RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ICA1L (Homo sapiens)

Ensembl gene IDs: ENSG00000163596

Ensembl transcript IDs: ENST00000358299.7, ENST00000392237.6, ENST00000411681.5, ENST00000412210.5, ENST00000416760.5, ENST00000418208.5, ENST00000419460.5, ENST00000421334.1, ENST00000425178.5, ENST00000432273.5, ENST00000435143.5, ENST00000437978.5, ENST00000438804.5, ENST00000441547.5, ENST00000450143.5, ENST00000454326.5, ENST00000457524.5, ENST00000476602.1, ENST00000484561.5, ENST00000494560.1, ENST00000617388.4

Found 646 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGGGAAACTTGTGGCAGGGGCCACCCATATCACACTGGGCCAGGTaGTCACAGCCTGTTTGTGGAGATGTTGAGGCAGCAAGAAAACCG +
Preference number: 1 (lower is better)
Translates to: KGNLWQGPPISHWAR*SQPVCGDVEAARKP
Trigger: CGGTTTTCTTGCTGCCTCAACATCTCCACAAACAGGCTGTGAGCACCTGGCCCAGTGTGATATGGGTGGCCCCTGCCACAAGTTTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR CCA 90 bp GCCTATACTGTACTTGGCCATTGTAGTAGTTTTCTGGAGAGCCTGTaGGCAGTTACTATTGTAGATGGCTATGGATGGGACATGGACTGC +
Preference number: 1 (lower is better)
Translates to: AYTVLGHCSSFLESL*AVTIVDGYGWDMDC
Trigger: GCAGTCCATGTCCCATCCATAGCCATCTACAATAGTAACTGCCCACAGGCTCTCCAGAAAACTACTACAATGGCCAAGTACAGTATAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR TCA 90 bp CATATCACACTGGGCCAGGTGCTCACAGCCTGTTTGTGGAGATGTTaGGGCAGCAAGAAAACCGGAAGTTTAAAACGTACACTACAAATG +
Preference number: 1 (lower is better)
Translates to: HITLGQVLTACLWRC*GSKKTGSLKRTLQM
Trigger: CATTTGTAGTGTACGTTTTAAACTTCCGGTTTTCTTGCTGCCTCAACATCTCCACAAACAGGCTGTGAGCACCTGGCCCAGTGTGATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR TCA 90 bp AGAACCTCAGATCATGTCACCCACAGAAAGAGGGAAGTAGAAAAATaGGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTCTGC +
Preference number: 1 (lower is better)
Translates to: RTSDHVTHRKREVEK*DTPLLITQSFLYVC
Trigger: GCAGACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCCCTCTTTCTGTGGGTGACATGATCTGAGGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR GCA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTaGGGGTTACAATCTAAATCCTTTCCACGAAGGAAATACGTTGCA +
Preference number: 1 (lower is better)
Translates to: KLADRCYIHKHRAFV*GLQSKSFPRRKYVA
Trigger: TGCAACGTATTTCCTTCGTGGAAAGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
3UTR TCA 90 bp GTGTACTTATTCAAATGTGGTCTTTACCATCTGTCTAAAGTTGGCTaGCAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTT +
Preference number: 1 (lower is better)
Translates to: VYLFKCGLYHLSKVG*QVLYSQTPCFCVRV
Trigger: AACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTTTAGACAGATGGTAAAGACCACATTTGAATAAGTACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
3UTR GCA 90 bp ATATTCCAAAATTCTGGGACTGCTTCATTGCTCAAGGTAGAGAAATaGAGGGCCCTGCCAACACTATGGAAGACAAAAATAACTGAATCA +
Preference number: 1 (lower is better)
Translates to: IFQNSGTASLLKVEK*RALPTLWKTKITES
Trigger: TGATTCAGTTATTTTTGTCTTCCATAGTGTTGGCAGGGCCCTGCATTTCTCTACCTTGAGCAATGAAGCAGTCCCAGAATTTTGGAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR CCA 90 bp GCTTCATTGCTCAAGGTAGAGAAATGCAGGGCCCTGCCAACACTATaGAAGACAAAAATAACTGAATCAATTCTGGCTCTCTTCTTTTTA +
Preference number: 1 (lower is better)
Translates to: ASLLKVEKCRALPTL*KTKITESILALFFL
Trigger: TAAAAAGAAGAGAGCCAGAATTGATTCAGTTATTTTTGTCTTCCATAGTGTTGGCAGGGCCCTGCATTTCTCTACCTTGAGCAATGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR GCA 90 bp AAATTTAGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTaGTTGTTAAAGTATCTGTATTCGATAACAGGGACTTCCTTGCAC +
Preference number: 1 (lower is better)
Translates to: KFRVFLVWTLGFCFV*LLKYLYSITGTSLH
Trigger: GTGCAAGGAAGTCCCTGTTATCGAATACAGATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCTAAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR TCA 90 bp GGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGAACAGTaGCAGTATTACATTCTGGGAAATTTCACTGAGTATAAAGGAAGA +
Preference number: 1 (lower is better)
Translates to: GIRNHDLGDWNLAEQ*QYYILGNFTEYKGR
Trigger: TCTTCCTTTATACTCAGTGAAATTTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR CCA 90 bp GAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTaGCAGAACAGTGACAGTATTACATTCTGGGAAATTTCACTGAGT +
Preference number: 1 (lower is better)
Translates to: EFRLGFVIMILVIGT*QNSDSITFWEISLS
Trigger: ACTCAGTGAAATTTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR TCA 90 bp ACGAAGGAAATACGTTGCAAAATTGATGTCTCAAGGCCACTGAAGTaGCATTATAACTTCAGTCAAGCATTAAGAAGTTCATCATCTGAG +
Preference number: 1 (lower is better)
Translates to: TKEIRCKIDVSRPLK*HYNFSQALRSSSSE
Trigger: CTCAGATGATGAACTTCTTAATGCTTGACTGAAGTTATAATGTCACTTCAGTGGCCTTGAGACATCAATTTTGCAACGTATTTCCTTCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438804.5
3UTR CCA 90 bp AATATAGTTACTGATATGCTCTTCAAAAACAGTGGTTGGACTTGTTaGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGG +
Preference number: 1 (lower is better)
Translates to: NIVTDMLFKNSGWTC*KLELDLLRKLMLLW
Trigger: CCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACAAGTCCAACCACTGTTTTTGAAGAGCATATCAGTAACTATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CCA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCCCACCCATATCACACTaGGCCAGGTGCTCACAGCCT +
Preference number: 2 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGPPISH*ARCSQP
Trigger: AGGCTGTGAGCACCTGGCCCAGTGTGATATGGGTGG...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR GCA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCCTCAAGGTAGAGAAATaGAGGGCCCTGCCAACACTA +
Preference number: 2 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGLKVEK*RALPTL
Trigger: TAGTGTTGGCAGGGCCCTGCATTTCTCTACCTTGAG...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR TCA 90 bp GGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGGGTCAGGGAGAAGCATTGGGCTTCTGGATGTaGCCCATCTTTACCAACCAT +
Preference number: 2 (lower is better)
Translates to: GERRGLRHGQEPLGQGEALGFWM*PIFTNH
Trigger: ATGGTTGGTAAAGATGGGTCACATCCAGAAGCCCAA...TGCTTCTCCCTGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR CAA 90 bp CAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTaGGGTCAGGGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTG +
Preference number: 2 (lower is better)
Translates to: QAGGERRGLRHGQEP*GQGEAHKKKRISLV
Trigger: CACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCCCTGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR TCA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTATGAAAAAGTGGGTCTaGAGACACTTGTACAAGCCT +
Preference number: 2 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFMKKWV*RHLYKP
Trigger: AGGCTTGTACAAGTGTCTTCAGACCCACTTTTTCAT...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR TCA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCCTGTCTAAAGTTGGCTaGCAGGTGTTATATTCACAA +
Preference number: 2 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGLSKVG*QVLYSQ
Trigger: TTGTGAATATAACACCTGTCAGCCAACTTTAGACAG...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR TCA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTTATTACTGTGCATTCTaGGTTTTAGGAGATGGGAAG +
Preference number: 2 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFYYCAF*VLGDGK
Trigger: CTTCCCATCTCCTAAAACTCAGAATGCACAGTAATA...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR TCA 90 bp GGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGGGTCAGGGAGAAGCACTGAGTCAATGTTTCTaGCCTTCAGATAAGGTCTTT +
Preference number: 2 (lower is better)
Translates to: GERRGLRHGQEPLGQGEALSQCF*PSDKVF
Trigger: AAAGACCTTATCTGAAGGTCAGAAACATTGACTCAG...TGCTTCTCCCTGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR GCA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTAATACTATTGCCAGTTaGTTAGGGAATATTCTCCCC +
Preference number: 2 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFNTIAS*LGNILP
Trigger: GGGGAGAATATTCCCTAAGCAACTGGCAATAGTATT...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR GCA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCAGGCATCTGCCACCATaGCCAGCTAATTTTTATATT +
Preference number: 2 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGRHLPP*PANFYI
Trigger: AATATAAAAATTAGCTGGGCATGGTGGCAGATGCCT...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR CCA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCAGTTACTATTGTAGATaGCTATGGATGGGACATGGA +
Preference number: 2 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGSYYCR*LWMGHG
Trigger: TCCATGTCCCATCCATAGCCATCTACAATAGTAACT...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR TCA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCATGGATTATCTAGATTaGGACAAAAAGCAACCAGTC +
Preference number: 2 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGMDYLD*DKKQPV
Trigger: GACTGGTTGCTTTTTGTCTCAATCTAGATAATCCAT...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR TCA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTTTACTCTTTGGCCAATaGGTAGTTAATTTACACCAC +
Preference number: 2 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFLLFGQ*VVNLHH
Trigger: GTGGTGTAAATTAACTACTCATTGGCCAAAGAGTAA...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR GCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCGCCATCTCAGCTCACTaGAAGCTCCGCCTCCCGGGT +
Preference number: 2 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFAISAH*KLRLPG
Trigger: ACCCGGGAGGCGGAGCTTGCAGTGAGCTGAGATGGC...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR TCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCATGGTCTCCATCTCCTaGCCTCGTGATCCGCCTGCC +
Preference number: 2 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFMVSIS*PRDPPA
Trigger: GGCAGGCGGATCACGAGGTCAGGAGATGGAGACCAT...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR TCA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGATGGTCTCCATCTCCTaGCCTCGTGATCCGCCTGCC +
Preference number: 2 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQMVSIS*PRDPPA
Trigger: GGCAGGCGGATCACGAGGTCAGGAGATGGAGACCAT...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR GCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAAGGGACTACAGGCACGTaGCACCACGCCTGGCTAATT +
Preference number: 2 (lower is better)
Translates to: MILVIGTWQNSDSITFWEGTTGT*HHAWLI
Trigger: AATTAGCCAGGCGTGGTGGCACGTGCCTGTAGTCCC...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCAGCCTCCGGAGTAGCTaGGACTACAGGCACGTGCCA +
Preference number: 2 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFSLRSS*DYRHVP
Trigger: TGGCACGTGCCTGTAGTCCCAGCTACTCCGGAGGCT...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR CAA 90 bp CCATATCACACTGGGCCAGGTGCTCACAGCCTGTTTGTGGAGATGTaGAGGCAGCAAGAAAACCGGAAGTTTAAAACGTACACTACAAAT +
Preference number: 2 (lower is better)
Translates to: PYHTGPGAHSLFVEM*RQQENRKFKTYTTN
Trigger: ATTTGTAGTGTACGTTTTAAACTTCCGGTTTTCTTGCTGCCTCAACATCTCCACAAACAGGCTGTGAGCACCTGGCCCAGTGTGATATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR GCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCGGGACTACAGGCACGTaGCACCACGCCTGGCTAATT +
Preference number: 2 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFGTTGT*HHAWLI
Trigger: AATTAGCCAGGCGTGGTGGCACGTGCCTGTAGTCCC...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR GCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCTTGCCTAGGCTGGAGTaGAGTGGCGCCATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFLPRLE*SGAISA
Trigger: AGCTGAGATGGCGCCACTGCACTCCAGCCTAGGCAA...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR GCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCGCAATCTCGACTCACTaGAACCTCTGCCGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFAISTH*NLCRLG
Trigger: ACCCAGGCGGCAGAGGTTGCAGTGAGTCGAGATTGC...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CCA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGAGCCTCCGGAGTAGCTaGGACTACAGGCACGTGCCA +
Preference number: 2 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRSLRSS*DYRHVP
Trigger: TGGCACGTGCCTGTAGTCCCAGCTACTCCGGAGGCT...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR GCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATCTGGTCTCGAACTCATaGCCTCAAATGTTCCACCCG +
Preference number: 2 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYLVSNS*PQMFHP
Trigger: CGGGTGGAACATTTGAGGGCATGAGTTCGAGACCAG...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR GCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATACTCACTGCAACCTCTaGCGCCTGGGTTCAAGCAAT +
Preference number: 2 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYTHCNL*RLGSSN
Trigger: ATTGCTTGAACCCAGGCGGCAGAGGTTGCAGTGAGT...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR GCA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACTGACATGTCTTGGTTaGCATTGTTGGGGGATCTTG +
Preference number: 2 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLLTCLG*HCWGIL
Trigger: CAAGATCCCCCAACAATGGCAACCAAGACATGTCAG...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438804.5
3UTR-3UTR GCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCCTGGTCTCGAACTCATaGCCTCAAATGTTCCACCCG +
Preference number: 2 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFLVSNS*PQMFHP
Trigger: CGGGTGGAACATTTGAGGGCATGAGTTCGAGACCAG...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR GCA 90 bp TGGAAAAATAGCTTATGTTGGGCTTCTGGATGTGACCCATCTTTACCAACCATTCTTGGCCTCCCAAAGTaGTGTTATATAGGCGTGAGC +
Preference number: 2 (lower is better)
Translates to: WKNSLCWASGCDPSLPTILGLPK*CYIGVS
Trigger: GCTCACGCCTATATAACAGCACTTTGGGAGGCCAAG...AATGGTTGGTAAAGATGGGTCACATCCAGAAGCCCAACATAAGCTATTTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR GCA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGTCACACTGGGCCAGGTaGTCACAGCCTGTTTGTGGA +
Preference number: 2 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRSHWAR*SQPVCG
Trigger: TCCACAAACAGGCTGTGAGCACCTGGCCCAGTGTGA...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR CCA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTCAGGCTGACATGTCTTaGTTGCCATTGTTGGGGGAT +
Preference number: 2 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPQADMS*LPLLGD
Trigger: ATCCCCCAACAATGGCAACCAAGACATGTCAGCCTG...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438804.5
3UTR CAA 90 bp AATGTTTCTGACCTTCAGATAAGGTCTTTCCAGCCTATACTGTACTaGGCCATTGTAGTAGTTTTCTGGAGAGCCTGTGGGCAGTTACTA +
Preference number: 2 (lower is better)
Translates to: NVSDLQIRSFQPILY*AIVVVFWRACGQLL
Trigger: TAGTAACTGCCCACAGGCTCTCCAGAAAACTACTACAATGGCCAAGTACAGTATAGGCTGGAAAGACCTTATCTGAAGGTCAGAAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR TCA 90 bp AACAGATTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTAATACGTTGCAAAATTaGTGTCTCAAGGCCACTGAA +
Preference number: 2 (lower is better)
Translates to: NRLNQADMSWLPLLGDLVNTLQN*CLKATE
Trigger: TTCAGTGGCCTTGAGACATCAATTTTGCAACGTATT...AACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAATCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438804.5
3UTR-3UTR TCA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACTGTCTAAAGTTGGCTaGCAGGTGTTATATTCACAA +
Preference number: 2 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLLSKVG*QVLYSQ
Trigger: TTGTGAATATAACACCTGTCAGCCAACTTTAGACAG...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
3UTR-3UTR GCA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTAAGTGGATCCAAGTCTaGAAACAGATTGAACCAGGC +
Preference number: 2 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPKWIQV*KQIEPG
Trigger: GCCTGGTTCAATCTGTTTGCAGACTTGGATCCACTT...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438804.5
3UTR CAA 90 bp GTCACCATGGGTATAGAATTCAGATTGGGATTCGTAATCATGATCTaGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGG +
Preference number: 2 (lower is better)
Translates to: VTMGIEFRLGFVIMI*VIGTWQNSDSITFW
Trigger: CCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTATACCCATGGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR CAA 90 bp TCAAAAGTTGAGAGCATCAGAGTCACCATGGGTATAGAATTCAGATaGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGAAC +
Preference number: 2 (lower is better)
Translates to: SKVESIRVTMGIEFR*GFVIMILVIGTWQN
Trigger: GTTCTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTATACCCATGGTGACTCTGATGCTCTCAACTTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR CAA 90 bp TTTAGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTaGTTAAAGTATCTGTATTCGATAACAGGGACTTCCTTGCACACA +
Preference number: 2 (lower is better)
Translates to: FRVFLVWTLGFCFVC*LKYLYSITGTSLHT
Trigger: TGTGTGCAAGGAAGTCCCTGTTATCGAATACAGATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR TCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCGAGACACTCCCTTATTaGTCACACAGAGCTTTCTGT +
Preference number: 2 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFETLPY*SHRAFC
Trigger: ACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTC...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR TCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAAGAGACACTCCCTTATTaGTCACACAGAGCTTTCTGT +
Preference number: 2 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKETLPY*SHRAFC
Trigger: ACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTC...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR TCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATAGGAAATTGAGTGATTaGTGTGTGTGTACGGTAGCT +
Preference number: 2 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYRKLSD*CVCTVA
Trigger: AGCTACCGTACACACACATCAATCACTCAATTTCCT...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR TCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATAACTTGGCAGAACAGTaGCAGTATTACATTCTGGGA +
Preference number: 2 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYNLAEQ*QYYILG
Trigger: TCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTT...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR GCA 90 bp AGATTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTAATACGAAGGAAATACGTTaGAAAATTGATGTCTCAAGG +
Preference number: 2 (lower is better)
Translates to: RLNQADMSWLPLLGDLVNTKEIR*KIDVSR
Trigger: CCTTGAGACATCAATTTTGCAACGTATTTCCTTCGT...ATTAACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438804.5
3UTR-3UTR GCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGACACCGTGCTTTTGTGTaGGGGTTACAATCTAAATCC +
Preference number: 2 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGHRAFV*GLQSKS
Trigger: GGATTTAGATTGTAACCCGCACACAAAAGCACGGTG...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCGCTATGGATGGGACATaGACTGCATTTTACCTACTC +
Preference number: 2 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFAMDGT*TAFYLL
Trigger: GAGTAGGTAAAATGCAGTCCATGTCCCATCCATAGC...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CCA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGGCTATGGATGGGACATaGACTGCATTTTACCTACTC +
Preference number: 2 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQAMDGT*TAFYLL
Trigger: GAGTAGGTAAAATGCAGTCCATGTCCCATCCATAGC...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATTATTGTAGATGGCTATaGATGGGACATGGACTGCAT +
Preference number: 2 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYYCRWL*MGHGLH
Trigger: ATGCAGTCCATGTCCCATCCATAGCCATCTACAATA...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CCA 90 bp TGGAAAAATAGCTTATGTTGGGCTTCTGGATGTGACCCATCTTTACCAACCATTAGGGTGTTCCTAGTATaGACTTTGGGTTTCTGCTTT +
Preference number: 2 (lower is better)
Translates to: WKNSLCWASGCDPSLPTIRVFLV*TLGFCF
Trigger: AAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT...AATGGTTGGTAAAGATGGGTCACATCCAGAAGCCCAACATAAGCTATTTTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR TCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATTATTACTGTGCATTCTaGGTTTTAGGAGATGGGAAG +
Preference number: 2 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYYYCAF*VLGDGK
Trigger: CTTCCCATCTCCTAAAACTCAGAATGCACAGTAATA...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR TCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAAATGAAAAAGTGGGTCTaGAGACACTTGTACAAGCCT +
Preference number: 2 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKMKKWV*RHLYKP
Trigger: AGGCTTGTACAAGTGTCTTCAGACCCACTTTTTCAT...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR TCA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGATGAAAAAGTGGGTCTaGAGACACTTGTACAAGCCT +
Preference number: 2 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQMKKWV*RHLYKP
Trigger: AGGCTTGTACAAGTGTCTTCAGACCCACTTTTTCAT...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR TCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAAAACTTGGCAGAACAGTaGCAGTATTACATTCTGGGA +
Preference number: 2 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKNLAEQ*QYYILG
Trigger: TCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTT...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR TCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATCAGATTGAACCAGGCTaGCATGTCTTGGTTGCCATT +
Preference number: 2 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYQIEPG*HVLVAI
Trigger: AATGGCAACCAAGACATGTCAGCCTGGTTCAATCTG...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438804.5
3UTR-3UTR GCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCTATTCACAAACACCGTaGTTTTGTGTGCGGGTTACA +
Preference number: 2 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSYSQTP*FCVRVT
Trigger: TGTAACCCGCACACAAAAGCACGGTGTTTGTGAATA...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
3UTR-3UTR GCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAATATTCACAAACACCGTaGTTTTGTGTGCGGGTTACA +
Preference number: 2 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKYSQTP*FCVRVT
Trigger: TGTAACCCGCACACAAAAGCACGGTGTTTGTGAATA...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATAACCCAAAACAAAGCTaGTCTGGTTCTAATGGTGTT +
Preference number: 2 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYNPKQS*SGSNGV
Trigger: AACACCATTAGAACCAGACCAGCTTTGTTTTGGGTT...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCGTAGATGGCTATGGATaGGACATGGACTGCATTTTA +
Preference number: 2 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFVDGYG*DMDCIL
Trigger: TAAAATGCAGTCCATGTCCCATCCATAGCCATCTAC...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CCA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGTTTCTGGAGAGCCTGTaGGCAGTTACTATTGTAGAT +
Preference number: 2 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQFLESL*AVTIVD
Trigger: ATCTACAATAGTAACTGCCCACAGGCTCTCCAGAAA...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAAATTGTAGTAGTTTTCTaGAGAGCCTGTGGGCAGTTA +
Preference number: 2 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKIVVVF*RACGQL
Trigger: TAACTGCCCACAGGCTCTCCAGAAAACTACTACAAT...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR CAA 90 bp AAGATGTGTACTTATTCAAATGTGGTCTTTACCATCTGTCTAAAGTaGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGC +
Preference number: 2 (lower is better)
Translates to: KMCTYSNVVFTICLK*ADRCYIHKHRAFVC
Trigger: GCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTTTAGACAGATGGTAAAGACCACATTTGAATAAGTACACATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
3UTR-3UTR TCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCCTGTCTAAAGTTGGCTaGCAGGTGTTATATTCACAA +
Preference number: 2 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFLSKVG*QVLYSQ
Trigger: TTGTGAATATAACACCTGTCAGCCAACTTTAGACAG...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR TCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATAAAAGGACAGGAAATTaGGTGATTGATGTGTGTGTA +
Preference number: 2 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYKRTGN*VIDVCV
Trigger: TACACACACATCAATCACTCAATTTCCTGTCCTTTT...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR GCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATACGAAGGAAATACGTTaGAAAATTGATGTCTCAAGG +
Preference number: 2 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYTKEIR*KIDVSR
Trigger: CCTTGAGACATCAATTTTGCAACGTATTTCCTTCGT...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR GCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAAACGAAGGAAATACGTTaGAAAATTGATGTCTCAAGG +
Preference number: 2 (lower is better)
Translates to: MILVIGTWQNSDSITFWETKEIR*KIDVSR
Trigger: CCTTGAGACATCAATTTTGCAACGTATTTCCTTCGT...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR GCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCAATACTATTGCCAGTTaGTTAGGGAATATTCTCCCC +
Preference number: 2 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFNTIAS*LGNILP
Trigger: GGGGAGAATATTCCCTAAGCAACTGGCAATAGTATT...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR GCA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGAGCTTTCTGTATGTCTaGCAGAAAGTATTCTGGGTT +
Preference number: 2 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQSFLYV*QKVFWV
Trigger: AACCCAGAATACTTTCTGGCAGACATACAGAAAGCT...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR GCA 90 bp TGGAAAAATAGCTTATGTTGGGCTTCTGGATGTGACCCATCTTTACCAACCATTGTCTTCTTATGGAAATaGAATGGACTGGATGACAAA +
Preference number: 2 (lower is better)
Translates to: WKNSLCWASGCDPSLPTIVFLWK*NGLDDK
Trigger: TTTGTCATCCAGTCCATTGCATTTCCATAAGAAGAC...AATGGTTGGTAAAGATGGGTCACATCCAGAAGCCCAACATAAGCTATTTTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR TCA 90 bp CAGATTTTGCTTAGTAATCAAATAGAACCTCAGATCATGTCACCCACAGAAAGAATGTCTCAAGGCCACTaGAGTGACATTATAACTTCA +
Preference number: 2 (lower is better)
Translates to: QILLSNQIEPQIMSPTERMSQGH*SDIITS
Trigger: TGAAGTTATAATGTCACTTCAGTGGCCTTGAGACAT...TCTTTCTGTGGGTGACATGATCTGAGGTTCTATTTGATTACTAAGCAAAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR TCA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGAATACGTTGCAAAATTaGTGTCTCAAGGCCACTGAA +
Preference number: 2 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRNTLQN*CLKATE
Trigger: TTCAGTGGCCTTGAGACATCAATTTTGCAACGTATT...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR TCA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGTATTACTGTGCATTCTaGGTTTTAGGAGATGGGAAG +
Preference number: 2 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRYYCAF*VLGDGK
Trigger: CTTCCCATCTCCTAAAACTCAGAATGCACAGTAATA...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR TCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCAAAAGGACAGGAAATTaGGTGATTGATGTGTGTGTA +
Preference number: 2 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFKRTGN*VIDVCV
Trigger: TACACACACATCAATCACTCAATTTCCTGTCCTTTT...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR GCA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATTATTCACAAACACCGTaGTTTTGTGTGCGGGTTACA +
Preference number: 2 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNYSQTP*FCVRVT
Trigger: TGTAACCCGCACACAAAAGCACGGTGTTTGTGAATA...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR GCA 90 bp CAGATTTTGCTTAGTAATCAAATAGAACCTCAGATCATGTCACCCACAGAAAGAAGCTTTCTGTATGTCTaGCAGAAAGTATTCTGGGTT +
Preference number: 2 (lower is better)
Translates to: QILLSNQIEPQIMSPTERSFLYV*QKVFWV
Trigger: AACCCAGAATACTTTCTGGCAGACATACAGAAAGCT...TCTTTCTGTGGGTGACATGATCTGAGGTTCTATTTGATTACTAAGCAAAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR GCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAAGTCTTCTTATGGAAATaGAATGGACTGGATGACAAA +
Preference number: 2 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKVFLWK*NGLDDK
Trigger: TTTGTCATCCAGTCCATTGCATTTCCATAAGAAGAC...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAACTGAGTTTTAGGAGATaGGAAGATAGATTTTTCTGT +
Preference number: 2 (lower is better)
Translates to: MILVIGTWQNSDSITFWELSFRR*EDRFFC
Trigger: ACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAG...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CCA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGGCCCTGCCAACACTATaGAAGACAAAAATAACTGAA +
Preference number: 2 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRALPTL*KTKITE
Trigger: TTCAGTTATTTTTGTCTTCCATAGTGTTGGCAGGGC...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR TCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATATGTCTCAAGGCCACTaGAGTGACATTATAACTTCA +
Preference number: 2 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYMSQGH*SDIITS
Trigger: TGAAGTTATAATGTCACTTCAGTGGCCTTGAGACAT...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
3UTR-3UTR TCA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATAATACGTTGCAAAATTaGTGTCTCAAGGCCACTGAA +
Preference number: 2 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNNTLQN*CLKATE
Trigger: TTCAGTGGCCTTGAGACATCAATTTTGCAACGTATT...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR TCA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGAATGCATTAGCAAGGTaGCCACTACAAAGAAAAATG +
Preference number: 2 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRNALAR*PLQRKM
Trigger: CATTTTTCTTTGTAGTGGTCACCTTGCTAATGCATT...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR GCA 90 bp CAGATTTTGCTTAGTAATCAAATAGAACCTCAGATCATGTCACCCACAGAAAGAACGAAGGAAATACGTTaGAAAATTGATGTCTCAAGG +
Preference number: 2 (lower is better)
Translates to: QILLSNQIEPQIMSPTERTKEIR*KIDVSR
Trigger: CCTTGAGACATCAATTTTGCAACGTATTTCCTTCGT...TCTTTCTGTGGGTGACATGATCTGAGGTTCTATTTGATTACTAAGCAAAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR GCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCTTTCAGGAATACTATTaGCAGTTGCTTAGGGAATAT +
Preference number: 2 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFFQEYY*QLLREY
Trigger: ATATTCCCTAAGCAACTGGCAATAGTATTCCTGAAA...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR GCA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGACACACTTGGGAAATTaGTTCAAAATTAAAGGGTGG +
Preference number: 2 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRTHLGN*FKIKGW
Trigger: CCACCCTTTAATTTTGAAGCAATTTCCCAAGTGTGT...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR CCA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGCTGAGTTTTAGGAGATaGGAAGATAGATTTTTCTGT +
Preference number: 2 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQLSFRR*EDRFFC
Trigger: ACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAG...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCTTCAAAAACAGTGGTTaGACTTGTTGGAAGTTAGAA +
Preference number: 2 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFFKNSG*TCWKLE
Trigger: TTCTAACTTCCAACAAGTCCAACCACTGTTTTTGAA...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR GCA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGTTTCAGGAATACTATTaGCAGTTGCTTAGGGAATAT +
Preference number: 2 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRFQEYY*QLLREY
Trigger: ATATTCCCTAAGCAACTGGCAATAGTATTCCTGAAA...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR CAA 90 bp GGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGGGTCAGGGAGAAGCAGGTAGCAAGGGAAACTaGTGGCAGGGGCCACCCATA +
Preference number: 3 (lower is better)
Translates to: GERRGLRHGQEPLGQGEAGSKGN*WQGPPI
Trigger: TATGGGTGGCCCCTGCCACAAGTTTCCCTTGCTACC...TGCTTCTCCCTGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR CCA 72 bp CAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATaGGCAGGAGCCTTTGGGTCAGGGAGAAGCACACAA +
Preference number: 3 (lower is better)
Translates to: QPSRWGAERPKT*AGAFGSGRSTQ
Trigger: TTGTGTGCTTCTCCCTGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR TCA 72 bp TACTCACAGGTCCTAGAGAGACCAGTCACTGCATGCTaGGAGGGGGTCACATGGGAGGGGGCTCAGCCAAGC +
Preference number: 3 (lower is better)
Translates to: YSQVLERPVTAC*EGVTWEGAQPS
Trigger: GCTTGGCTGAGCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACCTGTGAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR CAA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTCTGTTTGTGGAGATGTaGAGGCAGCAAGAAAACCGG +
Preference number: 3 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFLFVEM*RQQENR
Trigger: CCGGTTTTCTTGCTGCCTCAACATCTCCACAAACAG...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR CAA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCATAACAGGGACTTCCTaGCACACATGTGAGGGAGAT +
Preference number: 3 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGITGTS*HTCEGD
Trigger: ATCTCCCTCACATGTGTGCAAGGAAGTCCCTGTTAT...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR CAA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCTCTGGGACTGCTTCATaGCTCAAGGTAGAGAAATGC +
Preference number: 3 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGSGTAS*LKVEKC
Trigger: GCATTTCTCTACCTTGAGCAATGAAGCAGTCCCAGA...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR CAA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCACAAACACCGTGCTTTaGTGTGCGGGTTACAATCTA +
Preference number: 3 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGTNTVL*CAGYNL
Trigger: TAGATTGTAACCCGCACACAAAAGCACGGTGTTTGT...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR CAA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTACAAACACCGTGCTTTaGTGTGCGGGTTACAATCTA +
Preference number: 3 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFTNTVL*CAGYNL
Trigger: TAGATTGTAACCCGCACACAAAAGCACGGTGTTTGT...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR CAA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCTTCCTAGTATGGACTTaGGGTTTCTGCTTTGTCTGC +
Preference number: 3 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGFLVWT*GFCFVC
Trigger: GCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAA...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR CCA 72 bp AAGGGAAACTTGTGGCAGGGGCCACCCATATCACACTaGGCCAGGTGCTCACAGCCTGTTTGTGGAGATGTT +
Preference number: 3 (lower is better)
Translates to: KGNLWQGPPISH*ARCSQPVCGDV
Trigger: AACATCTCCACAAACAGGCTGTGAGCACCTGGCCCAGTGTGATATGGGTGGCCCCTGCCACAAGTTTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR CAA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCGAATACTATTGCCAGTaGCTTAGGGAATATTCTCCC +
Preference number: 3 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGEYYCQ*LREYSP
Trigger: GGGAGAATATTCCCTAAGCAACTGGCAATAGTATTC...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR CAA 90 bp GGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGGGTCAGGGAGAAGCAGAATACTATTGCCAGTaGCTTAGGGAATATTCTCCC +
Preference number: 3 (lower is better)
Translates to: GERRGLRHGQEPLGQGEAEYYCQ*LREYSP
Trigger: GGGAGAATATTCCCTAAGCAACTGGCAATAGTATTC...TGCTTCTCCCTGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR GCA 72 bp TGTAATATACTCACAGGTCCTAGAGAGACCAGTCACTaGATGCTGAGAGGGGGTCACATGGGAGGGGGCTCA +
Preference number: 3 (lower is better)
Translates to: CNILTGPRETSH*MLRGGHMGGGS
Trigger: TGAGCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACCTGTGAGTATATTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR CAA 90 bp GGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGGGTCAGGGAGAAGCACTTCAAAAACAGTGGTaGGACTTGTTGGAAGTTAGA +
Preference number: 3 (lower is better)
Translates to: GERRGLRHGQEPLGQGEALQKQW*DLLEVR
Trigger: TCTAACTTCCAACAAGTCCAACCACTGTTTTTGAAG...TGCTTCTCCCTGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR CAA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTAATAATAAAAGTCCCTaGTATGTCTCCATTTCGGGA +
Preference number: 3 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFNNKSP*YVSISG
Trigger: TCCCGAAATGGAGACATACAAGGGACTTTTATTATT...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR CCA 72 bp GGAGAGCCTGTGGGCAGTTACTATTGTAGATGGCTATaGATGGGACATGGACTGCATTTTACCTACTCTGGT +
Preference number: 3 (lower is better)
Translates to: GEPVGSYYCRWL*MGHGLHFTYSG
Trigger: ACCAGAGTAGGTAAAATGCAGTCCATGTCCCATCCATAGCCATCTACAATAGTAACTGCCCACAGGCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR TCA 72 bp AAGTGGATCCAAGTCTGCAAACAGATTGAACCAGGCTaGCATGTCTTGGTTGCCATTGTTGGGGGATCTTGT +
Preference number: 3 (lower is better)
Translates to: KWIQVCKQIEPG*HVLVAIVGGSC
Trigger: ACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAATCTGTTTGCAGACTTGGATCCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438804.5
3UTR CCA 72 bp GTACTTGGCCATTGTAGTAGTTTTCTGGAGAGCCTGTaGGCAGTTACTATTGTAGATGGCTATGGATGGGAC +
Preference number: 3 (lower is better)
Translates to: VLGHCSSFLESL*AVTIVDGYGWD
Trigger: GTCCCATCCATAGCCATCTACAATAGTAACTGCCCACAGGCTCTCCAGAAAACTACTACAATGGCCAAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR CCA 72 bp TTTTCTGGAGAGCCTGTGGGCAGTTACTATTGTAGATaGCTATGGATGGGACATGGACTGCATTTTACCTAC +
Preference number: 3 (lower is better)
Translates to: FSGEPVGSYYCR*LWMGHGLHFTY
Trigger: GTAGGTAAAATGCAGTCCATGTCCCATCCATAGCCATCTACAATAGTAACTGCCCACAGGCTCTCCAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR CCA 72 bp CTCAAGGTAGAGAAATGCAGGGCCCTGCCAACACTATaGAAGACAAAAATAACTGAATCAATTCTGGCTCTC +
Preference number: 3 (lower is better)
Translates to: LKVEKCRALPTL*KTKITESILAL
Trigger: GAGAGCCAGAATTGATTCAGTTATTTTTGTCTTCCATAGTGTTGGCAGGGCCCTGCATTTCTCTACCTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR CAA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATTGGGAGACCCAGTCCTaGGACTCAGTGATCCCATTC +
Preference number: 3 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYWETQS*DSVIPF
Trigger: GAATGGGATCACTGAGTCCAAGGACTGGGTCTCCCA...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438804.5
3UTR-3UTR CAA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTACAAACACCGTGCTTTaGTGTGCGGGTTACAATCTA +
Preference number: 3 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPTNTVL*CAGYNL
Trigger: TAGATTGTAACCCGCACACAAAAGCACGGTGTTTGT...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
3UTR GCA 72 bp GACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTaGGGGTTACAATCTAAATCCTTTCCACGAAGGAAA +
Preference number: 3 (lower is better)
Translates to: DRCYIHKHRAFV*GLQSKSFPRRK
Trigger: TTTCCTTCGTGGAAAGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
3UTR CCA 72 bp AAGTCTGCAAACAGATTGAACCAGGCTGACATGTCTTaGTTGCCATTGTTGGGGGATCTTGTTAATTTCTTT +
Preference number: 3 (lower is better)
Translates to: KSANRLNQADMS*LPLLGDLVNFF
Trigger: AAAGAAATTAACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAATCTGTTTGCAGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438804.5
3UTR-3UTR CAA 90 bp AGTGGCATCCATCATTTTGCCAGCTTGAGTTGCATCCCGTTCTGCTTGAAATTTTCCTCTGATATAACATaGAGTCTTAGCTGGTATTTC +
Preference number: 3 (lower is better)
Translates to: SGIHHFASLSCIPFCLKFSSDIT*SLSWYF
Trigger: GAAATACCAGCTAAGACTCAATGTTATATCAGAGGA...AAATTTCAAGCAGAACGGGATGCAACTCAAGCTGGCAAAATGATGGATGCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437978.5
3UTR-3UTR CAA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTATGTCTTGGTTGCCATaGTTGGGGGATCTTGTTAAT +
Preference number: 3 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPMSWLP*LGDLVN
Trigger: ATTAACAAGATCCCCCAACAATGGCAACCAAGACAT...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438804.5
3UTR-3UTR CAA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATACCATCTGTCTAAAGTaGGCTGACAGGTGTTATATT +
Preference number: 3 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYTICLK*ADRCYI
Trigger: AATATAACACCTGTCAGCCAACTTTAGACAGATGGT...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CAA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCCAGCCTATACTGTACTaGGCCATTGTAGTAGTTTTC +
Preference number: 3 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFQPILY*AIVVVF
Trigger: GAAAACTACTACAATGGCCAAGTACAGTATAGGCTG...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CAA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAACAGCCTATACTGTACTaGGCCATTGTAGTAGTTTTC +
Preference number: 3 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKQPILY*AIVVVF
Trigger: GAAAACTACTACAATGGCCAAGTACAGTATAGGCTG...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CAA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGCAGTGGTTGGACTTGTaGGAAGTTAGAACTGGACTT +
Preference number: 3 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRQWLDL*EVRTGL
Trigger: AAGTCCAGTTCTAACTTCCAACAAGTCCAACCACTG...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR CAA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTACCATCTGTCTAAAGTaGGCTGACAGGTGTTATATT +
Preference number: 3 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCTICLK*ADRCYI
Trigger: AATATAACACCTGTCAGCCAACTTTAGACAGATGGT...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CAA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTAAGCTCAACTCCATATaGACAGAATTATTCCTAGCC +
Preference number: 3 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCKLNSI*TELFLA
Trigger: GGCTAGGAATAATTCTGTCAATATGGAGTTGAGCTT...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CAA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCAAGCTCAACTCCATATaGACAGAATTATTCCTAGCC +
Preference number: 3 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFKLNSI*TELFLA
Trigger: GGCTAGGAATAATTCTGTCAATATGGAGTTGAGCTT...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CAA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGAAGCTCAACTCCATATaGACAGAATTATTCCTAGCC +
Preference number: 3 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQKLNSI*TELFLA
Trigger: GGCTAGGAATAATTCTGTCAATATGGAGTTGAGCTT...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CAA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGCAGCCTATACTGTACTaGGCCATTGTAGTAGTTTTC +
Preference number: 3 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRQPILY*AIVVVF
Trigger: GAAAACTACTACAATGGCCAAGTACAGTATAGGCTG...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR CAA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGTTCGTAATCATGATCTaGGTGATTGGAACTTGGCAG +
Preference number: 3 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRFVIMI*VIGTWQ
Trigger: CTGCCAAGTTCCAATCACCAAGATCATGATTACGAA...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR CAA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCCATTGTTGGGGGATCTaGTTAATTTCTTTGGACTCT +
Preference number: 3 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSHCWGI*LISLDS
Trigger: AGAGTCCAAAGAAATTAACAAGATCCCCCAACAATG...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438804.5
3UTR TCA 72 bp TTCAAATGTGGTCTTTACCATCTGTCTAAAGTTGGCTaGCAGGTGTTATATTCACAAACACCGTGCTTTTGT +
Preference number: 3 (lower is better)
Translates to: FKCGLYHLSKVG*QVLYSQTPCFC
Trigger: ACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTTTAGACAGATGGTAAAGACCACATTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
3UTR CCA 72 bp ACTGATATGCTCTTCAAAAACAGTGGTTGGACTTGTTaGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATG +
Preference number: 3 (lower is better)
Translates to: TDMLFKNSGWTC*KLELDLLRKLM
Trigger: CATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACAAGTCCAACCACTGTTTTTGAAGAGCATATCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CAA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAATTCTGCTTTGTCTGCTaGTTAAAGTATCTGTATTCG +
Preference number: 3 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKFCFVC*LKYLYS
Trigger: CGAATACAGATACTTTAACAAGCAGACAAAGCAGAA...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CAA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGCTAAGGAAGTTAATGTaGCTCTGGGTTAAATGGGAA +
Preference number: 3 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRLRKLM*LWVKWE
Trigger: TTCCCATTTAACCCAGAGCAACATTAACTTCCTTAG...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR-3UTR CAA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCAAGTTAGAACTGGACTaGCTAAGGAAGTTAATGTTG +
Preference number: 3 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFKLELD*LRKLML
Trigger: CAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTT...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR-3UTR CAA 90 bp CATTATAACTTCAGTCAAGCATTAAGAAGTTCATCATCTGAGTGTCCAATAGCATCTTGGTTGCCATTGTaGGGGGATCTTGTTAATTTC +
Preference number: 3 (lower is better)
Translates to: HYNFSQALRSSSSECPIASWLPL*GDLVNF
Trigger: GAAATTAACAAGATCCCCCAACAATGGCAACCAAGA...TGCTATTGGACACTCAGATGATGAACTTCTTAATGCTTGACTGAAGTTATAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438804.5
3UTR-3UTR CAA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGAAGTTAGAACTGGACTaGCTAAGGAAGTTAATGTTG +
Preference number: 3 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRKLELD*LRKLML
Trigger: CAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTT...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR TCA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCAAGGCTCCTGGGATGTaGGACTGGCACTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGKAPGM*DWHWGS
Trigger: GGAGCCCCAGTGCCAGTCTCACATCCCAGGAGCCTT...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGCAATCTCGACTCACTaGAACCTCTGCCGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFAISTH*NLCRLG
Trigger: ACCCAGGCGGCAGAGGTTGCAGTGAGTCGAGATTGC...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp GGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGGGTCAGGGAGAAGCAGAGAGGCCTAAGACATaGGCAGGAGCCTTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: GERRGLRHGQEPLGQGEAERPKT*AGAFGS
Trigger: TGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTC...TGCTTCTCCCTGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTCAGGCTGACATGTCTTaGTTGCCATTGTTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFQADMS*LPLLGD
Trigger: ATCCCCCAACAATGGCAACCAAGACATGTCAGCCTG...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR TCA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTATCATTTTGCCAGCTTaGGTTGCATCCCGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFIILPA*VASRSA
Trigger: AGCAGAACGGGATGCAACTCAAGCTGGCAAAATGAT...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTCTGACATGTCTTGGTTaGCATTGTTGGGGGATCTTG +
Preference number: 4 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFLTCLG*HCWGIL
Trigger: CAAGATCCCCCAACAATGGCAACCAAGACATGTCAG...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTAGAAATGCAGGGCCCTaGCAACACTATGGAAGACAA +
Preference number: 4 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFRNAGP*QHYGRQ
Trigger: TTGTCTTCCATAGTGTTGGCAGGGCCCTGCATTTCT...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp GGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGGGTCAGGGAGAAGCATCTGGGTCCAGCTCTTaGGATACATCTTTCATCCAC +
Preference number: 4 (lower is better)
Translates to: GERRGLRHGQEPLGQGEASGSSS*DTSFIH
Trigger: GTGGATGAAAGATGTATCCCAAGAGCTGGACCCAGA...TGCTTCTCCCTGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR TCA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTAGTCTGCAAACAGATTaGACCAGGCTGACATGTCTT +
Preference number: 4 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFSLQTD*TRLTCL
Trigger: AAGACATGTCAGCCTGGTTCAATCTGTTTGCAGACT...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR TCA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGAGACACTCCCTTATTaGTCACACAGAGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFETLPY*SHRAFC
Trigger: ACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTC...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCCACAGGGCCAATCTTTaGTTGGCTGAAGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGHRANL*LAEEQS
Trigger: ACTTTGTTCTTCAGCCAAGCAAAGATTGGCCCTGTG...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp GGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGGGTCAGGGAGAAGCATATTCTGTGCGTGCCTaGTCCATCCGATTAATTGTC +
Preference number: 4 (lower is better)
Translates to: GERRGLRHGQEPLGQGEAYSVRA*SIRLIV
Trigger: GACAATTAATCGGATGGAGCAGGCACGCACAGAATA...TGCTTCTCCCTGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCCACCGTGCTTTTGTGTaGGGGTTACAATCTAAATCC +
Preference number: 4 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGHRAFV*GLQSKS
Trigger: GGATTTAGATTGTAACCCGCACACAAAAGCACGGTG...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCCTCCCAAAGGCAGTCTaGCATTCTTGGGTAAATTCA +
Preference number: 4 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGLPKAV*HSWVNS
Trigger: TGAATTTACCCAAGAATGCCAGACTGCCTTTGGGAG...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR CAA 72 bp ATGTTACTAGGTCATGGGCAAGGTAGCAAGGGAAACTaGTGGCAGGGGCCACCCATATCACACTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: MLLGHGQGSKGN*WQGPPISHWAR
Trigger: CCTGGCCCAGTGTGATATGGGTGGCCCCTGCCACAAGTTTCCCTTGCTACCTTGCCCATGACCTAGTAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR TCA 90 bp GGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGGGTCAGGGAGAAGCAATACTGCCCTTTGACTaGATGTTGCTACTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: GERRGLRHGQEPLGQGEAILPFD*MLLLLA
Trigger: AGCAAGAAGTAGCAACATTCAGTCAAAGGGCAGTAT...TGCTTCTCCCTGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR TCA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCCCAATACAGGCTTCATaGATTTGGGACATCATTCGA +
Preference number: 4 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGPIQAS*IWDIIR
Trigger: TCGAATGATGTCCCAAATTCATGAAGCCTGTATTGG...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGGCGTGTCTTGTAGTTaGTTGAGAGCTACAAAATCA +
Preference number: 4 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFGVSCS*LRATKS
Trigger: TGATTTTGTAGCTCTCAAGCAACTACAAGACACGCC...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCGTAGATGGCTATGGATaGGACATGGACTGCATTTTA +
Preference number: 4 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGVDGYG*DMDCIL
Trigger: TAAAATGCAGTCCATGTCCCATCCATAGCCATCTAC...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCTATTGTAGATGGCTATaGATGGGACATGGACTGCAT +
Preference number: 4 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGYCRWL*MGHGLH
Trigger: ATGCAGTCCATGTCCCATCCATAGCCATCTACAATA...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp AGATTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTAATGAGCAGGGCCTCGCCTaGAAGAAGGCCGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RLNQADMSWLPLLGDLVNEQGLA*KKAAGS
Trigger: GCTGCCTGCGGCCTTCTTCCAGGCGAGGCCCTGCTC...ATTAACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR TCA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCACAAAATCATACGGATaGAAGCCAATACAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGTKSYG*KPIQAS
Trigger: TGAAGCCTGTATTGGCTTTCATCCGTATGATTTTGT...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR TCA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTAATACGTTGCAAAATTaGTGTCTCAAGGCCACTGAA +
Preference number: 4 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFNTLQN*CLKATE
Trigger: TTCAGTGGCCTTGAGACATCAATTTTGCAACGTATT...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp GGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGGGTCAGGGAGAAGCACTAAACTTTTCCATTTaGTTTAAGGTGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GERRGLRHGQEPLGQGEALNFSI*FKVSGS
Trigger: GGACCCAGACACCTTAAAGCAAATGGAAAAGTTTAG...TGCTTCTCCCTGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTTTCACTCTCAAAGCTTaGTTCCTCATCAGACAAAAC +
Preference number: 4 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFFTLKA*FLIRQN
Trigger: GTTTTGTCTGATGAGGAAGCAAGCTTTGAGAGTGAA...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp GGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGGGTCAGGGAGAAGCAGCAGTCTGGCATTCTTaGGTAAATTCACTAGTACTT +
Preference number: 4 (lower is better)
Translates to: GERRGLRHGQEPLGQGEAAVWHS*VNSLVL
Trigger: AAGTACTAGTGAATTTACCCAAGAATGCCAGACTGC...TGCTTCTCCCTGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCCTTGGTTGCCATTGTTaGGGGATCTTGTTAATTTCT +
Preference number: 4 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGLGCHC*GILLIS
Trigger: AGAAATTAACAAGATCCCCCAACAATGGCAACCAAG...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR TCA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCAATGCATTAGCAAGGTaGCCACTACAAAGAAAAATG +
Preference number: 4 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGNALAR*PLQRKM
Trigger: CATTTTTCTTTGTAGTGGTCACCTTGCTAATGCATT...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR TCA 90 bp GGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGGGTCAGGGAGAAGCAATGGATTATCTAGATTaGGACAAAAAGCAACCAGTC +
Preference number: 4 (lower is better)
Translates to: GERRGLRHGQEPLGQGEAMDYLD*DKKQPV
Trigger: GACTGGTTGCTTTTTGTCTCAATCTAGATAATCCAT...TGCTTCTCCCTGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTACGAAGGAAATACGTTaGAAAATTGATGTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFTKEIR*KIDVSR
Trigger: CCTTGAGACATCAATTTTGCAACGTATTTCCTTCGT...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTTGTCAAAAGAAGCTTTaGTATTTCTCACTTGCATCT +
Preference number: 4 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFCQKKL*YFSLAS
Trigger: AGATGCAAGTGAGAAATAGCAAAGCTTCTTTTGACA...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp GGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGGGTCAGGGAGAAGCAATTGTGATCTTTGTTTaGTTGTTCACTCTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: GERRGLRHGQEPLGQGEAIVIFV*LFTLKA
Trigger: AGCTTTGAGAGTGAACAAGCAAACAAAGATCACAAT...TGCTTCTCCCTGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp TTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTAATTTCAAACGAGCCCCAGGCTaGCGCGCTCCTTCACTACAG +
Preference number: 4 (lower is better)
Translates to: LNQADMSWLPLLGDLVNFKRAPG*RAPSLQ
Trigger: CTGTAGTGAAGGAGCGCGGCAGCCTGGGGCTCGTTT...GAAATTAACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR GCA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTAAAACGAGCCCCAGGCTaGCGCGCTCCTTCACTACAG +
Preference number: 4 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLKRAPG*RAPSLQ
Trigger: CTGTAGTGAAGGAGCGCGGCAGCCTGGGGCTCGTTT...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438804.5
ENST00000617388.4
CDS-3UTR TCA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGCGTTCGGCCGTACGGTaGTCCGTCCCGGCACCCGTT +
Preference number: 4 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRRSAVR*SVPAPV
Trigger: AACGGGTGCCGGGACGGATCACCGTACGGCCGAACG...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358299.7
CDS-3UTR TCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATAAGGCTCCTGGGATGTaGGACTGGCACTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYKAPGM*DWHWGS
Trigger: GGAGCCCCAGTGCCAGTCTCACATCCCAGGAGCCTT...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTAAGGAATCGAGAAGAATaGGCGAGGGGCTCAGACCCC +
Preference number: 4 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLRNREE*ARGSDP
Trigger: GGGGTCTGAGCCCCTCGCTCATTCTTCTCGATTCCT...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATCCCTCCGGCAGCCAGTaGCCCTCCGCACCAGTGCGT +
Preference number: 4 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNPSGSQ*PSAPVR
Trigger: ACGCACTGGTGCGGAGGGGCACTGGCTGCCGGAGGG...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358299.7
CDS-3UTR GCA 90 bp GCTCTTGGGATACATCTTTCATCCACAGTAGAGCTCCTCTGTATTCTGTGCGTGCTCCTCTGTATTCTGTaGGTGCCTGCTCCATCCGAT +
Preference number: 4 (lower is better)
Translates to: ALGIHLSSTVELLCILCVLLCIL*VPAPSD
Trigger: ATCGGATGGAGCAGGCACGCACAGAATACAGAGGAG...CACGCACAGAATACAGAGGAGCTCTACTGTGGATGAAAGATGTATCCCAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418208.5
CDS-3UTR GCA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTATTGCCTAGGCTGGAGTaGAGTGGCGCCATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLLPRLE*SGAISA
Trigger: AGCTGAGATGGCGCCACTGCACTCCAGCCTAGGCAA...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTAGCAATCTCGACTCACTaGAACCTCTGCCGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLAISTH*NLCRLG
Trigger: ACCCAGGCGGCAGAGGTTGCAGTGAGTCGAGATTGC...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATGAGACCAGGCCTCACTaGGCCTCCAACAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYETRPH*ASNSQG
Trigger: ACCCTGGCTGTTGGAGGCGCAGTGAGGCCTGGTCTC...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGTCACTACAGCGAGCGTaGCCGGGAGGCGCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRSLQRA*PGGALP
Trigger: CGGAAGGGCGCCTCCCGGCCACGCTCGCTGTAGTGA...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617388.4
CDS-3UTR TCA 90 bp GCCAGTGGCATCCATCATTTTGCCAGCTTGAGTTGCATCCCGTTCTGCTTGAAAATCATTTTGCCAGCTTaGGTTGCATCCCGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ASGIHHFASLSCIPFCLKIILPA*VASRSA
Trigger: AGCAGAACGGGATGCAACTCAAGCTGGCAAAATGAT...TTTCAAGCAGAACGGGATGCAACTCAAGCTGGCAAAATGATGGATGCCACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437978.5
CDS-3UTR TCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCAAGGCTCCTGGGATGTaGGACTGGCACTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFKAPGM*DWHWGS
Trigger: GGAGCCCCAGTGCCAGTCTCACATCCCAGGAGCCTT...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp CCAGCTCTTGGGATACATCTTTCATCCACAGTAGAGCTCCTCTGTATTCTGTGCACTCCTACTAAAGGATaGGGCACCTGTGGCTATTCC +
Preference number: 4 (lower is better)
Translates to: PALGIHLSSTVELLCILCTPTKG*GTCGYS
Trigger: GGAATAGCCACAGGTGCCTCATCCTTTAGTAGGAGT...GCACAGAATACAGAGGAGCTCTACTGTGGATGAAAGATGTATCCCAAGAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418208.5
CDS-3UTR GCA 90 bp CTGGGTCCAGCTCTTGGGATACATCTTTCATCCACAGTAGAGCTCCTCTGTATTTCTTCTGGTCTGGGTTaGCCAAAGGAATCCATGGAG +
Preference number: 4 (lower is better)
Translates to: LGPALGIHLSSTVELLCISSGLG*PKESME
Trigger: CTCCATGGATTCCTTTGGGCAACCCAGACCAGAAGA...AATACAGAGGAGCTCTACTGTGGATGAAAGATGTATCCCAAGAGCTGGACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418208.5
CDS-3UTR CCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAAAGCCTCCGGAGTAGCTaGGACTACAGGCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWESLRSS*DYRHVP
Trigger: TGGCACGTGCCTGTAGTCCCAGCTACTCCGGAGGCT...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATAGCCTCCGGAGTAGCTaGGACTACAGGCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYSLRSS*DYRHVP
Trigger: TGGCACGTGCCTGTAGTCCCAGCTACTCCGGAGGCT...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAAGCTCAGCCAAGCAGGTaGGGAGCGGAGAGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKAQPSR*GAERPK
Trigger: CTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATGAGCAGGGCCTCGCCTaGAAGAAGGCCGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYEQGLA*KKAAGS
Trigger: GCTGCCTGCGGCCTTCTTCCAGGCGAGGCCCTGCTC...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CCA 90 bp CATTATAACTTCAGTCAAGCATTAAGAAGTTCATCATCTGAGTGTCCAATAGCATCACTACAGCGAGCGTaGCCGGGAGGCGCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: HYNFSQALRSSSSECPIASLQRA*PGGALP
Trigger: CGGAAGGGCGCCTCCCGGCCACGCTCGCTGTAGTGA...TGCTATTGGACACTCAGATGATGAACTTCTTAATGCTTGACTGAAGTTATAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR TCA 90 bp CATCTTTCATCCACAGTAGAGCTCCTCTGTATTCTGTGCGTGCCTGCTCCATCCATACTGCCCTTTGACTaGATGTTGCTACTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: HLSSTVELLCILCVPAPSILPFD*MLLLLA
Trigger: AGCAAGAAGTAGCAACATTCAGTCAAAGGGCAGTAT...GGATGGAGCAGGCACGCACAGAATACAGAGGAGCTCTACTGTGGATGAAAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418208.5
CDS-3UTR TCA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTAGGAATCGAGAAGAATaGGCGAGGGGCTCAGACCCC +
Preference number: 4 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPRNREE*ARGSDP
Trigger: GGGGTCTGAGCCCCTCGCTCATTCTTCTCGATTCCT...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR TCA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTCCAGTCACTGCATGCTaGGAGGGGGTCACATGGGAG +
Preference number: 4 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCPVTAC*EGVTWE
Trigger: CTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGG...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR TCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCCCAGTCACTGCATGCTaGGAGGGGGTCACATGGGAG +
Preference number: 4 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFPVTAC*EGVTWE
Trigger: CTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGG...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp AAGGTGTCTGGGTCCAGCTCTTGGGATACATCTTTCATCCACAGTAGAGCTCCTTATTCTGTGCGTGCCTaGTCCATCCGATTAATTGTC +
Preference number: 4 (lower is better)
Translates to: KVSGSSSWDTSFIHSRAPYSVRA*SIRLIV
Trigger: GACAATTAATCGGATGGAGCAGGCACGCACAGAATA...AGGAGCTCTACTGTGGATGAAAGATGTATCCCAAGAGCTGGACCCAGACACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418208.5
CDS-3UTR GCA 90 bp TTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTAATTTCCTCCTCTGTATTCTGTaGGTGCCTGCTCCATCCGAT +
Preference number: 4 (lower is better)
Translates to: LNQADMSWLPLLGDLVNFLLCIL*VPAPSD
Trigger: ATCGGATGGAGCAGGCACGCACAGAATACAGAGGAG...GAAATTAACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR GCA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACTGGTCTCGAACTCATaGCCTCAAATGTTCCACCCG +
Preference number: 4 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLLVSNS*PQMFHP
Trigger: CGGGTGGAACATTTGAGGGCATGAGTTCGAGACCAG...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp CAGATTTTGCTTAGTAATCAAATAGAACCTCAGATCATGTCACCCACAGAAAGAGAGACCAGGCCTCACTaGGCCTCCAACAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: QILLSNQIEPQIMSPTERETRPH*ASNSQG
Trigger: ACCCTGGCTGTTGGAGGCGCAGTGAGGCCTGGTCTC...TCTTTCTGTGGGTGACATGATCTGAGGTTCTATTTGATTACTAAGCAAAATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp GCCAGTGGCATCCATCATTTTGCCAGCTTGAGTTGCATCCCGTTCTGCTTGAAAGATTATCTTCTGGTCTaGGTTGCCCAAAGGAATCCA +
Preference number: 4 (lower is better)
Translates to: ASGIHHFASLSCIPFCLKDYLLV*VAQRNP
Trigger: TGGATTCCTTTGGGCAACCCAGACCAGAAGATAATC...TTTCAAGCAGAACGGGATGCAACTCAAGCTGGCAAAATGATGGATGCCACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437978.5
CDS-3UTR CCA 90 bp AGCTCCTCTGTATTCTGTGCGTGCCTGCTCCATCCGATTAATTGTCATCAAGGTTCTGGGTCCAGCTCTTaGGATACATCTTTCATCCAC +
Preference number: 4 (lower is better)
Translates to: SSSVFCACLLHPINCHQGSGSSS*DTSFIH
Trigger: GTGGATGAAAGATGTATCCCAAGAGCTGGACCCAGA...ACCTTGATGACAATTAATCGGATGGAGCAGGCACGCACAGAATACAGAGGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418208.5
CDS-3UTR CCA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTCCCATGGAAGGCTCCTaGGATGTGAGACTGGCACTG +
Preference number: 4 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPPMEGS*DVRLAL
Trigger: CAGTGCCAGTCTCACATCCCAGGAGCCTTCCATGGG...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAAAGCCTCCGGAGTAGCTaGGACTACAGGCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKSLRSS*DYRHVP
Trigger: TGGCACGTGCCTGTAGTCCCAGCTACTCCGGAGGCT...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTCCAGGCTGGAGTGCATaGCCTGATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPPGWSA*PDLSSL
Trigger: CAGTGAGCTGAGATCAGGCCATGCACTCCAGCCTGG...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATCCACCCATATCACACTaGGCCAGGTGCTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYPPISH*ARCSQP
Trigger: AGGCTGTGAGCACCTGGCCCAGTGTGATATGGGTGG...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp CAGATTTTGCTTAGTAATCAAATAGAACCTCAGATCATGTCACCCACAGAAAGAGCTCAGCCAAGCAGGTaGGGAGCGGAGAGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: QILLSNQIEPQIMSPTERAQPSR*GAERPK
Trigger: CTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC...TCTTTCTGTGGGTGACATGATCTGAGGTTCTATTTGATTACTAAGCAAAATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp ATACATCTTTCATCCACAGTAGAGCTCCTCTGTATTCTGTGCGTGCCTGCTCCAGCCCAAAGGAATCCATaGAGTGACATTCGGAGATGT +
Preference number: 4 (lower is better)
Translates to: IHLSSTVELLCILCVPAPAQRNP*SDIRRC
Trigger: ACATCTCCGAATGTCACTCCATGGATTCCTTTGGGC...TGGAGCAGGCACGCACAGAATACAGAGGAGCTCTACTGTGGATGAAAGATGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418208.5
CDS-3UTR TCA 90 bp AGTAGAGCTCCTCTGTATTCTGTGCGTGCCTGCTCCATCCGATTAATTGTCATCCTTCTGACTACTGACTaGTTATCTTCTGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SRAPLYSVRACSIRLIVILLTTD*LSSGLG
Trigger: ACCCAGACCAGAAGATAATCAGTCAGTAGTCAGAAG...GATGACAATTAATCGGATGGAGCAGGCACGCACAGAATACAGAGGAGCTCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418208.5
CDS-3UTR TCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATAAGGCTCCTGGGATGTaGGACTGGCACTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYKAPGM*DWHWGS
Trigger: GGAGCCCCAGTGCCAGTCTCACATCCCAGGAGCCTT...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR TCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAAGGGAGACCCAGTTGTTaGACGCTCCAGCCACATGAA +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWEGRPSC*TLQPHE
Trigger: TTCATGTGGCTGGAGCGTTCAACAACTGGGTCTCCC...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp AGTGGCATCCATCATTTTGCCAGCTTGAGTTGCATCCCGTTCTGCTTGAAATTTACTCCTACTAAAGGATaGGGCACCTGTGGCTATTCC +
Preference number: 4 (lower is better)
Translates to: SGIHHFASLSCIPFCLKFTPTKG*GTCGYS
Trigger: GGAATAGCCACAGGTGCCTCATCCTTTAGTAGGAGT...AAATTTCAAGCAGAACGGGATGCAACTCAAGCTGGCAAAATGATGGATGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437978.5
CDS-3UTR TCA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTAACTCCTACTAAAGGATaGGGCACCTGTGGCTATTCC +
Preference number: 4 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLTPTKG*GTCGYS
Trigger: GGAATAGCCACAGGTGCCTCATCCTTTAGTAGGAGT...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392237.6
ENST00000438804.5
CDS-3UTR GCA 90 bp AGTGGCATCCATCATTTTGCCAGCTTGAGTTGCATCCCGTTCTGCTTGAAATTTTCTTCTGGTCTGGGTTaGCCAAAGGAATCCATGGAG +
Preference number: 4 (lower is better)
Translates to: SGIHHFASLSCIPFCLKFSSGLG*PKESME
Trigger: CTCCATGGATTCCTTTGGGCAACCCAGACCAGAAGA...AAATTTCAAGCAGAACGGGATGCAACTCAAGCTGGCAAAATGATGGATGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437978.5
CDS-3UTR GCA 90 bp CTGGGTCCAGCTCTTGGGATACATCTTTCATCCACAGTAGAGCTCCTCTGTATTTCTGTATTCTGTGCGTaGCTGCTCCATCCGATTAAT +
Preference number: 4 (lower is better)
Translates to: LGPALGIHLSSTVELLCISVFCA*LLHPIN
Trigger: ATTAATCGGATGGAGCAGGCACGCACAGAATACAGA...AATACAGAGGAGCTCTACTGTGGATGAAAGATGTATCCCAAGAGCTGGACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418208.5
CDS-3UTR GCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGATTGCCTAGGCTGGAGTaGAGTGGCGCCATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGLPRLE*SGAISA
Trigger: AGCTGAGATGGCGCCACTGCACTCCAGCCTAGGCAA...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGGCAATCTCGACTCACTaGAACCTCTGCCGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQAISTH*NLCRLG
Trigger: ACCCAGGCGGCAGAGGTTGCAGTGAGTCGAGATTGC...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTTCACACTGGGCCAGGTaGTCACAGCCTGTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPSHWAR*SQPVCG
Trigger: TCCACAAACAGGCTGTGAGCACCTGGCCCAGTGTGA...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp CCAGCTCTTGGGATACATCTTTCATCCACAGTAGAGCTCCTCTGTATTCTGTGCGATTATCTTCTGGTCTaGGTTGCCCAAAGGAATCCA +
Preference number: 4 (lower is better)
Translates to: PALGIHLSSTVELLCILCDYLLV*VAQRNP
Trigger: TGGATTCCTTTGGGCAACCCAGACCAGAAGATAATC...GCACAGAATACAGAGGAGCTCTACTGTGGATGAAAGATGTATCCCAAGAGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418208.5
CDS-3UTR CCA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGCCCATGGAAGGCTCCTaGGATGTGAGACTGGCACTG +
Preference number: 4 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQPMEGS*DVRLAL
Trigger: CAGTGCCAGTCTCACATCCCAGGAGCCTTCCATGGG...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCCCCATGGAAGGCTCCTaGGATGTGAGACTGGCACTG +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSPMEGS*DVRLAL
Trigger: CAGTGCCAGTCTCACATCCCAGGAGCCTTCCATGGG...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCCCAGGCTGGAGTGCATaGCCTGATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFPGWSA*PDLSSL
Trigger: CAGTGAGCTGAGATCAGGCCATGCACTCCAGCCTGG...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCCCACCCATATCACACTaGGCCAGGTGCTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFPPISH*ARCSQP
Trigger: AGGCTGTGAGCACCTGGCCCAGTGTGATATGGGTGG...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATCTTGCGGGTTTTGCCTaGGGGGAGGCCGGAAGAACC +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYLAGFA*GEAGRT
Trigger: GGTTCTTCCGGCCTCCCCCCAGGCAAAACCCGCAAG...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CCA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATCTTGCGGGTTTTGCCTaGGGGGAGGCCGGAAGAACC +
Preference number: 4 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNLAGFA*GEAGRT
Trigger: GGTTCTTCCGGCCTCCCCCCAGGCAAAACCCGCAAG...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000617388.4
3UTR CAA 72 bp GACCTTCAGATAAGGTCTTTCCAGCCTATACTGTACTaGGCCATTGTAGTAGTTTTCTGGAGAGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: DLQIRSFQPILY*AIVVVFWRACG
Trigger: CCCACAGGCTCTCCAGAAAACTACTACAATGGCCAAGTACAGTATAGGCTGGAAAGACCTTATCTGAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp TTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTAATTTCATCATTTTGCCAGCTTaGGTTGCATCCCGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LNQADMSWLPLLGDLVNFIILPA*VASRSA
Trigger: AGCAGAACGGGATGCAACTCAAGCTGGCAAAATGAT...GAAATTAACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR TCA 90 bp CCAGCTCTTGGGATACATCTTTCATCCACAGTAGAGCTCCTCTGTATTCTGTGCTCAGATACTGCCCTTTaGCTGAATGTTGCTACTTCT +
Preference number: 4 (lower is better)
Translates to: PALGIHLSSTVELLCILCSDTAL*LNVATS
Trigger: AGAAGTAGCAACATTCAGTCAAAGGGCAGTATCTGA...GCACAGAATACAGAGGAGCTCTACTGTGGATGAAAGATGTATCCCAAGAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418208.5
CDS-3UTR TCA 90 bp AGATTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTAATTTTCTTTGGACTCTGTaGAGGCACTGGCTGGTTATC +
Preference number: 4 (lower is better)
Translates to: RLNQADMSWLPLLGDLVNFLWTL*RHWLVI
Trigger: GATAACCAGCCAGTGCCTTCACAGAGTCCAAAGAAA...ATTAACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR TCA 90 bp TGCCAGCTTGAGTTGCATCCCGTTCTGCTTGAAATTTTAAAAAGAGCCCTAGCTAACGGATGGGTGGGATaGGACTTCAGCTTTATTGGA +
Preference number: 4 (lower is better)
Translates to: CQLELHPVLLEILKRALANGWVG*DFSFIG
Trigger: TCCAATAAAGCTGAAGTCTCATCCCACCCATCCGTT...AGCTAGGGCTCTTTTTAAAATTTCAAGCAGAACGGGATGCAACTCAAGCTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437978.5
CDS-3UTR GCA 90 bp CAGTGGCATCCATCATTTTGCCAGCTTGAGTTGCATCCCGTTCTGCTTGAAATTTTTGCCAGCTTGAGTTaGATCCCGTTCTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: QWHPSFCQLELHPVLLEIFASLS*IPFCLK
Trigger: TTTCAAGCAGAACGGGATGCAACTCAAGCTGGCAAA...AATTTCAAGCAGAACGGGATGCAACTCAAGCTGGCAAAATGATGGATGCCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437978.5
CDS-3UTR GCA 90 bp TGCCAGCTTGAGTTGCATCCCGTTCTGCTTGAAATTTTAAAAAGAGCCCTAGCTTGGCATCCATCATTTTaGCAGCTTGAGTTGCATCCC +
Preference number: 4 (lower is better)
Translates to: CQLELHPVLLEILKRALAWHPSF*QLELHP
Trigger: GGGATGCAACTCAAGCTGGCAAAATGATGGATGCCA...AGCTAGGGCTCTTTTTAAAATTTCAAGCAGAACGGGATGCAACTCAAGCTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437978.5
CDS-3UTR GCA 90 bp ATACATCTTTCATCCACAGTAGAGCTCCTCTGTATTCTGTGCGTGCCTGCTCCAAATGTTGCTACTTCTTaGTTCAGACGAGACAGAGGA +
Preference number: 4 (lower is better)
Translates to: IHLSSTVELLCILCVPAPNVATS*FRRDRG
Trigger: TCCTCTGTCTCGTCTGAAGCAAGAAGTAGCAACATT...TGGAGCAGGCACGCACAGAATACAGAGGAGCTCTACTGTGGATGAAAGATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418208.5
CDS-3UTR GCA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTCTCCTCTGTATTCTGTaGGTGCCTGCTCCATCCGAT +
Preference number: 4 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPLLCIL*VPAPSD
Trigger: ATCGGATGGAGCAGGCACGCACAGAATACAGAGGAG...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTTCACACTGGGCCAGGTaGTCACAGCCTGTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCSHWAR*SQPVCG
Trigger: TCCACAAACAGGCTGTGAGCACCTGGCCCAGTGTGA...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp GCCAGTGGCATCCATCATTTTGCCAGCTTGAGTTGCATCCCGTTCTGCTTGAAATCTTCAGAAGTTCAGTaGATGTCTCTCAAGTTTAGC +
Preference number: 4 (lower is better)
Translates to: ASGIHHFASLSCIPFCLKSSEVQ*MSLKFS
Trigger: GCTAAACTTGAGAGACATGCACTGAACTTCTGAAGA...TTTCAAGCAGAACGGGATGCAACTCAAGCTGGCAAAATGATGGATGCCACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437978.5
CDS-3UTR CCA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGGCCCAAAGGAATCCATaGAGTGACGGCGCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRAQRNP*SDGAAL
Trigger: AAGAGCGGCGCCGTCACTCCATGGATTCCTTTGGGC...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358299.7
3UTR CAA 72 bp TCTGGGTTTGAAAGTGGATCCAAGTCTGCAAACAGATaGAACCAGGCTGACATGTCTTGGTTGCCATTGTTG +
Preference number: 4 (lower is better)
Translates to: SGFESGSKSANR*NQADMSWLPLL
Trigger: CAACAATGGCAACCAAGACATGTCAGCCTGGTTCAATCTGTTTGCAGACTTGGATCCACTTTCAAACCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR TCA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATAGGAATCGAGAAGAATaGGCGAGGGGCTCAGACCCC +
Preference number: 4 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNRNREE*ARGSDP
Trigger: GGGGTCTGAGCCCCTCGCTCATTCTTCTCGATTCCT...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATAGGAATCGAGAAGAATaGGCGAGGGGCTCAGACCCC +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYRNREE*ARGSDP
Trigger: GGGGTCTGAGCCCCTCGCTCATTCTTCTCGATTCCT...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp AGATTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTAATTTTGCCAGCTTGAGTTaGATCCCGTTCTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: RLNQADMSWLPLLGDLVNFASLS*IPFCLK
Trigger: TTTCAAGCAGAACGGGATGCAACTCAAGCTGGCAAA...ATTAACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR GCA 90 bp TTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTAATTTCCACAGGGCCAATCTTTaGTTGGCTGAAGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: LNQADMSWLPLLGDLVNFHRANL*LAEEQS
Trigger: ACTTTGTTCTTCAGCCAAGCAAAGATTGGCCCTGTG...GAAATTAACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR GCA 90 bp AACAGATTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTAATGTTGCTACTTCTTaGTTCAGACGAGACAGAGGA +
Preference number: 4 (lower is better)
Translates to: NRLNQADMSWLPLLGDLVNVATS*FRRDRG
Trigger: TCCTCTGTCTCGTCTGAAGCAAGAAGTAGCAACATT...AACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAATCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR GCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCCTCCTCTGTATTCTGTaGGTGCCTGCTCCATCCGAT +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSLLCIL*VPAPSD
Trigger: ATCGGATGGAGCAGGCACGCACAGAATACAGAGGAG...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTAAAGTGGATCCAAGTCTaGAAACAGATTGAACCAGGC +
Preference number: 4 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLKWIQV*KQIEPG
Trigger: GCCTGGTTCAATCTGTTTGCAGACTTGGATCCACTT...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATTTGCCTAGGCTGGAGTaGAGTGGCGCCATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNLPRLE*SGAISA
Trigger: AGCTGAGATGGCGCCACTGCACTCCAGCCTAGGCAA...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGACTGGTCTCGAACTCATaGCCTCAAATGTTCCACCCG +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGLVSNS*PQMFHP
Trigger: CGGGTGGAACATTTGAGGGCATGAGTTCGAGACCAG...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACTCACTGCAACCTCTaGCGCCTGGGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSTHCNL*RLGSSN
Trigger: ATTGCTTGAACCCAGGCGGCAGAGGTTGCAGTGAGT...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGACTCACTGCAACCTCTaGCGCCTGGGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQTHCNL*RLGSSN
Trigger: ATTGCTTGAACCCAGGCGGCAGAGGTTGCAGTGAGT...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAACTCAAGGTAGAGAAATaGAGGGCCCTGCCAACACTA +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWELKVEK*RALPTL
Trigger: TAGTGTTGGCAGGGCCCTGCATTTCTCTACCTTGAG...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACTCCCAAAGGCAGTCTaGCATTCTTGGGTAAATTCA +
Preference number: 4 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLLPKAV*HSWVNS
Trigger: TGAATTTACCCAAGAATGCCAGACTGCCTTTGGGAG...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CCA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGGAGAGGCCTAAGACATaGGCAGGAGCCTTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRERPKT*AGAFGS
Trigger: TGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTC...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp TGCCAGCTTGAGTTGCATCCCGTTCTGCTTGAAATTTTAAAAAGAGCCCTAGCTCTGATAACGGATGGGTaGGATGAGACTTCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: CQLELHPVLLEILKRALALITDG*DETSAL
Trigger: TAAAGCTGAAGTCTCATCCCACCCATCCGTTATCAG...AGCTAGGGCTCTTTTTAAAATTTCAAGCAGAACGGGATGCAACTCAAGCTGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437978.5
CDS-3UTR TCA 90 bp AACAGATTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTACAAAATCATACGGATaGAAGCCAATACAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: NRLNQADMSWLPLLGDLVTKSYG*KPIQAS
Trigger: TGAAGCCTGTATTGGCTTTCATCCGTATGATTTTGT...AACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAATCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR TCA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATGGGAGACCCAGTTGTTaGACGCTCCAGCCACATGAA +
Preference number: 4 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNGRPSC*TLQPHE
Trigger: TTCATGTGGCTGGAGCGTTCAACAACTGGGTCTCCC...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp TGGAAAAATAGCTTATGTTGGGCTTCTGGATGTGACCCATCTTTACCAACCATTTTTCTTTGGACTCTGTaGAGGCACTGGCTGGTTATC +
Preference number: 4 (lower is better)
Translates to: WKNSLCWASGCDPSLPTIFLWTL*RHWLVI
Trigger: GATAACCAGCCAGTGCCTTCACAGAGTCCAAAGAAA...AATGGTTGGTAAAGATGGGTCACATCCAGAAGCCCAACATAAGCTATTTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR TCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAACAGATTGAACCAGGCTaGCATGTCTTGGTTGCCATT +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWEQIEPG*HVLVAI
Trigger: AATGGCAACCAAGACATGTCAGCCTGGTTCAATCTG...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTCAGATTGAACCAGGCTaGCATGTCTTGGTTGCCATT +
Preference number: 4 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPQIEPG*HVLVAI
Trigger: AATGGCAACCAAGACATGTCAGCCTGGTTCAATCTG...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR TCA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTAAACTTGGCAGAACAGTaGCAGTATTACATTCTGGGA +
Preference number: 4 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLNLAEQ*QYYILG
Trigger: TCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTT...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAATTGGGCTTCTGGATGTaGCCCATCTTTACCAACCAT +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWELGFWM*PIFTNH
Trigger: ATGGTTGGTAAAGATGGGTCACATCCAGAAGCCCAA...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR TCA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGACTCCTACTAAAGGATaGGGCACCTGTGGCTATTCC +
Preference number: 4 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQTPTKG*GTCGYS
Trigger: GGAATAGCCACAGGTGCCTCATCCTTTAGTAGGAGT...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392237.6
CDS-3UTR GCA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTTCTTCTGGTCTGGGTTaGCCAAAGGAATCCATGGAG +
Preference number: 4 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCSSGLG*PKESME
Trigger: CTCCATGGATTCCTTTGGGCAACCCAGACCAGAAGA...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGTCTTCTGGTCTGGGTTaGCCAAAGGAATCCATGGAG +
Preference number: 4 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQSSGLG*PKESME
Trigger: CTCCATGGATTCCTTTGGGCAACCCAGACCAGAAGA...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAATGGCATCCATCATTTTaGCAGCTTGAGTTGCATCCC +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWEWHPSF*QLELHP
Trigger: GGGATGCAACTCAAGCTGGCAAAATGATGGATGCCA...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp TTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTAATTTCAAGAACAAAGTGCCTTaGCAGTGGCATCCATCATTT +
Preference number: 4 (lower is better)
Translates to: LNQADMSWLPLLGDLVNFKNKVP*QWHPSF
Trigger: AAATGATGGATGCCACTGGCAAGGCACTTTGTTCTT...GAAATTAACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR GCA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTAGGCGTGTCTTGTAGTTaGTTGAGAGCTACAAAATCA +
Preference number: 4 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLGVSCS*LRATKS
Trigger: TGATTTTGTAGCTCTCAAGCAACTACAAGACACGCC...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp TTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTAATTTCTATTCACAAACACCGTaGTTTTGTGTGCGGGTTACA +
Preference number: 4 (lower is better)
Translates to: LNQADMSWLPLLGDLVNFYSQTP*FCVRVT
Trigger: TGTAACCCGCACACAAAAGCACGGTGTTTGTGAATA...GAAATTAACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR GCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCCTTGGCCTCCCAAAGTaGTGTTATATAGGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSLGLPK*CYIGVS
Trigger: GCTCACGCCTATATAACAGCACTTTGGGAGGCCAAG...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGACTTGGCCTCCCAAAGTaGTGTTATATAGGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGLGLPK*CYIGVS
Trigger: GCTCACGCCTATATAACAGCACTTTGGGAGGCCAAG...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCCTCAAGGTAGAGAAATaGAGGGCCCTGCCAACACTA +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSLKVEK*RALPTL
Trigger: TAGTGTTGGCAGGGCCCTGCATTTCTCTACCTTGAG...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp GCCAGTGGCATCCATCATTTTGCCAGCTTGAGTTGCATCCCGTTCTGCTTGAAAACATTGAGTCTTAGCTaGTATTTCTCGATTATCTTC +
Preference number: 4 (lower is better)
Translates to: ASGIHHFASLSCIPFCLKTLSLS*YFSIIF
Trigger: GAAGATAATCGAGAAATACCAGCTAAGACTCAATGT...TTTCAAGCAGAACGGGATGCAACTCAAGCTGGCAAAATGATGGATGCCACTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437978.5
CDS-3UTR CCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATGGGCCAATCTTTGCTTaGCTGAAGAACAAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYGPIFA*LKNKVP
Trigger: AGGCACTTTGTTCTTCAGCCAAGCAAAGATTGGCCC...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAATCTGGGTCCAGCTCTTaGGATACATCTTTCATCCAC +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWESGSSS*DTSFIH
Trigger: GTGGATGAAAGATGTATCCCAAGAGCTGGACCCAGA...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTTCTGGGTCCAGCTCTTaGGATACATCTTTCATCCAC +
Preference number: 4 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPSGSSS*DTSFIH
Trigger: GTGGATGAAAGATGTATCCCAAGAGCTGGACCCAGA...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CCA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGCAGGCTGACATGTCTTaGTTGCCATTGTTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQQADMS*LPLLGD
Trigger: ATCCCCCAACAATGGCAACCAAGACATGTCAGCCTG...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTAGCCCAAAGGAATCCATaGAGTGACACGTTAAAAAGA +
Preference number: 4 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLAQRNP*SDTLKR
Trigger: TCTTTTTAACGTGTCACTCCATGGATTCCTTTGGGC...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617388.4
3UTR CAA 72 bp TCTGCAAACAGATTGAACCAGGCTGACATGTCTTGGTaGCCATTGTTGGGGGATCTTGTTAATTTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: SANRLNQADMSW*PLLGDLVNFFG
Trigger: TCCAAAGAAATTAACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAATCTGTTTGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR TCA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTCTTCTGACTACTGACTaGTTATCTTCTGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPLLTTD*LSSGLG
Trigger: ACCCAGACCAGAAGATAATCAGTCAGTAGTCAGAAG...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR TCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCATCATTTTGCCAGCTTaGGTTGCATCCCGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFIILPA*VASRSA
Trigger: AGCAGAACGGGATGCAACTCAAGCTGGCAAAATGAT...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTATCATTTTGCCAGCTTaGGTTGCATCCCGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCIILPA*VASRSA
Trigger: AGCAGAACGGGATGCAACTCAAGCTGGCAAAATGAT...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTAACAAAATCATACGGATaGAAGCCAATACAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLTKSYG*KPIQAS
Trigger: TGAAGCCTGTATTGGCTTTCATCCGTATGATTTTGT...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR TCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAACAGATTGAACCAGGCTaGCATGTCTTGGTTGCCATT +
Preference number: 4 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKQIEPG*HVLVAI
Trigger: AATGGCAACCAAGACATGTCAGCCTGGTTCAATCTG...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAAAGTCTGCAAACAGATTaGACCAGGCTGACATGTCTT +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWESLQTD*TRLTCL
Trigger: AAGACATGTCAGCCTGGTTCAATCTGTTTGCAGACT...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTTTGCAGCATTATTGTTaGACGCTCCAGCCACATGAA +
Preference number: 4 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPLQHYC*TLQPHE
Trigger: TTCATGTGGCTGGAGCGTTCAACAATAATGCTGCAA...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR GCA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTTTTGCCAGCTTGAGTTaGATCCCGTTCTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPFASLS*IPFCLK
Trigger: TTTCAAGCAGAACGGGATGCAACTCAAGCTGGCAAA...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGATGGCATCCATCATTTTaGCAGCTTGAGTTGCATCCC +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGWHPSF*QLELHP
Trigger: GGGATGCAACTCAAGCTGGCAAAATGATGGATGCCA...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCTGGCATCCATCATTTTaGCAGCTTGAGTTGCATCCC +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSWHPSF*QLELHP
Trigger: GGGATGCAACTCAAGCTGGCAAAATGATGGATGCCA...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAATGGCATCCATCATTTTaGCAGCTTGAGTTGCATCCC +
Preference number: 4 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKWHPSF*QLELHP
Trigger: GGGATGCAACTCAAGCTGGCAAAATGATGGATGCCA...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTCACAGGGCCAATCTTTaGTTGGCTGAAGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPHRANL*LAEEQS
Trigger: ACTTTGTTCTTCAGCCAAGCAAAGATTGGCCCTGTG...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAATCTGTATTCTGTGCGTaGCTGCTCCATCCGATTAAT +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWESVFCA*LLHPIN
Trigger: ATTAATCGGATGGAGCAGGCACGCACAGAATACAGA...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATTCTGTATTCTGTGCGTaGCTGCTCCATCCGATTAAT +
Preference number: 4 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYSVFCA*LLHPIN
Trigger: ATTAATCGGATGGAGCAGGCACGCACAGAATACAGA...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATCTCCTCTGTATTCTGTaGGTGCCTGCTCCATCCGAT +
Preference number: 4 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNLLCIL*VPAPSD
Trigger: ATCGGATGGAGCAGGCACGCACAGAATACAGAGGAG...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp AGATTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTAATCTAAACTTTTCCATTTaGTTTAAGGTGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RLNQADMSWLPLLGDLVNLNFSI*FKVSGS
Trigger: GGACCCAGACACCTTAAAGCAAATGGAAAAGTTTAG...ATTAACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR GCA 90 bp TTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTAATTTCTTCACTCTCAAAGCTTaGTTCCTCATCAGACAAAAC +
Preference number: 4 (lower is better)
Translates to: LNQADMSWLPLLGDLVNFFTLKA*FLIRQN
Trigger: GTTTTGTCTGATGAGGAAGCAAGCTTTGAGAGTGAA...GAAATTAACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR GCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAACTGACATGTCTTGGTTaGCATTGTTGGGGGATCTTG +
Preference number: 4 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKLTCLG*HCWGIL
Trigger: CAAGATCCCCCAACAATGGCAACCAAGACATGTCAG...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCCTGACATGTCTTGGTTaGCATTGTTGGGGGATCTTG +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSLTCLG*HCWGIL
Trigger: CAAGATCCCCCAACAATGGCAACCAAGACATGTCAG...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGAAGAAATGCAGGGCCCTaGCAACACTATGGAAGACAA +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGRNAGP*QHYGRQ
Trigger: TTGTCTTCCATAGTGTTGGCAGGGCCCTGCATTTCT...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGACGCTGCTCCACTTCTTaGTTCTTTGATGTGTCATCC +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGRCSTS*FFDVSS
Trigger: GGATGACACATCAAAGAAGCAAGAAGTGGAGCAGCG...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGAGGGCCAATCTTTGCTTaGCTGAAGAACAAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGGPIFA*LKNKVP
Trigger: AGGCACTTTGTTCTTCAGCCAAGCAAAGATTGGCCC...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATCTCCCAAAGGCAGTCTaGCATTCTTGGGTAAATTCA +
Preference number: 4 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYLPKAV*HSWVNS
Trigger: TGAATTTACCCAAGAATGCCAGACTGCCTTTGGGAG...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp TTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTAATTTCCTTGGTTGCCATTGTTaGGGGATCTTGTTAATTTCT +
Preference number: 4 (lower is better)
Translates to: LNQADMSWLPLLGDLVNFLGCHC*GILLIS
Trigger: AGAAATTAACAAGATCCCCCAACAATGGCAACCAAG...GAAATTAACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR CCA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGGCCCAAAGGAATCCATaGAGTGACATTCGGAGATGT +
Preference number: 4 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQAQRNP*SDIRRC
Trigger: ACATCTCCGAATGTCACTCCATGGATTCCTTTGGGC...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392237.6
3UTR CAA 72 bp GAGAGCATCAGAGTCACCATGGGTATAGAATTCAGATaGGGATTCGTAATCATGATCTTGGTGATTGGAACT +
Preference number: 4 (lower is better)
Translates to: ESIRVTMGIEFR*GFVIMILVIGT
Trigger: AGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTATACCCATGGTGACTCTGATGCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp CTTGAGTTGCATCCCGTTCTGCTTGAAATTTTAAAAAGAGCCCTAGCTCATTTTCTTCTGACTACTGACTaGTTATCTTCTGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LELHPVLLEILKRALAHFLLTTD*LSSGLG
Trigger: ACCCAGACCAGAAGATAATCAGTCAGTAGTCAGAAG...AAAATGAGCTAGGGCTCTTTTTAAAATTTCAAGCAGAACGGGATGCAACTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437978.5
CDS-3UTR TCA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTATACTGCCCTTTGACTaGATGTTGCTACTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPILPFD*MLLLLA
Trigger: AGCAAGAAGTAGCAACATTCAGTCAAAGGGCAGTAT...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR TCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAAATACTGCCCTTTGACTaGATGTTGCTACTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWEILPFD*MLLLLA
Trigger: AGCAAGAAGTAGCAACATTCAGTCAAAGGGCAGTAT...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATTCAGATACTGCCCTTTaGCTGAATGTTGCTACTTCT +
Preference number: 4 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYSDTAL*LNVATS
Trigger: AGAAGTAGCAACATTCAGTCAAAGGGCAGTATCTGA...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTTCAGAGTTAGAAAACTaGGGTGCTCCAAATTCTCTC +
Preference number: 4 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPSELEN*GAPNSL
Trigger: GAGAGAATTTGGAGCACCTCAGTTTTCTAACTCTGA...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR TCA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTATGAAAAAGTGGGTCTaGAGACACTTGTACAAGCCT +
Preference number: 4 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPMKKWV*RHLYKP
Trigger: AGGCTTGTACAAGTGTCTTCAGACCCACTTTTTCAT...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCGAGACACTCCCTTATTaGTCACACAGAGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSETLPY*SHRAFC
Trigger: ACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTC...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAAAACTTGGCAGAACAGTaGCAGTATTACATTCTGGGA +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWENLAEQ*QYYILG
Trigger: TCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTT...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGATTTGCCAGCTTGAGTTaGATCCCGTTCTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGFASLS*IPFCLK
Trigger: TTTCAAGCAGAACGGGATGCAACTCAAGCTGGCAAA...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATAAGAACAAAGTGCCTTaGCAGTGGCATCCATCATTT +
Preference number: 4 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYKNKVP*QWHPSF
Trigger: AAATGATGGATGCCACTGGCAAGGCACTTTGTTCTT...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGACACAGGGCCAATCTTTaGTTGGCTGAAGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGHRANL*LAEEQS
Trigger: ACTTTGTTCTTCAGCCAAGCAAAGATTGGCCCTGTG...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTAATGTTGCTACTTCTTaGTTCAGACGAGACAGAGGA +
Preference number: 4 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPNVATS*FRRDRG
Trigger: TCCTCTGTCTCGTCTGAAGCAAGAAGTAGCAACATT...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCTATTCTGTGCGTGCCTaGTCCATCCGATTAATTGTC +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSYSVRA*SIRLIV
Trigger: GACAATTAATCGGATGGAGCAGGCACGCACAGAATA...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGTCTGTATTCTGTGCGTaGCTGCTCCATCCGATTAAT +
Preference number: 4 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQSVFCA*LLHPIN
Trigger: ATTAATCGGATGGAGCAGGCACGCACAGAATACAGA...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCTCTGTATTCTGTGCGTaGCTGCTCCATCCGATTAAT +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSSVFCA*LLHPIN
Trigger: ATTAATCGGATGGAGCAGGCACGCACAGAATACAGA...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATGGCGTGTCTTGTAGTTaGTTGAGAGCTACAAAATCA +
Preference number: 4 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYGVSCS*LRATKS
Trigger: TGATTTTGTAGCTCTCAAGCAACTACAAGACACGCC...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGCTGACATGTCTTGGTTaGCATTGTTGGGGGATCTTG +
Preference number: 4 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRLTCLG*HCWGIL
Trigger: CAAGATCCCCCAACAATGGCAACCAAGACATGTCAG...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTAAGTGGATCCAAGTCTaGAAACAGATTGAACCAGGC +
Preference number: 4 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCKWIQV*KQIEPG
Trigger: GCCTGGTTCAATCTGTTTGCAGACTTGGATCCACTT...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAACACCGTGCTTTTGTGTaGGGGTTACAATCTAAATCC +
Preference number: 4 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKHRAFV*GLQSKS
Trigger: GGATTTAGATTGTAACCCGCACACAAAAGCACGGTG...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCCACCGTGCTTTTGTGTaGGGGTTACAATCTAAATCC +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSHRAFV*GLQSKS
Trigger: GGATTTAGATTGTAACCCGCACACAAAAGCACGGTG...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATTATTCACAAACACCGTaGTTTTGTGTGCGGGTTACA +
Preference number: 4 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYYSQTP*FCVRVT
Trigger: TGTAACCCGCACACAAAAGCACGGTGTTTGTGAATA...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGCGCTGCTCCACTTCTTaGTTCTTTGATGTGTCATCC +
Preference number: 4 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRRCSTS*FFDVSS
Trigger: GGATGACACATCAAAGAAGCAAGAAGTGGAGCAGCG...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp CATTATAACTTCAGTCAAGCATTAAGAAGTTCATCATCTGAGTGTCCAATAGCACAGGCTGACATGTCTTaGTTGCCATTGTTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: HYNFSQALRSSSSECPIAQADMS*LPLLGD
Trigger: ATCCCCCAACAATGGCAACCAAGACATGTCAGCCTG...TGCTATTGGACACTCAGATGATGAACTTCTTAATGCTTGACTGAAGTTATAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR CCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATCAGGCTGACATGTCTTaGTTGCCATTGTTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYQADMS*LPLLGD
Trigger: ATCCCCCAACAATGGCAACCAAGACATGTCAGCCTG...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCGCTATGGATGGGACATaGACTGCATTTTACCTACTC +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSAMDGT*TAFYLL
Trigger: GAGTAGGTAAAATGCAGTCCATGTCCCATCCATAGC...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTGCTATGGATGGGACATaGACTGCATTTTACCTACTC +
Preference number: 4 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCAMDGT*TAFYLL
Trigger: GAGTAGGTAAAATGCAGTCCATGTCCCATCCATAGC...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAAGTAGATGGCTATGGATaGGACATGGACTGCATTTTA +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWEVDGYG*DMDCIL
Trigger: TAAAATGCAGTCCATGTCCCATCCATAGCCATCTAC...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAAATTGTAGTAGTTTTCTaGAGAGCCTGTGGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWEIVVVF*RACGQL
Trigger: TAACTGCCCACAGGCTCTCCAGAAAACTACTACAAT...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATAGGGTGTTCCTAGTATaGACTTTGGGTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYRVFLV*TLGFCF
Trigger: AAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGCTTCTGACTACTGACTaGTTATCTTCTGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRLLTTD*LSSGLG
Trigger: ACCCAGACCAGAAGATAATCAGTCAGTAGTCAGAAG...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR TCA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGATACTGCCCTTTGACTaGATGTTGCTACTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQILPFD*MLLLLA
Trigger: AGCAAGAAGTAGCAACATTCAGTCAAAGGGCAGTAT...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCTCAGATACTGCCCTTTaGCTGAATGTTGCTACTTCT +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSSDTAL*LNVATS
Trigger: AGAAGTAGCAACATTCAGTCAAAGGGCAGTATCTGA...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR TCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGATCAGATACTGCCCTTTaGCTGAATGTTGCTACTTCT +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGSDTAL*LNVATS
Trigger: AGAAGTAGCAACATTCAGTCAAAGGGCAGTATCTGA...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCCCAATACAGGCTTCATaGATTTGGGACATCATTCGA +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSPIQAS*IWDIIR
Trigger: TCGAATGATGTCCCAAATTCATGAAGCCTGTATTGG...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR TCA 90 bp TGGAAAAATAGCTTATGTTGGGCTTCTGGATGTGACCCATCTTTACCAACCATTACAAAATCATACGGATaGAAGCCAATACAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: WKNSLCWASGCDPSLPTITKSYG*KPIQAS
Trigger: TGAAGCCTGTATTGGCTTTCATCCGTATGATTTTGT...AATGGTTGGTAAAGATGGGTCACATCCAGAAGCCCAACATAAGCTATTTTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR TCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGATCAGAGTTAGAAAACTaGGGTGCTCCAAATTCTCTC +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGSELEN*GAPNSL
Trigger: GAGAGAATTTGGAGCACCTCAGTTTTCTAACTCTGA...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTTCAGAGTTAGAAAACTaGGGTGCTCCAAATTCTCTC +
Preference number: 4 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCSELEN*GAPNSL
Trigger: GAGAGAATTTGGAGCACCTCAGTTTTCTAACTCTGA...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATTTTCTTTGGACTCTGTaGAGGCACTGGCTGGTTATC +
Preference number: 4 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNFLWTL*RHWLVI
Trigger: GATAACCAGCCAGTGCCTTCACAGAGTCCAAAGAAA...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAAATGTCTCAAGGCCACTaGAGTGACATTATAACTTCA +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWEMSQGH*SDIITS
Trigger: TGAAGTTATAATGTCACTTCAGTGGCCTTGAGACAT...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAACTGTCTAAAGTTGGCTaGCAGGTGTTATATTCACAA +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWELSKVG*QVLYSQ
Trigger: TTGTGAATATAACACCTGTCAGCCAACTTTAGACAG...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATCTGTCTAAAGTTGGCTaGCAGGTGTTATATTCACAA +
Preference number: 4 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYLSKVG*QVLYSQ
Trigger: TTGTGAATATAACACCTGTCAGCCAACTTTAGACAG...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGAAGGAAATTGAGTGATTaGTGTGTGTGTACGGTAGCT +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGRKLSD*CVCTVA
Trigger: AGCTACCGTACACACACATCAATCACTCAATTTCCT...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTAGGAAATTGAGTGATTaGTGTGTGTGTACGGTAGCT +
Preference number: 4 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCRKLSD*CVCTVA
Trigger: AGCTACCGTACACACACATCAATCACTCAATTTCCT...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAACTGAGTCAATGTTTCTaGCCTTCAGATAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWELSQCF*PSDKVF
Trigger: AAAGACCTTATCTGAAGGTCAGAAACATTGACTCAG...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATAACGGATGGGTGGGATaGGACTTCAGCTTTATTGGA +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYNGWVG*DFSFIG
Trigger: TCCAATAAAGCTGAAGTCTCATCCCACCCATCCGTT...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR GCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGAAAGAACAAAGTGCCTTaGCAGTGGCATCCATCATTT +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGKNKVP*QWHPSF
Trigger: AAATGATGGATGCCACTGGCAAGGCACTTTGTTCTT...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGAAATGTTGCTACTTCTTaGTTCAGACGAGACAGAGGA +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGNVATS*FRRDRG
Trigger: TCCTCTGTCTCGTCTGAAGCAAGAAGTAGCAACATT...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCAATGTTGCTACTTCTTaGTTCAGACGAGACAGAGGA +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSNVATS*FRRDRG
Trigger: TCCTCTGTCTCGTCTGAAGCAAGAAGTAGCAACATT...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp AGATTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTAATTGTCAAAAGAAGCTTTaGTATTTCTCACTTGCATCT +
Preference number: 4 (lower is better)
Translates to: RLNQADMSWLPLLGDLVNCQKKL*YFSLAS
Trigger: AGATGCAAGTGAGAAATAGCAAAGCTTCTTTTGACA...ATTAACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR GCA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTAATTGTGATCTTTGTTTaGTTGTTCACTCTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLIVIFV*LFTLKA
Trigger: AGCTTTGAGAGTGAACAAGCAAACAAAGATCACAAT...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp CAGATTTTGCTTAGTAATCAAATAGAACCTCAGATCATGTCACCCACAGAAAGAAAGTGGATCCAAGTCTaGAAACAGATTGAACCAGGC +
Preference number: 4 (lower is better)
Translates to: QILLSNQIEPQIMSPTERKWIQV*KQIEPG
Trigger: GCCTGGTTCAATCTGTTTGCAGACTTGGATCCACTT...TCTTTCTGTGGGTGACATGATCTGAGGTTCTATTTGATTACTAAGCAAAATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATAATACTATTGCCAGTTaGTTAGGGAATATTCTCCCC +
Preference number: 4 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYNTIAS*LGNILP
Trigger: GGGGAGAATATTCCCTAAGCAACTGGCAATAGTATT...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTAATACTATTGCCAGTTaGTTAGGGAATATTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPNTIAS*LGNILP
Trigger: GGGGAGAATATTCCCTAAGCAACTGGCAATAGTATT...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATAGCTTTCTGTATGTCTaGCAGAAAGTATTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYSFLYV*QKVFWV
Trigger: AACCCAGAATACTTTCTGGCAGACATACAGAAAGCT...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp CAGATTTTGCTTAGTAATCAAATAGAACCTCAGATCATGTCACCCACAGAAAGAGATTATCTTCTGGTCTaGGTTGCCCAAAGGAATCCA +
Preference number: 4 (lower is better)
Translates to: QILLSNQIEPQIMSPTERDYLLV*VAQRNP
Trigger: TGGATTCCTTTGGGCAACCCAGACCAGAAGATAATC...TCTTTCTGTGGGTGACATGATCTGAGGTTCTATTTGATTACTAAGCAAAATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTAACATTGAGTCTTAGCTaGTATTTCTCGATTATCTTC +
Preference number: 4 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLTLSLS*YFSIIF
Trigger: GAAGATAATCGAGAAATACCAGCTAAGACTCAATGT...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CCA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATGGGCCAATCTTTGCTTaGCTGAAGAACAAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNGPIFA*LKNKVP
Trigger: AGGCACTTTGTTCTTCAGCCAAGCAAAGATTGGCCC...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp CATTATAACTTCAGTCAAGCATTAAGAAGTTCATCATCTGAGTGTCCAATAGCAGGGCCAATCTTTGCTTaGCTGAAGAACAAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: HYNFSQALRSSSSECPIAGPIFA*LKNKVP
Trigger: AGGCACTTTGTTCTTCAGCCAAGCAAAGATTGGCCC...TGCTATTGGACACTCAGATGATGAACTTCTTAATGCTTGACTGAAGTTATAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR CCA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTGCAGTCTGGCATTCTTaGGTAAATTCACTAGTACTT +
Preference number: 4 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPAVWHS*VNSLVL
Trigger: AAGTACTAGTGAATTTACCCAAGAATGCCAGACTGC...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGAGTAGATGGCTATGGATaGGACATGGACTGCATTTTA +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGVDGYG*DMDCIL
Trigger: TAAAATGCAGTCCATGTCCCATCCATAGCCATCTAC...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATAGTTACTATTGTAGATaGCTATGGATGGGACATGGA +
Preference number: 4 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYSYYCR*LWMGHG
Trigger: TCCATGTCCCATCCATAGCCATCTACAATAGTAACT...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGATTTCTGGAGAGCCTGTaGGCAGTTACTATTGTAGAT +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGFLESL*AVTIVD
Trigger: ATCTACAATAGTAACTGCCCACAGGCTCTCCAGAAA...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGATTGTAGTAGTTTTCTaGAGAGCCTGTGGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQIVVVF*RACGQL
Trigger: TAACTGCCCACAGGCTCTCCAGAAAACTACTACAAT...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCATTGTAGTAGTTTTCTaGAGAGCCTGTGGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSIVVVF*RACGQL
Trigger: TAACTGCCCACAGGCTCTCCAGAAAACTACTACAAT...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGAAGGGTGTTCCTAGTATaGACTTTGGGTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGRVFLV*TLGFCF
Trigger: AAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCAGGGTGTTCCTAGTATaGACTTTGGGTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSRVFLV*TLGFCF
Trigger: AAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTAGTGGTTGGACTTGTTaGAAGTTAGAACTGGACTTG +
Preference number: 4 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCSGWTC*KLELDL
Trigger: CAAGTCCAGTTCTAACTTCCAACAAGTCCAACCACT...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAAGCTCTTCAAAAACAGTaGTTGGACTTGTTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWEALQKQ*LDLLEV
Trigger: AACTTCCAACAAGTCCAACCACTGTTTTTGAAGAGC...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp TGGAAAAATAGCTTATGTTGGGCTTCTGGATGTGACCCATCTTTACCAACCATTGCCCTGCCAACACTATaGAAGACAAAAATAACTGAA +
Preference number: 4 (lower is better)
Translates to: WKNSLCWASGCDPSLPTIALPTL*KTKITE
Trigger: TTCAGTTATTTTTGTCTTCCATAGTGTTGGCAGGGC...AATGGTTGGTAAAGATGGGTCACATCCAGAAGCCCAACATAAGCTATTTTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
3UTR CAA 72 bp TTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTaGTTAAAGTATCTGTATTCGATAACAGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: FLVWTLGFCFVC*LKYLYSITGTS
Trigger: GGAAGTCCCTGTTATCGAATACAGATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATAGTCTGCAAACAGATTaGACCAGGCTGACATGTCTT +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYSLQTD*TRLTCL
Trigger: AAGACATGTCAGCCTGGTTCAATCTGTTTGCAGACT...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR TCA 90 bp CATTATAACTTCAGTCAAGCATTAAGAAGTTCATCATCTGAGTGTCCAATAGCAAGTCTGCAAACAGATTaGACCAGGCTGACATGTCTT +
Preference number: 4 (lower is better)
Translates to: HYNFSQALRSSSSECPIASLQTD*TRLTCL
Trigger: AAGACATGTCAGCCTGGTTCAATCTGTTTGCAGACT...TGCTATTGGACACTCAGATGATGAACTTCTTAATGCTTGACTGAAGTTATAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR TCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAAATGTCTCAAGGCCACTaGAGTGACATTATAACTTCA +
Preference number: 4 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKMSQGH*SDIITS
Trigger: TGAAGTTATAATGTCACTTCAGTGGCCTTGAGACAT...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCATGTCTCAAGGCCACTaGAGTGACATTATAACTTCA +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSMSQGH*SDIITS
Trigger: TGAAGTTATAATGTCACTTCAGTGGCCTTGAGACAT...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR TCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAAAATACGTTGCAAAATTaGTGTCTCAAGGCCACTGAA +
Preference number: 4 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKNTLQN*CLKATE
Trigger: TTCAGTGGCCTTGAGACATCAATTTTGCAACGTATT...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGATATTACTGTGCATTCTaGGTTTTAGGAGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGYYCAF*VLGDGK
Trigger: CTTCCCATCTCCTAAAACTCAGAATGCACAGTAATA...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp CAGATTTTGCTTAGTAATCAAATAGAACCTCAGATCATGTCACCCACAGAAAGAATGAAAAAGTGGGTCTaGAGACACTTGTACAAGCCT +
Preference number: 4 (lower is better)
Translates to: QILLSNQIEPQIMSPTERMKKWV*RHLYKP
Trigger: AGGCTTGTACAAGTGTCTTCAGACCCACTTTTTCAT...TCTTTCTGTGGGTGACATGATCTGAGGTTCTATTTGATTACTAAGCAAAATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGATGAAAAAGTGGGTCTaGAGACACTTGTACAAGCCT +
Preference number: 4 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRMKKWV*RHLYKP
Trigger: AGGCTTGTACAAGTGTCTTCAGACCCACTTTTTCAT...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR TCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATTATATAGCAAGTGTATaGAAAAGTGGGTCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYYIASV*KSGSED
Trigger: GTCTTCAGACCCACTTTTTCATACACTTGCTATATA...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAATATATAGCAAGTGTATaGAAAAGTGGGTCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWEYIASV*KSGSED
Trigger: GTCTTCAGACCCACTTTTTCATACACTTGCTATATA...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATGAGACACTCCCTTATTaGTCACACAGAGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYETLPY*SHRAFC
Trigger: ACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTC...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCCTGAGTCAATGTTTCTaGCCTTCAGATAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSLSQCF*PSDKVF
Trigger: AAAGACCTTATCTGAAGGTCAGAAACATTGACTCAG...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGACTGAGTCAATGTTTCTaGCCTTCAGATAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGLSQCF*PSDKVF
Trigger: AAAGACCTTATCTGAAGGTCAGAAACATTGACTCAG...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATATGGATTATCTAGATTaGGACAAAAAGCAACCAGTC +
Preference number: 4 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYMDYLD*DKKQPV
Trigger: GACTGGTTGCTTTTTGTCTCAATCTAGATAATCCAT...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAAGTTAATTTACACCACTaGGTGAAGAACCATGTTTTG +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWEVNLHH*VKNHVL
Trigger: CAAAACATGGTTCTTCACTCAGTGGTGTAAATTAAC...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATTTTGCCAGCTTGAGTTaGATCCCGTTCTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYFASLS*IPFCLK
Trigger: TTTCAAGCAGAACGGGATGCAACTCAAGCTGGCAAA...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATTATTCTGTGCGTGCCTaGTCCATCCGATTAATTGTC +
Preference number: 4 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNYSVRA*SIRLIV
Trigger: GACAATTAATCGGATGGAGCAGGCACGCACAGAATA...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGATTCACTCTCAAAGCTTaGTTCCTCATCAGACAAAAC +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGFTLKA*FLIRQN
Trigger: GTTTTGTCTGATGAGGAAGCAAGCTTTGAGAGTGAA...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAAGTTAGAAAACTGAGGTaGTCCAAATTCTCTCATTTG +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWEVRKLR*SKFSHL
Trigger: CAAATGAGAGAATTTGGAGCACCTCAGTTTTCTAAC...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATAAGTGGATCCAAGTCTaGAAACAGATTGAACCAGGC +
Preference number: 4 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNKWIQV*KQIEPG
Trigger: GCCTGGTTCAATCTGTTTGCAGACTTGGATCCACTT...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATCACCGTGCTTTTGTGTaGGGGTTACAATCTAAATCC +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYHRAFV*GLQSKS
Trigger: GGATTTAGATTGTAACCCGCACACAAAAGCACGGTG...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAAAATACTATTGCCAGTTaGTTAGGGAATATTCTCCCC +
Preference number: 4 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKNTIAS*LGNILP
Trigger: GGGGAGAATATTCCCTAAGCAACTGGCAATAGTATT...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTAGCTTTCTGTATGTCTaGCAGAAAGTATTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCSFLYV*QKVFWV
Trigger: AACCCAGAATACTTTCTGGCAGACATACAGAAAGCT...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAAAATCTGATCTTATTATaGCCTGGTATTCCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKNLILL*PGIPAS
Trigger: AGACGCAGGAATACCAGGGCATAATAAGATCAGATT...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTAATCTGATCTTATTATaGCCTGGTATTCCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCNLILL*PGIPAS
Trigger: AGACGCAGGAATACCAGGGCATAATAAGATCAGATT...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGAAGGCATCTGCCACCATaGCCAGCTAATTTTTATATT +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGRHLPP*PANFYI
Trigger: AATATAAAAATTAGCTGGGCATGGTGGCAGATGCCT...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATGATTATCTTCTGGTCTaGGTTGCCCAAAGGAATCCA +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYDYLLV*VAQRNP
Trigger: TGGATTCCTTTGGGCAACCCAGACCAGAAGATAATC...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CCA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTGCAGTCTGGCATTCTTaGGTAAATTCACTAGTACTT +
Preference number: 4 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCAVWHS*VNSLVL
Trigger: AAGTACTAGTGAATTTACCCAAGAATGCCAGACTGC...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCCTTGGTTGCCATTGTTaGGGGATCTTGTTAATTTCT +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSLGCHC*GILLIS
Trigger: AGAAATTAACAAGATCCCCCAACAATGGCAACCAAG...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CCA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTCTTGGTTGCCATTGTTaGGGGATCTTGTTAATTTCT +
Preference number: 4 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCLGCHC*GILLIS
Trigger: AGAAATTAACAAGATCCCCCAACAATGGCAACCAAG...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAAAACCCAAAACAAAGCTaGTCTGGTTCTAATGGTGTT +
Preference number: 4 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKNPKQS*SGSNGV
Trigger: AACACCATTAGAACCAGACCAGCTTTGTTTTGGGTT...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGAAACCCAAAACAAAGCTaGTCTGGTTCTAATGGTGTT +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGNPKQS*SGSNGV
Trigger: AACACCATTAGAACCAGACCAGCTTTGTTTTGGGTT...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCAACCCAAAACAAAGCTaGTCTGGTTCTAATGGTGTT +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSNPKQS*SGSNGV
Trigger: AACACCATTAGAACCAGACCAGCTTTGTTTTGGGTT...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCAGTTACTATTGTAGATaGCTATGGATGGGACATGGA +
Preference number: 4 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFSYYCR*LWMGHG
Trigger: TCCATGTCCCATCCATAGCCATCTACAATAGTAACT...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAAAGTTACTATTGTAGATaGCTATGGATGGGACATGGA +
Preference number: 4 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKSYYCR*LWMGHG
Trigger: TCCATGTCCCATCCATAGCCATCTACAATAGTAACT...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp CAGATTTTGCTTAGTAATCAAATAGAACCTCAGATCATGTCACCCACAGAAAGAAGTGGTTGGACTTGTTaGAAGTTAGAACTGGACTTG +
Preference number: 4 (lower is better)
Translates to: QILLSNQIEPQIMSPTERSGWTC*KLELDL
Trigger: CAAGTCCAGTTCTAACTTCCAACAAGTCCAACCACT...TCTTTCTGTGGGTGACATGATCTGAGGTTCTATTTGATTACTAAGCAAAATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTGCTCTTCAAAAACAGTaGTTGGACTTGTTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCALQKQ*LDLLEV
Trigger: AACTTCCAACAAGTCCAACCACTGTTTTTGAAGAGC...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAAGCTCTTCAAAAACAGTaGTTGGACTTGTTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKALQKQ*LDLLEV
Trigger: AACTTCCAACAAGTCCAACCACTGTTTTTGAAGAGC...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCAAAAATAGCTTATGTTaGGCTTCTGGATGTGACCCA +
Preference number: 4 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFKNSLC*ASGCDP
Trigger: TGGGTCACATCCAGAAGCCCAACATAAGCTATTTTT...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATCTGATAACGGATGGGTaGGATGAGACTTCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYLITDG*DETSAL
Trigger: TAAAGCTGAAGTCTCATCCCACCCATCCGTTATCAG...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438804.5
3UTR CAA 72 bp ACTTATTCAAATGTGGTCTTTACCATCTGTCTAAAGTaGGCTGACAGGTGTTATATTCACAAACACCGTGCT +
Preference number: 4 (lower is better)
Translates to: TYSNVVFTICLK*ADRCYIHKHRA
Trigger: AGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTTTAGACAGATGGTAAAGACCACATTTGAATAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
3UTR CAA 72 bp GGTATAGAATTCAGATTGGGATTCGTAATCATGATCTaGGTGATTGGAACTTGGCAGAACAGTGACAGTATT +
Preference number: 4 (lower is better)
Translates to: GIEFRLGFVIMI*VIGTWQNSDSI
Trigger: AATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATTCAGATACTGCCCTTTaGCTGAATGTTGCTACTTCT +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYSDTAL*LNVATS
Trigger: AGAAGTAGCAACATTCAGTCAAAGGGCAGTATCTGA...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR TCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATCCAATACAGGCTTCATaGATTTGGGACATCATTCGA +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYPIQAS*IWDIIR
Trigger: TCGAATGATGTCCCAAATTCATGAAGCCTGTATTGG...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR TCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATTCAGAGTTAGAAAACTaGGGTGCTCCAAATTCTCTC +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYSELEN*GAPNSL
Trigger: GAGAGAATTTGGAGCACCTCAGTTTTCTAACTCTGA...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR TCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGAAAAAGGACAGGAAATTaGGTGATTGATGTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGKRTGN*VIDVCV
Trigger: TACACACACATCAATCACTCAATTTCCTGTCCTTTT...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATAACTTGGCAGAACAGTaGCAGTATTACATTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYNLAEQ*QYYILG
Trigger: TCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTT...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAAAATGCATTAGCAAGGTaGCCACTACAAAGAAAAATG +
Preference number: 4 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKNALAR*PLQRKM
Trigger: CATTTTTCTTTGTAGTGGTCACCTTGCTAATGCATT...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATAAGAACAAAGTGCCTTaGCAGTGGCATCCATCATTT +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYKNKVP*QWHPSF
Trigger: AAATGATGGATGCCACTGGCAAGGCACTTTGTTCTT...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATTGTCAAAAGAAGCTTTaGTATTTCTCACTTGCATCT +
Preference number: 4 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYCQKKL*YFSLAS
Trigger: AGATGCAAGTGAGAAATAGCAAAGCTTCTTTTGACA...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGGTTAGAAAACTGAGGTaGTCCAAATTCTCTCATTTG +
Preference number: 4 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQVRKLR*SKFSHL
Trigger: CAAATGAGAGAATTTGGAGCACCTCAGTTTTCTAAC...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCGTTAGAAAACTGAGGTaGTCCAAATTCTCTCATTTG +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSVRKLR*SKFSHL
Trigger: CAAATGAGAGAATTTGGAGCACCTCAGTTTTCTAAC...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCACGAAGGAAATACGTTaGAAAATTGATGTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFTKEIR*KIDVSR
Trigger: CCTTGAGACATCAATTTTGCAACGTATTTCCTTCGT...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATTATTCACAAACACCGTaGTTTTGTGTGCGGGTTACA +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYYSQTP*FCVRVT
Trigger: TGTAACCCGCACACAAAAGCACGGTGTTTGTGAATA...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp TGGAAAAATAGCTTATGTTGGGCTTCTGGATGTGACCCATCTTTACCAACCATTTTTCAGGAATACTATTaGCAGTTGCTTAGGGAATAT +
Preference number: 4 (lower is better)
Translates to: WKNSLCWASGCDPSLPTIFQEYY*QLLREY
Trigger: ATATTCCCTAAGCAACTGGCAATAGTATTCCTGAAA...AATGGTTGGTAAAGATGGGTCACATCCAGAAGCCCAACATAAGCTATTTTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAAACACACTTGGGAAATTaGTTCAAAATTAAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKTHLGN*FKIKGW
Trigger: CCACCCTTTAATTTTGAAGCAATTTCCCAAGTGTGT...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGACACACTTGGGAAATTaGTTCAAAATTAAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQTHLGN*FKIKGW
Trigger: CCACCCTTTAATTTTGAAGCAATTTCCCAAGTGTGT...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTACACACTTGGGAAATTaGTTCAAAATTAAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCTHLGN*FKIKGW
Trigger: CCACCCTTTAATTTTGAAGCAATTTCCCAAGTGTGT...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCGTCTTCTTATGGAAATaGAATGGACTGGATGACAAA +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSVFLWK*NGLDDK
Trigger: TTTGTCATCCAGTCCATTGCATTTCCATAAGAAGAC...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATTGTAAAAACATACACTaGAAAATCTCACCCACAACA +
Preference number: 4 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYCKNIH*KISPTT
Trigger: TGTTGTGGGTGAGATTTTGCAGTGTATGTTTTTACA...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAAACATTGAGTCTTAGCTaGTATTTCTCGATTATCTTC +
Preference number: 4 (lower is better)
Translates to: MILVIGTWQNSDSITFWETLSLS*YFSIIF
Trigger: GAAGATAATCGAGAAATACCAGCTAAGACTCAATGT...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp TGGAAAAATAGCTTATGTTGGGCTTCTGGATGTGACCCATCTTTACCAACCATTACATTGAGTCTTAGCTaGTATTTCTCGATTATCTTC +
Preference number: 4 (lower is better)
Translates to: WKNSLCWASGCDPSLPTITLSLS*YFSIIF
Trigger: GAAGATAATCGAGAAATACCAGCTAAGACTCAATGT...AATGGTTGGTAAAGATGGGTCACATCCAGAAGCCCAACATAAGCTATTTTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp TGGAAAAATAGCTTATGTTGGGCTTCTGGATGTGACCCATCTTTACCAACCATTCTGAGTTTTAGGAGATaGGAAGATAGATTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: WKNSLCWASGCDPSLPTILSFRR*EDRFFC
Trigger: ACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAG...AATGGTTGGTAAAGATGGGTCACATCCAGAAGCCCAACATAAGCTATTTTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATAGTGGTTGGACTTGTTaGAAGTTAGAACTGGACTTG +
Preference number: 4 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNSGWTC*KLELDL
Trigger: CAAGTCCAGTTCTAACTTCCAACAAGTCCAACCACT...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
3UTR CAA 72 bp TTGTTAAAGTATCTGTATTCGATAACAGGGACTTCCTaGCACACATGTGAGGGAGATAAATATCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: LLKYLYSITGTS*HTCEGDKYLRT
Trigger: AGTTCTGAGATATTTATCTCCCTCACATGTGTGCAAGGAAGTCCCTGTTATCGAATACAGATACTTTAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATATGTCTCAAGGCCACTaGAGTGACATTATAACTTCA +
Preference number: 4 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNMSQGH*SDIITS
Trigger: TGAAGTTATAATGTCACTTCAGTGGCCTTGAGACAT...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp CATTATAACTTCAGTCAAGCATTAAGAAGTTCATCATCTGAGTGTCCAATAGCAAATACGTTGCAAAATTaGTGTCTCAAGGCCACTGAA +
Preference number: 4 (lower is better)
Translates to: HYNFSQALRSSSSECPIANTLQN*CLKATE
Trigger: TTCAGTGGCCTTGAGACATCAATTTTGCAACGTATT...TGCTATTGGACACTCAGATGATGAACTTCTTAATGCTTGACTGAAGTTATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR TCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATCTGTCTAAAGTTGGCTaGCAGGTGTTATATTCACAA +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYLSKVG*QVLYSQ
Trigger: TTGTGAATATAACACCTGTCAGCCAACTTTAGACAG...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR TCA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATTATTACTGTGCATTCTaGGTTTTAGGAGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNYYCAF*VLGDGK
Trigger: CTTCCCATCTCCTAAAACTCAGAATGCACAGTAATA...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp CAGATTTTGCTTAGTAATCAAATAGAACCTCAGATCATGTCACCCACAGAAAGATTACTCTTTGGCCAATaGGTAGTTAATTTACACCAC +
Preference number: 4 (lower is better)
Translates to: QILLSNQIEPQIMSPTERLLFGQ*VVNLHH
Trigger: GTGGTGTAAATTAACTACTCATTGGCCAAAGAGTAA...TCTTTCTGTGGGTGACATGATCTGAGGTTCTATTTGATTACTAAGCAAAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATCTAAACTTTTCCATTTaGTTTAAGGTGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYLNFSI*FKVSGS
Trigger: GGACCCAGACACCTTAAAGCAAATGGAAAAGTTTAG...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR GCA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATCTAAACTTTTCCATTTaGTTTAAGGTGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNLNFSI*FKVSGS
Trigger: GGACCCAGACACCTTAAAGCAAATGGAAAAGTTTAG...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGAATTGTGATCTTTGTTTaGTTGTTCACTCTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGIVIFV*LFTLKA
Trigger: AGCTTTGAGAGTGAACAAGCAAACAAAGATCACAAT...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAAATTGTGATCTTTGTTTaGTTGTTCACTCTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKIVIFV*LFTLKA
Trigger: AGCTTTGAGAGTGAACAAGCAAACAAAGATCACAAT...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCTTTCAGGAATACTATTaGCAGTTGCTTAGGGAATAT +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSFQEYY*QLLREY
Trigger: ATATTCCCTAAGCAACTGGCAATAGTATTCCTGAAA...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGGTCTTCTTATGGAAATaGAATGGACTGGATGACAAA +
Preference number: 4 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRVFLWK*NGLDDK
Trigger: TTTGTCATCCAGTCCATTGCATTTCCATAAGAAGAC...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATAATCTGATCTTATTATaGCCTGGTATTCCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYNLILL*PGIPAS
Trigger: AGACGCAGGAATACCAGGGCATAATAAGATCAGATT...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATTGAGTCTTAGCTaGTATTTCTCGATTATCTTC +
Preference number: 4 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSTLSLS*YFSIIF
Trigger: GAAGATAATCGAGAAATACCAGCTAAGACTCAATGT...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATGCAGTCTGGCATTCTTaGGTAAATTCACTAGTACTT +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYAVWHS*VNSLVL
Trigger: AAGTACTAGTGAATTTACCCAAGAATGCCAGACTGC...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CCA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCCTGAGTTTTAGGAGATaGGAAGATAGATTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFLSFRR*EDRFFC
Trigger: ACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAG...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGATTCAAAAACAGTGGTTaGACTTGTTGGAAGTTAGAA +
Preference number: 4 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGFKNSG*TCWKLE
Trigger: TTCTAACTTCCAACAAGTCCAACCACTGTTTTTGAA...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATGCCCTGCCAACACTATaGAAGACAAAAATAACTGAA +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYALPTL*KTKITE
Trigger: TTCAGTTATTTTTGTCTTCCATAGTGTTGGCAGGGC...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATAAAAATAGCTTATGTTaGGCTTCTGGATGTGACCCA +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYKNSLC*ASGCDP
Trigger: TGGGTCACATCCAGAAGCCCAACATAAGCTATTTTT...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR TCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATTATATAGCAAGTGTATaGAAAAGTGGGTCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYYIASV*KSGSED
Trigger: GTCTTCAGACCCACTTTTTCATACACTTGCTATATA...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATAAAAGGACAGGAAATTaGGTGATTGATGTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYKRTGN*VIDVCV
Trigger: TACACACACATCAATCACTCAATTTCCTGTCCTTTT...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATAATGCATTAGCAAGGTaGCCACTACAAAGAAAAATG +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYNALAR*PLQRKM
Trigger: CATTTTTCTTTGTAGTGGTCACCTTGCTAATGCATT...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATATGGATTATCTAGATTaGGACAAAAAGCAACCAGTC +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYMDYLD*DKKQPV
Trigger: GACTGGTTGCTTTTTGTCTCAATCTAGATAATCCAT...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR TCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATGTTAATTTACACCACTaGGTGAAGAACCATGTTTTG +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYVNLHH*VKNHVL
Trigger: CAAAACATGGTTCTTCACTCAGTGGTGTAAATTAAC...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR TCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATTTACTCTTTGGCCAATaGGTAGTTAATTTACACCAC +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYLLFGQ*VVNLHH
Trigger: GTGGTGTAAATTAACTACTCATTGGCCAAAGAGTAA...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGTGTCAAAAGAAGCTTTaGTATTTCTCACTTGCATCT +
Preference number: 4 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRCQKKL*YFSLAS
Trigger: AGATGCAAGTGAGAAATAGCAAAGCTTCTTTTGACA...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR GCA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATGTTAGAAAACTGAGGTaGTCCAAATTCTCTCATTTG +
Preference number: 4 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNVRKLR*SKFSHL
Trigger: CAAATGAGAGAATTTGGAGCACCTCAGTTTTCTAAC...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR GCA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATACGAAGGAAATACGTTaGAAAATTGATGTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYTKEIR*KIDVSR
Trigger: CCTTGAGACATCAATTTTGCAACGTATTTCCTTCGT...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
3UTR CAA 72 bp AAACCACAACCCAATTTACATGCTATCTATCTATCTTaGTTATCCACATATAAAATTCTCACAGCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: KPQPNLHAIYLS*LSTYKILTASK
Trigger: CTTGCTGGCTGTGAGAATTTTATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CCA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATTTCAAAAACAGTGGTTaGACTTGTTGGAAGTTAGAA +
Preference number: 4 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNFKNSG*TCWKLE
Trigger: TTCTAACTTCCAACAAGTCCAACCACTGTTTTTGAA...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS TCA 90 bp ACGGCGCCGCTCTTCCGCCTCCTCGGGTCGCGTTCGGCCGTACGGTaGTCCGTCCCGGCACCCGTTCCGGCCACCGCCCGCGAGCCCCGC +
Preference number: 5 (lower is better)
Translates to: TAPLFRLLGSRSAVR*SVPAPVPATAREPR
Trigger: GCGGGGCTCGCGGGCGGTGGCCGGAACGGGTGCCGGGACGGATCACCGTACGGCCGAACGCGACCCGAGGAGGCGGAAGAGCGGCGCCGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000419460.5
CDS CCA 90 bp CCCAAACGAGCCCCAGGCTGCCGCGCTCCTTCACTACAGCGAGCGTaGCCGGGAGGCGCCCTTCCGCCGCAGGGGACCCAGCCACGCCAG +
Preference number: 5 (lower is better)
Translates to: PKRAPGCRAPSLQRA*PGGALPPQGTQPRQ
Trigger: CTGGCGTGGCTGGGTCCCCTGCGGCGGAAGGGCGCCTCCCGGCCACGCTCGCTGTAGTGAAGGAGCGCGGCAGCCTGGGGCTCGTTTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421334.1
ENST00000438804.5
ENST00000457524.5
ENST00000484561.5
ENST00000617388.4
CDS GCA 90 bp AGCGACCTCCACCGCCGAGGGAAATCACCCAAACGAGCCCCAGGCTaGCGCGCTCCTTCACTACAGCGAGCGTGGCCGGGAGGCGCCCTT +
Preference number: 5 (lower is better)
Translates to: SDLHRRGKSPKRAPG*RAPSLQRAWPGGAL
Trigger: AAGGGCGCCTCCCGGCCACGCTCGCTGTAGTGAAGGAGCGCGGCAGCCTGGGGCTCGTTTGGGTGATTTCCCTCGGCGGTGGAGGTCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421334.1
ENST00000438804.5
ENST00000457524.5
ENST00000484561.5
ENST00000617388.4
CDS GCA 90 bp CTGACGCGCGTTTCCAGGAGCCATATCTGTGCCGTGGGGTCGGGTTaGCGGCCTAAGGAGCAGGATCTGTGCGCGGAGCCCCTCGCGGGC +
Preference number: 5 (lower is better)
Translates to: LTRVSRSHICAVGSG*RPKEQDLCAEPLAG
Trigger: GCCCGCGAGGGGCTCCGCGCACAGATCCTGCTCCTTAGGCCGGCAACCCGACCCCACGGCACAGATATGGCTCCTGGAAACGCGCGTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411681.5
ENST00000421334.1
ENST00000450143.5
CDS GCA 90 bp ATCTGTGCCGTGGGGTCGGGTTGCCGGCCTAAGGAGCAGGATCTGTaGGCGGAGCCCCTCGCGGGCCCGTGCATTCTGCAGTTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: ICAVGSGCRPKEQDL*AEPLAGPCILQFSS
Trigger: TGAGCTGAACTGCAGAATGCACGGGCCCGCGAGGGGCTCCGCGCACAGATCCTGCTCCTTAGGCCGGCAACCCGACCCCACGGCACAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421334.1
CDS-3UTR CAA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTTCTTGGGAGACCCAGTaGTTGAACGCTCCAGCCACA +
Preference number: 5 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFSWETQ*LNAPAT
Trigger: TGTGGCTGGAGCGTTCAACAACTGGGTCTCCCAAGA...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGTCTGGGTCCAGCTCTaGGGATACATCTTTCATCCA +
Preference number: 5 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFVWVQL*GYIFHP
Trigger: TGGATGAAAGATGTATCCCAAGAGCTGGACCCAGAC...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS GCA 90 bp CGGCCTAAGGAGCAGGATCTGTGCGCGGAGCCCCTCGCGGGCCCGTaGATTCTGCAGTTCAGCTCAAACTGCACATTTACTATGTTTTGT +
Preference number: 5 (lower is better)
Translates to: RPKEQDLCAEPLAGP*ILQFSSNCTFTMFC
Trigger: ACAAAACATAGTAAATGTGCAGTTTGAGCTGAACTGCAGAATGCACGGGCCCGCGAGGGGCTCCGCGCACAGATCCTGCTCCTTAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421334.1
CDS-3UTR CAA 90 bp GGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGGGTCAGGGAGAAGCAACAAACACCGTGCTTTaGTGTGCGGGTTACAATCTA +
Preference number: 5 (lower is better)
Translates to: GERRGLRHGQEPLGQGEATNTVL*CAGYNL
Trigger: TAGATTGTAACCCGCACACAAAAGCACGGTGTTTGT...TGCTTCTCCCTGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTATCAGATACTGCCCTTaGACTGAATGTTGCTACTTC +
Preference number: 5 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFIRYCP*TECCYF
Trigger: GAAGTAGCAACATTCAGTCAAAGGGCAGTATCTGAT...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGTTCACTCTCAAAGCTaGCTTCCTCATCAGACAAAA +
Preference number: 5 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFVHSQS*LPHQTK
Trigger: TTTTGTCTGATGAGGAAGCAAGCTTTGAGAGTGAAC...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCGTGATCTTTGTTTGCTaGTTCACTCTCAAAGCTTGC +
Preference number: 5 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGVIFVC*FTLKAC
Trigger: GCAAGCTTTGAGAGTGAACAAGCAAACAAAGATCAC...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCCCAGAACTTAGGAGGTaGTTCAGAAATGAGAATTCC +
Preference number: 5 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGPELRR*FRNENS
Trigger: GGAATTCTCATTTCTGAACAACCTCCTAAGTTCTGG...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCCAGCCTATACTGTACTaGGCCATTGTAGTAGTTTTC +
Preference number: 5 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGQPILY*AIVVVF
Trigger: GAAAACTACTACAATGGCCAAGTACAGTATAGGCTG...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp GGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGGGTCAGGGAGAAGCAAAACAGTGGTTGGACTaGTTGGAAGTTAGAACTGGA +
Preference number: 5 (lower is better)
Translates to: GERRGLRHGQEPLGQGEAKQWLD*LEVRTG
Trigger: TCCAGTTCTAACTTCCAACAAGTCCAACCACTGTTT...TGCTTCTCCCTGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp GGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGGGTCAGGGAGAAGCAGTGTCTTGTAGTTGCTaGAGAGCTACAAAATCATAC +
Preference number: 5 (lower is better)
Translates to: GERRGLRHGQEPLGQGEAVSCSC*RATKSY
Trigger: GTATGATTTTGTAGCTCTCAAGCAACTACAAGACAC...TGCTTCTCCCTGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGGTATAGAATTCAGATaGGGATTCGTAATCATGATC +
Preference number: 5 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFGIEFR*GFVIMI
Trigger: GATCATGATTACGAATCCCAATCTGAATTCTATACC...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp GGTCCTAGAGAGACCAGTCACTGCATGCTGAGAGGGGGTCACATGGGAGGGGGCTTCTGCTTTGTCTGCTaGTTAAAGTATCTGTATTCG +
Preference number: 5 (lower is better)
Translates to: GPRETSHCMLRGGHMGGGFCFVC*LKYLYS
Trigger: CGAATACAGATACTTTAACAAGCAGACAAAGCAGAA...GCCCCCTCCCATGTGACCCCCTCTCAGCATGCAGTGACTGGTCTCTCTAGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp GCTCAGCCAAGCAGGTGGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTTTCTGCTTTGTCTGCTaGTTAAAGTATCTGTATTCG +
Preference number: 5 (lower is better)
Translates to: AQPSRWGAERPKTWAGAFFCFVC*LKYLYS
Trigger: CGAATACAGATACTTTAACAAGCAGACAAAGCAGAA...AAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCCACCTGCTTGGCTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp GGGGAGCGGAGAGGCCTAAGACATGGGCAGGAGCCTTTGGGTCAGGGAGAAGCAATTTCGGGAGAACTTTaGCTTTTGGAAAATTTAGGG +
Preference number: 5 (lower is better)
Translates to: GERRGLRHGQEPLGQGEAISGEL*LLENLG
Trigger: CCCTAAATTTTCCAAAAGCAAAAGTTCTCCCGAAAT...TGCTTCTCCCTGACCCAAAGGCTCCTGCCCATGTCTTAGGCCTCTCCGCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS TCA 90 bp GTTGTTGAACGCTCCAGCCACATGAAAGCCAAGGTCAAAGAGTTGTaGAGGAAGGAATCGAGAAGAATGAGCGAGGGGCTCAGACCCCAT +
Preference number: 5 (lower is better)
Translates to: VVERSSHMKAKVKEL*RKESRRMSEGLRPH
Trigger: ATGGGGTCTGAGCCCCTCGCTCATTCTTCTCGATTCCTTCCTTCACAACTCTTTGACCTTGGCTTTCATGTGGCTGGAGCGTTCAACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS TCA 90 bp ATTGTTGAACGCTCCAGCCACATGAAAGCCAAGGTCAAAGAGTTGTaGAGGAAGGAATCGAGAAGAATGAGCGAGGGGCTCAGACCCCAT +
Preference number: 5 (lower is better)
Translates to: IVERSSHMKAKVKEL*RKESRRMSEGLRPH
Trigger: ATGGGGTCTGAGCCCCTCGCTCATTCTTCTCGATTCCTTCCTTCACAACTCTTTGACCTTGGCTTTCATGTGGCTGGAGCGTTCAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS GCA 90 bp GAGTACACAGGGCCAATCTTTGCTTGGCTGAAGAACAAAGTGCCTTaGCAGTGGCATCCATCATTTTGCCAGCTTGAGTTGCATCCCGTT +
Preference number: 5 (lower is better)
Translates to: EYTGPIFAWLKNKVP*QWHPSFCQLELHPV
Trigger: AACGGGATGCAACTCAAGCTGGCAAAATGATGGATGCCACTGGCAAGGCACTTTGTTCTTCAGCCAAGCAAAGATTGGCCCTGTGTACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000425178.5
ENST00000435143.5
ENST00000438804.5
ENST00000450143.5
ENST00000476602.1
ENST00000617388.4
CDS CCA 90 bp ACAGGGCCAATCTTTGCTTGGCTGAAGAACAAAGTGCCTTGCCAGTaGCATCCATCATTTTGCCAGCTTGAGTTGCATCCCGTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: TGPIFAWLKNKVPCQ*HPSFCQLELHPVLL
Trigger: AAGCAGAACGGGATGCAACTCAAGCTGGCAAAATGATGGATGCCACTGGCAAGGCACTTTGTTCTTCAGCCAAGCAAAGATTGGCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000419460.5
ENST00000425178.5
ENST00000435143.5
ENST00000438804.5
ENST00000450143.5
ENST00000476602.1
ENST00000617388.4
CDS CCA 90 bp GATGTGAGACTGGCACTGGGGCTCCCAAAGGCAGTCTGGCATTCTTaGGTAAATTCACTAGTACTTGAAGAACCAGAACTTAGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: DVRLALGLPKAVWHS*VNSLVLEEPELRRL
Trigger: CAACCTCCTAAGTTCTGGTTCTTCAAGTACTAGTGAATTTACCCAAGAATGCCAGACTGCCTTTGGGAGCCCCAGTGCCAGTCTCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CAA 90 bp CCAGCTCTTGGGATACATCTTTCATCCACAGTAGAGCTCCTCTGTATTCTGTGCATCTTCTGGTCTGGGTaGCCCAAAGGAATCCATGGA +
Preference number: 5 (lower is better)
Translates to: PALGIHLSSTVELLCILCIFWSG*PKGIHG
Trigger: TCCATGGATTCCTTTGGGCAACCCAGACCAGAAGAT...GCACAGAATACAGAGGAGCTCTACTGTGGATGAAAGATGTATCCCAAGAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418208.5
CDS-3UTR CAA 90 bp ACATCTTTCATCCACAGTAGAGCTCCTCTGTATTCTGTGCGTGCCTGCTCCATCGAATGTTGCTACTTCTaGCTTCAGACGAGACAGAGG +
Preference number: 5 (lower is better)
Translates to: TSFIHSRAPLYSVRACSIECCYF*LQTRQR
Trigger: CCTCTGTCTCGTCTGAAGCAAGAAGTAGCAACATTC...GATGGAGCAGGCACGCACAGAATACAGAGGAGCTCTACTGTGGATGAAAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418208.5
CDS-3UTR CAA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTATCTTGGGAGACCCAGTaGTTGAACGCTCCAGCCACA +
Preference number: 5 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLSWETQ*LNAPAT
Trigger: TGTGGCTGGAGCGTTCAACAACTGGGTCTCCCAAGA...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS CCA 90 bp CTTTCCATAGGTCTAGGGAATCTGGCTTCTTATCAGCACTCCAGATaGTTTCGACACAGTGAATCCATGGACCTCGCTTTGAGAAGGACT +
Preference number: 5 (lower is better)
Translates to: LSIGLGNLASYQHSR*FRHSESMDLALRRT
Trigger: AGTCCTTCTCAAAGCGAGGTCCATGGATTCACTGTGTCGAAACCATCTGGAGTGCTGATAAGAAGCCAGATTCCCTAGACCTATGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476602.1
CDS-3UTR CAA 90 bp AACAGATTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTCATCATTTTGCCAGCTaGAGTTGCATCCCGTTCTGC +
Preference number: 5 (lower is better)
Translates to: NRLNQADMSWLPLLGDLVHHFAS*SCIPFC
Trigger: GCAGAACGGGATGCAACTCAAGCTGGCAAAATGATG...AACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAATCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR CAA 90 bp AGCTCTTGGGATACATCTTTCATCCACAGTAGAGCTCCTCTGTATTCTGTGCGTGTCTGGGTCCAGCTCTaGGGATACATCTTTCATCCA +
Preference number: 5 (lower is better)
Translates to: SSWDTSFIHSRAPLYSVRVWVQL*GYIFHP
Trigger: TGGATGAAAGATGTATCCCAAGAGCTGGACCCAGAC...ACGCACAGAATACAGAGGAGCTCTACTGTGGATGAAAGATGTATCCCAAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418208.5
CDS-3UTR CAA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGACATGGGCAGGAGCCTTaGGGTCAGGGAGAAGCACAC +
Preference number: 5 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGHGQEP*GQGEAH
Trigger: GTGTGCTTCTCCCTGACCCAAAGGCTCCTGCCCATG...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATTCTTGGGAGACCCAGTaGTTGAACGCTCCAGCCACA +
Preference number: 5 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYSWETQ*LNAPAT
Trigger: TGTGGCTGGAGCGTTCAACAACTGGGTCTCCCAAGA...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCGGTAGCAAGGGAAACTaGTGGCAGGGGCCACCCATA +
Preference number: 5 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSGSKGN*WQGPPI
Trigger: TATGGGTGGCCCCTGCCACAAGTTTCCCTTGCTACC...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp CAGATTTTGCTTAGTAATCAAATAGAACCTCAGATCATGTCACCCACAGAAAGACATGGGCAGGAGCCTTaGGGTCAGGGAGAAGCACAC +
Preference number: 5 (lower is better)
Translates to: QILLSNQIEPQIMSPTERHGQEP*GQGEAH
Trigger: GTGTGCTTCTCCCTGACCCAAAGGCTCCTGCCCATG...TCTTTCTGTGGGTGACATGATCTGAGGTTCTATTTGATTACTAAGCAAAATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTTGGGAGACCCAGTCCTaGGACTCAGTGATCCCATTC +
Preference number: 5 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPWETQS*DSVIPF
Trigger: GAATGGGATCACTGAGTCCAAGGACTGGGTCTCCCA...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS GCA 90 bp ACATCTTTCATCCACAGTAGAGCTCCTCTGTATTCTGTGCGTGCCTaGTCCATCCGATTAATTGTCATCAAGGTATCAGATACTGCCCTT +
Preference number: 5 (lower is better)
Translates to: TSFIHSRAPLYSVRA*SIRLIVIKVSDTAL
Trigger: AAGGGCAGTATCTGATACCTTGATGACAATTAATCGGATGGAGCAGGCACGCACAGAATACAGAGGAGCTCTACTGTGGATGAAAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000418208.5
ENST00000425178.5
ENST00000438804.5
ENST00000476602.1
ENST00000494560.1
ENST00000617388.4
CDS-3UTR CAA 90 bp TGCCAGCTTGAGTTGCATCCCGTTCTGCTTGAAATTTTAAAAAGAGCCCTAGCTTTTTGCCAGCTTGAGTaGCATCCCGTTCTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: CQLELHPVLLEILKRALAFCQLE*HPVLLE
Trigger: TTCAAGCAGAACGGGATGCAACTCAAGCTGGCAAAA...AGCTAGGGCTCTTTTTAAAATTTCAAGCAGAACGGGATGCAACTCAAGCTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000437978.5
CDS-3UTR CAA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTAGAATGTTGCTACTTCTaGCTTCAGACGAGACAGAGG +
Preference number: 5 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLECCYF*LQTRQR
Trigger: CCTCTGTCTCGTCTGAAGCAAGAAGTAGCAACATTC...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CAA 90 bp AGTAGAGCTCCTCTGTATTCTGTGCGTGCCTGCTCCATCCGATTAATTGTCATCATCAGATACTGCCCTTaGACTGAATGTTGCTACTTC +
Preference number: 5 (lower is better)
Translates to: SRAPLYSVRACSIRLIVIIRYCP*TECCYF
Trigger: GAAGTAGCAACATTCAGTCAAAGGGCAGTATCTGAT...GATGACAATTAATCGGATGGAGCAGGCACGCACAGAATACAGAGGAGCTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418208.5
CDS-3UTR CAA 90 bp AACAGATTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTACAGGCTTCATGAATTaGGGACATCATTCGAGCTGT +
Preference number: 5 (lower is better)
Translates to: NRLNQADMSWLPLLGDLVTGFMN*GHHSSC
Trigger: ACAGCTCGAATGATGTCCCAAATTCATGAAGCCTGT...AACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAATCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR CAA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATCATCATTTTGCCAGCTaGAGTTGCATCCCGTTCTGC +
Preference number: 5 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYHHFAS*SCIPFC
Trigger: GCAGAACGGGATGCAACTCAAGCTGGCAAAATGATG...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp AACAGATTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTATCAGATACTGCCCTTaGACTGAATGTTGCTACTTC +
Preference number: 5 (lower is better)
Translates to: NRLNQADMSWLPLLGDLVIRYCP*TECCYF
Trigger: GAAGTAGCAACATTCAGTCAAAGGGCAGTATCTGAT...AACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAATCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR CAA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATGTCTGGGTCCAGCTCTaGGGATACATCTTTCATCCA +
Preference number: 5 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYVWVQL*GYIFHP
Trigger: TGGATGAAAGATGTATCCCAAGAGCTGGACCCAGAC...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp AACAGATTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTTTGTCTTCACTAATCTaGCTTGGCGTGTCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: NRLNQADMSWLPLLGDLVLSSLI*LGVSCS
Trigger: ACTACAAGACACGCCAAGCAAGATTAGTGAAGACAA...AACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAATCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR CAA 90 bp AACAGATTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTCCAGAACTTAGGAGGTaGTTCAGAAATGAGAATTCC +
Preference number: 5 (lower is better)
Translates to: NRLNQADMSWLPLLGDLVPELRR*FRNENS
Trigger: GGAATTCTCATTTCTGAACAACCTCCTAAGTTCTGG...AACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAATCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR CAA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTGCTGACATGTCTTGGTaGCCATTGTTGGGGGATCTT +
Preference number: 5 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPADMSW*PLLGDL
Trigger: AAGATCCCCCAACAATGGCAACCAAGACATGTCAGC...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CAA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAAGCTGACATGTCTTGGTaGCCATTGTTGGGGGATCTT +
Preference number: 5 (lower is better)
Translates to: MILVIGTWQNSDSITFWEADMSW*PLLGDL
Trigger: AAGATCCCCCAACAATGGCAACCAAGACATGTCAGC...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTAACAAACACCGTGCTTTaGTGTGCGGGTTACAATCTA +
Preference number: 5 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLTNTVL*CAGYNL
Trigger: TAGATTGTAACCCGCACACAAAAGCACGGTGTTTGT...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CAA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATGGTAGCAAGGGAAACTaGTGGCAGGGGCCACCCATA +
Preference number: 5 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNGSKGN*WQGPPI
Trigger: TATGGGTGGCCCCTGCCACAAGTTTCCCTTGCTACC...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS TCA 90 bp TGCTCCATCCGATTAATTGTCATCAAGGTATCAGATACTGCCCTTTaGCTGAATGTTGCTACTTCTTGCTTCAGACGAGACAGAGGAGTA +
Preference number: 5 (lower is better)
Translates to: CSIRLIVIKVSDTAL*LNVATSCFRRDRGV
Trigger: TACTCCTCTGTCTCGTCTGAAGCAAGAAGTAGCAACATTCAGTCAAAGGGCAGTATCTGATACCTTGATGACAATTAATCGGATGGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000418208.5
ENST00000425178.5
ENST00000438804.5
ENST00000476602.1
ENST00000494560.1
ENST00000617388.4
CDS GCA 90 bp ATTAATTGTCATCAAGGTATCAGATACTGCCCTTTGACTGAATGTTaGTACTTCTTGCTTCAGACGAGACAGAGGAGTACACAGGGCCAA +
Preference number: 5 (lower is better)
Translates to: INCHQGIRYCPLTEC*YFLLQTRQRSTQGQ
Trigger: TTGGCCCTGTGTACTCCTCTGTCTCGTCTGAAGCAAGAAGTAGCAACATTCAGTCAAAGGGCAGTATCTGATACCTTGATGACAATTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000418208.5
ENST00000425178.5
ENST00000438804.5
ENST00000450143.5
ENST00000476602.1
ENST00000494560.1
ENST00000617388.4
CDS-3UTR CAA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGATCTTCTGGTCTGGGTaGCCCAAAGGAATCCATGGA +
Preference number: 5 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQIFWSG*PKGIHG
Trigger: TCCATGGATTCCTTTGGGCAACCCAGACCAGAAGAT...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp CTTGAGTTGCATCCCGTTCTGCTTGAAATTTTAAAAAGAGCCCTAGCTCATTTTATCTTCTGGTCTGGGTaGCCCAAAGGAATCCATGGA +
Preference number: 5 (lower is better)
Translates to: LELHPVLLEILKRALAHFIFWSG*PKGIHG
Trigger: TCCATGGATTCCTTTGGGCAACCCAGACCAGAAGAT...AAAATGAGCTAGGGCTCTTTTTAAAATTTCAAGCAGAACGGGATGCAACTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437978.5
CDS-3UTR CAA 90 bp TGGAAAAATAGCTTATGTTGGGCTTCTGGATGTGACCCATCTTTACCAACCATTTTTTGCCAGCTTGAGTaGCATCCCGTTCTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: WKNSLCWASGCDPSLPTIFCQLE*HPVLLE
Trigger: TTCAAGCAGAACGGGATGCAACTCAAGCTGGCAAAA...AATGGTTGGTAAAGATGGGTCACATCCAGAAGCCCAACATAAGCTATTTTTCCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp CTTGAGTTGCATCCCGTTCTGCTTGAAATTTTAAAAAGAGCCCTAGCTCATTTTCATCATTTTGCCAGCTaGAGTTGCATCCCGTTCTGC +
Preference number: 5 (lower is better)
Translates to: LELHPVLLEILKRALAHFHHFAS*SCIPFC
Trigger: GCAGAACGGGATGCAACTCAAGCTGGCAAAATGATG...AAAATGAGCTAGGGCTCTTTTTAAAATTTCAAGCAGAACGGGATGCAACTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000437978.5
CDS-3UTR CAA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATGAATGTTGCTACTTCTaGCTTCAGACGAGACAGAGG +
Preference number: 5 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYECCYF*LQTRQR
Trigger: CCTCTGTCTCGTCTGAAGCAAGAAGTAGCAACATTC...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCGTCTGGGTCCAGCTCTaGGGATACATCTTTCATCCA +
Preference number: 5 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSVWVQL*GYIFHP
Trigger: TGGATGAAAGATGTATCCCAAGAGCTGGACCCAGAC...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CAA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTAGTTCACTCTCAAAGCTaGCTTCCTCATCAGACAAAA +
Preference number: 5 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLVHSQS*LPHQTK
Trigger: TTTTGTCTGATGAGGAAGCAAGCTTTGAGAGTGAAC...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CAA 90 bp TTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTAATTTCATGTCTTGGTTGCCATaGTTGGGGGATCTTGTTAAT +
Preference number: 5 (lower is better)
Translates to: LNQADMSWLPLLGDLVNFMSWLP*LGDLVN
Trigger: ATTAACAAGATCCCCCAACAATGGCAACCAAGACAT...GAAATTAACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR CAA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTAATGTCTTGGTTGCCATaGTTGGGGGATCTTGTTAAT +
Preference number: 5 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLMSWLP*LGDLVN
Trigger: ATTAACAAGATCCCCCAACAATGGCAACCAAGACAT...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CAA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGAGCTGACATGTCTTGGTaGCCATTGTTGGGGGATCTT +
Preference number: 5 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGADMSW*PLLGDL
Trigger: AAGATCCCCCAACAATGGCAACCAAGACATGTCAGC...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCGCTGACATGTCTTGGTaGCCATTGTTGGGGGATCTT +
Preference number: 5 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSADMSW*PLLGDL
Trigger: AAGATCCCCCAACAATGGCAACCAAGACATGTCAGC...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CAA 90 bp AACAGATTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTACCATCTGTCTAAAGTaGGCTGACAGGTGTTATATT +
Preference number: 5 (lower is better)
Translates to: NRLNQADMSWLPLLGDLVTICLK*ADRCYI
Trigger: AATATAACACCTGTCAGCCAACTTTAGACAGATGGT...AACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAATCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR CAA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTATAACAGGGACTTCCTaGCACACATGTGAGGGAGAT +
Preference number: 5 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPITGTS*HTCEGD
Trigger: ATCTCCCTCACATGTGTGCAAGGAAGTCCCTGTTAT...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTCTGTTTGTGGAGATGTaGAGGCAGCAAGAAAACCGG +
Preference number: 5 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCLFVEM*RQQENR
Trigger: CCGGTTTTCTTGCTGCCTCAACATCTCCACAAACAG...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAATTTTGCCAGCTTGAGTaGCATCCCGTTCTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKFCQLE*HPVLLE
Trigger: TTCAAGCAGAACGGGATGCAACTCAAGCTGGCAAAA...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp CAGATTTTGCTTAGTAATCAAATAGAACCTCAGATCATGTCACCCACAGAAAGACATCATTTTGCCAGCTaGAGTTGCATCCCGTTCTGC +
Preference number: 5 (lower is better)
Translates to: QILLSNQIEPQIMSPTERHHFAS*SCIPFC
Trigger: GCAGAACGGGATGCAACTCAAGCTGGCAAAATGATG...TCTTTCTGTGGGTGACATGATCTGAGGTTCTATTTGATTACTAAGCAAAATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTGAATGTTGCTACTTCTaGCTTCAGACGAGACAGAGG +
Preference number: 5 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCECCYF*LQTRQR
Trigger: CCTCTGTCTCGTCTGAAGCAAGAAGTAGCAACATTC...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGGAATGTTGCTACTTCTaGCTTCAGACGAGACAGAGG +
Preference number: 5 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQECCYF*LQTRQR
Trigger: CCTCTGTCTCGTCTGAAGCAAGAAGTAGCAACATTC...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGGTCTGGGTCCAGCTCTaGGGATACATCTTTCATCCA +
Preference number: 5 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRVWVQL*GYIFHP
Trigger: TGGATGAAAGATGTATCCCAAGAGCTGGACCCAGAC...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp AACAGATTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTTTGTCAAAAGAAGCTTaGCTATTTCTCACTTGCATC +
Preference number: 5 (lower is better)
Translates to: NRLNQADMSWLPLLGDLVLSKEA*LFLTCI
Trigger: GATGCAAGTGAGAAATAGCAAAGCTTCTTTTGACAA...AACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAATCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR CAA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAAACAGGCTTCATGAATTaGGGACATCATTCGAGCTGT +
Preference number: 5 (lower is better)
Translates to: MILVIGTWQNSDSITFWETGFMN*GHHSSC
Trigger: ACAGCTCGAATGATGTCCCAAATTCATGAAGCCTGT...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp TTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTAATTTCGTGTCTTGTAGTTGCTaGAGAGCTACAAAATCATAC +
Preference number: 5 (lower is better)
Translates to: LNQADMSWLPLLGDLVNFVSCSC*RATKSY
Trigger: GTATGATTTTGTAGCTCTCAAGCAACTACAAGACAC...GAAATTAACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR CAA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCATAACAGGGACTTCCTaGCACACATGTGAGGGAGAT +
Preference number: 5 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSITGTS*HTCEGD
Trigger: ATCTCCCTCACATGTGTGCAAGGAAGTCCCTGTTAT...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTTTCCTAGTATGGACTTaGGGTTTCTGCTTTGTCTGC +
Preference number: 5 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPFLVWT*GFCFVC
Trigger: GCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAA...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACTAAGGAAGTTAATGTaGCTCTGGGTTAAATGGGAA +
Preference number: 5 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLLRKLM*LWVKWE
Trigger: TTCCCATTTAACCCAGAGCAACATTAACTTCCTTAG...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp TGGAAAAATAGCTTATGTTGGGCTTCTGGATGTGACCCATCTTTACCAACCATTCAGTGGTTGGACTTGTaGGAAGTTAGAACTGGACTT +
Preference number: 5 (lower is better)
Translates to: WKNSLCWASGCDPSLPTIQWLDL*EVRTGL
Trigger: AAGTCCAGTTCTAACTTCCAACAAGTCCAACCACTG...AATGGTTGGTAAAGATGGGTCACATCCAGAAGCCCAACATAAGCTATTTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACTTCAAAAACAGTGGTaGGACTTGTTGGAAGTTAGA +
Preference number: 5 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLLQKQW*DLLEVR
Trigger: TCTAACTTCCAACAAGTCCAACCACTGTTTTTGAAG...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGTCTGGGACTGCTTCATaGCTCAAGGTAGAGAAATGC +
Preference number: 5 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQSGTAS*LKVEKC
Trigger: GCATTTCTCTACCTTGAGCAATGAAGCAGTCCCAGA...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGATCTGGGACTGCTTCATaGCTCAAGGTAGAGAAATGC +
Preference number: 5 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGSGTAS*LKVEKC
Trigger: GCATTTCTCTACCTTGAGCAATGAAGCAGTCCCAGA...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATATCTTCTGGTCTGGGTaGCCCAAAGGAATCCATGGA +
Preference number: 5 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNIFWSG*PKGIHG
Trigger: TCCATGGATTCCTTTGGGCAACCCAGACCAGAAGAT...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATATCTTCTGGTCTGGGTaGCCCAAAGGAATCCATGGA +
Preference number: 5 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYIFWSG*PKGIHG
Trigger: TCCATGGATTCCTTTGGGCAACCCAGACCAGAAGAT...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CAA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTTTCAGTGCATGTCTCTaGAACAGAGTGAAAAACCTC +
Preference number: 5 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPFSACL*NRVKNL
Trigger: GAGGTTTTTCACTCTGTTCAAGAGACATGCACTGAA...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CAA 90 bp TTGAACCAGGCTGACATGTCTTGGTTGCCATTGTTGGGGGATCTTGTTAATTTCTCCTCTGATATAACATaGAGTCTTAGCTGGTATTTC +
Preference number: 5 (lower is better)
Translates to: LNQADMSWLPLLGDLVNFSSDIT*SLSWYF
Trigger: GAAATACCAGCTAAGACTCAATGTTATATCAGAGGA...GAAATTAACAAGATCCCCCAACAATGGCAACCAAGACATGTCAGCCTGGTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR CAA 90 bp CAGATTTTGCTTAGTAATCAAATAGAACCTCAGATCATGTCACCCACAGAAAGATTTTGCCAGCTTGAGTaGCATCCCGTTCTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: QILLSNQIEPQIMSPTERFCQLE*HPVLLE
Trigger: TTCAAGCAGAACGGGATGCAACTCAAGCTGGCAAAA...TCTTTCTGTGGGTGACATGATCTGAGGTTCTATTTGATTACTAAGCAAAATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATCATCATTTTGCCAGCTaGAGTTGCATCCCGTTCTGC +
Preference number: 5 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNHHFAS*SCIPFC
Trigger: GCAGAACGGGATGCAACTCAAGCTGGCAAAATGATG...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp TGGAAAAATAGCTTATGTTGGGCTTCTGGATGTGACCCATCTTTACCAACCATTATCAGATACTGCCCTTaGACTGAATGTTGCTACTTC +
Preference number: 5 (lower is better)
Translates to: WKNSLCWASGCDPSLPTIIRYCP*TECCYF
Trigger: GAAGTAGCAACATTCAGTCAAAGGGCAGTATCTGAT...AATGGTTGGTAAAGATGGGTCACATCCAGAAGCCCAACATAAGCTATTTTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCACAGGCTTCATGAATTaGGGACATCATTCGAGCTGT +
Preference number: 5 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFTGFMN*GHHSSC
Trigger: ACAGCTCGAATGATGTCCCAAATTCATGAAGCCTGT...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTTTGTCTTCACTAATCTaGCTTGGCGTGTCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPLSSLI*LGVSCS
Trigger: ACTACAAGACACGCCAAGCAAGATTAGTGAAGACAA...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CAA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTGTGATCTTTGTTTGCTaGTTCACTCTCAAAGCTTGC +
Preference number: 5 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPVIFVC*FTLKAC
Trigger: GCAAGCTTTGAGAGTGAACAAGCAAACAAAGATCAC...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CAA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAAGTGATCTTTGTTTGCTaGTTCACTCTCAAAGCTTGC +
Preference number: 5 (lower is better)
Translates to: MILVIGTWQNSDSITFWEVIFVC*FTLKAC
Trigger: GCAAGCTTTGAGAGTGAACAAGCAAACAAAGATCAC...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATGAATACTATTGCCAGTaGCTTAGGGAATATTCTCCC +
Preference number: 5 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYEYYCQ*LREYSP
Trigger: GGGAGAATATTCCCTAAGCAACTGGCAATAGTATTC...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAACAGCCTATACTGTACTaGGCCATTGTAGTAGTTTTC +
Preference number: 5 (lower is better)
Translates to: MILVIGTWQNSDSITFWEQPILY*AIVVVF
Trigger: GAAAACTACTACAATGGCCAAGTACAGTATAGGCTG...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTTTCGTAATCATGATCTaGGTGATTGGAACTTGGCAG +
Preference number: 5 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPFVIMI*VIGTWQ
Trigger: CTGCCAAGTTCCAATCACCAAGATCATGATTACGAA...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTTTCCTAGTATGGACTTaGGGTTTCTGCTTTGTCTGC +
Preference number: 5 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCFLVWT*GFCFVC
Trigger: GCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAA...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGACAGTGGTTGGACTTGTaGGAAGTTAGAACTGGACTT +
Preference number: 5 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGQWLDL*EVRTGL
Trigger: AAGTCCAGTTCTAACTTCCAACAAGTCCAACCACTG...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTCAGTGGTTGGACTTGTaGGAAGTTAGAACTGGACTT +
Preference number: 5 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCQWLDL*EVRTGL
Trigger: AAGTCCAGTTCTAACTTCCAACAAGTCCAACCACTG...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp AAGTTGGCTGACAGGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTATCAGGAAACAAACTCTaGTTTTATGCCTTCTTGCAA +
Preference number: 5 (lower is better)
Translates to: KLADRCYIHKHRAFVCGLSGNKL*FYAFLQ
Trigger: TTGCAAGAAGGCATAAAACAAGAGTTTGTTTCCTGA...TAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACCTGTCAGCCAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATCTGTTTGTGGAGATGTaGAGGCAGCAAGAAAACCGG +
Preference number: 5 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNLFVEM*RQQENR
Trigger: CCGGTTTTCTTGCTGCCTCAACATCTCCACAAACAG...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTTTCAGTGCATGTCTCTaGAACAGAGTGAAAAACCTC +
Preference number: 5 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCFSACL*NRVKNL
Trigger: GAGGTTTTTCACTCTGTTCAAGAGACATGCACTGAA...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGTTCAGTGCATGTCTCTaGAACAGAGTGAAAAACCTC +
Preference number: 5 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQFSACL*NRVKNL
Trigger: GAGGTTTTTCACTCTGTTCAAGAGACATGCACTGAA...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp CATTATAACTTCAGTCAAGCATTAAGAAGTTCATCATCTGAGTGTCCAATAGCATTTTGCCAGCTTGAGTaGCATCCCGTTCTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: HYNFSQALRSSSSECPIAFCQLE*HPVLLE
Trigger: TTCAAGCAGAACGGGATGCAACTCAAGCTGGCAAAA...TGCTATTGGACACTCAGATGATGAACTTCTTAATGCTTGACTGAAGTTATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR CAA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATGTGTCTTGTAGTTGCTaGAGAGCTACAAAATCATAC +
Preference number: 5 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYVSCSC*RATKSY
Trigger: GTATGATTTTGTAGCTCTCAAGCAACTACAAGACAC...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTTTGTCTTCACTAATCTaGCTTGGCGTGTCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCLSSLI*LGVSCS
Trigger: ACTACAAGACACGCCAAGCAAGATTAGTGAAGACAA...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTCCAGAACTTAGGAGGTaGTTCAGAAATGAGAATTCC +
Preference number: 5 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCPELRR*FRNENS
Trigger: GGAATTCTCATTTCTGAACAACCTCCTAAGTTCTGG...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTCATTGTTGGGGGATCTaGTTAATTTCTTTGGACTCT +
Preference number: 5 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPHCWGI*LISLDS
Trigger: AGAGTCCAAAGAAATTAACAAGATCCCCCAACAATG...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CAA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCTCTTGGTTGCCATTGTaGGGGGATCTTGTTAATTTC +
Preference number: 5 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFSWLPL*GDLVNF
Trigger: GAAATTAACAAGATCCCCCAACAATGGCAACCAAGA...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCTCTTGGTTGCCATTGTaGGGGGATCTTGTTAATTTC +
Preference number: 5 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSSWLPL*GDLVNF
Trigger: GAAATTAACAAGATCCCCCAACAATGGCAACCAAGA...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CAA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGATGTCTTGGTTGCCATaGTTGGGGGATCTTGTTAAT +
Preference number: 5 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQMSWLP*LGDLVN
Trigger: ATTAACAAGATCCCCCAACAATGGCAACCAAGACAT...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp CAGATTTTGCTTAGTAATCAAATAGAACCTCAGATCATGTCACCCACAGAAAGAACAAACACCGTGCTTTaGTGTGCGGGTTACAATCTA +
Preference number: 5 (lower is better)
Translates to: QILLSNQIEPQIMSPTERTNTVL*CAGYNL
Trigger: TAGATTGTAACCCGCACACAAAAGCACGGTGTTTGT...TCTTTCTGTGGGTGACATGATCTGAGGTTCTATTTGATTACTAAGCAAAATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATAAGCTCAACTCCATATaGACAGAATTATTCCTAGCC +
Preference number: 5 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYKLNSI*TELFLA
Trigger: GGCTAGGAATAATTCTGTCAATATGGAGTTGAGCTT...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGGAATACTATTGCCAGTaGCTTAGGGAATATTCTCCC +
Preference number: 5 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQEYYCQ*LREYSP
Trigger: GGGAGAATATTCCCTAAGCAACTGGCAATAGTATTC...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp GATAGAGCACATGTAAACTTCCTTCGTTCTAATGCTGTAAGACCTCTACATTTCTTCGTAATCATGATCTaGGTGATTGGAACTTGGCAG +
Preference number: 5 (lower is better)
Translates to: DRAHVNFLRSNAVRPLHFFVIMI*VIGTWQ
Trigger: CTGCCAAGTTCCAATCACCAAGATCATGATTACGAA...GAAATGTAGAGGTCTTACAGCATTAGAACGAAGGAAGTTTACATGTGCTCTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGATTCGTAATCATGATCTaGGTGATTGGAACTTGGCAG +
Preference number: 5 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGFVIMI*VIGTWQ
Trigger: CTGCCAAGTTCCAATCACCAAGATCATGATTACGAA...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGTTCCTAGTATGGACTTaGGGTTTCTGCTTTGTCTGC +
Preference number: 5 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRFLVWT*GFCFVC
Trigger: GCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAA...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAAAAACAGTGGTTGGACTaGTTGGAAGTTAGAACTGGA +
Preference number: 5 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKKQWLD*LEVRTG
Trigger: TCCAGTTCTAACTTCCAACAAGTCCAACCACTGTTT...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp CAGATTTTGCTTAGTAATCAAATAGAACCTCAGATCATGTCACCCACAGAAAGATTCAGTGCATGTCTCTaGAACAGAGTGAAAAACCTC +
Preference number: 5 (lower is better)
Translates to: QILLSNQIEPQIMSPTERFSACL*NRVKNL
Trigger: GAGGTTTTTCACTCTGTTCAAGAGACATGCACTGAA...TCTTTCTGTGGGTGACATGATCTGAGGTTCTATTTGATTACTAAGCAAAATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATTCCTCTGATATAACATaGAGTCTTAGCTGGTATTTC +
Preference number: 5 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYSSDIT*SLSWYF
Trigger: GAAATACCAGCTAAGACTCAATGTTATATCAGAGGA...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp CAGATTTTGCTTAGTAATCAAATAGAACCTCAGATCATGTCACCCACAGAAAGAATCAGATACTGCCCTTaGACTGAATGTTGCTACTTC +
Preference number: 5 (lower is better)
Translates to: QILLSNQIEPQIMSPTERIRYCP*TECCYF
Trigger: GAAGTAGCAACATTCAGTCAAAGGGCAGTATCTGAT...TCTTTCTGTGGGTGACATGATCTGAGGTTCTATTTGATTACTAAGCAAAATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp TGGAAAAATAGCTTATGTTGGGCTTCTGGATGTGACCCATCTTTACCAACCATTTTGTCAAAAGAAGCTTaGCTATTTCTCACTTGCATC +
Preference number: 5 (lower is better)
Translates to: WKNSLCWASGCDPSLPTILSKEA*LFLTCI
Trigger: GATGCAAGTGAGAAATAGCAAAGCTTCTTTTGACAA...AATGGTTGGTAAAGATGGGTCACATCCAGAAGCCCAACATAAGCTATTTTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATACAGGCTTCATGAATTaGGGACATCATTCGAGCTGT +
Preference number: 5 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNTGFMN*GHHSSC
Trigger: ACAGCTCGAATGATGTCCCAAATTCATGAAGCCTGT...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCGTGTCTTGTAGTTGCTaGAGAGCTACAAAATCATAC +
Preference number: 5 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSVSCSC*RATKSY
Trigger: GTATGATTTTGTAGCTCTCAAGCAACTACAAGACAC...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CAA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAACATTGTTGGGGGATCTaGTTAATTTCTTTGGACTCT +
Preference number: 5 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKHCWGI*LISLDS
Trigger: AGAGTCCAAAGAAATTAACAAGATCCCCCAACAATG...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp CAGATTTTGCTTAGTAATCAAATAGAACCTCAGATCATGTCACCCACAGAAAGATCTTGGTTGCCATTGTaGGGGGATCTTGTTAATTTC +
Preference number: 5 (lower is better)
Translates to: QILLSNQIEPQIMSPTERSWLPL*GDLVNF
Trigger: GAAATTAACAAGATCCCCCAACAATGGCAACCAAGA...TCTTTCTGTGGGTGACATGATCTGAGGTTCTATTTGATTACTAAGCAAAATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGAACCATCTGTCTAAAGTaGGCTGACAGGTGTTATATT +
Preference number: 5 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGTICLK*ADRCYI
Trigger: AATATAACACCTGTCAGCCAACTTTAGACAGATGGT...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCAAGCTCAACTCCATATaGACAGAATTATTCCTAGCC +
Preference number: 5 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSKLNSI*TELFLA
Trigger: GGCTAGGAATAATTCTGTCAATATGGAGTTGAGCTT...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CAA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATATTTCGGGAGAACTTTaGCTTTTGGAAAATTTAGGG +
Preference number: 5 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYISGEL*LLENLG
Trigger: CCCTAAATTTTCCAAAAGCAAAAGTTCTCCCGAAAT...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp ATGATCTTGGTGATTGGAACTTGGCAGAACAGTGACAGTATTACATTCTGGGAAAATAATAAAAGTCCCTaGTATGTCTCCATTTCGGGA +
Preference number: 5 (lower is better)
Translates to: MILVIGTWQNSDSITFWENNKSP*YVSISG
Trigger: TCCCGAAATGGAGACATACAAGGGACTTTTATTATT...TTCCCAGAATGTAATACTGTCACTGTTCTGCCAAGTTCCAATCACCAAGATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp AGGGTGTTCCTAGTATGGACTTTGGGTTTCTGCTTTGTCTGCTTGTTAAAGTATAATAATAAAAGTCCCTaGTATGTCTCCATTTCGGGA +
Preference number: 5 (lower is better)
Translates to: RVFLVWTLGFCFVCLLKYNNKSP*YVSISG
Trigger: TCCCGAAATGGAGACATACAAGGGACTTTTATTATT...ATACTTTAACAAGCAGACAAAGCAGAAACCCAAAGTCCATACTAGGAACACCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGACTAAGGAAGTTAATGTaGCTCTGGGTTAAATGGGAA +
Preference number: 5 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGLRKLM*LWVKWE
Trigger: TTCCCATTTAACCCAGAGCAACATTAACTTCCTTAG...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp GGTGTTATATTCACAAACACCGTGCTTTTGTGTGCGGGTTACAATCTAAATCCTAAGTTAGAACTGGACTaGCTAAGGAAGTTAATGTTG +
Preference number: 5 (lower is better)
Translates to: GVIFTNTVLLCAGYNLNPKLELD*LRKLML
Trigger: CAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTT...AGGATTTAGATTGTAACCCGCACACAAAAGCACGGTGTTTGTGAATATAACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp TGCATTCTGAGTTTTAGGAGATGGGAAGATAGATTTTTCTGTTTCTGCAGAGGAGTGAAGAACCATGTTTaGACTTTAAATGCCAAGGAC +
Preference number: 5 (lower is better)
Translates to: CILSFRRWEDRFFCFCRGVKNHV*TLNAKD
Trigger: GTCCTTGGCATTTAAAGTCAAAACATGGTTCTTCAC...TCCTCTGCAGAAACAGAAAAATCTATCTTCCCATCTCCTAAAACTCAGAATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCGTGAAGAACCATGTTTaGACTTTAAATGCCAAGGAC +
Preference number: 5 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSVKNHV*TLNAKD
Trigger: GTCCTTGGCATTTAAAGTCAAAACATGGTTCTTCAC...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS-3UTR CAA 90 bp ATAGAATTCAGATTGGGATTCGTAATCATGATCTTGGTGATTGGAACTTGGCAGTCCTCTGATATAACATaGAGTCTTAGCTGGTATTTC +
Preference number: 5 (lower is better)
Translates to: IEFRLGFVIMILVIGTWQSSDIT*SLSWYF
Trigger: GAAATACCAGCTAAGACTCAATGTTATATCAGAGGA...CTGCCAAGTTCCAATCACCAAGATCATGATTACGAATCCCAATCTGAATTCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp AAGAGCCCTAGCTCATTTTCTTCCTCTGATATAACATTGAGTCTTAGCTGGTATTCCTCTGATATAACATaGAGTCTTAGCTGGTATTTC +
Preference number: 5 (lower is better)
Translates to: KSPSSFSSSDITLSLSWYSSDIT*SLSWYF
Trigger: GAAATACCAGCTAAGACTCAATGTTATATCAGAGGA...ATACCAGCTAAGACTCAATGTTATATCAGAGGAAGAAAATGAGCTAGGGCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437978.5
CDS-3UTR CAA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTTTGTCAAAAGAAGCTTaGCTATTTCTCACTTGCATC +
Preference number: 5 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCLSKEA*LFLTCI
Trigger: GATGCAAGTGAGAAATAGCAAAGCTTCTTTTGACAA...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAATTGTCAAAAGAAGCTTaGCTATTTCTCACTTGCATC +
Preference number: 5 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKLSKEA*LFLTCI
Trigger: GATGCAAGTGAGAAATAGCAAAGCTTCTTTTGACAA...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATTTGTCTTCACTAATCTaGCTTGGCGTGTCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNLSSLI*LGVSCS
Trigger: ACTACAAGACACGCCAAGCAAGATTAGTGAAGACAA...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp CATTATAACTTCAGTCAAGCATTAAGAAGTTCATCATCTGAGTGTCCAATAGCAGTTCACTCTCAAAGCTaGCTTCCTCATCAGACAAAA +
Preference number: 5 (lower is better)
Translates to: HYNFSQALRSSSSECPIAVHSQS*LPHQTK
Trigger: TTTTGTCTGATGAGGAAGCAAGCTTTGAGAGTGAAC...TGCTATTGGACACTCAGATGATGAACTTCTTAATGCTTGACTGAAGTTATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS-3UTR CAA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATGTTCACTCTCAAAGCTaGCTTCCTCATCAGACAAAA +
Preference number: 5 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNVHSQS*LPHQTK
Trigger: TTTTGTCTGATGAGGAAGCAAGCTTTGAGAGTGAAC...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATGTGATCTTTGTTTGCTaGTTCACTCTCAAAGCTTGC +
Preference number: 5 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYVIFVC*FTLKAC
Trigger: GCAAGCTTTGAGAGTGAACAAGCAAACAAAGATCAC...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS-3UTR CAA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATCCAGAACTTAGGAGGTaGTTCAGAAATGAGAATTCC +
Preference number: 5 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNPELRR*FRNENS
Trigger: GGAATTCTCATTTCTGAACAACCTCCTAAGTTCTGG...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp CAGATTTTGCTTAGTAATCAAATAGAACCTCAGATCATGTCACCCACAGAAAGACATTGTTGGGGGATCTaGTTAATTTCTTTGGACTCT +
Preference number: 5 (lower is better)
Translates to: QILLSNQIEPQIMSPTERHCWGI*LISLDS
Trigger: AGAGTCCAAAGAAATTAACAAGATCCCCCAACAATG...TCTTTCTGTGGGTGACATGATCTGAGGTTCTATTTGATTACTAAGCAAAATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATATGTCTTGGTTGCCATaGTTGGGGGATCTTGTTAAT +
Preference number: 5 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNMSWLP*LGDLVN
Trigger: ATTAACAAGATCCCCCAACAATGGCAACCAAGACAT...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATCAGCCTATACTGTACTaGGCCATTGTAGTAGTTTTC +
Preference number: 5 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNQPILY*AIVVVF
Trigger: GAAAACTACTACAATGGCCAAGTACAGTATAGGCTG...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTGGTATAGAATTCAGATaGGGATTCGTAATCATGATC +
Preference number: 5 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCGIEFR*GFVIMI
Trigger: GATCATGATTACGAATCCCAATCTGAATTCTATACC...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp TGTTGGAAGTTAGAACTGGACTTGCTAAGGAAGTTAATGTTGCTCTGGGTTAAAGGTATAGAATTCAGATaGGGATTCGTAATCATGATC +
Preference number: 5 (lower is better)
Translates to: CWKLELDLLRKLMLLWVKGIEFR*GFVIMI
Trigger: GATCATGATTACGAATCCCAATCTGAATTCTATACC...TTTAACCCAGAGCAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTTCCAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTTTCTGCTTTGTCTGCTaGTTAAAGTATCTGTATTCG +
Preference number: 5 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCFCFVC*LKYLYS
Trigger: CGAATACAGATACTTTAACAAGCAGACAAAGCAGAA...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp GGAAGTAGAAAAATGAGACACTCCCTTATTGATCACACAGAGCTTTCTGTATGTATTTCGGGAGAACTTTaGCTTTTGGAAAATTTAGGG +
Preference number: 5 (lower is better)
Translates to: GSRKMRHSLIDHTELSVCISGEL*LLENLG
Trigger: CCCTAAATTTTCCAAAAGCAAAAGTTCTCCCGAAAT...ACATACAGAAAGCTCTGTGTGATCAATAAGGGAGTGTCTCATTTTTCTACTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp ACTGACCCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCAAGTTAGAACTGGACTaGCTAAGGAAGTTAATGTTG +
Preference number: 5 (lower is better)
Translates to: TDPKPQPNLHAIYLSLLSKLELD*LRKLML
Trigger: CAACATTAACTTCCTTAGCAAGTCCAGTTCTAACTT...GGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGGGTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATAAACAGTGGTTGGACTaGTTGGAAGTTAGAACTGGA +
Preference number: 5 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNKQWLD*LEVRTG
Trigger: TCCAGTTCTAACTTCCAACAAGTCCAACCACTGTTT...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp CCCAAACCACAACCCAATTTACATGCTATCTATCTATCTTTGTTATCCACATATCTAAGGAAGTTAATGTaGCTCTGGGTTAAATGGGAA +
Preference number: 5 (lower is better)
Translates to: PKPQPNLHAIYLSLLSTYLRKLM*LWVKWE
Trigger: TTCCCATTTAACCCAGAGCAACATTAACTTCCTTAG...ATATGTGGATAACAAAGATAGATAGATAGCATGTAAATTGGGTTGTGGTTTGGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp ACTTGGGAAATTGCTTCAAAATTAAAGGGTGGGCAATTTAAAAGGACAGGAAATCTTCAAAAACAGTGGTaGGACTTGTTGGAAGTTAGA +
Preference number: 5 (lower is better)
Translates to: TWEIASKLKGGQFKRTGNLQKQW*DLLEVR
Trigger: TCTAACTTCCAACAAGTCCAACCACTGTTTTTGAAG...ATTTCCTGTCCTTTTAAATTGCCCACCCTTTAATTTTGAAGCAATTTCCCAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000617388.4
CDS-3UTR CAA 90 bp GGAGAAGCACACAAGAAAAAGAGAATTTCACTGGTGCATTTAAATGTTACTAGGTCAGGAAACAAACTCTaGTTTTATGCCTTCTTGCAA +
Preference number: 5 (lower is better)
Translates to: GEAHKKKRISLVHLNVTRSGNKL*FYAFLQ
Trigger: TTGCAAGAAGGCATAAAACAAGAGTTTGTTTCCTGA...CCTAGTAACATTTAAATGCACCAGTGAAATTCTCTTTTTCTTGTGTGCTTCTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000617388.4
CDS CCA 72 bp GCCCCAGGCTGCCGCGCTCCTTCACTACAGCGAGCGTaGCCGGGAGGCGCCCTTCCGCCGCAGGGGACCCAG +
Preference number: 6 (lower is better)
Translates to: APGCRAPSLQRA*PGGALPPQGTQ
Trigger: CTGGGTCCCCTGCGGCGGAAGGGCGCCTCCCGGCCACGCTCGCTGTAGTGAAGGAGCGCGGCAGCCTGGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421334.1
ENST00000438804.5
ENST00000457524.5
ENST00000484561.5
ENST00000617388.4
CDS TCA 72 bp CTCTTCCGCCTCCTCGGGTCGCGTTCGGCCGTACGGTaGTCCGTCCCGGCACCCGTTCCGGCCACCGCCCGC +
Preference number: 6 (lower is better)
Translates to: LFRLLGSRSAVR*SVPAPVPATAR
Trigger: GCGGGCGGTGGCCGGAACGGGTGCCGGGACGGATCACCGTACGGCCGAACGCGACCCGAGGAGGCGGAAGAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358299.7
ENST00000419460.5
CDS GCA 72 bp GTGGGGTCGGGTTGCCGGCCTAAGGAGCAGGATCTGTaGGCGGAGCCCCTCGCGGGCCCGTGCATTCTGCAG +
Preference number: 6 (lower is better)
Translates to: VGSGCRPKEQDL*AEPLAGPCILQ
Trigger: CTGCAGAATGCACGGGCCCGCGAGGGGCTCCGCGCACAGATCCTGCTCCTTAGGCCGGCAACCCGACCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421334.1
CDS GCA 72 bp CACCGCCGAGGGAAATCACCCAAACGAGCCCCAGGCTaGCGCGCTCCTTCACTACAGCGAGCGTGGCCGGGA +
Preference number: 6 (lower is better)
Translates to: HRRGKSPKRAPG*RAPSLQRAWPG
Trigger: TCCCGGCCACGCTCGCTGTAGTGAAGGAGCGCGGCAGCCTGGGGCTCGTTTGGGTGATTTCCCTCGGCGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421334.1
ENST00000438804.5
ENST00000457524.5
ENST00000484561.5
ENST00000617388.4
CDS GCA 72 bp GTTTCCAGGAGCCATATCTGTGCCGTGGGGTCGGGTTaGCGGCCTAAGGAGCAGGATCTGTGCGCGGAGCCC +
Preference number: 6 (lower is better)
Translates to: VSRSHICAVGSG*RPKEQDLCAEP
Trigger: GGGCTCCGCGCACAGATCCTGCTCCTTAGGCCGGCAACCCGACCCCACGGCACAGATATGGCTCCTGGAAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411681.5
ENST00000421334.1
ENST00000450143.5
CDS TCA 72 bp TCGTCTTACAGTACGTCGCCTGGGCACCTGACCAGCTaGCGCGCGTTTCCAGGAGCCATATCTGTGCCGTGG +
Preference number: 6 (lower is better)
Translates to: SSYSTSPGHLTS*RAFPGAISVPW
Trigger: CCACGGCACAGATATGGCTCCTGGAAACGCGCGTCAGCTGGTCAGGTGCCCAGGCGACGTACTGTAAGACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411681.5
ENST00000421334.1
CDS GCA 72 bp ATCTGTGCGCGGAGCCCCTCGCGGGCCCGTGCATTCTaGAGTTCAGCTCAAACTGCACATTTACTATGTTTT +
Preference number: 6 (lower is better)
Translates to: ICARSPSRARAF*SSAQTAHLLCF
Trigger: AAAACATAGTAAATGTGCAGTTTGAGCTGAACTGCAGAATGCACGGGCCCGCGAGGGGCTCCGCGCACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421334.1
CDS TCA 72 bp CGCTCCAGCCACATGAAAGCCAAGGTCAAAGAGTTGTaGAGGAAGGAATCGAGAAGAATGAGCGAGGGGCTC +
Preference number: 6 (lower is better)
Translates to: RSSHMKAKVKEL*RKESRRMSEGL
Trigger: GAGCCCCTCGCTCATTCTTCTCGATTCCTTCCTTCACAACTCTTTGACCTTGGCTTTCATGTGGCTGGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS TCA 72 bp TCTTCTGGTCTGGGTTGCCCAAAGGAATCCATGGAGTaGCTGATAACGGATGGGTGGGATGAGACTTCAGCT +
Preference number: 6 (lower is better)
Translates to: SSGLGCPKESME*LITDGWDETSA
Trigger: AGCTGAAGTCTCATCCCACCCATCCGTTATCAGTCACTCCATGGATTCCTTTGGGCAACCCAGACCAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000411681.5
ENST00000412210.5
ENST00000419460.5
ENST00000437978.5
ENST00000438804.5
ENST00000454326.5
ENST00000484561.5
CDS GCA 72 bp GGGCCAATCTTTGCTTGGCTGAAGAACAAAGTGCCTTaGCAGTGGCATCCATCATTTTGCCAGCTTGAGTTG +
Preference number: 6 (lower is better)
Translates to: GPIFAWLKNKVP*QWHPSFCQLEL
Trigger: CAACTCAAGCTGGCAAAATGATGGATGCCACTGGCAAGGCACTTTGTTCTTCAGCCAAGCAAAGATTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000419460.5
ENST00000425178.5
ENST00000435143.5
ENST00000438804.5
ENST00000450143.5
ENST00000476602.1
ENST00000617388.4
CDS CCA 72 bp GGTCTAGGGAATCTGGCTTCTTATCAGCACTCCAGATaGTTTCGACACAGTGAATCCATGGACCTCGCTTTG +
Preference number: 6 (lower is better)
Translates to: GLGNLASYQHSR*FRHSESMDLAL
Trigger: CAAAGCGAGGTCCATGGATTCACTGTGTCGAAACCATCTGGAGTGCTGATAAGAAGCCAGATTCCCTAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476602.1
CDS CCA 72 bp CTGGCACTGGGGCTCCCAAAGGCAGTCTGGCATTCTTaGGTAAATTCACTAGTACTTGAAGAACCAGAACTT +
Preference number: 6 (lower is better)
Translates to: LALGLPKAVWHS*VNSLVLEEPEL
Trigger: AAGTTCTGGTTCTTCAAGTACTAGTGAATTTACCCAAGAATGCCAGACTGCCTTTGGGAGCCCCAGTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS CAA 90 bp CATCAAGGTATCAGATACTGCCCTTTGACTGAATGTTGCTACTTCTaGCTTCAGACGAGACAGAGGAGTACACAGGGCCAATCTAATGGC +
Preference number: 6 (lower is better)
Translates to: HQGIRYCPLTECCYF*LQTRQRSTQGQSNG
Trigger: GCCATTAGATTGGCCCTGTGTACTCCTCTGTCTCGTCTGAAGCAAGAAGTAGCAACATTCAGTCAAAGGGCAGTATCTGATACCTTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494560.1
CDS CAA 90 bp CATCAAGGTATCAGATACTGCCCTTTGACTGAATGTTGCTACTTCTaGCTTCAGACGAGACAGAGGAGTACACAGGGCCAATCTTTGCTT +
Preference number: 6 (lower is better)
Translates to: HQGIRYCPLTECCYF*LQTRQRSTQGQSLL
Trigger: AAGCAAAGATTGGCCCTGTGTACTCCTCTGTCTCGTCTGAAGCAAGAAGTAGCAACATTCAGTCAAAGGGCAGTATCTGATACCTTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000425178.5
ENST00000438804.5
ENST00000450143.5
ENST00000476602.1
ENST00000617388.4
CDS CAA 90 bp CATCAAGGTATCAGATACTGCCCTTTGACTGAATGTTGCTACTTCTaGCTTCAGACGAGACAGAGGAGTACACAGGGCCAATCTCAAGTT +
Preference number: 6 (lower is better)
Translates to: HQGIRYCPLTECCYF*LQTRQRSTQGQSQV
Trigger: AACTTGAGATTGGCCCTGTGTACTCCTCTGTCTCGTCTGAAGCAAGAAGTAGCAACATTCAGTCAAAGGGCAGTATCTGATACCTTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418208.5
CDS GCA 72 bp ATCCACAGTAGAGCTCCTCTGTATTCTGTGCGTGCCTaGTCCATCCGATTAATTGTCATCAAGGTATCAGAT +
Preference number: 6 (lower is better)
Translates to: IHSRAPLYSVRA*SIRLIVIKVSD
Trigger: ATCTGATACCTTGATGACAATTAATCGGATGGAGCAGGCACGCACAGAATACAGAGGAGCTCTACTGTGGAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000418208.5
ENST00000425178.5
ENST00000438804.5
ENST00000476602.1
ENST00000494560.1
ENST00000617388.4
CDS CAA 90 bp CTGCTCCATCCGATTAATTGTCATCAAGGTATCAGATACTGCCCTTaGACTGAATGTTGCTACTTCTTGCTTCAGACGAGACAGAGGAGT +
Preference number: 6 (lower is better)
Translates to: LLHPINCHQGIRYCP*TECCYFLLQTRQRS
Trigger: ACTCCTCTGTCTCGTCTGAAGCAAGAAGTAGCAACATTCAGTCAAAGGGCAGTATCTGATACCTTGATGACAATTAATCGGATGGAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000418208.5
ENST00000425178.5
ENST00000438804.5
ENST00000476602.1
ENST00000494560.1
ENST00000617388.4
CDS CAA 90 bp GTGTGTGAAAGACAAAGTTCTGATTCCTCTTGGGAGACCCAGTCCTaGGACTCAGTGATCCCATTCCTAGCAATTTTTCTTAAGGAAATA +
Preference number: 6 (lower is better)
Translates to: VCERQSSDSSWETQS*DSVIPFLAIFLKEI
Trigger: TATTTCCTTAAGAAAAATTGCTAGGAATGGGATCACTGAGTCCAAGGACTGGGTCTCCCAAGAGGAATCAGAACTTTGTCTTTCACACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438804.5
CDS CAA 72 bp ATCATACGGATGAAAGCCAATACAGGCTTCATGAATTaGGGACATCATTCGAGCTGTTTTCTTCCAGAATCC +
Preference number: 6 (lower is better)
Translates to: IIRMKANTGFMN*GHHSSCFLPES
Trigger: GGATTCTGGAAGAAAACAGCTCGAATGATGTCCCAAATTCATGAAGCCTGTATTGGCTTTCATCCGTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000494560.1
ENST00000617388.4
CDS CAA 90 bp CCCGTGCATTCTGCAGTTCAGCTCAAACTGCACATTTACTATGTTTaGTTTTTATCCATCGGTTGCCAATTAGTTTCTAAGGAAGACATT +
Preference number: 6 (lower is better)
Translates to: PVHSAVQLKLHIYYV*FLSIGCQLVSKEDI
Trigger: AATGTCTTCCTTAGAAACTAATTGGCAACCGATGGATAAAAACAAAACATAGTAAATGTGCAGTTTGAGCTGAACTGCAGAATGCACGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421334.1
CDS CAA 90 bp TTATTGAGCTGTTCAGTAAGAAAACCGCCTATTTGTTCATCTTTATaGTCTTCACTAATCTTGCTTGGCGTGTCTTGTAGTTGCTTGAGA +
Preference number: 6 (lower is better)
Translates to: LLSCSVRKPPICSSL*SSLILLGVSCSCLR
Trigger: TCTCAAGCAACTACAAGACACGCCAAGCAAGATTAGTGAAGACAATAAAGATGAACAAATAGGCGGTTTTCTTACTGAACAGCTCAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000438804.5
ENST00000617388.4
CDS GCA 72 bp CAGAGACCCATAGTTTATAACAGCTTTTATGCTGTGTaGATCAAGATCATCTATTACACGAAAAATGATTCC +
Preference number: 6 (lower is better)
Translates to: QRPIVYNSFYAV*IKIIYYTKNDS
Trigger: GGAATCATTTTTCGTGTAATAGATGATCTTGATGCACACAGCATAAAAGCTGTTATAAACTATGGGTCTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432273.5
ENST00000454326.5
CDS CCA 72 bp TCATTTTCTTCCTCTGATATAACATTGAGTCTTAGCTaGTATTTCTCGATTATCTTCAGAAGTTCAGTGCAT +
Preference number: 6 (lower is better)
Translates to: SFSSSDITLSLS*YFSIIFRSSVH
Trigger: ATGCACTGAACTTCTGAAGATAATCGAGAAATACCAGCTAAGACTCAATGTTATATCAGAGGAAGAAAATGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000358299.7
ENST00000392237.6
ENST00000412210.5
ENST00000416760.5
ENST00000419460.5
ENST00000425178.5
ENST00000432273.5
ENST00000435143.5
ENST00000437978.5
ENST00000438804.5
ENST00000441547.5
ENST00000450143.5
ENST00000454326.5
ENST00000457524.5
ENST00000617388.4