Pregenerated sensors for IDH1 (Homo sapiens)
Ensembl gene IDs: ENSG00000138413Ensembl transcript IDs: ENST00000415282.5, ENST00000415913.5, ENST00000451391.5, ENST00000462386.5, ENST00000484575.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGTGTGCGAGGGCGTGCCCCCGCTTCGCCGCCCGTTAGCAGGTCTTaGGGTTTGCATGTCCTTGCTCTTGGCCTGCACCCGTCCTTATGG | + |
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Preference number: 5 (lower is better) Translates to: RVRGRAPASPPVSRS*GLHVLALGLHPSLW Trigger: CCATAAGGACGGGTGCAGGCCAAGAGCAAGGACATGCAAACCCCAAGACCTGCTAACGGGCGGCGAAGCGGGGGCACGCCCTCGCACACG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000415282.5 ENST00000415913.5 |
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| CDS CCA 90 bp | GCACCCGTCCTTATGGCCGTTGTGCAAGAGGGCTGCAATCAAGGCTaGATCGGTACCTCCTTCCAGGTCTCCACGCCCGCCCCTCCCCTC | + |
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Preference number: 5 (lower is better) Translates to: APVLMAVVQEGCNQG*IGTSFQVSTPAPPL Trigger: GAGGGGAGGGGCGGGCGTGGAGACCTGGAAGGAGGTACCGATCCAGCCTTGATTGCAGCCCTCTTGCACAACGGCCATAAGGACGGGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000415282.5 ENST00000415913.5 |
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| CDS GCA 90 bp | TGCTCTTGGCCTGCACCCGTCCTTATGGCCGTTGTGCAAGAGGGCTaGAATCAAGGCTGGATCGGTACCTCCTTCCAGGTCTCCACGCCC | + |
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Preference number: 5 (lower is better) Translates to: CSWPAPVLMAVVQEG*NQGWIGTSFQVSTP Trigger: GGGCGTGGAGACCTGGAAGGAGGTACCGATCCAGCCTTGATTGCAGCCCTCTTGCACAACGGCCATAAGGACGGGTGCAGGCCAAGAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415282.5 ENST00000415913.5 |
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| CDS GCA 90 bp | CGCCCGTTAGCAGGTCTTGGGGTTTGCATGTCCTTGCTCTTGGCCTaGACCCGTCCTTATGGCCGTTGTGCAAGAGGGCTGCAATCAAGG | + |
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Preference number: 5 (lower is better) Translates to: RPLAGLGVCMSLLLA*TRPYGRCARGLQSR Trigger: CCTTGATTGCAGCCCTCTTGCACAACGGCCATAAGGACGGGTGCAGGCCAAGAGCAAGGACATGCAAACCCCAAGACCTGCTAACGGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415282.5 ENST00000415913.5 |
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| CDS GCA 90 bp | TTGCATGTCCTTGCTCTTGGCCTGCACCCGTCCTTATGGCCGTTGTaGAAGAGGGCTGCAATCAAGGCTGGATCGGTACCTCCTTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: LHVLALGLHPSLWPL*KRAAIKAGSVPPSR Trigger: CCTGGAAGGAGGTACCGATCCAGCCTTGATTGCAGCCCTCTTGCACAACGGCCATAAGGACGGGTGCAGGCCAAGAGCAAGGACATGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415282.5 ENST00000415913.5 |
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| CDS CCA 90 bp | TCTTGGGGTTTGCATGTCCTTGCTCTTGGCCTGCACCCGTCCTTATaGCCGTTGTGCAAGAGGGCTGCAATCAAGGCTGGATCGGTACCT | + |
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Preference number: 5 (lower is better) Translates to: SWGLHVLALGLHPSL*PLCKRAAIKAGSVP Trigger: AGGTACCGATCCAGCCTTGATTGCAGCCCTCTTGCACAACGGCCATAAGGACGGGTGCAGGCCAAGAGCAAGGACATGCAAACCCCAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415282.5 ENST00000415913.5 |
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| CDS TCA 90 bp | ATCGCCTGCCAGACAGCCCAGTTTATCCGGTTTAAAGTACAGTGCTaGGTGTACTCGGTGGGACAAAGGCCAATTTTAGGCCCGCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: IACQTAQFIRFKVQC*VYSVGQRPILGPQA Trigger: TGCCTGCGGGCCTAAAATTGGCCTTTGTCCCACCGAGTACACTCAGCACTGTACTTTAAACCGGATAAACTGGGCTGTCTGGCAGGCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415913.5 |
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| CDS TCA 90 bp | AGTACCTGCCAGACAGCCCAGTTTATCCGGTTTAAAGTACAGTGCTaGGTGTACTCGGTGGGACAAAGGCCAATTTTAGGCCCGCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: STCQTAQFIRFKVQC*VYSVGQRPILGPQA Trigger: TGCCTGCGGGCCTAAAATTGGCCTTTGTCCCACCGAGTACACTCAGCACTGTACTTTAAACCGGATAAACTGGGCTGTCTGGCAGGTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415282.5 |
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| CDS GCA 72 bp | GCCCAGAGCACCAAGCACCCATCCGTTGACCCCGCATaGGTGACGCTCACGCGCGCAGTCCCCCTGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: AQSTKHPSVDPA*VTLTRAVPLAS Trigger: AGAAGCCAGGGGGACTGCGCGCGTGAGCGTCACGCATGCGGGGTCAACGGATGGGTGCTTGGTGCTCTGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451391.5 |
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| CDS CCA 72 bp | GGGCGTGCCCCCGCTTCGCCGCCCGTTAGCAGGTCTTaGGGTTTGCATGTCCTTGCTCTTGGCCTGCACCCG | + |
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Preference number: 6 (lower is better) Translates to: GRAPASPPVSRS*GLHVLALGLHP Trigger: CGGGTGCAGGCCAAGAGCAAGGACATGCAAACCCCAAGACCTGCTAACGGGCGGCGAAGCGGGGGCACGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000415282.5 ENST00000415913.5 |
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| CDS CAA 90 bp | CGAGGGCGTGCCCCCGCTTCGCCGCCCGTTAGCAGGTCTTGGGGTTaGCATGTCCTTGCTCTTGGCCTGCACCCGTCCTTATGGCCGTTG | + |
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Preference number: 6 (lower is better) Translates to: RGRAPASPPVSRSWG*HVLALGLHPSLWPL Trigger: CAACGGCCATAAGGACGGGTGCAGGCCAAGAGCAAGGACATGCAAACCCCAAGACCTGCTAACGGGCGGCGAAGCGGGGGCACGCCCTCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000415282.5 ENST00000415913.5 |
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| CDS CAA 72 bp | GCCCCCGCTTCGCCGCCCGTTAGCAGGTCTTGGGGTTaGCATGTCCTTGCTCTTGGCCTGCACCCGTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: APASPPVSRSWG*HVLALGLHPSL Trigger: TAAGGACGGGTGCAGGCCAAGAGCAAGGACATGCAAACCCCAAGACCTGCTAACGGGCGGCGAAGCGGGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000415282.5 ENST00000415913.5 |
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| CDS CAA 90 bp | CCCCCGCTTCGCCGCCCGTTAGCAGGTCTTGGGGTTTGCATGTCCTaGCTCTTGGCCTGCACCCGTCCTTATGGCCGTTGTGCAAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: PPLRRPLAGLGVCMS*LLACTRPYGRCARG Trigger: CCCTCTTGCACAACGGCCATAAGGACGGGTGCAGGCCAAGAGCAAGGACATGCAAACCCCAAGACCTGCTAACGGGCGGCGAAGCGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000415282.5 ENST00000415913.5 |
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| CDS CCA 72 bp | CTTATGGCCGTTGTGCAAGAGGGCTGCAATCAAGGCTaGATCGGTACCTCCTTCCAGGTCTCCACGCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: LMAVVQEGCNQG*IGTSFQVSTPA Trigger: GGCGGGCGTGGAGACCTGGAAGGAGGTACCGATCCAGCCTTGATTGCAGCCCTCTTGCACAACGGCCATAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415282.5 ENST00000415913.5 |
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| CDS CAA 90 bp | CTTCGCCGCCCGTTAGCAGGTCTTGGGGTTTGCATGTCCTTGCTCTaGGCCTGCACCCGTCCTTATGGCCGTTGTGCAAGAGGGCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: LRRPLAGLGVCMSLL*ACTRPYGRCARGLQ Trigger: TTGCAGCCCTCTTGCACAACGGCCATAAGGACGGGTGCAGGCCAAGAGCAAGGACATGCAAACCCCAAGACCTGCTAACGGGCGGCGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415282.5 ENST00000415913.5 |
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| CDS GCA 72 bp | CCTGCACCCGTCCTTATGGCCGTTGTGCAAGAGGGCTaGAATCAAGGCTGGATCGGTACCTCCTTCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: PAPVLMAVVQEG*NQGWIGTSFQV Trigger: GACCTGGAAGGAGGTACCGATCCAGCCTTGATTGCAGCCCTCTTGCACAACGGCCATAAGGACGGGTGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415282.5 ENST00000415913.5 |
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| CDS GCA 72 bp | GCAGGTCTTGGGGTTTGCATGTCCTTGCTCTTGGCCTaGACCCGTCCTTATGGCCGTTGTGCAAGAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: AGLGVCMSLLLA*TRPYGRCARGL Trigger: CAGCCCTCTTGCACAACGGCCATAAGGACGGGTGCAGGCCAAGAGCAAGGACATGCAAACCCCAAGACCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415282.5 ENST00000415913.5 |
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| CDS CAA 90 bp | GGTTTGCATGTCCTTGCTCTTGGCCTGCACCCGTCCTTATGGCCGTaGTGCAAGAGGGCTGCAATCAAGGCTGGATCGGTACCTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: GLHVLALGLHPSLWP*CKRAAIKAGSVPPS Trigger: GGAAGGAGGTACCGATCCAGCCTTGATTGCAGCCCTCTTGCACAACGGCCATAAGGACGGGTGCAGGCCAAGAGCAAGGACATGCAAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415282.5 ENST00000415913.5 |
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| CDS GCA 72 bp | CTTGCTCTTGGCCTGCACCCGTCCTTATGGCCGTTGTaGAAGAGGGCTGCAATCAAGGCTGGATCGGTACCT | + |
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Preference number: 6 (lower is better) Translates to: LALGLHPSLWPL*KRAAIKAGSVP Trigger: AGGTACCGATCCAGCCTTGATTGCAGCCCTCTTGCACAACGGCCATAAGGACGGGTGCAGGCCAAGAGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415282.5 ENST00000415913.5 |
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| CDS GCA 72 bp | AATAAAGGTCATGGGAGCACAATTTATCTCTGCGTGTaGGAGGGCGTGCCCCCGCTTCGCCGCCCGTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: NKGHGSTIYLCV*EGVPPLRRPLA Trigger: TGCTAACGGGCGGCGAAGCGGGGGCACGCCCTCGCACACGCAGAGATAAATTGTGCTCCCATGACCTTTATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000415282.5 ENST00000415913.5 |
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| CDS CCA 72 bp | TTGCATGTCCTTGCTCTTGGCCTGCACCCGTCCTTATaGCCGTTGTGCAAGAGGGCTGCAATCAAGGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LHVLALGLHPSL*PLCKRAAIKAG Trigger: TCCAGCCTTGATTGCAGCCCTCTTGCACAACGGCCATAAGGACGGGTGCAGGCCAAGAGCAAGGACATGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415282.5 ENST00000415913.5 |
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| CDS GCA 72 bp | CGCTCCAGATATCAGAGCCAATGGGTCTGGAAAGGCTaGATTTTCCCCTCACTTATTTCAGGGATACCTACT | + |
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Preference number: 6 (lower is better) Translates to: RSRYQSQWVWKG*IFPSLISGIPT Trigger: AGTAGGTATCCCTGAAATAAGTGAGGGGAAAATGCAGCCTTTCCAGACCCATTGGCTCTGATATCTGGAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484575.1 |
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| CDS CAA 90 bp | GAAAGGCTGCATTTTCCCCTCACTTATTTCAGGGATACCTACTCCTaGATGGAGGGTTCAGGGTCCAACTGCCTACATTCCACTCTAGTT | + |
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Preference number: 6 (lower is better) Translates to: ERLHFPLTYFRDTYS*MEGSGSNCLHSTLV Trigger: AACTAGAGTGGAATGTAGGCAGTTGGACCCTGAACCCTCCATCAAGGAGTAGGTATCCCTGAAATAAGTGAGGGGAAAATGCAGCCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484575.1 |
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| CDS TCA 72 bp | ATTTTCCCCTCACTTATTTCAGGGATACCTACTCCTTaGTGGAGGGTTCAGGGTCCAACTGCCTACATTCCA | + |
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Preference number: 6 (lower is better) Translates to: IFPSLISGIPTP*WRVQGPTAYIP Trigger: TGGAATGTAGGCAGTTGGACCCTGAACCCTCCATCAAGGAGTAGGTATCCCTGAAATAAGTGAGGGGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484575.1 |
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| CDS CAA 90 bp | AAGAGCACTGAGTCTCTCAGAGATGAGAGCATAAATGACTCAATCTaGATAGGTCTTGGTAAGCAAAGTAAACAAGAGCACATGGAATCA | + |
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Preference number: 6 (lower is better) Translates to: KSTESLRDESINDSI*IGLGKQSKQEHMES Trigger: TGATTCCATGTGCTCTTGTTTACTTTGCTTACCAAGACCTATCAAGATTGAGTCATTTATGCTCTCATCTCTGAGAGACTCAGTGCTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484575.1 |
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| CDS CAA 72 bp | GAGTCTCTCAGAGATGAGAGCATAAATGACTCAATCTaGATAGGTCTTGGTAAGCAAAGTAAACAAGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: ESLRDESINDSI*IGLGKQSKQEH Trigger: GTGCTCTTGTTTACTTTGCTTACCAAGACCTATCAAGATTGAGTCATTTATGCTCTCATCTCTGAGAGACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484575.1 |
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| CDS TCA 72 bp | AAAACTTGTAAGGGGATCCTATTGTGCAGCCAGTGTTaGAAACCACAGATCTGGTTGAACCATATGAAATTA | + |
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Preference number: 6 (lower is better) Translates to: KTCKGILLCSQC*KPQIWLNHMKL Trigger: TAATTTCATATGGTTCAACCAGATCTGTGGTTTTCAACACTGGCTGCACAATAGGATCCCCTTACAAGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462386.5 |
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