDRNAILVV*SSGAPQ
Trigger: CTGAGGGGCACCAGAGGAGCAGACTACAAGAATGGC...ATTCCTGTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp CAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTTTTGCCCCACACATATaGCATGGTGATGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: QWVMTGMHTDVSAMIKCAFAPHI*HGDASQ
Trigger: CTGGGATGCATCACCATGGCATATGTGTGGGGCAAA...AGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp TCCAACAGCGCCTTTAGCAAAGTGTCCCGTTCTTGCATTTGCATTGCCTTGAATTCCCGTTCTTGCATTTaGATTGCCTTGAATACAGTA +
Preference number: 4 (lower is better)
Translates to: SNSAFSKVSRSCICIALNSRSCI*IALNTV
Trigger: TACTGTATTCAAGGCAATGCAAATGCAAGAACGGGA...ATTCAAGGCAATGCAAATGCAAGAACGGGACACTTTGCTAAAGGCGCTGTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR GCA 90 bp AAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATTGCTTTGGCCTGCACTaGCCCCTGCAAACTCCTTTG +
Preference number: 4 (lower is better)
Translates to: KHCIVLVCGSVTMGNDRNCFGLH*PLQTPL
Trigger: CAAAGGAGTTTGCAGGGGGCAGTGCAGGCCAAAGCA...ATTCCTGTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp TTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTTGCTTTGGCCTGCACTaGCCCCTGCAAACTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LQWVMTGMHTDVSAMIKCCFGLH*PLQTPL
Trigger: CAAAGGAGTTTGCAGGGGGCAGTGCAGGCCAAAGCA...ACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp GACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTCTTTGGCTGCTGGCTTaGAGGAATCAGGATGTACTT +
Preference number: 4 (lower is better)
Translates to: DRNAYRCLCYDKMCSCWVLWLLA*RNQDVL
Trigger: AAGTACATCCTGATTCCTGCAAGCCAGCAGCCAAAG...AACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp GACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTTTATTCTCCTTTGGCTaGTGGCTTGCAGGAATCAGG +
Preference number: 4 (lower is better)
Translates to: DRNAYRCLCYDKMCSCWVLFSFG*WLAGIR
Trigger: CCTGATTCCTGCAAGCCAGCAGCCAAAGGAGAATAA...AACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp ATTAACCTTCCTTCAAAAGGGATTTCTCAGTTGTACTTCTTACAGTCTTCAGGATGTAGTCTGCTCCTCTaGTGCCCCTCAGTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: INLPSKGISQLYFLQSSGCSLLL*CPSVSE
Trigger: TTCAGACACTGAGGGGCACCAGAGGAGCAGACTACA...TCCTGAAGACTGTAAGAAGTACAACTGAGAAATCCCTTTTGAAGGAAGGTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR CCA 90 bp GACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTTGCCTCCAGTTCCTTTaGCTTCCAGTTTTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: DRNAYRCLCYDKMCSCWVCLQFL*LPVLKG
Trigger: ACCCTTCAAAACTGGAAGCCAAAGGAACTGGAGGCA...AACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR TCA 90 bp TGCATTTGCATTGCCTTGAATACAGTAGGAATTACTTTGATTGCAGAAGCAGCTTTACGGACATCTCCATaGCCTTTGCCCCACACATAT +
Preference number: 4 (lower is better)
Translates to: CICIALNTVGITLIAEAALRTSP*PLPHTY
Trigger: ATATGTGTGGGGCAAAGGTCATGGAGATGTCCGTAA...AGCTGCTTCTGCAATCAAAGTAATTCCTACTGTATTCAAGGCAATGCAAATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR TCA 90 bp TCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAGCCAGCATCACCTTTTaGAAGGACAAACTCACGGAC +
Preference number: 4 (lower is better)
Translates to: SVTMGNDRNAYRCLCYDKASITF*KDKLTD
Trigger: GTCCGTGAGTTTGTCCTTTCAAAAGGTGATGCTGGC...TTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp GTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCAAAGTGTCCCGTTCTTaGATTTGCATTGCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: VCGSVTMGNDRNAYRCLCKVSRS*ICIALN
Trigger: ATTCAAGGCAATGCAAATGCAAGAACGGGACACTTT...GCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGAGCCACAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp CTCTGCTATGATAAAATGTGCTCTTGTTGGGTTACATTAACCTTCCTTCAAAAGTTCTCCTTTGGCTGCTaGCTTGCAGGAATCAGGATG +
Preference number: 4 (lower is better)
Translates to: LCYDKMCSCWVTLTFLQKFSFGC*LAGIRM
Trigger: CATCCTGATTCCTGCAAGCCAGCAGCCAAAGGAGAA...CTTTTGAAGGAAGGTTAATGTAACCCAACAAGAGCACATTTTATCATAGCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR CCA 90 bp CTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATTCTCCTTTGGCTGCTaGCTTGCAGGAATCAGGATG +
Preference number: 4 (lower is better)
Translates to: LLQWVMTGMHTDVSAMIKFSFGC*LAGIRM
Trigger: CATCCTGATTCCTGCAAGCCAGCAGCCAAAGGAGAA...TTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp TTTTGGGTTCACATGATTTGCCGTGGATTTGGTGAAACACTTGAAGGGCTTTCTGTGGCTCTGTTACAATaGGTAATGACAGGAATGCAT +
Preference number: 4 (lower is better)
Translates to: FWVHMICRGFGETLEGLSVALLQ*VMTGMH
Trigger: ATGCATTCCTGTCATTACCCATTGTAACAGAGCCAC...AGAAAGCCCTTCAAGTGTTTCACCAAATCCACGGCAAATCATGTGAACCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
3UTR CAA 72 bp TTCAGGAAATTCATTAAATCAGTGCCTCCAGTTCCTTaGGCTTCCAGTTTTGAAGGGTCTTCAGAGGTCTTA +
Preference number: 4 (lower is better)
Translates to: FRKFIKSVPPVP*ASSFEGSSEVL
Trigger: TAAGACCTCTGAAGACCCTTCAAAACTGGAAGCCAAAGGAACTGGAGGCACTGATTTAATGAATTTCCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR TCA 90 bp CTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATTACGGACATCTCCATaGCCTTTGCCCCACACATAT +
Preference number: 4 (lower is better)
Translates to: LLQWVMTGMHTDVSAMIKLRTSP*PLPHTY
Trigger: ATATGTGTGGGGCAAAGGTCATGGAGATGTCCGTAA...TTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp TTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTTTTGCCCCACACATATaGCATGGTGATGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: LQWVMTGMHTDVSAMIKCFAPHI*HGDASQ
Trigger: CTGGGATGCATCACCATGGCATATGTGTGGGGCAAA...ACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp TCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAATTATTCTCCTTTGGCTaGTGGCTTGCAGGAATCAGG +
Preference number: 4 (lower is better)
Translates to: SVTMGNDRNAYRCLCYDKLFSFG*WLAGIR
Trigger: CCTGATTCCTGCAAGCCAGCAGCCAAAGGAGAATAA...TTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp GTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCAATTCATTAAATCAGTaGCTCCAGTTCCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: VCGSVTMGNDRNAYRCLCNSLNQ*LQFLWL
Trigger: AAGCCAAAGGAACTGGAGGCACTGATTTAATGAATT...GCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGAGCCACAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp GACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTGGTTTTCAGCTTGCATaGAAGTCTGTGGTTCACTTT +
Preference number: 4 (lower is better)
Translates to: DRNAYRCLCYDKMCSCWVGFQLA*KSVVHF
Trigger: AAAGTGAACCACAGACTTGCATGCAAGCTGAAAACC...AACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522495.5
CDS-3UTR CCA 90 bp AGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTACAATTTTCCTGTGGATTTaGCAGAGCAAAGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: RNAYRCLCYDKMCSCWVTIFLWI*QSKAHF
Trigger: GAAGTGGGCTTTGCTCTGCCAAATCCACAGGAAAAT...TGTAACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp CAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTGTTCCTGTGAGCTGGTaGCATATATCTTCTCATGTC +
Preference number: 4 (lower is better)
Translates to: QWVMTGMHTDVSAMIKCAVPVSW*HISSHV
Trigger: GACATGAGAAGATATATGCCACCAGCTCACAGGAAC...AGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp TCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAGGTCTTATTCTCCTTTaGCTGCTGGCTTGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: SVTMGNDRNAYRCLCYDKGLILL*LLACRN
Trigger: ATTCCTGCAAGCCAGCAGCCAAAGGAGAATAAGACC...TTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp GACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTGTGGCTCTGTTACAATaGGTAATGACAGGAATGCAT +
Preference number: 4 (lower is better)
Translates to: DRNAYRCLCYDKMCSCWVVALLQ*VMTGMH
Trigger: ATGCATTCCTGTCATTACCCATTGTAACAGAGCCAC...AACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR TCA 90 bp CAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTTTGTGGTCTGTGAGATaGTCAATGCTGAGCATGTTT +
Preference number: 4 (lower is better)
Translates to: QWVMTGMHTDVSAMIKCALWSVR*SMLSMF
Trigger: AAACATGCTCAGCATTGATCATCTCACAGACCACAA...AGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR TCA 90 bp TTGGTAAAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACACACATATGCCATGGTaGTGCATCCCAGAACTAGAC +
Preference number: 4 (lower is better)
Translates to: LVKHCIVLVCGSVTMGNDTHMPW*CIPELD
Trigger: GTCTAGTTCTGGGATGCATCACCATGGCATATGTGT...GTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTTTACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR TCA 90 bp AAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATTTACGGACATCTCCATaGCCTTTGCCCCACACATAT +
Preference number: 4 (lower is better)
Translates to: KHCIVLVCGSVTMGNDRNLRTSP*PLPHTY
Trigger: ATATGTGTGGGGCAAAGGTCATGGAGATGTCCGTAA...ATTCCTGTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR TCA 90 bp TTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTCACAGGAAGTTCCTGTaGGCTGGTGGCATATATCTT +
Preference number: 4 (lower is better)
Translates to: LQWVMTGMHTDVSAMIKCHRKFL*AGGIYL
Trigger: AAGATATATGCCACCAGCTCACAGGAACTTCCTGTG...ACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR TCA 90 bp GTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTTTTGGCTTCCAGTTTTaGAGGGTCTTCAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: VMTGMHTDVSAMIKCALVFGFQF*RVFRGL
Trigger: AAGACCTCTGAAGACCCTTCAAAACTGGAAGCCAAA...AACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp AGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTACAGGAAGAATCCTTTACTaGAGTCTCCATCACGAAATG +
Preference number: 4 (lower is better)
Translates to: RNAYRCLCYDKMCSCWVTGRILY*SLHHEM
Trigger: CATTTCGTGATGGAGACTGCAGTAAAGGATTCTTCC...TGTAACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp GACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTTCCCGTTCTTGCATTTaGATTGCCTTGAATACAGTA +
Preference number: 4 (lower is better)
Translates to: DRNAYRCLCYDKMCSCWVSRSCI*IALNTV
Trigger: TACTGTATTCAAGGCAATGCAAATGCAAGAACGGGA...AACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp TTGGTAAAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACCTTTGGCTGCTGGCTTaGAGGAATCAGGATGTACTT +
Preference number: 4 (lower is better)
Translates to: LVKHCIVLVCGSVTMGNDLWLLA*RNQDVL
Trigger: AAGTACATCCTGATTCCTGCAAGCCAGCAGCCAAAG...GTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTTTACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp TTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTTTATTCTCCTTTGGCTaGTGGCTTGCAGGAATCAGG +
Preference number: 4 (lower is better)
Translates to: LQWVMTGMHTDVSAMIKCLFSFG*WLAGIR
Trigger: CCTGATTCCTGCAAGCCAGCAGCCAAAGGAGAATAA...ACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp GTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTATTTTCCTGTGGATTTaGCAGAGCAAAGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: VMTGMHTDVSAMIKCALVIFLWI*QSKAHF
Trigger: GAAGTGGGCTTTGCTCTGCCAAATCCACAGGAAAAT...AACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp TTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTTGCCTCCAGTTCCTTTaGCTTCCAGTTTTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LQWVMTGMHTDVSAMIKCCLQFL*LPVLKG
Trigger: ACCCTTCAAAACTGGAAGCCAAAGGAACTGGAGGCA...ACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR TCA 90 bp TTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTTTTGGCTTCCAGTTTTaGAGGGTCTTCAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LQWVMTGMHTDVSAMIKCFGFQF*RVFRGL
Trigger: AAGACCTCTGAAGACCCTTCAAAACTGGAAGCCAAA...ACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp TCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAATGCCAAGACACAGTCTaGATAAACCAAAATAGGAGG +
Preference number: 4 (lower is better)
Translates to: SVTMGNDRNAYRCLCYDKCQDTV*INQNRR
Trigger: CCTCCTATTTTGGTTTATGCAGACTGTGTCTTGGCA...TTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp AGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTACATCCCGTTCTTGCATTTaGATTGCCTTGAATACAGTA +
Preference number: 4 (lower is better)
Translates to: RNAYRCLCYDKMCSCWVTSRSCI*IALNTV
Trigger: TACTGTATTCAAGGCAATGCAAATGCAAGAACGGGA...TGTAACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp AAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATATTTTCCTGTGGATTTaGCAGAGCAAAGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: KHCIVLVCGSVTMGNDRNIFLWI*QSKAHF
Trigger: GAAGTGGGCTTTGCTCTGCCAAATCCACAGGAAAAT...ATTCCTGTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp TTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCAGTTCCAGTTTCTTaGAGAGTTGGCAGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: LQWVMTGMHTDVSAMIKCAVPVS*RVGSKE
Trigger: TTCCTTACTGCCAACTCTCCAAGAAACTGGAACTGC...ACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp CTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAAGAAGTTCCTGTGAGCTaGTGGCATATATCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LLQWVMTGMHTDVSAMIKEVPVS*WHISSH
Trigger: ATGAGAAGATATATGCCACCAGCTCACAGGAACTTC...TTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp TCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAATTGCATGCAAGTCTGTaGTTCACTTTAGAGGCATTG +
Preference number: 4 (lower is better)
Translates to: SVTMGNDRNAYRCLCYDKLHASL*FTLEAL
Trigger: CAATGCCTCTAAAGTGAACCACAGACTTGCATGCAA...TTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522495.5
CDS-3UTR TCA 90 bp TTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGTCTCCATCACGAAATaGGAACAAAACGTCCATGTT +
Preference number: 4 (lower is better)
Translates to: LQWVMTGMHTDVSAMIKCVSITK*EQNVHV
Trigger: AACATGGACGTTTTGTTCTCATTTCGTGATGGAGAC...ACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR TCA 90 bp TTGGTAAAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACGTCTCCATCACGAAATaGGAACAAAACGTCCATGTT +
Preference number: 4 (lower is better)
Translates to: LVKHCIVLVCGSVTMGNDVSITK*EQNVHV
Trigger: AACATGGACGTTTTGTTCTCATTTCGTGATGGAGAC...GTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTTTACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp TTGGTAAAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACTGCCAAGACACAGTCTaGATAAACCAAAATAGGAGG +
Preference number: 4 (lower is better)
Translates to: LVKHCIVLVCGSVTMGNDCQDTV*INQNRR
Trigger: CCTCCTATTTTGGTTTATGCAGACTGTGTCTTGGCA...GTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTTTACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp CTCTGCTATGATAAAATGTGCTCTTGTTGGGTTACATTAACCTTCCTTCAAAAGCTTTTTCTTCCAGTTTaGCAAGACACAGTCTGCATA +
Preference number: 4 (lower is better)
Translates to: LCYDKMCSCWVTLTFLQKLFLPV*QDTVCI
Trigger: TATGCAGACTGTGTCTTGGCAAACTGGAAGAAAAAG...CTTTTGAAGGAAGGTTAATGTAACCCAACAAGAGCACATTTTATCATAGCAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR GCA 90 bp GTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTCTTTTTCTTCCAGTTTaGCAAGACACAGTCTGCATA +
Preference number: 4 (lower is better)
Translates to: VMTGMHTDVSAMIKCALVLFLPV*QDTVCI
Trigger: TATGCAGACTGTGTCTTGGCAAACTGGAAGAAAAAG...AACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp CTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAACTTTTTCTTCCAGTTTaGCAAGACACAGTCTGCATA +
Preference number: 4 (lower is better)
Translates to: LLQWVMTGMHTDVSAMIKLFLPV*QDTVCI
Trigger: TATGCAGACTGTGTCTTGGCAAACTGGAAGAAAAAG...TTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp TTGGTAAAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACGGAAGAATCCTTTACTaGAGTCTCCATCACGAAATG +
Preference number: 4 (lower is better)
Translates to: LVKHCIVLVCGSVTMGNDGRILY*SLHHEM
Trigger: CATTTCGTGATGGAGACTGCAGTAAAGGATTCTTCC...GTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTTTACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp GTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTAAAGTGTCCCGTTCTTaGATTTGCATTGCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: VMTGMHTDVSAMIKCALVKVSRS*ICIALN
Trigger: ATTCAAGGCAATGCAAATGCAAGAACGGGACACTTT...AACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp AGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTACAAATTCATTAAATCAGTaGCTCCAGTTCCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: RNAYRCLCYDKMCSCWVTNSLNQ*LQFLWL
Trigger: AAGCCAAAGGAACTGGAGGCACTGATTTAATGAATT...TGTAACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp TTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGAAGTTCCTGTGAGCTaGTGGCATATATCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LQWVMTGMHTDVSAMIKCEVPVS*WHISSH
Trigger: ATGAGAAGATATATGCCACCAGCTCACAGGAACTTC...ACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR TCA 90 bp TTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTTATGGTACTCTTTACTaGTTGTCCAGGAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LQWVMTGMHTDVSAMIKCYGTLY*LSRSFP
Trigger: TGGAAAACTCCTGGACAATCAGTAAAGAGTACCATA...ACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR TCA 90 bp ATTAACCTTCCTTCAAAAGGGATTTCTCAGTTGTACTTCTTACAGTCTTCAGGAATATGCGAAGAACACTaGAAAATGCTTTTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: INLPSKGISQLYFLQSSGICEEH*KMLLGS
Trigger: TGAACCCAAAAGCATTTTTCAGTGTTCTTCGCATAT...TCCTGAAGACTGTAAGAAGTACAACTGAGAAATCCCTTTTGAAGGAAGGTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR TCA 90 bp CTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAAATATGCGAAGAACACTaGAAAATGCTTTTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: LLQWVMTGMHTDVSAMIKICEEH*KMLLGS
Trigger: TGAACCCAAAAGCATTTTTCAGTGTTCTTCGCATAT...TTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp TTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTAAAGTGTCCCGTTCTTaGATTTGCATTGCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: LQWVMTGMHTDVSAMIKCKVSRS*ICIALN
Trigger: ATTCAAGGCAATGCAAATGCAAGAACGGGACACTTT...ACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp TTGGTAAAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACAACAGCAATATTTCTTaGCAAGACCTTACGGACATC +
Preference number: 4 (lower is better)
Translates to: LVKHCIVLVCGSVTMGNDNSNIS*QDLTDI
Trigger: GATGTCCGTAAGGTCTTGCCAAGAAATATTGCTGTT...GTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTTTACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp TTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTAACAGCAATATTTCTTaGCAAGACCTTACGGACATC +
Preference number: 4 (lower is better)
Translates to: LQWVMTGMHTDVSAMIKCNSNIS*QDLTDI
Trigger: GATGTCCGTAAGGTCTTGCCAAGAAATATTGCTGTT...ACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR TCA 90 bp AAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATATATGCGAAGAACACTaGAAAATGCTTTTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: KHCIVLVCGSVTMGNDRNICEEH*KMLLGS
Trigger: TGAACCCAAAAGCATTTTTCAGTGTTCTTCGCATAT...ATTCCTGTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp TCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAATTTTCCTACAAGAAATaGACAGGTATTTTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SVTMGNDRNAYRCLCYDKFSYKK*TGILRS
Trigger: AGACCTCAAAATACCTGTGCATTTCTTGTAGGAAAA...TTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp CTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATTTTCCTACAAGAAATaGACAGGTATTTTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LLQWVMTGMHTDVSAMIKFSYKK*TGILRS
Trigger: AGACCTCAAAATACCTGTGCATTTCTTGTAGGAAAA...TTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp TTGGTAAAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACACTGAAAAATGCTTTTaGGTTCACATGATCGTGGAT +
Preference number: 4 (lower is better)
Translates to: LVKHCIVLVCGSVTMGNDTEKCF*VHMIVD
Trigger: ATCCACGATCATGTGAACCCAAAAGCATTTTTCAGT...GTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTTTACCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CCA 90 bp AAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATACTGAAAAATGCTTTTaGGTTCACATGATCGTGGAT +
Preference number: 4 (lower is better)
Translates to: KHCIVLVCGSVTMGNDRNTEKCF*VHMIVD
Trigger: ATCCACGATCATGTGAACCCAAAAGCATTTTTCAGT...ATTCCTGTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp AAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATTTCTTGCATTTGCATTaGCTTGAATACAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: KHCIVLVCGSVTMGNDRNFLHLH*LEYSRN
Trigger: ATTCCTACTGTATTCAAGGCAATGCAAATGCAAGAA...ATTCCTGTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp TTGGTAAAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACTTCTTGCATTTGCATTaGCTTGAATACAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: LVKHCIVLVCGSVTMGNDFLHLH*LEYSRN
Trigger: ATTCCTACTGTATTCAAGGCAATGCAAATGCAAGAA...GTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTTTACCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR GCA 90 bp TTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTTTTTCCTACAAGAAATaGACAGGTATTTTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LQWVMTGMHTDVSAMIKCFSYKK*TGILRS
Trigger: AGACCTCAAAATACCTGTGCATTTCTTGTAGGAAAA...ACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp GACGGAGTCCCGCTCTTTAGCCCAGGCCGGATTGCAGTGGCACAATCTTGGCTCTCTGATAGCTGGGGGTaGCCTTTCCAGCCAGACAAA +
Preference number: 5 (lower is better)
Translates to: DGVPLFSPGRIAVAQSWLSDSWG*PFQPDK
Trigger: TTTGTCTGGCTGGAAAGGCAACCCCCAGCTATCAGA...GAGCCAAGATTGTGCCACTGCAATCCGGCCTGGGCTAAAGAGCGGGACTCCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518237.6
CDS-3UTR CAA 90 bp AGCTCCTCAGGGAGACCAGAGCTTTCACACAGGCGTCATAAGCTTCCCGCAGGCTCTGATAGCTGGGGGTaGCCTTTCCAGCCAGACAAA +
Preference number: 5 (lower is better)
Translates to: SSSGRPELSHRRHKLPAGSDSWG*PFQPDK
Trigger: TTTGTCTGGCTGGAAAGGCAACCCCCAGCTATCAGA...GCCTGCGGGAAGCTTATGACGCCTGTGTGAAAGCTCTGGTCTCCCTGAGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR CAA 90 bp GACGGAGTCCCGCTCTTTAGCCCAGGCCGGATTGCAGTGGCACAATCTTGGCTCCTTTGGCTTCCAGTTTaGAAGGGTCTTCAGAGGTCT +
Preference number: 5 (lower is better)
Translates to: DGVPLFSPGRIAVAQSWLLWLPV*KGLQRS
Trigger: AGACCTCTGAAGACCCTTCAAAACTGGAAGCCAAAG...GAGCCAAGATTGTGCCACTGCAATCCGGCCTGGGCTAAAGAGCGGGACTCCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518237.6
CDS-3UTR CAA 90 bp GACGGAGTCCCGCTCTTTAGCCCAGGCCGGATTGCAGTGGCACAATCTTGGCTCGTCCCGTTCTTGCATTaGCATTGCCTTGAATACAGT +
Preference number: 5 (lower is better)
Translates to: DGVPLFSPGRIAVAQSWLVPFLH*HCLEYS
Trigger: ACTGTATTCAAGGCAATGCAAATGCAAGAACGGGAC...GAGCCAAGATTGTGCCACTGCAATCCGGCCTGGGCTAAAGAGCGGGACTCCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518237.6
CDS-3UTR CAA 90 bp GCTTTCTCCAAGCAAGAAGCTATTTCCAACAGCGCCTTTAGCAAAGTGTCCCGTCTGAAAGACGCTGCTTaGGCCTGCACTGCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: AFSKQEAISNSAFSKVSRLKDAA*ACTAPC
Trigger: GCAGGGGGCAGTGCAGGCCAAAGCAGCGTCTTTCAG...ACGGGACACTTTGCTAAAGGCGCTGTTGGAAATAGCTTCTTGCTTGGAGAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR CAA 90 bp AGACCAGAGCTTTCACACAGGCGTCATAAGCTTCCCGCAGGCCAGCATCACCTTCCTTTGGCTGCTGGCTaGCAGGAATCAGGATGTACT +
Preference number: 5 (lower is better)
Translates to: RPELSHRRHKLPAGQHHLPLAAG*QESGCT
Trigger: AGTACATCCTGATTCCTGCAAGCCAGCAGCCAAAGG...AAGGTGATGCTGGCCTGCGGGAAGCTTATGACGCCTGTGTGAAAGCTCTGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS TCA 90 bp CCTTACGGACATCTCCATGACCTTTGCCCCACACATATGCCATGGTaGTGCATCCCAGAACTAGACGTGCAAGGCGCTGTGACTTGTGGT +
Preference number: 5 (lower is better)
Translates to: PYGHLHDLCPTHMPW*CIPELDVQGAVTCG
Trigger: ACCACAAGTCACAGCGCCTTGCACGTCTAGTTCTGGGATGCATCACCATGGCATATGTGTGGGGCAAAGGTCATGGAGATGTCCGTAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000519154.5
ENST00000521636.1
ENST00000522495.5
CDS-3UTR CAA 90 bp CTGCTGGATGCCCAGCAGGACGTCAAAGCACTGAAAGACGCTGCTTTGGCCTGCCCTTTTTCTTCCAGTTaGCCAAGACACAGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: LLDAQQDVKALKDAALACPFSSS*PRHSLH
Trigger: ATGCAGACTGTGTCTTGGCAAACTGGAAGAAAAAGG...GCAGGCCAAAGCAGCGTCTTTCAGTGCTTTGACGTCCTGCTGGGCATCCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR CAA 90 bp GTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCCTGAAAGACGCTGCTTaGGCCTGCACTGCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: VCGSVTMGNDRNAYRCLCLKDAA*ACTAPC
Trigger: GCAGGGGGCAGTGCAGGCCAAAGCAGCGTCTTTCAG...GCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGAGCCACAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp GACGGAGTCCCGCTCTTTAGCCCAGGCCGGATTGCAGTGGCACAATCTTGGCTCTTGCATAGTATTAGTTaGTGGCTCTGTTACAATGGG +
Preference number: 5 (lower is better)
Translates to: DGVPLFSPGRIAVAQSWLLHSIS*WLCYNG
Trigger: CCCATTGTAACAGAGCCACAAACTAATACTATGCAA...GAGCCAAGATTGTGCCACTGCAATCCGGCCTGGGCTAAAGAGCGGGACTCCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518237.6
CDS GCA 90 bp GGAGTTTTCCATAGCGTGTGCCATTCTTGTAGTCTGCTCCTCTGGTaGCCCTCAGTGTCACAAGCCCATTATGTGAACCGTGTATTTAGG +
Preference number: 5 (lower is better)
Translates to: GVFHSVCHSCSLLLW*PSVSQAHYVNRVFR
Trigger: CCTAAATACACGGTTCACATAATGGGCTTGTGACACTGAGGGGCACCAGAGGAGCAGACTACAAGAATGGCACACGCTATGGAAAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518804.5
CDS-3UTR CAA 90 bp CACGGACTGAGGGATTTGACTCTAATGAGCACAGGAAGTTCCTGTGAGCTGGTGGATTTTCCTGTGGATTaGGCAGAGCAAAGCCCACTT +
Preference number: 5 (lower is better)
Translates to: HGLRDLTLMSTGSSCELVDFPVD*AEQSPL
Trigger: AAGTGGGCTTTGCTCTGCCAAATCCACAGGAAAATC...CACCAGCTCACAGGAACTTCCTGTGCTCATTAGAGTCAAATCCCTCAGTCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR CAA 90 bp GACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTCTGAAAGACGCTGCTTaGGCCTGCACTGCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: DRNAYRCLCYDKMCSCWVLKDAA*ACTAPC
Trigger: GCAGGGGGCAGTGCAGGCCAAAGCAGCGTCTTTCAG...AACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp CTTTGGCTTCCAGTTTTGAAGGGTCTTCAGAGGTCTTATTCTCCTTTGGCTGCTGTGCCTCCAGTTCCTTaGGCTTCCAGTTTTGAAGGG +
Preference number: 5 (lower is better)
Translates to: LWLPVLKGLQRSYSPLAAVPPVP*ASSFEG
Trigger: CCCTTCAAAACTGGAAGCCAAAGGAACTGGAGGCAC...AGCAGCCAAAGGAGAATAAGACCTCTGAAGACCCTTCAAAACTGGAAGCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS TCA 90 bp CCCAGAACTAGACGTGCAAGGCGCTGTGACTTGTGGTCTGTGAGATaGTCAATGCTGAGCATGTTTAACTTCTCAACTCTTTCTCGAAGC +
Preference number: 5 (lower is better)
Translates to: PRTRRARRCDLWSVR*SMLSMFNFSTLSRS
Trigger: GCTTCGAGAAAGAGTTGAGAAGTTAAACATGCTCAGCATTGATCATCTCACAGACCACAAGTCACAGCGCCTTGCACGTCTAGTTCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000519154.5
ENST00000521636.1
ENST00000522495.5
CDS-3UTR CAA 90 bp TCCAACAGCGCCTTTAGCAAAGTGTCCCGTTCTTGCATTTGCATTGCCTTGAATCACGGACTGAGGGATTaGACTCTAATGAGCACAGGA +
Preference number: 5 (lower is better)
Translates to: SNSAFSKVSRSCICIALNHGLRD*TLMSTG
Trigger: TCCTGTGCTCATTAGAGTCAAATCCCTCAGTCCGTG...ATTCAAGGCAATGCAAATGCAAGAACGGGACACTTTGCTAAAGGCGCTGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR CAA 90 bp AGACCAGAGCTTTCACACAGGCGTCATAAGCTTCCCGCAGGCCAGCATCACCTTAAAGGGATTTCTCAGTaGTACTTCTTACAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: RPELSHRRHKLPAGQHHLKGISQ*YFLQSS
Trigger: TGAAGACTGTAAGAAGTACAACTGAGAAATCCCTTT...AAGGTGATGCTGGCCTGCGGGAAGCTTATGACGCCTGTGTGAAAGCTCTGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS GCA 90 bp AATATGGTACTCTTTACTGATTGTCCAGGAGTTTTCCATAGCGTGTaGCATTCTTGTAGTCTGCTCCTCTGGTGCCCCTCAGTGTCTGAA +
Preference number: 5 (lower is better)
Translates to: NMVLFTDCPGVFHSV*HSCSLLLWCPSVSE
Trigger: TTCAGACACTGAGGGGCACCAGAGGAGCAGACTACAAGAATGGCACACGCTATGGAAAACTCCTGGACAATCAGTAAAGAGTACCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000519154.5
ENST00000522840.1
CDS GCA 90 bp AATATGGTACTCTTTACTGATTGTCCAGGAGTTTTCCATAGCGTGTaGCATTCTTGTAGTCTGCTCCTCTGGTGCCCCTCAGTGTCACAA +
Preference number: 5 (lower is better)
Translates to: NMVLFTDCPGVFHSV*HSCSLLLWCPSVSQ
Trigger: TTGTGACACTGAGGGGCACCAGAGGAGCAGACTACAAGAATGGCACACGCTATGGAAAACTCCTGGACAATCAGTAAAGAGTACCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518804.5
CDS CCA 90 bp AGGCAAGGAAGTTCCTTAGTGTTAAATAGACCCAGCTTGGAACTCTaGCTTCACCGCCTGTGGAATCTGAAGTCATTTACCCTGTCTTTC +
Preference number: 5 (lower is better)
Translates to: RQGSSLVLNRPSLEL*LHRLWNLKSFTLSF
Trigger: GAAAGACAGGGTAAATGACTTCAGATTCCACAGGCGGTGAAGCCAGAGTTCCAAGCTGGGTCTATTTAACACTAAGGAACTTCCTTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521480.1
CDS-3UTR CAA 90 bp CCTTTGGCTTCCAGTTTTGAAGGGTCTTCAGAGGTCTTATTCTCCTTTGGCTGCGTCCCGTTCTTGCATTaGCATTGCCTTGAATACAGT +
Preference number: 5 (lower is better)
Translates to: PLASSFEGSSEVLFSFGCVPFLH*HCLEYS
Trigger: ACTGTATTCAAGGCAATGCAAATGCAAGAACGGGAC...GCAGCCAAAGGAGAATAAGACCTCTGAAGACCCTTCAAAACTGGAAGCCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR CAA 90 bp GTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCAGGTCTTATTCTCCTTaGGCTGCTGGCTTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: VCGSVTMGNDRNAYRCLCRSYSP*AAGLQE
Trigger: TTCCTGCAAGCCAGCAGCCAAAGGAGAATAAGACCT...GCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGAGCCACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS GCA 90 bp GGAGTTTTCCATAGCGTGTGCCATTCTTGTAGTCTGCTCCTCTGGTaGCCCTCAGTGTCTGAAGAGTTTTCAGAGCATCTTATAATAGTT +
Preference number: 5 (lower is better)
Translates to: GVFHSVCHSCSLLLW*PSVSEEFSEHLIIV
Trigger: AACTATTATAAGATGCTCTGAAAACTCTTCAGACACTGAGGGGCACCAGAGGAGCAGACTACAAGAATGGCACACGCTATGGAAAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519154.5
ENST00000522840.1
CDS-3UTR CAA 90 bp CCTTTGGCTTCCAGTTTTGAAGGGTCTTCAGAGGTCTTATTCTCCTTTGGCTGCGAACAGCAATATTTCTaGGCAAGACCTTACGGACAT +
Preference number: 5 (lower is better)
Translates to: PLASSFEGSSEVLFSFGCEQQYF*ARPYGH
Trigger: ATGTCCGTAAGGTCTTGCCAAGAAATATTGCTGTTC...GCAGCCAAAGGAGAATAAGACCTCTGAAGACCCTTCAAAACTGGAAGCCAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR CAA 90 bp TCCAACAGCGCCTTTAGCAAAGTGTCCCGTTCTTGCATTTGCATTGCCTTGAATCAAAGTGTCCCGTTCTaGCATTTGCATTGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: SNSAFSKVSRSCICIALNQSVPF*HLHCLE
Trigger: TTCAAGGCAATGCAAATGCAAGAACGGGACACTTTG...ATTCAAGGCAATGCAAATGCAAGAACGGGACACTTTGCTAAAGGCGCTGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR CAA 90 bp GTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCGTACTTAGTCACGATTaGCAGATGGTAGCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: VCGSVTMGNDRNAYRCLCVLSHD*QMVAPQ
Trigger: CTGAGGAGCTACCATCTGCAAATCGTGACTAAGTAC...GCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGAGCCACAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS CCA 90 bp TTTTCCTGTGGATTTGGCAGAGCAAAGCCCACTTCTTCATCAATATaGTACTCTTTACTGATTGTCCAGGAGTTTTCCATAGCGTGTGCC +
Preference number: 5 (lower is better)
Translates to: FSCGFGRAKPTSSSI*YSLLIVQEFSIACA
Trigger: GGCACACGCTATGGAAAACTCCTGGACAATCAGTAAAGAGTACCATATTGATGAAGAAGTGGGCTTTGCTCTGCCAAATCCACAGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000518804.5
ENST00000519154.5
ENST00000522495.5
ENST00000522840.1
CDS-3UTR CAA 90 bp GTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTCCCCTGCAAACTCCTTaGGGTCTTCCCAGAACCCTT +
Preference number: 5 (lower is better)
Translates to: VMTGMHTDVSAMIKCALVPLQTP*GLPRTL
Trigger: AAGGGTTCTGGGAAGACCCAAAGGAGTTTGCAGGGG...AACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp CAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCCTTTGGCTGCTGGCTaGCAGGAATCAGGATGTACT +
Preference number: 5 (lower is better)
Translates to: QWVMTGMHTDVSAMIKCAPLAAG*QESGCT
Trigger: AGTACATCCTGATTCCTGCAAGCCAGCAGCCAAAGG...AGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS GCA 90 bp CAGCTGCTATTTCCACCAATAGAGAGACCAGGAAGAATCCTTTACTaGAGTCTCCATCACGAAATGAGAACAAAACGTCCATGTTCTGTT +
Preference number: 5 (lower is better)
Translates to: QLLFPPIERPGRILY*SLHHEMRTKRPCSV
Trigger: AACAGAACATGGACGTTTTGTTCTCATTTCGTGATGGAGACTGCAGTAAAGGATTCTTCCTGGTCTCTCTATTGGTGGAAATAGCAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS GCA 90 bp CAGCTGCTATTTCCACCAATAGAGAGACCAGGAAGAATCCTTTACTaGAGTCTCCATCACGAAATGAGAACAAAACGTCCATGTTCTCAT +
Preference number: 5 (lower is better)
Translates to: QLLFPPIERPGRILY*SLHHEMRTKRPCSH
Trigger: ATGAGAACATGGACGTTTTGTTCTCATTTCGTGATGGAGACTGCAGTAAAGGATTCTTCCTGGTCTCTCTATTGGTGGAAATAGCAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518237.6
ENST00000519154.5
ENST00000521636.1
ENST00000522495.5
CDS-3UTR CAA 90 bp GTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCACAGTAGGAATTACTTaGATTGCAGAAGCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: VCGSVTMGNDRNAYRCLCTVGIT*IAEAAA
Trigger: AGCAGCTGCTTCTGCAATCAAAGTAATTCCTACTGT...GCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGAGCCACAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp TTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTCCCCTGCAAACTCCTTaGGGTCTTCCCAGAACCCTT +
Preference number: 5 (lower is better)
Translates to: LQWVMTGMHTDVSAMIKCPLQTP*GLPRTL
Trigger: AAGGGTTCTGGGAAGACCCAAAGGAGTTTGCAGGGG...ACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp AAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATCCCCTGCAAACTCCTTaGGGTCTTCCCAGAACCCTT +
Preference number: 5 (lower is better)
Translates to: KHCIVLVCGSVTMGNDRNPLQTP*GLPRTL
Trigger: AAGGGTTCTGGGAAGACCCAAAGGAGTTTGCAGGGG...ATTCCTGTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp AGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTACAGGCCAGCATCACCTTTaGAAAGGACAAACTCACGGA +
Preference number: 5 (lower is better)
Translates to: RNAYRCLCYDKMCSCWVTGQHHL*KGQTHG
Trigger: TCCGTGAGTTTGTCCTTTCAAAAGGTGATGCTGGCC...TGTAACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp CTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAACCTTTGGCTGCTGGCTaGCAGGAATCAGGATGTACT +
Preference number: 5 (lower is better)
Translates to: LLQWVMTGMHTDVSAMIKPLAAG*QESGCT
Trigger: AGTACATCCTGATTCCTGCAAGCCAGCAGCCAAAGG...TTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp CAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTAGGTCTTATTCTCCTTaGGCTGCTGGCTTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: QWVMTGMHTDVSAMIKCARSYSP*AAGLQE
Trigger: TTCCTGCAAGCCAGCAGCCAAAGGAGAATAAGACCT...AGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp GTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGTGCCTCCAGTTCCTTaGGCTTCCAGTTTTGAAGGG +
Preference number: 5 (lower is better)
Translates to: VMTGMHTDVSAMIKCALVVPPVP*ASSFEG
Trigger: CCCTTCAAAACTGGAAGCCAAAGGAACTGGAGGCAC...AACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp TCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAGTGCCTCCAGTTCCTTaGGCTTCCAGTTTTGAAGGG +
Preference number: 5 (lower is better)
Translates to: SVTMGNDRNAYRCLCYDKVPPVP*ASSFEG
Trigger: CCCTTCAAAACTGGAAGCCAAAGGAACTGGAGGCAC...TTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp CAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTGATTTTCCTGTGGATTaGGCAGAGCAAAGCCCACTT +
Preference number: 5 (lower is better)
Translates to: QWVMTGMHTDVSAMIKCADFPVD*AEQSPL
Trigger: AAGTGGGCTTTGCTCTGCCAAATCCACAGGAAAATC...AGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp GACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTCAAAGTGTCCCGTTCTaGCATTTGCATTGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: DRNAYRCLCYDKMCSCWVQSVPF*HLHCLE
Trigger: TTCAAGGCAATGCAAATGCAAGAACGGGACACTTTG...AACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp AAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATTCTGATAGCTGGGGGTaGCCTTTCCAGCCAGACAAA +
Preference number: 5 (lower is better)
Translates to: KHCIVLVCGSVTMGNDRNSDSWG*PFQPDK
Trigger: TTTGTCTGGCTGGAAAGGCAACCCCCAGCTATCAGA...ATTCCTGTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp GTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGCCAGCATCACCTTTaGAAAGGACAAACTCACGGA +
Preference number: 5 (lower is better)
Translates to: VMTGMHTDVSAMIKCALVGQHHL*KGQTHG
Trigger: TCCGTGAGTTTGTCCTTTCAAAAGGTGATGCTGGCC...AACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp CTCTGCTATGATAAAATGTGCTCTTGTTGGGTTACATTAACCTTCCTTCAAAAGAGGTCTTATTCTCCTTaGGCTGCTGGCTTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: LCYDKMCSCWVTLTFLQKRSYSP*AAGLQE
Trigger: TTCCTGCAAGCCAGCAGCCAAAGGAGAATAAGACCT...CTTTTGAAGGAAGGTTAATGTAACCCAACAAGAGCACATTTTATCATAGCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253513.11
CDS-3UTR CAA 90 bp GACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTGTAAAGGTTTTCAGCTaGCATGCAAGTCTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: DRNAYRCLCYDKMCSCWVVKVFS*HASLWF
Trigger: GAACCACAGACTTGCATGCAAGCTGAAAACCTTTAC...AACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522495.5
CDS-3UTR CAA 90 bp GTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGATTTTCCTGTGGATTaGGCAGAGCAAAGCCCACTT +
Preference number: 5 (lower is better)
Translates to: VMTGMHTDVSAMIKCALVDFPVD*AEQSPL
Trigger: AAGTGGGCTTTGCTCTGCCAAATCCACAGGAAAATC...AACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp AGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTACACAGTTTCTTGGAGAGTaGGCAGTAAGGAACAGCAAT +
Preference number: 5 (lower is better)
Translates to: RNAYRCLCYDKMCSCWVTQFLGE*AVRNSN
Trigger: ATTGCTGTTCCTTACTGCCAACTCTCCAAGAAACTG...TGTAACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp CAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCAGTTTCTTGGAGAGTaGGCAGTAAGGAACAGCAAT +
Preference number: 5 (lower is better)
Translates to: QWVMTGMHTDVSAMIKCAQFLGE*AVRNSN
Trigger: ATTGCTGTTCCTTACTGCCAACTCTCCAAGAAACTG...AGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp AGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGGGTTACACCTTTTTCTTCCAGTTaGCCAAGACACAGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: RNAYRCLCYDKMCSCWVTPFSSS*PRHSLH
Trigger: ATGCAGACTGTGTCTTGGCAAACTGGAAGAAAAAGG...TGTAACCCAACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp CAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTGTCCCGTTCTTGCATTaGCATTGCCTTGAATACAGT +
Preference number: 5 (lower is better)
Translates to: QWVMTGMHTDVSAMIKCAVPFLH*HCLEYS
Trigger: ACTGTATTCAAGGCAATGCAAATGCAAGAACGGGAC...AGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp CAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCAAAGTGTCCCGTTCTaGCATTTGCATTGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: QWVMTGMHTDVSAMIKCAQSVPF*HLHCLE
Trigger: TTCAAGGCAATGCAAATGCAAGAACGGGACACTTTG...AGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp AAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATCACGGACTGAGGGATTaGACTCTAATGAGCACAGGA +
Preference number: 5 (lower is better)
Translates to: KHCIVLVCGSVTMGNDRNHGLRD*TLMSTG
Trigger: TCCTGTGCTCATTAGAGTCAAATCCCTCAGTCCGTG...ATTCCTGTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp TTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTCACGGACTGAGGGATTaGACTCTAATGAGCACAGGA +
Preference number: 5 (lower is better)
Translates to: LQWVMTGMHTDVSAMIKCHGLRD*TLMSTG
Trigger: TCCTGTGCTCATTAGAGTCAAATCCCTCAGTCCGTG...ACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp CTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAAGTACTTAGTCACGATTaGCAGATGGTAGCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: LLQWVMTGMHTDVSAMIKVLSHD*QMVAPQ
Trigger: CTGAGGAGCTACCATCTGCAAATCGTGACTAAGTAC...TTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp GTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTGTACTTAGTCACGATTaGCAGATGGTAGCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: VMTGMHTDVSAMIKCALVVLSHD*QMVAPQ
Trigger: CTGAGGAGCTACCATCTGCAAATCGTGACTAAGTAC...AACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp CTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAACTTTGGCTTCCAGTTTaGAAGGGTCTTCAGAGGTCT +
Preference number: 5 (lower is better)
Translates to: LLQWVMTGMHTDVSAMIKLWLPV*KGLQRS
Trigger: AGACCTCTGAAGACCCTTCAAAACTGGAAGCCAAAG...TTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp GTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTCACATGATCGTGGATTaGGTGAAACACTTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: VMTGMHTDVSAMIKCALVHMIVD*VKHLKG
Trigger: GCCCTTCAAGTGTTTCACCAAATCCACGATCATGTG...AACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp TCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAACAGTTTCTTGGAGAGTaGGCAGTAAGGAACAGCAAT +
Preference number: 5 (lower is better)
Translates to: SVTMGNDRNAYRCLCYDKQFLGE*AVRNSN
Trigger: ATTGCTGTTCCTTACTGCCAACTCTCCAAGAAACTG...TTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp TTGGTAAAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACCTTTGGCTTCCAGTTTaGAAGGGTCTTCAGAGGTCT +
Preference number: 5 (lower is better)
Translates to: LVKHCIVLVCGSVTMGNDLWLPV*KGLQRS
Trigger: AGACCTCTGAAGACCCTTCAAAACTGGAAGCCAAAG...GTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTTTACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp TTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTCACATGATCGTGGATTaGGTGAAACACTTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: LQWVMTGMHTDVSAMIKCHMIVD*VKHLKG
Trigger: GCCCTTCAAGTGTTTCACCAAATCCACGATCATGTG...ACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518237.6
ENST00000522495.5
CDS CCA 90 bp TATCAACCTCAGTTTCTTAAAGCTGTCTGGTCACATCTGAAAATATaGCATTTCAGTCAAAGCCTTGGTAAAATAACCAGAGTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: YQPQFLKAVWSHLKI*HFSQSLGKITRVSN
Trigger: GTTGGAGACTCTGGTTATTTTACCAAGGCTTTGACTGAAATGCCATATTTTCAGATGTGACCAGACAGCTTTAAGAAACTGAGGTTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518804.5
ENST00000522840.1
CDS-3UTR CAA 90 bp CTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAAGAACAGCAATATTTCTaGGCAAGACCTTACGGACAT +
Preference number: 5 (lower is better)
Translates to: LLQWVMTGMHTDVSAMIKEQQYF*ARPYGH
Trigger: ATGTCCGTAAGGTCTTGCCAAGAAATATTGCTGTTC...TTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp TTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTCCTTTTTCTTCCAGTTaGCCAAGACACAGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: LQWVMTGMHTDVSAMIKCPFSSS*PRHSLH
Trigger: ATGCAGACTGTGTCTTGGCAAACTGGAAGAAAAAGG...ACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS CCA 90 bp TTAAGACTGCATTTGGTAAAGGTTTTCAGCTTGCATGCAAGTCTGTaGTTCACTTTAGAGGCATTGTTCAATCTTAATGAGAACAAGGAA +
Preference number: 5 (lower is better)
Translates to: LRLHLVKVFSLHASL*FTLEALFNLNENKE
Trigger: TTCCTTGTTCTCATTAAGATTGAACAATGCCTCTAAAGTGAACCACAGACTTGCATGCAAGCTGAAAACCTTTACCAAATGCAGTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522495.5
CDS-3UTR CAA 90 bp TTGGTAAAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACACAGTAGGAATTACTTaGATTGCAGAAGCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: LVKHCIVLVCGSVTMGNDTVGIT*IAEAAA
Trigger: AGCAGCTGCTTCTGCAATCAAAGTAATTCCTACTGT...GTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTTTACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp AAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATACAGTAGGAATTACTTaGATTGCAGAAGCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: KHCIVLVCGSVTMGNDRNTVGIT*IAEAAA
Trigger: AGCAGCTGCTTCTGCAATCAAAGTAATTCCTACTGT...ATTCCTGTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp TCTGTTACAATGGGTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAATTGCATAGTATTAGTTaGTGGCTCTGTTACAATGGG +
Preference number: 5 (lower is better)
Translates to: SVTMGNDRNAYRCLCYDKLHSIS*WLCYNG
Trigger: CCCATTGTAACAGAGCCACAAACTAATACTATGCAA...TTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTACCCATTGTAACAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp GTAATGACAGGAATGCATACAGATGTCTCTGCTATGATAAAATGTGCTCTTGTTAAAGGGATTTCTCAGTaGTACTTCTTACAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: VMTGMHTDVSAMIKCALVKGISQ*YFLQSS
Trigger: TGAAGACTGTAAGAAGTACAACTGAGAAATCCCTTT...AACAAGAGCACATTTTATCATAGCAGAGACATCTGTATGCATTCCTGTCATTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS-3UTR CAA 90 bp AAACATTGCATAGTATTAGTTTGTGGCTCTGTTACAATGGGTAATGACAGGAATAAAGGGATTTCTCAGTaGTACTTCTTACAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: KHCIVLVCGSVTMGNDRNKGISQ*YFLQSS
Trigger: TGAAGACTGTAAGAAGTACAACTGAGAAATCCCTTT...ATTCCTGTCATTACCCATTGTAACAGAGCCACAAACTAATACTATGCAATGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000522495.5
CDS GCA 72 bp CATAGCGTGTGCCATTCTTGTAGTCTGCTCCTCTGGTaGCCCTCAGTGTCACAAGCCCATTATGTGAACCGT +
Preference number: 6 (lower is better)
Translates to: HSVCHSCSLLLW*PSVSQAHYVNR
Trigger: ACGGTTCACATAATGGGCTTGTGACACTGAGGGGCACCAGAGGAGCAGACTACAAGAATGGCACACGCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518804.5
CDS CAA 90 bp CTTGGTAAAATAACCAGAGTCTCCAACTGTGTTCCTTCTGCTGGCTaGCCGGGTCCCAGGTTCCCTGACTGCAATTTTCGGAAGAGCAGA +
Preference number: 6 (lower is better)
Translates to: LGKITRVSNCVPSAG*PGPRFPDCNFRKSR
Trigger: TCTGCTCTTCCGAAAATTGCAGTCAGGGAACCTGGGACCCGGCAAGCCAGCAGAAGGAACACAGTTGGAGACTCTGGTTATTTTACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518804.5
CDS GCA 72 bp TACTCAACTATTAGTCAATGGCTCCTTCTGCTGGCTTaGCGGGTCCCAGGTTCCCTGACTGCAATTTTCGGA +
Preference number: 6 (lower is better)
Translates to: YSTISQWLLLLA*RVPGSLTAIFG
Trigger: TCCGAAAATTGCAGTCAGGGAACCTGGGACCCGGCAAGCCAGCAGAAGGAGCCATTGACTAATAGTTGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519154.5
CDS GCA 72 bp CTCTTTACTGATTGTCCAGGAGTTTTCCATAGCGTGTaGCATTCTTGTAGTCTGCTCCTCTGGTGCCCCTCA +
Preference number: 6 (lower is better)
Translates to: LFTDCPGVFHSV*HSCSLLLWCPS
Trigger: TGAGGGGCACCAGAGGAGCAGACTACAAGAATGGCACACGCTATGGAAAACTCCTGGACAATCAGTAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000518804.5
ENST00000519154.5
ENST00000522495.5
ENST00000522840.1
CDS GCA 72 bp CATAGCGTGTGCCATTCTTGTAGTCTGCTCCTCTGGTaGCCCTCAGTGTCTGAAGAGTTTTCAGAGCATCTT +
Preference number: 6 (lower is better)
Translates to: HSVCHSCSLLLW*PSVSEEFSEHL
Trigger: AAGATGCTCTGAAAACTCTTCAGACACTGAGGGGCACCAGAGGAGCAGACTACAAGAATGGCACACGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519154.5
ENST00000522840.1
CDS CCA 72 bp TTCCATAGCGTGTGCCATTCTTGTAGTCTGCTCCTCTaGTGCCCCTCAGTGTCTGAAGAGTTTTCAGAGCAT +
Preference number: 6 (lower is better)
Translates to: FHSVCHSCSLLL*CPSVSEEFSEH
Trigger: ATGCTCTGAAAACTCTTCAGACACTGAGGGGCACCAGAGGAGCAGACTACAAGAATGGCACACGCTATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253513.11
ENST00000519154.5
ENST00000522840.1
CDS CAA 72 bp ACAGAACAAACATTTTCCTTAACTCCTTCTGCTGGCTaGCCGGGTCCCAGGTTCCCTGACTGCAATTTTCGG +
Preference number: 6 (lower is better)
Translates to: TEQTFSLTPSAG*PGPRFPDCNFR
Trigger: CCGAAAATTGCAGTCAGGGAACCTGGGACCCGGCAAGCCAGCAGAAGGAGTTAAGGAAAATGTTTGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522840.1
CDS CAA 72 bp AGGCAAGGAAGTTCCTTAGTGTTAAATAGACCCAGCTaGGAACTCTGGCTTCACCGCCTGTGGAATCTGAAG +
Preference number: 6 (lower is better)
Translates to: RQGSSLVLNRPS*ELWLHRLWNLK
Trigger: CTTCAGATTCCACAGGCGGTGAAGCCAGAGTTCCAAGCTGGGTCTATTTAACACTAAGGAACTTCCTTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521480.1
CDS CAA 90 bp TTTAGCGGGAGGCAAGGAAGTTCCTTAGTGTTAAATAGACCCAGCTaGGAACTCTGGCTTCACCGCCTGTGGAATCTGAAGTCATTTACC +
Preference number: 6 (lower is better)
Translates to: FSGRQGSSLVLNRPS*ELWLHRLWNLKSFT
Trigger: GGTAAATGACTTCAGATTCCACAGGCGGTGAAGCCAGAGTTCCAAGCTGGGTCTATTTAACACTAAGGAACTTCCTTGCCTCCCGCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521480.1
CDS TCA 72 bp GCAATATTTCTTGGCAAGACCTTACGGACATCTCCATaGCCTTTGCCCCACACATATGCCATGGTGATGCAT +
Preference number: 6 (lower is better)
Translates to: AIFLGKTLRTSP*PLPHTYAMVMH
Trigger: ATGCATCACCATGGCATATGTGTGGGGCAAAGGTCATGGAGATGTCCGTAAGGTCTTGCCAAGAAATATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000519154.5
ENST00000521636.1
ENST00000522495.5
CDS TCA 72 bp AGACGTGCAAGGCGCTGTGACTTGTGGTCTGTGAGATaGTCAATGCTGAGCATGTTTAACTTCTCAACTCTT +
Preference number: 6 (lower is better)
Translates to: RRARRCDLWSVR*SMLSMFNFSTL
Trigger: AAGAGTTGAGAAGTTAAACATGCTCAGCATTGATCATCTCACAGACCACAAGTCACAGCGCCTTGCACGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000519154.5
ENST00000521636.1
ENST00000522495.5
CDS CCA 72 bp AGTTCCTTAGTGTTAAATAGACCCAGCTTGGAACTCTaGCTTCACCGCCTGTGGAATCTGAAGTCATTTACC +
Preference number: 6 (lower is better)
Translates to: SSLVLNRPSLEL*LHRLWNLKSFT
Trigger: GGTAAATGACTTCAGATTCCACAGGCGGTGAAGCCAGAGTTCCAAGCTGGGTCTATTTAACACTAAGGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521480.1
CDS CAA 90 bp GTCTGCATAAACCAAAATAGGAGGCAGTTCCAGTTTCTTGGAGAGTaGGCAGTAAGGAACAGCAATATTTCTTGGCAAGACCTTACGGAC +
Preference number: 6 (lower is better)
Translates to: VCINQNRRQFQFLGE*AVRNSNISWQDLTD
Trigger: GTCCGTAAGGTCTTGCCAAGAAATATTGCTGTTCCTTACTGCCAACTCTCCAAGAAACTGGAACTGCCTCCTATTTTGGTTTATGCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000519154.5
ENST00000521636.1
ENST00000522495.5
CDS GCA 72 bp TTTCCACCAATAGAGAGACCAGGAAGAATCCTTTACTaGAGTCTCCATCACGAAATGAGAACAAAACGTCCA +
Preference number: 6 (lower is better)
Translates to: FPPIERPGRILY*SLHHEMRTKRP
Trigger: TGGACGTTTTGTTCTCATTTCGTGATGGAGACTGCAGTAAAGGATTCTTCCTGGTCTCTCTATTGGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000519154.5
ENST00000521480.1
ENST00000521636.1
ENST00000522495.5
CDS CAA 72 bp AACCAAAATAGGAGGCAGTTCCAGTTTCTTGGAGAGTaGGCAGTAAGGAACAGCAATATTTCTTGGCAAGAC +
Preference number: 6 (lower is better)
Translates to: NQNRRQFQFLGE*AVRNSNISWQD
Trigger: GTCTTGCCAAGAAATATTGCTGTTCCTTACTGCCAACTCTCCAAGAAACTGGAACTGCCTCCTATTTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253513.11
ENST00000518237.6
ENST00000519154.5
ENST00000521636.1
ENST00000522495.5
CDS CAA 90 bp GTGACCACAGTTTATCACAGGGGCAGTGAGAAATTACTTCCACTTTaGGAATGGTTTCATTTTCTAGTTTCACAAGCCCATTATGTGAAC +
Preference number: 6 (lower is better)
Translates to: VTTVYHRGSEKLLPL*EWFHFLVSQAHYVN
Trigger: GTTCACATAATGGGCTTGTGAAACTAGAAAATGAAACCATTCCAAAAGTGGAAGTAATTTCTCACTGCCCCTGTGATAAACTGTGGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522840.1
CDS CCA 72 bp CATTTGGTAAAGGTTTTCAGCTTGCATGCAAGTCTGTaGTTCACTTTAGAGGCATTGTTCAATCTTAATGAG +
Preference number: 6 (lower is better)
Translates to: HLVKVFSLHASL*FTLEALFNLNE
Trigger: CTCATTAAGATTGAACAATGCCTCTAAAGTGAACCACAGACTTGCATGCAAGCTGAAAACCTTTACCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522495.5
CDS TCA 72 bp ATCAACCTCAGTTTCTTAAAGCTGTCTGGTCACATCTaGAAATATGGCATTTCAGTCAAAGCCTTGGTAAAA +
Preference number: 6 (lower is better)
Translates to: INLSFLKLSGHI*KYGISVKALVK
Trigger: TTTTACCAAGGCTTTGACTGAAATGCCATATTTTCAGATGTGACCAGACAGCTTTAAGAAACTGAGGTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518804.5
ENST00000522840.1
CDS CCA 72 bp CAGTTTCTTAAAGCTGTCTGGTCACATCTGAAAATATaGCATTTCAGTCAAAGCCTTGGTAAAATAACCAGA +
Preference number: 6 (lower is better)
Translates to: QFLKAVWSHLKI*HFSQSLGKITR
Trigger: TCTGGTTATTTTACCAAGGCTTTGACTGAAATGCCATATTTTCAGATGTGACCAGACAGCTTTAAGAAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518804.5
ENST00000522840.1
CDS CCA 72 bp AGACAAATATATGCGAAGAACACTGAAAAATGCTTTTaGGTTCACATGATCGTGGATTTGGTGAAACACTTG +
Preference number: 6 (lower is better)
Translates to: RQIYAKNTEKCF*VHMIVDLVKHL
Trigger: CAAGTGTTTCACCAAATCCACGATCATGTGAACCCAAAAGCATTTTTCAGTGTTCTTCGCATATATTTGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518237.6
ENST00000522495.5