Pregenerated sensors for IDH2-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000259685Ensembl transcript IDs: ENST00000561101.3
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TGGAGAGGGTCAGCCTCGCAAGCGGCTCTGCTAATCCCCCAGCCCTaGTCCCGCTCGCGGGTCCCGGTGGGTCTCACGCCTGTAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: WRGSASQAALLIPQP*SRSRVPVGLTPVAP Trigger: AGGAGCTACAGGCGTGAGACCCACCGGGACCCGCGAGCGGGATCAGGGCTGGGGGATTAGCAGAGCCGCTTGCGAGGCTGACCCTCTCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000561101.3 |
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| CDS TCA 90 bp | GGCCCCCAATCCAAGTCACAGCACAAAATGTCACGCGCATCAATGTaGAGAGAGTCCACCAACAGGCTTTGTGTGAGCAATAAAGCTGTT | + |
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Preference number: 5 (lower is better) Translates to: GPQSKSQHKMSRASM*RESTNRLCVSNKAV Trigger: AACAGCTTTATTGCTCACACAAAGCCTGTTGGTGGACTCTCTTCACATTGATGCGCGTGACATTTTGTGCTGTGACTTGGATTGGGGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561101.3 |
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| CDS TCA 72 bp | TCAGCCTCGCAAGCGGCTCTGCTAATCCCCCAGCCCTaGTCCCGCTCGCGGGTCCCGGTGGGTCTCACGCCT | + |
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Preference number: 6 (lower is better) Translates to: SASQAALLIPQP*SRSRVPVGLTP Trigger: AGGCGTGAGACCCACCGGGACCCGCGAGCGGGATCAGGGCTGGGGGATTAGCAGAGCCGCTTGCGAGGCTGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000561101.3 |
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| CDS CCA 72 bp | GTTCCTTGGGCTGGTTGGTCCGAAGACCCAAGGTCGTaGTGGATCTTTCTCCTGGAGCAAAGAGCAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: VPWAGWSEDPRS*WIFLLEQRAGG Trigger: TCCTCCTGCTCTTTGCTCCAGGAGAAAGATCCACCACGACCTTGGGTCTTCGGACCAACCAGCCCAAGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561101.3 |
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| CDS TCA 72 bp | CTTTCTCCTGGAGCAAAGAGCAGGAGGACAGGGGATTaGTCTCCCAAGGAAGGGCCCCCAATCCAAGTCACA | + |
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Preference number: 6 (lower is better) Translates to: LSPGAKSRRTGD*SPKEGPPIQVT Trigger: TGTGACTTGGATTGGGGGCCCTTCCTTGGGAGATCAATCCCCTGTCCTCCTGCTCTTTGCTCCAGGAGAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561101.3 |
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| CDS CAA 90 bp | CGTGGTGGATCTTTCTCCTGGAGCAAAGAGCAGGAGGACAGGGGATaGATCTCCCAAGGAAGGGCCCCCAATCCAAGTCACAGCACAAAA | + |
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Preference number: 6 (lower is better) Translates to: RGGSFSWSKEQEDRG*ISQGRAPNPSHSTK Trigger: TTTTGTGCTGTGACTTGGATTGGGGGCCCTTCCTTGGGAGATCAATCCCCTGTCCTCCTGCTCTTTGCTCCAGGAGAAAGATCCACCACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561101.3 |
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| CDS CCA 72 bp | ATATGTGGAGGGCACAGGGGATATGATGGCTTCGCTTaGGCTCAGAGGCCTGACATTCCTGTCCGATTTAAA | + |
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Preference number: 6 (lower is better) Translates to: ICGGHRGYDGFA*AQRPDIPVRFK Trigger: TTTAAATCGGACAGGAATGTCAGGCCTCTGAGCCCAAGCGAAGCCATCATATCCCCTGTGCCCTCCACATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561101.3 |
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| CDS CAA 72 bp | ATCGTATCACTGCACTCTAATGCATCTCCCCCTTGTTaGCTTGCAGGTCCTAAGACCCCTCCATCCCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: IVSLHSNASPPC*LAGPKTPPSQR Trigger: TCTCTGGGATGGAGGGGTCTTAGGACCTGCAAGCAAACAAGGGGGAGATGCATTAGAGTGCAGTGATACGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561101.3 |
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| CDS CAA 72 bp | GGGCTCAGAGGCCTGACATTCCTGTCCGATTTAAAATaGGTGAGATGTTCCTTGGGCTGGTTGGTCCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: GLRGLTFLSDLK*VRCSLGWLVRR Trigger: TCTTCGGACCAACCAGCCCAAGGAACATCTCACCAATTTTAAATCGGACAGGAATGTCAGGCCTCTGAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561101.3 |
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| CDS TCA 72 bp | TCCAAGTCACAGCACAAAATGTCACGCGCATCAATGTaGAGAGAGTCCACCAACAGGCTTTGTGTGAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: SKSQHKMSRASM*RESTNRLCVSN Trigger: ATTGCTCACACAAAGCCTGTTGGTGGACTCTCTTCACATTGATGCGCGTGACATTTTGTGCTGTGACTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561101.3 |
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| CDS TCA 72 bp | CATCAATGTGAAGAGAGTCCACCAACAGGCTTTGTGTaGGCAATAAAGCTGTTTATTTCACCTCAGTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: HQCEESPPTGFV*AIKLFISPQCR Trigger: CCTGCACTGAGGTGAAATAAACAGCTTTATTGCTCACACAAAGCCTGTTGGTGGACTCTCTTCACATTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561101.3 |
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