RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IDH3G (Homo sapiens)

Ensembl gene IDs: ENSG00000067829

Ensembl transcript IDs: ENST00000217901.10, ENST00000370092.7, ENST00000370093.5, ENST00000427365.6, ENST00000444338.1, ENST00000444450.5, ENST00000454076.5, ENST00000461215.2, ENST00000491235.1, ENST00000495356.5, ENST00000497043.5, ENST00000619865.4

Found 459 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACAGCCTTACGGATGGAGGTGGCATAGGAGTGCAGCCTAGAGGATaGGACAGCCAGCCTTCAGTCCCTGGGGCCCGGAGGGCTGGCCAG +
Preference number: 1 (lower is better)
Translates to: DSLTDGGGIGVQPRG*DSQPSVPGARRAGQ
Trigger: CTGGCCAGCCCTCCGGGCCCCAGGGACTGAAGGCTGGCTGTCCCATCCTCTAGGCTGCACTCCTATGCCACCTCCATCCGTAAGGCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370093.5
3UTR CCA 90 bp TCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTaGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTG +
Preference number: 1 (lower is better)
Translates to: STARPLMTRMWRMTS*MASDVVPWPPMSGV
Trigger: CACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCCGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
3UTR CCA 90 bp GGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATaGGGCCAGATCCAGTACCATCCTCCCCTGGGGGCTGTGGTCAGT +
Preference number: 1 (lower is better)
Translates to: GIATGGKWHQLRARR*GQIQYHPPLGAVVS
Trigger: ACTGACCACAGCCCCCAGGGGAGGATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
3UTR CCA 90 bp CGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTaGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGC +
Preference number: 1 (lower is better)
Translates to: RMWRMTSWMASDVVP*PPMSGVCICRTQAG
Trigger: GCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
3UTR GCA 90 bp CAGGGTAGGGTGCGAGGGGAACCTCACATTCTCATTGTCCATGGATaGCAGGACAGCCTTACGGATGGAGGTGGCATAGGAGTGCAGCCT +
Preference number: 1 (lower is better)
Translates to: QGRVRGEPHILIVHG*QDSLTDGGGIGVQP
Trigger: AGGCTGCACTCCTATGCCACCTCCATCCGTAAGGCTGTCCTGGCATCCATGGACAATGAGAATGTGAGGTTCCCCTCGCACCCTACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370093.5
3UTR CCA 90 bp GCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTaGGAAGGGGAATCCAAGGAGCAAACCAAGAAGGTCCTAGGGCCA +
Preference number: 1 (lower is better)
Translates to: ALFWDLRTRLAGVLE*EGESKEQTKKVLGP
Trigger: TGGCCCTAGGACCTTCTTGGTTTGCTCCTTGGATTCCCCTTCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
3UTR GCA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTaGTGGAGTGGGAAGGGGAATCCAAGGAGCAAACCAAGAAGGTCC +
Preference number: 1 (lower is better)
Translates to: EKVLYSGICVPGWLG*WSGKGNPRSKPRRS
Trigger: GGACCTTCTTGGTTTGCTCCTTGGATTCCCCTTCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
3UTR-3UTR CCA 90 bp GAAGGTCCTAGGGCCAGCCTAGGCCTCCACGGCCCGGCCGTTGATGACGCGGATGGCTGGCTGGGGTGCTaGAGTGGGAAGGGGAATCCA +
Preference number: 2 (lower is better)
Translates to: EGPRASLGLHGPAVDDADGWLGC*SGKGNP
Trigger: TGGATTCCCCTTCCCACTCCAGCACCCCAGCCAGCC...ATCCGCGTCATCAACGGCCGGGCCGTGGAGGCCTAGGCTGGCCCTAGGACCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
3UTR-3UTR CCA 90 bp ACCATCCTCCCCTGGGGGCTGTGGTCAGTGCATGAGGCGGGCTACAGGAGGCTGGTGCAGCCTAGAGGATaGGACAGCCAGCCTTCAGTC +
Preference number: 2 (lower is better)
Translates to: TILPWGLWSVHEAGYRRLVQPRG*DSQPSV
Trigger: GACTGAAGGCTGGCTGTCCCATCCTCTAGGCTGCAC...CAGCCTCCTGTAGCCCGCCTCATGCACTGACCACAGCCCCCAGGGGAGGATGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370093.5
3UTR-3UTR CCA 90 bp GATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGGCTGGCTGGGGTGCTaGAGTGGGAAGGGGAATCCA +
Preference number: 2 (lower is better)
Translates to: DVADDVLDGFRCCALAPDGWLGC*SGKGNP
Trigger: TGGATTCCCCTTCCCACTCCAGCACCCCAGCCAGCC...ATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
3UTR-3UTR CCA 90 bp AGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGAGGCTGGCTGGGGTGCTaGAGTGGGAAGGGGAATCCA +
Preference number: 2 (lower is better)
Translates to: RCFILGSAYQAGWGAGVGGWLGC*SGKGNP
Trigger: TGGATTCCCCTTCCCACTCCAGCACCCCAGCCAGCC...TCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
3UTR-3UTR CCA 90 bp CTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACATCTGCGTACCAGGCTaGCTGGGGTGCTGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: LQMLCPGPRCPECASVGHICVPG*LGCWSG
Trigger: CCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGAT...GTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370092.7
ENST00000370093.5
3UTR-3UTR GCA 90 bp CGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCACTTTATTCTGGGATCTaGGTACCAGGCTGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: RPGWLQMLCPGPRCPECALYSGI*VPGWLG
Trigger: CCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAG...TGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370092.7
ENST00000370093.5
3UTR-3UTR CCA 90 bp TTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCGGCTGGCTGGGGTGCTaGAGTGGGAAGGGGAATCCA +
Preference number: 2 (lower is better)
Translates to: LMTRMWRMTSWMASDVVPGWLGC*SGKGNP
Trigger: TGGATTCCCCTTCCCACTCCAGCACCCCAGCCAGCC...GGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
3UTR-3UTR CCA 90 bp CCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCTCGGCACACACCAGGACAGCCTTACGGATaGAGGTGGCATAGGAGTGCA +
Preference number: 2 (lower is better)
Translates to: PRCPECASVGHRQARHTPGQPYG*RWHRSA
Trigger: TGCACTCCTATGCCACCTCCATCCGTAAGGCTGTCC...TGGTGTGTGCCGAGCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370093.5
3UTR-3UTR CCA 90 bp CGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGACTAAGGGCCAGAAGATaGGGCCAGATCCAGTACCAT +
Preference number: 2 (lower is better)
Translates to: RMTSWMASDVVPWPPMSGLRARR*GQIQYH
Trigger: ATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAG...TCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
3UTR-3UTR CCA 90 bp GGAGTGGGAAGGGGAATCCAAGGAGCAAACCAAGAAGGTCCTAGGGCCAGCCTATCAGATGTTGTGCCCTaGCCCCCGATGTCCGGAGTG +
Preference number: 2 (lower is better)
Translates to: GVGRGIQGANQEGPRASLSDVVP*PPMSGV
Trigger: CACTCCGGACATCGGGGGCCAGGGCACAACATCTGA...TAGGCTGGCCCTAGGACCTTCTTGGTTTGCTCCTTGGATTCCCCTTCCCACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
3UTR-3UTR GCA 90 bp CTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACCTGTCTCCTGTGACGTaGAGGACTGGGATTGCCACA +
Preference number: 2 (lower is better)
Translates to: LQMLCPGPRCPECASVGHLSPVT*RTGIAT
Trigger: TGTGGCAATCCCAGTCCTGCACGTCACAGGAGACAG...GTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
3UTR-3UTR CCA 90 bp GGAGTGGGAAGGGGAATCCAAGGAGCAAACCAAGAAGGTCCTAGGGCCAGCCTAAGTACCATCCTCCCCTaGGGGCTGTGGTCAGTGCAT +
Preference number: 2 (lower is better)
Translates to: GVGRGIQGANQEGPRASLSTILP*GLWSVH
Trigger: ATGCACTGACCACAGCCCCCAGGGGAGGATGGTACT...TAGGCTGGCCCTAGGACCTTCTTGGTTTGCTCCTTGGATTCCCCTTCCCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
3UTR-3UTR CCA 90 bp CTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACTGTGACGTGCAGGACTaGGATTGCCACAGGAGGGAA +
Preference number: 2 (lower is better)
Translates to: LQMLCPGPRCPECASVGHCDVQD*DCHRRE
Trigger: TTCCCTCCTGTGGCAATCCCAGTCCTGCACGTCACA...GTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
3UTR-3UTR CCA 90 bp GTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTACCATCCTCCCCTGAAGGTGCTTTATTCTaGGATCTGCGTACCAGGCTG +
Preference number: 2 (lower is better)
Translates to: VAPAKGQKMGPDPVPSSPEGALF*DLRTRL
Trigger: CAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTC...AGGGGAGGATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370092.7
ENST00000370093.5
3UTR-3UTR CCA 90 bp CTAGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGAAGGTGCTTTATTCTaGGATCTGCGTACCAGGCTG +
Preference number: 2 (lower is better)
Translates to: LGRRCFILGSAYQAGWGAEGALF*DLRTRL
Trigger: CAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTC...AGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
3UTR-3UTR CAA 90 bp GTACCATCCTCCCCTGGGGGCTGTGGTCAGTGCATGAGGCGGGCTACAGGAGGCGGGCTGGCCAGGGGCTaGCGGGGCACTGGGAGCCAC +
Preference number: 3 (lower is better)
Translates to: VPSSPGGCGQCMRRATGGGLARG*RGTGSH
Trigger: GTGGCTCCCAGTGCCCCGCAAGCCCCTGGCCAGCCC...GCCTCCTGTAGCCCGCCTCATGCACTGACCACAGCCCCCAGGGGAGGATGGTAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370093.5
3UTR CCA 72 bp ACGGATGGAGGTGGCATAGGAGTGCAGCCTAGAGGATaGGACAGCCAGCCTTCAGTCCCTGGGGCCCGGAGG +
Preference number: 3 (lower is better)
Translates to: TDGGGIGVQPRG*DSQPSVPGARR
Trigger: CCTCCGGGCCCCAGGGACTGAAGGCTGGCTGTCCCATCCTCTAGGCTGCACTCCTATGCCACCTCCATCCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370093.5
3UTR CCA 72 bp CGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTaGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATG +
Preference number: 3 (lower is better)
Translates to: RPLMTRMWRMTS*MASDVVPWPPM
Trigger: CATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
3UTR GCA 72 bp TCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTaGATCTGTAGGACACAGGCAGGCTCGGCACACACC +
Preference number: 3 (lower is better)
Translates to: SDVVPWPPMSGV*ICRTQAGSAHT
Trigger: GGTGTGTGCCGAGCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
3UTR CCA 72 bp ACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATaGGGCCAGATCCAGTACCATCCTCCCCTGGGGGCT +
Preference number: 3 (lower is better)
Translates to: TGGKWHQLRARR*GQIQYHPPLGA
Trigger: AGCCCCCAGGGGAGGATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
3UTR CCA 72 bp CGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTaGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACA +
Preference number: 3 (lower is better)
Translates to: RMTSWMASDVVP*PPMSGVCICRT
Trigger: TGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
3UTR CCA 72 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTaGCTGGGGTGCTGGAGTGGGAAGGGGAATCCAAGG +
Preference number: 3 (lower is better)
Translates to: EKVLYSGICVPG*LGCWSGKGNPR
Trigger: CCTTGGATTCCCCTTCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
3UTR CCA 72 bp TATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTaGAGTGGGAAGGGGAATCCAAGGAGCAAACCAAGA +
Preference number: 3 (lower is better)
Translates to: YSGICVPGWLGC*SGKGNPRSKPR
Trigger: TCTTGGTTTGCTCCTTGGATTCCCCTTCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
3UTR GCA 72 bp GTGCGAGGGGAACCTCACATTCTCATTGTCCATGGATaGCAGGACAGCCTTACGGATGGAGGTGGCATAGGA +
Preference number: 3 (lower is better)
Translates to: VRGEPHILIVHG*QDSLTDGGGIG
Trigger: TCCTATGCCACCTCCATCCGTAAGGCTGTCCTGGCATCCATGGACAATGAGAATGTGAGGTTCCCCTCGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370093.5
CDS-3UTR GCA 90 bp GAAGGTCCTAGGGCCAGCCTAGGCCTCCACGGCCCGGCCGTTGATGACGCGGATCCGCCTTCGCGGCGCTaGCGGCGACGGTCGCTACCT +
Preference number: 4 (lower is better)
Translates to: EGPRASLGLHGPAVDDADPPSRR*RRRSLP
Trigger: AGGTAGCGACCGTCGCCGGCAGCGCCGCGAAGGCGG...ATCCGCGTCATCAACGGCCGGGCCGTGGAGGCCTAGGCTGGCCCTAGGACCTTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CCTAGGGCCAGCCTAGGCCTCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGCTCCCCTGGGGGCTGTaGTCAGTGCATGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: PRASLGLHGPAVDDADVALPWGL*SVHEAG
Trigger: GCCCGCCTCATGCACTGACCACAGCCCCCAGGGGAG...CGCCACATCCGCGTCATCAACGGCCGGGCCGTGGAGGCCTAGGCTGGCCCTAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp ACCATCCTCCCCTGGGGGCTGTGGTCAGTGCATGAGGCGGGCTACAGGAGGCTGCCGCCTTCGCGGCGCTaGCGGCGACGGTCGCTACCT +
Preference number: 4 (lower is better)
Translates to: TILPWGLWSVHEAGYRRLPPSRR*RRRSLP
Trigger: AGGTAGCGACCGTCGCCGGCAGCGCCGCGAAGGCGG...CAGCCTCCTGTAGCCCGCCTCATGCACTGACCACAGCCCCCAGGGGAGGATGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370093.5
CDS-3UTR GCA 90 bp TCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTCCGCCTTCGCGGCGCTaGCGGCGACGGTCGCTACCT +
Preference number: 4 (lower is better)
Translates to: STARPLMTRMWRMTSWMAPPSRR*RRRSLP
Trigger: AGGTAGCGACCGTCGCCGGCAGCGCCGCGAAGGCGG...AGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCCGTGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp CCTAGGGCCAGCCTAGGCCTCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGCCCGCCACACTCTCATaGTCCAGGCTGCTGTACTCG +
Preference number: 4 (lower is better)
Translates to: PRASLGLHGPAVDDADVAPATLS*SRLLYS
Trigger: CGAGTACAGCAGCCTGGAGCATGAGAGTGTGGCGGG...CGCCACATCCGCGTCATCAACGGCCGGGCCGTGGAGGCCTAGGCTGGCCCTAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CCTAGGGCCAGCCTAGGCCTCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGACCTCCCTGCAGCACTaGAGGAAAAGCCCATCGCCC +
Preference number: 4 (lower is better)
Translates to: PRASLGLHGPAVDDADVATSLQH*RKSPSP
Trigger: GGGCGATGGGCTTTTCCTCCAGTGCTGCAGGGAGGT...CGCCACATCCGCGTCATCAACGGCCGGGCCGTGGAGGCCTAGGCTGGCCCTAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCACCCAGCCACAAGGCCTaGGCCCCCGACCAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: RPGWLQMLCPGPRCPECAPSHKA*APDQSR
Trigger: GCGGGACTGGTCGGGGGCCCAGGCCTTGTGGCTGGG...TGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp TCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTCGCCATGACGGAAAGTaGGAGCCTCCGCACGTCCCG +
Preference number: 4 (lower is better)
Translates to: STARPLMTRMWRMTSWMARHDGK*EPPHVP
Trigger: CGGGACGTGCGGAGGCTCTCACTTTCCGTCATGGCG...AGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCCGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp ACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCGGCTGGCCAGGGGCTTaGGGGGCACTGGGAGCCACT +
Preference number: 4 (lower is better)
Translates to: TSWMASDVVPWPPMSGVCGWPGA*GALGAT
Trigger: AGTGGCTCCCAGTGCCCCGCAAGCCCCTGGCCAGCC...GCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370093.5
CDS-3UTR CCA 90 bp TCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCCCCAGCCACAAGGCCTaGGCCCCCGACCAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: SWMASDVVPWPPMSGVCIPSHKA*APDQSR
Trigger: GCGGGACTGGTCGGGGGCCCAGGCCTTGTGGCTGGG...GATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCCAGCCACAAGGCCTaGGCCCCCGACCAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: DWDCHRREVAPAKGQKMGPSHKA*APDQSR
Trigger: GCGGGACTGGTCGGGGGCCCAGGCCTTGTGGCTGGG...CCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCCTCCCCTGGGGGCTGTaGTCAGTGCATGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: VVPWPPMSGVCICRTQAGLPWGL*SVHEAG
Trigger: GCCCGCCTCATGCACTGACCACAGCCCCCAGGGGAG...GCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp GGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGACCGCCTTCGCGGCGCTaGCGGCGACGGTCGCTACCT +
Preference number: 4 (lower is better)
Translates to: GRRCFILGSAYQAGWGAGPPSRR*RRRSLP
Trigger: AGGTAGCGACCGTCGCCGGCAGCGCCGCGAAGGCGG...TCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR GCA 90 bp GGGCCAGATCCAGTACCATCCTCCCCTGGGGGCTGTGGTCAGTGCATGAGGCGGGGGGGCTGTGGTCAGTaGATGAGGCGGGCTACAGGA +
Preference number: 4 (lower is better)
Translates to: GPDPVPSSPGGCGQCMRRGGCGQ*MRRATG
Trigger: TCCTGTAGCCCGCCTCATGCACTGACCACAGCCCCC...CCGCCTCATGCACTGACCACAGCCCCCAGGGGAGGATGGTACTGGATCTGGCCC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CTCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCCCCGATGCCATCCCCTaGGATCATGGTCACCGTGTG +
Preference number: 4 (lower is better)
Translates to: LHGPAVDDADVADDVLDGPDAIP*DHGHRV
Trigger: CACACGGTGACCATGATCCCAGGGGATGGCATCGGG...GCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCCGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CTCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCATGCAGCATGAGCTCTaGCCCGATGCCATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LHGPAVDDADVADDVLDGMQHEL*PDAIPW
Trigger: CCAGGGGATGGCATCGGGCCAGAGCTCATGCTGCAT...GCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCCGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGCCCAGCCACAAGGCCTaGGCCCCCGACCAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: GEGALFWDLRTRLAGVLEPSHKA*APDQSR
Trigger: GCGGGACTGGTCGGGGGCCCAGGCCTTGTGGCTGGG...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp AAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGCCCAGCCACAAGGCCTaGGCCCCCGACCAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: KVLYSGICVPGWLGCWSGPSHKA*APDQSR
Trigger: GCGGGACTGGTCGGGGGCCCAGGCCTTGTGGCTGGG...CCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp AGCCTAGAGGATGGGACAGCCAGCCTTCAGTCCCTGGGGCCCGGAGGGCTGGCCGGGTGGCCGTGGGGTTaGCGATGTTCTTATTGGCGA +
Preference number: 4 (lower is better)
Translates to: SLEDGTASLQSLGPGGLAGWPWG*RCSYWR
Trigger: TCGCCAATAAGAACATCGCCAACCCCACGGCCACCC...GGCCAGCCCTCCGGGCCCCAGGGACTGAAGGCTGGCTGTCCCATCCTCTAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370093.5
CDS-3UTR CCA 90 bp CCTAGGGCCAGCCTAGGCCTCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGGGACAGCCTTACGGATaGAGGTGGCATAGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: PRASLGLHGPAVDDADVAGQPYG*RWHRSA
Trigger: TGCACTCCTATGCCACCTCCATCCGTAAGGCTGTCC...CGCCACATCCGCGTCATCAACGGCCGGGCCGTGGAGGCCTAGGCTGGCCCTAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp ACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCCGCCATGACGGAAAGTaGGAGCCTCCGCACGTCCCG +
Preference number: 4 (lower is better)
Translates to: TSWMASDVVPWPPMSGVCRHDGK*EPPHVP
Trigger: CGGGACGTGCGGAGGCTCTCACTTTCCGTCATGGCG...GCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp GTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGCCATGACGGAAAGTaGGAGCCTCCGCACGTCCCG +
Preference number: 4 (lower is better)
Translates to: VADDVLDGFRCCALAPDVRHDGK*EPPHVP
Trigger: CGGGACGTGCGGAGGCTCTCACTTTCCGTCATGGCG...GACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp GGAGTGCAGCCTAGAGGATGGGACAGCCAGCCTTCAGTCCCTGGGGCCCGGAGGTCCGGCGGATGGCCATaGTGGCATTGCGAATGTCCT +
Preference number: 4 (lower is better)
Translates to: GVQPRGWDSQPSVPGARRSGGWP*WHCECP
Trigger: AGGACATTCGCAATGCCATCATGGCCATCCGCCGGA...CCTCCGGGCCCCAGGGACTGAAGGCTGGCTGTCCCATCCTCTAGGCTGCACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370093.5
CDS-3UTR TCA 90 bp GAAGGTCCTAGGGCCAGCCTAGGCCTCCACGGCCCGGCCGTTGATGACGCGGATTCTCCTGCGCCAGCTTaGAGGCATACTCGGCAATGC +
Preference number: 4 (lower is better)
Translates to: EGPRASLGLHGPAVDDADSPAPA*RHTRQC
Trigger: GCATTGCCGAGTATGCCTTCAAGCTGGCGCAGGAGA...ATCCGCGTCATCAACGGCCGGGCCGTGGAGGCCTAGGCTGGCCCTAGGACCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp GGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGAGCTGTGGTCAGTGCATaGGGCGGGCTACAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GPAVDDADVADDVLDGFRAVVSA*GGLQEA
Trigger: AGCCTCCTGTAGCCCGCCTCATGCACTGACCACAGC...TCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp TCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTCCCGCCACACTCTCATaGTCCAGGCTGCTGTACTCG +
Preference number: 4 (lower is better)
Translates to: STARPLMTRMWRMTSWMAPATLS*SRLLYS
Trigger: CGAGTACAGCAGCCTGGAGCATGAGAGTGTGGCGGG...AGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCCGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp GAAGGTCCTAGGGCCAGCCTAGGCCTCCACGGCCCGGCCGTTGATGACGCGGATAGGCATACTCGGCAATaGGCAGGGACTTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: EGPRASLGLHGPAVDDADRHTRQ*AGTWPW
Trigger: CCAAGGCCAAGTCCCTGCGCATTGCCGAGTATGCCT...ATCCGCGTCATCAACGGCCGGGCCGTGGAGGCCTAGGCTGGCCCTAGGACCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp ACCATCCTCCCCTGGGGGCTGTGGTCAGTGCATGAGGCGGGCTACAGGAGGCTGTTGCGCCCGCTCTCCTaGGCCAGCTTGAAGGCATAC +
Preference number: 4 (lower is better)
Translates to: TILPWGLWSVHEAGYRRLLRPLS*ASLKAY
Trigger: GTATGCCTTCAAGCTGGCGCAGGAGAGCGGGCGCAA...CAGCCTCCTGTAGCCCGCCTCATGCACTGACCACAGCCCCCAGGGGAGGATGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370093.5
CDS-3UTR GCA 90 bp ACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCCGGCCGTCACTTTCTTaGGCCCGCTCTCCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: TSWMASDVVPWPPMSGVCRPSLS*ARSPAP
Trigger: TGGCGCAGGAGAGCGGGCGCAAGAAAGTGACGGCCG...GCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp CGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCACTGAGGGTAGCGGGCTaGCACCTCCCTGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: RPGWLQMLCPGPRCPECALRVAG*HLPAAL
Trigger: CAGTGCTGCAGGGAGGTGGCAGCCCGCTACCCTCAG...TGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCTCGGCACATGCAGCATGAGCTCTaGCCCGATGCCATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PGPRCPECASVGHRQARHMQHEL*PDAIPW
Trigger: CCAGGGGATGGCATCGGGCCAGAGCTCATGCTGCAT...GTGCCGAGCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CCTAGGGCCAGCCTAGGCCTCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGGACGGTGGCAGGTTATaGTTGGTTTCGATGTTGCCC +
Preference number: 4 (lower is better)
Translates to: PRASLGLHGPAVDDADVADGGRL*LVSMLP
Trigger: GGGCAACATCGAAACCAACCATAACCTGCCACCGTC...CGCCACATCCGCGTCATCAACGGCCGGGCCGTGGAGGCCTAGGCTGGCCCTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp AGCCTAGAGGATGGGACAGCCAGCCTTCAGTCCCTGGGGCCCGGAGGGCTGGCCGGACAGCCTTACGGATaGAGGTGGCATAGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: SLEDGTASLQSLGPGGLAGQPYG*RWHRSA
Trigger: TGCACTCCTATGCCACCTCCATCCGTAAGGCTGTCC...GGCCAGCCCTCCGGGCCCCAGGGACTGAAGGCTGGCTGTCCCATCCTCTAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370093.5
CDS-3UTR CCA 90 bp GATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATCTCCCCTGGGGGCTGTaGTCAGTGCATGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: DVADDVLDGFRCCALAPDLPWGL*SVHEAG
Trigger: GCCCGCCTCATGCACTGACCACAGCCCCCAGGGGAG...ATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CTGGAGTGGGAAGGGGAATCCAAGGAGCAAACCAAGAAGGTCCTAGGGCCAGCCCCAGCCTTCAGTCCCTaGGGCCCGGAGGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LEWEGESKEQTKKVLGPAPAFSP*GPEGWP
Trigger: TGGCCAGCCCTCCGGGCCCCAGGGACTGAAGGCTGG...GGCTGGCCCTAGGACCTTCTTGGTTTGCTCCTTGGATTCCCCTTCCCACTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370093.5
CDS-3UTR CCA 90 bp CTCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCGTGCAGCCTAGAGGATaGGACAGCCAGCCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: LHGPAVDDADVADDVLDGVQPRG*DSQPSV
Trigger: GACTGAAGGCTGGCTGTCCCATCCTCTAGGCTGCAC...GCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCCGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370093.5
CDS-3UTR TCA 90 bp CCTAGGGCCAGCCTAGGCCTCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGCCGCGCAGACATTGTTaGCGATGTTGCCATAGAGAT +
Preference number: 4 (lower is better)
Translates to: PRASLGLHGPAVDDADVAPRRHC*RCCHRD
Trigger: ATCTCTATGGCAACATCGTCAACAATGTCTGCGCGG...CGCCACATCCGCGTCATCAACGGCCGGGCCGTGGAGGCCTAGGCTGGCCCTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp GGAGACTGGGCGGGGCAGCAGGGTAGGGTGCGAGGGGAACCTCACATTCTCATTCGCGGATGTGGCGGATaGCGTCCTGGATGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GDWAGQQGRVRGEPHILIRGCGG*RPGWLQ
Trigger: CTGAAGCCATCCAGGACGTCATCCGCCACATCCGCG...AATGAGAATGTGAGGTTCCCCTCGCACCCTACCCTGCTGCCCCGCCCAGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370093.5
CDS-3UTR TCA 90 bp GGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGGCTGTGGTCAGTGCATaGGGCGGGCTACAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GIATGGKWHQLRARRWGQAVVSA*GGLQEA
Trigger: AGCCTCCTGTAGCCCGCCTCATGCACTGACCACAGC...CTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp GGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGCCCCGCTGTCTCCTGTaGCGTGCAGGACTGGGATTG +
Preference number: 4 (lower is better)
Translates to: GIATGGKWHQLRARRWGQPRCLL*RAGLGL
Trigger: CAATCCCAGTCCTGCACGTCACAGGAGACAGCGGGG...CTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp GAAGGTCCTAGGGCCAGCCTAGGCCTCCACGGCCCGGCCGTTGATGACGCGGATAAGACGGACTTGACATaGAGCATGAGCTCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: EGPRASLGLHGPAVDDADKTDLT*SMSSGP
Trigger: CGGGCCAGAGCTCATGCTGCATGTCAAGTCCGTCTT...ATCCGCGTCATCAACGGCCGGGCCGTGGAGGCCTAGGCTGGCCCTAGGACCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp GGAGTGCAGCCTAGAGGATGGGACAGCCAGCCTTCAGTCCCTGGGGCCCGGAGGATGTCTATGTCCTTGTaGCGGGTCACCACGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GVQPRGWDSQPSVPGARRMSMSL*RVTTPG
Trigger: TCCAGGCGTGGTGACCCGGCACAAGGACATAGACAT...CCTCCGGGCCCCAGGGACTGAAGGCTGGCTGTCCCATCCTCTAGGCTGCACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370093.5
CDS-3UTR GCA 90 bp TGTGACGTGCAGGACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCGGCCGTCACTTTCTTaGGCCCGCTCTCCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: CDVQDWDCHRREVAPAKGRPSLS*ARSPAP
Trigger: TGGCGCAGGAGAGCGGGCGCAAGAAAGTGACGGCCG...GCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTCCTGCACGTCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp TGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCACTGAGGGTAGCGGGCTaGCACCTCCCTGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: WDCHRREVAPAKGQKMGPLRVAG*HLPAAL
Trigger: CAGTGCTGCAGGGAGGTGGCAGCCCGCTACCCTCAG...TGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp GCCAGATCCAGTACCATCCTCCCCTGGGGGCTGTGGTCAGTGCATGAGGCGGGCGGCCGGGACACCAGCTaGATGGTGGTGTTATCCACA +
Preference number: 4 (lower is better)
Translates to: ARSSTILPWGLWSVHEAGGRDTS*MVVLST
Trigger: TGTGGATAACACCACCATGCAGCTGGTGTCCCGGCC...GCCCGCCTCATGCACTGACCACAGCCCCCAGGGGAGGATGGTACTGGATCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370093.5
CDS-3UTR CCA 90 bp AGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGAACGGCAGAGAAGGGCTaGCCCGAGCACCGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: RCFILGSAYQAGWGAGVGTAEKG*PEHRLR
Trigger: GCGAAGGCGGTGCTCGGGCCAGCCCTTCTCTGCCGT...TCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CCA 90 bp GGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAACGGCAGAGAAGGGCTaGCCCGAGCACCGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: GRRCFILGSAYQAGWGAGTAEKG*PEHRLR
Trigger: GCGAAGGCGGTGCTCGGGCCAGCCCTTCTCTGCCGT...TCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CCA 90 bp AGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTACCATCCACGGCAGAGAAGGGCTaGCCCGAGCACCGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: REVAPAKGQKMGPDPVPSTAEKG*PEHRLR
Trigger: GCGAAGGCGGTGCTCGGGCCAGCCCTTCTCTGCCGT...GGATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCTCGAGGGGACCTCGTaGGCGCCTAGAACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QMLCPGPRCPECASVGHRLEGTS*APRTSQ
Trigger: CTGGGAGGTTCTAGGCGCCCACGAGGTCCCCTCGAG...CCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCTCGGCACCCGGGTCACCACGCCTaGAAGGCTCTTACAGTGGAT +
Preference number: 4 (lower is better)
Translates to: PGPRCPECASVGHRQARHPGHHA*KALTVD
Trigger: ATCCACTGTAAGAGCCTTCCAGGCGTGGTGACCCGG...GTGCCGAGCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGAACCTCCCTGCAGCACTaGAGGAAAAGCCCATCGCCC +
Preference number: 4 (lower is better)
Translates to: GPAVDDADVADDVLDGFRTSLQH*RKSPSP
Trigger: GGGCGATGGGCTTTTCCTCCAGTGCTGCAGGGAGGT...TCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GTGCAGGACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGAGCTGGCCAGCAGGGTaGCCGTGGGGTTGGCGATGT +
Preference number: 4 (lower is better)
Translates to: VQDWDCHRREVAPAKGQKSWPAG*PWGWRC
Trigger: ACATCGCCAACCCCACGGCCACCCTGCTGGCCAGCT...CTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTCCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGAGCTGGCCAGCAGGGTaGCCGTGGGGTTGGCGATGT +
Preference number: 4 (lower is better)
Translates to: QMLCPGPRCPECASVGHRSWPAG*PWGWRC
Trigger: ACATCGCCAACCCCACGGCCACCCTGCTGGCCAGCT...CCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCTCGGCACACACCAGGCTGGCTGGGGTGCTaGAGTGGGAAGGGGAATCCA +
Preference number: 4 (lower is better)
Translates to: PRCPECASVGHRQARHTPGWLGC*SGKGNP
Trigger: TGGATTCCCCTTCCCACTCCAGCACCCCAGCCAGCC...TGGTGTGTGCCGAGCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGGGCTGGCTGGGGTGCTaGAGTGGGAAGGGGAATCCA +
Preference number: 4 (lower is better)
Translates to: GIATGGKWHQLRARRWGQGWLGC*SGKGNP
Trigger: TGGATTCCCCTTCCCACTCCAGCACCCCAGCCAGCC...CTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CACGGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGTACCATCCTCCCCTaGGGGCTGTGGTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: HGPAVDDADVADDVLDGFSTILP*GLWSVH
Trigger: ATGCACTGACCACAGCCCCCAGGGGAGGATGGTACT...GAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CTCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTGTGACGTGCAGGACTaGGATTGCCACAGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LHGPAVDDADVADDVLDGCDVQD*DCHRRE
Trigger: TTCCCTCCTGTGGCAATCCCAGTCCTGCACGTCACA...GCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCCGTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp CCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCTCGGCACTCATGTTCTCGAAGGTaGTCTGAGGGTAGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: PGPRCPECASVGHRQARHSCSRR*SEGSGL
Trigger: CAGCCCGCTACCCTCAGATCACCTTCGAGAACATGA...GTGCCGAGCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp CACGGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCGATTGGGCATCACCATaGCATCAAACTGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: HGPAVDDADVADDVLDGFDWASP*HQTAGA
Trigger: GGCCCCAGCAGTTTGATGTCATGGTGATGCCCAATC...GAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp GACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCGCGGATGTGGCGGATaGCGTCCTGGATGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: DWDCHRREVAPAKGQKMGRGCGG*RPGWLQ
Trigger: CTGAAGCCATCCAGGACGTCATCCGCCACATCCGCG...CCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp CAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGGCTGTGGTCAGTGCATaGGGCGGGCTACAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: QMLCPGPRCPECASVGHRAVVSA*GGLQEA
Trigger: AGCCTCCTGTAGCCCGCCTCATGCACTGACCACAGC...CCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp CCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCTCGGCACACACCATTGCGCCCGCTCTCCTaGGCCAGCTTGAAGGCATAC +
Preference number: 4 (lower is better)
Translates to: PRCPECASVGHRQARHTPLRPLS*ASLKAY
Trigger: GTATGCCTTCAAGCTGGCGCAGGAGAGCGGGCGCAA...TGGTGTGTGCCGAGCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp AGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGACGGCCGTCACTTTCTTaGGCCCGCTCTCCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: RCFILGSAYQAGWGAGVGRPSLS*ARSPAP
Trigger: TGGCGCAGGAGAGCGGGCGCAAGAAAGTGACGGCCG...TCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR GCA 90 bp GATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGCGGCCGTCACTTTCTTaGGCCCGCTCTCCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: DDADVADDVLDGFRCCALRPSLS*ARSPAP
Trigger: TGGCGCAGGAGAGCGGGCGCAAGAAAGTGACGGCCG...CAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp GGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGACTGAGGGTAGCGGGCTaGCACCTCCCTGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: GRRCFILGSAYQAGWGAGLRVAG*HLPAAL
Trigger: CAGTGCTGCAGGGAGGTGGCAGCCCGCTACCCTCAG...TCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR GCA 90 bp CCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCTCGGCACACACCATGGCTTCAGATGTTGTaGCCTGGCCCCCGATGTCCG +
Preference number: 4 (lower is better)
Translates to: PRCPECASVGHRQARHTPWLQML*PGPRCP
Trigger: CGGACATCGGGGGCCAGGGCACAACATCTGAAGCCA...TGGTGTGTGCCGAGCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp CGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATGGCTTCAGATGTTGTaGCCTGGCCCCCGATGTCCG +
Preference number: 4 (lower is better)
Translates to: RPGWLQMLCPGPRCPECAWLQML*PGPRCP
Trigger: CGGACATCGGGGGCCAGGGCACAACATCTGAAGCCA...TGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp CACGGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCCTTTATTCTGGGATCTaGGTACCAGGCTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HGPAVDDADVADDVLDGFLYSGI*VPGWLG
Trigger: CCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAG...GAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370092.7
ENST00000370093.5
CDS-3UTR GCA 90 bp GTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCGAGAGTTCGACGGGGTaGGAAGTTTCGGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: VADDVLDGFRCCALAPDVESSTG*EVSGTG
Trigger: GCCTGTCCCCGAAACTTCGCACCCCGTCGAACTCTC...GACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370092.7
CDS-3UTR GCA 90 bp GTGCAGGACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGGGGGGCTGTGGTCAGTaGATGAGGCGGGCTACAGGA +
Preference number: 4 (lower is better)
Translates to: VQDWDCHRREVAPAKGQKGGCGQ*MRRATG
Trigger: TCCTGTAGCCCGCCTCATGCACTGACCACAGCCCCC...CTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTCCTGCAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp ATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGGGGGGCTGTGGTCAGTaGATGAGGCGGGCTACAGGA +
Preference number: 4 (lower is better)
Translates to: MWRMTSWMASDVVPWPPMGGCGQ*MRRATG
Trigger: TCCTGTAGCCCGCCTCATGCACTGACCACAGCCCCC...CATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACAT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp GCCAGATCCAGTACCATCCTCCCCTGGGGGCTGTGGTCAGTGCATGAGGCGGGCCCGATGTCCGGAGTGTaGATCTGTAGGACACAGGCA +
Preference number: 4 (lower is better)
Translates to: ARSSTILPWGLWSVHEAGPMSGV*ICRTQA
Trigger: TGCCTGTGTCCTACAGATGCACACTCCGGACATCGG...GCCCGCCTCATGCACTGACCACAGCCCCCAGGGGAGGATGGTACTGGATCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370093.5
CDS-3UTR CCA 90 bp AAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGCTCGAGGGGACCTCGTaGGCGCCTAGAACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: KVLYSGICVPGWLGCWSGLEGTS*APRTSQ
Trigger: CTGGGAGGTTCTAGGCGCCCACGAGGTCCCCTCGAG...CCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CCA 90 bp GTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCCCGATGCCATCCCCTaGGATCATGGTCACCGTGTG +
Preference number: 4 (lower is better)
Translates to: VADDVLDGFRCCALAPDVPDAIP*DHGHRV
Trigger: CACACGGTGACCATGATCCCAGGGGATGGCATCGGG...GACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp AGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGAAGCTGGCCAGCAGGGTaGCCGTGGGGTTGGCGATGT +
Preference number: 4 (lower is better)
Translates to: RCFILGSAYQAGWGAGVGSWPAG*PWGWRC
Trigger: ACATCGCCAACCCCACGGCCACCCTGCTGGCCAGCT...TCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp CGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTAGCTGGCCAGCAGGGTaGCCGTGGGGTTGGCGATGT +
Preference number: 4 (lower is better)
Translates to: RPLMTRMWRMTSWMASDVSWPAG*PWGWRC
Trigger: ACATCGCCAACCCCACGGCCACCCTGCTGGCCAGCT...AACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGCTGGCCAGCAGGGTaGCCGTGGGGTTGGCGATGT +
Preference number: 4 (lower is better)
Translates to: REKVLYSGICVPGWLGCWSWPAG*PWGWRC
Trigger: ACATCGCCAACCCCACGGCCACCCTGCTGGCCAGCT...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp ACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCTCAGATGTTGTGCCCTaGCCCCCGATGTCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: TSWMASDVVPWPPMSGVCSDVVP*PPMSGV
Trigger: CACTCCGGACATCGGGGGCCAGGGCACAACATCTGA...GCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CACGGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCTTGATGACGCGGATGTaGCGGATGACGTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: HGPAVDDADVADDVLDGFLMTRM*RMTSWM
Trigger: CATCCAGGACGTCATCCGCCACATCCGCGTCATCAA...GAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GTGCAGGACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATCTGCGTACCAGGCTaGCTGGGGTGCTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VQDWDCHRREVAPAKGQKICVPG*LGCWSG
Trigger: CCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGAT...CTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CCA 90 bp GGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGGCCACAGGAGGGAAGTaGCACCAGCTAAGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: GIATGGKWHQLRARRWGQATGGK*HQLRAR
Trigger: TCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGC...CTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCTCGGCACTGTGACGTGCAGGACTaGGATTGCCACAGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: PGPRCPECASVGHRQARHCDVQD*DCHRRE
Trigger: TTCCCTCCTGTGGCAATCCCAGTCCTGCACGTCACA...GTGCCGAGCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTCGCCATGACGGAAAGTaGGAGCCTCCGCACGTCCCG +
Preference number: 4 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSRHDGK*EPPHVP
Trigger: CGGGACGTGCGGAGGCTCTCACTTTCCGTCATGGCG...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR TCA 90 bp GGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATCATGTTCTCGAAGGTaGTCTGAGGGTAGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: GPAVDDADVADDVLDGFRSCSRR*SEGSGL
Trigger: CAGCCCGCTACCCTCAGATCACCTTCGAGAACATGA...TCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp AGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGACGCGGATGTGGCGGATaGCGTCCTGGATGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: RCFILGSAYQAGWGAGVGRGCGG*RPGWLQ
Trigger: CTGAAGCCATCCAGGACGTCATCCGCCACATCCGCG...TCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR TCA 90 bp CACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTACGCGGATGTGGCGGATaGCGTCCTGGATGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: HRREVAPAKGQKMGPDPVRGCGG*RPGWLQ
Trigger: CTGAAGCCATCCAGGACGTCATCCGCCACATCCGCG...TACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp TCCTGTGACGTGCAGGACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGCCCCGCTGTCTCCTGTaGCGTGCAGGACTGGGATTG +
Preference number: 4 (lower is better)
Translates to: SCDVQDWDCHRREVAPAKPRCLL*RAGLGL
Trigger: CAATCCCAGTCCTGCACGTCACAGGAGACAGCGGGG...CTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTCCTGCACGTCACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp AGGACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGCCCCGCTGTCTCCTGTaGCGTGCAGGACTGGGATTG +
Preference number: 4 (lower is better)
Translates to: RTGIATGGKWHQLRARRWPRCLL*RAGLGL
Trigger: CAATCCCAGTCCTGCACGTCACAGGAGACAGCGGGG...CCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp GTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTACCATCCTCCCCTTTGCGCCCGCTCTCCTaGGCCAGCTTGAAGGCATAC +
Preference number: 4 (lower is better)
Translates to: VAPAKGQKMGPDPVPSSPLRPLS*ASLKAY
Trigger: GTATGCCTTCAAGCTGGCGCAGGAGAGCGGGCGCAA...AGGGGAGGATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTCGGCCGTCACTTTCTTaGGCCCGCTCTCCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSRPSLS*ARSPAP
Trigger: TGGCGCAGGAGAGCGGGCGCAAGAAAGTGACGGCCG...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR GCA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTCTGAGGGTAGCGGGCTaGCACCTCCCTGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSLRVAG*HLPAAL
Trigger: CAGTGCTGCAGGGAGGTGGCAGCCCGCTACCCTCAG...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp CCTAGGGCCAGCCTAGGCCTCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGACACCAGCTGCATGGTaGTGTTATCCACAATCATGT +
Preference number: 4 (lower is better)
Translates to: PRASLGLHGPAVDDADVATPAAW*CYPQSC
Trigger: ACATGATTGTGGATAACACCACCATGCAGCTGGTGT...CGCCACATCCGCGTCATCAACGGCCGGGCCGTGGAGGCCTAGGCTGGCCCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp ACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCGGGTGGCCGTGGGGTTaGCGATGTTCTTATTGGCGA +
Preference number: 4 (lower is better)
Translates to: TSWMASDVVPWPPMSGVCGWPWG*RCSYWR
Trigger: TCGCCAATAAGAACATCGCCAACCCCACGGCCACCC...GCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCTCGGCACACACCACCAGCAGGGTGGCCGTaGGGTTGGCGATGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: PRCPECASVGHRQARHTPPAGWP*GWRCSY
Trigger: ATAAGAACATCGCCAACCCCACGGCCACCCTGCTGG...TGGTGTGTGCCGAGCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCTCGGCACTGGCGGATGACGTCCTaGATGGCTTCAGATGTTGTG +
Preference number: 4 (lower is better)
Translates to: PGPRCPECASVGHRQARHWRMTS*MASDVV
Trigger: CACAACATCTGAAGCCATCCAGGACGTCATCCGCCA...GTGCCGAGCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp AAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGGGCTGGCTGGGGTGCTaGAGTGGGAAGGGGAATCCA +
Preference number: 4 (lower is better)
Translates to: KVLYSGICVPGWLGCWSGGWLGC*SGKGNP
Trigger: TGGATTCCCCTTCCCACTCCAGCACCCCAGCCAGCC...CCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp AGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTACCATCCGGCTGGCTGGGGTGCTaGAGTGGGAAGGGGAATCCA +
Preference number: 4 (lower is better)
Translates to: REVAPAKGQKMGPDPVPSGWLGC*SGKGNP
Trigger: TGGATTCCCCTTCCCACTCCAGCACCCCAGCCAGCC...GGATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGGCTGGCTGGGGTGCTaGAGTGGGAAGGGGAATCCA +
Preference number: 4 (lower is better)
Translates to: GRRCFILGSAYQAGWGAGGWLGC*SGKGNP
Trigger: TGGATTCCCCTTCCCACTCCAGCACCCCAGCCAGCC...TCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp AGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGAATCTGCGTACCAGGCTaGCTGGGGTGCTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RCFILGSAYQAGWGAGVGICVPG*LGCWSG
Trigger: CCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGAT...TCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp CTGGAGTGGGAAGGGGAATCCAAGGAGCAAACCAAGAAGGTCCTAGGGCCAGCCATCTGCGTACCAGGCTaGCTGGGGTGCTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LEWEGESKEQTKKVLGPAICVPG*LGCWSG
Trigger: CCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGAT...GGCTGGCCCTAGGACCTTCTTGGTTTGCTCCTTGGATTCCCCTTCCCACTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CCA 90 bp GACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGGCCACAGGAGGGAAGTaGCACCAGCTAAGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: DWDCHRREVAPAKGQKMGATGGK*HQLRAR
Trigger: TCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGC...CCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp GTGCAGGACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGTCCGGCGGATGGCCATaGTGGCATTGCGAATGTCCT +
Preference number: 4 (lower is better)
Translates to: VQDWDCHRREVAPAKGQKSGGWP*WHCECP
Trigger: AGGACATTCGCAATGCCATCATGGCCATCCGCCGGA...CTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTCCTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp TCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTCCGGCGGATGGCCATaGTGGCATTGCGAATGTCCT +
Preference number: 4 (lower is better)
Translates to: SWMASDVVPWPPMSGVCISGGWP*WHCECP
Trigger: AGGACATTCGCAATGCCATCATGGCCATCCGCCGGA...GATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp CAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGTCTCCTGCGCCAGCTTaGAGGCATACTCGGCAATGC +
Preference number: 4 (lower is better)
Translates to: QMLCPGPRCPECASVGHRSPAPA*RHTRQC
Trigger: GCATTGCCGAGTATGCCTTCAAGCTGGCGCAGGAGA...CCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp GTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCTCATGTTCTCGAAGGTaGTCTGAGGGTAGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: VADDVLDGFRCCALAPDVSCSRR*SEGSGL
Trigger: CAGCCCGCTACCCTCAGATCACCTTCGAGAACATGA...GACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp GGGCCAGATCCAGTACCATCCTCCCCTGGGGGCTGTGGTCAGTGCATGAGGCGGCCGCGCAGACATTGTTaGCGATGTTGCCATAGAGAT +
Preference number: 4 (lower is better)
Translates to: GPDPVPSSPGGCGQCMRRPRRHC*RCCHRD
Trigger: ATCTCTATGGCAACATCGTCAACAATGTCTGCGCGG...CCGCCTCATGCACTGACCACAGCCCCCAGGGGAGGATGGTACTGGATCTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp CTAGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTCGCGGATGTGGCGGATaGCGTCCTGGATGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LGRRCFILGSAYQAGWGARGCGG*RPGWLQ
Trigger: CTGAAGCCATCCAGGACGTCATCCGCCACATCCGCG...AGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR GCA 90 bp ACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCAAGACGGACTTGACATaGAGCATGAGCTCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: TSWMASDVVPWPPMSGVCKTDLT*SMSSGP
Trigger: CGGGCCAGAGCTCATGCTGCATGTCAAGTCCGTCTT...GCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp CGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAATGTCTATGTCCTTGTaGCGGGTCACCACGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RMTSWMASDVVPWPPMSGMSMSL*RVTTPG
Trigger: TCCAGGCGTGGTGACCCGGCACAAGGACATAGACAT...TCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGCCCGCCACACTCTCATaGTCCAGGCTGCTGTACTCG +
Preference number: 4 (lower is better)
Translates to: GEGALFWDLRTRLAGVLEPATLS*SRLLYS
Trigger: CGAGTACAGCAGCCTGGAGCATGAGAGTGTGGCGGG...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR GCA 90 bp GATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGCCCGCCACACTCTCATaGTCCAGGCTGCTGTACTCG +
Preference number: 4 (lower is better)
Translates to: DDADVADDVLDGFRCCALPATLS*SRLLYS
Trigger: CGAGTACAGCAGCCTGGAGCATGAGAGTGTGGCGGG...CAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGTTGCGCCCGCTCTCCTaGGCCAGCTTGAAGGCATAC +
Preference number: 4 (lower is better)
Translates to: REKVLYSGICVPGWLGCWLRPLS*ASLKAY
Trigger: GTATGCCTTCAAGCTGGCGCAGGAGAGCGGGCGCAA...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR GCA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTTGCGCCCGCTCTCCTaGGCCAGCTTGAAGGCATAC +
Preference number: 4 (lower is better)
Translates to: GEGALFWDLRTRLAGVLELRPLS*ASLKAY
Trigger: GTATGCCTTCAAGCTGGCGCAGGAGAGCGGGCGCAA...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR GCA 90 bp GGGCCAGATCCAGTACCATCCTCCCCTGGGGGCTGTGGTCAGTGCATGAGGCGGCTCATTGTCCATGGATaGCAGGACAGCCTTACGGAT +
Preference number: 4 (lower is better)
Translates to: GPDPVPSSPGGCGQCMRRLIVHG*QDSLTD
Trigger: ATCCGTAAGGCTGTCCTGGCATCCATGGACAATGAG...CCGCCTCATGCACTGACCACAGCCCCCAGGGGAGGATGGTACTGGATCTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGTGGCTTCAGATGTTGTaGCCTGGCCCCCGATGTCCG +
Preference number: 4 (lower is better)
Translates to: REKVLYSGICVPGWLGCWWLQML*PGPRCP
Trigger: CGGACATCGGGGGCCAGGGCACAACATCTGAAGCCA...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR GCA 90 bp AAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGTGGCTTCAGATGTTGTaGCCTGGCCCCCGATGTCCG +
Preference number: 4 (lower is better)
Translates to: KVLYSGICVPGWLGCWSGWLQML*PGPRCP
Trigger: CGGACATCGGGGGCCAGGGCACAACATCTGAAGCCA...CCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp AAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGCCCGATGCCATCCCCTaGGATCATGGTCACCGTGTG +
Preference number: 4 (lower is better)
Translates to: KVLYSGICVPGWLGCWSGPDAIP*DHGHRV
Trigger: CACACGGTGACCATGATCCCAGGGGATGGCATCGGG...CCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CCA 90 bp TCCTGTGACGTGCAGGACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGCCCGATGCCATCCCCTaGGATCATGGTCACCGTGTG +
Preference number: 4 (lower is better)
Translates to: SCDVQDWDCHRREVAPAKPDAIP*DHGHRV
Trigger: CACACGGTGACCATGATCCCAGGGGATGGCATCGGG...CTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTCCTGCACGTCACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGATGCAGCATGAGCTCTaGCCCGATGCCATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GEGALFWDLRTRLAGVLEMQHEL*PDAIPW
Trigger: CCAGGGGATGGCATCGGGCCAGAGCTCATGCTGCAT...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CCA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGACCTCCCTGCAGCACTaGAGGAAAAGCCCATCGCCC +
Preference number: 4 (lower is better)
Translates to: REKVLYSGICVPGWLGCWTSLQH*RKSPSP
Trigger: GGGCGATGGGCTTTTCCTCCAGTGCTGCAGGGAGGT...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp TCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCCCAGCAGGGTGGCCGTaGGGTTGGCGATGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: SWMASDVVPWPPMSGVCIPAGWP*GWRCSY
Trigger: ATAAGAACATCGCCAACCCCACGGCCACCCTGCTGG...GATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGTCAGATGTTGTGCCCTaGCCCCCGATGTCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: REKVLYSGICVPGWLGCWSDVVP*PPMSGV
Trigger: CACTCCGGACATCGGGGGCCAGGGCACAACATCTGA...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp AAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGTCAGATGTTGTGCCCTaGCCCCCGATGTCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: KVLYSGICVPGWLGCWSGSDVVP*PPMSGV
Trigger: CACTCCGGACATCGGGGGCCAGGGCACAACATCTGA...CCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp GTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCTGGCGGATGACGTCCTaGATGGCTTCAGATGTTGTG +
Preference number: 4 (lower is better)
Translates to: VVPWPPMSGVCICRTQAGWRMTS*MASDVV
Trigger: CACAACATCTGAAGCCATCCAGGACGTCATCCGCCA...GCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CTAGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTATCTGCGTACCAGGCTaGCTGGGGTGCTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LGRRCFILGSAYQAGWGAICVPG*LGCWSG
Trigger: CCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGAT...AGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp GTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTACCATCCTCCCCTAGTACCATCCTCCCCTaGGGGCTGTGGTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: VAPAKGQKMGPDPVPSSPSTILP*GLWSVH
Trigger: ATGCACTGACCACAGCCCCCAGGGGAGGATGGTACT...AGGGGAGGATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTAGCCACAGGAGGGAAGTaGCACCAGCTAAGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: HRREVAPAKGQKMGPDPVATGGK*HQLRAR
Trigger: TCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGC...TACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCAGCCACTCACTTGAGGTaGTCCAGCATCATGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RPGWLQMLCPGPRCPECAATHLR*SSIMQL
Trigger: CAGCTGCATGATGCTGGACCACCTCAAGTGAGTGGC...TGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370093.5
CDS-3UTR TCA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGCTACCTTCAGCGCCATaGCGGAAAGTGAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GEGALFWDLRTRLAGVLELPSAP*RKVRAS
Trigger: GGAGGCTCTCACTTTCCGTCATGGCGCTGAAGGTAG...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR TCA 90 bp AAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGTCCGGCGGATGGCCATaGTGGCATTGCGAATGTCCT +
Preference number: 4 (lower is better)
Translates to: KVLYSGICVPGWLGCWSGSGGWP*WHCECP
Trigger: AGGACATTCGCAATGCCATCATGGCCATCCGCCGGA...CCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR TCA 90 bp ACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCGGCTCTTACAGTGGATaGCGTTGGCATAGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: TSWMASDVVPWPPMSGVCGSYSG*RWHRGP
Trigger: TGGACCTCTATGCCAACGTCATCCACTGTAAGAGCC...GCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTCTCCTGCGCCAGCTTaGAGGCATACTCGGCAATGC +
Preference number: 4 (lower is better)
Translates to: GEGALFWDLRTRLAGVLESPAPA*RHTRQC
Trigger: GCATTGCCGAGTATGCCTTCAAGCTGGCGCAGGAGA...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR TCA 90 bp GGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTATCTCCTGCGCCAGCTTaGAGGCATACTCGGCAATGC +
Preference number: 4 (lower is better)
Translates to: GWLQMLCPGPRCPECASVSPAPA*RHTRQC
Trigger: GCATTGCCGAGTATGCCTTCAAGCTGGCGCAGGAGA...TACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp GTGCAGGACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGCATCGCCCAGTTTCATaGTGTTGGCCTTGTGCACGG +
Preference number: 4 (lower is better)
Translates to: VQDWDCHRREVAPAKGQKHRPVS*CWPCAR
Trigger: CCGTGCACAAGGCCAACATCATGAAACTGGGCGATG...CTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTCCTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp GTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTACCATCCTCCCCTGATTGGGCATCACCATaGCATCAAACTGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: VAPAKGQKMGPDPVPSSPDWASP*HQTAGA
Trigger: GGCCCCAGCAGTTTGATGTCATGGTGATGCCCAATC...AGGGGAGGATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp GACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCATAGGAGTGCAGCTTaGGGTGGTCCAGCATCATGC +
Preference number: 4 (lower is better)
Translates to: DWDCHRREVAPAKGQKMGHRSAA*GGPASC
Trigger: GCATGATGCTGGACCACCTCAAGCTGCACTCCTATG...CCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370092.7
ENST00000427365.6
CDS-3UTR GCA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGATCATGGTCACCGTGTaGCGCCCGCCATACTTAGCG +
Preference number: 4 (lower is better)
Translates to: REKVLYSGICVPGWLGCWIMVTV*RPPYLA
Trigger: CGCTAAGTATGGCGGGCGGCACACGGTGACCATGAT...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR GCA 90 bp GGAGACTGGGCGGGGCAGCAGGGTAGGGTGCGAGGGGAACCTCACATTCTCATTAGAGGTCCAGGCTGGTaGGAAGGATGTTGTTTCGAG +
Preference number: 4 (lower is better)
Translates to: GDWAGQQGRVRGEPHILIRGPGW*EGCCFE
Trigger: CTCGAAACAACATCCTTCGCACCAGCCTGGACCTCT...AATGAGAATGTGAGGTTCCCCTCGCACCCTACCCTGCTGCCCCGCCCAGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370093.5
CDS-3UTR GCA 90 bp AAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGAGGCATACTCGGCAATaGGCAGGGACTTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: KVLYSGICVPGWLGCWSGRHTRQ*AGTWPW
Trigger: CCAAGGCCAAGTCCCTGCGCATTGCCGAGTATGCCT...CCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR GCA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGGGCCGGGACACCAGCTaGATGGTGGTGTTATCCACA +
Preference number: 4 (lower is better)
Translates to: GEGALFWDLRTRLAGVLEGRDTS*MVVLST
Trigger: TGTGGATAACACCACCATGCAGCTGGTGTCCCGGCC...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR GCA 90 bp CTGGAGTGGGAAGGGGAATCCAAGGAGCAAACCAAGAAGGTCCTAGGGCCAGCCGGCCGGGACACCAGCTaGATGGTGGTGTTATCCACA +
Preference number: 4 (lower is better)
Translates to: LEWEGESKEQTKKVLGPAGRDTS*MVVLST
Trigger: TGTGGATAACACCACCATGCAGCTGGTGTCCCGGCC...GGCTGGCCCTAGGACCTTCTTGGTTTGCTCCTTGGATTCCCCTTCCCACTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGGGCCGGGACACCAGCTaGATGGTGGTGTTATCCACA +
Preference number: 4 (lower is better)
Translates to: REKVLYSGICVPGWLGCWGRDTS*MVVLST
Trigger: TGTGGATAACACCACCATGCAGCTGGTGTCCCGGCC...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR GCA 90 bp GTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCCTCATTGTCCATGGATaGCAGGACAGCCTTACGGAT +
Preference number: 4 (lower is better)
Translates to: VVPWPPMSGVCICRTQAGLIVHG*QDSLTD
Trigger: ATCCGTAAGGCTGTCCTGGCATCCATGGACAATGAG...GCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp GGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGACTCATTGTCCATGGATaGCAGGACAGCCTTACGGAT +
Preference number: 4 (lower is better)
Translates to: GPAVDDADVADDVLDGFRLIVHG*QDSLTD
Trigger: ATCCGTAAGGCTGTCCTGGCATCCATGGACAATGAG...TCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTTGGCTTCAGATGTTGTaGCCTGGCCCCCGATGTCCG +
Preference number: 4 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSWLQML*PGPRCP
Trigger: CGGACATCGGGGGCCAGGGCACAACATCTGAAGCCA...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR GCA 90 bp TCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCCTTTATTCTGGGATCTaGGTACCAGGCTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SWMASDVVPWPPMSGVCILYSGI*VPGWLG
Trigger: CCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAG...GATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370092.7
ENST00000370093.5
CDS-3UTR GCA 90 bp ATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGCTGTCTCCTGTGACGTaGAGGACTGGGATTGCCACA +
Preference number: 4 (lower is better)
Translates to: MWRMTSWMASDVVPWPPMLSPVT*RTGIAT
Trigger: TGTGGCAATCCCAGTCCTGCACGTCACAGGAGACAG...CATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp TCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTCTCTTCAAAGTCCACTaGTACACATGCGTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: STARPLMTRMWRMTSWMALFKVH*YTCVPE
Trigger: TTCAGGCACGCATGTGTACCAGTGGACTTTGAAGAG...AGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCCGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GTACCATCCTCCCCTGGGGGCTGTGGTCAGTGCATGAGGCGGGCTACAGGAGGCAGATTTGTGCGACGGTaGCAGGTTATGGTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: VPSSPGGCGQCMRRATGGRFVRR*QVMVGF
Trigger: GAAACCAACCATAACCTGCCACCGTCGCACAAATCT...GCCTCCTGTAGCCCGCCTCATGCACTGACCACAGCCCCCAGGGGAGGATGGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370093.5
CDS-3UTR CCA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGCCGGGTCACCACGCCTaGAAGGCTCTTACAGTGGAT +
Preference number: 4 (lower is better)
Translates to: REKVLYSGICVPGWLGCWPGHHA*KALTVD
Trigger: ATCCACTGTAAGAGCCTTCCAGGCGTGGTGACCCGG...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CCA 90 bp ACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTACCCGGGTCACCACGCCTaGAAGGCTCTTACAGTGGAT +
Preference number: 4 (lower is better)
Translates to: TGGKWHQLRARRWGQIQYPGHHA*KALTVD
Trigger: ATCCACTGTAAGAGCCTTCCAGGCGTGGTGACCCGG...GTACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTACCTCCCTGCAGCACTaGAGGAAAAGCCCATCGCCC +
Preference number: 4 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSTSLQH*RKSPSP
Trigger: GGGCGATGGGCTTTTCCTCCAGTGCTGCAGGGAGGT...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp TTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCACCTCCCTGCAGCACTaGAGGAAAAGCCCATCGCCC +
Preference number: 4 (lower is better)
Translates to: LMTRMWRMTSWMASDVVPTSLQH*RKSPSP
Trigger: GGGCGATGGGCTTTTCCTCCAGTGCTGCAGGGAGGT...GGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CTCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCACACCAGCTGCATGGTaGTGTTATCCACAATCATGT +
Preference number: 4 (lower is better)
Translates to: LHGPAVDDADVADDVLDGTPAAW*CYPQSC
Trigger: ACATGATTGTGGATAACACCACCATGCAGCTGGTGT...GCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCCGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGGGTGGCCGTGGGGTTaGCGATGTTCTTATTGGCGA +
Preference number: 4 (lower is better)
Translates to: GRRCFILGSAYQAGWGAGGWPWG*RCSYWR
Trigger: TCGCCAATAAGAACATCGCCAACCCCACGGCCACCC...TCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGGGGTGGCCGTGGGGTTaGCGATGTTCTTATTGGCGA +
Preference number: 4 (lower is better)
Translates to: GEGALFWDLRTRLAGVLEGWPWG*RCSYWR
Trigger: TCGCCAATAAGAACATCGCCAACCCCACGGCCACCC...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGCCAGCAGGGTGGCCGTaGGGTTGGCGATGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: REKVLYSGICVPGWLGCWPAGWP*GWRCSY
Trigger: ATAAGAACATCGCCAACCCCACGGCCACCCTGCTGG...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp AGGACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGCCAGCAGGGTGGCCGTaGGGTTGGCGATGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: RTGIATGGKWHQLRARRWPAGWP*GWRCSY
Trigger: ATAAGAACATCGCCAACCCCACGGCCACCCTGCTGG...CCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp TTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTCAGATGTTGTGCCCTaGCCCCCGATGTCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: LMTRMWRMTSWMASDVVPSDVVP*PPMSGV
Trigger: CACTCCGGACATCGGGGGCCAGGGCACAACATCTGA...GGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp TGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCATTGATGACGCGGATGTaGCGGATGACGTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: WDCHRREVAPAKGQKMGPLMTRM*RMTSWM
Trigger: CATCCAGGACGTCATCCGCCACATCCGCGTCATCAA...TGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGAGAAGGTGCTTTATTCTaGGATCTGCGTACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GPAVDDADVADDVLDGFREGALF*DLRTRL
Trigger: CAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTC...TCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CCA 90 bp AGGACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGAGTACCATCCTCCCCTaGGGGCTGTGGTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: RTGIATGGKWHQLRARRWSTILP*GLWSVH
Trigger: ATGCACTGACCACAGCCCCCAGGGGAGGATGGTACT...CCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGTGTGACGTGCAGGACTaGGATTGCCACAGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: QMLCPGPRCPECASVGHRCDVQD*DCHRRE
Trigger: TTCCCTCCTGTGGCAATCCCAGTCCTGCACGTCACA...CCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp GTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTACCATCCTCCCCTGGCTCTTACAGTGGATaGCGTTGGCATAGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: VAPAKGQKMGPDPVPSSPGSYSG*RWHRGP
Trigger: TGGACCTCTATGCCAACGTCATCCACTGTAAGAGCC...AGGGGAGGATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp TGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGGCTCTTACAGTGGATaGCGTTGGCATAGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: WDCHRREVAPAKGQKMGPGSYSG*RWHRGP
Trigger: TGGACCTCTATGCCAACGTCATCCACTGTAAGAGCC...TGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp CTAGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTTCTCCTGCGCCAGCTTaGAGGCATACTCGGCAATGC +
Preference number: 4 (lower is better)
Translates to: LGRRCFILGSAYQAGWGASPAPA*RHTRQC
Trigger: GCATTGCCGAGTATGCCTTCAAGCTGGCGCAGGAGA...AGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR TCA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGCATCGCCCAGTTTCATaGTGTTGGCCTTGTGCACGG +
Preference number: 4 (lower is better)
Translates to: REKVLYSGICVPGWLGCWHRPVS*CWPCAR
Trigger: CCGTGCACAAGGCCAACATCATGAAACTGGGCGATG...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR TCA 90 bp ACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTACCATCGCCCAGTTTCATaGTGTTGGCCTTGTGCACGG +
Preference number: 4 (lower is better)
Translates to: TGGKWHQLRARRWGQIQYHRPVS*CWPCAR
Trigger: CCGTGCACAAGGCCAACATCATGAAACTGGGCGATG...GTACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp AGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGATCATGTTCTCGAAGGTaGTCTGAGGGTAGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: RCFILGSAYQAGWGAGVGSCSRR*SEGSGL
Trigger: CAGCCCGCTACCCTCAGATCACCTTCGAGAACATGA...TCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR TCA 90 bp AGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGAGATTGGGCATCACCATaGCATCAAACTGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: RCFILGSAYQAGWGAGVGDWASP*HQTAGA
Trigger: GGCCCCAGCAGTTTGATGTCATGGTGATGCCCAATC...TCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR TCA 90 bp CACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTAGATTGGGCATCACCATaGCATCAAACTGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: HRREVAPAKGQKMGPDPVDWASP*HQTAGA
Trigger: GGCCCCAGCAGTTTGATGTCATGGTGATGCCCAATC...TACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGCATAGGAGTGCAGCTTaGGGTGGTCCAGCATCATGC +
Preference number: 4 (lower is better)
Translates to: GEGALFWDLRTRLAGVLEHRSAA*GGPASC
Trigger: GCATGATGCTGGACCACCTCAAGCTGCACTCCTATG...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000454076.5
CDS-3UTR TCA 90 bp CTGGAGTGGGAAGGGGAATCCAAGGAGCAAACCAAGAAGGTCCTAGGGCCAGCCCATAGGAGTGCAGCTTaGGGTGGTCCAGCATCATGC +
Preference number: 4 (lower is better)
Translates to: LEWEGESKEQTKKVLGPAHRSAA*GGPASC
Trigger: GCATGATGCTGGACCACCTCAAGCTGCACTCCTATG...GGCTGGCCCTAGGACCTTCTTGGTTTGCTCCTTGGATTCCCCTTCCCACTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370092.7
ENST00000427365.6
CDS-3UTR GCA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAAGACGGACTTGACATaGAGCATGAGCTCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: REKVLYSGICVPGWLGCWKTDLT*SMSSGP
Trigger: CGGGCCAGAGCTCATGCTGCATGTCAAGTCCGTCTT...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR GCA 90 bp GATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGAAGACGGACTTGACATaGAGCATGAGCTCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: DDADVADDVLDGFRCCALKTDLT*SMSSGP
Trigger: CGGGCCAGAGCTCATGCTGCATGTCAAGTCCGTCTT...CAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp CAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGGTCCACTGGTACACATaGGTGCCTGAAGACGGACTT +
Preference number: 4 (lower is better)
Translates to: QMLCPGPRCPECASVGHRVHWYT*VPEDGL
Trigger: AAGTCCGTCTTCAGGCACGCATGTGTACCAGTGGAC...CCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGATGTCTATGTCCTTGTaGCGGGTCACCACGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GEGALFWDLRTRLAGVLEMSMSL*RVTTPG
Trigger: TCCAGGCGTGGTGACCCGGCACAAGGACATAGACAT...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR GCA 90 bp CTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACATGTCTATGTCCTTGTaGCGGGTCACCACGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LQMLCPGPRCPECASVGHMSMSL*RVTTPG
Trigger: TCCAGGCGTGGTGACCCGGCACAAGGACATAGACAT...GTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp GGAGTGGGAAGGGGAATCCAAGGAGCAAACCAAGAAGGTCCTAGGGCCAGCCTAAGGCATACTCGGCAATaGGCAGGGACTTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GVGRGIQGANQEGPRASLRHTRQ*AGTWPW
Trigger: CCAAGGCCAAGTCCCTGCGCATTGCCGAGTATGCCT...TAGGCTGGCCCTAGGACCTTCTTGGTTTGCTCCTTGGATTCCCCTTCCCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTAGGCATACTCGGCAATaGGCAGGGACTTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSRHTRQ*AGTWPW
Trigger: CCAAGGCCAAGTCCCTGCGCATTGCCGAGTATGCCT...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR GCA 90 bp TTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCGGCCGGGACACCAGCTaGATGGTGGTGTTATCCACA +
Preference number: 4 (lower is better)
Translates to: LMTRMWRMTSWMASDVVPGRDTS*MVVLST
Trigger: TGTGGATAACACCACCATGCAGCTGGTGTCCCGGCC...GGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp GGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGACTTTATTCTGGGATCTaGGTACCAGGCTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GRRCFILGSAYQAGWGAGLYSGI*VPGWLG
Trigger: CCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAG...TCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR GCA 90 bp AGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGACTTTATTCTGGGATCTaGGTACCAGGCTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RCFILGSAYQAGWGAGVGLYSGI*VPGWLG
Trigger: CCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAG...TCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR GCA 90 bp AGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTACCATCCCTGTCTCCTGTGACGTaGAGGACTGGGATTGCCACA +
Preference number: 4 (lower is better)
Translates to: REVAPAKGQKMGPDPVPSLSPVT*RTGIAT
Trigger: TGTGGCAATCCCAGTCCTGCACGTCACAGGAGACAG...GGATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp ACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTACCCGATGTCCGGAGTGTaGATCTGTAGGACACAGGCA +
Preference number: 4 (lower is better)
Translates to: TGGKWHQLRARRWGQIQYPMSGV*ICRTQA
Trigger: TGCCTGTGTCCTACAGATGCACACTCCGGACATCGG...GTACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp GGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGACCGATGTCCGGAGTGTaGATCTGTAGGACACAGGCA +
Preference number: 4 (lower is better)
Translates to: GRRCFILGSAYQAGWGAGPMSGV*ICRTQA
Trigger: TGCCTGTGTCCTACAGATGCACACTCCGGACATCGG...TCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp GGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGAGTGGCAGGTTATGGTTaGTTTCGATGTTGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: GPAVDDADVADDVLDGFRVAGYG*FRCCPS
Trigger: TGAAGGGCAACATCGAAACCAACCATAACCTGCCAC...TCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GGAGTGGGAAGGGGAATCCAAGGAGCAAACCAAGAAGGTCCTAGGGCCAGCCTACCGGGTCACCACGCCTaGAAGGCTCTTACAGTGGAT +
Preference number: 4 (lower is better)
Translates to: GVGRGIQGANQEGPRASLPGHHA*KALTVD
Trigger: ATCCACTGTAAGAGCCTTCCAGGCGTGGTGACCCGG...TAGGCTGGCCCTAGGACCTTCTTGGTTTGCTCCTTGGATTCCCCTTCCCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp TTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCGGGTGGCCGTGGGGTTaGCGATGTTCTTATTGGCGA +
Preference number: 4 (lower is better)
Translates to: LMTRMWRMTSWMASDVVPGWPWG*RCSYWR
Trigger: TCGCCAATAAGAACATCGCCAACCCCACGGCCACCC...GGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTCCAGCAGGGTGGCCGTaGGGTTGGCGATGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSPAGWP*GWRCSY
Trigger: ATAAGAACATCGCCAACCCCACGGCCACCCTGCTGG...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp AGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGAGGACAGCCTTACGGATaGAGGTGGCATAGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: RCFILGSAYQAGWGAGVGGQPYG*RWHRSA
Trigger: TGCACTCCTATGCCACCTCCATCCGTAAGGCTGTCC...TCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp AGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTACCATCCGGACAGCCTTACGGATaGAGGTGGCATAGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: REVAPAKGQKMGPDPVPSGQPYG*RWHRSA
Trigger: TGCACTCCTATGCCACCTCCATCCGTAAGGCTGTCC...GGATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGGACAGCCTTACGGATaGAGGTGGCATAGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: GRRCFILGSAYQAGWGAGGQPYG*RWHRSA
Trigger: TGCACTCCTATGCCACCTCCATCCGTAAGGCTGTCC...TCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp GGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGATTGATGACGCGGATGTaGCGGATGACGTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: GRRCFILGSAYQAGWGAGLMTRM*RMTSWM
Trigger: CATCCAGGACGTCATCCGCCACATCCGCGTCATCAA...TCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR TCA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGGGCTCTTACAGTGGATaGCGTTGGCATAGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GEGALFWDLRTRLAGVLEGSYSG*RWHRGP
Trigger: TGGACCTCTATGCCAACGTCATCCACTGTAAGAGCC...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR TCA 90 bp GTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCTGTTCTCCCGGACAATaGGGATGTCTATGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VADDVLDGFRCCALAPDVCSPGQ*GCLCPC
Trigger: ACAAGGACATAGACATCCTCATTGTCCGGGAGAACA...GACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp CGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGATGTTCTCCCGGACAATaGGGATGTCTATGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: RMTSWMASDVVPWPPMSGCSPGQ*GCLCPC
Trigger: ACAAGGACATAGACATCCTCATTGTCCGGGAGAACA...TCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp GCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTCATCGCCCAGTTTCATaGTGTTGGCCTTGTGCACGG +
Preference number: 4 (lower is better)
Translates to: AVDDADVADDVLDGFRCCHRPVS*CWPCAR
Trigger: CCGTGCACAAGGCCAACATCATGAAACTGGGCGATG...ACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTCATCGCCCAGTTTCATaGTGTTGGCCTTGTGCACGG +
Preference number: 4 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSHRPVS*CWPCAR
Trigger: CCGTGCACAAGGCCAACATCATGAAACTGGGCGATG...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR TCA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTTCATGTTCTCGAAGGTaGTCTGAGGGTAGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSSCSRR*SEGSGL
Trigger: CAGCCCGCTACCCTCAGATCACCTTCGAGAACATGA...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR TCA 90 bp CTAGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGATTGGGCATCACCATaGCATCAAACTGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LGRRCFILGSAYQAGWGADWASP*HQTAGA
Trigger: GGCCCCAGCAGTTTGATGTCATGGTGATGCCCAATC...AGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR TCA 90 bp CTAGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTCATAGGAGTGCAGCTTaGGGTGGTCCAGCATCATGC +
Preference number: 4 (lower is better)
Translates to: LGRRCFILGSAYQAGWGAHRSAA*GGPASC
Trigger: GCATGATGCTGGACCACCTCAAGCTGCACTCCTATG...AGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370092.7
ENST00000454076.5
CDS-3UTR GCA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGGTCCACTGGTACACATaGGTGCCTGAAGACGGACTT +
Preference number: 4 (lower is better)
Translates to: REKVLYSGICVPGWLGCWVHWYT*VPEDGL
Trigger: AAGTCCGTCTTCAGGCACGCATGTGTACCAGTGGAC...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR GCA 90 bp AGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGAGTCCACTGGTACACATaGGTGCCTGAAGACGGACTT +
Preference number: 4 (lower is better)
Translates to: RCFILGSAYQAGWGAGVGVHWYT*VPEDGL
Trigger: AAGTCCGTCTTCAGGCACGCATGTGTACCAGTGGAC...TCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR GCA 90 bp CACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTAGTCCACTGGTACACATaGGTGCCTGAAGACGGACTT +
Preference number: 4 (lower is better)
Translates to: HRREVAPAKGQKMGPDPVVHWYT*VPEDGL
Trigger: AAGTCCGTCTTCAGGCACGCATGTGTACCAGTGGAC...TACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp GGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGGCATTGGAACTCACGTaGACCTCTTCAAAGTCCACT +
Preference number: 4 (lower is better)
Translates to: GIATGGKWHQLRARRWGQALELT*TSSKST
Trigger: AGTGGACTTTGAAGAGGTGCACGTGAGTTCCAATGC...CTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp AAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGAGAGGTCCAGGCTGGTaGGAAGGATGTTGTTTCGAG +
Preference number: 4 (lower is better)
Translates to: KVLYSGICVPGWLGCWSGRGPGW*EGCCFE
Trigger: CTCGAAACAACATCCTTCGCACCAGCCTGGACCTCT...CCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR GCA 90 bp AGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTACCATCCAGAGGTCCAGGCTGGTaGGAAGGATGTTGTTTCGAG +
Preference number: 4 (lower is better)
Translates to: REVAPAKGQKMGPDPVPSRGPGW*EGCCFE
Trigger: CTCGAAACAACATCCTTCGCACCAGCCTGGACCTCT...GGATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp GGAGTGGGAAGGGGAATCCAAGGAGCAAACCAAGAAGGTCCTAGGGCCAGCCTACTGTCTCCTGTGACGTaGAGGACTGGGATTGCCACA +
Preference number: 4 (lower is better)
Translates to: GVGRGIQGANQEGPRASLLSPVT*RTGIAT
Trigger: TGTGGCAATCCCAGTCCTGCACGTCACAGGAGACAG...TAGGCTGGCCCTAGGACCTTCTTGGTTTGCTCCTTGGATTCCCCTTCCCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp CTAGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTCCGATGTCCGGAGTGTaGATCTGTAGGACACAGGCA +
Preference number: 4 (lower is better)
Translates to: LGRRCFILGSAYQAGWGAPMSGV*ICRTQA
Trigger: TGCCTGTGTCCTACAGATGCACACTCCGGACATCGG...AGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp GTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCCTCTTCATCAGCATTaGAACTCACGTGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: VADDVLDGFRCCALAPDVPLHQH*NSRAPL
Trigger: AAGAGGTGCACGTGAGTTCCAATGCTGATGAAGAGG...GACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGACGGTGGCAGGTTATaGTTGGTTTCGATGTTGCCC +
Preference number: 4 (lower is better)
Translates to: GRRCFILGSAYQAGWGAGDGGRL*LVSMLP
Trigger: GGGCAACATCGAAACCAACCATAACCTGCCACCGTC...TCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CCA 90 bp GGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGACGGTGGCAGGTTATaGTTGGTTTCGATGTTGCCC +
Preference number: 4 (lower is better)
Translates to: GWLQMLCPGPRCPECASVDGGRL*LVSMLP
Trigger: GGGCAACATCGAAACCAACCATAACCTGCCACCGTC...TACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCTCGGCACACACCATGGCGATGTTCTTATTaGCGATACTCTTGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: PRCPECASVGHRQARHTPWRCSY*RYSCRC
Trigger: ACACCGGCAAGAGTATCGCCAATAAGAACATCGCCA...TGGTGTGTGCCGAGCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGTGGCGGATGACGTCCTaGATGGCTTCAGATGTTGTG +
Preference number: 4 (lower is better)
Translates to: REKVLYSGICVPGWLGCWWRMTS*MASDVV
Trigger: CACAACATCTGAAGCCATCCAGGACGTCATCCGCCA...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp GGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGATGGCGGATGACGTCCTaGATGGCTTCAGATGTTGTG +
Preference number: 4 (lower is better)
Translates to: GRRCFILGSAYQAGWGAGWRMTS*MASDVV
Trigger: CACAACATCTGAAGCCATCCAGGACGTCATCCGCCA...TCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTTTGATGACGCGGATGTaGCGGATGACGTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSLMTRM*RMTSWM
Trigger: CATCCAGGACGTCATCCGCCACATCCGCGTCATCAA...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp CTAGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTTTGATGACGCGGATGTaGCGGATGACGTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: LGRRCFILGSAYQAGWGALMTRM*RMTSWM
Trigger: CATCCAGGACGTCATCCGCCACATCCGCGTCATCAA...AGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp AGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTACCATCCCTAAGGGCCAGAAGATaGGGCCAGATCCAGTACCAT +
Preference number: 4 (lower is better)
Translates to: REVAPAKGQKMGPDPVPSLRARR*GQIQYH
Trigger: ATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAG...GGATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTCTAAGGGCCAGAAGATaGGGCCAGATCCAGTACCAT +
Preference number: 4 (lower is better)
Translates to: RPLMTRMWRMTSWMASDVLRARR*GQIQYH
Trigger: ATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAG...AACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp TGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCATGTTCTCCCGGACAATaGGGATGTCTATGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: WDCHRREVAPAKGQKMGPCSPGQ*GCLCPC
Trigger: ACAAGGACATAGACATCCTCATTGTCCGGGAGAACA...TGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGCCGCGCAGACATTGTTaGCGATGTTGCCATAGAGAT +
Preference number: 4 (lower is better)
Translates to: REKVLYSGICVPGWLGCWPRRHC*RCCHRD
Trigger: ATCTCTATGGCAACATCGTCAACAATGTCTGCGCGG...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR TCA 90 bp AGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGACCGCGCAGACATTGTTaGCGATGTTGCCATAGAGAT +
Preference number: 4 (lower is better)
Translates to: RCFILGSAYQAGWGAGVGPRRHC*RCCHRD
Trigger: ATCTCTATGGCAACATCGTCAACAATGTCTGCGCGG...TCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR GCA 90 bp GGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGACTCATTGTCCATGGATaGCAGGACAGCCTTACGGAT +
Preference number: 4 (lower is better)
Translates to: GRRCFILGSAYQAGWGAGLIVHG*QDSLTD
Trigger: ATCCGTAAGGCTGTCCTGGCATCCATGGACAATGAG...TCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp GTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTACCATCCTCCCCTCTCTTCAAAGTCCACTaGTACACATGCGTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: VAPAKGQKMGPDPVPSSPLFKVH*YTCVPE
Trigger: TTCAGGCACGCATGTGTACCAGTGGACTTTGAAGAG...AGGGGAGGATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp TCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCCCTCTTCATCAGCATTaGAACTCACGTGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: SWMASDVVPWPPMSGVCIPLHQH*NSRAPL
Trigger: AAGAGGTGCACGTGAGTTCCAATGCTGATGAAGAGG...GATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGACGGTGGCAGGTTATaGTTGGTTTCGATGTTGCCC +
Preference number: 4 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSDGGRL*LVSMLP
Trigger: GGGCAACATCGAAACCAACCATAACCTGCCACCGTC...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CCA 90 bp AAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGGGGACACCAGCTGCATaGTGGTGTTATCCACAATCA +
Preference number: 4 (lower is better)
Translates to: KVLYSGICVPGWLGCWSGGTPAA*WCYPQS
Trigger: TGATTGTGGATAACACCACCATGCAGCTGGTGTCCC...CCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp GGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGGACACCAGCTGCATaGTGGTGTTATCCACAATCA +
Preference number: 4 (lower is better)
Translates to: GWLQMLCPGPRCPECASVGTPAA*WCYPQS
Trigger: TGATTGTGGATAACACCACCATGCAGCTGGTGTCCC...TACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp AGGACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGGACACCAGCTGCATaGTGGTGTTATCCACAATCA +
Preference number: 4 (lower is better)
Translates to: RTGIATGGKWHQLRARRWGTPAA*WCYPQS
Trigger: TGATTGTGGATAACACCACCATGCAGCTGGTGTCCC...CCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CTGGAGTGGGAAGGGGAATCCAAGGAGCAAACCAAGAAGGTCCTAGGGCCAGCCGGGACACCAGCTGCATaGTGGTGTTATCCACAATCA +
Preference number: 4 (lower is better)
Translates to: LEWEGESKEQTKKVLGPAGTPAA*WCYPQS
Trigger: TGATTGTGGATAACACCACCATGCAGCTGGTGTCCC...GGCTGGCCCTAGGACCTTCTTGGTTTGCTCCTTGGATTCCCCTTCCCACTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGGGGACACCAGCTGCATaGTGGTGTTATCCACAATCA +
Preference number: 4 (lower is better)
Translates to: GEGALFWDLRTRLAGVLEGTPAA*WCYPQS
Trigger: TGATTGTGGATAACACCACCATGCAGCTGGTGTCCC...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp TCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGGCGATGTTCTTATTaGCGATACTCTTGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: SWMASDVVPWPPMSGVCIWRCSY*RYSCRC
Trigger: ACACCGGCAAGAGTATCGCCAATAAGAACATCGCCA...GATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp TTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCGGATGACGTCCTaGATGGCTTCAGATGTTGTG +
Preference number: 4 (lower is better)
Translates to: LMTRMWRMTSWMASDVVPWRMTS*MASDVV
Trigger: CACAACATCTGAAGCCATCCAGGACGTCATCCGCCA...GGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGAAGGTGCTTTATTCTaGGATCTGCGTACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GRRCFILGSAYQAGWGAGEGALF*DLRTRL
Trigger: CAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTC...TCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp GCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTCTAAGGGCCAGAAGATaGGGCCAGATCCAGTACCAT +
Preference number: 4 (lower is better)
Translates to: AVDDADVADDVLDGFRCCLRARR*GQIQYH
Trigger: ATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAG...ACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR TCA 90 bp CGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCAAGGAATTGTTTGTTCTaGAAAGATGTTCCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: RPGWLQMLCPGPRCPECARNCLF*KDVPRG
Trigger: CCCTCGAGGAACATCTTTTCAGAACAAACAATTCCT...TGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370092.7
ENST00000370093.5
CDS-3UTR TCA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGTTCTCCCGGACAATaGGGATGTCTATGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GEGALFWDLRTRLAGVLECSPGQ*GCLCPC
Trigger: ACAAGGACATAGACATCCTCATTGTCCGGGAGAACA...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR TCA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTCCGCGCAGACATTGTTaGCGATGTTGCCATAGAGAT +
Preference number: 4 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSPRRHC*RCCHRD
Trigger: ATCTCTATGGCAACATCGTCAACAATGTCTGCGCGG...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR GCA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGGCATTGGAACTCACGTaGACCTCTTCAAAGTCCACT +
Preference number: 4 (lower is better)
Translates to: REKVLYSGICVPGWLGCWALELT*TSSKST
Trigger: AGTGGACTTTGAAGAGGTGCACGTGAGTTCCAATGC...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR GCA 90 bp AGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGAGCATTGGAACTCACGTaGACCTCTTCAAAGTCCACT +
Preference number: 4 (lower is better)
Translates to: RCFILGSAYQAGWGAGVGALELT*TSSKST
Trigger: AGTGGACTTTGAAGAGGTGCACGTGAGTTCCAATGC...TCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR GCA 90 bp CTGGAGTGGGAAGGGGAATCCAAGGAGCAAACCAAGAAGGTCCTAGGGCCAGCCGCATTGGAACTCACGTaGACCTCTTCAAAGTCCACT +
Preference number: 4 (lower is better)
Translates to: LEWEGESKEQTKKVLGPAALELT*TSSKST
Trigger: AGTGGACTTTGAAGAGGTGCACGTGAGTTCCAATGC...GGCTGGCCCTAGGACCTTCTTGGTTTGCTCCTTGGATTCCCCTTCCCACTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR GCA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGTTGTTTCGAGATTTGTaGGACGGTGGCAGGTTATGG +
Preference number: 4 (lower is better)
Translates to: REKVLYSGICVPGWLGCWLFRDL*DGGRLW
Trigger: CCATAACCTGCCACCGTCGCACAAATCTCGAAACAA...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR GCA 90 bp AGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGATTGTTTCGAGATTTGTaGGACGGTGGCAGGTTATGG +
Preference number: 4 (lower is better)
Translates to: RCFILGSAYQAGWGAGVGLFRDL*DGGRLW
Trigger: CCATAACCTGCCACCGTCGCACAAATCTCGAAACAA...TCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR GCA 90 bp GGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTATTGTTTCGAGATTTGTaGGACGGTGGCAGGTTATGG +
Preference number: 4 (lower is better)
Translates to: GWLQMLCPGPRCPECASVLFRDL*DGGRLW
Trigger: CCATAACCTGCCACCGTCGCACAAATCTCGAAACAA...TACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGCTCTTCAAAGTCCACTaGTACACATGCGTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: REKVLYSGICVPGWLGCWLFKVH*YTCVPE
Trigger: TTCAGGCACGCATGTGTACCAGTGGACTTTGAAGAG...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CCA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGCTCTTCAAAGTCCACTaGTACACATGCGTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: GEGALFWDLRTRLAGVLELFKVH*YTCVPE
Trigger: TTCAGGCACGCATGTGTACCAGTGGACTTTGAAGAG...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CCA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGCCTCTTCATCAGCATTaGAACTCACGTGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: GEGALFWDLRTRLAGVLEPLHQH*NSRAPL
Trigger: AAGAGGTGCACGTGAGTTCCAATGCTGATGAAGAGG...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CCA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGCCTCTTCATCAGCATTaGAACTCACGTGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: REKVLYSGICVPGWLGCWPLHQH*NSRAPL
Trigger: AAGAGGTGCACGTGAGTTCCAATGCTGATGAAGAGG...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CCA 90 bp CTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACGTGGCAGGTTATGGTTaGTTTCGATGTTGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: LQMLCPGPRCPECASVGHVAGYG*FRCCPS
Trigger: TGAAGGGCAACATCGAAACCAACCATAACCTGCCAC...GTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGTGGCAGGTTATGGTTaGTTTCGATGTTGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: DDADVADDVLDGFRCCALVAGYG*FRCCPS
Trigger: TGAAGGGCAACATCGAAACCAACCATAACCTGCCAC...CAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp AGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGAAGATTTGTGCGACGGTaGCAGGTTATGGTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: RCFILGSAYQAGWGAGVGRFVRR*QVMVGF
Trigger: GAAACCAACCATAACCTGCCACCGTCGCACAAATCT...TCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CCA 90 bp TCCTGTGACGTGCAGGACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGAGATTTGTGCGACGGTaGCAGGTTATGGTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: SCDVQDWDCHRREVAPAKRFVRR*QVMVGF
Trigger: GAAACCAACCATAACCTGCCACCGTCGCACAAATCT...CTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTCCTGCACGTCACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp CTGGAGTGGGAAGGGGAATCCAAGGAGCAAACCAAGAAGGTCCTAGGGCCAGCCAGATTTGTGCGACGGTaGCAGGTTATGGTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LEWEGESKEQTKKVLGPARFVRR*QVMVGF
Trigger: GAAACCAACCATAACCTGCCACCGTCGCACAAATCT...GGCTGGCCCTAGGACCTTCTTGGTTTGCTCCTTGGATTCCCCTTCCCACTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGATGGCGATGTTCTTATTaGCGATACTCTTGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: GRRCFILGSAYQAGWGAGWRCSY*RYSCRC
Trigger: ACACCGGCAAGAGTATCGCCAATAAGAACATCGCCA...TCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CCA 90 bp AGGACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGTGGCGATGTTCTTATTaGCGATACTCTTGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: RTGIATGGKWHQLRARRWWRCSY*RYSCRC
Trigger: ACACCGGCAAGAGTATCGCCAATAAGAACATCGCCA...CCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGAAGGTGCTTTATTCTaGGATCTGCGTACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSEGALF*DLRTRL
Trigger: CAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTC...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR TCA 90 bp TGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAAGGAATTGTTTGTTCTaGAAAGATGTTCCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: CHRREVAPAKGQKMGPDPRNCLF*KDVPRG
Trigger: CCCTCGAGGAACATCTTTTCAGAACAAACAATTCCT...TGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370092.7
ENST00000370093.5
CDS-3UTR GCA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTTTGTTTCGAGATTTGTaGGACGGTGGCAGGTTATGG +
Preference number: 4 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSLFRDL*DGGRLW
Trigger: CCATAACCTGCCACCGTCGCACAAATCTCGAAACAA...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CCA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGTGGCAGGTTATGGTTaGTTTCGATGTTGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSVAGYG*FRCCPS
Trigger: TGAAGGGCAACATCGAAACCAACCATAACCTGCCAC...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CCA 90 bp CGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTACACCAGCTGCATGGTaGTGTTATCCACAATCATGT +
Preference number: 4 (lower is better)
Translates to: RPLMTRMWRMTSWMASDVTPAAW*CYPQSC
Trigger: ACATGATTGTGGATAACACCACCATGCAGCTGGTGT...AACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CCA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGACACCAGCTGCATGGTaGTGTTATCCACAATCATGT +
Preference number: 4 (lower is better)
Translates to: GEGALFWDLRTRLAGVLETPAAW*CYPQSC
Trigger: ACATGATTGTGGATAACACCACCATGCAGCTGGTGT...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR TCA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGAGGAATTGTTTGTTCTaGAAAGATGTTCCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: GEGALFWDLRTRLAGVLERNCLF*KDVPRG
Trigger: CCCTCGAGGAACATCTTTTCAGAACAAACAATTCCT...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CCA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTACACCAGCTGCATGGTaGTGTTATCCACAATCATGT +
Preference number: 4 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSTPAAW*CYPQSC
Trigger: ACATGATTGTGGATAACACCACCATGCAGCTGGTGT...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS CCA 90 bp GAGATGGCTTCATGGCCTCATCTCCCAGGGACGGCAGAGAAGGGCTaGCCCGAGCACCGCCTTCGCGGCGCTGCCGGCGACGGTCGCTAC +
Preference number: 5 (lower is better)
Translates to: EMASWPHLPGTAEKG*PEHRLRGAAGDGRY
Trigger: GTAGCGACCGTCGCCGGCAGCGCCGCGAAGGCGGTGCTCGGGCCAGCCCTTCTCTGCCGTCCCTGGGAGATGAGGCCATGAAGCCATCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461215.2
CDS TCA 90 bp CCGCCTTCGCGGCGCTGCCGGCGACGGTCGCTACCTTCAGCGCCATaGCGGAAAGTGAGAGCCTCCGCACGTCCCGACACGCAGATACCG +
Preference number: 5 (lower is better)
Translates to: PPSRRCRRRSLPSAP*RKVRASARPDTQIP
Trigger: CGGTATCTGCGTGTCGGGACGTGCGGAGGCTCTCACTTTCCGTCATGGCGCTGAAGGTAGCGACCGTCGCCGGCAGCGCCGCGAAGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000619865.4
CDS GCA 90 bp CACGTCCCGACACGCAGATACCGCTCTCGCGAGAGTTCGACGGGGTaGGAAGTTTCGGGGACAGGCGCGGACCCGGTACTGCGCACGCGC +
Preference number: 5 (lower is better)
Translates to: HVPTRRYRSRESSTG*EVSGTGADPVLRTR
Trigger: GCGCGTGCGCAGTACCGGGTCCGCGCCTGTCCCCGAAACTTCGCACCCCGTCGAACTCTCGCGAGAGCGGTATCTGCGTGTCGGGACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370092.7
ENST00000619865.4
CDS-3UTR CAA 90 bp GCCAGATCCAGTACCATCCTCCCCTGGGGGCTGTGGTCAGTGCATGAGGCGGGCTCCACGGCCCGGCCGTaGATGACGCGGATGTGGCGG +
Preference number: 5 (lower is better)
Translates to: ARSSTILPWGLWSVHEAGSTARP*MTRMWR
Trigger: CCGCCACATCCGCGTCATCAACGGCCGGGCCGTGGA...GCCCGCCTCATGCACTGACCACAGCCCCCAGGGGAGGATGGTACTGGATCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370093.5
CDS-3UTR CAA 90 bp CCTAGGGCCAGCCTAGGCCTCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGCGTGCAGGACTGGGATaGCCACAGGAGGGAAGTGGC +
Preference number: 5 (lower is better)
Translates to: PRASLGLHGPAVDDADVARAGLG*PQEGSG
Trigger: GCCACTTCCCTCCTGTGGCAATCCCAGTCCTGCACG...CGCCACATCCGCGTCATCAACGGCCGGGCCGTGGAGGCCTAGGCTGGCCCTAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp GGAGACTGGGCGGGGCAGCAGGGTAGGGTGCGAGGGGAACCTCACATTCTCATTGGGCTGGCCAGGGGCTaGCGGGGCACTGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: GDWAGQQGRVRGEPHILIGLARG*RGTGSH
Trigger: GTGGCTCCCAGTGCCCCGCAAGCCCCTGGCCAGCCC...AATGAGAATGTGAGGTTCCCCTCGCACCCTACCCTGCTGCCCCGCCCAGTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370093.5
CDS TCA 90 bp GGCGCTGCCGGCGACGGTCGCTACCTTCAGCGCCATGACGGAAAGTaGGAGCCTCCGCACGTCCCGACACGCAGATACCGCTCTCGCGAG +
Preference number: 5 (lower is better)
Translates to: GAAGDGRYLQRHDGK*EPPHVPTRRYRSRE
Trigger: CTCGCGAGAGCGGTATCTGCGTGTCGGGACGTGCGGAGGCTCTCACTTTCCGTCATGGCGCTGAAGGTAGCGACCGTCGCCGGCAGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000619865.4
CDS-3UTR CAA 90 bp CCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCTCGGCACACGGCCGTCACTTTCTaGCGCCCGCTCTCCTGCGCC +
Preference number: 5 (lower is better)
Translates to: PGPRCPECASVGHRQARHTAVTF*RPLSCA
Trigger: GGCGCAGGAGAGCGGGCGCAAGAAAGTGACGGCCGT...GTGCCGAGCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp CTCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCCGTGCAGGACTGGGATaGCCACAGGAGGGAAGTGGC +
Preference number: 5 (lower is better)
Translates to: LHGPAVDDADVADDVLDGRAGLG*PQEGSG
Trigger: GCCACTTCCCTCCTGTGGCAATCCCAGTCCTGCACG...GCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCCGTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS CCA 90 bp GCCCAGGCCAGTCTGGCGGGATCACAGGCCATGGGACGCAAGGCCTaGGCTTACAGGTCGTCTTGCCATGGCCTCACCGAGTGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: AQASLAGSQAMGRKA*AYRSSCHGLTECFW
Trigger: CCAGAAGCACTCGGTGAGGCCATGGCAAGACGACCTGTAAGCCCAGGCCTTGCGTCCCATGGCCTGTGATCCCGCCAGACTGGCCTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491235.1
CDS-3UTR CAA 90 bp CCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCTCGGCACCGTGCAGGACTGGGATaGCCACAGGAGGGAAGTGGC +
Preference number: 5 (lower is better)
Translates to: PGPRCPECASVGHRQARHRAGLG*PQEGSG
Trigger: GCCACTTCCCTCCTGTGGCAATCCCAGTCCTGCACG...GTGCCGAGCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS CCA 90 bp GCCTGGGCTTACAGGTCGTCTTGCCATGGCCTCACCGAGTGCTTCTaGGCGCAATGCCCCTCTTGGCACAAAGTCCTCAGGGCCCCCTGG +
Preference number: 5 (lower is better)
Translates to: AWAYRSSCHGLTECF*AQCPSWHKVLRAPW
Trigger: CCAGGGGGCCCTGAGGACTTTGTGCCAAGAGGGGCATTGCGCCCAGAAGCACTCGGTGAGGCCATGGCAAGACGACCTGTAAGCCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491235.1
CDS-3UTR CAA 90 bp TCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTAGGGTGGCCGTGGGGTaGGCGATGTTCTTATTGGCG +
Preference number: 5 (lower is better)
Translates to: STARPLMTRMWRMTSWMARVAVG*AMFLLA
Trigger: CGCCAATAAGAACATCGCCAACCCCACGGCCACCCT...AGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCCGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTCCACGGCCCGGCCGTaGATGACGCGGATGTGGCGG +
Preference number: 5 (lower is better)
Translates to: GEGALFWDLRTRLAGVLESTARP*MTRMWR
Trigger: CCGCCACATCCGCGTCATCAACGGCCGGGCCGTGGA...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CAA 90 bp GGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTATCCACGGCCCGGCCGTaGATGACGCGGATGTGGCGG +
Preference number: 5 (lower is better)
Translates to: GWLQMLCPGPRCPECASVSTARP*MTRMWR
Trigger: CCGCCACATCCGCGTCATCAACGGCCGGGCCGTGGA...TACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp CGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTTCCACGGCCCGGCCGTaGATGACGCGGATGTGGCGG +
Preference number: 5 (lower is better)
Translates to: RPLMTRMWRMTSWMASDVSTARP*MTRMWR
Trigger: CCGCCACATCCGCGTCATCAACGGCCGGGCCGTGGA...AACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp AAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGTCCACGGCCCGGCCGTaGATGACGCGGATGTGGCGG +
Preference number: 5 (lower is better)
Translates to: KVLYSGICVPGWLGCWSGSTARP*MTRMWR
Trigger: CCGCCACATCCGCGTCATCAACGGCCGGGCCGTGGA...CCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS GCA 90 bp ATGAGCTCTGGCCCGATGCCATCCCCTGGGATCATGGTCACCGTGTaGCGCCCGCCATACTTAGCGGACGGAGGGGGCAGGTACTTACTG +
Preference number: 5 (lower is better)
Translates to: MSSGPMPSPGIMVTV*RPPYLADGGGRYLL
Trigger: CAGTAAGTACCTGCCCCCTCCGTCCGCTAAGTATGGCGGGCGGCACACGGTGACCATGATCCCAGGGGATGGCATCGGGCCAGAGCTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427365.6
CDS GCA 90 bp CGCAAGGCCTGGGCTTACAGGTCGTCTTGCCATGGCCTCACCGAGTaGTTCTGGGCGCAATGCCCCTCTTGGCACAAAGTCCTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: RKAWAYRSSCHGLTE*FWAQCPSWHKVLRA
Trigger: GGCCCTGAGGACTTTGTGCCAAGAGGGGCATTGCGCCCAGAAGCACTCGGTGAGGCCATGGCAAGACGACCTGTAAGCCCAGGCCTTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491235.1
CDS GCA 90 bp GGATCACAGGCCATGGGACGCAAGGCCTGGGCTTACAGGTCGTCTTaGCATGGCCTCACCGAGTGCTTCTGGGCGCAATGCCCCTCTTGG +
Preference number: 5 (lower is better)
Translates to: GSQAMGRKAWAYRSS*HGLTECFWAQCPSW
Trigger: CCAAGAGGGGCATTGCGCCCAGAAGCACTCGGTGAGGCCATGGCAAGACGACCTGTAAGCCCAGGCCTTGCGTCCCATGGCCTGTGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491235.1
CDS CCA 90 bp GACGGACTTGACATGCAGCATGAGCTCTGGCCCGATGCCATCCCCTaGGATCATGGTCACCGTGTGCCGCCCGCCATACTTAGCGGACGG +
Preference number: 5 (lower is better)
Translates to: DGLDMQHELWPDAIP*DHGHRVPPAILSGR
Trigger: CCGTCCGCTAAGTATGGCGGGCGGCACACGGTGACCATGATCCCAGGGGATGGCATCGGGCCAGAGCTCATGCTGCATGTCAAGTCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444450.5
ENST00000461215.2
ENST00000491235.1
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS-3UTR CAA 90 bp CCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCTCGGCACAGGATGTCTATGTCCTaGTGCCGGGTCACCACGCCT +
Preference number: 5 (lower is better)
Translates to: PGPRCPECASVGHRQARHRMSMS*CRVTTP
Trigger: AGGCGTGGTGACCCGGCACAAGGACATAGACATCCT...GTGCCGAGCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp CCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCTCGGCACCGCAGGGACTTGGCCTaGGTGATGATCTTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: PGPRCPECASVGHRQARHRRDLA*VMIFRL
Trigger: GAGCCTGAAGATCATCACCAAGGCCAAGTCCCTGCG...GTGCCGAGCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp AAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGACGGCCGTCACTTTCTaGCGCCCGCTCTCCTGCGCC +
Preference number: 5 (lower is better)
Translates to: KVLYSGICVPGWLGCWSGTAVTF*RPLSCA
Trigger: GGCGCAGGAGAGCGGGCGCAAGAAAGTGACGGCCGT...CCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CAA 90 bp AGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGAACGGCCGTCACTTTCTaGCGCCCGCTCTCCTGCGCC +
Preference number: 5 (lower is better)
Translates to: RCFILGSAYQAGWGAGVGTAVTF*RPLSCA
Trigger: GGCGCAGGAGAGCGGGCGCAAGAAAGTGACGGCCGT...TCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CAA 90 bp CTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACACGGCCGTCACTTTCTaGCGCCCGCTCTCCTGCGCC +
Preference number: 5 (lower is better)
Translates to: LQMLCPGPRCPECASVGHTAVTF*RPLSCA
Trigger: GGCGCAGGAGAGCGGGCGCAAGAAAGTGACGGCCGT...GTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp GGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAACGGCCGTCACTTTCTaGCGCCCGCTCTCCTGCGCC +
Preference number: 5 (lower is better)
Translates to: GRRCFILGSAYQAGWGAGTAVTF*RPLSCA
Trigger: GGCGCAGGAGAGCGGGCGCAAGAAAGTGACGGCCGT...TCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS GCA 90 bp ATGTTGGCCTTGTGCACGGCCGTCACTTTCTTGCGCCCGCTCTCCTaGGCCAGCTTGAAGGCATACTCGGCAATGCGCAGGGACTTGGCC +
Preference number: 5 (lower is better)
Translates to: MLALCTAVTFLRPLS*ASLKAYSAMRRDLA
Trigger: GGCCAAGTCCCTGCGCATTGCCGAGTATGCCTTCAAGCTGGCGCAGGAGAGCGGGCGCAAGAAAGTGACGGCCGTGCACAAGGCCAACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444338.1
ENST00000444450.5
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS GCA 90 bp ATGAGCTCTGGCCCGATGCCATCCCCTGGGATCATGGTCACCGTGTaGCGCCCGCCATACTTAGCGGACGGAGGTGGCAAACTAACCCTG +
Preference number: 5 (lower is better)
Translates to: MSSGPMPSPGIMVTV*RPPYLADGGGKLTL
Trigger: CAGGGTTAGTTTGCCACCTCCGTCCGCTAAGTATGGCGGGCGGCACACGGTGACCATGATCCCAGGGGATGGCATCGGGCCAGAGCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461215.2
CDS CCA 90 bp ACAGGCCATGGGACGCAAGGCCTGGGCTTACAGGTCGTCTTGCCATaGCCTCACCGAGTGCTTCTGGGCGCAATGCCCCTCTTGGCACAA +
Preference number: 5 (lower is better)
Translates to: TGHGTQGLGLQVVLP*PHRVLLGAMPLLAQ
Trigger: TTGTGCCAAGAGGGGCATTGCGCCCAGAAGCACTCGGTGAGGCCATGGCAAGACGACCTGTAAGCCCAGGCCTTGCGTCCCATGGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491235.1
CDS-3UTR CAA 90 bp GTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCAGGGTGGCCGTGGGGTaGGCGATGTTCTTATTGGCG +
Preference number: 5 (lower is better)
Translates to: VADDVLDGFRCCALAPDVRVAVG*AMFLLA
Trigger: CGCCAATAAGAACATCGCCAACCCCACGGCCACCCT...GACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp GGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGGGATGGCTTCAGATGTaGTGCCCTGGCCCCCGATGT +
Preference number: 5 (lower is better)
Translates to: GIATGGKWHQLRARRWGQGWLQM*CPGPRC
Trigger: ACATCGGGGGCCAGGGCACAACATCTGAAGCCATCC...CTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp CCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCTCGGCACACACCAGGATGGCTTCAGATGTaGTGCCCTGGCCCCCGATGT +
Preference number: 5 (lower is better)
Translates to: PRCPECASVGHRQARHTPGWLQM*CPGPRC
Trigger: ACATCGGGGGCCAGGGCACAACATCTGAAGCCATCC...TGGTGTGTGCCGAGCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS GCA 90 bp TGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTaGATCTGTAGGACACAGGCAGGCTCGGCACACACCAGGCCATTC +
Preference number: 5 (lower is better)
Translates to: WMASDVVPWPPMSGV*ICRTQAGSAHTRPF
Trigger: GAATGGCCTGGTGTGTGCCGAGCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454076.5
CDS GCA 90 bp ATGAGCTCTGGCCCGATGCCATCCCCTGGGATCATGGTCACCGTGTaGCGCCCGCCATACTTAGCGGACGGAGGCTGTGGGTTACTGAAA +
Preference number: 5 (lower is better)
Translates to: MSSGPMPSPGIMVTV*RPPYLADGGCGLLK
Trigger: TTTCAGTAACCCACAGCCTCCGTCCGCTAAGTATGGCGGGCGGCACACGGTGACCATGATCCCAGGGGATGGCATCGGGCCAGAGCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619865.4
CDS CCA 90 bp TACACATGCGTGCCTGAAGACGGACTTGACATGCAGCATGAGCTCTaGCCCGATGCCATCCCCTGGGATCATGGTCACCGTGTGCCGCCC +
Preference number: 5 (lower is better)
Translates to: YTCVPEDGLDMQHEL*PDAIPWDHGHRVPP
Trigger: GGGCGGCACACGGTGACCATGATCCCAGGGGATGGCATCGGGCCAGAGCTCATGCTGCATGTCAAGTCCGTCTTCAGGCACGCATGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444450.5
ENST00000461215.2
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS CCA 90 bp AGGAGCTCCATACCTGAAGACGGACTTGACATGCAGCATGAGCTCTaGCCCGATGCCATCCCCTGGGATCATGGTCACCGTGTGCCGCCC +
Preference number: 5 (lower is better)
Translates to: RSSIPEDGLDMQHEL*PDAIPWDHGHRVPP
Trigger: GGGCGGCACACGGTGACCATGATCCCAGGGGATGGCATCGGGCCAGAGCTCATGCTGCATGTCAAGTCCGTCTTCAGGTATGGAGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491235.1
CDS-3UTR CAA 90 bp GGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGAGCAATGCGCAGGGACTaGGCCTTGGTGATGATCTTC +
Preference number: 5 (lower is better)
Translates to: GPAVDDADVADDVLDGFRAMRRD*ALVMIF
Trigger: GAAGATCATCACCAAGGCCAAGTCCCTGCGCATTGC...TCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp CCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCTCGGCACACACCACTCTCCTGCGCCAGCTaGAAGGCATACTCGGCAATG +
Preference number: 5 (lower is better)
Translates to: PRCPECASVGHRQARHTPLSCAS*KAYSAM
Trigger: CATTGCCGAGTATGCCTTCAAGCTGGCGCAGGAGAG...TGGTGTGTGCCGAGCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp GGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGCTCTCCTGCGCCAGCTaGAAGGCATACTCGGCAATG +
Preference number: 5 (lower is better)
Translates to: GIATGGKWHQLRARRWGQLSCAS*KAYSAM
Trigger: CATTGCCGAGTATGCCTTCAAGCTGGCGCAGGAGAG...CTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp CTCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTGGCGATGTTCTTATaGGCGATACTCTTGCCGGTG +
Preference number: 5 (lower is better)
Translates to: LHGPAVDDADVADDVLDGLAMFL*AILLPV
Trigger: CACCGGCAAGAGTATCGCCAATAAGAACATCGCCAA...GCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCCGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp TGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGGATGGCTTCAGATGTaGTGCCCTGGCCCCCGATGT +
Preference number: 5 (lower is better)
Translates to: WDCHRREVAPAKGQKMGPGWLQM*CPGPRC
Trigger: ACATCGGGGGCCAGGGCACAACATCTGAAGCCATCC...TGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp GTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAGGACACAGGCAGGCTGCCTGAAGACGGACTaGACATGCAGCATGAGCTCT +
Preference number: 5 (lower is better)
Translates to: VVPWPPMSGVCICRTQAGCLKTD*TCSMSS
Trigger: AGAGCTCATGCTGCATGTCAAGTCCGTCTTCAGGCA...GCCTGCCTGTGTCCTACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp TGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCACGCAGGGACTTGGCCTaGGTGATGATCTTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: WDCHRREVAPAKGQKMGPRRDLA*VMIFRL
Trigger: GAGCCTGAAGATCATCACCAAGGCCAAGTCCCTGCG...TGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp TCCACGGCCCGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTTATTGGCGATACTCTaGCCGGTGTTCCTCGTAGCT +
Preference number: 5 (lower is better)
Translates to: STARPLMTRMWRMTSWMALLAIL*PVFLVA
Trigger: AGCTACGAGGAACACCGGCAAGAGTATCGCCAATAA...AGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCGGGCCGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp GGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTAAGGGTGGCCGTGGGGTaGGCGATGTTCTTATTGGCG +
Preference number: 5 (lower is better)
Translates to: GWLQMLCPGPRCPECASVRVAVG*AMFLLA
Trigger: CGCCAATAAGAACATCGCCAACCCCACGGCCACCCT...TACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp AGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGAAGGGTGGCCGTGGGGTaGGCGATGTTCTTATTGGCG +
Preference number: 5 (lower is better)
Translates to: RCFILGSAYQAGWGAGVGRVAVG*AMFLLA
Trigger: CGCCAATAAGAACATCGCCAACCCCACGGCCACCCT...TCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CAA 90 bp GGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGGATGGCTTCAGATGTaGTGCCCTGGCCCCCGATGT +
Preference number: 5 (lower is better)
Translates to: GRRCFILGSAYQAGWGAGGWLQM*CPGPRC
Trigger: ACATCGGGGGCCAGGGCACAACATCTGAAGCCATCC...TCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CAA 90 bp AAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGGGATGGCTTCAGATGTaGTGCCCTGGCCCCCGATGT +
Preference number: 5 (lower is better)
Translates to: KVLYSGICVPGWLGCWSGGWLQM*CPGPRC
Trigger: ACATCGGGGGCCAGGGCACAACATCTGAAGCCATCC...CCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS TCA 90 bp GCCAGACAAGCCCCTTCAGGGCCACGCGGTTCCGGCGGATGGCCATaGTGGCATTGCGAATGTCCTCTTCATCAGCATTGGAACTCACGT +
Preference number: 5 (lower is better)
Translates to: ARQAPSGPRGSGGWP*WHCECPLHQHWNSR
Trigger: ACGTGAGTTCCAATGCTGATGAAGAGGACATTCGCAATGCCATCATGGCCATCCGCCGGAACCGCGTGGCCCTGAAGGGGCTTGTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444338.1
CDS TCA 90 bp TGCAGCTGCTTCTGGACTGCTCGCAGAGAGGTCAGGGGACATACATaGTGTTGGCCTTGTGCACGGCCGTCACTTTCTTGCGCCCGCTCT +
Preference number: 5 (lower is better)
Translates to: CSCFWTARREVRGHT*CWPCARPSLSCARS
Trigger: AGAGCGGGCGCAAGAAAGTGACGGCCGTGCACAAGGCCAACATCATGTATGTCCCCTGACCTCTCTGCGAGCAGTCCAGAAGCAGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495356.5
CDS-3UTR CAA 90 bp ACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCGGTGGCAGGTTATGGTaGGTTTCGATGTTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: TSWMASDVVPWPPMSGVCGGRLW*VSMLPF
Trigger: GAAGGGCAACATCGAAACCAACCATAACCTGCCACC...GCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGGATGTCTATGTCCTaGTGCCGGGTCACCACGCCT +
Preference number: 5 (lower is better)
Translates to: REKVLYSGICVPGWLGCWRMSMS*CRVTTP
Trigger: AGGCGTGGTGACCCGGCACAAGGACATAGACATCCT...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CAA 90 bp CACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTAAGGATGTCTATGTCCTaGTGCCGGGTCACCACGCCT +
Preference number: 5 (lower is better)
Translates to: HRREVAPAKGQKMGPDPVRMSMS*CRVTTP
Trigger: AGGCGTGGTGACCCGGCACAAGGACATAGACATCCT...TACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp AGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTACCATCCAGGATGTCTATGTCCTaGTGCCGGGTCACCACGCCT +
Preference number: 5 (lower is better)
Translates to: REVAPAKGQKMGPDPVPSRMSMS*CRVTTP
Trigger: AGGCGTGGTGACCCGGCACAAGGACATAGACATCCT...GGATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGCGCAGGGACTTGGCCTaGGTGATGATCTTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: REKVLYSGICVPGWLGCWRRDLA*VMIFRL
Trigger: GAGCCTGAAGATCATCACCAAGGCCAAGTCCCTGCG...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CAA 90 bp CGGCCGTTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTCGCAGGGACTTGGCCTaGGTGATGATCTTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: RPLMTRMWRMTSWMASDVRRDLA*VMIFRL
Trigger: GAGCCTGAAGATCATCACCAAGGCCAAGTCCCTGCG...AACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAACGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp AGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGACTCTCCTGCGCCAGCTaGAAGGCATACTCGGCAATG +
Preference number: 5 (lower is better)
Translates to: RCFILGSAYQAGWGAGVGLSCAS*KAYSAM
Trigger: CATTGCCGAGTATGCCTTCAAGCTGGCGCAGGAGAG...TCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CAA 90 bp AAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGCTCTCCTGCGCCAGCTaGAAGGCATACTCGGCAATG +
Preference number: 5 (lower is better)
Translates to: KVLYSGICVPGWLGCWSGLSCAS*KAYSAM
Trigger: CATTGCCGAGTATGCCTTCAAGCTGGCGCAGGAGAG...CCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CAA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTAGGGTGGCCGTGGGGTaGGCGATGTTCTTATTGGCG +
Preference number: 5 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSRVAVG*AMFLLA
Trigger: CGCCAATAAGAACATCGCCAACCCCACGGCCACCCT...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CAA 90 bp GACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGTGCCTGAAGACGGACTaGACATGCAGCATGAGCTCT +
Preference number: 5 (lower is better)
Translates to: DWDCHRREVAPAKGQKMGCLKTD*TCSMSS
Trigger: AGAGCTCATGCTGCATGTCAAGTCCGTCTTCAGGCA...CCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGGCAATGCGCAGGGACTaGGCCTTGGTGATGATCTTC +
Preference number: 5 (lower is better)
Translates to: GEGALFWDLRTRLAGVLEAMRRD*ALVMIF
Trigger: GAAGATCATCACCAAGGCCAAGTCCCTGCGCATTGC...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CAA 90 bp GATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCAATGCGCAGGGACTaGGCCTTGGTGATGATCTTC +
Preference number: 5 (lower is better)
Translates to: DDADVADDVLDGFRCCALAMRRD*ALVMIF
Trigger: GAAGATCATCACCAAGGCCAAGTCCCTGCGCATTGC...CAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp CTAGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTCTCTCCTGCGCCAGCTaGAAGGCATACTCGGCAATG +
Preference number: 5 (lower is better)
Translates to: LGRRCFILGSAYQAGWGALSCAS*KAYSAM
Trigger: CATTGCCGAGTATGCCTTCAAGCTGGCGCAGGAGAG...AGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS TCA 90 bp TGTCCTTGTGCCGGGTCACCACGCCTGGAAGGCTCTTACAGTGGATaGCGTTGGCATAGAGGTCCAGGCTGGTGCGAAGGATGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: CPCAGSPRLEGSYSG*RWHRGPGWCEGCCF
Trigger: GAAACAACATCCTTCGCACCAGCCTGGACCTCTATGCCAACGTCATCCACTGTAAGAGCCTTCCAGGCGTGGTGACCCGGCACAAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444338.1
ENST00000444450.5
ENST00000461215.2
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS CCA 90 bp GTCCAGGCTGGTGCGAAGGATGTTGTTTCGAGATTTGTGCGACGGTaGCAGGTTATGGTTGGTTTCGATGTTGCCCTTCAGGGCCACGCG +
Preference number: 5 (lower is better)
Translates to: VQAGAKDVVSRFVRR*QVMVGFDVALQGHA
Trigger: CGCGTGGCCCTGAAGGGCAACATCGAAACCAACCATAACCTGCCACCGTCGCACAAATCTCGAAACAACATCCTTCGCACCAGCCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444450.5
ENST00000461215.2
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS CCA 90 bp CCGGACAATGAGGATGTCTATGTCCTTGTGCCGGGTCACCACGCCTaGAAGGCTCTTACAGTGGATGACGTTGGCATAGAGGTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: PDNEDVYVLVPGHHA*KALTVDDVGIEVQA
Trigger: AGCCTGGACCTCTATGCCAACGTCATCCACTGTAAGAGCCTTCCAGGCGTGGTGACCCGGCACAAGGACATAGACATCCTCATTGTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444338.1
ENST00000444450.5
ENST00000461215.2
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS CCA 90 bp CGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTaGCCCCCGATGTCCGGAGTGTGCATATTCTCATTGTCCATGGAT +
Preference number: 5 (lower is better)
Translates to: RMWRMTSWMASDVVP*PPMSGVCIFSLSMD
Trigger: ATCCATGGACAATGAGAATATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217901.10
CDS-3UTR CAA 90 bp GGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGATGCCTGAAGACGGACTaGACATGCAGCATGAGCTCT +
Preference number: 5 (lower is better)
Translates to: GRRCFILGSAYQAGWGAGCLKTD*TCSMSS
Trigger: AGAGCTCATGCTGCATGTCAAGTCCGTCTTCAGGCA...TCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CAA 90 bp GGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGGTGGCAGGTTATGGTaGGTTTCGATGTTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: GRRCFILGSAYQAGWGAGGGRLW*VSMLPF
Trigger: GAAGGGCAACATCGAAACCAACCATAACCTGCCACC...TCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CAA 90 bp AGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTACCATCCGGTGGCAGGTTATGGTaGGTTTCGATGTTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: REVAPAKGQKMGPDPVPSGGRLW*VSMLPF
Trigger: GAAGGGCAACATCGAAACCAACCATAACCTGCCACC...GGATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp CTGGAGTGGGAAGGGGAATCCAAGGAGCAAACCAAGAAGGTCCTAGGGCCAGCCGGTGGCAGGTTATGGTaGGTTTCGATGTTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: LEWEGESKEQTKKVLGPAGGRLW*VSMLPF
Trigger: GAAGGGCAACATCGAAACCAACCATAACCTGCCACC...GGCTGGCCCTAGGACCTTCTTGGTTTGCTCCTTGGATTCCCCTTCCCACTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp GATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATCTGGTGCGAAGGATGTaGTTTCGAGATTTGTGCGAC +
Preference number: 5 (lower is better)
Translates to: DVADDVLDGFRCCALAPDLVRRM*FRDLCD
Trigger: GTCGCACAAATCTCGAAACAACATCCTTCGCACCAG...ATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp TCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCCTGGTGCGAAGGATGTaGTTTCGAGATTTGTGCGAC +
Preference number: 5 (lower is better)
Translates to: SWMASDVVPWPPMSGVCILVRRM*FRDLCD
Trigger: GTCGCACAAATCTCGAAACAACATCCTTCGCACCAG...GATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp TTGATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCGCAATGCGCAGGGACTaGGCCTTGGTGATGATCTTC +
Preference number: 5 (lower is better)
Translates to: LMTRMWRMTSWMASDVVPAMRRD*ALVMIF
Trigger: GAAGATCATCACCAAGGCCAAGTCCCTGCGCATTGC...GGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp GATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATTTATTGGCGATACTCTaGCCGGTGTTCCTCGTAGCT +
Preference number: 5 (lower is better)
Translates to: DVADDVLDGFRCCALAPDLLAIL*PVFLVA
Trigger: AGCTACGAGGAACACCGGCAAGAGTATCGCCAATAA...ATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp TGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCATTGGCGATGTTCTTATaGGCGATACTCTTGCCGGTG +
Preference number: 5 (lower is better)
Translates to: WDCHRREVAPAKGQKMGPLAMFL*AILLPV
Trigger: CACCGGCAAGAGTATCGCCAATAAGAACATCGCCAA...TGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGACCAGGCCATTCTCATaGTCCATGGATGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: GEGALFWDLRTRLAGVLETRPFS*SMDART
Trigger: TGTCCTGGCATCCATGGACAATGAGAATGGCCTGGT...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454076.5
CDS TCA 90 bp TTTCGATGTTGCCCTTCAGGGCCACGCGGTTCCGGCGGATGGCCATaGTGGCATTGCGAATGTCCTCTTCATCAGCATTGGAACTCACGT +
Preference number: 5 (lower is better)
Translates to: FRCCPSGPRGSGGWP*WHCECPLHQHWNSR
Trigger: ACGTGAGTTCCAATGCTGATGAAGAGGACATTCGCAATGCCATCATGGCCATCCGCCGGAACCGCGTGGCCCTGAAGGGCAACATCGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444450.5
ENST00000461215.2
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS-3UTR CAA 90 bp GGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGATCCTCTTCATCAGCATaGGAACTCACGTGCACCTCT +
Preference number: 5 (lower is better)
Translates to: GRRCFILGSAYQAGWGAGSSSSA*ELTCTS
Trigger: AGAGGTGCACGTGAGTTCCAATGCTGATGAAGAGGA...TCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CAA 90 bp AGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAGATCCAGTACCATCCCTGGTGCGAAGGATGTaGTTTCGAGATTTGTGCGAC +
Preference number: 5 (lower is better)
Translates to: REVAPAKGQKMGPDPVPSLVRRM*FRDLCD
Trigger: GTCGCACAAATCTCGAAACAACATCCTTCGCACCAG...GGATGGTACTGGATCTGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp GGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTTATTGGCGATACTCTaGCCGGTGTTCCTCGTAGCT +
Preference number: 5 (lower is better)
Translates to: GEGALFWDLRTRLAGVLELLAIL*PVFLVA
Trigger: AGCTACGAGGAACACCGGCAAGAGTATCGCCAATAA...CTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CAA 90 bp AAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGTTATTGGCGATACTCTaGCCGGTGTTCCTCGTAGCT +
Preference number: 5 (lower is better)
Translates to: KVLYSGICVPGWLGCWSGLLAIL*PVFLVA
Trigger: AGCTACGAGGAACACCGGCAAGAGTATCGCCAATAA...CCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CAA 90 bp GGATGGCTTCAGATGTTGTGCCCTGGCCCCCGATGTCCGGAGTGTGCATCTGTATTGGCGATGTTCTTATaGGCGATACTCTTGCCGGTG +
Preference number: 5 (lower is better)
Translates to: GWLQMLCPGPRCPECASVLAMFL*AILLPV
Trigger: CACCGGCAAGAGTATCGCCAATAAGAACATCGCCAA...TACAGATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGTTGGCGATGTTCTTATaGGCGATACTCTTGCCGGTG +
Preference number: 5 (lower is better)
Translates to: REKVLYSGICVPGWLGCWLAMFL*AILLPV
Trigger: CACCGGCAAGAGTATCGCCAATAAGAACATCGCCAA...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CAA 90 bp GACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGAACCTCACATTCTCATaGTCCATGGATGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: DWDCHRREVAPAKGQKMGNLTFS*SMDART
Trigger: TGTCCTGGCATCCATGGACAATGAGAATGTGAGGTT...CCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp TGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGGGCCAGAAGATGGGGCCAAACCTCACATTCTCATaGTCCATGGATGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: WDCHRREVAPAKGQKMGPNLTFS*SMDART
Trigger: TGTCCTGGCATCCATGGACAATGAGAATGTGAGGTT...TGGCCCCATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp GGAGTGGGAAGGGGAATCCAAGGAGCAAACCAAGAAGGTCCTAGGGCCAGCCTATCCTCTTCATCAGCATaGGAACTCACGTGCACCTCT +
Preference number: 5 (lower is better)
Translates to: GVGRGIQGANQEGPRASLSSSSA*ELTCTS
Trigger: AGAGGTGCACGTGAGTTCCAATGCTGATGAAGAGGA...TAGGCTGGCCCTAGGACCTTCTTGGTTTGCTCCTTGGATTCCCCTTCCCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp GATGACGCGGATGTGGCGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTGATGTTGTTTCGAGATTaGTGCGACGGTGGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: DDADVADDVLDGFRCCALMLFRD*CDGGRL
Trigger: TAACCTGCCACCGTCGCACAAATCTCGAAACAACAT...CAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCGCCACATCCGCGTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp AGGGAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGATGTTGTTTCGAGATTaGTGCGACGGTGGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: REKVLYSGICVPGWLGCWMLFRD*CDGGRL
Trigger: TAACCTGCCACCGTCGCACAAATCTCGAAACAACAT...CCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CAA 90 bp TCCTGTGACGTGCAGGACTGGGATTGCCACAGGAGGGAAGTGGCACCAGCTAAGATGTTGTTTCGAGATTaGTGCGACGGTGGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: SCDVQDWDCHRREVAPAKMLFRD*CDGGRL
Trigger: TAACCTGCCACCGTCGCACAAATCTCGAAACAACAT...CTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGTCCTGCACGTCACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTCTGGTGCGAAGGATGTaGTTTCGAGATTTGTGCGAC +
Preference number: 5 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSLVRRM*FRDLCD
Trigger: GTCGCACAAATCTCGAAACAACATCCTTCGCACCAG...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CAA 90 bp GGAGTGGGAAGGGGAATCCAAGGAGCAAACCAAGAAGGTCCTAGGGCCAGCCTATTATTGGCGATACTCTaGCCGGTGTTCCTCGTAGCT +
Preference number: 5 (lower is better)
Translates to: GVGRGIQGANQEGPRASLLLAIL*PVFLVA
Trigger: AGCTACGAGGAACACCGGCAAGAGTATCGCCAATAA...TAGGCTGGCCCTAGGACCTTCTTGGTTTGCTCCTTGGATTCCCCTTCCCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
CDS-3UTR CAA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTTTGGCGATGTTCTTATaGGCGATACTCTTGCCGGTG +
Preference number: 5 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSLAMFL*AILLPV
Trigger: CACCGGCAAGAGTATCGCCAATAAGAACATCGCCAA...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000454076.5
CDS-3UTR CAA 90 bp AGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGGGAAACCTCACATTCTCATaGTCCATGGATGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: RCFILGSAYQAGWGAGVGNLTFS*SMDART
Trigger: TGTCCTGGCATCCATGGACAATGAGAATGTGAGGTT...TCCCACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370092.7
ENST00000370093.5
CDS CCA 90 bp GTCCAGGCTGGTGCGAAGGATGTTGTTTCGAGATTTGTGCGACGGTaGCAGGTTATGGTTGGTTTCGATGTTGCTCGAATCCCAGCATCG +
Preference number: 5 (lower is better)
Translates to: VQAGAKDVVSRFVRR*QVMVGFDVARIPAS
Trigger: CGATGCTGGGATTCGAGCAACATCGAAACCAACCATAACCTGCCACCGTCGCACAAATCTCGAAACAACATCCTTCGCACCAGCCTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444338.1
CDS-3UTR CAA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTATGTTGTTTCGAGATTaGTGCGACGGTGGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSMLFRD*CDGGRL
Trigger: TAACCTGCCACCGTCGCACAAATCTCGAAACAACAT...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
CDS-3UTR CAA 90 bp GAGAAGGTGCTTTATTCTGGGATCTGCGTACCAGGCTGGCTGGGGTGCTGGAGTGTGTGCATATTCTCATaGTCCATGGATGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: EKVLYSGICVPGWLGCWSVCIFS*SMDART
Trigger: TGTCCTGGCATCCATGGACAATGAGAATATGCACAC...ACTCCAGCACCCCAGCCAGCCTGGTACGCAGATCCCAGAATAAAGCACCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217901.10
CDS TCA 90 bp AACCCTGGTACAGCAGGGAAATCATTACAACAAACCACAGATCCATaGCAACAGTCACGTTATCACTTCGCCGATCACTTTTTCTTATTA +
Preference number: 5 (lower is better)
Translates to: NPGTAGKSLQQTTDP*QQSRYHFADHFFLL
Trigger: TAATAAGAAAAAGTGATCGGCGAAGTGATAACGTGACTGTTGTCATGGATCTGTGGTTTGTTGTAATGATTTCCCTGCTGTACCAGGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461215.2
CDS CCA 72 bp CAGCATGGCCCACTCCCAGGGACGGCAGAGAAGGGCTaGCCCGAGCACCGCCTTCGCGGCGCTGCCGGCGAC +
Preference number: 6 (lower is better)
Translates to: QHGPLPGTAEKG*PEHRLRGAAGD
Trigger: GTCGCCGGCAGCGCCGCGAAGGCGGTGCTCGGGCCAGCCCTTCTCTGCCGTCCCTGGGAGTGGGCCATGCTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497043.5
CDS GCA 72 bp GGTGCGAAGTTTCGGGGACAGGCGCGGACCCGGTACTaGGCACGCGCGCGGTCGCACCGATTCACGCCCCCT +
Preference number: 6 (lower is better)
Translates to: GAKFRGQARTRY*ARARSHRFTPP
Trigger: AGGGGGCGTGAATCGGTGCGACCGCGCGCGTGCGCAGTACCGGGTCCGCGCCTGTCCCCGAAACTTCGCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370092.7
ENST00000619865.4
CDS CCA 72 bp TCATGGCCTCATCTCCCAGGGACGGCAGAGAAGGGCTaGCCCGAGCACCGCCTTCGCGGCGCTGCCGGCGAC +
Preference number: 6 (lower is better)
Translates to: SWPHLPGTAEKG*PEHRLRGAAGD
Trigger: GTCGCCGGCAGCGCCGCGAAGGCGGTGCTCGGGCCAGCCCTTCTCTGCCGTCCCTGGGAGATGAGGCCATGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461215.2
CDS TCA 72 bp CGGCGCTGCCGGCGACGGTCGCTACCTTCAGCGCCATaGCGGAAAGTGAGAGCCTCCGCACGTCCCGACACG +
Preference number: 6 (lower is better)
Translates to: RRCRRRSLPSAP*RKVRASARPDT
Trigger: CGTGTCGGGACGTGCGGAGGCTCTCACTTTCCGTCATGGCGCTGAAGGTAGCGACCGTCGCCGGCAGCGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000619865.4
CDS GCA 72 bp GGCCCGATGCCATCCCCTGGGATCATGGTCACCGTGTaGCGCCCGCCATACTTAGCGGACGGAGGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: GPMPSPGIMVTV*RPPYLADGGGR
Trigger: CCTGCCCCCTCCGTCCGCTAAGTATGGCGGGCGGCACACGGTGACCATGATCCCAGGGGATGGCATCGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427365.6
CDS CCA 72 bp AGGACTGGTGCCACCTTCCCCGAGCCCAGGCCAGTCTaGCGGGATCACAGGCCATGGGACGCAAGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: RTGATFPEPRPV*RDHRPWDARPG
Trigger: CCCAGGCCTTGCGTCCCATGGCCTGTGATCCCGCCAGACTGGCCTGGGCTCGGGGAAGGTGGCACCAGTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491235.1
CDS TCA 72 bp GGCCAGGGGCTTGCGGGGCACTGGGAGCCACTCACTTaGGGTGGTCCAGCATCATGCAGCTGGCCAGCAGGG +
Preference number: 6 (lower is better)
Translates to: GQGLAGHWEPLT*GGPASCSWPAG
Trigger: CCCTGCTGGCCAGCTGCATGATGCTGGACCACCTCAAGTGAGTGGCTCCCAGTGCCCCGCAAGCCCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370093.5
CDS GCA 72 bp GGCCCGATGCCATCCCCTGGGATCATGGTCACCGTGTaGCGCCCGCCATACTTAGCGGACGGAGGCTGTGGG +
Preference number: 6 (lower is better)
Translates to: GPMPSPGIMVTV*RPPYLADGGCG
Trigger: CCCACAGCCTCCGTCCGCTAAGTATGGCGGGCGGCACACGGTGACCATGATCCCAGGGGATGGCATCGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619865.4
CDS CAA 72 bp TGGCCAGGGGCTTGCGGGGCACTGGGAGCCACTCACTaGAGGTGGTCCAGCATCATGCAGCTGGCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: WPGACGALGATH*RWSSIMQLASR
Trigger: CCTGCTGGCCAGCTGCATGATGCTGGACCACCTCAAGTGAGTGGCTCCCAGTGCCCCGCAAGCCCCTGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370093.5
CDS TCA 72 bp GGCGACGGTCGCTACCTTCAGCGCCATGACGGAAAGTaGGAGCCTCCGCACGTCCCGACACGCAGATACCGC +
Preference number: 6 (lower is better)
Translates to: GDGRYLQRHDGK*EPPHVPTRRYR
Trigger: GCGGTATCTGCGTGTCGGGACGTGCGGAGGCTCTCACTTTCCGTCATGGCGCTGAAGGTAGCGACCGTCGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000619865.4
CDS GCA 72 bp ACACGCAGATACCGCTCTCGCGAGAGTTCGACGGGGTaGGAAGTTTCGGGGACAGGCGCGGACCCGGTACTG +
Preference number: 6 (lower is better)
Translates to: TRRYRSRESSTG*EVSGTGADPVL
Trigger: CAGTACCGGGTCCGCGCCTGTCCCCGAAACTTCGCACCCCGTCGAACTCTCGCGAGAGCGGTATCTGCGTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370092.7
ENST00000619865.4
CDS GCA 72 bp GGCCCGATGCCATCCCCTGGGATCATGGTCACCGTGTaGCGCCCGCCATACTTAGCGGACGGAGGTGGCAAA +
Preference number: 6 (lower is better)
Translates to: GPMPSPGIMVTV*RPPYLADGGGK
Trigger: TTTGCCACCTCCGTCCGCTAAGTATGGCGGGCGGCACACGGTGACCATGATCCCAGGGGATGGCATCGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461215.2
CDS CCA 72 bp GGGACGCAAGGCCTGGGCTTACAGGTCGTCTTGCCATaGCCTCACCGAGTGCTTCTGGGCGCAATGCCCCTC +
Preference number: 6 (lower is better)
Translates to: GTQGLGLQVVLP*PHRVLLGAMPL
Trigger: GAGGGGCATTGCGCCCAGAAGCACTCGGTGAGGCCATGGCAAGACGACCTGTAAGCCCAGGCCTTGCGTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491235.1
CDS GCA 72 bp GCCATGGGACGCAAGGCCTGGGCTTACAGGTCGTCTTaGCATGGCCTCACCGAGTGCTTCTGGGCGCAATGC +
Preference number: 6 (lower is better)
Translates to: AMGRKAWAYRSS*HGLTECFWAQC
Trigger: GCATTGCGCCCAGAAGCACTCGGTGAGGCCATGGCAAGACGACCTGTAAGCCCAGGCCTTGCGTCCCATGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491235.1
CDS CCA 72 bp AGTCTGGCGGGATCACAGGCCATGGGACGCAAGGCCTaGGCTTACAGGTCGTCTTGCCATGGCCTCACCGAG +
Preference number: 6 (lower is better)
Translates to: SLAGSQAMGRKA*AYRSSCHGLTE
Trigger: CTCGGTGAGGCCATGGCAAGACGACCTGTAAGCCCAGGCCTTGCGTCCCATGGCCTGTGATCCCGCCAGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491235.1
CDS CAA 72 bp GCCGTCACTTTCTTGCGCCCGCTCTCCTGCGCCAGCTaGAAGGCATACTCGGCAATGCGCAGGGACTTGGCC +
Preference number: 6 (lower is better)
Translates to: AVTFLRPLSCAS*KAYSAMRRDLA
Trigger: GGCCAAGTCCCTGCGCATTGCCGAGTATGCCTTCAAGCTGGCGCAGGAGAGCGGGCGCAAGAAAGTGACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444338.1
ENST00000444450.5
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS CAA 72 bp GGCCATGGGACGCAAGGCCTGGGCTTACAGGTCGTCTaGCCATGGCCTCACCGAGTGCTTCTGGGCGCAATG +
Preference number: 6 (lower is better)
Translates to: GHGTQGLGLQVV*PWPHRVLLGAM
Trigger: CATTGCGCCCAGAAGCACTCGGTGAGGCCATGGCAAGACGACCTGTAAGCCCAGGCCTTGCGTCCCATGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491235.1
CDS CAA 90 bp GGGATCACAGGCCATGGGACGCAAGGCCTGGGCTTACAGGTCGTCTaGCCATGGCCTCACCGAGTGCTTCTGGGCGCAATGCCCCTCTTG +
Preference number: 6 (lower is better)
Translates to: GITGHGTQGLGLQVV*PWPHRVLLGAMPLL
Trigger: CAAGAGGGGCATTGCGCCCAGAAGCACTCGGTGAGGCCATGGCAAGACGACCTGTAAGCCCAGGCCTTGCGTCCCATGGCCTGTGATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491235.1
CDS TCA 72 bp CCGTCACTTTCTTGCGCCCGCTCTCCTGCGCCAGCTTaGAGGCATACTCGGCAATGCGCAGGGACTTGGCCT +
Preference number: 6 (lower is better)
Translates to: PSLSCARSPAPA*RHTRQCAGTWP
Trigger: AGGCCAAGTCCCTGCGCATTGCCGAGTATGCCTTCAAGCTGGCGCAGGAGAGCGGGCGCAAGAAAGTGACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444338.1
ENST00000444450.5
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS GCA 72 bp TTGTGCACGGCCGTCACTTTCTTGCGCCCGCTCTCCTaGGCCAGCTTGAAGGCATACTCGGCAATGCGCAGG +
Preference number: 6 (lower is better)
Translates to: LCTAVTFLRPLS*ASLKAYSAMRR
Trigger: CCTGCGCATTGCCGAGTATGCCTTCAAGCTGGCGCAGGAGAGCGGGCGCAAGAAAGTGACGGCCGTGCACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444338.1
ENST00000444450.5
ENST00000454076.5
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS CCA 72 bp GACATGCAGCATGAGCTCTGGCCCGATGCCATCCCCTaGGATCATGGTCACCGTGTGCCGCCCGCCATACTT +
Preference number: 6 (lower is better)
Translates to: DMQHELWPDAIP*DHGHRVPPAIL
Trigger: AAGTATGGCGGGCGGCACACGGTGACCATGATCCCAGGGGATGGCATCGGGCCAGAGCTCATGCTGCATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444450.5
ENST00000461215.2
ENST00000491235.1
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS CAA 72 bp GGCGGGGACCCAGGAGCTCCATACCTGAAGACGGACTaGACATGCAGCATGAGCTCTGGCCCGATGCCATCC +
Preference number: 6 (lower is better)
Translates to: GGDPGAPYLKTD*TCSMSSGPMPS
Trigger: GGATGGCATCGGGCCAGAGCTCATGCTGCATGTCAAGTCCGTCTTCAGGTATGGAGCTCCTGGGTCCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491235.1
CDS TCA 72 bp GCCGGGTCACCACGCCTGGAAGGCTCTTACAGTGGATaGCGTTGGCATAGAGGTCCAGGCTGGTGCGAAGGA +
Preference number: 6 (lower is better)
Translates to: AGSPRLEGSYSG*RWHRGPGWCEG
Trigger: TCCTTCGCACCAGCCTGGACCTCTATGCCAACGTCATCCACTGTAAGAGCCTTCCAGGCGTGGTGACCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444338.1
ENST00000444450.5
ENST00000461215.2
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS TCA 72 bp GCCCCTTCAGGGCCACGCGGTTCCGGCGGATGGCCATaGTGGCATTGCGAATGTCCTCTTCATCAGCATTGG +
Preference number: 6 (lower is better)
Translates to: APSGPRGSGGWP*WHCECPLHQHW
Trigger: CCAATGCTGATGAAGAGGACATTCGCAATGCCATCATGGCCATCCGCCGGAACCGCGTGGCCCTGAAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444338.1
CDS CAA 90 bp CTGCTTCTGGACTGCTCGCAGAGAGGTCAGGGGACATACATGATGTaGGCCTTGTGCACGGCCGTCACTTTCTTGCGCCCGCTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: LLLDCSQRGQGTYMM*ALCTAVTFLRPLSC
Trigger: GCAGGAGAGCGGGCGCAAGAAAGTGACGGCCGTGCACAAGGCCAACATCATGTATGTCCCCTGACCTCTCTGCGAGCAGTCCAGAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495356.5
CDS TCA 72 bp TGCCCTTCAGGGCCACGCGGTTCCGGCGGATGGCCATaGTGGCATTGCGAATGTCCTCTTCATCAGCATTGG +
Preference number: 6 (lower is better)
Translates to: CPSGPRGSGGWP*WHCECPLHQHW
Trigger: CCAATGCTGATGAAGAGGACATTCGCAATGCCATCATGGCCATCCGCCGGAACCGCGTGGCCCTGAAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444450.5
ENST00000461215.2
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS TCA 72 bp GGGAGGCCTCGGTCCAAATCCACCATCCACTCTTCTTaGGATGGCTTCATGGCCTCATCTCCCAGGGACGGC +
Preference number: 6 (lower is better)
Translates to: GRPRSKSTIHSS*DGFMASSPRDG
Trigger: GCCGTCCCTGGGAGATGAGGCCATGAAGCCATCTCAAGAAGAGTGGATGGTGGATTTGGACCGAGGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461215.2
CDS GCA 72 bp TGGGCTTACAGGTCGTCTTGCCATGGCCTCACCGAGTaGTTCTGGGCGCAATGCCCCTCTTGGCACAAAGTC +
Preference number: 6 (lower is better)
Translates to: WAYRSSCHGLTE*FWAQCPSWHKV
Trigger: GACTTTGTGCCAAGAGGGGCATTGCGCCCAGAAGCACTCGGTGAGGCCATGGCAAGACGACCTGTAAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491235.1
CDS GCA 72 bp GCAGGCCCAAGCAGGCCACTGCAGCTGCTTCTGGACTaGTCGCAGAGAGGTCAGGGGACATACATGATGTTG +
Preference number: 6 (lower is better)
Translates to: AGPSRPLQLLLD*SQRGQGTYMML
Trigger: CAACATCATGTATGTCCCCTGACCTCTCTGCGAGCAGTCCAGAAGCAGCTGCAGTGGCCTGCTTGGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495356.5
CDS CCA 72 bp GTGCCTGAAGACGGACTTGACATGCAGCATGAGCTCTaGCCCGATGCCATCCCCTGGGATCATGGTCACCGT +
Preference number: 6 (lower is better)
Translates to: VPEDGLDMQHEL*PDAIPWDHGHR
Trigger: ACGGTGACCATGATCCCAGGGGATGGCATCGGGCCAGAGCTCATGCTGCATGTCAAGTCCGTCTTCAGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444450.5
ENST00000461215.2
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS CCA 72 bp TACAGGTCGTCTTGCCATGGCCTCACCGAGTGCTTCTaGGCGCAATGCCCCTCTTGGCACAAAGTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: YRSSCHGLTECF*AQCPSWHKVLR
Trigger: CCTGAGGACTTTGTGCCAAGAGGGGCATTGCGCCCAGAAGCACTCGGTGAGGCCATGGCAAGACGACCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491235.1
CDS CCA 72 bp TGGGTTACTGAAAAGATGTTCCTCGAGGGGACCTCGTaGGCGCCTAGAACCTCCCAGGGACGGCAGAGAAGG +
Preference number: 6 (lower is better)
Translates to: WVTEKMFLEGTS*APRTSQGRQRR
Trigger: CCTTCTCTGCCGTCCCTGGGAGGTTCTAGGCGCCCACGAGGTCCCCTCGAGGAACATCTTTTCAGTAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619865.4
CDS CCA 72 bp GTTTGTTCTGAAAAGATGTTCCTCGAGGGGACCTCGTaGGCGCCTAGAACCTCCCAGGGACGGCAGAGAAGG +
Preference number: 6 (lower is better)
Translates to: VCSEKMFLEGTS*APRTSQGRQRR
Trigger: CCTTCTCTGCCGTCCCTGGGAGGTTCTAGGCGCCCACGAGGTCCCCTCGAGGAACATCTTTTCAGAACAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000491235.1
ENST00000495356.5
CDS CCA 72 bp GTACTTACTGAAAAGATGTTCCTCGAGGGGACCTCGTaGGCGCCTAGAACCTCCCAGGGACGGCAGAGAAGG +
Preference number: 6 (lower is better)
Translates to: VLTEKMFLEGTS*APRTSQGRQRR
Trigger: CCTTCTCTGCCGTCCCTGGGAGGTTCTAGGCGCCCACGAGGTCCCCTCGAGGAACATCTTTTCAGTAAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427365.6
CDS CCA 72 bp ATGTTCCTCGAGGGGACCTCGTGGGCGCCTAGAACCTaGCAGAGACCAAATGCCAGCGGTTGGTTTGATGTC +
Preference number: 6 (lower is better)
Translates to: MFLEGTSWAPRT*QRPNASGWFDV
Trigger: GACATCAAACCAACCGCTGGCATTTGGTCTCTGCCAGGTTCTAGGCGCCCACGAGGTCCCCTCGAGGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497043.5
CDS CAA 72 bp TTGAAGGCATACTCGGCAATGCGCAGGGACTTGGCCTaGGTGATGATCTTCAGGCTCTCCACCACTCCCGCC +
Preference number: 6 (lower is better)
Translates to: LKAYSAMRRDLA*VMIFRLSTTPA
Trigger: GGCGGGAGTGGTGGAGAGCCTGAAGATCATCACCAAGGCCAAGTCCCTGCGCATTGCCGAGTATGCCTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444338.1
ENST00000444450.5
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS CAA 72 bp GCCAGCAGGGTGGCCGTGGGGTTGGCGATGTTCTTATaGGCGATACTCTTGCCGGTGTTCCTCGTAGCTGTT +
Preference number: 6 (lower is better)
Translates to: ASRVAVGLAMFL*AILLPVFLVAV
Trigger: AACAGCTACGAGGAACACCGGCAAGAGTATCGCCAATAAGAACATCGCCAACCCCACGGCCACCCTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000454076.5
ENST00000619865.4
CDS CAA 72 bp AGGGAGGCCTCGGTCCAAATCCACCATCCACTCTTCTaGAGATGGCTTCATGGCCTCATCTCCCAGGGACGG +
Preference number: 6 (lower is better)
Translates to: REASVQIHHPLF*RWLHGLISQGR
Trigger: CCGTCCCTGGGAGATGAGGCCATGAAGCCATCTCAAGAAGAGTGGATGGTGGATTTGGACCGAGGCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461215.2
CDS TCA 72 bp CCCGCCATACTTAGCGGACGGAGGAATTGTTTGTTCTaGAAAGATGTTCCTCGAGGGGACCTCGTGGGCGCC +
Preference number: 6 (lower is better)
Translates to: PAILSGRRNCLF*KDVPRGDLVGA
Trigger: GGCGCCCACGAGGTCCCCTCGAGGAACATCTTTTCAGAACAAACAATTCCTCCGTCCGCTAAGTATGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000444450.5
ENST00000491235.1
ENST00000495356.5
ENST00000497043.5
CDS GCA 72 bp GTGTTCTCCCGGACAATGAGGATGTCTATGTCCTTGTaGCGGGTCACCACGCCTGGAAGGCTCTTACAGTGG +
Preference number: 6 (lower is better)
Translates to: VFSRTMRMSMSL*RVTTPGRLLQW
Trigger: CCACTGTAAGAGCCTTCCAGGCGTGGTGACCCGGCACAAGGACATAGACATCCTCATTGTCCGGGAGAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444338.1
ENST00000444450.5
ENST00000461215.2
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS GCA 72 bp CTCGGCACACACCAGGCCATTCTCATTGTCCATGGATaGCAGGACAGCCTTACGGATGGAGGTGGCATAGGA +
Preference number: 6 (lower is better)
Translates to: LGTHQAILIVHG*QDSLTDGGGIG
Trigger: TCCTATGCCACCTCCATCCGTAAGGCTGTCCTGGCATCCATGGACAATGAGAATGGCCTGGTGTGTGCCGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454076.5
CDS CCA 72 bp CGGATGACGTCCTGGATGGCTTCAGATGTTGTGCCCTaGCCCCCGATGTCCGGAGTGTGCATATTCTCATTG +
Preference number: 6 (lower is better)
Translates to: RMTSWMASDVVP*PPMSGVCIFSL
Trigger: CAATGAGAATATGCACACTCCGGACATCGGGGGCCAGGGCACAACATCTGAAGCCATCCAGGACGTCATCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217901.10
CDS CCA 72 bp ATACCTGAAGACGGACTTGACATGCAGCATGAGCTCTaGCCCGATGCCATCCCCTGGGATCATGGTCACCGT +
Preference number: 6 (lower is better)
Translates to: IPEDGLDMQHEL*PDAIPWDHGHR
Trigger: ACGGTGACCATGATCCCAGGGGATGGCATCGGGCCAGAGCTCATGCTGCATGTCAAGTCCGTCTTCAGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491235.1
CDS CAA 72 bp GCCAGCTTGAAGGCATACTCGGCAATGCGCAGGGACTaGGCCTTGGTGATGATCTTCAGGCTCTCCACCACT +
Preference number: 6 (lower is better)
Translates to: ASLKAYSAMRRD*ALVMIFRLSTT
Trigger: AGTGGTGGAGAGCCTGAAGATCATCACCAAGGCCAAGTCCCTGCGCATTGCCGAGTATGCCTTCAAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444338.1
ENST00000444450.5
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS TCA 72 bp TTCTGGACTGCTCGCAGAGAGGTCAGGGGACATACATaGTGTTGGCCTTGTGCACGGCCGTCACTTTCTTGC +
Preference number: 6 (lower is better)
Translates to: FWTARREVRGHT*CWPCARPSLSC
Trigger: GCAAGAAAGTGACGGCCGTGCACAAGGCCAACATCATGTATGTCCCCTGACCTCTCTGCGAGCAGTCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495356.5
CDS CCA 72 bp TGTTTCGAGATTTGTGCGACGGTGGCAGGTTATGGTTaGTTTCGATGTTGCCCTTCAGGGCCACGCGGTTCC +
Preference number: 6 (lower is better)
Translates to: CFEICATVAGYG*FRCCPSGPRGS
Trigger: GGAACCGCGTGGCCCTGAAGGGCAACATCGAAACCAACCATAACCTGCCACCGTCGCACAAATCTCGAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444450.5
ENST00000461215.2
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS CCA 72 bp GAGGATGTCTATGTCCTTGTGCCGGGTCACCACGCCTaGAAGGCTCTTACAGTGGATGACGTTGGCATAGAG +
Preference number: 6 (lower is better)
Translates to: EDVYVLVPGHHA*KALTVDDVGIE
Trigger: CTCTATGCCAACGTCATCCACTGTAAGAGCCTTCCAGGCGTGGTGACCCGGCACAAGGACATAGACATCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444338.1
ENST00000444450.5
ENST00000461215.2
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS CCA 72 bp GTTTGTTCTGAAAAGATGTTCCTCGAGGGGACCTCGTaGGCGCCTAGAACCTGGCAGAGACCAAATGCCAGC +
Preference number: 6 (lower is better)
Translates to: VCSEKMFLEGTS*APRTWQRPNAS
Trigger: GCTGGCATTTGGTCTCTGCCAGGTTCTAGGCGCCCACGAGGTCCCCTCGAGGAACATCTTTTCAGAACAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497043.5
CDS CAA 72 bp GCCGTGGGGTTGGCGATGTTCTTATTGGCGATACTCTaGCCGGTGTTCCTCGTAGCTGTTTCAAACACCGCG +
Preference number: 6 (lower is better)
Translates to: AVGLAMFLLAIL*PVFLVAVSNTA
Trigger: CGCGGTGTTTGAAACAGCTACGAGGAACACCGGCAAGAGTATCGCCAATAAGAACATCGCCAACCCCACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000454076.5
ENST00000619865.4
CDS CAA 90 bp CGTGGGCGCCTAGAACCTGGCAGAGACCAAATGCCAGCGGTTGGTTaGATGTCTAACCCAGAAAGCCAAGTTGGAAGGAAAAACGGACCG +
Preference number: 6 (lower is better)
Translates to: RGRLEPGRDQMPAVG*MSNPESQVGRKNGP
Trigger: CGGTCCGTTTTTCCTTCCAACTTGGCTTTCTGGGTTAGACATCAAACCAACCGCTGGCATTTGGTCTCTGCCAGGTTCTAGGCGCCCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497043.5
CDS CCA 72 bp ATGTTGTTTCGAGATTTGTGCGACGGTGGCAGGTTATaGTTGGTTTCGATGTTGCCCTTCAGGGCCACGCGG +
Preference number: 6 (lower is better)
Translates to: MLFRDLCDGGRL*LVSMLPFRATR
Trigger: CCGCGTGGCCCTGAAGGGCAACATCGAAACCAACCATAACCTGCCACCGTCGCACAAATCTCGAAACAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444450.5
ENST00000461215.2
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS CCA 72 bp GTTTGTTCTGAAAAGATGTTCCTCGAGGGGACCTCGTaGGCGCCTAGAACCTTCAGCGCCATGACGGAAAGT +
Preference number: 6 (lower is better)
Translates to: VCSEKMFLEGTS*APRTFSAMTES
Trigger: ACTTTCCGTCATGGCGCTGAAGGTTCTAGGCGCCCACGAGGTCCCCTCGAGGAACATCTTTTCAGAACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444450.5
CDS CAA 72 bp TTGTTTCGAGATTTGTGCGACGGTGGCAGGTTATGGTaGGTTTCGATGTTGCCCTTCAGGGCCACGCGGTTC +
Preference number: 6 (lower is better)
Translates to: LFRDLCDGGRLW*VSMLPFRATRF
Trigger: GAACCGCGTGGCCCTGAAGGGCAACATCGAAACCAACCATAACCTGCCACCGTCGCACAAATCTCGAAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444450.5
ENST00000461215.2
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS GCA 72 bp GATGTCCGGAGTGTGCATATTCTCATTGTCCATGGATaGCAGGACAGCCTTACGGATGGAGGTGGCATAGGA +
Preference number: 6 (lower is better)
Translates to: DVRSVHILIVHG*QDSLTDGGGIG
Trigger: TCCTATGCCACCTCCATCCGTAAGGCTGTCCTGGCATCCATGGACAATGAGAATATGCACACTCCGGACATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217901.10
CDS CCA 72 bp TGTTTCGAGATTTGTGCGACGGTGGCAGGTTATGGTTaGTTTCGATGTTGCTCGAATCCCAGCATCGCAGCG +
Preference number: 6 (lower is better)
Translates to: CFEICATVAGYG*FRCCSNPSIAA
Trigger: CGCTGCGATGCTGGGATTCGAGCAACATCGAAACCAACCATAACCTGCCACCGTCGCACAAATCTCGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444338.1
CDS CAA 72 bp AGGTCCAGGCTGGTGCGAAGGATGTTGTTTCGAGATTaGTGCGACGGTGGCAGGTTATGGTTGGTTTCGATG +
Preference number: 6 (lower is better)
Translates to: RSRLVRRMLFRD*CDGGRLWLVSM
Trigger: CATCGAAACCAACCATAACCTGCCACCGTCGCACAAATCTCGAAACAACATCCTTCGCACCAGCCTGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444338.1
ENST00000444450.5
ENST00000461215.2
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS GCA 72 bp TCCAGGCTGGTGCGAAGGATGTTGTTTCGAGATTTGTaGGACGGTGGCAGGTTATGGTTGGTTTCGATGTTG +
Preference number: 6 (lower is better)
Translates to: SRLVRRMLFRDL*DGGRLWLVSML
Trigger: CAACATCGAAACCAACCATAACCTGCCACCGTCGCACAAATCTCGAAACAACATCCTTCGCACCAGCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444338.1
ENST00000444450.5
ENST00000461215.2
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS CCA 72 bp AGCATTGGAACTCACGTGCACCTCTTCAAAGTCCACTaGTACACATGCGTGCCTGAAGACGGACTTGACATG +
Preference number: 6 (lower is better)
Translates to: SIGTHVHLFKVH*YTCVPEDGLDM
Trigger: CATGTCAAGTCCGTCTTCAGGCACGCATGTGTACCAGTGGACTTTGAAGAGGTGCACGTGAGTTCCAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444450.5
ENST00000461215.2
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS CCA 72 bp GGTGCGAAGGATGTTGTTTCGAGATTTGTGCGACGGTaGCAGGTTATGGTTGGTTTCGATGTTGCCCTTCAG +
Preference number: 6 (lower is better)
Translates to: GAKDVVSRFVRR*QVMVGFDVALQ
Trigger: CTGAAGGGCAACATCGAAACCAACCATAACCTGCCACCGTCGCACAAATCTCGAAACAACATCCTTCGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444450.5
ENST00000461215.2
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS CAA 72 bp TTGTTTCGAGATTTGTGCGACGGTGGCAGGTTATGGTaGGTTTCGATGTTGCTCGAATCCCAGCATCGCAGC +
Preference number: 6 (lower is better)
Translates to: LFRDLCDGGRLW*VSMLLESQHRS
Trigger: GCTGCGATGCTGGGATTCGAGCAACATCGAAACCAACCATAACCTGCCACCGTCGCACAAATCTCGAAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444338.1
CDS GCA 72 bp TTGCGAATGTCCTCTTCATCAGCATTGGAACTCACGTaGACCTCTTCAAAGTCCACTGGTACACATGCGTGC +
Preference number: 6 (lower is better)
Translates to: LRMSSSSALELT*TSSKSTGTHAC
Trigger: GCACGCATGTGTACCAGTGGACTTTGAAGAGGTGCACGTGAGTTCCAATGCTGATGAAGAGGACATTCGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000217901.10
ENST00000370092.7
ENST00000370093.5
ENST00000427365.6
ENST00000444450.5
ENST00000461215.2
ENST00000495356.5
ENST00000497043.5
ENST00000619865.4
CDS CCA 72 bp ATGTTGTTTCGAGATTTGTGCGACGGTGGCAGGTTATaGTTGGTTTCGATGTTGCTCGAATCCCAGCATCGC +
Preference number: 6 (lower is better)
Translates to: MLFRDLCDGGRL*LVSMLLESQHR
Trigger: GCGATGCTGGGATTCGAGCAACATCGAAACCAACCATAACCTGCCACCGTCGCACAAATCTCGAAACAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444338.1
CDS CCA 72 bp GGTGCGAAGGATGTTGTTTCGAGATTTGTGCGACGGTaGCAGGTTATGGTTGGTTTCGATGTTGCTCGAATC +
Preference number: 6 (lower is better)
Translates to: GAKDVVSRFVRR*QVMVGFDVARI
Trigger: GATTCGAGCAACATCGAAACCAACCATAACCTGCCACCGTCGCACAAATCTCGAAACAACATCCTTCGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444338.1
CDS CAA 72 bp CTAGAACCTGGCAGAGACCAAATGCCAGCGGTTGGTTaGATGTCTAACCCAGAAAGCCAAGTTGGAAGGAAA +
Preference number: 6 (lower is better)
Translates to: LEPGRDQMPAVG*MSNPESQVGRK
Trigger: TTTCCTTCCAACTTGGCTTTCTGGGTTAGACATCAAACCAACCGCTGGCATTTGGTCTCTGCCAGGTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497043.5
CDS TCA 72 bp ACAGCAGGGAAATCATTACAACAAACCACAGATCCATaGCAACAGTCACGTTATCACTTCGCCGATCACTTT +
Preference number: 6 (lower is better)
Translates to: TAGKSLQQTTDP*QQSRYHFADHF
Trigger: AAAGTGATCGGCGAAGTGATAACGTGACTGTTGTCATGGATCTGTGGTTTGTTGTAATGATTTCCCTGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461215.2