RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ICA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000003147

Ensembl transcript IDs: ENST00000265577.11, ENST00000317367.9, ENST00000339809.10, ENST00000396675.7, ENST00000401396.5, ENST00000402384.8, ENST00000406470.6, ENST00000407906.5, ENST00000422063.6, ENST00000430867.5, ENST00000446305.1, ENST00000447326.5, ENST00000455539.5, ENST00000457755.5, ENST00000470696.1, ENST00000476942.1, ENST00000490041.1, ENST00000650486.1

Found 580 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCAGCTCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTaGTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAG +
Preference number: 1 (lower is better)
Translates to: PSSSTSVRTRGPPGT*CGDSVFGWPELHPE
Trigger: CTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR CCA 90 bp GAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTaGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTTGG +
Preference number: 1 (lower is better)
Translates to: ENTWPTRHLLWGQCL*LARASSRAHWKVAW
Trigger: CCAAGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR CCA 90 bp CTCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTaGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCAC +
Preference number: 1 (lower is better)
Translates to: LLHQCENTWPTRHLL*GQCLWLARASSRAH
Trigger: GTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR CCA 90 bp CTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTTaGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGAC +
Preference number: 1 (lower is better)
Translates to: LWLARASSRAHWKVA*QEEGIFLQPSSKGD
Trigger: GTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR TCA 90 bp TTTCAACTTGGATCTCACGGTAGCCCAGTGACACCGCAGCAGCCATaGTGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAACCGCTTCTA +
Preference number: 1 (lower is better)
Translates to: FQLGSHGSPVTPQQP*WDVGRRAVAWKPLL
Trigger: TAGAAGCGGTTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGCTGCTGCGGTGTCACTGGGCTACCGTGAGATCCAAGTTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR CCA 90 bp AGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTaGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGG +
Preference number: 1 (lower is better)
Translates to: SVFGWPELHPELTGR*LGRKRESSYSPPPR
Trigger: CCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR TCA 90 bp TTCCGTCCTGCACTGTTCCATGCGGTTCACCGTCAGCCAAGTATCTaGGATGGCCCGATGCCGAAAAGTCTCCACTTCTTGGTGAAATCG +
Preference number: 1 (lower is better)
Translates to: FRPALFHAVHRQPSI*DGPMPKSLHFLVKS
Trigger: CGATTTCACCAAGAAGTGGAGACTTTTCGGCATCGGGCCATCTCAGATACTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGACGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR GCA 90 bp TGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATaGATTGAGCAATTCGTGTTCTTTATCGGTTTTCCCAACAGCATC +
Preference number: 1 (lower is better)
Translates to: CWGRHVSALPKGTDS*IEQFVFFIGFPNSI
Trigger: GATGCTGTTGGGAAAACCGATAAAGAACACGAATTGCTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
3UTR CCA 90 bp TGGTATCTGCAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTaGACAGAAGCCCAGCTCCTCCACCAGTGTGAGAACACGTGGCCC +
Preference number: 1 (lower is better)
Translates to: WYLQIWLLSIVRFVP*TEAQLLHQCENTWP
Trigger: GGGCCACGTGTTCTCACACTGGTGGAGGAGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTGCAGATACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR CCA 90 bp TCCTGCACTGTTCCATGCGGTTCACCGTCAGCCAAGTATCTGAGATaGCCCGATGCCGAAAAGTCTCCACTTCTTGGTGAAATCGACACA +
Preference number: 1 (lower is better)
Translates to: SCTVPCGSPSAKYLR*PDAEKSPLLGEIDT
Trigger: TGTGTCGATTTCACCAAGAAGTGGAGACTTTTCGGCATCGGGCCATCTCAGATACTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR GCA 90 bp TCATCCATAATAGTGCTCCTCTATATTCCGTCCTGCACTGTTCCATaGGGTTCACCGTCAGCCAAGTATCTGAGATGGCCCGATGCCGAA +
Preference number: 1 (lower is better)
Translates to: SSIIVLLYIPSCTVP*GSPSAKYLRWPDAE
Trigger: TTCGGCATCGGGCCATCTCAGATACTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGACGGAATATAGAGGAGCACTATTATGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR GCA 90 bp GAGACACGTCCTTCATCCATAATAGTGCTCCTCTATATTCCGTCCTaGACTGTTCCATGCGGTTCACCGTCAGCCAAGTATCTGAGATGG +
Preference number: 1 (lower is better)
Translates to: ETRPSSIIVLLYIPS*TVPCGSPSAKYLRW
Trigger: CCATCTCAGATACTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGACGGAATATAGAGGAGCACTATTATGGATGAAGGACGTGTCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR GCA 90 bp GCCAACCTTTGCTGGGAAGAAAAGCAGAGGGCCTTTCCTGTCGCTTaGATCATCTTTCCTGCTCTGGTTTTATCTTGGAAACCTTGGGAT +
Preference number: 1 (lower is better)
Translates to: ANLCWEEKQRAFPVA*IIFPALVLSWKPWD
Trigger: ATCCCAAGGTTTCCAAGATAAAACCAGAGCAGGAAAGATGATGCAAGCGACAGGAAAGGCCCTCTGCTTTTCTTCCCAGCAAAGGTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR CCA 90 bp TCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATaGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAG +
Preference number: 1 (lower is better)
Translates to: SSHEEDKRRQWYLQI*LLSIVRFVPWTEAQ
Trigger: CTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR TCA 90 bp TGGAAACCTTGGGATCGAAGAAATTTTCCCAGTTCGTTTTCTTCTTaGGACAAGACTTCTGTCGCCCAGGCTGGAGCACAACGGCTCATT +
Preference number: 1 (lower is better)
Translates to: WKPWDRRNFPSSFSS*DKTSVAQAGAQRLI
Trigger: AATGAGCCGTTGTGCTCCAGCCTGGGCGACAGAAGTCTTGTCTCAAGAAGAAAACGAACTGGGAAAATTTCTTCGATCCCAAGGTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR TCA 90 bp CAAGTATCTGAGATGGCCCGATGCCGAAAAGTCTCCACTTCTTGGTaGAATCGACACAAAGGATTTCGTAAGGCCAACCTTTGCTGGGAA +
Preference number: 1 (lower is better)
Translates to: QVSEMARCRKVSTSW*NRHKGFRKANLCWE
Trigger: TTCCCAGCAAAGGTTGGCCTTACGAAATCCTTTGTGTCGATTTCACCAAGAAGTGGAGACTTTTCGGCATCGGGCCATCTCAGATACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR CCA 90 bp TACATGCTTTTGAATTCCAGCCACGAAGAGGACAAAAGGAGACAGTaGTATCTGCAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCT +
Preference number: 1 (lower is better)
Translates to: YMLLNSSHEEDKRRQ*YLQIWLLSIVRFVP
Trigger: AGGCACAAACCTTACTATGGAAAGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAATTCAAAAGCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR TCA 90 bp GAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGGCTGGGGGCGGCATGTaGGTGCCCTCCCGAAGGGTA +
Preference number: 2 (lower is better)
Translates to: EHVAHQAPAVGTVSLVGQAGGGM*VPSRRV
Trigger: TACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGC...CTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR TCA 90 bp AGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTGCTGGGGGCGGCATGTaGGTGCCCTCCCGAAGGGTA +
Preference number: 2 (lower is better)
Translates to: SVRTRGPPGTCCGDSVFGAGGGM*VPSRRV
Trigger: TACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGC...ACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR TCA 90 bp CAGAAGCCCAGCTCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCCTCACGGTAGCCCAGTaGCACCGCAGCAGCCATGAT +
Preference number: 2 (lower is better)
Translates to: QKPSSSTSVRTRGPPGTCLTVAQ*HRSSHD
Trigger: ATCATGGCTGCTGCGGTGTCACTGGGCTACCGTGAG...GCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGCTGGGCTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR GCA 90 bp GAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCGGGGCGGCATGTGAGTaGCCTCCCGAAGGGTACAGA +
Preference number: 2 (lower is better)
Translates to: ENTWPTRHLLWGQCLWLAGAACE*PPEGYR
Trigger: TCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCC...GGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR TCA 90 bp GAGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTGCTGGGGGCGGCATGTaGGTGCCCTCCCGAAGGGTA +
Preference number: 2 (lower is better)
Translates to: ELTGRWLGRKRESSYSPPAGGGM*VPSRRV
Trigger: TACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGC...AGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR TCA 90 bp CACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCACACCGCAGCAGCCATaGTGGGATGTAGGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: HVAHQAPAVGTVSLVGQSTPQQP*WDVGRR
Trigger: TCTCCTGCCTACATCCCATCATGGCTGCTGCGGTGT...GCTCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR TCA 90 bp TCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTCTCACGGTAGCCCAGTaGCACCGCAGCAGCCATGAT +
Preference number: 2 (lower is better)
Translates to: SSTSVRTRGPPGTCCGDSLTVAQ*HRSSHD
Trigger: ATCATGGCTGCTGCGGTGTCACTGGGCTACCGTGAG...ACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR GCA 90 bp GAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATGGGGCGGCATGTGAGTaGCCTCCCGAAGGGTACAGA +
Preference number: 2 (lower is better)
Translates to: ELLGAACECPPEGYRFMHGAACE*PPEGYR
Trigger: TCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCC...ATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
3UTR-3UTR CCA 90 bp GGGAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCAAACCTGAGCCTGTCTaGGCCTTGGGGTCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: GSCWGRHVSALPKGTDSCKPEPV*ALGSGS
Trigger: AGAGCCAGACCCCAAGGCCCAGACAGGCTCAGGTTT...GCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
3UTR-3UTR TCA 90 bp GGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTGCTGGGGGCGGCATGTaGGTGCCCTCCCGAAGGGTA +
Preference number: 2 (lower is better)
Translates to: GQCLWLARASSRAHWKVAAGGGM*VPSRRV
Trigger: TACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGC...AGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR TCA 90 bp GAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCACACCGCAGCAGCCATaGTGGGATGTAGGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: ENTWPTRHLLWGQCLWLATPQQP*WDVGRR
Trigger: TCTCCTGCCTACATCCCATCATGGCTGCTGCGGTGT...GGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR GCA 90 bp AGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTGGGGCGGCATGTGAGTaGCCTCCCGAAGGGTACAGA +
Preference number: 2 (lower is better)
Translates to: SVRTRGPPGTCCGDSVFGGAACE*PPEGYR
Trigger: TCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCC...ACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CCA 90 bp CTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGGCCCTGGGCCTTGGGGTCTaGCTCTCCCAGGGCCATAGT +
Preference number: 2 (lower is better)
Translates to: LNQAVRSEAALAGSCSEALGLGV*LSQGHS
Trigger: ACTATGGCCCTGGGAGAGCCAGACCCCAAGGCCCAG...GGCCTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
3UTR-3UTR TCA 90 bp GTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGACTCACGGTAGCCCAGTaGCACCGCAGCAGCCATGAT +
Preference number: 2 (lower is better)
Translates to: VAWQEEGIFLQPSSKGDRLTVAQ*HRSSHD
Trigger: ATCATGGCTGCTGCGGTGTCACTGGGCTACCGTGAG...TCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR GCA 90 bp CTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAGGGGCGGCATGTGAGTaGCCTCCCGAAGGGTACAGA +
Preference number: 2 (lower is better)
Translates to: LTGRWLGRKRESSYSPPPGAACE*PPEGYR
Trigger: TCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCC...TGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CCA 90 bp CAGAAGCCCAGCTCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTCATCCAGAGCTCACTaGAAGGTGGCTTGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: QKPSSSTSVRTRGPPGTCSSRAH*KVAWQE
Trigger: TTCCTGCCAAGCCACCTTCCAGTGAGCTCTGGATGA...GCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGCTGGGCTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CCA 90 bp CTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGGCCGGCCATAGTGGGCACTaGCTCCTTCACTTGGCCGTC +
Preference number: 2 (lower is better)
Translates to: LNQAVRSEAALAGSCSEAGHSGH*LLHLAV
Trigger: GACGGCCAAGTGAAGGAGCCAGTGCCCACTATGGCC...GGCCTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
3UTR-3UTR CCA 90 bp AGGCTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGCTGGGCCTTGGGGTCTaGCTCTCCCAGGGCCATAGT +
Preference number: 2 (lower is better)
Translates to: RLNQAVRSEAALAGSCSELGLGV*LSQGHS
Trigger: ACTATGGCCCTGGGAGAGCCAGACCCCAAGGCCCAG...CTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
3UTR-3UTR TCA 90 bp CTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGACACCGCAGCAGCCATaGTGGGATGTAGGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: LEGGLAGRGNLPTALLQGTPQQP*WDVGRR
Trigger: TCTCCTGCCTACATCCCATCATGGCTGCTGCGGTGT...CCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR TCA 90 bp GAGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCTCACGGTAGCCCAGTaGCACCGCAGCAGCCATGAT +
Preference number: 2 (lower is better)
Translates to: ELTGRWLGRKRESSYSPPLTVAQ*HRSSHD
Trigger: ATCATGGCTGCTGCGGTGTCACTGGGCTACCGTGAG...AGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR TCA 90 bp AGGCTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGCGGCCCACTCTTTGCTaGACTCGCCCTCTTCCAAGG +
Preference number: 2 (lower is better)
Translates to: RLNQAVRSEAALAGSCSERPTLC*TRPLPR
Trigger: CCTTGGAAGAGGGCGAGTTCAGCAAAGAGTGGGCCG...CTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
3UTR-3UTR GCA 90 bp GGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTGGGGCGGCATGTGAGTaGCCTCCCGAAGGGTACAGA +
Preference number: 2 (lower is better)
Translates to: GQCLWLARASSRAHWKVAGAACE*PPEGYR
Trigger: TCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCC...AGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CCA 90 bp GAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGCACTGGAAGGTGGCTTaGCAGGAAGAGGGAATCTTC +
Preference number: 2 (lower is better)
Translates to: EHVAHQAPAVGTVSLVGQHWKVA*QEEGIF
Trigger: GAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTG...CTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR TCA 90 bp GGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTCTCACGGTAGCCCAGTaGCACCGCAGCAGCCATGAT +
Preference number: 2 (lower is better)
Translates to: GQCLWLARASSRAHWKVALTVAQ*HRSSHD
Trigger: ATCATGGCTGCTGCGGTGTCACTGGGCTACCGTGAG...AGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR GCA 90 bp TGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGTCCTGCACTGTTCCATaGGGTTCACCGTCAGCCAAG +
Preference number: 2 (lower is better)
Translates to: CWGRHVSALPKGTDSCIESCTVP*GSPSAK
Trigger: CTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGA...CTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR-3UTR GCA 90 bp GGGAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCCTCTATATTCCGTCCTaGACTGTTCCATGCGGTTCA +
Preference number: 2 (lower is better)
Translates to: GSCWGRHVSALPKGTDSCLYIPS*TVPCGS
Trigger: TGAACCGCATGGAACAGTGCAGGACGGAATATAGAG...GCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR-3UTR CCA 90 bp GGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGAGGAGAGCGGTGGCCTaGAAACCGCTTCTAGACAAT +
Preference number: 2 (lower is better)
Translates to: GRWLGRKRESSYSPPPRGRRAVA*KPLLDN
Trigger: ATTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCT...CCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR TCA 90 bp GCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAACACCGCAGCAGCCATaGTGGGATGTAGGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: AVGTVSLVGQSFIQSSLETPQQP*WDVGRR
Trigger: TCTCCTGCCTACATCCCATCATGGCTGCTGCGGTGT...TTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR TCA 90 bp GACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTTGCCTCCTGCTGCCTCTaGGGCTGTAGGACACGTCAT +
Preference number: 2 (lower is better)
Translates to: DSVFGWPELHPELTGRWLASCCL*GCRTRH
Trigger: ATGACGTGTCCTACAGCCTCAGAGGCAGCAGGAGGC...AAGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
3UTR-3UTR TCA 90 bp TGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGAACAGCATCAGGATTTaGGAGTGGGTCGAGGTCAGC +
Preference number: 2 (lower is better)
Translates to: CWGRHVSALPKGTDSCIENSIRI*EWVEVS
Trigger: GCTGACCTCGACCCACTCTCAAATCCTGATGCTGTT...CTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
3UTR-3UTR TCA 90 bp CTCCTCTATATTCCGTCCTGCACTGTTCCATGCGGTTCACCGTCAGCCAAGTATCCTGCCTCAGCCTCCTaGGTAGCTGGGACTGCACAT +
Preference number: 2 (lower is better)
Translates to: LLYIPSCTVPCGSPSAKYPASAS*VAGTAH
Trigger: ATGTGCAGTCCCAGCTACTCAGGAGGCTGAGGCAGG...ATACTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGACGGAATATAGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR-3UTR TCA 90 bp AGGCTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGCATTATAGGTCACTGTaGTCCTCCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: RLNQAVRSEAALAGSCSEHYRSL*SSCLSL
Trigger: GAGGCTGAGGCAGGAGGATCACAGTGACCTATAATG...CTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAGCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR-3UTR TCA 90 bp TGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGTCTGGATCAAGCTCCTaGGACACGTCCTTCATCCAT +
Preference number: 2 (lower is better)
Translates to: CWGRHVSALPKGTDSCIESGSSS*DTSFIH
Trigger: ATGGATGAAGGACGTGTCTCAGGAGCTTGATCCAGA...CTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR-3UTR CCA 90 bp TGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGGCCAAGTATCTGAGATaGCCCGATGCCGAAAAGTCT +
Preference number: 2 (lower is better)
Translates to: CWGRHVSALPKGTDSCIEAKYLR*PDAEKS
Trigger: AGACTTTTCGGCATCGGGCCATCTCAGATACTTGGC...CTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR-3UTR TCA 90 bp TATCGGTTTTCCCAACAGCATCAGGATTTGAGAGTGGGTCGAGGTCAGCGAAGACCAGGCAGTCAGGTCTaGGGCAGCCTTAGCAGGTTC +
Preference number: 2 (lower is better)
Translates to: YRFSQQHQDLRVGRGQRRPGSQV*GSLSRF
Trigger: GAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGG...TCTTCGCTGACCTCGACCCACTCTCAAATCCTGATGCTGTTGGGAAAACCGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
3UTR-3UTR CCA 90 bp GGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTAGGAGAGCGGTGGCCTaGAAACCGCTTCTAGACAAT +
Preference number: 2 (lower is better)
Translates to: GQCLWLARASSRAHWKVARRAVA*KPLLDN
Trigger: ATTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCT...AGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR TCA 90 bp AAGTCTTTCATATTTTGGTCTAAAAGCTGCGAAGGAAGGAAACCTGAGCCTGTCGCTGGGGGCGGCATGTaGGTGCCCTCCCGAAGGGTA +
Preference number: 2 (lower is better)
Translates to: KSFIFWSKSCEGRKPEPVAGGGM*VPSRRV
Trigger: TACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGC...GACAGGCTCAGGTTTCCTTCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
3UTR-3UTR TCA 90 bp TGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGTTCATCTATGGGTCCTaGGCATGCAGTATGTGTAGA +
Preference number: 2 (lower is better)
Translates to: CWGRHVSALPKGTDSCIEFIYGS*ACSMCR
Trigger: TCTACACATACTGCATGCTCAGGACCCATAGATGAA...CTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR-3UTR CCA 90 bp TATCGGTTTTCCCAACAGCATCAGGATTTGAGAGTGGGTCGAGGTCAGCGAAGAAAACCTGAGCCTGTCTaGGCCTTGGGGTCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: YRFSQQHQDLRVGRGQRRKPEPV*ALGSGS
Trigger: AGAGCCAGACCCCAAGGCCCAGACAGGCTCAGGTTT...TCTTCGCTGACCTCGACCCACTCTCAAATCCTGATGCTGTTGGGAAAACCGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
3UTR-3UTR TCA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAATCAAAGTAGGCTTCTaGTTTCAACTTGGATCTCAC +
Preference number: 2 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARIKVGF*FQLGSH
Trigger: GTGAGATCCAAGTTGAAATCAGAAGCCTACTTTGAT...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR TCA 90 bp GCCTTTCCTGTCGCTTGCATCATCTTTCCTGCTCTGGTTTTATCTTGGAAACCTCGGCCCACTCTTTGCTaGACTCGCCCTCTTCCAAGG +
Preference number: 2 (lower is better)
Translates to: AFPVACIIFPALVLSWKPRPTLC*TRPLPR
Trigger: CCTTGGAAGAGGGCGAGTTCAGCAAAGAGTGGGCCG...AGGTTTCCAAGATAAAACCAGAGCAGGAAAGATGATGCAAGCGACAGGAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR-3UTR CCA 90 bp TATCGGTTTTCCCAACAGCATCAGGATTTGAGAGTGGGTCGAGGTCAGCGAAGAACTGGCTCCTTCACTTaGCCGTCTCCAAACACAGCG +
Preference number: 2 (lower is better)
Translates to: YRFSQQHQDLRVGRGQRRTGSFT*PSPNTA
Trigger: CGCTGTGTTTGGAGACGGCCAAGTGAAGGAGCCAGT...TCTTCGCTGACCTCGACCCACTCTCAAATCCTGATGCTGTTGGGAAAACCGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
3UTR-3UTR TCA 90 bp GTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAATCAAAGTAGGCTTCTaGTTTCAACTTGGATCTCAC +
Preference number: 2 (lower is better)
Translates to: VAWQEEGIFLQPSSKGDRIKVGF*FQLGSH
Trigger: GTGAGATCCAAGTTGAAATCAGAAGCCTACTTTGAT...TCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CCA 90 bp CAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTCGAGCTCACTGGAAGGTaGCTTGGCAGGAAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: QIWLLSIVRFVPWTEAQLELTGR*LGRKRE
Trigger: TTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTC...GAGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CCA 90 bp TACATGCTTTTGAATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAGTGTGAGAACACGTaGCCCACCAGGCACCTGCTG +
Preference number: 2 (lower is better)
Translates to: YMLLNSSHEEDKRRQWYLQCENT*PTRHLL
Trigger: CAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTG...CAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAATTCAAAAGCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CCA 90 bp GTCCTGCACTGTTCCATGCGGTTCACCGTCAGCCAAGTATCTGAGATGGCCCGAGCTCTGGTTTTATCTTaGAAACCTTGGGATCGAAGA +
Preference number: 2 (lower is better)
Translates to: VLHCSMRFTVSQVSEMARALVLS*KPWDRR
Trigger: TCTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGC...TCGGGCCATCTCAGATACTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR-3UTR CCA 90 bp GCAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTAGGAGAGCGGTGGCCTaGAAACCGCTTCTAGACAAT +
Preference number: 2 (lower is better)
Translates to: ANMAAFHSKVCALDRSPARRAVA*KPLLDN
Trigger: ATTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCT...AGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CCA 90 bp GCAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTTCATCCAGAGCTCACTaGAAGGTGGCTTGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: ANMAAFHSKVCALDRSPASSRAH*KVAWQE
Trigger: TTCCTGCCAAGCCACCTTCCAGTGAGCTCTGGATGA...AGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CCA 90 bp AAGTCTTTCATATTTTGGTCTAAAAGCTGCGAAGGAAGGAAACCTGAGCCTGTCGGCCATAGTGGGCACTaGCTCCTTCACTTGGCCGTC +
Preference number: 2 (lower is better)
Translates to: KSFIFWSKSCEGRKPEPVGHSGH*LLHLAV
Trigger: GACGGCCAAGTGAAGGAGCCAGTGCCCACTATGGCC...GACAGGCTCAGGTTTCCTTCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
3UTR-3UTR CCA 90 bp CGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTTTCCATAGTGAGCTCACTGGAAGGTaGCTTGGCAGGAAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: RRGQKETVVSANMAAFHSELTGR*LGRKRE
Trigger: TTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTC...ACTATGGAAAGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CCA 90 bp GCCTTTCCTGTCGCTTGCATCATCTTTCCTGCTCTGGTTTTATCTTGGAAACCTTTCTGTCGCCCAGGCTaGAGCACAACGGCTCATTAT +
Preference number: 2 (lower is better)
Translates to: AFPVACIIFPALVLSWKPFCRPG*STTAHY
Trigger: ATAATGAGCCGTTGTGCTCCAGCCTGGGCGACAGAA...AGGTTTCCAAGATAAAACCAGAGCAGGAAAGATGATGCAAGCGACAGGAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR-3UTR CCA 90 bp CGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTTTCCATAGTAGGAGAGCGGTGGCCTaGAAACCGCTTCTAGACAAT +
Preference number: 2 (lower is better)
Translates to: RRGQKETVVSANMAAFHSRRAVA*KPLLDN
Trigger: ATTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCT...ACTATGGAAAGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CCA 90 bp TACATGCTTTTGAATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGAGGAGAGCGGTGGCCTaGAAACCGCTTCTAGACAAT +
Preference number: 2 (lower is better)
Translates to: YMLLNSSHEEDKRRQWYLRRAVA*KPLLDN
Trigger: ATTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCT...CAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAATTCAAAAGCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CCA 90 bp CGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTTTCCATAGTCACTGGAAGGTGGCTTaGCAGGAAGAGGGAATCTTC +
Preference number: 2 (lower is better)
Translates to: RRGQKETVVSANMAAFHSHWKVA*QEEGIF
Trigger: GAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTG...ACTATGGAAAGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CCA 90 bp TACATGCTTTTGAATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGTCATCCAGAGCTCACTaGAAGGTGGCTTGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: YMLLNSSHEEDKRRQWYLSSRAH*KVAWQE
Trigger: TTCCTGCCAAGCCACCTTCCAGTGAGCTCTGGATGA...CAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAATTCAAAAGCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CCA 90 bp TACATGCTTTTGAATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGTGGGGACAGTGTCTTTaGTTGGCCAGAGCTTCATCC +
Preference number: 2 (lower is better)
Translates to: YMLLNSSHEEDKRRQWYLWGQCL*LARASS
Trigger: GGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCA...CAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAATTCAAAAGCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CCA 90 bp AAGTCTTTCATATTTTGGTCTAAAAGCTGCGAAGGAAGGAAACCTGAGCCTGTCACTGGCTCCTTCACTTaGCCGTCTCCAAACACAGCG +
Preference number: 2 (lower is better)
Translates to: KSFIFWSKSCEGRKPEPVTGSFT*PSPNTA
Trigger: CGCTGTGTTTGGAGACGGCCAAGTGAAGGAGCCAGT...GACAGGCTCAGGTTTCCTTCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
3UTR-3UTR CCA 90 bp AAGTCTTTCATATTTTGGTCTAAAAGCTGCGAAGGAAGGAAACCTGAGCCTGTCCTGGTCTCAAACTCCTaGCTCCAAGTGATCCTCCTG +
Preference number: 2 (lower is better)
Translates to: KSFIFWSKSCEGRKPEPVLVSNS*LQVILL
Trigger: CAGGAGGATCACTTGGAGCCAGGAGTTTGAGACCAG...GACAGGCTCAGGTTTCCTTCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR-3UTR TCA 90 bp GCAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTATCAAAGTAGGCTTCTaGTTTCAACTTGGATCTCAC +
Preference number: 2 (lower is better)
Translates to: ANMAAFHSKVCALDRSPAIKVGF*FQLGSH
Trigger: GTGAGATCCAAGTTGAAATCAGAAGCCTACTTTGAT...AGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CCA 90 bp TATCGGTTTTCCCAACAGCATCAGGATTTGAGAGTGGGTCGAGGTCAGCGAAGAAAGTCTTTCATATTTTaGTCTAAAAGCTGCGAAGGA +
Preference number: 2 (lower is better)
Translates to: YRFSQQHQDLRVGRGQRRKSFIF*SKSCEG
Trigger: TCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTT...TCTTCGCTGACCTCGACCCACTCTCAAATCCTGATGCTGTTGGGAAAACCGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
3UTR TCA 72 bp TGTGCCTTGGACAGAAGCCCAGCTCCTCCACCAGTGTaGGAACACGTGGCCCACCAGGCACCTGCTGTGGGG +
Preference number: 3 (lower is better)
Translates to: CALDRSPAPPPV*EHVAHQAPAVG
Trigger: CCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGCTGGGCTTCTGTCCAAGGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CAA 90 bp GGGAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCACAGCGGCCCACTCTTaGCTGAACTCGCCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: GSCWGRHVSALPKGTDSCTAAHS*LNSPSS
Trigger: GGAAGAGGGCGAGTTCAGCAAAGAGTGGGCCGCTGT...GCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
3UTR TCA 72 bp GGATCTCACGGTAGCCCAGTGACACCGCAGCAGCCATaGTGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAA +
Preference number: 3 (lower is better)
Translates to: GSHGSPVTPQQP*WDVGRRAVAWK
Trigger: TTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGCTGCTGCGGTGTCACTGGGCTACCGTGAGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CAA 90 bp GGGAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCAGCAGCAGGTCATCTTaGTCAGCACCTTCAGGTTCC +
Preference number: 3 (lower is better)
Translates to: GSCWGRHVSALPKGTDSCSSRSS*SAPSGS
Trigger: GGAACCTGAAGGTGCTGACAAAGATGACCTGCTGCT...GCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR GCA 72 bp TCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTaGTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTT +
Preference number: 3 (lower is better)
Translates to: STSVRTRGPPGT*CGDSVFGWPEL
Trigger: AAGCTCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR CCA 72 bp CAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTaGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCC +
Preference number: 3 (lower is better)
Translates to: QCENTWPTRHLL*GQCLWLARASS
Trigger: GGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR CCA 72 bp GCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTTaGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCC +
Preference number: 3 (lower is better)
Translates to: ARASSRAHWKVA*QEEGIFLQPSS
Trigger: GGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR CCA 72 bp GGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTaGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCT +
Preference number: 3 (lower is better)
Translates to: GWPELHPELTGR*LGRKRESSYSP
Trigger: AGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CAA 90 bp TATCGGTTTTCCCAACAGCATCAGGATTTGAGAGTGGGTCGAGGTCAGCGAAGAACAGCGGCCCACTCTTaGCTGAACTCGCCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: YRFSQQHQDLRVGRGQRRTAAHS*LNSPSS
Trigger: GGAAGAGGGCGAGTTCAGCAAAGAGTGGGCCGCTGT...TCTTCGCTGACCTCGACCCACTCTCAAATCCTGATGCTGTTGGGAAAACCGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
3UTR TCA 72 bp GCACTGTTCCATGCGGTTCACCGTCAGCCAAGTATCTaGGATGGCCCGATGCCGAAAAGTCTCCACTTCTTG +
Preference number: 3 (lower is better)
Translates to: ALFHAVHRQPSI*DGPMPKSLHFL
Trigger: CAAGAAGTGGAGACTTTTCGGCATCGGGCCATCTCAGATACTTGGCTGACGGTGAACCGCATGGAACAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR-3UTR CAA 90 bp TGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGGCTTCTGATTTCAACTaGGATCTCACGGTAGCCCAG +
Preference number: 3 (lower is better)
Translates to: CGDSVFGWPELHPELTGRASDFN*DLTVAQ
Trigger: CTGGGCTACCGTGAGATCCAAGTTGAAATCAGAAGC...CCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR GCA 72 bp ATAGTGCTCCTCTATATTCCGTCCTGCACTGTTCCATaGGGTTCACCGTCAGCCAAGTATCTGAGATGGCCC +
Preference number: 3 (lower is better)
Translates to: IVLLYIPSCTVP*GSPSAKYLRWP
Trigger: GGGCCATCTCAGATACTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGACGGAATATAGAGGAGCACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR CCA 72 bp GTTCCATGCGGTTCACCGTCAGCCAAGTATCTGAGATaGCCCGATGCCGAAAAGTCTCCACTTCTTGGTGAA +
Preference number: 3 (lower is better)
Translates to: VPCGSPSAKYLR*PDAEKSPLLGE
Trigger: TTCACCAAGAAGTGGAGACTTTTCGGCATCGGGCCATCTCAGATACTTGGCTGACGGTGAACCGCATGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR-3UTR CAA 90 bp CTCCTCTATATTCCGTCCTGCACTGTTCCATGCGGTTCACCGTCAGCCAAGTATCAACAGCATCAGGATTaGAGAGTGGGTCGAGGTCAG +
Preference number: 3 (lower is better)
Translates to: LLYIPSCTVPCGSPSAKYQQHQD*RVGRGQ
Trigger: CTGACCTCGACCCACTCTCAAATCCTGATGCTGTTG...ATACTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGACGGAATATAGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR-3UTR CAA 90 bp CAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTCGTGGGGACAGTGTCTTaGGTTGGCCAGAGCTTCATC +
Preference number: 3 (lower is better)
Translates to: QIWLLSIVRFVPWTEAQLVGTVS*VGQSFI
Trigger: GATGAAGCTCTGGCCAACCAAAGACACTGTCCCCAC...GAGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CAA 90 bp CGCTTGCATCATCTTTCCTGCTCTGGTTTTATCTTGGAAACCTTGGGATCGAAGCACTGGCTCCTTCACTaGGCCGTCTCCAAACACAGC +
Preference number: 3 (lower is better)
Translates to: RLHHLSCSGFILETLGSKHWLLH*AVSKHS
Trigger: GCTGTGTTTGGAGACGGCCAAGTGAAGGAGCCAGTG...CTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGCAGGAAAGATGATGCAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR-3UTR CAA 90 bp GCAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTGGACAGTGTCTTTGGTaGGCCAGAGCTTCATCCAGA +
Preference number: 3 (lower is better)
Translates to: ANMAAFHSKVCALDRSPAGQCLW*ARASSR
Trigger: TCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC...AGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CAA 90 bp TGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGGTACAGATTCATGCATaGAGCAATTCGTGTTCTTTA +
Preference number: 3 (lower is better)
Translates to: CWGRHVSALPKGTDSCIEVQIHA*SNSCSL
Trigger: TAAAGAACACGAATTGCTCAATGCATGAATCTGTAC...CTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
3UTR GCA 72 bp CGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATaGATTGAGCAATTCGTGTTCTTTATCGGTTTTCCC +
Preference number: 3 (lower is better)
Translates to: RHVSALPKGTDS*IEQFVFFIGFP
Trigger: GGGAAAACCGATAAAGAACACGAATTGCTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
3UTR-3UTR CAA 90 bp TTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTGCTTCTGATTTCAACTaGGATCTCACGGTAGCCCAG +
Preference number: 3 (lower is better)
Translates to: FQPRRGQKETVVSANMAAASDFN*DLTVAQ
Trigger: CTGGGCTACCGTGAGATCCAAGTTGAAATCAGAAGC...AGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CAA 90 bp TACATGCTTTTGAATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGGTGGGGACAGTGTCTTaGGTTGGCCAGAGCTTCATC +
Preference number: 3 (lower is better)
Translates to: YMLLNSSHEEDKRRQWYLVGTVS*VGQSFI
Trigger: GATGAAGCTCTGGCCAACCAAAGACACTGTCCCCAC...CAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAATTCAAAAGCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CAA 90 bp AAGTCTTTCATATTTTGGTCTAAAAGCTGCGAAGGAAGGAAACCTGAGCCTGTCCACTGGCTCCTTCACTaGGCCGTCTCCAAACACAGC +
Preference number: 3 (lower is better)
Translates to: KSFIFWSKSCEGRKPEPVHWLLH*AVSKHS
Trigger: GCTGTGTTTGGAGACGGCCAAGTGAAGGAGCCAGTG...GACAGGCTCAGGTTTCCTTCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
3UTR TCA 72 bp GAGATGGCCCGATGCCGAAAAGTCTCCACTTCTTGGTaGAATCGACACAAAGGATTTCGTAAGGCCAACCTT +
Preference number: 3 (lower is better)
Translates to: EMARCRKVSTSW*NRHKGFRKANL
Trigger: AAGGTTGGCCTTACGAAATCCTTTGTGTCGATTTCACCAAGAAGTGGAGACTTTTCGGCATCGGGCCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR GCA 72 bp CCTTCATCCATAATAGTGCTCCTCTATATTCCGTCCTaGACTGTTCCATGCGGTTCACCGTCAGCCAAGTAT +
Preference number: 3 (lower is better)
Translates to: PSSIIVLLYIPS*TVPCGSPSAKY
Trigger: ATACTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGACGGAATATAGAGGAGCACTATTATGGATGAAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR-3UTR CAA 90 bp CTCCTCTATATTCCGTCCTGCACTGTTCCATGCGGTTCACCGTCAGCCAAGTATAAAAGTCTCCACTTCTaGGTGAAATCGACACAAAGG +
Preference number: 3 (lower is better)
Translates to: LLYIPSCTVPCGSPSAKYKSLHF*VKSTQR
Trigger: CCTTTGTGTCGATTTCACCAAGAAGTGGAGACTTTT...ATACTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGACGGAATATAGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR GCA 72 bp TGCTGGGAAGAAAAGCAGAGGGCCTTTCCTGTCGCTTaGATCATCTTTCCTGCTCTGGTTTTATCTTGGAAA +
Preference number: 3 (lower is better)
Translates to: CWEEKQRAFPVA*IIFPALVLSWK
Trigger: TTTCCAAGATAAAACCAGAGCAGGAAAGATGATGCAAGCGACAGGAAAGGCCCTCTGCTTTTCTTCCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455539.5
3UTR TCA 72 bp GACACGTCATTCAAACCTACCATCAAAGTAGGCTTCTaGTTTCAACTTGGATCTCACGGTAGCCCAGTGACA +
Preference number: 3 (lower is better)
Translates to: DTSFKPTIKVGF*FQLGSHGSPVT
Trigger: TGTCACTGGGCTACCGTGAGATCCAAGTTGAAATCAGAAGCCTACTTTGATGGTAGGTTTGAATGACGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
3UTR CCA 72 bp GAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATaGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACA +
Preference number: 3 (lower is better)
Translates to: EEDKRRQWYLQI*LLSIVRFVPWT
Trigger: TGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
3UTR-3UTR CAA 90 bp GATGGCCCGATGCCGAAAAGTCTCCACTTCTTGGTGAAATCGACACAAAGGATTTTTATCTTGGAAACCTaGGGATCGAAGAAATTTTCC +
Preference number: 3 (lower is better)
Translates to: DGPMPKSLHFLVKSTQRIFILET*GSKKFS
Trigger: GGAAAATTTCTTCGATCCCAAGGTTTCCAAGATAAA...AATCCTTTGTGTCGATTTCACCAAGAAGTGGAGACTTTTCGGCATCGGGCCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS-3UTR TCA 90 bp GGGAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCGCTGGGGGCGGCATGTaGGTGCCCTCCCGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: GSCWGRHVSALPKGTDSCAGGGM*VPSRRV
Trigger: TACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGC...GCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR GCA 90 bp CAGAAGCCCAGCTCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCAGGTTCCGGGGTCCCTaGCACTGGTCCCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: QKPSSSTSVRTRGPPGTCRFRGP*HWSQAS
Trigger: GCTTGCCTGGGACCAGTGGCAGGGACCCCGGAACCT...GCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGCTGGGCTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTGGGGGCGGCATGTaGGTGCCCTCCCGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARAGGGM*VPSRRV
Trigger: TACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGC...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGGCTGGGGGCGGCATGTaGGTGCCCTCCCGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: GRWLGRKRESSYSPPPRGAGGGM*VPSRRV
Trigger: TACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGC...CCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp TCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTAGGTTCCGGGGTCCCTaGCACTGGTCCCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: SSTSVRTRGPPGTCCGDSRFRGP*HWSQAS
Trigger: GCTTGCCTGGGACCAGTGGCAGGGACCCCGGAACCT...ACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGGTTCCGGGGTCCCTaGCACTGGTCCCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: EHVAHQAPAVGTVSLVGQRFRGP*HWSQAS
Trigger: GCTTGCCTGGGACCAGTGGCAGGGACCCCGGAACCT...CTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GCCATGATGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAACCGCTTCTAGACAACCCGACCGTCCCGGCTaGCGGGCGTCTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: AMMGCRQESGGLETASRQPDRPG*RASPAA
Trigger: AGCAGCAGGAGACGCCCGGCAGCCGGGACGGTCGGG...TTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396675.7
CDS-3UTR TCA 90 bp CAGAAGCCCAGCTCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCGGTCAGCGAAGAGGCTaGACCAGGCAGTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: QKPSSSTSVRTRGPPGTCGQRRG*TRQSGL
Trigger: CAGACCTGACTGCCTGGTTCAGCCTCTTCGCTGACC...GCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGCTGGGCTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp CACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCGGCCATAGTGGGCACTaGCTCCTTCACTTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: HVAHQAPAVGTVSLVGQSGHSGH*LLHLAV
Trigger: GACGGCCAAGTGAAGGAGCCAGTGCCCACTATGGCC...GCTCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTCCTCCACCAGTGTaGGAACACGTGGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARAPPPV*EHVAHQ
Trigger: CTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGC...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GGGAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCCGGGGACTCGGGGAGTaGGTTTCTCTCTCTCTACTC +
Preference number: 4 (lower is better)
Translates to: GSCWGRHVSALPKGTDSCRGLGE*VSLSLL
Trigger: GAGTAGAGAGAGAGAAACTCACTCCCCGAGTCCCCG...GCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339809.10
CDS-3UTR GCA 90 bp AGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTAGGTTCCGGGGTCCCTaGCACTGGTCCCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: SVRTRGPPGTCCGDSVFGRFRGP*HWSQAS
Trigger: GCTTGCCTGGGACCAGTGGCAGGGACCCCGGAACCT...ACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGGGGCGGCATGTGAGTaGCCTCCCGAAGGGTACAGA +
Preference number: 4 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARGAACE*PPEGYR
Trigger: TCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCC...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGGGGGCGGCATGTGAGTaGCCTCCCGAAGGGTACAGA +
Preference number: 4 (lower is better)
Translates to: GRWLGRKRESSYSPPPRGGAACE*PPEGYR
Trigger: TCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCC...CCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCC
62% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGGGCCATAGTGGGCACTaGCTCCTTCACTTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: EHVAHQAPAVGTVSLVGQGHSGH*LLHLAV
Trigger: GACGGCCAAGTGAAGGAGCCAGTGCCCACTATGGCC...CTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGCTGGGCCTTGGGGTCTaGCTCTCCCAGGGCCATAGT +
Preference number: 4 (lower is better)
Translates to: GRWLGRKRESSYSPPPRGLGLGV*LSQGHS
Trigger: ACTATGGCCCTGGGAGAGCCAGACCCCAAGGCCCAG...CCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGACTGGGCCTTGGGGTCTaGCTCTCCCAGGGCCATAGT +
Preference number: 4 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARLGLGV*LSQGHS
Trigger: ACTATGGCCCTGGGAGAGCCAGACCCCAAGGCCCAG...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATCGGCCCACTCTTTGCTaGACTCGCCCTCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: ELLGAACECPPEGYRFMHRPTLC*TRPLPR
Trigger: CCTTGGAAGAGGGCGAGTTCAGCAAAGAGTGGGCCG...ATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR TCA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGACGGCCCACTCTTTGCTaGACTCGCCCTCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARRPTLC*TRPLPR
Trigger: CCTTGGAAGAGGGCGAGTTCAGCAAAGAGTGGGCCG...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGCCAGGCAGTCAGGTCTaGGGCAGCCTTAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GRWLGRKRESSYSPPPRGPGSQV*GSLSRF
Trigger: GAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGG...CCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATGGTCAGCGAAGAGGCTaGACCAGGCAGTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: ELLGAACECPPEGYRFMHGQRRG*TRQSGL
Trigger: CAGACCTGACTGCCTGGTTCAGCCTCTTCGCTGACC...ATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR TCA 90 bp GAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGACACCGCAGCAGCCATaGTGGGATGTAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: EHVAHQAPAVGTVSLVGQTPQQP*WDVGRR
Trigger: TCTCCTGCCTACATCCCATCATGGCTGCTGCGGTGT...CTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGCTCACGGTAGCCCAGTaGCACCGCAGCAGCCATGAT +
Preference number: 4 (lower is better)
Translates to: GRWLGRKRESSYSPPPRGLTVAQ*HRSSHD
Trigger: ATCATGGCTGCTGCGGTGTCACTGGGCTACCGTGAG...CCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGACTCACGGTAGCCCAGTaGCACCGCAGCAGCCATGAT +
Preference number: 4 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARLTVAQ*HRSSHD
Trigger: ATCATGGCTGCTGCGGTGTCACTGGGCTACCGTGAG...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAGCTCCTCCACCAGTGTaGGAACACGTGGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: VAWQEEGIFLQPSSKGDRAPPPV*EHVAHQ
Trigger: CTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGC...TCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp CAGAAGCCCAGCTCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTCCTGCACTGTTCCATaGGGTTCACCGTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: QKPSSSTSVRTRGPPGTCSCTVP*GSPSAK
Trigger: CTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGA...GCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGCTGGGCTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp AGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCAGGTTCCGGGGTCCCTaGCACTGGTCCCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: SSLEGGLAGRGNLPTALLRFRGP*HWSQAS
Trigger: GCTTGCCTGGGACCAGTGGCAGGGACCCCGGAACCT...GAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp CTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGGGCGGCATGTGAGTaGCCTCCCGAAGGGTACAGA +
Preference number: 4 (lower is better)
Translates to: LEGGLAGRGNLPTALLQGGAACE*PPEGYR
Trigger: TCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCC...CCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGGCCCACCAGGCACCTaGTGTGGGGACAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARGPPGT*CGDSVF
Trigger: AAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCC...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GGGAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCGAAACAGCTCTAGCTTaGCATCCAGGTCCGCGTCAG +
Preference number: 4 (lower is better)
Translates to: GSCWGRHVSALPKGTDSCETALA*HPGPRQ
Trigger: CTGACGCGGACCTGGATGCCAAGCTAGAGCTGTTTC...GCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CCA 90 bp CAGAAGCCCAGCTCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCGAAACAGCTCTAGCTTaGCATCCAGGTCCGCGTCAG +
Preference number: 4 (lower is better)
Translates to: QKPSSSTSVRTRGPPGTCETALA*HPGPRQ
Trigger: CTGACGCGGACCTGGATGCCAAGCTAGAGCTGTTTC...GCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGCTGGGCTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GGGAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCACTGGCTCCTTCACTTaGCCGTCTCCAAACACAGCG +
Preference number: 4 (lower is better)
Translates to: GSCWGRHVSALPKGTDSCTGSFT*PSPNTA
Trigger: CGCTGTGTTTGGAGACGGCCAAGTGAAGGAGCCAGT...GCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CCA 90 bp GGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAGGGGCCATAGTGGGCACTaGCTCCTTCACTTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: GLAGRGNLPTALLQGGQRGHSGH*LLHLAV
Trigger: GACGGCCAAGTGAAGGAGCCAGTGCCCACTATGGCC...CCTCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp CAGAAGCCCAGCTCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCACCAGGCACCTGCTGTaGGGACAGTGTCTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: QKPSSSTSVRTRGPPGTCTRHLL*GQCLWL
Trigger: CAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGT...GCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGCTGGGCTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGCGTCAGCCAAGTATCTaGGATGGCCCGATGCCGAAA +
Preference number: 4 (lower is better)
Translates to: EHVAHQAPAVGTVSLVGQRQPSI*DGPMPK
Trigger: TTTCGGCATCGGGCCATCTCAGATACTTGGCTGACG...CTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGACGGCCCACTCTTTGCTaGACTCGCCCTCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: VAWQEEGIFLQPSSKGDRRPTLC*TRPLPR
Trigger: CCTTGGAAGAGGGCGAGTTCAGCAAAGAGTGGGCCG...TCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp TGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGCGGCCCACTCTTTGCTaGACTCGCCCTCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: CWGRHVSALPKGTDSCIERPTLC*TRPLPR
Trigger: CCTTGGAAGAGGGCGAGTTCAGCAAAGAGTGGGCCG...CTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR TCA 90 bp TGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGCCAGGCAGTCAGGTCTaGGGCAGCCTTAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: CWGRHVSALPKGTDSCIEPGSQV*GSLSRF
Trigger: GAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGG...CTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR TCA 90 bp CAGAAGCCCAGCTCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCAACAGCATCAGGATTTaGGAGTGGGTCGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QKPSSSTSVRTRGPPGTCNSIRI*EWVEVS
Trigger: GCTGACCTCGACCCACTCTCAAATCCTGATGCTGTT...GCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGCTGGGCTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp AGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTGCCTCCTGCTGCCTCTaGGGCTGTAGGACACGTCAT +
Preference number: 4 (lower is better)
Translates to: SVRTRGPPGTCCGDSVFGASCCL*GCRTRH
Trigger: ATGACGTGTCCTACAGCCTCAGAGGCAGCAGGAGGC...ACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR GCA 90 bp GAGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTGGGGCGGCATGTGAGTaGCCTCCCGAAGGGTACAGA +
Preference number: 4 (lower is better)
Translates to: ELTGRWLGRKRESSYSPPGAACE*PPEGYR
Trigger: TCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCC...AGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp CACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCAAGGCCAACCTTTGCTaGGAAGAAAAGCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: HVAHQAPAVGTVSLVGQSKANLC*EEKQRA
Trigger: GGCCCTCTGCTTTTCTTCCCAGCAAAGGTTGGCCTT...GCTCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAGGCCATAGTGGGCACTaGCTCCTTCACTTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: VAWQEEGIFLQPSSKGDRGHSGH*LLHLAV
Trigger: GACGGCCAAGTGAAGGAGCCAGTGCCCACTATGGCC...TCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp AGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTGGCCATAGTGGGCACTaGCTCCTTCACTTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: SVRTRGPPGTCCGDSVFGGHSGH*LLHLAV
Trigger: GACGGCCAAGTGAAGGAGCCAGTGCCCACTATGGCC...ACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp TGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGCAACTGGGCCTTGGGGTCTaGCTCTCCCAGGGCCATAGT +
Preference number: 4 (lower is better)
Translates to: WGRHVSALPKGTDSCIEQLGLGV*LSQGHS
Trigger: ACTATGGCCCTGGGAGAGCCAGACCCCAAGGCCCAG...TTGCTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CCA 90 bp CTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCACTGGGCCTTGGGGTCTaGCTCTCCCAGGGCCATAGT +
Preference number: 4 (lower is better)
Translates to: LTGRWLGRKRESSYSPPPLGLGV*LSQGHS
Trigger: ACTATGGCCCTGGGAGAGCCAGACCCCAAGGCCCAG...TGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GTCCTGCACTGTTCCATGCGGTTCACCGTCAGCCAAGTATCTGAGATGGCCCGACTGGGCCTTGGGGTCTaGCTCTCCCAGGGCCATAGT +
Preference number: 4 (lower is better)
Translates to: VLHCSMRFTVSQVSEMARLGLGV*LSQGHS
Trigger: ACTATGGCCCTGGGAGAGCCAGACCCCAAGGCCCAG...TCGGGCCATCTCAGATACTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS-3UTR CCA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAAAACCTGAGCCTGTCTaGGCCTTGGGGTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARKPEPV*ALGSGS
Trigger: AGAGCCAGACCCCAAGGCCCAGACAGGCTCAGGTTT...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCGAGCTCACTGGAAGGTaGCTTGGCAGGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: ENTWPTRHLLWGQCLWLAELTGR*LGRKRE
Trigger: TTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTC...GGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp CTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGCAGTGTGAGAACACGTaGCCCACCAGGCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: LEGGLAGRGNLPTALLQGQCENT*PTRHLL
Trigger: CAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTG...CCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp TGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGCAACGGGGTCCCTGCCACTaGTCCCAGGCAAGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: WGRHVSALPKGTDSCIEQRGPCH*SQASWY
Trigger: ATACCAGCTTGCCTGGGACCAGTGGCAGGGACCCCG...TTGCTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339809.10
CDS-3UTR CCA 90 bp GCCATGATGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAACCGCTTCTAGACAATCGACCCCCATCTCCTaGGGTATCCCCCGCTCGGAT +
Preference number: 4 (lower is better)
Translates to: AMMGCRQESGGLETASRQSTPIS*GIPRSD
Trigger: ATCCGAGCGGGGGATACCCCAGGAGATGGGGGTCGA...TTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406470.6
CDS-3UTR CCA 90 bp GGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTCGGGGTCCCTGCCACTaGTCCCAGGCAAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GQCLWLARASSRAHWKVARGPCH*SQASFL
Trigger: GAGGAAGCTTGCCTGGGACCAGTGGCAGGGACCCCG...AGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650486.1
3UTR CAA 72 bp GTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTaGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: VAHQAPAVGTVS*VGQSFIQSSLE
Trigger: TTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGCGTCAGCCAAGTATCTaGGATGGCCCGATGCCGAAA +
Preference number: 4 (lower is better)
Translates to: GRWLGRKRESSYSPPPRGRQPSI*DGPMPK
Trigger: TTTCGGCATCGGGCCATCTCAGATACTTGGCTGACG...CCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp CACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTCTGGATCAAGCTCCTaGGACACGTCCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: HVAHQAPAVGTVSLVGQSSGSSS*DTSFIH
Trigger: ATGGATGAAGGACGTGTCTCAGGAGCTTGATCCAGA...GCTCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp CTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCACGGCCCACTCTTTGCTaGACTCGCCCTCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LTGRWLGRKRESSYSPPPRPTLC*TRPLPR
Trigger: CCTTGGAAGAGGGCGAGTTCAGCAAAGAGTGGGCCG...TGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GCCATGATGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAACCGCTTCTAGACAACGGCCCACTCTTTGCTaGACTCGCCCTCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: AMMGCRQESGGLETASRQRPTLC*TRPLPR
Trigger: CCTTGGAAGAGGGCGAGTTCAGCAAAGAGTGGGCCG...TTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GAGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAGGCAGTCAGGTCTaGGGCAGCCTTAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: ELTGRWLGRKRESSYSPPPGSQV*GSLSRF
Trigger: GAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGG...AGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAACAGCATCAGGATTTaGGAGTGGGTCGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: EHVAHQAPAVGTVSLVGQNSIRI*EWVEVS
Trigger: GCTGACCTCGACCCACTCTCAAATCCTGATGCTGTT...CTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp CTCCTCTATATTCCGTCCTGCACTGTTCCATGCGGTTCACCGTCAGCCAAGTATGCTGGGGGCGGCATGTaGGTGCCCTCCCGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: LLYIPSCTVPCGSPSAKYAGGGM*VPSRRV
Trigger: TACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGC...ATACTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGACGGAATATAGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS-3UTR TCA 90 bp AGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTACACCGCAGCAGCCATaGTGGGATGTAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SVRTRGPPGTCCGDSVFGTPQQP*WDVGRR
Trigger: TCTCCTGCCTACATCCCATCATGGCTGCTGCGGTGT...ACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GAGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTGCCTCCTGCTGCCTCTaGGGCTGTAGGACACGTCAT +
Preference number: 4 (lower is better)
Translates to: ELTGRWLGRKRESSYSPPASCCL*GCRTRH
Trigger: ATGACGTGTCCTACAGCCTCAGAGGCAGCAGGAGGC...AGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR TCA 90 bp TGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGGCTCCTCCACCAGTGTaGGAACACGTGGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: CGDSVFGWPELHPELTGRAPPPV*EHVAHQ
Trigger: CTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGC...CCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTGCTCCTCCACCAGTGTaGGAACACGTGGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: GQCLWLARASSRAHWKVAAPPPV*EHVAHQ
Trigger: CTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGC...AGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGCTCCTCCACCAGTGTaGGAACACGTGGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: AVGTVSLVGQSFIQSSLEAPPPV*EHVAHQ
Trigger: CTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGC...TTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GTCCTGCACTGTTCCATGCGGTTCACCGTCAGCCAAGTATCTGAGATGGCCCGACCTGCCTCAGCCTCCTaGGTAGCTGGGACTGCACAT +
Preference number: 4 (lower is better)
Translates to: VLHCSMRFTVSQVSEMARPASAS*VAGTAH
Trigger: ATGTGCAGTCCCAGCTACTCAGGAGGCTGAGGCAGG...TCGGGCCATCTCAGATACTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS-3UTR GCA 90 bp CAGAAGCCCAGCTCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCGCCTTTCCTGTCGCTTaGATCATCTTTCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: QKPSSSTSVRTRGPPGTCAFPVA*IIFPAL
Trigger: CAGAGCAGGAAAGATGATGCAAGCGACAGGAAAGGC...GCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGCTGGGCTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp CACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCGCCTTTCCTGTCGCTTaGATCATCTTTCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: HVAHQAPAVGTVSLVGQSAFPVA*IIFPAL
Trigger: CAGAGCAGGAAAGATGATGCAAGCGACAGGAAAGGC...GCTCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GGGAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCCGTAAGGCCAACCTTTaGTGGGAAGAAAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GSCWGRHVSALPKGTDSCRKANL*WEEKQR
Trigger: CCTCTGCTTTTCTTCCCAGCAAAGGTTGGCCTTACG...GCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR GCA 90 bp CAGAAGCCCAGCTCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTCTGAGATGGCCCGATaGCGAAAAGTCTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: QKPSSSTSVRTRGPPGTCSEMAR*RKVSTS
Trigger: AGAAGTGGAGACTTTTCGGCATCGGGCCATCTCAGA...GCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGCTGGGCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp CACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTCTGAGATGGCCCGATaGCGAAAAGTCTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: HVAHQAPAVGTVSLVGQSSEMAR*RKVSTS
Trigger: AGAAGTGGAGACTTTTCGGCATCGGGCCATCTCAGA...GCTCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGATCCTGCACTGTTCCATaGGGTTCACCGTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARSCTVP*GSPSAK
Trigger: CTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGA...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GCCATGATGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAACCGCTTCTAGACAAGGCCCACCAGGCACCTaGTGTGGGGACAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: AMMGCRQESGGLETASRQGPPGT*CGDSVF
Trigger: AAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCC...TTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp TGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGCTGGGCCTTGGGGTCTaGCTCTCCCAGGGCCATAGT +
Preference number: 4 (lower is better)
Translates to: CGDSVFGWPELHPELTGRLGLGV*LSQGHS
Trigger: ACTATGGCCCTGGGAGAGCCAGACCCCAAGGCCCAG...CCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp TCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTCACTGGAAGGTGGCTTaGCAGGAAGAGGGAATCTTC +
Preference number: 4 (lower is better)
Translates to: SSTSVRTRGPPGTCCGDSHWKVA*QEEGIF
Trigger: GAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTG...ACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGGAGCTCACTGGAAGGTaGCTTGGCAGGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GRWLGRKRESSYSPPPRGELTGR*LGRKRE
Trigger: TTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTC...CCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGAGCTCACTGGAAGGTaGCTTGGCAGGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARELTGR*LGRKRE
Trigger: TTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTC...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp TCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTTCATCCAGAGCTCACTaGAAGGTGGCTTGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SSTSVRTRGPPGTCCGDSSSRAH*KVAWQE
Trigger: TTCCTGCCAAGCCACCTTCCAGTGAGCTCTGGATGA...ACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp TCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTTGGGGACAGTGTCTTTaGTTGGCCAGAGCTTCATCC +
Preference number: 4 (lower is better)
Translates to: SSTSVRTRGPPGTCCGDSWGQCL*LARASS
Trigger: GGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCA...ACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAACCAGGCACCTGCTGTaGGGACAGTGTCTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARTRHLL*GQCLWL
Trigger: CAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGT...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAGGACCAGGCACCTGCTGTaGGGACAGTGTCTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: GLAGRGNLPTALLQGGQRTRHLL*GQCLWL
Trigger: CAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGT...CCTCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GCCATGATGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAACCGCTTCTAGACAACAGTGTGAGAACACGTaGCCCACCAGGCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: AMMGCRQESGGLETASRQQCENT*PTRHLL
Trigger: CAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTG...TTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GAGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCAGTGTGAGAACACGTaGCCCACCAGGCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: ELTGRWLGRKRESSYSPPQCENT*PTRHLL
Trigger: CAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTG...AGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp CTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGGCCCGTCAGCCAAGTATCTaGGATGGCCCGATGCCGAAA +
Preference number: 4 (lower is better)
Translates to: LNQAVRSEAALAGSCSEARQPSI*DGPMPK
Trigger: TTTCGGCATCGGGCCATCTCAGATACTTGGCTGACG...GGCCTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR TCA 90 bp GCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAACCAGGCAGTCAGGTCTaGGGCAGCCTTAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AVGTVSLVGQSFIQSSLEPGSQV*GSLSRF
Trigger: GAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGG...TTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GCTGCCTCTGAGGCTGTAGGACACGTCATTCAAACCTACCATCAAAGTAGGCTTGCTGGGGGCGGCATGTaGGTGCCCTCCCGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: AASEAVGHVIQTYHQSRLAGGGM*VPSRRV
Trigger: TACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGC...AAGCCTACTTTGATGGTAGGTTTGAATGACGTGTCCTACAGCCTCAGAGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR TCA 90 bp GCCATGATGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAACCGCTTCTAGACAAACACCGCAGCAGCCATaGTGGGATGTAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: AMMGCRQESGGLETASRQTPQQP*WDVGRR
Trigger: TCTCCTGCCTACATCCCATCATGGCTGCTGCGGTGT...TTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAACTCACGGTAGCCCAGTaGCACCGCAGCAGCCATGAT +
Preference number: 4 (lower is better)
Translates to: AVGTVSLVGQSFIQSSLELTVAQ*HRSSHD
Trigger: ATCATGGCTGCTGCGGTGTCACTGGGCTACCGTGAG...TTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTGCCTCCTGCTGCCTCTaGGGCTGTAGGACACGTCAT +
Preference number: 4 (lower is better)
Translates to: GQCLWLARASSRAHWKVAASCCL*GCRTRH
Trigger: ATGACGTGTCCTACAGCCTCAGAGGCAGCAGGAGGC...AGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR GCA 90 bp AGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTCCTGCACTGTTCCATaGGGTTCACCGTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SVRTRGPPGTCCGDSVFGSCTVP*GSPSAK
Trigger: CTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGA...ACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp CTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGGCCTCCTGCACTGTTCCATaGGGTTCACCGTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: LNQAVRSEAALAGSCSEASCTVP*GSPSAK
Trigger: CTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGA...GGCCTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR GCA 90 bp GCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGCCCACCAGGCACCTaGTGTGGGGACAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: AVGTVSLVGQSFIQSSLEGPPGT*CGDSVF
Trigger: AAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCC...TTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGAAGGCCAACCTTTGCTaGGAAGAAAAGCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GRWLGRKRESSYSPPPRGKANLC*EEKQRA
Trigger: GGCCCTCTGCTTTTCTTCCCAGCAAAGGTTGGCCTT...CCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp TCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGCCAAGTATCTGAGATaGCCCGATGCCGAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: SSTSVRTRGPPGTCCGDSAKYLR*PDAEKS
Trigger: AGACTTTTCGGCATCGGGCCATCTCAGATACTTGGC...ACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAACTGGCTCCTTCACTTaGCCGTCTCCAAACACAGCG +
Preference number: 4 (lower is better)
Translates to: VAWQEEGIFLQPSSKGDRTGSFT*PSPNTA
Trigger: CGCTGTGTTTGGAGACGGCCAAGTGAAGGAGCCAGT...TCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp TGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGCAAAAACCTGAGCCTGTCTaGGCCTTGGGGTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: WGRHVSALPKGTDSCIEQKPEPV*ALGSGS
Trigger: AGAGCCAGACCCCAAGGCCCAGACAGGCTCAGGTTT...TTGCTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CCA 90 bp GTCCTGCACTGTTCCATGCGGTTCACCGTCAGCCAAGTATCTGAGATGGCCCGAAAACCTGAGCCTGTCTaGGCCTTGGGGTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: VLHCSMRFTVSQVSEMARKPEPV*ALGSGS
Trigger: AGAGCCAGACCCCAAGGCCCAGACAGGCTCAGGTTT...TCGGGCCATCTCAGATACTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS-3UTR CCA 90 bp GGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGCACTGGAAGGTGGCTTaGCAGGAAGAGGGAATCTTC +
Preference number: 4 (lower is better)
Translates to: GRWLGRKRESSYSPPPRGHWKVA*QEEGIF
Trigger: GAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTG...CCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGACACTGGAAGGTGGCTTaGCAGGAAGAGGGAATCTTC +
Preference number: 4 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARHWKVA*QEEGIF
Trigger: GAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTG...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAGAGCTCACTGGAAGGTaGCTTGGCAGGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: VAWQEEGIFLQPSSKGDRELTGR*LGRKRE
Trigger: TTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTC...TCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAGGTCATCCAGAGCTCACTaGAAGGTGGCTTGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GLAGRGNLPTALLQGGQRSSRAH*KVAWQE
Trigger: TTCCTGCCAAGCCACCTTCCAGTGAGCTCTGGATGA...CCTCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCGACAGTGTCTTTGGTTaGCCAGAGCTTCATCCAGAG +
Preference number: 4 (lower is better)
Translates to: ENTWPTRHLLWGQCLWLADSVFG*PELHPE
Trigger: CTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTC...GGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGATGGGGACAGTGTCTTTaGTTGGCCAGAGCTTCATCC +
Preference number: 4 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARWGQCL*LARASS
Trigger: GGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCA...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp TGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGCAGTGTGAGAACACGTaGCCCACCAGGCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: CGDSVFGWPELHPELTGRQCENT*PTRHLL
Trigger: CAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTG...CCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTATTATAACCTTGCTTaGGGAGGGTCGGGGACTCGG +
Preference number: 4 (lower is better)
Translates to: ELLGAACECPPEGYRFMHYYNLA*GGSGTR
Trigger: CCGAGTCCCCGACCCTCCCCAAGCAAGGTTATAATA...ATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339809.10
CDS-3UTR TCA 90 bp GCCATGATGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAACCGCTTCTAGACAACGTCAGCCAAGTATCTaGGATGGCCCGATGCCGAAA +
Preference number: 4 (lower is better)
Translates to: AMMGCRQESGGLETASRQRQPSI*DGPMPK
Trigger: TTTCGGCATCGGGCCATCTCAGATACTTGGCTGACG...TTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGATCTGGATCAAGCTCCTaGGACACGTCCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARSGSSS*DTSFIH
Trigger: ATGGATGAAGGACGTGTCTCAGGAGCTTGATCCAGA...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTCTGGATCAAGCTCCTaGGACACGTCCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: ELLGAACECPPEGYRFMHSGSSS*DTSFIH
Trigger: ATGGATGAAGGACGTGTCTCAGGAGCTTGATCCAGA...ATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR TCA 90 bp GACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTTCGGCCCACTCTTTGCTaGACTCGCCCTCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: DSVFGWPELHPELTGRWLRPTLC*TRPLPR
Trigger: CCTTGGAAGAGGGCGAGTTCAGCAAAGAGTGGGCCG...AAGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp TTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTGCTGGGGGCGGCATGTaGGTGCCCTCCCGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: FQPRRGQKETVVSANMAAAGGGM*VPSRRV
Trigger: TACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGC...AGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTCGGGGACTCGGGGAGTaGGTTTCTCTCTCTCTACTC +
Preference number: 4 (lower is better)
Translates to: GQCLWLARASSRAHWKVARGLGE*VSLSLL
Trigger: GAGTAGAGAGAGAGAAACTCACTCCCCGAGTCCCCG...AGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406470.6
CDS-3UTR TCA 90 bp CTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGGCCCATTATAGGTCACTGTaGTCCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LNQAVRSEAALAGSCSEAHYRSL*SSCLSL
Trigger: GAGGCTGAGGCAGGAGGATCACAGTGACCTATAATG...GGCCTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS-3UTR GCA 90 bp GAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATGCCTTTCCTGTCGCTTaGATCATCTTTCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ELLGAACECPPEGYRFMHAFPVA*IIFPAL
Trigger: CAGAGCAGGAAAGATGATGCAAGCGACAGGAAAGGC...ATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR GCA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCCTTTCCTGTCGCTTaGATCATCTTTCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARAFPVA*IIFPAL
Trigger: CAGAGCAGGAAAGATGATGCAAGCGACAGGAAAGGC...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAGGCGTAAGGCCAACCTTTaGTGGGAAGAAAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GLAGRGNLPTALLQGGQRRKANL*WEEKQR
Trigger: CCTCTGCTTTTCTTCCCAGCAAAGGTTGGCCTTACG...CCTCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp AGGCTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGTCCTGCACTGTTCCATaGGGTTCACCGTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RLNQAVRSEAALAGSCSESCTVP*GSPSAK
Trigger: CTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGA...CTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR GCA 90 bp GCCATGATGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAACCGCTTCTAGACAATCCTGCACTGTTCCATaGGGTTCACCGTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: AMMGCRQESGGLETASRQSCTVP*GSPSAK
Trigger: CTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGA...TTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp CACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTGTGAGACAAGAGATTaGATCTGCTCGCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: HVAHQAPAVGTVSLVGQSCETRD*ICSLQE
Trigger: TTCTTGGAGCGAGCAGATGCAATCTCTTGTCTCACA...GCTCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp TATCGGTTTTCCCAACAGCATCAGGATTTGAGAGTGGGTCGAGGTCAGCGAAGAAGGTTCCGGGGTCCCTaGCACTGGTCCCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: YRFSQQHQDLRVGRGQRRRFRGP*HWSQAS
Trigger: GCTTGCCTGGGACCAGTGGCAGGGACCCCGGAACCT...TCTTCGCTGACCTCGACCCACTCTCAAATCCTGATGCTGTTGGGAAAACCGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR GCA 90 bp GACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTTGGCCCACCAGGCACCTaGTGTGGGGACAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: DSVFGWPELHPELTGRWLGPPGT*CGDSVF
Trigger: AAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCC...AAGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GCCATGATGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAACCGCTTCTAGACAAGAAACAGCTCTAGCTTaGCATCCAGGTCCGCGTCAG +
Preference number: 4 (lower is better)
Translates to: AMMGCRQESGGLETASRQETALA*HPGPRQ
Trigger: CTGACGCGGACCTGGATGCCAAGCTAGAGCTGTTTC...TTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp CTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGAAGGCCAACCTTTGCTaGGAAGAAAAGCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LEGGLAGRGNLPTALLQGKANLC*EEKQRA
Trigger: GGCCCTCTGCTTTTCTTCCCAGCAAAGGTTGGCCTT...CCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGGCCAAGTATCTGAGATaGCCCGATGCCGAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: GRWLGRKRESSYSPPPRGAKYLR*PDAEKS
Trigger: AGACTTTTCGGCATCGGGCCATCTCAGATACTTGGC...CCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCCAAGTATCTGAGATaGCCCGATGCCGAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARAKYLR*PDAEKS
Trigger: AGACTTTTCGGCATCGGGCCATCTCAGATACTTGGC...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GCCATGATGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAACCGCTTCTAGACAAACTGGCTCCTTCACTTaGCCGTCTCCAAACACAGCG +
Preference number: 4 (lower is better)
Translates to: AMMGCRQESGGLETASRQTGSFT*PSPNTA
Trigger: CGCTGTGTTTGGAGACGGCCAAGTGAAGGAGCCAGT...TTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GAGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTACTGGCTCCTTCACTTaGCCGTCTCCAAACACAGCG +
Preference number: 4 (lower is better)
Translates to: ELTGRWLGRKRESSYSPPTGSFT*PSPNTA
Trigger: CGCTGTGTTTGGAGACGGCCAAGTGAAGGAGCCAGT...AGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp AGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCACTGGCTCCTTCACTTaGCCGTCTCCAAACACAGCG +
Preference number: 4 (lower is better)
Translates to: SSLEGGLAGRGNLPTALLTGSFT*PSPNTA
Trigger: CGCTGTGTTTGGAGACGGCCAAGTGAAGGAGCCAGT...GAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTAAACCTGAGCCTGTCTaGGCCTTGGGGTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: GQCLWLARASSRAHWKVAKPEPV*ALGSGS
Trigger: AGAGCCAGACCCCAAGGCCCAGACAGGCTCAGGTTT...AGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGATCATCCAGAGCTCACTaGAAGGTGGCTTGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: VAWQEEGIFLQPSSKGDRSSRAH*KVAWQE
Trigger: TTCCTGCCAAGCCACCTTCCAGTGAGCTCTGGATGA...TCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAGGGACAGTGTCTTTGGTTaGCCAGAGCTTCATCCAGAG +
Preference number: 4 (lower is better)
Translates to: GLAGRGNLPTALLQGGQRDSVFG*PELHPE
Trigger: CTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTC...CCTCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp TGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGTTCTGTCGCCCAGGCTaGAGCACAACGGCTCATTAT +
Preference number: 4 (lower is better)
Translates to: CWGRHVSALPKGTDSCIEFCRPG*STTAHY
Trigger: ATAATGAGCCGTTGTGCTCCAGCCTGGGCGACAGAA...CTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS-3UTR TCA 90 bp GGGAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCGTGTTTGTACCTTCCTaGACTTCTCCATTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: GSCWGRHVSALPKGTDSCVFVPS*TSPFAC
Trigger: ACAAGCAAATGGAGAAGTTCAGGAAGGTACAAACAC...GCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR TCA 90 bp TCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTTTCATCTATGGGTCCTaGGCATGCAGTATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: SSTSVRTRGPPGTCCGDSFIYGS*ACSMCR
Trigger: TCTACACATACTGCATGCTCAGGACCCATAGATGAA...ACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp CTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAACAGCATCAGGATTTaGGAGTGGGTCGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LTGRWLGRKRESSYSPPPNSIRI*EWVEVS
Trigger: GCTGACCTCGACCCACTCTCAAATCCTGATGCTGTT...TGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp CTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGGCCGCCTTTCCTGTCGCTTaGATCATCTTTCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LNQAVRSEAALAGSCSEAAFPVA*IIFPAL
Trigger: CAGAGCAGGAAAGATGATGCAAGCGACAGGAAAGGC...GGCCTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR GCA 90 bp CTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGCGTAAGGCCAACCTTTaGTGGGAAGAAAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LEGGLAGRGNLPTALLQGRKANL*WEEKQR
Trigger: CCTCTGCTTTTCTTCCCAGCAAAGGTTGGCCTTACG...CCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp AGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTCTGAGATGGCCCGATaGCGAAAAGTCTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: SVRTRGPPGTCCGDSVFGSEMAR*RKVSTS
Trigger: AGAAGTGGAGACTTTTCGGCATCGGGCCATCTCAGA...ACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAGGCTCTATATTCCGTCCTaGACTGTTCCATGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: GLAGRGNLPTALLQGGQRLYIPS*TVPCGS
Trigger: TGAACCGCATGGAACAGTGCAGGACGGAATATAGAG...CCTCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCACAAGAGATTGCATCTaGTCGCTCCAAGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: ENTWPTRHLLWGQCLWLATRDCI*SLQEDP
Trigger: TGGATCTTCTTGGAGCGAGCAGATGCAATCTCTTGT...GGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGGGAGACAGTGGTATCTaGAAATATGGCTGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: EHVAHQAPAVGTVSLVGQGDSGI*KYGCFP
Trigger: TGGAAAGCAGCCATATTTGCAGATACCACTGTCTCC...CTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGTCCCAGGGATAACTaGATTTGTGTCCTGACATGT +
Preference number: 4 (lower is better)
Translates to: EHVAHQAPAVGTVSLVGQSPRDN*ICVLTC
Trigger: ACATGTCAGGACACAAATGCAGTTATCCCTGGGACT...CTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGAAACAGCTCTAGCTTaGCATCCAGGTCCGCGTCAG +
Preference number: 4 (lower is better)
Translates to: AVGTVSLVGQSFIQSSLEETALA*HPGPRQ
Trigger: CTGACGCGGACCTGGATGCCAAGCTAGAGCTGTTTC...TTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp CTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAAGGCCAACCTTTGCTaGGAAGAAAAGCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LTGRWLGRKRESSYSPPPKANLC*EEKQRA
Trigger: GGCCCTCTGCTTTTCTTCCCAGCAAAGGTTGGCCTT...TGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp CTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGGCCGCCAAGTATCTGAGATaGCCCGATGCCGAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: LNQAVRSEAALAGSCSEAAKYLR*PDAEKS
Trigger: AGACTTTTCGGCATCGGGCCATCTCAGATACTTGGC...GGCCTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CCA 90 bp GAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCTCTAATGAAATTAATTaGCTCGGCTCCTGCACGGCT +
Preference number: 4 (lower is better)
Translates to: ENTWPTRHLLWGQCLWLASNEIN*LGSCTA
Trigger: AGCCGTGCAGGAGCCGAGCCAATTAATTTCATTAGA...GGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTTAAACCTGAGCCTGTCTaGGCCTTGGGGTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: DSVFGWPELHPELTGRWLKPEPV*ALGSGS
Trigger: AGAGCCAGACCCCAAGGCCCAGACAGGCTCAGGTTT...AAGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp CTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGAGAGCGGTGGCCTaGAAACCGCTTCTAGACAAT +
Preference number: 4 (lower is better)
Translates to: LTGRWLGRKRESSYSPPPRRAVA*KPLLDN
Trigger: ATTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCT...TGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTGAGCTCACTGGAAGGTaGCTTGGCAGGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GQCLWLARASSRAHWKVAELTGR*LGRKRE
Trigger: TTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTC...AGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp TGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGACCAGGCACCTGCTGTaGGGACAGTGTCTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: CGDSVFGWPELHPELTGRTRHLL*GQCLWL
Trigger: CAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGT...CCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp TCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTCCACTTCTTGGTaGAATCGACACAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: SSTSVRTRGPPGTCCGDSVSTSW*NRHKGF
Trigger: AAATCCTTTGTGTCGATTTCACCAAGAAGTGGAGAC...ACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTTCGTCAGCCAAGTATCTaGGATGGCCCGATGCCGAAA +
Preference number: 4 (lower is better)
Translates to: DSVFGWPELHPELTGRWLRQPSI*DGPMPK
Trigger: TTTCGGCATCGGGCCATCTCAGATACTTGGCTGACG...AAGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp AGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCTCTGGATCAAGCTCCTaGGACACGTCCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: SSLEGGLAGRGNLPTALLSGSSS*DTSFIH
Trigger: ATGGATGAAGGACGTGTCTCAGGAGCTTGATCCAGA...GAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGGTGTTTGTACCTTCCTaGACTTCTCCATTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: EHVAHQAPAVGTVSLVGQVFVPS*TSPFAC
Trigger: ACAAGCAAATGGAGAAGTTCAGGAAGGTACAAACAC...CTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GCTGCCTCTGAGGCTGTAGGACACGTCATTCAAACCTACCATCAAAGTAGGCTTCCAGGCAGTCAGGTCTaGGGCAGCCTTAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AASEAVGHVIQTYHQSRLPGSQV*GSLSRF
Trigger: GAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGG...AAGCCTACTTTGATGGTAGGTTTGAATGACGTGTCCTACAGCCTCAGAGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR TCA 90 bp GCTGCCTCTGAGGCTGTAGGACACGTCATTCAAACCTACCATCAAAGTAGGCTTGGTCAGCGAAGAGGCTaGACCAGGCAGTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: AASEAVGHVIQTYHQSRLGQRRG*TRQSGL
Trigger: CAGACCTGACTGCCTGGTTCAGCCTCTTCGCTGACC...AAGCCTACTTTGATGGTAGGTTTGAATGACGTGTCCTACAGCCTCAGAGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR TCA 90 bp CAGAAGCCCAGCTCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCATCAAAGTAGGCTTCTaGTTTCAACTTGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: QKPSSSTSVRTRGPPGTCIKVGF*FQLGSH
Trigger: GTGAGATCCAAGTTGAAATCAGAAGCCTACTTTGAT...GCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGCTGGGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp CAGAAGCCCAGCTCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCGCTTTAATAAAGGCCTaGTTCGTCTCCCAATATTTC +
Preference number: 4 (lower is better)
Translates to: QKPSSSTSVRTRGPPGTCALIKA*FVSQYF
Trigger: GAAATATTGGGAGACGAAGCAGGCCTTTATTAAAGC...GCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGCTGGGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp CTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAGCCTTTCCTGTCGCTTaGATCATCTTTCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LTGRWLGRKRESSYSPPPAFPVA*IIFPAL
Trigger: CAGAGCAGGAAAGATGATGCAAGCGACAGGAAAGGC...TGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GCCATGATGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAACCGCTTCTAGACAACGTAAGGCCAACCTTTaGTGGGAAGAAAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: AMMGCRQESGGLETASRQRKANL*WEEKQR
Trigger: CCTCTGCTTTTCTTCCCAGCAAAGGTTGGCCTTACG...TTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAAGAGATTGCATCTaGTCGCTCCAAGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: GRWLGRKRESSYSPPPRGTRDCI*SLQEDP
Trigger: TGGATCTTCTTGGAGCGAGCAGATGCAATCTCTTGT...CCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GCCTTTCCTGTCGCTTGCATCATCTTTCCTGCTCTGGTTTTATCTTGGAAACCTAGGTTCCGGGGTCCCTaGCACTGGTCCCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: AFPVACIIFPALVLSWKPRFRGP*HWSQAS
Trigger: GCTTGCCTGGGACCAGTGGCAGGGACCCCGGAACCT...AGGTTTCCAAGATAAAACCAGAGCAGGAAAGATGATGCAAGCGACAGGAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS-3UTR GCA 90 bp GAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATAGTCCCAGGGATAACTaGATTTGTGTCCTGACATGT +
Preference number: 4 (lower is better)
Translates to: ELLGAACECPPEGYRFMHSPRDN*ICVLTC
Trigger: ACATGTCAGGACACAAATGCAGTTATCCCTGGGACT...ATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CCA 90 bp GAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGGCTCTGGTTTTATCTTaGAAACCTTGGGATCGAAGA +
Preference number: 4 (lower is better)
Translates to: EHVAHQAPAVGTVSLVGQALVLS*KPWDRR
Trigger: TCTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGC...CTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GCCATGATGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAACCGCTTCTAGACAAGCCAAGTATCTGAGATaGCCCGATGCCGAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: AMMGCRQESGGLETASRQAKYLR*PDAEKS
Trigger: AGACTTTTCGGCATCGGGCCATCTCAGATACTTGGC...TTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp CTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAGCCAAGTATCTGAGATaGCCCGATGCCGAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: LTGRWLGRKRESSYSPPPAKYLR*PDAEKS
Trigger: AGACTTTTCGGCATCGGGCCATCTCAGATACTTGGC...TGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp TATCGGTTTTCCCAACAGCATCAGGATTTGAGAGTGGGTCGAGGTCAGCGAAGAGGCCATAGTGGGCACTaGCTCCTTCACTTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: YRFSQQHQDLRVGRGQRRGHSGH*LLHLAV
Trigger: GACGGCCAAGTGAAGGAGCCAGTGCCCACTATGGCC...TCTTCGCTGACCTCGACCCACTCTCAAATCCTGATGCTGTTGGGAAAACCGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CCA 90 bp TGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGAGGAGAGCGGTGGCCTaGAAACCGCTTCTAGACAAT +
Preference number: 4 (lower is better)
Translates to: CGDSVFGWPELHPELTGRRRAVA*KPLLDN
Trigger: ATTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCT...CCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp TGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTCATCCAGAGCTCACTaGAAGGTGGCTTGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: CGDSVFGWPELHPELTGRSSRAH*KVAWQE
Trigger: TTCCTGCCAAGCCACCTTCCAGTGAGCTCTGGATGA...CCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp TGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGGGACAGTGTCTTTaGTTGGCCAGAGCTTCATCC +
Preference number: 4 (lower is better)
Translates to: CGDSVFGWPELHPELTGRWGQCL*LARASS
Trigger: GGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCA...CCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAATGGGGACAGTGTCTTTaGTTGGCCAGAGCTTCATCC +
Preference number: 4 (lower is better)
Translates to: AVGTVSLVGQSFIQSSLEWGQCL*LARASS
Trigger: GGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCA...TTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCGACAAAAGGAGACAGTaGTATCTGCAAATATGGCTG +
Preference number: 4 (lower is better)
Translates to: ENTWPTRHLLWGQCLWLADKRRQ*YLQIWL
Trigger: CAGCCATATTTGCAGATACCACTGTCTCCTTTTGTC...GGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAGGGTCTCCACTTCTTGGTaGAATCGACACAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: GLAGRGNLPTALLQGGQRVSTSW*NRHKGF
Trigger: AAATCCTTTGTGTCGATTTCACCAAGAAGTGGAGAC...CCTCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GCAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTGGTCAGCGAAGAGGCTaGACCAGGCAGTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: ANMAAFHSKVCALDRSPAGQRRG*TRQSGL
Trigger: CAGACCTGACTGCCTGGTTCAGCCTCTTCGCTGACC...AGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp ATATTTTGGTCTAAAAGCTGCGAAGGAAGGAAACCTGAGCCTGTCTGGGCCTTGGGTCAGCGAAGAGGCTaGACCAGGCAGTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: IFWSKSCEGRKPEPVWALGQRRG*TRQSGL
Trigger: CAGACCTGACTGCCTGGTTCAGCCTCTTCGCTGACC...CAAGGCCCAGACAGGCTCAGGTTTCCTTCCTTCGCAGCTTTTAGACCAAAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR GCA 90 bp GCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAATCTGAGATGGCCCGATaGCGAAAAGTCTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: AVGTVSLVGQSFIQSSLESEMAR*RKVSTS
Trigger: AGAAGTGGAGACTTTTCGGCATCGGGCCATCTCAGA...TTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GAGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCTCTATATTCCGTCCTaGACTGTTCCATGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: ELTGRWLGRKRESSYSPPLYIPS*TVPCGS
Trigger: TGAACCGCATGGAACAGTGCAGGACGGAATATAGAG...AGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GTCCTGCACTGTTCCATGCGGTTCACCGTCAGCCAAGTATCTGAGATGGCCCGACTCTATATTCCGTCCTaGACTGTTCCATGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: VLHCSMRFTVSQVSEMARLYIPS*TVPCGS
Trigger: TGAACCGCATGGAACAGTGCAGGACGGAATATAGAG...TCGGGCCATCTCAGATACTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS-3UTR GCA 90 bp AGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCTCTATATTCCGTCCTaGACTGTTCCATGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: SSLEGGLAGRGNLPTALLLYIPS*TVPCGS
Trigger: TGAACCGCATGGAACAGTGCAGGACGGAATATAGAG...GAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAACAAGAGATTGCATCTaGTCGCTCCAAGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: VAWQEEGIFLQPSSKGDRTRDCI*SLQEDP
Trigger: TGGATCTTCTTGGAGCGAGCAGATGCAATCTCTTGT...TCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGATGTGAGACAAGAGATTaGATCTGCTCGCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: VAWQEEGIFLQPSSKGDRCETRD*ICSLQE
Trigger: TTCTTGGAGCGAGCAGATGCAATCTCTTGTCTCACA...TCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp AGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGTGAGACAAGAGATTaGATCTGCTCGCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: SVRTRGPPGTCCGDSVFGCETRD*ICSLQE
Trigger: TTCTTGGAGCGAGCAGATGCAATCTCTTGTCTCACA...ACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAAGGGTACAGATTCATaGATTGAGCAATTCGTGTTC +
Preference number: 4 (lower is better)
Translates to: EHVAHQAPAVGTVSLVGQKGTDS*IEQFVF
Trigger: GAACACGAATTGCTCAATGCATGAATCTGTACCCTT...CTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAAGGGTACAGATTCATaGATTGAGCAATTCGTGTTC +
Preference number: 4 (lower is better)
Translates to: ENTWPTRHLLWGQCLWLAKGTDS*IEQFVF
Trigger: GAACACGAATTGCTCAATGCATGAATCTGTACCCTT...GGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp TCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTAAGGGTACAGATTCATaGATTGAGCAATTCGTGTTC +
Preference number: 4 (lower is better)
Translates to: SSTSVRTRGPPGTCCGDSKGTDS*IEQFVF
Trigger: GAACACGAATTGCTCAATGCATGAATCTGTACCCTT...ACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp CGCTTGCATCATCTTTCCTGCTCTGGTTTTATCTTGGAAACCTTGGGATCGAAGGGGGCGGCATGTGAGTaGCCTCCCGAAGGGTACAGA +
Preference number: 4 (lower is better)
Translates to: RLHHLSCSGFILETLGSKGAACE*PPEGYR
Trigger: TCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCC...CTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGCAGGAAAGATGATGCAAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS-3UTR GCA 90 bp TTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTGGCCCACCAGGCACCTaGTGTGGGGACAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: FQPRRGQKETVVSANMAAGPPGT*CGDSVF
Trigger: AAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCC...AGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp AGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTAGTCCCAGGGATAACTaGATTTGTGTCCTGACATGT +
Preference number: 4 (lower is better)
Translates to: SVRTRGPPGTCCGDSVFGSPRDN*ICVLTC
Trigger: ACATGTCAGGACACAAATGCAGTTATCCCTGGGACT...ACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp CACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTATCTTGGAAACCTTaGGATCGAAGAAATTTTCCC +
Preference number: 4 (lower is better)
Translates to: HVAHQAPAVGTVSLVGQSLSWKP*DRRNFP
Trigger: GGGAAAATTTCTTCGATCCCAAGGTTTCCAAGATAA...GCTCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGGCTCTGGTTTTATCTTaGAAACCTTGGGATCGAAGA +
Preference number: 4 (lower is better)
Translates to: GRWLGRKRESSYSPPPRGALVLS*KPWDRR
Trigger: TCTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGC...CCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGATCTAATGAAATTAATTaGCTCGGCTCCTGCACGGCT +
Preference number: 4 (lower is better)
Translates to: VAWQEEGIFLQPSSKGDRSNEIN*LGSCTA
Trigger: AGCCGTGCAGGAGCCGAGCCAATTAATTTCATTAGA...TCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GCTGCCTCTGAGGCTGTAGGACACGTCATTCAAACCTACCATCAAAGTAGGCTTAAACCTGAGCCTGTCTaGGCCTTGGGGTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: AASEAVGHVIQTYHQSRLKPEPV*ALGSGS
Trigger: AGAGCCAGACCCCAAGGCCCAGACAGGCTCAGGTTT...AAGCCTACTTTGATGGTAGGTTTGAATGACGTGTCCTACAGCCTCAGAGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR CCA 90 bp GACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTTAGGAGAGCGGTGGCCTaGAAACCGCTTCTAGACAAT +
Preference number: 4 (lower is better)
Translates to: DSVFGWPELHPELTGRWLRRAVA*KPLLDN
Trigger: ATTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCT...AAGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTGACAGTGTCTTTGGTTaGCCAGAGCTTCATCCAGAG +
Preference number: 4 (lower is better)
Translates to: GQCLWLARASSRAHWKVADSVFG*PELHPE
Trigger: CTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTC...AGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp CAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTCCAGTGTGAGAACACGTaGCCCACCAGGCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: QIWLLSIVRFVPWTEAQLQCENT*PTRHLL
Trigger: CAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTG...GAGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GGAGCAGGACCAATCATTAGACTCAAGTTCACCACAATTCATCTCCCAGGAACATCGACCCCCATCTCCTaGGGTATCCCCCGCTCGGAT +
Preference number: 4 (lower is better)
Translates to: GAGPIIRLKFTTIHLPGTSTPIS*GIPRSD
Trigger: ATCCGAGCGGGGGATACCCCAGGAGATGGGGGTCGA...TGTTCCTGGGAGATGAATTGTGGTGAACTTGAGTCTAATGATTGGTCCTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR TCA 90 bp GGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAACTGACTTATCTTaGGCATATCGATCCTGTAAG +
Preference number: 4 (lower is better)
Translates to: GRWLGRKRESSYSPPPRGTTDLS*AYRSCK
Trigger: CTTACAGGATCGATATGCTCAAGATAAGTCAGTTGT...CCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp TGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGGTCTCCACTTCTTGGTaGAATCGACACAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: CWGRHVSALPKGTDSCIEVSTSW*NRHKGF
Trigger: AAATCCTTTGTGTCGATTTCACCAAGAAGTGGAGAC...CTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR TCA 90 bp GACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTTTCTGGATCAAGCTCCTaGGACACGTCCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: DSVFGWPELHPELTGRWLSGSSS*DTSFIH
Trigger: ATGGATGAAGGACGTGTCTCAGGAGCTTGATCCAGA...AAGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp CTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGGCCGTGTTTGTACCTTCCTaGACTTCTCCATTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: LNQAVRSEAALAGSCSEAVFVPS*TSPFAC
Trigger: ACAAGCAAATGGAGAAGTTCAGGAAGGTACAAACAC...GGCCTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR TCA 90 bp GCCATGATGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAACCGCTTCTAGACAATTCATCTATGGGTCCTaGGCATGCAGTATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: AMMGCRQESGGLETASRQFIYGS*ACSMCR
Trigger: TCTACACATACTGCATGCTCAGGACCCATAGATGAA...TTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp TTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTACACCGCAGCAGCCATaGTGGGATGTAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: FQPRRGQKETVVSANMAATPQQP*WDVGRR
Trigger: TCTCCTGCCTACATCCCATCATGGCTGCTGCGGTGT...AGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAGGATCAAAGTAGGCTTCTaGTTTCAACTTGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: GLAGRGNLPTALLQGGQRIKVGF*FQLGSH
Trigger: GTGAGATCCAAGTTGAAATCAGAAGCCTACTTTGAT...CCTCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATGCTTTAATAAAGGCCTaGTTCGTCTCCCAATATTTC +
Preference number: 4 (lower is better)
Translates to: ELLGAACECPPEGYRFMHALIKA*FVSQYF
Trigger: GAAATATTGGGAGACGAAGCAGGCCTTTATTAAAGC...ATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR GCA 90 bp GGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAGGGCTTTAATAAAGGCCTaGTTCGTCTCCCAATATTTC +
Preference number: 4 (lower is better)
Translates to: GLAGRGNLPTALLQGGQRALIKA*FVSQYF
Trigger: GAAATATTGGGAGACGAAGCAGGCCTTTATTAAAGC...CCTCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GCTGCCTCTGAGGCTGTAGGACACGTCATTCAAACCTACCATCAAAGTAGGCTTTCCTGCACTGTTCCATaGGGTTCACCGTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: AASEAVGHVIQTYHQSRLSCTVP*GSPSAK
Trigger: CTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGA...AAGCCTACTTTGATGGTAGGTTTGAATGACGTGTCCTACAGCCTCAGAGGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR GCA 90 bp GCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAACTCTATATTCCGTCCTaGACTGTTCCATGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: AVGTVSLVGQSFIQSSLELYIPS*TVPCGS
Trigger: TGAACCGCATGGAACAGTGCAGGACGGAATATAGAG...TTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp AGGCTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGACAAGAGATTGCATCTaGTCGCTCCAAGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: RLNQAVRSEAALAGSCSETRDCI*SLQEDP
Trigger: TGGATCTTCTTGGAGCGAGCAGATGCAATCTCTTGT...CTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAGCCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CCA 90 bp CTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGGCCGCTCTGGTTTTATCTTaGAAACCTTGGGATCGAAGA +
Preference number: 4 (lower is better)
Translates to: LNQAVRSEAALAGSCSEAALVLS*KPWDRR
Trigger: TCTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGC...GGCCTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CCA 90 bp TGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGCAATCTAATGAAATTAATTaGCTCGGCTCCTGCACGGCT +
Preference number: 4 (lower is better)
Translates to: WGRHVSALPKGTDSCIEQSNEIN*LGSCTA
Trigger: AGCCGTGCAGGAGCCGAGCCAATTAATTTCATTAGA...TTGCTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS-3UTR CCA 90 bp GGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGCTAATAGTTCATCTATaGGTCCTGAGCATGCAGTAT +
Preference number: 4 (lower is better)
Translates to: GRWLGRKRESSYSPPPRGLIVHL*VLSMQY
Trigger: ATACTGCATGCTCAGGACCCATAGATGAACTATTAG...CCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp ATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCAAACCTGAGCCTGTCTaGGCCTTGGGGTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: IPATKRTKGDSGICKYGCKPEPV*ALGSGS
Trigger: AGAGCCAGACCCCAAGGCCCAGACAGGCTCAGGTTT...GCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTTGACAGTGTCTTTGGTTaGCCAGAGCTTCATCCAGAG +
Preference number: 4 (lower is better)
Translates to: DSVFGWPELHPELTGRWLDSVFG*PELHPE
Trigger: CTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTC...AAGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp AGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCGTCTCCACTTCTTGGTaGAATCGACACAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: SSLEGGLAGRGNLPTALLVSTSW*NRHKGF
Trigger: AAATCCTTTGTGTCGATTTCACCAAGAAGTGGAGAC...GAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GCAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTCGTCAGCCAAGTATCTaGGATGGCCCGATGCCGAAA +
Preference number: 4 (lower is better)
Translates to: ANMAAFHSKVCALDRSPARQPSI*DGPMPK
Trigger: TTTCGGCATCGGGCCATCTCAGATACTTGGCTGACG...AGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp ATATTTTGGTCTAAAAGCTGCGAAGGAAGGAAACCTGAGCCTGTCTGGGCCTTGCGTCAGCCAAGTATCTaGGATGGCCCGATGCCGAAA +
Preference number: 4 (lower is better)
Translates to: IFWSKSCEGRKPEPVWALRQPSI*DGPMPK
Trigger: TTTCGGCATCGGGCCATCTCAGATACTTGGCTGACG...CAAGGCCCAGACAGGCTCAGGTTTCCTTCCTTCGCAGCTTTTAGACCAAAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR TCA 90 bp CGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTTTCCATAGTCCAGGCAGTCAGGTCTaGGGCAGCCTTAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: RRGQKETVVSANMAAFHSPGSQV*GSLSRF
Trigger: GAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGG...ACTATGGAAAGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp CGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTTTCCATAGTGGTCAGCGAAGAGGCTaGACCAGGCAGTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RRGQKETVVSANMAAFHSGQRRG*TRQSGL
Trigger: CAGACCTGACTGCCTGGTTCAGCCTCTTCGCTGACC...ACTATGGAAAGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GCTGCCTCTGAGGCTGTAGGACACGTCATTCAAACCTACCATCAAAGTAGGCTTAACAGCATCAGGATTTaGGAGTGGGTCGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: AASEAVGHVIQTYHQSRLNSIRI*EWVEVS
Trigger: GCTGACCTCGACCCACTCTCAAATCCTGATGCTGTT...AAGCCTACTTTGATGGTAGGTTTGAATGACGTGTCCTACAGCCTCAGAGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR TCA 90 bp CGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTTTCCATAGTCTCACGGTAGCCCAGTaGCACCGCAGCAGCCATGAT +
Preference number: 4 (lower is better)
Translates to: RRGQKETVVSANMAAFHSLTVAQ*HRSSHD
Trigger: ATCATGGCTGCTGCGGTGTCACTGGGCTACCGTGAG...ACTATGGAAAGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp CTCCTCTATATTCCGTCCTGCACTGTTCCATGCGGTTCACCGTCAGCCAAGTATCGTAAGGCCAACCTTTaGTGGGAAGAAAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LLYIPSCTVPCGSPSAKYRKANL*WEEKQR
Trigger: CCTCTGCTTTTCTTCCCAGCAAAGGTTGGCCTTACG...ATACTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGACGGAATATAGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS-3UTR GCA 90 bp AGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTAAGGGTACAGATTCATaGATTGAGCAATTCGTGTTC +
Preference number: 4 (lower is better)
Translates to: SVRTRGPPGTCCGDSVFGKGTDS*IEQFVF
Trigger: GAACACGAATTGCTCAATGCATGAATCTGTACCCTT...ACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGAGACAGTGGTATCTaGAAATATGGCTGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: AVGTVSLVGQSFIQSSLEGDSGI*KYGCFP
Trigger: TGGAAAGCAGCCATATTTGCAGATACCACTGTCTCC...TTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTGGAGACAGTGGTATCTaGAAATATGGCTGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: GQCLWLARASSRAHWKVAGDSGI*KYGCFP
Trigger: TGGAAAGCAGCCATATTTGCAGATACCACTGTCTCC...AGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp TGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGAGTCCCAGGGATAACTaGATTTGTGTCCTGACATGT +
Preference number: 4 (lower is better)
Translates to: CGDSVFGWPELHPELTGRSPRDN*ICVLTC
Trigger: ACATGTCAGGACACAAATGCAGTTATCCCTGGGACT...CCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAGGTTATCTTGGAAACCTTaGGATCGAAGAAATTTTCCC +
Preference number: 4 (lower is better)
Translates to: GLAGRGNLPTALLQGGQRLSWKP*DRRNFP
Trigger: GGGAAAATTTCTTCGATCCCAAGGTTTCCAAGATAA...CCTCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GCTGCCTCTGAGGCTGTAGGACACGTCATTCAAACCTACCATCAAAGTAGGCTTAAGGCCAACCTTTGCTaGGAAGAAAAGCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: AASEAVGHVIQTYHQSRLKANLC*EEKQRA
Trigger: GGCCCTCTGCTTTTCTTCCCAGCAAAGGTTGGCCTT...AAGCCTACTTTGATGGTAGGTTTGAATGACGTGTCCTACAGCCTCAGAGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR CCA 90 bp TCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTAAGTCTTTCATATTTTaGTCTAAAAGCTGCGAAGGA +
Preference number: 4 (lower is better)
Translates to: SSTSVRTRGPPGTCCGDSKSFIF*SKSCEG
Trigger: TCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTT...ACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAAGTCTTTCATATTTTaGTCTAAAAGCTGCGAAGGA +
Preference number: 4 (lower is better)
Translates to: ENTWPTRHLLWGQCLWLAKSFIF*SKSCEG
Trigger: TCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTT...GGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GCTGCCTCTGAGGCTGTAGGACACGTCATTCAAACCTACCATCAAAGTAGGCTTAGGAGAGCGGTGGCCTaGAAACCGCTTCTAGACAAT +
Preference number: 4 (lower is better)
Translates to: AASEAVGHVIQTYHQSRLRRAVA*KPLLDN
Trigger: ATTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCT...AAGCCTACTTTGATGGTAGGTTTGAATGACGTGTCCTACAGCCTCAGAGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR CCA 90 bp GCTGCCTCTGAGGCTGTAGGACACGTCATTCAAACCTACCATCAAAGTAGGCTTTGGGGACAGTGTCTTTaGTTGGCCAGAGCTTCATCC +
Preference number: 4 (lower is better)
Translates to: AASEAVGHVIQTYHQSRLWGQCL*LARASS
Trigger: GGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCA...AAGCCTACTTTGATGGTAGGTTTGAATGACGTGTCCTACAGCCTCAGAGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR CCA 90 bp GCCATGATGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAACCGCTTCTAGACAAGACAAAAGGAGACAGTaGTATCTGCAAATATGGCTG +
Preference number: 4 (lower is better)
Translates to: AMMGCRQESGGLETASRQDKRRQ*YLQIWL
Trigger: CAGCCATATTTGCAGATACCACTGTCTCCTTTTGTC...TTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GCTGCCTCTGAGGCTGTAGGACACGTCATTCAAACCTACCATCAAAGTAGGCTTTATTATAACCTTGCTTaGGGAGGGTCGGGGACTCGG +
Preference number: 4 (lower is better)
Translates to: AASEAVGHVIQTYHQSRLYYNLA*GGSGTR
Trigger: CCGAGTCCCCGACCCTCCCCAAGCAAGGTTATAATA...AAGCCTACTTTGATGGTAGGTTTGAATGACGTGTCCTACAGCCTCAGAGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406470.6
CDS-3UTR TCA 90 bp TGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGCAAACAACTGACTTATCTTaGGCATATCGATCCTGTAAG +
Preference number: 4 (lower is better)
Translates to: WGRHVSALPKGTDSCIEQTTDLS*AYRSCK
Trigger: CTTACAGGATCGATATGCTCAAGATAAGTCAGTTGT...TTGCTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR TCA 90 bp CTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAACAACTGACTTATCTTaGGCATATCGATCCTGTAAG +
Preference number: 4 (lower is better)
Translates to: LTGRWLGRKRESSYSPPPTTDLS*AYRSCK
Trigger: CTTACAGGATCGATATGCTCAAGATAAGTCAGTTGT...TGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp TATCGGTTTTCCCAACAGCATCAGGATTTGAGAGTGGGTCGAGGTCAGCGAAGATCTGGATCAAGCTCCTaGGACACGTCCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: YRFSQQHQDLRVGRGQRRSGSSS*DTSFIH
Trigger: ATGGATGAAGGACGTGTCTCAGGAGCTTGATCCAGA...TCTTCGCTGACCTCGACCCACTCTCAAATCCTGATGCTGTTGGGAAAACCGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR TCA 90 bp GGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTGTGTTTGTACCTTCCTaGACTTCTCCATTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: GQCLWLARASSRAHWKVAVFVPS*TSPFAC
Trigger: ACAAGCAAATGGAGAAGTTCAGGAAGGTACAAACAC...AGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp CAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTCAACAGCATCAGGATTTaGGAGTGGGTCGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QIWLLSIVRFVPWTEAQLNSIRI*EWVEVS
Trigger: GCTGACCTCGACCCACTCTCAAATCCTGATGCTGTT...GAGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GCCATGATGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAACCGCTTCTAGACAAATCAAAGTAGGCTTCTaGTTTCAACTTGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: AMMGCRQESGGLETASRQIKVGF*FQLGSH
Trigger: GTGAGATCCAAGTTGAAATCAGAAGCCTACTTTGAT...TTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GCTGCCTCTGAGGCTGTAGGACACGTCATTCAAACCTACCATCAAAGTAGGCTTGCCTTTCCTGTCGCTTaGATCATCTTTCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: AASEAVGHVIQTYHQSRLAFPVA*IIFPAL
Trigger: CAGAGCAGGAAAGATGATGCAAGCGACAGGAAAGGC...AAGCCTACTTTGATGGTAGGTTTGAATGACGTGTCCTACAGCCTCAGAGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR GCA 90 bp TATCGGTTTTCCCAACAGCATCAGGATTTGAGAGTGGGTCGAGGTCAGCGAAGATCTGAGATGGCCCGATaGCGAAAAGTCTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: YRFSQQHQDLRVGRGQRRSEMAR*RKVSTS
Trigger: AGAAGTGGAGACTTTTCGGCATCGGGCCATCTCAGA...TCTTCGCTGACCTCGACCCACTCTCAAATCCTGATGCTGTTGGGAAAACCGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR GCA 90 bp GGAGCAGGACCAATCATTAGACTCAAGTTCACCACAATTCATCTCCCAGGAACATCCTGCACTGTTCCATaGGGTTCACCGTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: GAGPIIRLKFTTIHLPGTSCTVP*GSPSAK
Trigger: CTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGA...TGTTCCTGGGAGATGAATTGTGGTGAACTTGAGTCTAATGATTGGTCCTGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR GCA 90 bp AGGCTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGAAGGGTACAGATTCATaGATTGAGCAATTCGTGTTC +
Preference number: 4 (lower is better)
Translates to: RLNQAVRSEAALAGSCSEKGTDS*IEQFVF
Trigger: GAACACGAATTGCTCAATGCATGAATCTGTACCCTT...CTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CCA 90 bp ATATTTTGGTCTAAAAGCTGCGAAGGAAGGAAACCTGAGCCTGTCTGGGCCTTGAAGGCCAACCTTTGCTaGGAAGAAAAGCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: IFWSKSCEGRKPEPVWALKANLC*EEKQRA
Trigger: GGCCCTCTGCTTTTCTTCCCAGCAAAGGTTGGCCTT...CAAGGCCCAGACAGGCTCAGGTTTCCTTCCTTCGCAGCTTTTAGACCAAAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CCA 90 bp GACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTTTCTAATGAAATTAATTaGCTCGGCTCCTGCACGGCT +
Preference number: 4 (lower is better)
Translates to: DSVFGWPELHPELTGRWLSNEIN*LGSCTA
Trigger: AGCCGTGCAGGAGCCGAGCCAATTAATTTCATTAGA...AAGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp AGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCTAATAGTTCATCTATaGGTCCTGAGCATGCAGTAT +
Preference number: 4 (lower is better)
Translates to: SSLEGGLAGRGNLPTALLLIVHL*VLSMQY
Trigger: ATACTGCATGCTCAGGACCCATAGATGAACTATTAG...GAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATAAGTCTTTCATATTTTaGTCTAAAAGCTGCGAAGGA +
Preference number: 4 (lower is better)
Translates to: ELLGAACECPPEGYRFMHKSFIF*SKSCEG
Trigger: TCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTT...ATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CCA 90 bp GGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGAAGTCTTTCATATTTTaGTCTAAAAGCTGCGAAGGA +
Preference number: 4 (lower is better)
Translates to: GRWLGRKRESSYSPPPRGKSFIF*SKSCEG
Trigger: TCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTT...CCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp CAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTCCACTGGAAGGTGGCTTaGCAGGAAGAGGGAATCTTC +
Preference number: 4 (lower is better)
Translates to: QIWLLSIVRFVPWTEAQLHWKVA*QEEGIF
Trigger: GAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTG...GAGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp ATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTCATCCAGAGCTCACTaGAAGGTGGCTTGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: IPATKRTKGDSGICKYGCSSRAH*KVAWQE
Trigger: TTCCTGCCAAGCCACCTTCCAGTGAGCTCTGGATGA...GCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp AGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCTGGTATCTGCAAATATaGCTGCTTTCCATAGTAAGG +
Preference number: 4 (lower is better)
Translates to: SSLEGGLAGRGNLPTALLWYLQI*LLSIVR
Trigger: CCTTACTATGGAAAGCAGCCATATTTGCAGATACCA...GAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp CAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTCTCTGGATCAAGCTCCTaGGACACGTCCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: QIWLLSIVRFVPWTEAQLSGSSS*DTSFIH
Trigger: ATGGATGAAGGACGTGTCTCAGGAGCTTGATCCAGA...GAGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GTGGAAAGAAGTGTGAGCTCCATCAGGGTCAAGGTTAGATTTTCTGAGAAGGGACAGTGGAAAGAAGTGTaGGCTCCATCAGGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: VERSVSSIRVKVRFSEKGQWKEV*APSGSR
Trigger: CCTTGACCCTGATGGAGCTCACACTTCTTTCCACTG...TCCCTTCTCAGAAAATCTAACCTTGACCCTGATGGAGCTCACACTTCTTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457755.5
CDS-3UTR GCA 90 bp CAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTCCGTAAGGCCAACCTTTaGTGGGAAGAAAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QIWLLSIVRFVPWTEAQLRKANL*WEEKQR
Trigger: CCTCTGCTTTTCTTCCCAGCAAAGGTTGGCCTTACG...GAGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp ATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTCTGAGATGGCCCGATaGCGAAAAGTCTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: IPATKRTKGDSGICKYGCSEMAR*RKVSTS
Trigger: AGAAGTGGAGACTTTTCGGCATCGGGCCATCTCAGA...GCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GATGGCCCGATGCCGAAAAGTCTCCACTTCTTGGTGAAATCGACACAAAGGATTTCTGAGATGGCCCGATaGCGAAAAGTCTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: DGPMPKSLHFLVKSTQRISEMAR*RKVSTS
Trigger: AGAAGTGGAGACTTTTCGGCATCGGGCCATCTCAGA...AATCCTTTGTGTCGATTTCACCAAGAAGTGGAGACTTTTCGGCATCGGGCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS-3UTR GCA 90 bp TATCGGTTTTCCCAACAGCATCAGGATTTGAGAGTGGGTCGAGGTCAGCGAAGACTCTATATTCCGTCCTaGACTGTTCCATGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: YRFSQQHQDLRVGRGQRRLYIPS*TVPCGS
Trigger: TGAACCGCATGGAACAGTGCAGGACGGAATATAGAG...TCTTCGCTGACCTCGACCCACTCTCAAATCCTGATGCTGTTGGGAAAACCGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR GCA 90 bp GGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTAAGGGTACAGATTCATaGATTGAGCAATTCGTGTTC +
Preference number: 4 (lower is better)
Translates to: GQCLWLARASSRAHWKVAKGTDS*IEQFVF
Trigger: GAACACGAATTGCTCAATGCATGAATCTGTACCCTT...AGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp GAGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTTTATCTTGGAAACCTTaGGATCGAAGAAATTTTCCC +
Preference number: 4 (lower is better)
Translates to: ELTGRWLGRKRESSYSPPLSWKP*DRRNFP
Trigger: GGGAAAATTTCTTCGATCCCAAGGTTTCCAAGATAA...AGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp CGCTTGCATCATCTTTCCTGCTCTGGTTTTATCTTGGAAACCTTGGGATCGAAGAAGGCCAACCTTTGCTaGGAAGAAAAGCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RLHHLSCSGFILETLGSKKANLC*EEKQRA
Trigger: GGCCCTCTGCTTTTCTTCCCAGCAAAGGTTGGCCTT...CTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGCAGGAAAGATGATGCAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS-3UTR CCA 90 bp GGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTCTAATAGTTCATCTATaGGTCCTGAGCATGCAGTAT +
Preference number: 4 (lower is better)
Translates to: GQCLWLARASSRAHWKVALIVHL*VLSMQY
Trigger: ATACTGCATGCTCAGGACCCATAGATGAACTATTAG...AGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp CGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTTTCCATAGTACTGGCTCCTTCACTTaGCCGTCTCCAAACACAGCG +
Preference number: 4 (lower is better)
Translates to: RRGQKETVVSANMAAFHSTGSFT*PSPNTA
Trigger: CGCTGTGTTTGGAGACGGCCAAGTGAAGGAGCCAGT...ACTATGGAAAGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp CAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTCGACAGTGTCTTTGGTTaGCCAGAGCTTCATCCAGAG +
Preference number: 4 (lower is better)
Translates to: QIWLLSIVRFVPWTEAQLDSVFG*PELHPE
Trigger: CTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTC...GAGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp TACATGCTTTTGAATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGACCAGGCACCTGCTGTaGGGACAGTGTCTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: YMLLNSSHEEDKRRQWYLTRHLL*GQCLWL
Trigger: CAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGT...CAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAATTCAAAAGCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp TGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGTATCTGCAAATATaGCTGCTTTCCATAGTAAGG +
Preference number: 4 (lower is better)
Translates to: CGDSVFGWPELHPELTGRWYLQI*LLSIVR
Trigger: CCTTACTATGGAAAGCAGCCATATTTGCAGATACCA...CCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GCTGCCTCTGAGGCTGTAGGACACGTCATTCAAACCTACCATCAAAGTAGGCTTTTCATCTATGGGTCCTaGGCATGCAGTATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: AASEAVGHVIQTYHQSRLFIYGS*ACSMCR
Trigger: TCTACACATACTGCATGCTCAGGACCCATAGATGAA...AAGCCTACTTTGATGGTAGGTTTGAATGACGTGTCCTACAGCCTCAGAGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR TCA 90 bp GACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTTATCAAAGTAGGCTTCTaGTTTCAACTTGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: DSVFGWPELHPELTGRWLIKVGF*FQLGSH
Trigger: GTGAGATCCAAGTTGAAATCAGAAGCCTACTTTGAT...AAGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp GACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTTGCTTTAATAAAGGCCTaGTTCGTCTCCCAATATTTC +
Preference number: 4 (lower is better)
Translates to: DSVFGWPELHPELTGRWLALIKA*FVSQYF
Trigger: GAAATATTGGGAGACGAAGCAGGCCTTTATTAAAGC...AAGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp ATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCCTCTATATTCCGTCCTaGACTGTTCCATGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: IPATKRTKGDSGICKYGCLYIPS*TVPCGS
Trigger: TGAACCGCATGGAACAGTGCAGGACGGAATATAGAG...GCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp TATCGGTTTTCCCAACAGCATCAGGATTTGAGAGTGGGTCGAGGTCAGCGAAGAACAAGAGATTGCATCTaGTCGCTCCAAGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: YRFSQQHQDLRVGRGQRRTRDCI*SLQEDP
Trigger: TGGATCTTCTTGGAGCGAGCAGATGCAATCTCTTGT...TCTTCGCTGACCTCGACCCACTCTCAAATCCTGATGCTGTTGGGAAAACCGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR GCA 90 bp GCTGCCTCTGAGGCTGTAGGACACGTCATTCAAACCTACCATCAAAGTAGGCTTTGTGAGACAAGAGATTaGATCTGCTCGCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: AASEAVGHVIQTYHQSRLCETRD*ICSLQE
Trigger: TTCTTGGAGCGAGCAGATGCAATCTCTTGTCTCACA...AAGCCTACTTTGATGGTAGGTTTGAATGACGTGTCCTACAGCCTCAGAGGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR CCA 90 bp GGAGCAGGACCAATCATTAGACTCAAGTTCACCACAATTCATCTCCCAGGAACAGCCAAGTATCTGAGATaGCCCGATGCCGAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: GAGPIIRLKFTTIHLPGTAKYLR*PDAEKS
Trigger: AGACTTTTCGGCATCGGGCCATCTCAGATACTTGGC...TGTTCCTGGGAGATGAATTGTGGTGAACTTGAGTCTAATGATTGGTCCTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR CCA 90 bp GCTGCCTCTGAGGCTGTAGGACACGTCATTCAAACCTACCATCAAAGTAGGCTTTCTAATGAAATTAATTaGCTCGGCTCCTGCACGGCT +
Preference number: 4 (lower is better)
Translates to: AASEAVGHVIQTYHQSRLSNEIN*LGSCTA
Trigger: AGCCGTGCAGGAGCCGAGCCAATTAATTTCATTAGA...AAGCCTACTTTGATGGTAGGTTTGAATGACGTGTCCTACAGCCTCAGAGGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR CCA 90 bp GAGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTAAGTCTTTCATATTTTaGTCTAAAAGCTGCGAAGGA +
Preference number: 4 (lower is better)
Translates to: ELTGRWLGRKRESSYSPPKSFIF*SKSCEG
Trigger: TCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTT...AGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp TACATGCTTTTGAATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCACTGGAAGGTGGCTTaGCAGGAAGAGGGAATCTTC +
Preference number: 4 (lower is better)
Translates to: YMLLNSSHEEDKRRQWYLHWKVA*QEEGIF
Trigger: GAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTG...CAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAATTCAAAAGCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GCTGCCTCTGAGGCTGTAGGACACGTCATTCAAACCTACCATCAAAGTAGGCTTGTGTTTGTACCTTCCTaGACTTCTCCATTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: AASEAVGHVIQTYHQSRLVFVPS*TSPFAC
Trigger: ACAAGCAAATGGAGAAGTTCAGGAAGGTACAAACAC...AAGCCTACTTTGATGGTAGGTTTGAATGACGTGTCCTACAGCCTCAGAGGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR TCA 90 bp CAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTCTTCATCTATGGGTCCTaGGCATGCAGTATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: QIWLLSIVRFVPWTEAQLFIYGS*ACSMCR
Trigger: TCTACACATACTGCATGCTCAGGACCCATAGATGAA...GAGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp AAGTCTTTCATATTTTGGTCTAAAAGCTGCGAAGGAAGGAAACCTGAGCCTGTCAACAGCATCAGGATTTaGGAGTGGGTCGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: KSFIFWSKSCEGRKPEPVNSIRI*EWVEVS
Trigger: GCTGACCTCGACCCACTCTCAAATCCTGATGCTGTT...GACAGGCTCAGGTTTCCTTCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR GCA 90 bp GGAGCAGGACCAATCATTAGACTCAAGTTCACCACAATTCATCTCCCAGGAACACTCTATATTCCGTCCTaGACTGTTCCATGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: GAGPIIRLKFTTIHLPGTLYIPS*TVPCGS
Trigger: TGAACCGCATGGAACAGTGCAGGACGGAATATAGAG...TGTTCCTGGGAGATGAATTGTGGTGAACTTGAGTCTAATGATTGGTCCTGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR GCA 90 bp ATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCACAAGAGATTGCATCTaGTCGCTCCAAGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: IPATKRTKGDSGICKYGCTRDCI*SLQEDP
Trigger: TGGATCTTCTTGGAGCGAGCAGATGCAATCTCTTGT...GCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp TTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTGGAGACAGTGGTATCTaGAAATATGGCTGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: FQPRRGQKETVVSANMAAGDSGI*KYGCFP
Trigger: TGGAAAGCAGCCATATTTGCAGATACCACTGTCTCC...AGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp TTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTAGTCCCAGGGATAACTaGATTTGTGTCCTGACATGT +
Preference number: 4 (lower is better)
Translates to: FQPRRGQKETVVSANMAASPRDN*ICVLTC
Trigger: ACATGTCAGGACACAAATGCAGTTATCCCTGGGACT...AGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp ATATTTTGGTCTAAAAGCTGCGAAGGAAGGAAACCTGAGCCTGTCTGGGCCTTGAGTCCCAGGGATAACTaGATTTGTGTCCTGACATGT +
Preference number: 4 (lower is better)
Translates to: IFWSKSCEGRKPEPVWALSPRDN*ICVLTC
Trigger: ACATGTCAGGACACAAATGCAGTTATCCCTGGGACT...CAAGGCCCAGACAGGCTCAGGTTTCCTTCCTTCGCAGCTTTTAGACCAAAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CCA 90 bp ATCATTAGACTCAAGTTCACCACAATTCATCTCCCAGGAACATGTATCTCAAGGGAAACAGCTCTAGCTTaGCATCCAGGTCCGCGTCAG +
Preference number: 4 (lower is better)
Translates to: IIRLKFTTIHLPGTCISRETALA*HPGPRQ
Trigger: CTGACGCGGACCTGGATGCCAAGCTAGAGCTGTTTC...CCTTGAGATACATGTTCCTGGGAGATGAATTGTGGTGAACTTGAGTCTAATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR CCA 90 bp GCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAAAGTCTTTCATATTTTaGTCTAAAAGCTGCGAAGGA +
Preference number: 4 (lower is better)
Translates to: AVGTVSLVGQSFIQSSLEKSFIF*SKSCEG
Trigger: TCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTT...TTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GCTGCCTCTGAGGCTGTAGGACACGTCATTCAAACCTACCATCAAAGTAGGCTTACAACTGACTTATCTTaGGCATATCGATCCTGTAAG +
Preference number: 4 (lower is better)
Translates to: AASEAVGHVIQTYHQSRLTTDLS*AYRSCK
Trigger: CTTACAGGATCGATATGCTCAAGATAAGTCAGTTGT...AAGCCTACTTTGATGGTAGGTTTGAATGACGTGTCCTACAGCCTCAGAGGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR TCA 90 bp ATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCGTCTCCACTTCTTGGTaGAATCGACACAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: IPATKRTKGDSGICKYGCVSTSW*NRHKGF
Trigger: AAATCCTTTGTGTCGATTTCACCAAGAAGTGGAGAC...GCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GCAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTGTCTCCACTTCTTGGTaGAATCGACACAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: ANMAAFHSKVCALDRSPAVSTSW*NRHKGF
Trigger: AAATCCTTTGTGTCGATTTCACCAAGAAGTGGAGAC...AGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp ATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCGTGTTTGTACCTTCCTaGACTTCTCCATTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: IPATKRTKGDSGICKYGCVFVPS*TSPFAC
Trigger: ACAAGCAAATGGAGAAGTTCAGGAAGGTACAAACAC...GCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp CTGAGTTTATGGGACTTGTACAATCTCCCCTTTAGCAATGTCAAACAAGTATTTCGGGGACTCGGGGAGTaGGTTTCTCTCTCTCTACTC +
Preference number: 4 (lower is better)
Translates to: LSLWDLYNLPFSNVKQVFRGLGE*VSLSLL
Trigger: GAGTAGAGAGAGAGAAACTCACTCCCCGAGTCCCCG...AAATACTTGTTTGACATTGCTAAAGGGGAGATTGTACAAGTCCCATAAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR TCA 90 bp GTGGAAAGAAGTGTGAGCTCCATCAGGGTCAAGGTTAGATTTTCTGAGAAGGGAAGTTCGTTTTCTTCTTaGGACAAGATCAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VERSVSSIRVKVRFSEKGSSFSS*DKIRGQ
Trigger: CTGCCCTCTGATCTTGTCTCAAGAAGAAAACGAACT...TCCCTTCTCAGAAAATCTAACCTTGACCCTGATGGAGCTCACACTTCTTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457755.5
CDS-3UTR GCA 90 bp TATCGGTTTTCCCAACAGCATCAGGATTTGAGAGTGGGTCGAGGTCAGCGAAGAAAGGGTACAGATTCATaGATTGAGCAATTCGTGTTC +
Preference number: 4 (lower is better)
Translates to: YRFSQQHQDLRVGRGQRRKGTDS*IEQFVF
Trigger: GAACACGAATTGCTCAATGCATGAATCTGTACCCTT...TCTTCGCTGACCTCGACCCACTCTCAAATCCTGATGCTGTTGGGAAAACCGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR GCA 90 bp GTGGAAAGAAGTGTGAGCTCCATCAGGGTCAAGGTTAGATTTTCTGAGAAGGGAAGTCCCAGGGATAACTaGATTTGTGTCCTGACATGT +
Preference number: 4 (lower is better)
Translates to: VERSVSSIRVKVRFSEKGSPRDN*ICVLTC
Trigger: ACATGTCAGGACACAAATGCAGTTATCCCTGGGACT...TCCCTTCTCAGAAAATCTAACCTTGACCCTGATGGAGCTCACACTTCTTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457755.5
CDS-3UTR CCA 90 bp CTCCTCTATATTCCGTCCTGCACTGTTCCATGCGGTTCACCGTCAGCCAAGTATTTATCTTGGAAACCTTaGGATCGAAGAAATTTTCCC +
Preference number: 4 (lower is better)
Translates to: LLYIPSCTVPCGSPSAKYLSWKP*DRRNFP
Trigger: GGGAAAATTTCTTCGATCCCAAGGTTTCCAAGATAA...ATACTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGACGGAATATAGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS-3UTR CCA 90 bp ATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCGCTCTGGTTTTATCTTaGAAACCTTGGGATCGAAGA +
Preference number: 4 (lower is better)
Translates to: IPATKRTKGDSGICKYGCALVLS*KPWDRR
Trigger: TCTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGC...GCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp TTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTGCTCTGGTTTTATCTTaGAAACCTTGGGATCGAAGA +
Preference number: 4 (lower is better)
Translates to: FQPRRGQKETVVSANMAAALVLS*KPWDRR
Trigger: TCTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGC...AGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp AAGTCTTTCATATTTTGGTCTAAAAGCTGCGAAGGAAGGAAACCTGAGCCTGTCGCCAAGTATCTGAGATaGCCCGATGCCGAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: KSFIFWSKSCEGRKPEPVAKYLR*PDAEKS
Trigger: AGACTTTTCGGCATCGGGCCATCTCAGATACTTGGC...GACAGGCTCAGGTTTCCTTCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CCA 90 bp GCTGCCTCTGAGGCTGTAGGACACGTCATTCAAACCTACCATCAAAGTAGGCTTTGGTATCTGCAAATATaGCTGCTTTCCATAGTAAGG +
Preference number: 4 (lower is better)
Translates to: AASEAVGHVIQTYHQSRLWYLQI*LLSIVR
Trigger: CCTTACTATGGAAAGCAGCCATATTTGCAGATACCA...AAGCCTACTTTGATGGTAGGTTTGAATGACGTGTCCTACAGCCTCAGAGGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
CDS-3UTR CCA 90 bp ATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCGACAAAAGGAGACAGTaGTATCTGCAAATATGGCTG +
Preference number: 4 (lower is better)
Translates to: IPATKRTKGDSGICKYGCDKRRQ*YLQIWL
Trigger: CAGCCATATTTGCAGATACCACTGTCTCCTTTTGTC...GCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp CAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTCACAACTGACTTATCTTaGGCATATCGATCCTGTAAG +
Preference number: 4 (lower is better)
Translates to: QIWLLSIVRFVPWTEAQLTTDLS*AYRSCK
Trigger: CTTACAGGATCGATATGCTCAAGATAAGTCAGTTGT...GAGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp CAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTCGCTTTAATAAAGGCCTaGTTCGTCTCCCAATATTTC +
Preference number: 4 (lower is better)
Translates to: QIWLLSIVRFVPWTEAQLALIKA*FVSQYF
Trigger: GAAATATTGGGAGACGAAGCAGGCCTTTATTAAAGC...GAGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp TACATGCTTTTGAATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGACAAGAGATTGCATCTaGTCGCTCCAAGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: YMLLNSSHEEDKRRQWYLTRDCI*SLQEDP
Trigger: TGGATCTTCTTGGAGCGAGCAGATGCAATCTCTTGT...CAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAATTCAAAAGCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp TATCGGTTTTCCCAACAGCATCAGGATTTGAGAGTGGGTCGAGGTCAGCGAAGATTATCTTGGAAACCTTaGGATCGAAGAAATTTTCCC +
Preference number: 4 (lower is better)
Translates to: YRFSQQHQDLRVGRGQRRLSWKP*DRRNFP
Trigger: GGGAAAATTTCTTCGATCCCAAGGTTTCCAAGATAA...TCTTCGCTGACCTCGACCCACTCTCAAATCCTGATGCTGTTGGGAAAACCGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CCA 90 bp CGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTTTCCATAGTTCTAATGAAATTAATTaGCTCGGCTCCTGCACGGCT +
Preference number: 4 (lower is better)
Translates to: RRGQKETVVSANMAAFHSSNEIN*LGSCTA
Trigger: AGCCGTGCAGGAGCCGAGCCAATTAATTTCATTAGA...ACTATGGAAAGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR TCA 90 bp GTAAGAGAGGAAAGGAGGACACCTTCTCAAGTGAGGATATTTGAATATAATAATCGTCAGCCAAGTATCTaGGATGGCCCGATGCCGAAA +
Preference number: 4 (lower is better)
Translates to: VREERRTPSQVRIFEYNNRQPSI*DGPMPK
Trigger: TTTCGGCATCGGGCCATCTCAGATACTTGGCTGACG...ATTATTATATTCAAATATCCTCACTTGAGAAGGTGTCCTCCTTTCCTCTCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR TCA 90 bp TACATGCTTTTGAATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGGTGTTTGTACCTTCCTaGACTTCTCCATTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: YMLLNSSHEEDKRRQWYLVFVPS*TSPFAC
Trigger: ACAAGCAAATGGAGAAGTTCAGGAAGGTACAAACAC...CAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAATTCAAAAGCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp AAGTCTTTCATATTTTGGTCTAAAAGCTGCGAAGGAAGGAAACCTGAGCCTGTCTGTGAGACAAGAGATTaGATCTGCTCGCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: KSFIFWSKSCEGRKPEPVCETRD*ICSLQE
Trigger: TTCTTGGAGCGAGCAGATGCAATCTCTTGTCTCACA...GACAGGCTCAGGTTTCCTTCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR GCA 90 bp ATCATTAGACTCAAGTTCACCACAATTCATCTCCCAGGAACATGTATCTCAAGGGAAAGAAAAAGACTCTaGTGGGGGCACAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: IIRLKFTTIHLPGTCISRERKRL*WGHSSL
Trigger: GAGAGAACTGTGCCCCCAGCAGAGTCTTTTTCTTTC...CCTTGAGATACATGTTCCTGGGAGATGAATTGTGGTGAACTTGAGTCTAATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR CCA 90 bp CAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTCTTATCTTGGAAACCTTaGGATCGAAGAAATTTTCCC +
Preference number: 4 (lower is better)
Translates to: QIWLLSIVRFVPWTEAQLLSWKP*DRRNFP
Trigger: GGGAAAATTTCTTCGATCCCAAGGTTTCCAAGATAA...GAGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp TTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTTTATCTTGGAAACCTTaGGATCGAAGAAATTTTCCC +
Preference number: 4 (lower is better)
Translates to: FQPRRGQKETVVSANMAALSWKP*DRRNFP
Trigger: GGGAAAATTTCTTCGATCCCAAGGTTTCCAAGATAA...AGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CCA 90 bp CTGAGTTTATGGGACTTGTACAATCTCCCCTTTAGCAATGTCAAACAAGTATTTAAGGCCAACCTTTGCTaGGAAGAAAAGCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LSLWDLYNLPFSNVKQVFKANLC*EEKQRA
Trigger: GGCCCTCTGCTTTTCTTCCCAGCAAAGGTTGGCCTT...AAATACTTGTTTGACATTGCTAAAGGGGAGATTGTACAAGTCCCATAAACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR TCA 90 bp TACATGCTTTTGAATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGATCAAAGTAGGCTTCTaGTTTCAACTTGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: YMLLNSSHEEDKRRQWYLIKVGF*FQLGSH
Trigger: GTGAGATCCAAGTTGAAATCAGAAGCCTACTTTGAT...CAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAATTCAAAAGCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR GCA 90 bp CTGAGTTTATGGGACTTGTACAATCTCCCCTTTAGCAATGTCAAACAAGTATTTGCCTTTCCTGTCGCTTaGATCATCTTTCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LSLWDLYNLPFSNVKQVFAFPVA*IIFPAL
Trigger: CAGAGCAGGAAAGATGATGCAAGCGACAGGAAAGGC...AAATACTTGTTTGACATTGCTAAAGGGGAGATTGTACAAGTCCCATAAACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR GCA 90 bp CTGAGTTTATGGGACTTGTACAATCTCCCCTTTAGCAATGTCAAACAAGTATTTTCTGAGATGGCCCGATaGCGAAAAGTCTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: LSLWDLYNLPFSNVKQVFSEMAR*RKVSTS
Trigger: AGAAGTGGAGACTTTTCGGCATCGGGCCATCTCAGA...AAATACTTGTTTGACATTGCTAAAGGGGAGATTGTACAAGTCCCATAAACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR CCA 90 bp AAGTCTTTCATATTTTGGTCTAAAAGCTGCGAAGGAAGGAAACCTGAGCCTGTCGCTCTGGTTTTATCTTaGAAACCTTGGGATCGAAGA +
Preference number: 4 (lower is better)
Translates to: KSFIFWSKSCEGRKPEPVALVLS*KPWDRR
Trigger: TCTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGC...GACAGGCTCAGGTTTCCTTCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CCA 90 bp GTAAGAGAGGAAAGGAGGACACCTTCTCAAGTGAGGATATTTGAATATAATAATTATTATAACCTTGCTTaGGGAGGGTCGGGGACTCGG +
Preference number: 4 (lower is better)
Translates to: VREERRTPSQVRIFEYNNYYNLA*GGSGTR
Trigger: CCGAGTCCCCGACCCTCCCCAAGCAAGGTTATAATA...ATTATTATATTCAAATATCCTCACTTGAGAAGGTGTCCTCCTTTCCTCTCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407906.5
3UTR CAA 72 bp AAACAATGTCACAAGAGGCTTCAGAAATACATGCTTTaGAATTCCAGCCACGAAGAGGACAAAAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: KQCHKRLQKYML*NSSHEEDKRRQ
Trigger: CTGTCTCCTTTTGTCCTCTTCGTGGCTGGAATTCAAAAGCATGTATTTCTGAAGCCTCTTGTGACATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402384.8
ENST00000406470.6
CDS-3UTR TCA 90 bp ATCATTAGACTCAAGTTCACCACAATTCATCTCCCAGGAACATGTATCTCAAGGGTCTCCACTTCTTGGTaGAATCGACACAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: IIRLKFTTIHLPGTCISRVSTSW*NRHKGF
Trigger: AAATCCTTTGTGTCGATTTCACCAAGAAGTGGAGAC...CCTTGAGATACATGTTCCTGGGAGATGAATTGTGGTGAACTTGAGTCTAATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR TCA 90 bp GTAAGAGAGGAAAGGAGGACACCTTCTCAAGTGAGGATATTTGAATATAATAATTCTGGATCAAGCTCCTaGGACACGTCCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: VREERRTPSQVRIFEYNNSGSSS*DTSFIH
Trigger: ATGGATGAAGGACGTGTCTCAGGAGCTTGATCCAGA...ATTATTATATTCAAATATCCTCACTTGAGAAGGTGTCCTCCTTTCCTCTCTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR GCA 90 bp GTAAGAGAGGAAAGGAGGACACCTTCTCAAGTGAGGATATTTGAATATAATAATCGTAAGGCCAACCTTTaGTGGGAAGAAAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VREERRTPSQVRIFEYNNRKANL*WEEKQR
Trigger: CCTCTGCTTTTCTTCCCAGCAAAGGTTGGCCTTACG...ATTATTATATTCAAATATCCTCACTTGAGAAGGTGTCCTCCTTTCCTCTCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR CCA 90 bp AAGTCTTTCATATTTTGGTCTAAAAGCTGCGAAGGAAGGAAACCTGAGCCTGTCCTAATAGTTCATCTATaGGTCCTGAGCATGCAGTAT +
Preference number: 4 (lower is better)
Translates to: KSFIFWSKSCEGRKPEPVLIVHL*VLSMQY
Trigger: ATACTGCATGCTCAGGACCCATAGATGAACTATTAG...GACAGGCTCAGGTTTCCTTCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS-3UTR CCA 90 bp GAAAGAAGTGTGAGCTCCATCAGGGTCAAGGTTAGATTTTCTGAGAAGGGATGGTTTTCTGAGAAGGGATaGTCATTAACATATCCTCTT +
Preference number: 4 (lower is better)
Translates to: ERSVSSIRVKVRFSEKGWFSEKG*SLTYPL
Trigger: AAGAGGATATGTTAATGACCATCCCTTCTCAGAAAA...CCATCCCTTCTCAGAAAATCTAACCTTGACCCTGATGGAGCTCACACTTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457755.5
CDS-3UTR TCA 90 bp AAGTCTTTCATATTTTGGTCTAAAAGCTGCGAAGGAAGGAAACCTGAGCCTGTCCTTGGCCTCCTAAAATaGACATATCCTCTTTTGATA +
Preference number: 4 (lower is better)
Translates to: KSFIFWSKSCEGRKPEPVLGLLK*TYPLLI
Trigger: TATCAAAAGAGGATATGTTCATTTTAGGAGGCCAAG...GACAGGCTCAGGTTTCCTTCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS-3UTR GCA 90 bp CTGAGTTTATGGGACTTGTACAATCTCCCCTTTAGCAATGTCAAACAAGTATTTAGTCCCAGGGATAACTaGATTTGTGTCCTGACATGT +
Preference number: 4 (lower is better)
Translates to: LSLWDLYNLPFSNVKQVFSPRDN*ICVLTC
Trigger: ACATGTCAGGACACAAATGCAGTTATCCCTGGGACT...AAATACTTGTTTGACATTGCTAAAGGGGAGATTGTACAAGTCCCATAAACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR CCA 90 bp GTAAGAGAGGAAAGGAGGACACCTTCTCAAGTGAGGATATTTGAATATAATAATAGAAAAAGACTCTGCTaGGGGCACAGTTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: VREERRTPSQVRIFEYNNRKRLC*GHSSLF
Trigger: GAAGAGAGAACTGTGCCCCCAGCAGAGTCTTTTTCT...ATTATTATATTCAAATATCCTCACTTGAGAAGGTGTCCTCCTTTCCTCTCTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR GCA 90 bp GTAAGAGAGGAAAGGAGGACACCTTCTCAAGTGAGGATATTTGAATATAATAATACAAGAGATTGCATCTaGTCGCTCCAAGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: VREERRTPSQVRIFEYNNTRDCI*SLQEDP
Trigger: TGGATCTTCTTGGAGCGAGCAGATGCAATCTCTTGT...ATTATTATATTCAAATATCCTCACTTGAGAAGGTGTCCTCCTTTCCTCTCTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR GCA 90 bp GTAAGAGAGGAAAGGAGGACACCTTCTCAAGTGAGGATATTTGAATATAATAATTGTGAGACAAGAGATTaGATCTGCTCGCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: VREERRTPSQVRIFEYNNCETRD*ICSLQE
Trigger: TTCTTGGAGCGAGCAGATGCAATCTCTTGTCTCACA...ATTATTATATTCAAATATCCTCACTTGAGAAGGTGTCCTCCTTTCCTCTCTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR GCA 90 bp ATCATTAGACTCAAGTTCACCACAATTCATCTCCCAGGAACATGTATCTCAAGGTTCGCGCTTTTGGATTaGAGTAGATTCTCATTGTAT +
Preference number: 4 (lower is better)
Translates to: IIRLKFTTIHLPGTCISRFALLD*SRFSLY
Trigger: ATACAATGAGAATCTACTGCAATCCAAAAGCGCGAA...CCTTGAGATACATGTTCCTGGGAGATGAATTGTGGTGAACTTGAGTCTAATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR CCA 90 bp CTGAGTTTATGGGACTTGTACAATCTCCCCTTTAGCAATGTCAAACAAGTATTTGCTCTGGTTTTATCTTaGAAACCTTGGGATCGAAGA +
Preference number: 4 (lower is better)
Translates to: LSLWDLYNLPFSNVKQVFALVLS*KPWDRR
Trigger: TCTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGC...AAATACTTGTTTGACATTGCTAAAGGGGAGATTGTACAAGTCCCATAAACTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR TCA 90 bp GTAAGAGAGGAAAGGAGGACACCTTCTCAAGTGAGGATATTTGAATATAATAATGTGTTTGTACCTTCCTaGACTTCTCCATTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: VREERRTPSQVRIFEYNNVFVPS*TSPFAC
Trigger: ACAAGCAAATGGAGAAGTTCAGGAAGGTACAAACAC...ATTATTATATTCAAATATCCTCACTTGAGAAGGTGTCCTCCTTTCCTCTCTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR CCA 90 bp CTGAGTTTATGGGACTTGTACAATCTCCCCTTTAGCAATGTCAAACAAGTATTTTTATCTTGGAAACCTTaGGATCGAAGAAATTTTCCC +
Preference number: 4 (lower is better)
Translates to: LSLWDLYNLPFSNVKQVFLSWKP*DRRNFP
Trigger: GGGAAAATTTCTTCGATCCCAAGGTTTCCAAGATAA...AAATACTTGTTTGACATTGCTAAAGGGGAGATTGTACAAGTCCCATAAACTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR CCA 90 bp GTAAGAGAGGAAAGGAGGACACCTTCTCAAGTGAGGATATTTGAATATAATAATTTCAATTCGCGCTTTTaGATTGCAGTAGATTCTCAT +
Preference number: 4 (lower is better)
Translates to: VREERRTPSQVRIFEYNNFNSRF*IAVDSH
Trigger: ATGAGAATCTACTGCAATCCAAAAGCGCGAATTGAA...ATTATTATATTCAAATATCCTCACTTGAGAAGGTGTCCTCCTTTCCTCTCTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS GCA 90 bp CCCCGCCCCTGCTCTCCGGCAGGTGTTCCACGTGGCCATAGCGTTTaGGTCACAATGACCTGGCGGACAGGTGGGAGCCACAGCGTACAC +
Preference number: 5 (lower is better)
Translates to: PRPCSPAGVPRGHSV*VTMTWRTGGSHSVH
Trigger: GTGTACGCTGTGGCTCCCACCTGTCCGCCAGGTCATTGTGACGCAAACGCTATGGCCACGTGGAACACCTGCCGGAGAGCAGGGGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446305.1
CDS CCA 90 bp CCGGCAGGTGTTCCACGTGGCCATAGCGTTTGCGTCACAATGACCTaGCGGACAGGTGGGAGCCACAGCGTACACCCCAGGGTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: PAGVPRGHSVCVTMT*RTGGSHSVHPRVPS
Trigger: AGAGGGAACCCTGGGGTGTACGCTGTGGCTCCCACCTGTCCGCCAGGTCATTGTGACGCAAACGCTATGGCCACGTGGAACACCTGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446305.1
CDS-3UTR CAA 90 bp GAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATACAGCGGCCCACTCTTaGCTGAACTCGCCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: ELLGAACECPPEGYRFMHTAAHS*LNSPSS
Trigger: GGAAGAGGGCGAGTTCAGCAAAGAGTGGGCCGCTGT...ATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp GAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGCACTGGCTCCTTCACTaGGCCGTCTCCAAACACAGC +
Preference number: 5 (lower is better)
Translates to: EHVAHQAPAVGTVSLVGQHWLLH*AVSKHS
Trigger: GCTGTGTTTGGAGACGGCCAAGTGAAGGAGCCAGTG...CTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp TCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTCACTGGCTCCTTCACTaGGCCGTCTCCAAACACAGC +
Preference number: 5 (lower is better)
Translates to: SSTSVRTRGPPGTCCGDSHWLLH*AVSKHS
Trigger: GCTGTGTTTGGAGACGGCCAAGTGAAGGAGCCAGTG...ACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAACAGCGGCCCACTCTTaGCTGAACTCGCCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: VAWQEEGIFLQPSSKGDRTAAHS*LNSPSS
Trigger: GGAAGAGGGCGAGTTCAGCAAAGAGTGGGCCGCTGT...TCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp CACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCCAACAGCATCAGGATTaGAGAGTGGGTCGAGGTCAG +
Preference number: 5 (lower is better)
Translates to: HVAHQAPAVGTVSLVGQSQQHQD*RVGRGQ
Trigger: CTGACCTCGACCCACTCTCAAATCCTGATGCTGTTG...GCTCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp TCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGGCCTTTCCTGTCGCTaGCATCATCTTTCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SSTSVRTRGPPGTCCGDSGLSCR*HHLSCS
Trigger: AGAGCAGGAAAGATGATGCAAGCGACAGGAAAGGCC...ACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGCAGCAGGTCATCTTaGTCAGCACCTTCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: ENTWPTRHLLWGQCLWLASSRSS*SAPSGS
Trigger: GGAACCTGAAGGTGCTGACAAAGATGACCTGCTGCT...GGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp TCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTAGCAGCAGGTCATCTTaGTCAGCACCTTCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: SSTSVRTRGPPGTCCGDSSSRSS*SAPSGS
Trigger: GGAACCTGAAGGTGCTGACAAAGATGACCTGCTGCT...ACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GAGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTACAGCGGCCCACTCTTaGCTGAACTCGCCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: ELTGRWLGRKRESSYSPPTAAHS*LNSPSS
Trigger: GGAAGAGGGCGAGTTCAGCAAAGAGTGGGCCGCTGT...AGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp CTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGGCCCACTGGCTCCTTCACTaGGCCGTCTCCAAACACAGC +
Preference number: 5 (lower is better)
Translates to: LNQAVRSEAALAGSCSEAHWLLH*AVSKHS
Trigger: GCTGTGTTTGGAGACGGCCAAGTGAAGGAGCCAGTG...GGCCTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp CACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCGCTTCTGATTTCAACTaGGATCTCACGGTAGCCCAG +
Preference number: 5 (lower is better)
Translates to: HVAHQAPAVGTVSLVGQSASDFN*DLTVAQ
Trigger: CTGGGCTACCGTGAGATCCAAGTTGAAATCAGAAGC...GCTCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAGGGTGGGGACAGTGTCTTaGGTTGGCCAGAGCTTCATC +
Preference number: 5 (lower is better)
Translates to: GLAGRGNLPTALLQGGQRVGTVS*VGQSFI
Trigger: GATGAAGCTCTGGCCAACCAAAGACACTGTCCCCAC...CCTCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATGGCCTTTCCTGTCGCTaGCATCATCTTTCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: ELLGAACECPPEGYRFMHGLSCR*HHLSCS
Trigger: AGAGCAGGAAAGATGATGCAAGCGACAGGAAAGGCC...ATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp CACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCAAGGCGCACTTGTGTTaGTACCTTCCTGAACTTCTC +
Preference number: 5 (lower is better)
Translates to: HVAHQAPAVGTVSLVGQSKAHLC*YLPELL
Trigger: GAGAAGTTCAGGAAGGTACAAACACAAGTGCGCCTT...GCTCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATAGCAGCAGGTCATCTTaGTCAGCACCTTCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: ELLGAACECPPEGYRFMHSSRSS*SAPSGS
Trigger: GGAACCTGAAGGTGCTGACAAAGATGACCTGCTGCT...ATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp AGGCTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGCACTGGCTCCTTCACTaGGCCGTCTCCAAACACAGC +
Preference number: 5 (lower is better)
Translates to: RLNQAVRSEAALAGSCSEHWLLH*AVSKHS
Trigger: GCTGTGTTTGGAGACGGCCAAGTGAAGGAGCCAGTG...CTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp GCCATGATGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAACCGCTTCTAGACAACACTGGCTCCTTCACTaGGCCGTCTCCAAACACAGC +
Preference number: 5 (lower is better)
Translates to: AMMGCRQESGGLETASRQHWLLH*AVSKHS
Trigger: GCTGTGTTTGGAGACGGCCAAGTGAAGGAGCCAGTG...TTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGACAACAGCATCAGGATTaGAGAGTGGGTCGAGGTCAG +
Preference number: 5 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARQQHQD*RVGRGQ
Trigger: CTGACCTCGACCCACTCTCAAATCCTGATGCTGTTG...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAGGCAACAGCATCAGGATTaGAGAGTGGGTCGAGGTCAG +
Preference number: 5 (lower is better)
Translates to: GLAGRGNLPTALLQGGQRQQHQD*RVGRGQ
Trigger: CTGACCTCGACCCACTCTCAAATCCTGATGCTGTTG...CCTCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATCAACAGCATCAGGATTaGAGAGTGGGTCGAGGTCAG +
Preference number: 5 (lower is better)
Translates to: ELLGAACECPPEGYRFMHQQHQD*RVGRGQ
Trigger: CTGACCTCGACCCACTCTCAAATCCTGATGCTGTTG...ATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp TCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGCTTCTGATTTCAACTaGGATCTCACGGTAGCCCAG +
Preference number: 5 (lower is better)
Translates to: SSTSVRTRGPPGTCCGDSASDFN*DLTVAQ
Trigger: CTGGGCTACCGTGAGATCCAAGTTGAAATCAGAAGC...ACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGGACAGTGTCTTTGGTaGGCCAGAGCTTCATCCAGA +
Preference number: 5 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARGQCLW*ARASSR
Trigger: TCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAGTGGGGACAGTGTCTTaGGTTGGCCAGAGCTTCATC +
Preference number: 5 (lower is better)
Translates to: VAWQEEGIFLQPSSKGDRVGTVS*VGQSFI
Trigger: GATGAAGCTCTGGCCAACCAAAGACACTGTCCCCAC...TCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp TGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGGGCCTTTCCTGTCGCTaGCATCATCTTTCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: CWGRHVSALPKGTDSCIEGLSCR*HHLSCS
Trigger: AGAGCAGGAAAGATGATGCAAGCGACAGGAAAGGCC...CTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp GAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAAGGCGCACTTGTGTTaGTACCTTCCTGAACTTCTC +
Preference number: 5 (lower is better)
Translates to: ENTWPTRHLLWGQCLWLAKAHLC*YLPELL
Trigger: GAGAAGTTCAGGAAGGTACAAACACAAGTGCGCCTT...GGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp CAGAAGCCCAGCTCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCAAACTAGAGGATTCCTaGCGCTGGTTTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: QKPSSSTSVRTRGPPGTCKLEDS*RWFSSS
Trigger: AGAGGAAGAAAACCAGCGCAAGGAATCCTCTAGTTT...GCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGCTGGGCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTCACTGGCTCCTTCACTaGGCCGTCTCCAAACACAGC +
Preference number: 5 (lower is better)
Translates to: GQCLWLARASSRAHWKVAHWLLH*AVSKHS
Trigger: GCTGTGTTTGGAGACGGCCAAGTGAAGGAGCCAGTG...AGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp TGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGCACTGGCTCCTTCACTaGGCCGTCTCCAAACACAGC +
Preference number: 5 (lower is better)
Translates to: CGDSVFGWPELHPELTGRHWLLH*AVSKHS
Trigger: GCTGTGTTTGGAGACGGCCAAGTGAAGGAGCCAGTG...CCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCTGCTCTGGTTTTATCTaGGAAACCTTGGGATCGAAG +
Preference number: 5 (lower is better)
Translates to: ENTWPTRHLLWGQCLWLACSGFI*ETLGSK
Trigger: CTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGCA...GGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp AGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCGGCCTTTCCTGTCGCTaGCATCATCTTTCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SSLEGGLAGRGNLPTALLGLSCR*HHLSCS
Trigger: AGAGCAGGAAAGATGATGCAAGCGACAGGAAAGGCC...GAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATAAGGCGCACTTGTGTTaGTACCTTCCTGAACTTCTC +
Preference number: 5 (lower is better)
Translates to: ELLGAACECPPEGYRFMHKAHLC*YLPELL
Trigger: GAGAAGTTCAGGAAGGTACAAACACAAGTGCGCCTT...ATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp GAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCTTTTGCAAGGCGCACTaGTGTTTGTACCTTCCTGAA +
Preference number: 5 (lower is better)
Translates to: ENTWPTRHLLWGQCLWLAFCKAH*CLYLPE
Trigger: TTCAGGAAGGTACAAACACAAGTGCGCCTTGCAAAA...GGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGTTTTGCAAGGCGCACTaGTGTTTGTACCTTCCTGAA +
Preference number: 5 (lower is better)
Translates to: EHVAHQAPAVGTVSLVGQFCKAH*CLYLPE
Trigger: TTCAGGAAGGTACAAACACAAGTGCGCCTTGCAAAA...CTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp AGGCTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGCAACAGCATCAGGATTaGAGAGTGGGTCGAGGTCAG +
Preference number: 5 (lower is better)
Translates to: RLNQAVRSEAALAGSCSEQQHQD*RVGRGQ
Trigger: CTGACCTCGACCCACTCTCAAATCCTGATGCTGTTG...CTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp CTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAGGACAGTGTCTTTGGTaGGCCAGAGCTTCATCCAGA +
Preference number: 5 (lower is better)
Translates to: LTGRWLGRKRESSYSPPPGQCLW*ARASSR
Trigger: TCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC...TGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp TGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGGTGGGGACAGTGTCTTaGGTTGGCCAGAGCTTCATC +
Preference number: 5 (lower is better)
Translates to: CGDSVFGWPELHPELTGRVGTVS*VGQSFI
Trigger: GATGAAGCTCTGGCCAACCAAAGACACTGTCCCCAC...CCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAGGTGCTCTGGTTTTATCTaGGAAACCTTGGGATCGAAG +
Preference number: 5 (lower is better)
Translates to: GLAGRGNLPTALLQGGQRCSGFI*ETLGSK
Trigger: CTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGCA...CCTCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGCCTTTCCTGTCGCTaGCATCATCTTTCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: AVGTVSLVGQSFIQSSLEGLSCR*HHLSCS
Trigger: AGAGCAGGAAAGATGATGCAAGCGACAGGAAAGGCC...TTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAAAAGTCTCCACTTCTaGGTGAAATCGACACAAAGG +
Preference number: 5 (lower is better)
Translates to: EHVAHQAPAVGTVSLVGQKSLHF*VKSTQR
Trigger: CCTTTGTGTCGATTTCACCAAGAAGTGGAGACTTTT...CTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAAAAGTCTCCACTTCTaGGTGAAATCGACACAAAGG +
Preference number: 5 (lower is better)
Translates to: ENTWPTRHLLWGQCLWLAKSLHF*VKSTQR
Trigger: CCTTTGTGTCGATTTCACCAAGAAGTGGAGACTTTT...GGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGATTTTGCAAGGCGCACTaGTGTTTGTACCTTCCTGAA +
Preference number: 5 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARFCKAH*CLYLPE
Trigger: TTCAGGAAGGTACAAACACAAGTGCGCCTTGCAAAA...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTAGCAGCAGGTCATCTTaGTCAGCACCTTCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: GQCLWLARASSRAHWKVASSRSS*SAPSGS
Trigger: GGAACCTGAAGGTGCTGACAAAGATGACCTGCTGCT...AGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp CTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAGCTTCTGATTTCAACTaGGATCTCACGGTAGCCCAG +
Preference number: 5 (lower is better)
Translates to: LTGRWLGRKRESSYSPPPASDFN*DLTVAQ
Trigger: CTGGGCTACCGTGAGATCCAAGTTGAAATCAGAAGC...TGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp AGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCGCTTCTGATTTCAACTaGGATCTCACGGTAGCCCAG +
Preference number: 5 (lower is better)
Translates to: SSLEGGLAGRGNLPTALLASDFN*DLTVAQ
Trigger: CTGGGCTACCGTGAGATCCAAGTTGAAATCAGAAGC...GAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTGGACAGTGTCTTTGGTaGGCCAGAGCTTCATCCAGA +
Preference number: 5 (lower is better)
Translates to: GQCLWLARASSRAHWKVAGQCLW*ARASSR
Trigger: TCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC...AGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp TGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGAGTTATATTATAACCTaGCTTGGGGAGGGTCGGGGA +
Preference number: 5 (lower is better)
Translates to: CWGRHVSALPKGTDSCIESYIIT*LGEGRG
Trigger: TCCCCGACCCTCCCCAAGCAAGGTTATAATATAACT...CTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339809.10
CDS-3UTR CAA 90 bp GGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGCTTCTTCTTCTATTGTaGATGATTTGGGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: GRWLGRKRESSYSPPPRGLLLLL*MIWGEG
Trigger: CCCTTCTCCCCAAATCATCAACAATAGAAGAAGAAG...CCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAGGGACAGGTTCTCTGAATaGAATGAAACAGCTCTAGCT +
Preference number: 5 (lower is better)
Translates to: GLAGRGNLPTALLQGGQRDRFSE*NETALA
Trigger: AGCTAGAGCTGTTTCATTCAATTCAGAGAACCTGTC...CCTCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp CAGAAGCCCAGCTCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTTTGATAGAGTACAATaGCTTTCGATAAGTCCAGAC +
Preference number: 5 (lower is better)
Translates to: QKPSSSTSVRTRGPPGTCFDRVQ*LSISPD
Trigger: GTCTGGACTTATCGAAAGCAATTGTACTCTATCAAA...GCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGAGCTGGGCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp CACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTTATCTTGGAAACCTaGGGATCGAAGAAATTTTCC +
Preference number: 5 (lower is better)
Translates to: HVAHQAPAVGTVSLVGQSFILET*GSKKFS
Trigger: GGAAAATTTCTTCGATCCCAAGGTTTCCAAGATAAA...GCTCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp TGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGTGCTCTGGTTTTATCTaGGAAACCTTGGGATCGAAG +
Preference number: 5 (lower is better)
Translates to: CWGRHVSALPKGTDSCIECSGFI*ETLGSK
Trigger: CTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGCA...CTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp AGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGCTCTGGTTTTATCTaGGAAACCTTGGGATCGAAG +
Preference number: 5 (lower is better)
Translates to: SVRTRGPPGTCCGDSVFGCSGFI*ETLGSK
Trigger: CTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGCA...ACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GAGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTAAGGCGCACTTGTGTTaGTACCTTCCTGAACTTCTC +
Preference number: 5 (lower is better)
Translates to: ELTGRWLGRKRESSYSPPKAHLC*YLPELL
Trigger: GAGAAGTTCAGGAAGGTACAAACACAAGTGCGCCTT...AGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp CTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGGCCTTTTGCAAGGCGCACTaGTGTTTGTACCTTCCTGAA +
Preference number: 5 (lower is better)
Translates to: LNQAVRSEAALAGSCSEAFCKAH*CLYLPE
Trigger: TTCAGGAAGGTACAAACACAAGTGCGCCTTGCAAAA...GGCCTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp TGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGTTTTGCAAGGCGCACTaGTGTTTGTACCTTCCTGAA +
Preference number: 5 (lower is better)
Translates to: CWGRHVSALPKGTDSCIEFCKAH*CLYLPE
Trigger: TTCAGGAAGGTACAAACACAAGTGCGCCTTGCAAAA...CTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp GTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAAAACTAGAGGATTCCTaGCGCTGGTTTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: VAWQEEGIFLQPSSKGDRKLEDS*RWFSSS
Trigger: AGAGGAAGAAAACCAGCGCAAGGAATCCTCTAGTTT...TCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp TTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTACAGCGGCCCACTCTTaGCTGAACTCGCCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: FQPRRGQKETVVSANMAATAAHS*LNSPSS
Trigger: GGAAGAGGGCGAGTTCAGCAAAGAGTGGGCCGCTGT...AGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GATGGCCCGATGCCGAAAAGTCTCCACTTCTTGGTGAAATCGACACAAAGGATTACAGCGGCCCACTCTTaGCTGAACTCGCCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: DGPMPKSLHFLVKSTQRITAAHS*LNSPSS
Trigger: GGAAGAGGGCGAGTTCAGCAAAGAGTGGGCCGCTGT...AATCCTTTGTGTCGATTTCACCAAGAAGTGGAGACTTTTCGGCATCGGGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS-3UTR CAA 90 bp CAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTCACAGCGGCCCACTCTTaGCTGAACTCGCCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: QIWLLSIVRFVPWTEAQLTAAHS*LNSPSS
Trigger: GGAAGAGGGCGAGTTCAGCAAAGAGTGGGCCGCTGT...GAGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp CACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCGTACAGATTCATGCATaGAGCAATTCGTGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: HVAHQAPAVGTVSLVGQSVQIHA*SNSCSL
Trigger: TAAAGAACACGAATTGCTCAATGCATGAATCTGTAC...GCTCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GCCATGATGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAACCGCTTCTAGACAAAGTTATATTATAACCTaGCTTGGGGAGGGTCGGGGA +
Preference number: 5 (lower is better)
Translates to: AMMGCRQESGGLETASRQSYIIT*LGEGRG
Trigger: TCCCCGACCCTCCCCAAGCAAGGTTATAATATAACT...TTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406470.6
CDS-3UTR CAA 90 bp TGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGCAAAGGCAAGCTGGTATGTaGCTAGCATGTGAGACAAGA +
Preference number: 5 (lower is better)
Translates to: WGRHVSALPKGTDSCIEQRQAGM*LACETR
Trigger: TCTTGTCTCACATGCTAGCAACATACCAGCTTGCCT...TTGCTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339809.10
CDS-3UTR CAA 90 bp AGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTGACAGGTTCTCTGAATaGAATGAAACAGCTCTAGCT +
Preference number: 5 (lower is better)
Translates to: SVRTRGPPGTCCGDSVFGDRFSE*NETALA
Trigger: AGCTAGAGCTGTTTCATTCAATTCAGAGAACCTGTC...ACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp TGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGGACAGGTTCTCTGAATaGAATGAAACAGCTCTAGCT +
Preference number: 5 (lower is better)
Translates to: CWGRHVSALPKGTDSCIEDRFSE*NETALA
Trigger: AGCTAGAGCTGTTTCATTCAATTCAGAGAACCTGTC...CTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp TGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGCAATGCTCTGGTTTTATCTaGGAAACCTTGGGATCGAAG +
Preference number: 5 (lower is better)
Translates to: WGRHVSALPKGTDSCIEQCSGFI*ETLGSK
Trigger: CTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGCA...TTGCTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp TGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGAAAAGTCTCCACTTCTaGGTGAAATCGACACAAAGG +
Preference number: 5 (lower is better)
Translates to: CWGRHVSALPKGTDSCIEKSLHF*VKSTQR
Trigger: CCTTTGTGTCGATTTCACCAAGAAGTGGAGACTTTT...CTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp TCCTCCACCAGTGTGAGAACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTACAGATTCATGCATaGAGCAATTCGTGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: SSTSVRTRGPPGTCCGDSVQIHA*SNSCSL
Trigger: TAAAGAACACGAATTGCTCAATGCATGAATCTGTAC...ACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTTCTCACACTGGTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp AGGCTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGCTTCTTCTTCTATTGTaGATGATTTGGGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: RLNQAVRSEAALAGSCSELLLLL*MIWGEG
Trigger: CCCTTCTCCCCAAATCATCAACAATAGAAGAAGAAG...CTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp CTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAGACAGGTTCTCTGAATaGAATGAAACAGCTCTAGCT +
Preference number: 5 (lower is better)
Translates to: LTGRWLGRKRESSYSPPPDRFSE*NETALA
Trigger: AGCTAGAGCTGTTTCATTCAATTCAGAGAACCTGTC...TGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp AACACGTGGCCCACCAGGCACCTGCTGTGGGGACAGTGTCTTTGGTTGGCCAGATTTGATAGAGTACAATaGCTTTCGATAAGTCCAGAC +
Preference number: 5 (lower is better)
Translates to: NTWPTRHLLWGQCLWLARFDRVQ*LSISPD
Trigger: GTCTGGACTTATCGAAAGCAATTGTACTCTATCAAA...TCTGGCCAACCAAAGACACTGTCCCCACAGCAGGTGCCTGGTGGGCCACGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAGGTTTGATAGAGTACAATaGCTTTCGATAAGTCCAGAC +
Preference number: 5 (lower is better)
Translates to: GLAGRGNLPTALLQGGQRFDRVQ*LSISPD
Trigger: GTCTGGACTTATCGAAAGCAATTGTACTCTATCAAA...CCTCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp AGGCTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGAAAAGTCTCCACTTCTaGGTGAAATCGACACAAAGG +
Preference number: 5 (lower is better)
Translates to: RLNQAVRSEAALAGSCSEKSLHF*VKSTQR
Trigger: CCTTTGTGTCGATTTCACCAAGAAGTGGAGACTTTT...CTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp TGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGAAACTAGAGGATTCCTaGCGCTGGTTTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: CGDSVFGWPELHPELTGRKLEDS*RWFSSS
Trigger: AGAGGAAGAAAACCAGCGCAAGGAATCCTCTAGTTT...CCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp TATCGGTTTTCCCAACAGCATCAGGATTTGAGAGTGGGTCGAGGTCAGCGAAGAAGCAGCAGGTCATCTTaGTCAGCACCTTCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: YRFSQQHQDLRVGRGQRRSSRSS*SAPSGS
Trigger: GGAACCTGAAGGTGCTGACAAAGATGACCTGCTGCT...TCTTCGCTGACCTCGACCCACTCTCAAATCCTGATGCTGTTGGGAAAACCGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp TACATGCTTTTGAATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGACAGCGGCCCACTCTTaGCTGAACTCGCCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: YMLLNSSHEEDKRRQWYLTAAHS*LNSPSS
Trigger: GGAAGAGGGCGAGTTCAGCAAAGAGTGGGCCGCTGT...CAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAATTCAAAAGCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GAGCTGCTGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATGTACAGATTCATGCATaGAGCAATTCGTGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: ELLGAACECPPEGYRFMHVQIHA*SNSCSL
Trigger: TAAAGAACACGAATTGCTCAATGCATGAATCTGTAC...ATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCAGCAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp GGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGGTACAGATTCATGCATaGAGCAATTCGTGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: GRWLGRKRESSYSPPPRGVQIHA*SNSCSL
Trigger: TAAAGAACACGAATTGCTCAATGCATGAATCTGTAC...CCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GCTGCCTCTGAGGCTGTAGGACACGTCATTCAAACCTACCATCAAAGTAGGCTTGGACAGTGTCTTTGGTaGGCCAGAGCTTCATCCAGA +
Preference number: 5 (lower is better)
Translates to: AASEAVGHVIQTYHQSRLGQCLW*ARASSR
Trigger: TCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC...AAGCCTACTTTGATGGTAGGTTTGAATGACGTGTCCTACAGCCTCAGAGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR CAA 90 bp TTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTGTGGGGACAGTGTCTTaGGTTGGCCAGAGCTTCATC +
Preference number: 5 (lower is better)
Translates to: FQPRRGQKETVVSANMAAVGTVS*VGQSFI
Trigger: GATGAAGCTCTGGCCAACCAAAGACACTGTCCCCAC...AGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp CTGAACCAGGCAGTCAGGTCTGAGGCAGCCTTAGCAGGTTCTTGTAGCGAGGCCTTTGATAGAGTACAATaGCTTTCGATAAGTCCAGAC +
Preference number: 5 (lower is better)
Translates to: LNQAVRSEAALAGSCSEAFDRVQ*LSISPD
Trigger: GTCTGGACTTATCGAAAGCAATTGTACTCTATCAAA...GGCCTCGCTACAAGAACCTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp CAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTCGGCCTTTCCTGTCGCTaGCATCATCTTTCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: QIWLLSIVRFVPWTEAQLGLSCR*HHLSCS
Trigger: AGAGCAGGAAAGATGATGCAAGCGACAGGAAAGGCC...GAGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp TGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGAAAAGTCTCCACTTCTaGGTGAAATCGACACAAAGG +
Preference number: 5 (lower is better)
Translates to: CGDSVFGWPELHPELTGRKSLHF*VKSTQR
Trigger: CCTTTGTGTCGATTTCACCAAGAAGTGGAGACTTTT...CCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GCTGTGGGGACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAAAAAGTCTCCACTTCTaGGTGAAATCGACACAAAGG +
Preference number: 5 (lower is better)
Translates to: AVGTVSLVGQSFIQSSLEKSLHF*VKSTQR
Trigger: CCTTTGTGTCGATTTCACCAAGAAGTGGAGACTTTT...TTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCCCCACAGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp TTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTCAACAGCATCAGGATTaGAGAGTGGGTCGAGGTCAG +
Preference number: 5 (lower is better)
Translates to: FQPRRGQKETVVSANMAAQQHQD*RVGRGQ
Trigger: CTGACCTCGACCCACTCTCAAATCCTGATGCTGTTG...AGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCCAAGGGGGACAGAGTACAGATTCATGCATaGAGCAATTCGTGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: VAWQEEGIFLQPSSKGDRVQIHA*SNSCSL
Trigger: TAAAGAACACGAATTGCTCAATGCATGAATCTGTAC...TCTGTCCCCCTTGGAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GCTGCCTCTGAGGCTGTAGGACACGTCATTCAAACCTACCATCAAAGTAGGCTTGCTTCTGATTTCAACTaGGATCTCACGGTAGCCCAG +
Preference number: 5 (lower is better)
Translates to: AASEAVGHVIQTYHQSRLASDFN*DLTVAQ
Trigger: CTGGGCTACCGTGAGATCCAAGTTGAAATCAGAAGC...AAGCCTACTTTGATGGTAGGTTTGAATGACGTGTCCTACAGCCTCAGAGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR CAA 90 bp ATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCGGACAGTGTCTTTGGTaGGCCAGAGCTTCATCCAGA +
Preference number: 5 (lower is better)
Translates to: IPATKRTKGDSGICKYGCGQCLW*ARASSR
Trigger: TCTGGATGAAGCTCTGGCCAACCAAAGACACTGTCC...GCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS GCA 90 bp TCCCATTATGCCCCCAATTACACTCTGTATTTCAGCCAAACTAAATaGCTCCCTGTTTCCCCAAATGCTGCCTCCCAGAACTCATGCTGC +
Preference number: 5 (lower is better)
Translates to: SHYAPNYTLYFSQTK*LPVSPNAASQNSCC
Trigger: GCAGCATGAGTTCTGGGAGGCAGCATTTGGGGAAACAGGGAGGCATTTAGTTTGGCTGAAATACAGAGTGTAATTGGGGGCATAATGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470696.1
CDS-3UTR CAA 90 bp AGCTCACTGGAAGGTGGCTTGGCAGGAAGAGGGAATCTTCCTACAGCCCTCCTCTTTGATAGAGTACAATaGCTTTCGATAAGTCCAGAC +
Preference number: 5 (lower is better)
Translates to: SSLEGGLAGRGNLPTALLFDRVQ*LSISPD
Trigger: GTCTGGACTTATCGAAAGCAATTGTACTCTATCAAA...GAGGAGGGCTGTAGGAAGATTCCCTCTTCCTGCCAAGCCACCTTCCAGTGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GCCATGATGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAACCGCTTCTAGACAATTTGATAGAGTACAATaGCTTTCGATAAGTCCAGAC +
Preference number: 5 (lower is better)
Translates to: AMMGCRQESGGLETASRQFDRVQ*LSISPD
Trigger: GTCTGGACTTATCGAAAGCAATTGTACTCTATCAAA...TTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp TGGGGGCGGCATGTGAGTGCCCTCCCGAAGGGTACAGATTCATGCATTGAGCAATTTATCTTGGAAACCTaGGGATCGAAGAAATTTTCC +
Preference number: 5 (lower is better)
Translates to: WGRHVSALPKGTDSCIEQFILET*GSKKFS
Trigger: GGAAAATTTCTTCGATCCCAAGGTTTCCAAGATAAA...TTGCTCAATGCATGAATCTGTACCCTTCGGGAGGGCACTCACATGCCGCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp GCCATGATGGGATGTAGGCAGGAGAGCGGTGGCCTGGAAACCGCTTCTAGACAATTTATCTTGGAAACCTaGGGATCGAAGAAATTTTCC +
Preference number: 5 (lower is better)
Translates to: AMMGCRQESGGLETASRQFILET*GSKKFS
Trigger: GGAAAATTTCTTCGATCCCAAGGTTTCCAAGATAAA...TTGTCTAGAAGCGGTTTCCAGGCCACCGCTCTCCTGCCTACATCCCATCATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTTAAAAGTCTCCACTTCTaGGTGAAATCGACACAAAGG +
Preference number: 5 (lower is better)
Translates to: DSVFGWPELHPELTGRWLKSLHF*VKSTQR
Trigger: CCTTTGTGTCGATTTCACCAAGAAGTGGAGACTTTT...AAGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp CGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTTTCCATAGTGTGGGGACAGTGTCTTaGGTTGGCCAGAGCTTCATC +
Preference number: 5 (lower is better)
Translates to: RRGQKETVVSANMAAFHSVGTVS*VGQSFI
Trigger: GATGAAGCTCTGGCCAACCAAAGACACTGTCCCCAC...ACTATGGAAAGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GCAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTAAGGCGCACTTGTGTTaGTACCTTCCTGAACTTCTC +
Preference number: 5 (lower is better)
Translates to: ANMAAFHSKVCALDRSPAKAHLC*YLPELL
Trigger: GAGAAGTTCAGGAAGGTACAAACACAAGTGCGCCTT...AGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp CGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTTTCCATAGTAGCAGCAGGTCATCTTaGTCAGCACCTTCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: RRGQKETVVSANMAAFHSSSRSS*SAPSGS
Trigger: GGAACCTGAAGGTGCTGACAAAGATGACCTGCTGCT...ACTATGGAAAGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp TATCGGTTTTCCCAACAGCATCAGGATTTGAGAGTGGGTCGAGGTCAGCGAAGACTTCTTCTTCTATTGTaGATGATTTGGGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: YRFSQQHQDLRVGRGQRRLLLLL*MIWGEG
Trigger: CCCTTCTCCCCAAATCATCAACAATAGAAGAAGAAG...TCTTCGCTGACCTCGACCCACTCTCAAATCCTGATGCTGTTGGGAAAACCGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp TATCGGTTTTCCCAACAGCATCAGGATTTGAGAGTGGGTCGAGGTCAGCGAAGAGACAGGTTCTCTGAATaGAATGAAACAGCTCTAGCT +
Preference number: 5 (lower is better)
Translates to: YRFSQQHQDLRVGRGQRRDRFSE*NETALA
Trigger: AGCTAGAGCTGTTTCATTCAATTCAGAGAACCTGTC...TCTTCGCTGACCTCGACCCACTCTCAAATCCTGATGCTGTTGGGAAAACCGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp GACAGTGTCTTTGGTTGGCCAGAGCTTCATCCAGAGCTCACTGGAAGGTGGCTTTTTATCTTGGAAACCTaGGGATCGAAGAAATTTTCC +
Preference number: 5 (lower is better)
Translates to: DSVFGWPELHPELTGRWLFILET*GSKKFS
Trigger: GGAAAATTTCTTCGATCCCAAGGTTTCCAAGATAAA...AAGCCACCTTCCAGTGAGCTCTGGATGAAGCTCTGGCCAACCAAAGACACTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp TTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTTGCTCTGGTTTTATCTaGGAAACCTTGGGATCGAAG +
Preference number: 5 (lower is better)
Translates to: FQPRRGQKETVVSANMAACSGFI*ETLGSK
Trigger: CTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGCA...AGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp ATTCCAGCCACGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCAAACTAGAGGATTCCTaGCGCTGGTTTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: IPATKRTKGDSGICKYGCKLEDS*RWFSSS
Trigger: AGAGGAAGAAAACCAGCGCAAGGAATCCTCTAGTTT...GCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCGTGGCTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GCAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTAAACTAGAGGATTCCTaGCGCTGGTTTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: ANMAAFHSKVCALDRSPAKLEDS*RWFSSS
Trigger: AGAGGAAGAAAACCAGCGCAAGGAATCCTCTAGTTT...AGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp CAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTCCTTCTTCTTCTATTGTaGATGATTTGGGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: QIWLLSIVRFVPWTEAQLLLLLL*MIWGEG
Trigger: CCCTTCTCCCCAAATCATCAACAATAGAAGAAGAAG...GAGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp CAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTCGACAGGTTCTCTGAATaGAATGAAACAGCTCTAGCT +
Preference number: 5 (lower is better)
Translates to: QIWLLSIVRFVPWTEAQLDRFSE*NETALA
Trigger: AGCTAGAGCTGTTTCATTCAATTCAGAGAACCTGTC...GAGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp CGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTTTCCATAGTAAGGCGCACTTGTGTTaGTACCTTCCTGAACTTCTC +
Preference number: 5 (lower is better)
Translates to: RRGQKETVVSANMAAFHSKAHLC*YLPELL
Trigger: GAGAAGTTCAGGAAGGTACAAACACAAGTGCGCCTT...ACTATGGAAAGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp CGCTTGCATCATCTTTCCTGCTCTGGTTTTATCTTGGAAACCTTGGGATCGAAGAAACTAGAGGATTCCTaGCGCTGGTTTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: RLHHLSCSGFILETLGSKKLEDS*RWFSSS
Trigger: AGAGGAAGAAAACCAGCGCAAGGAATCCTCTAGTTT...CTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGCAGGAAAGATGATGCAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS-3UTR CAA 90 bp GAAAGAAGTGTGAGCTCCATCAGGGTCAAGGTTAGATTTTCTGAGAAGGGATGGCAGTTCGTTTTCTTCTaGAGACAAGATCAGAGGGCA +
Preference number: 5 (lower is better)
Translates to: ERSVSSIRVKVRFSEKGWQFVFF*RQDQRA
Trigger: TGCCCTCTGATCTTGTCTCAAGAAGAAAACGAACTG...CCATCCCTTCTCAGAAAATCTAACCTTGACCCTGATGGAGCTCACACTTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457755.5
CDS-3UTR CAA 90 bp GTGGAAAGAAGTGTGAGCTCCATCAGGGTCAAGGTTAGATTTTCTGAGAAGGGAGACAGGTTCTCTGAATaGAATGAAACAGCTCTAGCT +
Preference number: 5 (lower is better)
Translates to: VERSVSSIRVKVRFSEKGDRFSE*NETALA
Trigger: AGCTAGAGCTGTTTCATTCAATTCAGAGAACCTGTC...TCCCTTCTCAGAAAATCTAACCTTGACCCTGATGGAGCTCACACTTCTTTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457755.5
CDS-3UTR CAA 90 bp CGAAGAGGACAAAAGGAGACAGTGGTATCTGCAAATATGGCTGCTTTCCATAGTTGCTCTGGTTTTATCTaGGAAACCTTGGGATCGAAG +
Preference number: 5 (lower is better)
Translates to: RRGQKETVVSANMAAFHSCSGFI*ETLGSK
Trigger: CTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGCA...ACTATGGAAAGCAGCCATATTTGCAGATACCACTGTCTCCTTTTGTCCTCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp GGAGCAGGACCAATCATTAGACTCAAGTTCACCACAATTCATCTCCCAGGAACAAAAAGTCTCCACTTCTaGGTGAAATCGACACAAAGG +
Preference number: 5 (lower is better)
Translates to: GAGPIIRLKFTTIHLPGTKSLHF*VKSTQR
Trigger: CCTTTGTGTCGATTTCACCAAGAAGTGGAGACTTTT...TGTTCCTGGGAGATGAATTGTGGTGAACTTGAGTCTAATGATTGGTCCTGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR CAA 90 bp AAGTCTTTCATATTTTGGTCTAAAAGCTGCGAAGGAAGGAAACCTGAGCCTGTCAAGGCGCACTTGTGTTaGTACCTTCCTGAACTTCTC +
Preference number: 5 (lower is better)
Translates to: KSFIFWSKSCEGRKPEPVKAHLC*YLPELL
Trigger: GAGAAGTTCAGGAAGGTACAAACACAAGTGCGCCTT...GACAGGCTCAGGTTTCCTTCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp GCTGCCTCTGAGGCTGTAGGACACGTCATTCAAACCTACCATCAAAGTAGGCTTGTACAGATTCATGCATaGAGCAATTCGTGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: AASEAVGHVIQTYHQSRLVQIHA*SNSCSL
Trigger: TAAAGAACACGAATTGCTCAATGCATGAATCTGTAC...AAGCCTACTTTGATGGTAGGTTTGAATGACGTGTCCTACAGCCTCAGAGGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
CDS-3UTR CAA 90 bp CAAATATGGCTGCTTTCCATAGTAAGGTTTGTGCCTTGGACAGAAGCCCAGCTCTTTATCTTGGAAACCTaGGGATCGAAGAAATTTTCC +
Preference number: 5 (lower is better)
Translates to: QIWLLSIVRFVPWTEAQLFILET*GSKKFS
Trigger: GGAAAATTTCTTCGATCCCAAGGTTTCCAAGATAAA...GAGCTGGGCTTCTGTCCAAGGCACAAACCTTACTATGGAAAGCAGCCATATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265577.11
ENST00000396675.7
ENST00000402384.8
ENST00000406470.6
ENST00000650486.1
CDS-3UTR CAA 90 bp CTGAGTTTATGGGACTTGTACAATCTCCCCTTTAGCAATGTCAAACAAGTATTTGGCCTTTCCTGTCGCTaGCATCATCTTTCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LSLWDLYNLPFSNVKQVFGLSCR*HHLSCS
Trigger: AGAGCAGGAAAGATGATGCAAGCGACAGGAAAGGCC...AAATACTTGTTTGACATTGCTAAAGGGGAGATTGTACAAGTCCCATAAACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR CAA 90 bp ATATTTTGGTCTAAAAGCTGCGAAGGAAGGAAACCTGAGCCTGTCTGGGCCTTGGTACAGATTCATGCATaGAGCAATTCGTGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: IFWSKSCEGRKPEPVWALVQIHA*SNSCSL
Trigger: TAAAGAACACGAATTGCTCAATGCATGAATCTGTAC...CAAGGCCCAGACAGGCTCAGGTTTCCTTCCTTCGCAGCTTTTAGACCAAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp GTGGAAAGAAGTGTGAGCTCCATCAGGGTCAAGGTTAGATTTTCTGAGAAGGGATTTGATAGAGTACAATaGCTTTCGATAAGTCCAGAC +
Preference number: 5 (lower is better)
Translates to: VERSVSSIRVKVRFSEKGFDRVQ*LSISPD
Trigger: GTCTGGACTTATCGAAAGCAATTGTACTCTATCAAA...TCCCTTCTCAGAAAATCTAACCTTGACCCTGATGGAGCTCACACTTCTTTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457755.5
CDS-3UTR CAA 90 bp CGCTTGCATCATCTTTCCTGCTCTGGTTTTATCTTGGAAACCTTGGGATCGAAGTTTATCTTGGAAACCTaGGGATCGAAGAAATTTTCC +
Preference number: 5 (lower is better)
Translates to: RLHHLSCSGFILETLGSKFILET*GSKKFS
Trigger: GGAAAATTTCTTCGATCCCAAGGTTTCCAAGATAAA...CTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGCAGGAAAGATGATGCAAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS-3UTR CAA 90 bp ATCATTAGACTCAAGTTCACCACAATTCATCTCCCAGGAACATGTATCTCAAGGCTGAGTTTATGGGACTaGTACAATCTCCCCTTTAGC +
Preference number: 5 (lower is better)
Translates to: IIRLKFTTIHLPGTCISRLSLWD*YNLPFS
Trigger: GCTAAAGGGGAGATTGTACAAGTCCCATAAACTCAG...CCTTGAGATACATGTTCCTGGGAGATGAATTGTGGTGAACTTGAGTCTAATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR CAA 90 bp ATCATTAGACTCAAGTTCACCACAATTCATCTCCCAGGAACATGTATCTCAAGGCTTCTTCTTCTATTGTaGATGATTTGGGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: IIRLKFTTIHLPGTCISRLLLLL*MIWGEG
Trigger: CCCTTCTCCCCAAATCATCAACAATAGAAGAAGAAG...CCTTGAGATACATGTTCCTGGGAGATGAATTGTGGTGAACTTGAGTCTAATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR CAA 90 bp CTGAGTTTATGGGACTTGTACAATCTCCCCTTTAGCAATGTCAAACAAGTATTTAAGGCGCACTTGTGTTaGTACCTTCCTGAACTTCTC +
Preference number: 5 (lower is better)
Translates to: LSLWDLYNLPFSNVKQVFKAHLC*YLPELL
Trigger: GAGAAGTTCAGGAAGGTACAAACACAAGTGCGCCTT...AAATACTTGTTTGACATTGCTAAAGGGGAGATTGTACAAGTCCCATAAACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS GCA 90 bp ACAACATGTTCATCTTCCTTCTTCCCTGTGGCTTTAATAAAGGCCTaGTTCGTCTCCCAATATTTCTGTTGCATCTTATTTACAACTGAC +
Preference number: 5 (lower is better)
Translates to: TTCSSSFFPVALIKA*FVSQYFCCILFTTD
Trigger: GTCAGTTGTAAATAAGATGCAACAGAAATATTGGGAGACGAAGCAGGCCTTTATTAAAGCCACAGGGAAGAAGGAAGATGAACATGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000265577.11
ENST00000317367.9
ENST00000339809.10
ENST00000396675.7
ENST00000401396.5
ENST00000402384.8
ENST00000406470.6
ENST00000407906.5
ENST00000422063.6
ENST00000430867.5
ENST00000446305.1
ENST00000447326.5
ENST00000455539.5
ENST00000457755.5
ENST00000650486.1
CDS-3UTR CAA 90 bp AAGTCTTTCATATTTTGGTCTAAAAGCTGCGAAGGAAGGAAACCTGAGCCTGTCTTTGATAGAGTACAATaGCTTTCGATAAGTCCAGAC +
Preference number: 5 (lower is better)
Translates to: KSFIFWSKSCEGRKPEPVFDRVQ*LSISPD
Trigger: GTCTGGACTTATCGAAAGCAATTGTACTCTATCAAA...GACAGGCTCAGGTTTCCTTCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339809.10
ENST00000455539.5
CDS-3UTR CAA 90 bp CTGAGTTTATGGGACTTGTACAATCTCCCCTTTAGCAATGTCAAACAAGTATTTTGCTCTGGTTTTATCTaGGAAACCTTGGGATCGAAG +
Preference number: 5 (lower is better)
Translates to: LSLWDLYNLPFSNVKQVFCSGFI*ETLGSK
Trigger: CTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGCA...AAATACTTGTTTGACATTGCTAAAGGGGAGATTGTACAAGTCCCATAAACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR CAA 90 bp GTAAGAGAGGAAAGGAGGACACCTTCTCAAGTGAGGATATTTGAATATAATAATAGTTATATTATAACCTaGCTTGGGGAGGGTCGGGGA +
Preference number: 5 (lower is better)
Translates to: VREERRTPSQVRIFEYNNSYIIT*LGEGRG
Trigger: TCCCCGACCCTCCCCAAGCAAGGTTATAATATAACT...ATTATTATATTCAAATATCCTCACTTGAGAAGGTGTCCTCCTTTCCTCTCTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR CAA 90 bp GTAAGAGAGGAAAGGAGGACACCTTCTCAAGTGAGGATATTTGAATATAATAATTTTTGCAAGGCGCACTaGTGTTTGTACCTTCCTGAA +
Preference number: 5 (lower is better)
Translates to: VREERRTPSQVRIFEYNNFCKAH*CLYLPE
Trigger: TTCAGGAAGGTACAAACACAAGTGCGCCTTGCAAAA...ATTATTATATTCAAATATCCTCACTTGAGAAGGTGTCCTCCTTTCCTCTCTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR CAA 90 bp GTAAGAGAGGAAAGGAGGACACCTTCTCAAGTGAGGATATTTGAATATAATAATGACAGGTTCTCTGAATaGAATGAAACAGCTCTAGCT +
Preference number: 5 (lower is better)
Translates to: VREERRTPSQVRIFEYNNDRFSE*NETALA
Trigger: AGCTAGAGCTGTTTCATTCAATTCAGAGAACCTGTC...ATTATTATATTCAAATATCCTCACTTGAGAAGGTGTCCTCCTTTCCTCTCTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR CAA 90 bp GTAAGAGAGGAAAGGAGGACACCTTCTCAAGTGAGGATATTTGAATATAATAATGTTCAATTCGCGCTTTaGGATTGCAGTAGATTCTCA +
Preference number: 5 (lower is better)
Translates to: VREERRTPSQVRIFEYNNVQFAL*DCSRFS
Trigger: TGAGAATCTACTGCAATCCAAAAGCGCGAATTGAAC...ATTATTATATTCAAATATCCTCACTTGAGAAGGTGTCCTCCTTTCCTCTCTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS TCA 90 bp GAACTTCACAATGGCCAAAGCTTACTTTTAGCTCAAACACCATTTTaGTGTTATTTAAACCTTGTGCCATCCTTGGTTCATTGCAACAAA +
Preference number: 5 (lower is better)
Translates to: ELHNGQSLLLAQTPF*CYLNLVPSLVHCNK
Trigger: TTTGTTGCAATGAACCAAGGATGGCACAAGGTTTAAATAACATCAAAATGGTGTTTGAGCTAAAAGTAAGCTTTGGCCATTGTGAAGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490041.1
CDS-3UTR CAA 90 bp CTGAGTTTATGGGACTTGTACAATCTCCCCTTTAGCAATGTCAAACAAGTATTTTTTGATAGAGTACAATaGCTTTCGATAAGTCCAGAC +
Preference number: 5 (lower is better)
Translates to: LSLWDLYNLPFSNVKQVFFDRVQ*LSISPD
Trigger: GTCTGGACTTATCGAAAGCAATTGTACTCTATCAAA...AAATACTTGTTTGACATTGCTAAAGGGGAGATTGTACAAGTCCCATAAACTCAG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS-3UTR CAA 90 bp CTGAGTTTATGGGACTTGTACAATCTCCCCTTTAGCAATGTCAAACAAGTATTTTTTATCTTGGAAACCTaGGGATCGAAGAAATTTTCC +
Preference number: 5 (lower is better)
Translates to: LSLWDLYNLPFSNVKQVFFILET*GSKKFS
Trigger: GGAAAATTTCTTCGATCCCAAGGTTTCCAAGATAAA...AAATACTTGTTTGACATTGCTAAAGGGGAGATTGTACAAGTCCCATAAACTCAG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000407906.5
CDS GCA 72 bp TGCTCTCCGGCAGGTGTTCCACGTGGCCATAGCGTTTaGGTCACAATGACCTGGCGGACAGGTGGGAGCCAC +
Preference number: 6 (lower is better)
Translates to: CSPAGVPRGHSV*VTMTWRTGGSH
Trigger: GTGGCTCCCACCTGTCCGCCAGGTCATTGTGACGCAAACGCTATGGCCACGTGGAACACCTGCCGGAGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446305.1
CDS TCA 72 bp CAGGTGTTCCACGTGGCCATAGCGTTTGCGTCACAATaGCCTGGCGGACAGGTGGGAGCCACAGCGTACACC +
Preference number: 6 (lower is better)
Translates to: QVFHVAIAFASQ*PGGQVGATAYT
Trigger: GGTGTACGCTGTGGCTCCCACCTGTCCGCCAGGTCATTGTGACGCAAACGCTATGGCCACGTGGAACACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446305.1
CDS TCA 72 bp GGGCCAATCCCGTGTTCATGGAGGATGGCCAAGGCATaGCCACTGCCCATTTCTACATTTGGCCCTTTGAGG +
Preference number: 6 (lower is better)
Translates to: GPIPCSWRMAKA*PLPISTFGPLR
Trigger: CCTCAAAGGGCCAAATGTAGAAATGGGCAGTGGTCATGCCTTGGCCATCCTCCATGAACACGGGATTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476942.1
CDS GCA 72 bp CCTGTTTCCCCAAATGCTGCCTCCCAGAACTCATGCTaGTCCCACCACCTGGGACATTCTCCTCTCCATTCT +
Preference number: 6 (lower is better)
Translates to: PVSPNAASQNSC*SHHLGHSPLHS
Trigger: AGAATGGAGAGGAGAATGTCCCAGGTGGTGGGAGCAGCATGAGTTCTGGGAGGCAGCATTTGGGGAAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470696.1
CDS CAA 90 bp CCTTGGCCTCCTAAAATGAACATATCCTCTTTTGATAGAGTACAATaGCTTTCGATAAGTCCAGACAGGTTCTCTGAATTGAATGAAACA +
Preference number: 6 (lower is better)
Translates to: PWPPKMNISSFDRVQ*LSISPDRFSELNET
Trigger: TGTTTCATTCAATTCAGAGAACCTGTCTGGACTTATCGAAAGCAATTGTACTCTATCAAAAGAGGATATGTTCATTTTAGGAGGCCAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS TCA 72 bp TTGCTGAATAATAATCGAAATGCATGTAGTTCCAACTaGTTAGTCAGCCAGAGAAGATTATCCATGTACCCA +
Preference number: 6 (lower is better)
Translates to: LLNNNRNACSSN*LVSQRRLSMYP
Trigger: TGGGTACATGGATAATCTTCTCTGGCTGACTAATCAGTTGGAACTACATGCATTTCGATTATTATTCAGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476942.1
CDS CAA 72 bp GAGACAAGAAACATATCCTCTTTTGATAGAGTACAATaGCTTTCGATAAGTCCAGACAGGTTCTCTGAATTG +
Preference number: 6 (lower is better)
Translates to: ETRNISSFDRVQ*LSISPDRFSEL
Trigger: CAATTCAGAGAACCTGTCTGGACTTATCGAAAGCAATTGTACTCTATCAAAAGAGGATATGTTTCTTGTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000265577.11
ENST00000317367.9
ENST00000339809.10
ENST00000396675.7
ENST00000401396.5
ENST00000402384.8
ENST00000406470.6
ENST00000407906.5
ENST00000422063.6
ENST00000430867.5
ENST00000447326.5
ENST00000650486.1
CDS CAA 90 bp AGAACTTCACAATGGCCAAAGCTTACTTTTAGCTCAAACACCATTTaGATGTTATTTAAACCTTGTGCCATCCTTGGTTCATTGCAACAA +
Preference number: 6 (lower is better)
Translates to: RTSQWPKLTFSSNTI*MLFKPCAILGSLQQ
Trigger: TTGTTGCAATGAACCAAGGATGGCACAAGGTTTAAATAACATCAAAATGGTGTTTGAGCTAAAAGTAAGCTTTGGCCATTGTGAAGTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490041.1
CDS CAA 72 bp CCTAAAATGAACATATCCTCTTTTGATAGAGTACAATaGCTTTCGATAAGTCCAGACAGGTTCTCTGAATTG +
Preference number: 6 (lower is better)
Translates to: PKMNISSFDRVQ*LSISPDRFSEL
Trigger: CAATTCAGAGAACCTGTCTGGACTTATCGAAAGCAATTGTACTCTATCAAAAGAGGATATGTTCATTTTAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455539.5
CDS CAA 72 bp ATGGTCATTAACATATCCTCTTTTGATAGAGTACAATaGCTTTCGATAAGTCCAGACAGGTTCTCTGAATTG +
Preference number: 6 (lower is better)
Translates to: MVINISSFDRVQ*LSISPDRFSEL
Trigger: CAATTCAGAGAACCTGTCTGGACTTATCGAAAGCAATTGTACTCTATCAAAAGAGGATATGTTAATGACCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457755.5