RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IBA57 (Homo sapiens)

Ensembl gene IDs: ENSG00000181873

Ensembl transcript IDs: ENST00000366711.4, ENST00000484749.5, ENST00000546123.2

Found 418 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACCCGGCGCCATCTGGAGCCCAGCACTCACACGGTGGGCTCCTCTaGGGCCACAGGAAGTCCAGGGAGAAAACAACCCACGTGCCTGGG +
Preference number: 1 (lower is better)
Translates to: DPAPSGAQHSHGGLL*GHRKSREKTTHVPG
Trigger: CCCAGGCACGTGGGTTGTTTTCTCCCTGGACTTCCTGTGGCCCCAGAGGAGCCCACCGTGTGAGTGCTGGGCTCCAGATGGCGCCGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 90 bp CCCAGACAACCCTGTGTGGAGCCACGATTGGGACCCGGCGCCATCTaGAGCCCAGCACTCACACGGTGGGCTCCTCTGGGGCCACAGGAA +
Preference number: 1 (lower is better)
Translates to: PRQPCVEPRLGPGAI*SPALTRWAPLGPQE
Trigger: TTCCTGTGGCCCCAGAGGAGCCCACCGTGTGAGTGCTGGGCTCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACAGGGTTGTCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 90 bp AGACACCGTCCCGTCCTCCCAGACAACCCTGTGTGGAGCCACGATTaGGACCCGGCGCCATCTGGAGCCCAGCACTCACACGGTGGGCTC +
Preference number: 1 (lower is better)
Translates to: RHRPVLPDNPVWSHD*DPAPSGAQHSHGGL
Trigger: GAGCCCACCGTGTGAGTGCTGGGCTCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACAGGGTTGTCTGGGAGGACGGGACGGTGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 90 bp GGCTCATGCCAGGCAGAGTGGGGTACAAGGCCCGGAAGCTGCCAGTaGTGGCCAGAGACACCGTCCCGTCCTCCCAGACAACCCTGTGTG +
Preference number: 1 (lower is better)
Translates to: GSCQAEWGTRPGSCQ*WPETPSRPPRQPCV
Trigger: CACACAGGGTTGTCTGGGAGGACGGGACGGTGTCTCTGGCCAGCACTGGCAGCTTCCGGGCCTTGTACCCCACTCTGCCTGGCATGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 90 bp AGTGCTGGCCAGAGACACCGTCCCGTCCTCCCAGACAACCCTGTGTaGAGCCACGATTGGGACCCGGCGCCATCTGGAGCCCAGCACTCA +
Preference number: 1 (lower is better)
Translates to: SAGQRHRPVLPDNPV*SHDWDPAPSGAQHS
Trigger: TGAGTGCTGGGCTCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACAGGGTTGTCTGGGAGGACGGGACGGTGTCTCTGGCCAGCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR TCA 90 bp GGATGCTGGTCTGGAATCCATCCTGCGCTGGGCGCTTCCAGACCATaGCCTGTCCAAGAGGGGCTGAAGGCCACCGGCTCTCAGGACCGC +
Preference number: 1 (lower is better)
Translates to: GCWSGIHPALGASRP*PVQEGLKATGSQDR
Trigger: GCGGTCCTGAGAGCCGGTGGCCTTCAGCCCCTCTTGGACAGGTCATGGTCTGGAAGCGCCCAGCGCAGGATGGATTCCAGACCAGCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 90 bp GGAAGCAAGCACAGTGAAACAACTCCCAAAGCCCGAGCCCCAGCCTaGAGACCCTGGACACCACCCCGCTTCCAGGCACAGGGACCAACC +
Preference number: 1 (lower is better)
Translates to: GSKHSETTPKARAPA*RPWTPPRFQAQGPT
Trigger: GGTTGGTCCCTGTGCCTGGAAGCGGGGTGGTGTCCAGGGTCTGCAGGCTGGGGCTCGGGCTTTGGGAGTTGTTTCACTGTGCTTGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 90 bp ATGGGTGGGGCCAGGCAGGGCACCTACAAGGGGGACTTTCCCAGATaGAAACCAGGGCTCCCACCCAGTAGGCGCAGCAGACAGATGGGA +
Preference number: 1 (lower is better)
Translates to: MGGARQGTYKGDFPR*KPGLPPSRRSRQMG
Trigger: TCCCATCTGTCTGCTGCGCCTACTGGGTGGGAGCCCTGGTTTCCATCTGGGAAAGTCCCCCTTGTAGGTGCCCTGCCTGGCCCCACCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 90 bp TCACTCCAGCTGGCCAGCCGCACATCTGCCCTGCCTTGCCTTTCCTaGGGAAGTGCCAGGAAAGGTCTAGCAGAGGCTCTCCCAGGCTCC +
Preference number: 1 (lower is better)
Translates to: SLQLASRTSALPCLS*GSARKGLAEALPGS
Trigger: GGAGCCTGGGAGAGCCTCTGCTAGACCTTTCCTGGCACTTCCCCAGGAAAGGCAAGGCAGGGCAGATGTGCGGCTGGCCAGCTGGAGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 90 bp GCCATCACTCATATTGGGTGGAGATGCCCAGGCTGGCCAGAGGAGTaGGAGAGCTTCCAGGTGAGACAGGGACGGCTCCAGGTGAGCCCT +
Preference number: 1 (lower is better)
Translates to: AITHIGWRCPGWPEE*ESFQVRQGRLQVSP
Trigger: AGGGCTCACCTGGAGCCGTCCCTGTCTCACCTGGAAGCTCTCCCACTCCTCTGGCCAGCCTGGGCATCTCCACCCAATATGAGTGATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 90 bp AGCCGGGACACTTTGAGCTCGAGGCACAGACCCTCATTCCAGGGGTaGATGCCCCTCATGCAGGAGACACCAGCTCTTGGTGACACAGGC +
Preference number: 1 (lower is better)
Translates to: SRDTLSSRHRPSFQG*MPLMQETPALGDTG
Trigger: GCCTGTGTCACCAAGAGCTGGTGTCTCCTGCATGAGGGGCATGCACCCCTGGAATGAGGGTCTGTGCCTCGAGCTCAAAGTGTCCCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR TCA 90 bp GCAGCCGCTTCCTCCCGTCCATCCGCTCTACACCCTCCTCCTGGGTaGTCACAAACTACACTGCAGCTCAGAGCTGCCTTTAGACCCCTG +
Preference number: 1 (lower is better)
Translates to: AAASSRPSALHPPPG*SQTTLQLRAAFRPL
Trigger: CAGGGGTCTAAAGGCAGCTCTGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGACGGGAGGAAGCGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 90 bp CCTCATAACCAGGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTaGAAGGCGGATGTGGGGGACTCTAACGAGGGGAGGCAGGAGGTG +
Preference number: 1 (lower is better)
Translates to: PHNQELPNRQCGLRK*KADVGDSNEGRQEV
Trigger: CACCTCCTGCCTCCCCTCGTTAGAGTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCCTGGTTATGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 90 bp CAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCTaGCAGCCAGGGACCACTCCTACAGCTTGGAGCCCATGGAAATCA +
Preference number: 1 (lower is better)
Translates to: QPHQSRAHLYLARAL*QPGTTPTAWSPWKS
Trigger: TGATTTCCATGGGCTCCAAGCTGTAGGAGTGGTCCCTGGCTGCCAGAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 90 bp AGGGAATCAGTCGCCATCACTCATATTGGGTGGAGATGCCCAGGCTaGCCAGAGGAGTGGGAGAGCTTCCAGGTGAGACAGGGACGGCTC +
Preference number: 1 (lower is better)
Translates to: RESVAITHIGWRCPG*PEEWESFQVRQGRL
Trigger: GAGCCGTCCCTGTCTCACCTGGAAGCTCTCCCACTCCTCTGGCCAGCCTGGGCATCTCCACCCAATATGAGTGATGGCGACTGATTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR TCA 90 bp CACTCAAGGAGGCCCCACTGGAAAAGCCAGGCAACTTCAGGCAGATaGCAGAGCCGGGACACTTTGAGCTCGAGGCACAGACCCTCATTC +
Preference number: 1 (lower is better)
Translates to: HSRRPHWKSQATSGR*QSRDTLSSRHRPSF
Trigger: GAATGAGGGTCTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGGCTTTTCCAGTGGGGCCTCCTTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 90 bp ACACTTCAGTGGGAAGGGGGAAGCCAGTGGGTGAACAGGAGGCTGTaGCCCGTGACTGACAGCAAGTCACTCTCACTGCAAACACAGGCT +
Preference number: 1 (lower is better)
Translates to: TLQWEGGSQWVNRRL*PVTDSKSLSLQTQA
Trigger: AGCCTGTGTTTGCAGTGAGAGTGACTTGCTGTCAGTCACGGGGCACAGCCTCCTGTTCACCCACTGGCTTCCCCCTTCCCACTGAAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 90 bp GTTCCTGAACACAAAGCTCTGACCCTGCCGATGCGCTTTAGGGCCTaGTTCCAAGGTCCTAAAGGCCAGGCCTTTCTGAGAGGACTAAGG +
Preference number: 1 (lower is better)
Translates to: VPEHKALTLPMRFRA*FQGPKGQAFLRGLR
Trigger: CCTTAGTCCTCTCAGAAAGGCCTGGCCTTTAGGACCTTGGAAGCAGGCCCTAAAGCGCATCGGCAGGGTCAGAGCTTTGTGTTCAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 90 bp GCTAAAGTAAGGGAATCAGTCGCCATCACTCATATTGGGTGGAGATaGCCAGGCTGGCCAGAGGAGTGGGAGAGCTTCCAGGTGAGACAG +
Preference number: 1 (lower is better)
Translates to: AKVRESVAITHIGWR*PGWPEEWESFQVRQ
Trigger: CTGTCTCACCTGGAAGCTCTCCCACTCCTCTGGCCAGCCTGGGCATCTCCACCCAATATGAGTGATGGCGACTGATTCCCTTACTTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR TCA 90 bp TACACCAGCTCTCAGCAGATCCCAGTGTTCCTGAACACAAAGCTCTaGCCCTGCCGATGCGCTTTAGGGCCTGCTTCCAAGGTCCTAAAG +
Preference number: 1 (lower is better)
Translates to: YTSSQQIPVFLNTKL*PCRCALGPASKVLK
Trigger: CTTTAGGACCTTGGAAGCAGGCCCTAAAGCGCATCGGCAGGGTCAGAGCTTTGTGTTCAGGAACACTGGGATCTGCTGAGAGCTGGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 90 bp AAACAGACAGTCAAACACCACACGTCCTGCCTCATAACCAGGAGCTaGCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGG +
Preference number: 1 (lower is better)
Translates to: KQTVKHHTSCLITRS*PTGNVGSESGRRMW
Trigger: CCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCCTGGTTATGAGGCAGGACGTGTGGTGTTTGACTGTCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 90 bp AGCTCACAGGAGTGGGCCTCCCATGAGATTGGTGAAGGAAGTGTCTaGCTCCATTTGTGCTGCTACAAGAGAATACCTGAGGCTGACTCA +
Preference number: 1 (lower is better)
Translates to: SSQEWASHEIGEGSV*LHLCCYKRIPEADS
Trigger: TGAGTCAGCCTCAGGTATTCTCTTGTAGCAGCACAAATGGAGGCAGACACTTCCTTCACCAATCTCATGGGAGGCCCACTCCTGTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 90 bp CACCAAGACGTGACTGTTTGGGTAGAGCTTTTTAACTATGCTGCTTaGGAGCTGCTGGTTCCTGAACCTAAGGAGCAGGGGCTCCTGTTG +
Preference number: 1 (lower is better)
Translates to: HQDVTVWVELFNYAA*ELLVPEPKEQGLLL
Trigger: CAACAGGAGCCCCTGCTCCTTAGGTTCAGGAACCAGCAGCTCCCAAGCAGCATAGTTAAAAAGCTCTACCCAAACAGTCACGTCTTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 90 bp GGGCTGGACTTACCCTTTCATAACATTAACTCCGCCCTTGGAGAGTaGAGCCCTCACAGCCTAATCACCTCTTACAGGCCCCATCTCTTA +
Preference number: 1 (lower is better)
Translates to: GLDLPFHNINSALGE*SPHSLITSYRPHLL
Trigger: TAAGAGATGGGGCCTGTAAGAGGTGATTAGGCTGTGAGGGCTCCACTCTCCAAGGGCGGAGTTAATGTTATGAAAGGGTAAGTCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 90 bp TTAAGTAAAACAGCTCAGAAACAGACAGTCAAACACCACACGTCCTaGCTCATAACCAGGAGCTGCCCAACAGGCAATGTGGGCTCAGAA +
Preference number: 1 (lower is better)
Translates to: LSKTAQKQTVKHHTS*LITRSCPTGNVGSE
Trigger: TTCTGAGCCCACATTGCCTGTTGGGCAGCTCCTGGTTATGAGGCAGGACGTGTGGTGTTTGACTGTCTGTTTCTGAGCTGTTTTACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 90 bp TTTACAACACAAACTAAAGCAGACAGGAAAAGCAGTGTGCAGTTTTaGAGCGGCTACACCAGCTCTCAGCAGATCCCAGTGTTCCTGAAC +
Preference number: 1 (lower is better)
Translates to: FTTQTKADRKSSVQF*SGYTSSQQIPVFLN
Trigger: GTTCAGGAACACTGGGATCTGCTGAGAGCTGGTGTAGCCGCTCCAAAACTGCACACTGCTTTTCCTGTCTGCTTTAGTTTGTGTTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 90 bp CTTCTTGTCTCATCCCATCTCATATTTTCCAGCTCTGTCTTTCTGTaGTGCACTTTGGGTCATTTCTTCAAACAGTTCCCGATTCTTCAG +
Preference number: 1 (lower is better)
Translates to: LLVSSHLIFSSSVFL*CTLGHFFKQFPILQ
Trigger: CTGAAGAATCGGGAACTGTTTGAAGAAATGACCCAAAGTGCAGCACAGAAAGACAGAGCTGGAAAATATGAGATGGGATGAGACAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR TCA 90 bp TTTACAATGAACGTATACTTCTTAGGATGTTTTCTATCTAAGGCCTaGTTTGGAGGTGGGTTTCTCACAGTTTCTACACTGTCTGCCGGG +
Preference number: 1 (lower is better)
Translates to: FTMNVYFLGCFLSKA*FGGGFLTVSTLSAG
Trigger: CCCGGCAGACAGTGTAGAAACTGTGAGAAACCCACCTCCAAATCAGGCCTTAGATAGAAAACATCCTAAGAAGTATACGTTCATTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR TCA 90 bp TCTGCCTTTCTGCTGGGCCTTGTTTATGGTACTGTGTGTGTGTGTTaGCAATTTCTTTCCTGTACCTTAGGATGTTTTGGTATCTCAAAA +
Preference number: 1 (lower is better)
Translates to: SAFLLGLVYGTVCVC*QFLSCTLGCFGISK
Trigger: TTTTGAGATACCAAAACATCCTAAGGTACAGGAAAGAAATTGTCAACACACACACACAGTACCATAAACAAGGCCCAGCAGAAAGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 90 bp TCTGACATAAAACAAAATGTATTAATCCTTCATTTCTCCCACAAATaGCGATGCGCACAAACTAAGCTAGCACCATCGCCAGGGAAATCA +
Preference number: 1 (lower is better)
Translates to: SDIKQNVLILHFSHK*RCAQTKLAPSPGKS
Trigger: TGATTTCCCTGGCGATGGTGCTAGCTTAGTTTGTGCGCATCGGCATTTGTGGGAGAAATGAAGGATTAATACATTTTGTTTTATGTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR TCA 90 bp TCTGGGTACACAATTCTAGGCTATCACTATTTTCTCCCAGGACTTTaGAGATATTATTTACTATCTTTCTGGCTTCCACTGTTGCTTTTA +
Preference number: 1 (lower is better)
Translates to: SGYTILGYHYFLPGL*RYYLLSFWLPLLLL
Trigger: TAAAAGCAACAGTGGAAGCCAGAAAGATAGTAAATAATATCTTCAAAGTCCTGGGAGAAAATAGTGATAGCCTAGAATTGTGTACCCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CAA 90 bp GCCCTGCGCCCTGCAGCCGACAGCTCACAGCCATGGGGCTGTCCTTaGCAGACTCGGCACCCACGTGCCCAGCCTGGGCCTCTGAGGCCT +
Preference number: 2 (lower is better)
Translates to: ALRPAADSSQPWGCP*QTRHPRAQPGPLRP
Trigger: AGGCCTCAGAGGCCCAGGCTGGGCACGTGGGTGCCGAGTCTGCAAAGGACAGCCCCATGGCTGTGAGCTGTCGGCTGCAGGGCGCAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CAA 90 bp GAGACACCGTCCCGTCCTCCCAGACAACCCTGTGTGGAGCCACGATaGGGACCCGGCGCCATCTGGAGCCCAGCACTCACACGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: ETPSRPPRQPCVEPR*GPGAIWSPALTRWA
Trigger: AGCCCACCGTGTGAGTGCTGGGCTCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACAGGGTTGTCTGGGAGGACGGGACGGTGTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp CAGACAACCCTGTGTGGAGCCACGATTGGGACCCGGCGCCATCTGGAGCCCAGCCACGGTGGGCTCCTCTaGGGCCACAGGAAGTCCAGG +
Preference number: 2 (lower is better)
Translates to: QTTLCGATIGTRRHLEPSHGGLL*GHRKSR
Trigger: CCTGGACTTCCTGTGGCCCCAGAGGAGCCCACCGTG...GCTGGGCTCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACAGGGTTGTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR TCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGAGCTGACTGCAGCGGGTaGGGCTGGACGGCCCCTCTC +
Preference number: 2 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGADCSG*GWTAPL
Trigger: GAGAGGGGCCGTCCAGCCTCACCCGCTGCAGTCAGC...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACGGACCCGGCGCCATCTaGAGCCCAGCACTCACACGG +
Preference number: 2 (lower is better)
Translates to: ELPNRQCGLRKWKADVGDGPGAI*SPALTR
Trigger: CCGTGTGAGTGCTGGGCTCCAGATGGCGCCGGGTCC...GTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp GGCCACCTAGCTGTTTCCTTGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCTCCCGGAAGCTGCCAGTaGTGGCCAGAGACACCGTCC +
Preference number: 2 (lower is better)
Translates to: GHLAVSLPIGELTAAGEAPGSCQ*WPETPS
Trigger: GGACGGTGTCTCTGGCCAGCACTGGCAGCTTCCGGG...AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACCCAGGCCCTGCGCCCTaGAGCCGACAGCTCACAGCC +
Preference number: 2 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDPGPAP*SRQLTA
Trigger: GGCTGTGAGCTGTCGGCTGCAGGGCGCAGGGCCTGG...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACCAGCCTGCAGACCCTaGACACCACCCCGCTTCCAG +
Preference number: 2 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGPACRP*TPPRFQ
Trigger: CTGGAAGCGGGGTGGTGTCCAGGGTCTGCAGGCTGG...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCGGCGCAGCAGACAGATaGGACGGGAAGACCCTGGAC +
Preference number: 2 (lower is better)
Translates to: SAMQPHQSRAHLYLARALGAADR*DGKTLD
Trigger: GTCCAGGGTCTTCCCGTCCCATCTGTCTGCTGCGCC...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGAGTGTGGAGCCACGATTaGGACCCGGCGCCATCTGGA +
Preference number: 2 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGVWSHD*DPAPSG
Trigger: TCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACAC...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CAA 90 bp CTATCTGGCCAGAGCACTCTGGCAGCCAGGGACCACTCCTACAGCTaGGAGCCCATGGAAATCACTCCAGCTGGCCAGCCGCACATCTGC +
Preference number: 2 (lower is better)
Translates to: LSGQSTLAARDHSYS*EPMEITPAGQPHIC
Trigger: GCAGATGTGCGGCTGGCCAGCTGGAGTGATTTCCATGGGCTCCAAGCTGTAGGAGTGGTCCCTGGCTGCCAGAGTGCTCTGGCCAGATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR TCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCCGCATAGCCCCACCCTaGGACATGCTGGAAGCAAGC +
Preference number: 2 (lower is better)
Translates to: SAMQPHQSRAHLYLARALRIAPP*DMLEAS
Trigger: GCTTGCTTCCAGCATGTCTCAGGGTGGGGCTATGCG...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR TCA 90 bp GAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACGGAGGCTGTGCCCCGTaGCTGACAGCAAGTCACTCT +
Preference number: 2 (lower is better)
Translates to: ELPNRQCGLRKWKADVGDGGCAP*LTASHS
Trigger: AGAGTGACTTGCTGTCAGTCACGGGGCACAGCCTCC...GTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp TTCCTCCCGTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGACTCGGCACCCACGTaGCCAGCCTGGGCCTCTGAG +
Preference number: 2 (lower is better)
Translates to: FLPSIRSTPSSWVITNYTDSAPT*PAWASE
Trigger: CTCAGAGGCCCAGGCTGGGCACGTGGGTGCCGAGTC...AGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGACGGGAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp GAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACCGGGACAGGCTAGGATaGTCCCAGATGCTGCAGCAC +
Preference number: 2 (lower is better)
Translates to: ELPNRQCGLRKWKADVGDRDRLG*SQMLQH
Trigger: GTGCTGCAGCATCTGGGAGCATCCTAGCCTGTCCCG...GTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGAGGGGACTTTCCCAGATaGAAACCAGGGCTCCCACCC +
Preference number: 2 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGGDFPR*KPGLPP
Trigger: GGGTGGGAGCCCTGGTTTCCATCTGGGAAAGTCCCC...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCGAAGGGGGAAGCCAGTaGGTGAACAGGAGGCTGTGC +
Preference number: 2 (lower is better)
Translates to: SAMQPHQSRAHLYLARALEGGSQ*VNRRLC
Trigger: GCACAGCCTCCTGTTCACCCACTGGCTTCCCCCTTC...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCGGCGGCACCTCACTCTaGAGTGGAGTGCTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: SAMQPHQSRAHLYLARALGGTSL*SGVLPS
Trigger: GGAAGGAAGCACTCCACTCCAGAGTGAGGTGCCGCC...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR TCA 90 bp TTCCTCCCGTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCTCCTGGAGGGCTCTaGGGAGGAACAGAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: FLPSIRSTPSSWVITNYTAPGGL*GGTEVG
Trigger: CCCCACCTCTGTTCCTCCTCAGAGCCCTCCAGGAGC...AGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGACGGGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR TCA 90 bp GGCCACCTAGCTGTTTCCTTGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCTTCCCTCTCCCCCAAATaGAACCAGAGCTCCCAAGGG +
Preference number: 2 (lower is better)
Translates to: GHLAVSLPIGELTAAGEASLSPK*NQSSQG
Trigger: CCCTTGGGAGCTCTGGTTTCATTTGGGGGAGAGGGA...AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCGTGAACAGGAGGCTGTaGCCCGTGACTGACAGCAAG +
Preference number: 2 (lower is better)
Translates to: SAMQPHQSRAHLYLARALVNRRL*PVTDSK
Trigger: CTTGCTGTCAGTCACGGGGCACAGCCTCCTGTTCAC...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCACCAGCACTCACACGGTaGGCTCCTCTGGGGCCACAG +
Preference number: 2 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSPALTR*APLGPQ
Trigger: CTGTGGCCCCAGAGGAGCCCACCGTGTGAGTGCTGG...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGAGAGCTCACACTTCAGTaGGAAGGGGGAAGCCAGTGG +
Preference number: 2 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGELTLQ*EGGSQW
Trigger: CCACTGGCTTCCCCCTTCCCACTGAAGTGTGAGCTC...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCAGGCTCCCTGCCTGCTTaGCCCTCTGTGGCCACCCTA +
Preference number: 2 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSGSLPA*PSVATL
Trigger: TAGGGTGGCCACAGAGGGCCAAGCAGGCAGGGAGCC...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGAGAATCCATCCTGCGCTaGGCGCTTCCAGACCATGAC +
Preference number: 2 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGESILR*ALPDHD
Trigger: GTCATGGTCTGGAAGCGCCCAGCGCAGGATGGATTC...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR TCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGAGCAACTTCAGGCAGATaGCAGAGCCGGGACACTTTG +
Preference number: 2 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGATSGR*QSRDTL
Trigger: CAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGC...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR TCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGAAGCTACCCAGGAGGCTaGGGCAGGAAAATCACTGGA +
Preference number: 2 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGSYPGG*GRKITG
Trigger: TCCAGTGATTTTCCTGCCTCAGCCTCCTGGGTAGCT...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGAGACAGCTCACAGCCATaGGGCTGTCCTTTGCAGACT +
Preference number: 2 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGDSSQP*GCPLQT
Trigger: AGTCTGCAAAGGACAGCCCCATGGCTGTGAGCTGTC...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGCCTCCCCTGCTGGCCTaGAGCCATGCCAAGTGCTTC +
Preference number: 2 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLPPLLA*SHAKCF
Trigger: GAAGCACTTGGCATGGCTGCAGGCCAGCAGGGGAGG...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACCATATTGGGTGGAGATaGCCAGGCTGGCCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDHIGWR*PGWPEE
Trigger: CTCCTCTGGCCAGCCTGGGCATCTCCACCCAATATG...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGGGAAGCTGCCAGTGCTaGCCAGAGACACCGTCCCGT +
Preference number: 2 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLGSCQC*PETPSR
Trigger: ACGGGACGGTGTCTCTGGCCAGCACTGGCAGCTTCC...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp TTCCTCCCGTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTTCATGCCAGGCAGAGTaGGGTACAAGGCCCGGAAGC +
Preference number: 2 (lower is better)
Translates to: FLPSIRSTPSSWVITNYTSCQAE*GTRPGS
Trigger: GCTTCCGGGCCTTGTACCCCACTCTGCCTGGCATGA...AGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGACGGGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp CCAGGCAACTTCAGGCAGATGACAGAGCCGGGACACTTTGAGCTCGAGGCACAGAGGTTGCAGGGATGCTaGTCTGGAATCCATCCTGCG +
Preference number: 2 (lower is better)
Translates to: PGNFRQMTEPGHFELEAQRLQGC*SGIHPA
Trigger: CGCAGGATGGATTCCAGACCAGCATCCCTGCAACCT...CTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp CCAGGCAACTTCAGGCAGATGACAGAGCCGGGACACTTTGAGCTCGAGGCACAGCACTCCTGGCTGAGCTaGAGAGAAAACTGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: PGNFRQMTEPGHFELEAQHSWLS*RENWLG
Trigger: TCCCAGCCAGTTTTCTCTCCAGCTCAGCCAGGAGTG...CTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGATCAAGGAGGCCCCACTaGAAAAGCCAGGCAACTTCA +
Preference number: 2 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGSRRPH*KSQATS
Trigger: TGAAGTTGCCTGGCTTTTCCAGTGGGGCCTCCTTGA...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACTCCGCCCTTGGAGAGTaGAGCCCTCACAGCCTAATC +
Preference number: 2 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDSALGE*SPHSLI
Trigger: GATTAGGCTGTGAGGGCTCCACTCTCCAAGGGCGGA...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR TCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCGCTCATGCCTGTAATTaGGACCATCCTGGCCAACAT +
Preference number: 2 (lower is better)
Translates to: SAMQPHQSRAHLYLARALAHACN*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATTACAGGCATGAGC...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGACAAGGCCCGGAAGCTaGCAGTGCTGGCCAGAGACA +
Preference number: 2 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLTRPGS*QCWPET
Trigger: TGTCTCTGGCCAGCACTGGCAGCTTCCGGGCCTTGT...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGCCAGACAACCCTGTGTaGAGCCACGATTGGGACCCG +
Preference number: 2 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLPDNPV*SHDWDP
Trigger: CGGGTCCCAATCGTGGCTCCACACAGGGTTGTCTGG...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCACCCCAAAACCGCCATaGCTGCAGATTTCTAGAGAG +
Preference number: 2 (lower is better)
Translates to: SAMQPHQSRAHLYLARALTPKPP*LQISRE
Trigger: CTCTCTAGAAATCTGCAGCCATGGCGGTTTTGGGGT...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACCACCTCACTCTGGAGTaGAGTGCTTCCTTCCTGGCT +
Preference number: 2 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDHLTLE*SASFLA
Trigger: AGCCAGGAAGGAAGCACTCCACTCCAGAGTGAGGTG...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCCCCTCATTCCAGGGGTaGATGCCCCTCATGCAGGAG +
Preference number: 2 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSPSFQG*MPLMQE
Trigger: CTCCTGCATGAGGGGCATGCACCCCTGGAATGAGGG...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGAACAGGAAAAGCAGTGTaGAGTTTTGGAGCGGCTACA +
Preference number: 2 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGTGKAV*SFGAAT
Trigger: TGTAGCCGCTCCAAAACTGCACACTGCTTTTCCTGT...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACCTTGGCCTCCCAAAGTaGTGGGAATACAGACGTGAG +
Preference number: 2 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDLGLPK*WEYRRE
Trigger: CTCACGTCTGTATTCCCAGCACTTTGGGAGGCCAAG...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCAGGGAAACATGGGAGATaGGCACAGCCTTCCACAAGC +
Preference number: 2 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSGKHGR*AQPSTS
Trigger: GCTTGTGGAAGGCTGTGCCCATCTCCCATGTTTCCC...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCGGCCTGATTTGGAGGTaGGTTTCTCACAGTTTCTAC +
Preference number: 2 (lower is better)
Translates to: SAMQPHQSRAHLYLARALGLIWR*VSHSFY
Trigger: GTAGAAACTGTGAGAAACCCACCTCCAAATCAGGCC...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCATTCCACCTTCTGGCTaGGAGACTGCCCCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSIPPSG*ETAPPR
Trigger: CCTGGGAGGGGCAGTCTCCCAGCCAGAAGGTGGAAT...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACATCACTCATATTGGGTaGAGATGCCCAGGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDITHIG*RCPGWP
Trigger: TGGCCAGCCTGGGCATCTCCACCCAATATGAGTGAT...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CAA 90 bp CCTGGGGAACTAGAGGCAGCTCACAGGAGTGGGCCTCCCATGAGATaGGTGAAGGAAGTGTCTGCCTCCATTTGTGCTGCTACAAGAGAA +
Preference number: 2 (lower is better)
Translates to: PGELEAAHRSGPPMR*VKEVSASICAATRE
Trigger: TTCTCTTGTAGCAGCACAAATGGAGGCAGACACTTCCTTCACCAATCTCATGGGAGGCCCACTCCTGTGAGCTGCCTCTAGTTCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR TCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACAACTGGCTGGGAAGCTaGTCAAATGTCTCCATGCCA +
Preference number: 2 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDNWLGS*SNVSMP
Trigger: TGGCATGGAGACATTTGATCAGCTTCCCAGCCAGTT...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCGATCACAAACTACACTaGAGCTCAGAGCTGCCTTTA +
Preference number: 2 (lower is better)
Translates to: SAMQPHQSRAHLYLARALDHKLH*SSELPL
Trigger: TAAAGGCAGCTCTGAGCTGCAGTGTAGTTTGTGATC...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp CCAGGCAACTTCAGGCAGATGACAGAGCCGGGACACTTTGAGCTCGAGGCACAGAAAAGGTTGCAGGGATaGTGGTCTGGAATCCATCCT +
Preference number: 2 (lower is better)
Translates to: PGNFRQMTEPGHFELEAQKRLQG*WSGIHP
Trigger: AGGATGGATTCCAGACCAGCATCCCTGCAACCTTTT...CTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACAGGAACTGGCCGACTTaGGAATTCCACCTCCAAGAT +
Preference number: 2 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDRNWPT*EFHLQD
Trigger: ATCTTGGAGGTGGAATTCCCAAGTCGGCCAGTTCCT...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR TCA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCCTGAGCCCAGAAGGTTaGGGCTGTAGTGAGCTGTGT +
Preference number: 2 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSLSPEG*GCSELC
Trigger: ACACAGCTCACTACAGCCTCAACCTTCTGGGCTCAG...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR TCA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCGGCAGGAGAATCATCTaGGCCCAGAAGGTTGAGGCT +
Preference number: 2 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSGRRII*AQKVEA
Trigger: AGCCTCAACCTTCTGGGCTCAGATGATTCTCCTGCC...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACTGCAAACACAGGCTATaGCAAAACCCAGCACACACA +
Preference number: 2 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDCKHRL*QNPAHT
Trigger: TGTGTGTGCTGGGTTTTGGCATAGCCTGTGTTTGCA...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCACAAAACCGCCATGGCTaGAGATTTCTAGAGAGCACC +
Preference number: 2 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSQNRHG*RFLEST
Trigger: GGTGCTCTCTAGAAATCTGCAGCCATGGCGGTTTTG...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CAA 90 bp GCTTGGGAGCTGCTGGTTCCTGAACCTAAGGAGCAGGGGCTCCTGTaGGTTTGGGAAAGTTCTCAGCCGTATTTCTCTGAATACTTGCCT +
Preference number: 2 (lower is better)
Translates to: AWELLVPEPKEQGLL*VWESSQPYFSEYLP
Trigger: AGGCAAGTATTCAGAGAAATACGGCTGAGAACTTTCCCAAACCAACAGGAGCCCCTGCTCCTTAGGTTCAGGAACCAGCAGCTCCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGTGGCTCATCCCTGTGTaGTTCTCGATGTGTAGACAC +
Preference number: 2 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLWLIPV*FSMCRH
Trigger: GTGTCTACACATCGAGAAGCACACAGGGATGAGCCA...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACAGAGTCTTGATATGTTaGCCAGGCTGCTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDRVLIC*PGCSQT
Trigger: AGTTTGAGAGCAGCCTGGGCAACATATCAAGACTCT...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACCACAACTGCACCTTATaGCTTGAATTCACACACACA +
Preference number: 2 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDHNCTL*LEFTHT
Trigger: TGTGTGTGTGAATTCAAGGCATAAGGTGCAGTTGTG...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCGAACATTGGTGTGTGTaGTTCTGTCTGCCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSEHWCV*FCLPFC
Trigger: GCAGAAAGGCAGACAGAAGCACACACACCAATGTTC...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCTCTACACCCTCCTCCTaGGTGATCACAAACTACACT +
Preference number: 2 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSSTPSS*VITNYT
Trigger: AGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGA...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACTTCTGTGCTGCACTTTaGGTCATTTCTTCAAACAGT +
Preference number: 2 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDFCAAL*VISSNS
Trigger: ACTGTTTGAAGAAATGACCCAAAGTGCAGCACAGAA...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCGGCAGAACTCTGCCCTaGTGGCTCCTGAGCCCTGCG +
Preference number: 2 (lower is better)
Translates to: VPENFSLRESDIKQNVLIGRTLP*WLLSPA
Trigger: CGCAGGGCTCAGGAGCCAGCAGGGCAGAGTTCTGCC...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCTTCTGGCTGGGAGACTaGCCCTCCCAGGCCAGCCAG +
Preference number: 2 (lower is better)
Translates to: VPENFSLRESDIKQNVLIFWLGD*PSQASQ
Trigger: CTGGCTGGCCTGGGAGGGGCAGTCTCCCAGCCAGAA...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCAGCTCTGTCTTTCTGTaGTGCACTTTGGGTCATTTC +
Preference number: 2 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSSSVFL*CTLGHF
Trigger: GAAATGACCCAAAGTGCAGCACAGAAAGACAGAGCT...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCGGGACGGGAAGACCCTaGACAGAGGCCAAAGGCCCC +
Preference number: 2 (lower is better)
Translates to: VPENFSLRESDIKQNVLIGTGRP*TEAKGP
Trigger: GGGGCCTTTGGCCTCTGTCCAGGGTCTTCCCGTCCC...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCTTCTCCTTGAAGGACTaGCTTTTAAATTCCATGGTC +
Preference number: 2 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSFSLKD*LLNSMV
Trigger: GACCATGGAATTTAAAAGCCAGTCCTTCAAGGAGAA...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR TCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCGCTGTGCCCCGTGACTaGCAGCAAGTCACTCTCACT +
Preference number: 2 (lower is better)
Translates to: VPENFSLRESDIKQNVLIAVPRD*QQVTLT
Trigger: AGTGAGAGTGACTTGCTGTCAGTCACGGGGCACAGC...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCAGAGGTGGGGAAACATaGGAGATGGGCACAGCCTTC +
Preference number: 2 (lower is better)
Translates to: VPENFSLRESDIKQNVLIRGGET*EMGTAF
Trigger: GAAGGCTGTGCCCATCTCCCATGTTTCCCCACCTCT...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCAGTGAGCTGTGTTTATaGCACTCCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: VPENFSLRESDIKQNVLISELCL*HSTPAW
Trigger: CCAGGCTGGAGTGGAGTGGCATAAACACAGCTCACT...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCAGCAGTGTGCAGTTTTaGAGCGGCTACACCAGCTCT +
Preference number: 2 (lower is better)
Translates to: VPENFSLRESDIKQNVLISSVQF*SGYTSS
Trigger: AGAGCTGGTGTAGCCGCTCCAAAACTGCACACTGCT...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCAAAAATTCCACCTTCTaGCTGGGAGACTGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: VPENFSLRESDIKQNVLIKNSTF*LGDCPS
Trigger: GGAGGGGCAGTCTCCCAGCCAGAAGGTGGAATTTTT...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CAA 90 bp GTCTGCCTTTCTGCTGGGCCTTGTTTATGGTACTGTGTGTGTGTGTaGACAATTTCTTTCCTGTACCTTAGGATGTTTTGGTATCTCAAA +
Preference number: 2 (lower is better)
Translates to: VCLSAGPCLWYCVCV*TISFLYLRMFWYLK
Trigger: TTTGAGATACCAAAACATCCTAAGGTACAGGAAAGAAATTGTCAACACACACACACAGTACCATAAACAAGGCCCAGCAGAAAGGCAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CAA 90 bp TCATCCCATCTCATATTTTCCAGCTCTGTCTTTCTGTGCTGCACTTaGGGTCATTTCTTCAAACAGTTCCCGATTCTTCAGGAAACACAT +
Preference number: 2 (lower is better)
Translates to: SSHLIFSSSVFLCCT*GHFFKQFPILQETH
Trigger: ATGTGTTTCCTGAAGAATCGGGAACTGTTTGAAGAAATGACCCAAAGTGCAGCACAGAAAGACAGAGCTGGAAAATATGAGATGGGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR TCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCTCCAAGATGGTGCTTTaGACACTGGAGGGCAAGAGA +
Preference number: 2 (lower is better)
Translates to: VPENFSLRESDIKQNVLISKMVL*TLEGKR
Trigger: TCTCTTGCCCTCCAGTGTTCAAAGCACCATCTTGGA...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR GCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCGCAAGTCACTCTCACTaGAAACACAGGCTATGCCAA +
Preference number: 2 (lower is better)
Translates to: VPENFSLRESDIKQNVLIASHSH*KHRLCQ
Trigger: TTGGCATAGCCTGTGTTTGCAGTGAGAGTGACTTGC...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CAA 90 bp GAATTACTCGTAAATTGCGGATGTCATACTAAACTCTCCATCTTCTaGTCTCATCCCATCTCATATTTTCCAGCTCTGTCTTTCTGTGCT +
Preference number: 2 (lower is better)
Translates to: ELLVNCGCHTKLSIF*SHPISYFPALSFCA
Trigger: AGCACAGAAAGACAGAGCTGGAAAATATGAGATGGGATGAGACAAGAAGATGGAGAGTTTAGTATGACATCCGCAATTTACGAGTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCGGAGAGAAAACTGGCTaGGAAGCTGATCAAATGTCT +
Preference number: 2 (lower is better)
Translates to: VPENFSLRESDIKQNVLIGEKTG*EADQMS
Trigger: AGACATTTGATCAGCTTCCCAGCCAGTTTTCTCTCC...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCGAAAGACGGATTTTCTaGGTACACAATTCTAGGCTA +
Preference number: 2 (lower is better)
Translates to: VPENFSLRESDIKQNVLIERRIF*VHNSRL
Trigger: TAGCCTAGAATTGTGTACCCAGAAAATCCGTCTTTC...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CAA 90 bp TTCTGGGTACACAATTCTAGGCTATCACTATTTTCTCCCAGGACTTaGAAGATATTATTTACTATCTTTCTGGCTTCCACTGTTGCTTTT +
Preference number: 2 (lower is better)
Translates to: FWVHNSRLSLFSPRT*KILFTIFLASTVAF
Trigger: AAAAGCAACAGTGGAAGCCAGAAAGATAGTAAATAATATCTTCAAAGTCCTGGGAGAAAATAGTGATAGCCTAGAATTGTGTACCCAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 72 bp CGGGTGAGGCTGGACGGCCCCTCTCTTCCCTCCAGCTaGAGCCGCTTCCTCCCGTCCATCCGCTCTACACCC +
Preference number: 3 (lower is better)
Translates to: RVRLDGPSLPSS*SRFLPSIRSTP
Trigger: GGGTGTAGAGCGGATGGACGGGAGGAAGCGGCTGCAGCTGGAGGGAAGAGAGGGGCCGTCCAGCCTCACCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 72 bp CCCTGTGTGGAGCCACGATTGGGACCCGGCGCCATCTaGAGCCCAGCACTCACACGGTGGGCTCCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: PCVEPRLGPGAI*SPALTRWAPLG
Trigger: CCCCAGAGGAGCCCACCGTGTGAGTGCTGGGCTCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 72 bp CAGGCCCTGCGCCCTGCAGCCGACAGCTCACAGCCATaGGGCTGTCCTTTGCAGACTCGGCACCCACGTGCC +
Preference number: 3 (lower is better)
Translates to: QALRPAADSSQP*GCPLQTRHPRA
Trigger: GGCACGTGGGTGCCGAGTCTGCAAAGGACAGCCCCATGGCTGTGAGCTGTCGGCTGCAGGGCGCAGGGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 72 bp CTGCAGCCGACAGCTCACAGCCATGGGGCTGTCCTTTaGAGACTCGGCACCCACGTGCCCAGCCTGGGCCTC +
Preference number: 3 (lower is better)
Translates to: LQPTAHSHGAVL*RLGTHVPSLGL
Trigger: GAGGCCCAGGCTGGGCACGTGGGTGCCGAGTCTGCAAAGGACAGCCCCATGGCTGTGAGCTGTCGGCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 72 bp CCCGTCCTCCCAGACAACCCTGTGTGGAGCCACGATTaGGACCCGGCGCCATCTGGAGCCCAGCACTCACAC +
Preference number: 3 (lower is better)
Translates to: PVLPDNPVWSHD*DPAPSGAQHSH
Trigger: GTGTGAGTGCTGGGCTCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACAGGGTTGTCTGGGAGGACGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 72 bp CAGAGACACCGTCCCGTCCTCCCAGACAACCCTGTGTaGAGCCACGATTGGGACCCGGCGCCATCTGGAGCC +
Preference number: 3 (lower is better)
Translates to: QRHRPVLPDNPV*SHDWDPAPSGA
Trigger: GGCTCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACAGGGTTGTCTGGGAGGACGGGACGGTGTCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 72 bp AGTCACAGTCCTAGCTTGGGCTCCCTGCCCCAGGGTTaGCACGTGGAGCACTGCCCTGGGTCTCCATGGCCC +
Preference number: 3 (lower is better)
Translates to: SHSPSLGSLPQG*HVEHCPGSPWP
Trigger: GGGCCATGGAGACCCAGGGCAGTGCTCCACGTGCCAACCCTGGGGCAGGGAGCCCAAGCTAGGACTGTGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 72 bp CAGGCAGAGTGGGGTACAAGGCCCGGAAGCTGCCAGTaGTGGCCAGAGACACCGTCCCGTCCTCCCAGACAA +
Preference number: 3 (lower is better)
Translates to: QAEWGTRPGSCQ*WPETPSRPPRQ
Trigger: TTGTCTGGGAGGACGGGACGGTGTCTCTGGCCAGCACTGGCAGCTTCCGGGCCTTGTACCCCACTCTGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 72 bp ACAGCCCAGACAGTCACAGTCCTAGCTTGGGCTCCCTaGCCCAGGGTTGGCACGTGGAGCACTGCCCTGGGT +
Preference number: 3 (lower is better)
Translates to: TAQTVTVLAWAP*PRVGTWSTALG
Trigger: ACCCAGGGCAGTGCTCCACGTGCCAACCCTGGGGCAGGGAGCCCAAGCTAGGACTGTGACTGTCTGGGCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 72 bp GCCAGGCAGGGCACCTACAAGGGGGACTTTCCCAGATaGAAACCAGGGCTCCCACCCAGTAGGCGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: ARQGTYKGDFPR*KPGLPPSRRSR
Trigger: TCTGCTGCGCCTACTGGGTGGGAGCCCTGGTTTCCATCTGGGAAAGTCCCCCTTGTAGGTGCCCTGCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 72 bp GGCACAGGATGGCTCAGGCGGCACCTCACTCTGGAGTaGAGTGCTTCCTTCCTGGCTCACCTCCTAGCCCTC +
Preference number: 3 (lower is better)
Translates to: GTGWLRRHLTLE*SASFLAHLLAL
Trigger: GAGGGCTAGGAGGTGAGCCAGGAAGGAAGCACTCCACTCCAGAGTGAGGTGCCGCCTGAGCCATCCTGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CAA 90 bp GGCCACCTAGCTGTTTCCTTGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCTCCATGGGGCTGTCCTTaGCAGACTCGGCACCCACGT +
Preference number: 3 (lower is better)
Translates to: GHLAVSLPIGELTAAGEAPWGCP*QTRHPR
Trigger: ACGTGGGTGCCGAGTCTGCAAAGGACAGCCCCATGG...AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR TCA 72 bp TCTGGAATCCATCCTGCGCTGGGCGCTTCCAGACCATaGCCTGTCCAAGAGGGGCTGAAGGCCACCGGCTCT +
Preference number: 3 (lower is better)
Translates to: SGIHPALGASRP*PVQEGLKATGS
Trigger: AGAGCCGGTGGCCTTCAGCCCCTCTTGGACAGGTCATGGTCTGGAAGCGCCCAGCGCAGGATGGATTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR TCA 72 bp CTTCCAGGTGAGACAGGGACGGCTCCAGGTGAGCCCTaGTGGAGTCTGTGGCCTGGGGAACTAGAGGCAGCT +
Preference number: 3 (lower is better)
Translates to: LPGETGTAPGEP*WSLWPGELEAA
Trigger: AGCTGCCTCTAGTTCCCCAGGCCACAGACTCCATCAGGGCTCACCTGGAGCCGTCCCTGTCTCACCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 72 bp CCATCTGGAGCCCAGCACTCACACGGTGGGCTCCTCTaGGGCCACAGGAAGTCCAGGGAGAAAACAACCCAC +
Preference number: 3 (lower is better)
Translates to: PSGAQHSHGGLL*GHRKSREKTTH
Trigger: GTGGGTTGTTTTCTCCCTGGACTTCCTGTGGCCCCAGAGGAGCCCACCGTGTGAGTGCTGGGCTCCAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 72 bp TGGCAGCCAGGGACCACTCCTACAGCTTGGAGCCCATaGAAATCACTCCAGCTGGCCAGCCGCACATCTGCC +
Preference number: 3 (lower is better)
Translates to: WQPGTTPTAWSP*KSLQLASRTSA
Trigger: GGCAGATGTGCGGCTGGCCAGCTGGAGTGATTTCCATGGGCTCCAAGCTGTAGGAGTGGTCCCTGGCTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 72 bp GGCACAGACCCTCATTCCAGGGGTGCATGCCCCTCATaGAGGAGACACCAGCTCTTGGTGACACAGGCCACA +
Preference number: 3 (lower is better)
Translates to: GTDPHSRGACPS*RRHQLLVTQAT
Trigger: TGTGGCCTGTGTCACCAAGAGCTGGTGTCTCCTGCATGAGGGGCATGCACCCCTGGAATGAGGGTCTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 72 bp GCCAGTGGGGCTGAAAAGGTTGCAGGGATGCTGGTCTaGAATCCATCCTGCGCTGGGCGCTTCCAGACCATG +
Preference number: 3 (lower is better)
Translates to: ASGAEKVAGMLV*NPSCAGRFQTM
Trigger: CATGGTCTGGAAGCGCCCAGCGCAGGATGGATTCCAGACCAGCATCCCTGCAACCTTTTCAGCCCCACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 72 bp CAGGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTaGAAGGCGGATGTGGGGGACTCTAACGAGGGGAGG +
Preference number: 3 (lower is better)
Translates to: QELPNRQCGLRK*KADVGDSNEGR
Trigger: CCTCCCCTCGTTAGAGTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CAA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACACCCTAACGTCCAGCTaGGTGGCCCAAACGCCTGCC +
Preference number: 3 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDTLTSS*VAQTPA
Trigger: GGCAGGCGTTTGGGCCACCAAGCTGGACGTTAGGGT...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 72 bp ACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTaGGGGACTCTAACGAGGGGAGGCAGGAGGTGTGAG +
Preference number: 3 (lower is better)
Translates to: TGNVGSESGRRM*GTLTRGGRRCE
Trigger: CTCACACCTCCTGCCTCCCCTCGTTAGAGTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 72 bp CTCCTACAGCTTGGAGCCCATGGAAATCACTCCAGCTaGCCAGCCGCACATCTGCCCTGCCTTGCCTTTCCT +
Preference number: 3 (lower is better)
Translates to: LLQLGAHGNHSS*PAAHLPCLAFP
Trigger: AGGAAAGGCAAGGCAGGGCAGATGTGCGGCTGGCCAGCTGGAGTGATTTCCATGGGCTCCAAGCTGTAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CAA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGTGTGTGGAGCCACGATaGGGACCCGGCGCCATCTGG +
Preference number: 3 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLCVEPR*GPGAIW
Trigger: CCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACA...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CAA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGAAAGCAGTGTGCAGTTTaGGAGCGGCTACACCAGCTC +
Preference number: 3 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGKQCAV*ERLHQL
Trigger: GAGCTGGTGTAGCCGCTCCAAAACTGCACACTGCTT...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR TCA 72 bp AGGCAACTTCAGGCAGATGACAGAGCCGGGACACTTTaGGCTCGAGGCACAGACCCTCATTCCAGGGGTGCA +
Preference number: 3 (lower is better)
Translates to: RQLQADDRAGTL*ARGTDPHSRGA
Trigger: TGCACCCCTGGAATGAGGGTCTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR TCA 72 bp AGGCCCCACTGGAAAAGCCAGGCAACTTCAGGCAGATaGCAGAGCCGGGACACTTTGAGCTCGAGGCACAGA +
Preference number: 3 (lower is better)
Translates to: RPHWKSQATSGR*QSRDTLSSRHR
Trigger: TCTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGGCTTTTCCAGTGGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR TCA 72 bp GGCCGACTTGGGAATTCCACCTCCAAGATGGTGCTTTaGACACTGGAGGGCAAGAGAGGCACAAGCGGGCTG +
Preference number: 3 (lower is better)
Translates to: GRLGNSTSKMVL*TLEGKRGTSGL
Trigger: CAGCCCGCTTGTGCCTCTCTTGCCCTCCAGTGTTCAAAGCACCATCTTGGAGGTGGAATTCCCAAGTCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CAA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCCAGAGTCTTGATATGTaGCCCAGGCTGCTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: SAMQPHQSRAHLYLARALQSLDM*PRLLSN
Trigger: GTTTGAGAGCAGCCTGGGCAACATATCAAGACTCTG...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR TCA 72 bp TCCTCCCGTCCATCCGCTCTACACCCTCCTCCTGGGTaGTCACAAACTACACTGCAGCTCAGAGCTGCCTTT +
Preference number: 3 (lower is better)
Translates to: SSRPSALHPPPG*SQTTLQLRAAF
Trigger: AAAGGCAGCTCTGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGACGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 72 bp CACAAAGCTCTGACCCTGCCGATGCGCTTTAGGGCCTaGTTCCAAGGTCCTAAAGGCCAGGCCTTTCTGAGA +
Preference number: 3 (lower is better)
Translates to: HKALTLPMRFRA*FQGPKGQAFLR
Trigger: TCTCAGAAAGGCCTGGCCTTTAGGACCTTGGAAGCAGGCCCTAAAGCGCATCGGCAGGGTCAGAGCTTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CAA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACCACCTAGCTGTTTCCTaGCCCATAGGAGAGCTGACT +
Preference number: 3 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDHLAVS*PIGELT
Trigger: AGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTG...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR TCA 72 bp AAGCCAGTGGGTGAACAGGAGGCTGTGCCCCGTGACTaGCAGCAAGTCACTCTCACTGCAAACACAGGCTAT +
Preference number: 3 (lower is better)
Translates to: KPVGEQEAVPRD*QQVTLTANTGY
Trigger: ATAGCCTGTGTTTGCAGTGAGAGTGACTTGCTGTCAGTCACGGGGCACAGCCTCCTGTTCACCCACTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR TCA 72 bp TCTCAGCAGATCCCAGTGTTCCTGAACACAAAGCTCTaGCCCTGCCGATGCGCTTTAGGGCCTGCTTCCAAG +
Preference number: 3 (lower is better)
Translates to: SQQIPVFLNTKL*PCRCALGPASK
Trigger: CTTGGAAGCAGGCCCTAAAGCGCATCGGCAGGGTCAGAGCTTTGTGTTCAGGAACACTGGGATCTGCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 72 bp GTCAAACACCACACGTCCTGCCTCATAACCAGGAGCTaGCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGG +
Preference number: 3 (lower is better)
Translates to: VKHHTSCLITRS*PTGNVGSESGR
Trigger: CCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCCTGGTTATGAGGCAGGACGTGTGGTGTTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 72 bp AAAGTAAGGGAATCAGTCGCCATCACTCATATTGGGTaGAGATGCCCAGGCTGGCCAGAGGAGTGGGAGAGC +
Preference number: 3 (lower is better)
Translates to: KVRESVAITHIG*RCPGWPEEWES
Trigger: GCTCTCCCACTCCTCTGGCCAGCCTGGGCATCTCCACCCAATATGAGTGATGGCGACTGATTCCCTTACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 72 bp ACCAAGCGCTGGCGAGGACGCAGTATGACAAGAACCTaGCACACTTCTGGTGGGAATGTAAATGCTGCACTC +
Preference number: 3 (lower is better)
Translates to: TKRWRGRSMTRT*HTSGGNVNAAL
Trigger: GAGTGCAGCATTTACATTCCCACCAGAAGTGTGCCAGGTTCTTGTCATACTGCGTCCTCGCCAGCGCTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 72 bp ACAGCTCAGAAACAGACAGTCAAACACCACACGTCCTaGCTCATAACCAGGAGCTGCCCAACAGGCAATGTG +
Preference number: 3 (lower is better)
Translates to: TAQKQTVKHHTS*LITRSCPTGNV
Trigger: CACATTGCCTGTTGGGCAGCTCCTGGTTATGAGGCAGGACGTGTGGTGTTTGACTGTCTGTTTCTGAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CAA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCCCTGGCCCCTCATTCTaGAAAGACGGATTTTCTGGG +
Preference number: 3 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSPGPSF*KDGFSG
Trigger: CCCAGAAAATCCGTCTTTCAAGAATGAGGGGCCAGG...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 72 bp CAAACTAAAGCAGACAGGAAAAGCAGTGTGCAGTTTTaGAGCGGCTACACCAGCTCTCAGCAGATCCCAGTG +
Preference number: 3 (lower is better)
Translates to: QTKADRKSSVQF*SGYTSSQQIPV
Trigger: CACTGGGATCTGCTGAGAGCTGGTGTAGCCGCTCCAAAACTGCACACTGCTTTTCCTGTCTGCTTTAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 72 bp GTGACTGTTTGGGTAGAGCTTTTTAACTATGCTGCTTaGGAGCTGCTGGTTCCTGAACCTAAGGAGCAGGGG +
Preference number: 3 (lower is better)
Translates to: VTVWVELFNYAA*ELLVPEPKEQG
Trigger: CCCCTGCTCCTTAGGTTCAGGAACCAGCAGCTCCCAAGCAGCATAGTTAAAAAGCTCTACCCAAACAGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 72 bp TTACCCTTTCATAACATTAACTCCGCCCTTGGAGAGTaGAGCCCTCACAGCCTAATCACCTCTTACAGGCCC +
Preference number: 3 (lower is better)
Translates to: LPFHNINSALGE*SPHSLITSYRP
Trigger: GGGCCTGTAAGAGGTGATTAGGCTGTGAGGGCTCCACTCTCCAAGGGCGGAGTTAATGTTATGAAAGGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 72 bp GTTCCTGAACCTAAGGAGCAGGGGCTCCTGTTGGTTTaGGAAAGTTCTCAGCCGTATTTCTCTGAATACTTG +
Preference number: 3 (lower is better)
Translates to: VPEPKEQGLLLV*ESSQPYFSEYL
Trigger: CAAGTATTCAGAGAAATACGGCTGAGAACTTTCCCAAACCAACAGGAGCCCCTGCTCCTTAGGTTCAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CAA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCAGAGGGGCTCTTTTGTaGACTGACACTTTCCTTTTT +
Preference number: 3 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSRGALL*TDTFLF
Trigger: AAAAAGGAAAGTGTCAGTCAACAAAAGAGCCCCTCT...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR TCA 72 bp CCTGTTGGTTTGGGAAAGTTCTCAGCCGTATTTCTCTaGATACTTGCCTCCACCCCATATTCTCTTTCCCCT +
Preference number: 3 (lower is better)
Translates to: PVGLGKFSAVFL*ILASTPYSLSP
Trigger: AGGGGAAAGAGAATATGGGGTGGAGGCAAGTATTCAGAGAAATACGGCTGAGAACTTTCCCAAACCAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR TCA 72 bp ACACAACCTGTGCAAGTGTGGAGATGCAGAGACCCCTaGATAAGAACAGGCAAACATTCCTTATTCCCAGCT +
Preference number: 3 (lower is better)
Translates to: TQPVQVWRCRDP*IRTGKHSLFPA
Trigger: AGCTGGGAATAAGGAATGTTTGCCTGTTCTTATTCAGGGGTCTCTGCATCTCCACACTTGCACAGGTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 72 bp ATTTGGAGGTGGGTTTCTCACAGTTTCTACACTGTCTaGCGGGCTCTGGAAATACTACCAACTGCAACTTCT +
Preference number: 3 (lower is better)
Translates to: IWRWVSHSFYTV*RALEILPTATS
Trigger: AGAAGTTGCAGTTGGTAGTATTTCCAGAGCCCGGCAGACAGTGTAGAAACTGTGAGAAACCCACCTCCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 72 bp TTTGGGAAAGTTCTCAGCCGTATTTCTCTGAATACTTaGCTCCACCCCATATTCTCTTTCCCCTCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: FGKVLSRISLNT*LHPIFSFPSFW
Trigger: CCAGAAGGAGGGGAAAGAGAATATGGGGTGGAGGCAAGTATTCAGAGAAATACGGCTGAGAACTTTCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 72 bp GAGATTGGTGAAGGAAGTGTCTGCCTCCATTTGTGCTaGTACAAGAGAATACCTGAGGCTGACTCATTTACA +
Preference number: 3 (lower is better)
Translates to: EIGEGSVCLHLC*YKRIPEADSFT
Trigger: TGTAAATGAGTCAGCCTCAGGTATTCTCTTGTAGCAGCACAAATGGAGGCAGACACTTCCTTCACCAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR GCA 72 bp TCATCCCATCTCATATTTTCCAGCTCTGTCTTTCTGTaGTGCACTTTGGGTCATTTCTTCAAACAGTTCCCG +
Preference number: 3 (lower is better)
Translates to: SSHLIFSSSVFL*CTLGHFFKQFP
Trigger: CGGGAACTGTTTGAAGAAATGACCCAAAGTGCAGCACAGAAAGACAGAGCTGGAAAATATGAGATGGGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CCA 72 bp ACCTCTTACAGGCCCCATCTCTTAACACTGTTAGAATaGCAATTCAATTTCAACATGAAGTTAGCACAGTGC +
Preference number: 3 (lower is better)
Translates to: TSYRPHLLTLLE*QFNFNMKLAQC
Trigger: GCACTGTGCTAACTTCATGTTGAAATTGAATTGCCATTCTAACAGTGTTAAGAGATGGGGCCTGTAAGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR-3UTR CAA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCGACAGAGGGGCTCTTTaGTTGACTGACACTTTCCTT +
Preference number: 3 (lower is better)
Translates to: VPENFSLRESDIKQNVLIDRGAL*LTDTFL
Trigger: AAGGAAAGTGTCAGTCAACAAAAGAGCCCCTCTGTC...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR TCA 72 bp AAAAAGGACACAGAAGAACACGAAATGTGTTTGATCTaGACCAAGTATTTTGAGATCCTGACACCTGCAGAG +
Preference number: 3 (lower is better)
Translates to: KKDTEEHEMCLI*TKYFEILTPAE
Trigger: CTCTGCAGGTGTCAGGATCTCAAAATACTTGGTTCAGATCAAACACATTTCGTGTTCTTCTGTGTCCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp CAGACAACCCTGTGTGGAGCCACGATTGGGACCCGGCGCCATCTGGAGCCCAGCGACTCGGCACCCACGTaGCCAGCCTGGGCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: QTTLCGATIGTRRHLEPSDSAPT*PAWASE
Trigger: CTCAGAGGCCCAGGCTGGGCACGTGGGTGCCGAGTC...GCTGGGCTCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACAGGGTTGTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CAA 72 bp CCTGCAGCCGACAGCTCACAGCCATGGGGCTGTCCTTaGCAGACTCGGCACCCACGTGCCCAGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PAADSSQPWGCP*QTRHPRAQPGP
Trigger: AGGCCCAGGCTGGGCACGTGGGTGCCGAGTCTGCAAAGGACAGCCCCATGGCTGTGAGCTGTCGGCTGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp CAGACAACCCTGTGTGGAGCCACGATTGGGACCCGGCGCCATCTGGAGCCCAGCCCAGCACTCACACGGTaGGCTCCTCTGGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: QTTLCGATIGTRRHLEPSPALTR*APLGPQ
Trigger: CTGTGGCCCCAGAGGAGCCCACCGTGTGAGTGCTGG...GCTGGGCTCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACAGGGTTGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp CAGACAACCCTGTGTGGAGCCACGATTGGGACCCGGCGCCATCTGGAGCCCAGCCCAGCCTGCAGACCCTaGACACCACCCCGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: QTTLCGATIGTRRHLEPSPACRP*TPPRFQ
Trigger: CTGGAAGCGGGGTGGTGTCCAGGGTCTGCAGGCTGG...GCTGGGCTCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACAGGGTTGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp CAGACAACCCTGTGTGGAGCCACGATTGGGACCCGGCGCCATCTGGAGCCCAGCTCCCTGCCCCAGGGTTaGCACGTGGAGCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: QTTLCGATIGTRRHLEPSSLPQG*HVEHCP
Trigger: AGGGCAGTGCTCCACGTGCCAACCCTGGGGCAGGGA...GCTGGGCTCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACAGGGTTGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp CCAGGCAACTTCAGGCAGATGACAGAGCCGGGACACTTTGAGCTCGAGGCACAGGCACGCGCAGCAGGGTaGGCCCGTCCAGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: PGNFRQMTEPGHFELEAQARAAG*ARPAGS
Trigger: GCTTCCGGCTGGACGGGCGCACCCTGCTGCGCGTGC...CTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GGCCACCTAGCTGTTTCCTTGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCTCGCCCATGTGGTGGGTaGGGGCCGTCAGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GHLAVSLPIGELTAAGEARPCGG*GPSAPG
Trigger: GCCAGGAGCTGACGGCCCGCACCCACCACATGGGCG...AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGAGCCCGAGCCCCAGCCTaGAGACCCTGGACACCACCC +
Preference number: 4 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGARAPA*RPWTPP
Trigger: GGGTGGTGTCCAGGGTCTGCAGGCTGGGGCTCGGGC...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACGGCCGCTCCGGCCGTTaGGTCGCCACCAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: ELPNRQCGLRKWKADVGDGRSGR*VATRTA
Trigger: TGCAGTCCTGGTGGCGACCCAACGGCCGGAGCGGCC...GTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CAA 72 bp TCCCGTCCTCCCAGACAACCCTGTGTGGAGCCACGATaGGGACCCGGCGCCATCTGGAGCCCAGCACTCACA +
Preference number: 4 (lower is better)
Translates to: SRPPRQPCVEPR*GPGAIWSPALT
Trigger: TGTGAGTGCTGGGCTCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACAGGGTTGTCTGGGAGGACGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACAGCGCGAGGTGCTTCTaGAGCGCGCCCTGCACCGAG +
Preference number: 4 (lower is better)
Translates to: ELPNRQCGLRKWKADVGDSARCF*SAPCTE
Trigger: CTCGGTGCAGGGCGCGCTGCAGAAGCACCTCGCGCT...GTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACGATGGCGGCAGCCCCTaGCCTCTCCTGCAGCGATGC +
Preference number: 4 (lower is better)
Translates to: ELPNRQCGLRKWKADVGDDGGSP*PLLQRC
Trigger: GCATCGCTGCAGGAGAGGGCAGGGGCTGCCGCCATC...GTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACGCTCTCCCAGGCTCCTaGCTCTCCTCTCGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: ELPNRQCGLRKWKADVGDALPGS*LSSRAA
Trigger: CGCAGCCCGAGAGGAGAGGCAGGAGCCTGGGAGAGC...GTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GGCCACCTAGCTGTTTCCTTGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCTGGACTGCAGGAGCTGTaGGCCAGGCGGCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: GHLAVSLPIGELTAAGEAGLQEL*ARRHLG
Trigger: CCCAAGGTGCCGCCTGGCCCACAGCTCCTGCAGTCC...AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CAA 72 bp CAGGACCGCAGGGGTCAGGGCCACCTAGCTGTTTCCTaGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QDRRGQGHLAVS*PIGELTAAGEA
Trigger: AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCCCTGACCCCTGCGGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGAAGAGGCGCTTGCGGATaGCGCCCATGTGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGRGACG*RPCGGC
Trigger: GCACCCACCACATGGGCGTCATCCGCAAGCGCCTCT...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GGCCACCTAGCTGTTTCCTTGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCTGCTCCTGGAGGGCTCTaGGGAGGAACAGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GHLAVSLPIGELTAAGEAAPGGL*GGTEVG
Trigger: CCCCACCTCTGTTCCTCCTCAGAGCCCTCCAGGAGC...AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GGCCACCTAGCTGTTTCCTTGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCTCTGTCCAAGAGGGGCTaGAGGCCACCGGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GHLAVSLPIGELTAAGEALSKRG*RPPALR
Trigger: CCTGAGAGCCGGTGGCCTTCAGCCCCTCTTGGACAG...AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GGCCACCTAGCTGTTTCCTTGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCTCTAGCTTGGGCTCCCTaGCCCAGGGTTGGCACGTGG +
Preference number: 4 (lower is better)
Translates to: GHLAVSLPIGELTAAGEALAWAP*PRVGTW
Trigger: CCACGTGCCAACCCTGGGGCAGGGAGCCCAAGCTAG...AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GGCCACCTAGCTGTTTCCTTGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCTATGACGCCCATGTGGTaGGTGCGGGCCGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GHLAVSLPIGELTAAGEAMTPMW*VRAVSS
Trigger: GGAGCTGACGGCCCGCACCCACCACATGGGCGTCAT...AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGAGCGGCTAAGGCCACCTaGGCACCCTCAGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGAAKAT*APSEAL
Trigger: CAGAGCCTCTGAGGGTGCCCAGGTGGCCTTAGCCGC...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCGGCTCCCTGCCTGCTTaGCCCTCTGTGGCCACCCTA +
Preference number: 4 (lower is better)
Translates to: SAMQPHQSRAHLYLARALGSLPA*PSVATL
Trigger: TAGGGTGGCCACAGAGGGCCAAGCAGGCAGGGAGCC...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGATGCCCTGGCCAGCCCTaGACTTGCCCACAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGCPGQP*TCPQSV
Trigger: GACAGACTGTGGGCAAGTTCAGGGCTGGCCAGGGCA...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCGGCGCTTCCAGACCATaGCCTGTCCAAGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SAMQPHQSRAHLYLARALGASRP*PVQEGL
Trigger: CAGCCCCTCTTGGACAGGTCATGGTCTGGAAGCGCC...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GGCCACCTAGCTGTTTCCTTGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCTTTCTGCAGCGCGCCCTaGACCGAGCTGTCACACTCC +
Preference number: 4 (lower is better)
Translates to: GHLAVSLPIGELTAAGEAFCSAP*TELSHS
Trigger: GGAGTGTGACAGCTCGGTGCAGGGCGCGCTGCAGAA...AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACCTGTATAGCGCGAGGTaGTTCTGCAGCGCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ELPNRQCGLRKWKADVGDLYSAR*FCSAPC
Trigger: GCAGGGCGCGCTGCAGAAGCACCTCGCGCTATACAG...GTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCAGCCCCTGCCCTCTCCTaGAGCGATGCAGCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSAPALS*SDAAPQ
Trigger: CTGCGGGGCTGCATCGCTGCAGGAGAGGGCAGGGGC...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp CCAGGCAACTTCAGGCAGATGACAGAGCCGGGACACTTTGAGCTCGAGGCACAGGGCAGAACTCTGCCCTaGTGGCTCCTGAGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: PGNFRQMTEPGHFELEAQGRTLP*WLLSPA
Trigger: CGCAGGGCTCAGGAGCCAGCAGGGCAGAGTTCTGCC...CTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCCCTCCCCTGCTGGCCTaGAGCCATGCCAAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SAMQPHQSRAHLYLARALPPLLA*SHAKCF
Trigger: GAAGCACTTGGCATGGCTGCAGGCCAGCAGGGGAGG...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCAGGGCCCAGCTGGGTGTaGGCGCCTCCGCAATGCAGC +
Preference number: 4 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSGPSWV*APPQCS
Trigger: GCTGCATTGCGGAGGCGCGCACACCCAGCTGGGCCC...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCGGAGCCCGTACAAGATaGCGTCATAGAGCGTCCGGC +
Preference number: 4 (lower is better)
Translates to: SAMQPHQSRAHLYLARALGARTR*RHRASG
Trigger: GCCGGACGCTCTATGACGTCATCTTGTACGGGCTCC...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGTTCGCGGGTCGCGGATaGGGATGGCGGCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLFAGRG*GWRQPL
Trigger: CAGGGGCTGCCGCCATCCTCATCCGCGACCCGCGAA...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCAGGCCTTCATCCTGGGTaGGGAGCCGCCACCCCATGC +
Preference number: 4 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSGLHPG*GAATPC
Trigger: GCATGGGGTGGCGGCTCCTCACCCAGGATGAAGGCC...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GGCCACCTAGCTGTTTCCTTGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCTGGAGGCTGTGCCCCGTaGCTGACAGCAAGTCACTCT +
Preference number: 4 (lower is better)
Translates to: GHLAVSLPIGELTAAGEAGGCAP*LTASHS
Trigger: AGAGTGACTTGCTGTCAGTCACGGGGCACAGCCTCC...AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCACCGCCACCCCATGCGTaGTGTTCGCGGGTCGCGGAT +
Preference number: 4 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSPPPHA*CSRVAD
Trigger: ATCCGCGACCCGCGAACAGCACGCATGGGGTGGCGG...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACGTCTGGAATCCATCCTaGGCTGGGCGCTTCCAGACC +
Preference number: 4 (lower is better)
Translates to: ELPNRQCGLRKWKADVGDVWNPS*AGRFQT
Trigger: GGTCTGGAAGCGCCCAGCGCAGGATGGATTCCAGAC...GTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCCCCTCATTCCAGGGGTaGATGCCCCTCATGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SAMQPHQSRAHLYLARALPSFQG*MPLMQE
Trigger: CTCCTGCATGAGGGGCATGCACCCCTGGAATGAGGG...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACTGGCACGTGGAGCACTaGCCTGGGTCTCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDWHVEH*PGSPWP
Trigger: GGGCCATGGAGACCCAGGGCAGTGCTCCACGTGCCA...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCACGGATGACGCCCATGTaGTGGGTGCGGGCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSRMTPM*WVRAVS
Trigger: GCTGACGGCCCGCACCCACCACATGGGCGTCATCCG...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GGCCACCTAGCTGTTTCCTTGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCTGGGGACTTTCCCAGATaGAAACCAGGGCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: GHLAVSLPIGELTAAGEAGDFPR*KPGLPP
Trigger: GGGTGGGAGCCCTGGTTTCCATCTGGGAAAGTCCCC...AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACCAGACAACCCTGTGTaGAGCCACGATTGGGACCCG +
Preference number: 4 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGPDNPV*SHDWDP
Trigger: CGGGTCCCAATCGTGGCTCCACACAGGGTTGTCTGG...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCGCAGGGATGCTGGTCTaGAATCCATCCTGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: SAMQPHQSRAHLYLARALAGMLV*NPSCAG
Trigger: CCCAGCGCAGGATGGATTCCAGACCAGCATCCCTGC...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGAAGTTTTCCTGCCCTGTaGCCCAGAGCTCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGSFPAL*PRAPPQ
Trigger: CTGGGGTGGAGCTCTGGGCCACAGGGCAGGAAAACT...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGGGTGCGGCTCCACCGTaGCCTTCCGCCGGATCCTGT +
Preference number: 4 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLGAAPP*PSAGSC
Trigger: ACAGGATCCGGCGGAAGGTCACGGTGGAGCCGCACC...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp CCAGGCAACTTCAGGCAGATGACAGAGCCGGGACACTTTGAGCTCGAGGCACAGCGCATAGCCCCACCCTaGGACATGCTGGAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: PGNFRQMTEPGHFELEAQRIAPP*DMLEAS
Trigger: GCTTGCTTCCAGCATGTCTCAGGGTGGGGCTATGCG...CTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCGCTGTGCCCCGTGACTaGCAGCAAGTCACTCTCACT +
Preference number: 4 (lower is better)
Translates to: SAMQPHQSRAHLYLARALAVPRD*QQVTLT
Trigger: AGTGAGAGTGACTTGCTGTCAGTCACGGGGCACAGC...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp CAGACAACCCTGTGTGGAGCCACGATTGGGACCCGGCGCCATCTGGAGCCCAGCTCAGCCGTATTTCTCTaGATACTTGCCTCCACCCCA +
Preference number: 4 (lower is better)
Translates to: QTTLCGATIGTRRHLEPSSAVFL*ILASTP
Trigger: TGGGGTGGAGGCAAGTATTCAGAGAAATACGGCTGA...GCTGGGCTCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACAGGGTTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp CAGACAACCCTGTGTGGAGCCACGATTGGGACCCGGCGCCATCTGGAGCCCAGCTCCAAGATGGTGCTTTaGACACTGGAGGGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: QTTLCGATIGTRRHLEPSSKMVL*TLEGKR
Trigger: TCTCTTGCCCTCCAGTGTTCAAAGCACCATCTTGGA...GCTGGGCTCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACAGGGTTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GGCCACCTAGCTGTTTCCTTGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCTGTGAACAGGAGGCTGTaGCCCGTGACTGACAGCAAG +
Preference number: 4 (lower is better)
Translates to: GHLAVSLPIGELTAAGEAVNRRL*PVTDSK
Trigger: CTTGCTGTCAGTCACGGGGCACAGCCTCCTGTTCAC...AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCGGTGCATGCCCCTCATaGAGGAGACACCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SAMQPHQSRAHLYLARALGACPS*RRHQLL
Trigger: CAAGAGCTGGTGTCTCCTGCATGAGGGGCATGCACC...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACATTCCAGGGGTGCATaGCCCTCATGCAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGHSRGA*PSCRRH
Trigger: GTGTCTCCTGCATGAGGGGCATGCACCCCTGGAATG...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCACACGGTGGGCTCCTCTaGGGCCACAGGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSHGGLL*GHRKSR
Trigger: CCTGGACTTCCTGTGGCCCCAGAGGAGCCCACCGTG...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACGTGTGGAGCCACGATTaGGACCCGGCGCCATCTGGA +
Preference number: 4 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDVWSHD*DPAPSG
Trigger: TCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACAC...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GGCCACCTAGCTGTTTCCTTGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCTAGCCTCCCGAATAGGTaGGACCACAGGTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: GHLAVSLPIGELTAAGEASLPNR*DHRCGP
Trigger: TGGTCCACACCTGTGGTCCCACCTATTCGGGAGGCT...AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp CCAGGCAACTTCAGGCAGATGACAGAGCCGGGACACTTTGAGCTCGAGGCACAGATTCCACCTTCTGGCTaGGAGACTGCCCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PGNFRQMTEPGHFELEAQIPPSG*ETAPPR
Trigger: CCTGGGAGGGGCAGTCTCCCAGCCAGAAGGTGGAAT...CTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGATCCGCCCTTGGAGAGTaGAGCCCTCACAGCCTAATC +
Preference number: 4 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGSALGE*SPHSLI
Trigger: GATTAGGCTGTGAGGGCTCCACTCTCCAAGGGCGGA...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp CAGACAACCCTGTGTGGAGCCACGATTGGGACCCGGCGCCATCTGGAGCCCAGCAGGAACTGGCCGACTTaGGAATTCCACCTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: QTTLCGATIGTRRHLEPSRNWPT*EFHLQD
Trigger: ATCTTGGAGGTGGAATTCCCAAGTCGGCCAGTTCCT...GCTGGGCTCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACAGGGTTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp CCAGGCAACTTCAGGCAGATGACAGAGCCGGGACACTTTGAGCTCGAGGCACAGAGCTCACGCCGTTCATaGAGGCCAGGTTGGACTCCA +
Preference number: 4 (lower is better)
Translates to: PGNFRQMTEPGHFELEAQSSRRS*RPGWTP
Trigger: TGGAGTCCAACCTGGCCTTCATGAACGGCGTGAGCT...CTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp CCAGGCAACTTCAGGCAGATGACAGAGCCGGGACACTTTGAGCTCGAGGCACAGTCCCTCTCCCCCAAATaGAACCAGAGCTCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: PGNFRQMTEPGHFELEAQSLSPK*NQSSQG
Trigger: CCCTTGGGAGCTCTGGTTTCATTTGGGGGAGAGGGA...CTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACTGAGCCCAGAAGGTTaGGGCTGTAGTGAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGLSPEG*GCSELC
Trigger: ACACAGCTCACTACAGCCTCAACCTTCTGGGCTCAG...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGAGGCAGGAGAATCATCTaGGCCCAGAAGGTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGGRRII*AQKVEA
Trigger: AGCCTCAACCTTCTGGGCTCAGATGATTCTCCTGCC...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCAGGCCAGCCGCACATCTaGCCTGCCTTGCCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSGQPHI*PALPFL
Trigger: CAGGAAAGGCAAGGCAGGGCAGATGTGCGGCTGGCC...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGTTCTGGCTGGGAGACTaGCCCTCCCAGGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLFWLGD*PSQASQ
Trigger: CTGGCTGGCCTGGGAGGGGCAGTCTCCCAGCCAGAA...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp CCAGGCAACTTCAGGCAGATGACAGAGCCGGGACACTTTGAGCTCGAGGCACAGCATATTGGGTGGAGATaGCCAGGCTGGCCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PGNFRQMTEPGHFELEAQHIGWR*PGWPEE
Trigger: CTCCTCTGGCCAGCCTGGGCATCTCCACCCAATATG...CTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACGAAGCGGCAGTTCATTaGTCAGCAGCCCTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ELPNRQCGLRKWKADVGDEAAVH*SAALAG
Trigger: TCCTGCTAGGGCTGCTGACCAATGAACTGCCGCTTC...GTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp TTCCTCCCGTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTAGGCCTCAGGGGAACTaGGCAACACCGCCCACACTC +
Preference number: 4 (lower is better)
Translates to: FLPSIRSTPSSWVITNYTRPQGN*ATPPTL
Trigger: GAGTGTGGGCGGTGTTGCCCAGTTCCCCTGAGGCCT...AGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGACGGGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCCCCGGGCACCAGGGCTaGGCCTTCATCCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSPGHQG*AFILGE
Trigger: CTCACCCAGGATGAAGGCCCAGCCCTGGTGCCCGGG...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCAGGCGCAGCAGACAGATaGGACGGGAAGACCCTGGAC +
Preference number: 4 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSGAADR*DGKTLD
Trigger: GTCCAGGGTCTTCCCGTCCCATCTGTCTGCTGCGCC...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCGGACCCGGCGCCATCTaGAGCCCAGCACTCACACGG +
Preference number: 4 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSGPGAI*SPALTR
Trigger: CCGTGTGAGTGCTGGGCTCCAGATGGCGCCGGGTCC...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCCTGCCTTGCCTTTCCTaGGGAAGTGCCAGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: SAMQPHQSRAHLYLARALLPCLS*GSARKG
Trigger: ACCTTTCCTGGCACTTCCCCAGGAAAGGCAAGGCAG...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCACAGCTTGGAGCCCATaGAAATCACTCCAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SAMQPHQSRAHLYLARALTAWSP*KSLQLA
Trigger: GGCCAGCTGGAGTGATTTCCATGGGCTCCAAGCTGT...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGAGTGAGCCACTGCGCCTaGCCCCTCATTCTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGVSHCA*PLILER
Trigger: TCTTTCAAGAATGAGGGGCCAGGCGCAGTGGCTCAC...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACCGCCATCACTCATATTaGGTGGAGATGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ELPNRQCGLRKWKADVGDRHHSY*VEMPRL
Trigger: CAGCCTGGGCATCTCCACCCAATATGAGTGATGGCG...GTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGATGTGCAGAGGACCCTTaGTCTTCTCTGACCACAGCA +
Preference number: 4 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGCAEDP*SSLTTA
Trigger: TGCTGTGGTCAGAGAAGATCAAGGGTCCTCTGCACA...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp CAGACAACCCTGTGTGGAGCCACGATTGGGACCCGGCGCCATCTGGAGCCCAGCCTGAACCAAGTATTTTaGGATCCTGACACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: QTTLCGATIGTRRHLEPSLNQVF*DPDTCR
Trigger: TCTGCAGGTGTCAGGATCTCAAAATACTTGGTTCAG...GCTGGGCTCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACAGGGTTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GGCCACCTAGCTGTTTCCTTGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCTGGTGGGAAGATCACCTaGGCCCAGAAATTCAAGACC +
Preference number: 4 (lower is better)
Translates to: GHLAVSLPIGELTAAGEAGGKIT*AQKFKT
Trigger: GGTCTTGAATTTCTGGGCTCAGGTGATCTTCCCACC...AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCACTCGCAGCTCCGGGTaGGGCTCCACCGTGACCTTC +
Preference number: 4 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSTRSSG*GSTVTF
Trigger: GAAGGTCACGGTGGAGCCGCACCCGGAGCTGCGAGT...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCAACAAGGCCCGGAAGCTaGCAGTGCTGGCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSTRPGS*QCWPET
Trigger: TGTCTCTGGCCAGCACTGGCAGCTTCCGGGCCTTGT...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp TTCCTCCCGTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTCATGGGGCTGTCCTTTaGAGACTCGGCACCCACGTG +
Preference number: 4 (lower is better)
Translates to: FLPSIRSTPSSWVITNYTHGAVL*RLGTHV
Trigger: CACGTGGGTGCCGAGTCTGCAAAGGACAGCCCCATG...AGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGACGGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp TTCCTCCCGTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTCGGGACAGGCTAGGATaGTCCCAGATGCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: FLPSIRSTPSSWVITNYTRDRLG*SQMLQH
Trigger: GTGCTGCAGCATCTGGGAGCATCCTAGCCTGTCCCG...AGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGACGGGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCAAAAATTCCACCTTCTaGCTGGGAGACTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SAMQPHQSRAHLYLARALKNSTF*LGDCPS
Trigger: GGAGGGGCAGTCTCCCAGCCAGAAGGTGGAATTTTT...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCAGCAGGGGCTCCTGTTaGTTTGGGAAAGTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SAMQPHQSRAHLYLARALSRGSC*FGKVLS
Trigger: GCTGAGAACTTTCCCAAACCAACAGGAGCCCCTGCT...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp TTCCTCCCGTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGGCTGGCCAGAGGAGTaGGAGAGCTTCCAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: FLPSIRSTPSSWVITNYTGWPEE*ESFQVR
Trigger: TCTCACCTGGAAGCTCTCCCACTCCTCTGGCCAGCC...AGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGACGGGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACAGCTACCCAGGAGGCTaGGGCAGGAAAATCACTGGA +
Preference number: 4 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDSYPGG*GRKITG
Trigger: TCCAGTGATTTTCCTGCCTCAGCCTCCTGGGTAGCT...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp CCAGGCAACTTCAGGCAGATGACAGAGCCGGGACACTTTGAGCTCGAGGCACAGCCTTGTAACAGATGCTaGAGTCAGTGTCCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: PGNFRQMTEPGHFELEAQPCNRC*SQCPCP
Trigger: AGGGCACGGACACTGACTTCAGCATCTGTTACAAGG...CTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACGGCGAGGACGCAGTATaGCAAGAACCTGGCACACTT +
Preference number: 4 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDGEDAV*QEPGTL
Trigger: AAGTGTGCCAGGTTCTTGTCATACTGCGTCCTCGCC...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp CCAGGCAACTTCAGGCAGATGACAGAGCCGGGACACTTTGAGCTCGAGGCACAGAGTGAGCTGTGTTTATaGCACTCCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGNFRQMTEPGHFELEAQSELCL*HSTPAW
Trigger: CCAGGCTGGAGTGGAGTGGCATAAACACAGCTCACT...CTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACGGGAAACATGGGAGATaGGCACAGCCTTCCACAAGC +
Preference number: 4 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDGKHGR*AQPSTS
Trigger: GCTTGTGGAAGGCTGTGCCCATCTCCCATGTTTCCC...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCAGAGCTCACACTTCAGTaGGAAGGGGGAAGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSELTLQ*EGGSQW
Trigger: CCACTGGCTTCCCCCTTCCCACTGAAGTGTGAGCTC...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACGACAGCTCACAGCCATaGGGCTGTCCTTTGCAGACT +
Preference number: 4 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDDSSQP*GCPLQT
Trigger: AGTCTGCAAAGGACAGCCCCATGGCTGTGAGCTGTC...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACCACTCCTGGCTGAGCTaGAGAGAAAACTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDHSWLS*RENWLG
Trigger: TCCCAGCCAGTTTTCTCTCCAGCTCAGCCAGGAGTG...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GGCCACCTAGCTGTTTCCTTGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCTCTGTCTGCCGGGCTCTaGAAATACTACCAACTGCAA +
Preference number: 4 (lower is better)
Translates to: GHLAVSLPIGELTAAGEALSAGL*KYYQLQ
Trigger: TTGCAGTTGGTAGTATTTCCAGAGCCCGGCAGACAG...AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACAGCCTCCCGAGTAGCTaGGATTACAGGAATATGCCA +
Preference number: 4 (lower is better)
Translates to: ELPNRQCGLRKWKADVGDSLPSS*DYRNMP
Trigger: TGGCATATTCCTGTAATCCCAGCTACTCGGGAGGCT...GTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCAGGCAGCTCACAGGAGTaGGCCTCCCATGAGATTGGT +
Preference number: 4 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSGSSQE*ASHEIG
Trigger: ACCAATCTCATGGGAGGCCCACTCCTGTGAGCTGCC...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACCAAAGACGGGGACACTaGAGATGGTCAGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDQRRGH*RWSDAH
Trigger: GTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTG...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCACCCTTGATCTTCTCTaGCCACAGCAGGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSTLDLL*PQQGQP
Trigger: GGGCTGGCCCTGCTGTGGTCAGAGAAGATCAAGGGT...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GGCCACCTAGCTGTTTCCTTGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCTTGCAAACACAGGCTATaGCAAAACCCAGCACACACA +
Preference number: 4 (lower is better)
Translates to: GHLAVSLPIGELTAAGEACKHRL*QNPAHT
Trigger: TGTGTGTGCTGGGTTTTGGCATAGCCTGTGTTTGCA...AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCACAGGAAAAGCAGTGTaGAGTTTTGGAGCGGCTACA +
Preference number: 4 (lower is better)
Translates to: SAMQPHQSRAHLYLARALTGKAV*SFGAAT
Trigger: TGTAGCCGCTCCAAAACTGCACACTGCTTTTCCTGT...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACGAACATTGGTGTGTGTaGTTCTGTCTGCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ELPNRQCGLRKWKADVGDEHWCV*FCLPFC
Trigger: GCAGAAAGGCAGACAGAAGCACACACACCAATGTTC...GTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCACTGGAGATGGTCAGATaGCCACAGCCCAGACAGTCA +
Preference number: 4 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSLEMVR*PQPRQS
Trigger: TGACTGTCTGGGCTGTGGGCATCTGACCATCTCCAG...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGATCCCACAAATGCCGATaGGCACAAACTAAGCTAGCA +
Preference number: 4 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGSHKCR*AQTKLA
Trigger: TGCTAGCTTAGTTTGTGCGCATCGGCATTTGTGGGA...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCGAAGGGGGAAGCCAGTaGGTGAACAGGAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSEGGSQ*VNRRLC
Trigger: GCACAGCCTCCTGTTCACCCACTGGCTTCCCCCTTC...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp CCAGGCAACTTCAGGCAGATGACAGAGCCGGGACACTTTGAGCTCGAGGCACAGACCCCAAAACCGCCATaGCTGCAGATTTCTAGAGAG +
Preference number: 4 (lower is better)
Translates to: PGNFRQMTEPGHFELEAQTPKPP*LQISRE
Trigger: CTCTCTAGAAATCTGCAGCCATGGCGGTTTTGGGGT...CTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGATCTACACCCTCCTCCTaGGTGATCACAAACTACACT +
Preference number: 4 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGSTPSS*VITNYT
Trigger: AGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGA...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCAAGGTTGCAGGGATGCTaGTCTGGAATCCATCCTGCG +
Preference number: 4 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSRLQGC*SGIHPA
Trigger: CGCAGGATGGATTCCAGACCAGCATCCCTGCAACCT...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGAGGCCTGATTTGGAGGTaGGTTTCTCACAGTTTCTAC +
Preference number: 4 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGGLIWR*VSHSFY
Trigger: GTAGAAACTGTGAGAAACCCACCTCCAAATCAGGCC...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GGCCACCTAGCTGTTTCCTTGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCTGCTGGGCCTTGTTTATaGTACTGTGTGTGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: GHLAVSLPIGELTAAGEAAGPCL*YCVCVL
Trigger: CAACACACACACACAGTACCATAAACAAGGCCCAGC...AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp CAGACAACCCTGTGTGGAGCCACGATTGGGACCCGGCGCCATCTGGAGCCCAGCTTCTGTGCTGCACTTTaGGTCATTTCTTCAAACAGT +
Preference number: 4 (lower is better)
Translates to: QTTLCGATIGTRRHLEPSFCAAL*VISSNS
Trigger: ACTGTTTGAAGAAATGACCCAAAGTGCAGCACAGAA...GCTGGGCTCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACAGGGTTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGCACCCTCCTCCTGGGTaGTCACAAACTACACTGCAG +
Preference number: 4 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLHPPPG*SQTTLQ
Trigger: CTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTG...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGGCAACTTCAGGCAGATaGCAGAGCCGGGACACTTTG +
Preference number: 4 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLATSGR*QSRDTL
Trigger: CAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGC...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACAGATGCAGAGACCCCTaGATAAGAACAGGCAAACAT +
Preference number: 4 (lower is better)
Translates to: ELPNRQCGLRKWKADVGDRCRDP*IRTGKH
Trigger: ATGTTTGCCTGTTCTTATTCAGGGGTCTCTGCATCT...GTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGCACTCTGGAGTGGAGTaGTTCCTTCCTGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLHSGVE*FLPGSP
Trigger: AGGTGAGCCAGGAAGGAAGCACTCCACTCCAGAGTG...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GGCCACCTAGCTGTTTCCTTGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCTAGTTTCTACACTGTCTaGCGGGCTCTGGAAATACTA +
Preference number: 4 (lower is better)
Translates to: GHLAVSLPIGELTAAGEASFYTV*RALEIL
Trigger: TAGTATTTCCAGAGCCCGGCAGACAGTGTAGAAACT...AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp TTCCTCCCGTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGTGTGTGCTTCTGTCTaGCTTTCTGCTGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: FLPSIRSTPSSWVITNYTVCASV*LSAGPC
Trigger: ACAAGGCCCAGCAGAAAGGCAGACAGAAGCACACAC...AGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGACGGGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GGCCACCTAGCTGTTTCCTTGCCCATAGGAGAGCTGACTGCAGCGGGTGAGGCTTGCCTCCATTTGTGCTaGTACAAGAGAATACCTGAG +
Preference number: 4 (lower is better)
Translates to: GHLAVSLPIGELTAAGEACLHLC*YKRIPE
Trigger: CTCAGGTATTCTCTTGTAGCAGCACAAATGGAGGCA...AGCCTCACCCGCTGCAGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGCACCTCACTCTGGAGTaGAGTGCTTCCTTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLHLTLE*SASFLA
Trigger: AGCCAGGAAGGAAGCACTCCACTCCAGAGTGAGGTG...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCTGTGGGCTCAGAAAGTaGAAGGCGGATGTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSCGLRK*KADVGD
Trigger: GTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACA...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGATTTAACTATGCTGCTTaGGAGCTGCTGGTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGFNYAA*ELLVPE
Trigger: TTCAGGAACCAGCAGCTCCCAAGCAGCATAGTTAAA...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCAGCTCATGCCTGTAATTaGGACCATCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSAHACN*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATTACAGGCATGAGC...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCACTGGCCCCTCATTCTTaGAAGACGGATTTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSLAPHS*KTDFLG
Trigger: ACCCAGAAAATCCGTCTTTCAAGAATGAGGGGCCAG...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACAAAAGGTTGCAGGGATaGTGGTCTGGAATCCATCCT +
Preference number: 4 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDKRLQG*WSGIHP
Trigger: AGGATGGATTCCAGACCAGCATCCCTGCAACCTTTT...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp CCAGGCAACTTCAGGCAGATGACAGAGCCGGGACACTTTGAGCTCGAGGCACAGAGCTCTGTCTTTCTGTaGTGCACTTTGGGTCATTTC +
Preference number: 4 (lower is better)
Translates to: PGNFRQMTEPGHFELEAQSSVFL*CTLGHF
Trigger: GAAATGACCCAAAGTGCAGCACAGAAAGACAGAGCT...CTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGCTTGGCCTCCCAAAGTaGTGGGAATACAGACGTGAG +
Preference number: 4 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLLGLPK*WEYRRE
Trigger: CTCACGTCTGTATTCCCAGCACTTTGGGAGGCCAAG...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCACCTCCGAGTGTTCCTaGAGCCCGTACAAGATGACG +
Preference number: 4 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSTSECS*SPYKMT
Trigger: CGTCATCTTGTACGGGCTCCAGGAACACTCGGAGGT...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGTCAAGGAGGCCCCACTaGAAAAGCCAGGCAACTTCA +
Preference number: 4 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLSRRPH*KSQATS
Trigger: TGAAGTTGCCTGGCTTTTCCAGTGGGGCCTCCTTGA...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCGCCCAACAGGCAATGTaGGCTCAGAAAGTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSAQQAM*AQKVEG
Trigger: GCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGC...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp CCAGGCAACTTCAGGCAGATGACAGAGCCGGGACACTTTGAGCTCGAGGCACAGGGGAGCTTGTCTCCTTaGGGATTAGAAGATGATGAT +
Preference number: 4 (lower is better)
Translates to: PGNFRQMTEPGHFELEAQGSLSP*GLEDDD
Trigger: ATCATCATCTTCTAATCCCCAAGGAGACAAGCTCCC...CTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACCTAAGATCAGAACATTaGTGTGTGTGCTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: ELPNRQCGLRKWKADVGDLRSEH*CVCFCL
Trigger: CAGACAGAAGCACACACACCAATGTTCTGATCTTAG...GTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCCTGCTTGGGAGCTGCTaGTTCCTGAACCTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSLLGSC*FLNLRS
Trigger: GCTCCTTAGGTTCAGGAACCAGCAGCTCCCAAGCAG...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGATCACTCATATTGGGTaGAGATGCCCAGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLITHIG*RCPGWP
Trigger: TGGCCAGCCTGGGCATCTCCACCCAATATGAGTGAT...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGATGAAGTTAGCACAGTaGCTCATGCCCCAATCCCAG +
Preference number: 4 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLMKLAQ*LMPQSQ
Trigger: CTGGGATTGGGGCATGAGGCACTGTGCTAACTTCAT...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACCATTTCTCCCACAAATaGCGATGCGCACAAACTAAG +
Preference number: 4 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDHFSHK*RCAQTK
Trigger: CTTAGTTTGTGCGCATCGGCATTTGTGGGAGAAATG...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCAGCAGTGTGCAGTTTTaGAGCGGCTACACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSSSVQF*SGYTSS
Trigger: AGAGCTGGTGTAGCCGCTCCAAAACTGCACACTGCT...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGACCACTCCTACAGCTTaGAGCCCATGGAAATCACTC +
Preference number: 4 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLTTPTA*SPWKSL
Trigger: GAGTGATTTCCATGGGCTCCAAGCTGTAGGAGTGGT...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACTTCTCCTTGAAGGACTaGCTTTTAAATTCCATGGTC +
Preference number: 4 (lower is better)
Translates to: ELPNRQCGLRKWKADVGDFSLKD*LLNSMV
Trigger: GACCATGGAATTTAAAAGCCAGTCCTTCAAGGAGAA...GTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCGCTGACTGCAGCGGGTaGGGCTGGACGGCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: VPENFSLRESDIKQNVLIADCSG*GWTAPL
Trigger: GAGAGGGGCCGTCCAGCCTCACCCGCTGCAGTCAGC...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp CAGGGAAATCAAAGACGGGGACACTGGAGATGGTCAGATGCCCACAGCCCAGACTGCTATTATTGTCCCTaGGAACTTCTCACTGAGAGA +
Preference number: 4 (lower is better)
Translates to: QGNQRRGHWRWSDAHSPDCYYCP*ELLTER
Trigger: TCTCTCAGTGAGAAGTTCTCAGGGACAATAATAGCA...GTCTGGGCTGTGGGCATCTGACCATCTCCAGTGTCCCCGTCTTTGATTTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCGGAGCCGCCACCCCATaGGTGCTGTTCGCGGGTCGC +
Preference number: 4 (lower is better)
Translates to: VPENFSLRESDIKQNVLIGAATP*VLFAGR
Trigger: GCGACCCGCGAACAGCACGCATGGGGTGGCGGCTCC...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGGCAAGTCACTCTCACTaGAAACACAGGCTATGCCAA +
Preference number: 4 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLASHSH*KHRLCQ
Trigger: TTGGCATAGCCTGTGTTTGCAGTGAGAGTGACTTGC...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCCAAAACCGCCATGGCTaGAGATTTCTAGAGAGCACC +
Preference number: 4 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSQNRHG*RFLEST
Trigger: GGTGCTCTCTAGAAATCTGCAGCCATGGCGGTTTTG...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp TTCCTCCCGTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTTTCTGTCTGCCTTTCTaGTGGGCCTTGTTTATGGTA +
Preference number: 4 (lower is better)
Translates to: FLPSIRSTPSSWVITNYTFCLPF*WALFMV
Trigger: TACCATAAACAAGGCCCAGCAGAAAGGCAGACAGAA...AGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGACGGGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGAGTATTTTGAGATCCTaGCACCTGCAGAGACCTGAA +
Preference number: 4 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLSILRS*HLQRPE
Trigger: TTCAGGTCTCTGCAGGTGTCAGGATCTCAAAATACT...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGGATCACAAACTACACTaGAGCTCAGAGCTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLDHKLH*SSELPL
Trigger: TAAAGGCAGCTCTGAGCTGCAGTGTAGTTTGTGATC...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp TTCCTCCCGTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTTCTGTCTTTCTGTGCTaGACTTTGGGTCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: FLPSIRSTPSSWVITNYTSVFLC*TLGHFF
Trigger: GAAGAAATGACCCAAAGTGCAGCACAGAAAGACAGA...AGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGACGGGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGGGAGAGAAAACTGGCTaGGAAGCTGATCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLGEKTG*EADQMS
Trigger: AGACATTTGATCAGCTTCCCAGCCAGTTTTCTCTCC...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CAA 72 bp CCTGAGGCTGACTCATTTACAAGGAACAGAGGTTTATaGGCTCACGGTTCTGGAGACCGGACAGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: PEADSFTRNRGL*AHGSGDRTVQD
Trigger: ATCTTGGACTGTCCGGTCTCCAGAACCGTGAGCCAATAAACCTCTGTTCCTTGTAAATGAGTCAGCCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCGGGAGAGCTTCCAGGTaGGACAGGGACGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VPENFSLRESDIKQNVLIGRASR*DRDGSR
Trigger: CCTGGAGCCGTCCCTGTCTCACCTGGAAGCTCTCCC...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCCCCGGAAGCTGCCAGTaGTGGCCAGAGACACCGTCC +
Preference number: 4 (lower is better)
Translates to: VPENFSLRESDIKQNVLIPGSCQ*WPETPS
Trigger: GGACGGTGTCTCTGGCCAGCACTGGCAGCTTCCGGG...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGCACAACTGCACCTTATaGCTTGAATTCACACACACA +
Preference number: 4 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLHNCTL*LEFTHT
Trigger: TGTGTGTGTGAATTCAAGGCATAAGGTGCAGTTGTG...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp TTCCTCCCGTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGAAAGACGGATTTTCTaGGTACACAATTCTAGGCTA +
Preference number: 4 (lower is better)
Translates to: FLPSIRSTPSSWVITNYTERRIF*VHNSRL
Trigger: TAGCCTAGAATTGTGTACCCAGAAAATCCGTCTTTC...AGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGACGGGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCACTGTGTGTGTGTGTTaGCAATTTCTTTCCTGTACC +
Preference number: 4 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSTVCVC*QFLSCT
Trigger: GGTACAGGAAAGAAATTGTCAACACACACACACAGT...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGATTTCTCTGAATACTTaGCTCCACCCCATATTCTCT +
Preference number: 4 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLISLNT*LHPIFS
Trigger: AGAGAATATGGGGTGGAGGCAAGTATTCAGAGAAAT...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCCTGGCCAGAGCACTCTaGCAGCCAGGGACCACTCCT +
Preference number: 4 (lower is better)
Translates to: VPENFSLRESDIKQNVLILARAL*QPGTTP
Trigger: AGGAGTGGTCCCTGGCTGCCAGAGTGCTCTGGCCAG...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCCGTGGAGCACTGCCCTaGGTCTCCATGGCCCATAGC +
Preference number: 4 (lower is better)
Translates to: VPENFSLRESDIKQNVLIRGALP*VSMAHS
Trigger: GCTATGGGCCATGGAGACCCAGGGCAGTGCTCCACG...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCAGAGCCGGGACACTTTaGGCTCGAGGCACAGACCCT +
Preference number: 4 (lower is better)
Translates to: VPENFSLRESDIKQNVLIRAGTL*ARGTDP
Trigger: AGGGTCTGTGCCTCGAGCTCAAAGTGTCCCGGCTCT...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCTCATGCCAGGCAGAGTaGGGTACAAGGCCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: VPENFSLRESDIKQNVLISCQAE*GTRPGS
Trigger: GCTTCCGGGCCTTGTACCCCACTCTGCCTGGCATGA...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCGGCGGCACCTCACTCTaGAGTGGAGTGCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: VPENFSLRESDIKQNVLIGGTSL*SGVLPS
Trigger: GGAAGGAAGCACTCCACTCCAGAGTGAGGTGCCGCC...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CAA 72 bp GTTTGGGAAAGTTCTCAGCCGTATTTCTCTGAATACTaGCCTCCACCCCATATTCTCTTTCCCCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: VWESSQPYFSEY*PPPHILFPLLL
Trigger: CAGAAGGAGGGGAAAGAGAATATGGGGTGGAGGCAAGTATTCAGAGAAATACGGCTGAGAACTTTCCCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCCTGAACACAAAGCTCTaGCCCTGCCGATGCGCTTTA +
Preference number: 4 (lower is better)
Translates to: VPENFSLRESDIKQNVLILNTKL*PCRCAL
Trigger: TAAAGCGCATCGGCAGGGTCAGAGCTTTGTGTTCAG...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CAA 72 bp TCTGCTGGGCCTTGTTTATGGTACTGTGTGTGTGTGTaGACAATTTCTTTCCTGTACCTTAGGATGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SAGPCLWYCVCV*TISFLYLRMFW
Trigger: CCAAAACATCCTAAGGTACAGGAAAGAAATTGTCAACACACACACACAGTACCATAAACAAGGCCCAGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CAA 72 bp CTCATATTTTCCAGCTCTGTCTTTCTGTGCTGCACTTaGGGTCATTTCTTCAAACAGTTCCCGATTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LIFSSSVFLCCT*GHFFKQFPILQ
Trigger: CTGAAGAATCGGGAACTGTTTGAAGAAATGACCCAAAGTGCAGCACAGAAAGACAGAGCTGGAAAATATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR TCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCAACTGGCTGGGAAGCTaGTCAAATGTCTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: VPENFSLRESDIKQNVLINWLGS*SNVSMP
Trigger: TGGCATGGAGACATTTGATCAGCTTCCCAGCCAGTT...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCTCAGAGGCTCTGATGTaGAGAGGACCCTTGATCTTC +
Preference number: 4 (lower is better)
Translates to: VPENFSLRESDIKQNVLISEALM*RGPLIF
Trigger: GAAGATCAAGGGTCCTCTGCACATCAGAGCCTCTGA...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCAGAGTCTTGATATGTTaGCCAGGCTGCTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: VPENFSLRESDIKQNVLIRVLIC*PGCSQT
Trigger: AGTTTGAGAGCAGCCTGGGCAACATATCAAGACTCT...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
3UTR CAA 72 bp GTAAATTGCGGATGTCATACTAAACTCTCCATCTTCTaGTCTCATCCCATCTCATATTTTCCAGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: VNCGCHTKLSIF*SHPISYFPALS
Trigger: AGACAGAGCTGGAAAATATGAGATGGGATGAGACAAGAAGATGGAGAGTTTAGTATGACATCCGCAATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR GCA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCAGGAAAATACAAGCATaGTTTCCTAAAGATGCACCA +
Preference number: 4 (lower is better)
Translates to: VPENFSLRESDIKQNVLIRKIQA*FPKDAP
Trigger: TGGTGCATCTTTAGGAAAGCATGCTTGTATTTTCCT...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS GCA 90 bp CTAGCAGGAAGGGCGCCGCGTCGGGGCCACGCACGCGCAGCAGGGTaGGCCCGTCCAGCCGGAAGCAGGCCCAGGCCGCTCCGGCCGTTG +
Preference number: 5 (lower is better)
Translates to: LAGRAPRRGHARAAG*ARPAGSRPRPLRPL
Trigger: CAACGGCCGGAGCGGCCTGGGCCTGCTTCCGGCTGGACGGGCGCACCCTGCTGCGCGTGCGTGGCCCCGACGCGGCGCCCTTCCTGCTAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS GCA 90 bp GGAAGCAGGCCCAGGCCGCTCCGGCCGTTGGGTCGCCACCAGGACTaGAGGAGCTGTGGGCCAGGCGGCACCTTGGGGCCGCGCGCAGCC +
Preference number: 5 (lower is better)
Translates to: GSRPRPLRPLGRHQD*RSCGPGGTLGPRAA
Trigger: GGCTGCGCGCGGCCCCAAGGTGCCGCCTGGCCCACAGCTCCTGCAGTCCTGGTGGCGACCCAACGGCCGGAGCGGCCTGGGCCTGCTTCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS CCA 90 bp CTGCCCTCTCCTGCAGCGATGCAGCCCCGCAGGCCTCAGGGGAACTaGGCAACACCGCCCACACTCGCAGCTCCGGGTGCGGCTCCACCG +
Preference number: 5 (lower is better)
Translates to: LPSPAAMQPRRPQGN*ATPPTLAAPGAAPP
Trigger: CGGTGGAGCCGCACCCGGAGCTGCGAGTGTGGGCGGTGTTGCCCAGTTCCCCTGAGGCCTGCGGGGCTGCATCGCTGCAGGAGAGGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS GCA 90 bp GCCTCAGGGGAACTGGGCAACACCGCCCACACTCGCAGCTCCGGGTaGGGCTCCACCGTGACCTTCCGCCGGATCCTGTATAGCGCGAGG +
Preference number: 5 (lower is better)
Translates to: ASGELGNTAHTRSSG*GSTVTFRRILYSAR
Trigger: CCTCGCGCTATACAGGATCCGGCGGAAGGTCACGGTGGAGCCGCACCCGGAGCTGCGAGTGTGGGCGGTGTTGCCCAGTTCCCCTGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS-3UTR CAA 90 bp CAGACAACCCTGTGTGGAGCCACGATTGGGACCCGGCGCCATCTGGAGCCCAGCCTCCCTGCCCCAGGGTaGGCACGTGGAGCACTGCCC +
Preference number: 5 (lower is better)
Translates to: QTTLCGATIGTRRHLEPSLPAPG*ARGALP
Trigger: GGGCAGTGCTCCACGTGCCAACCCTGGGGCAGGGAG...GCTGGGCTCCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACAGGGTTGTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS TCA 90 bp TGGGCAACACCGCCCACACTCGCAGCTCCGGGTGCGGCTCCACCGTaGCCTTCCGCCGGATCCTGTATAGCGCGAGGTGCTTCTGCAGCG +
Preference number: 5 (lower is better)
Translates to: WATPPTLAAPGAAPP*PSAGSCIARGASAA
Trigger: CGCTGCAGAAGCACCTCGCGCTATACAGGATCCGGCGGAAGGTCACGGTGGAGCCGCACCCGGAGCTGCGAGTGTGGGCGGTGTTGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS CCA 90 bp GGACCCGGGCAGAGGGACAGATGTGAGGTCATGGGCACAGGATGCTaGGCGCCGGACAGGCAGGGAGGAGCTGAGCGACGCCAGGCAGTA +
Preference number: 5 (lower is better)
Translates to: GPGQRDRCEVMGTGC*APDRQGGAERRQAV
Trigger: TACTGCCTGGCGTCGCTCAGCTCCTCCCTGCCTGTCCGGCGCCCAGCATCCTGTGCCCATGACCTCACATCTGTCCCTCTGCCCGGGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484749.5
CDS TCA 90 bp TGGGAAGGGGGTCCAAGAACCGGACAGGGAAGAGGCGCTTGCGGATaGCGCCCATGTGGTGGGTGCGGGCCGTCAGCTCCTGGCCAATGT +
Preference number: 5 (lower is better)
Translates to: WEGGPRTGQGRGACG*RPCGGCGPSAPGQC
Trigger: ACATTGGCCAGGAGCTGACGGCCCGCACCCACCACATGGGCGTCATCCGCAAGCGCCTCTTCCCTGTCCGGTTCTTGGACCCCCTTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS TCA 90 bp TCTCTGACCACAGCAGGGCCAGCCCCACGTTGCCCTGGCCAGCCCTaGACTTGCCCACAGTCTGTCCTGAGGCAGTCAGCACCGTGGCAC +
Preference number: 5 (lower is better)
Translates to: SLTTAGPAPRCPGQP*TCPQSVLRQSAPWH
Trigger: GTGCCACGGTGCTGACTGCCTCAGGACAGACTGTGGGCAAGTTCAGGGCTGGCCAGGGCAACGTGGGGCTGGCCCTGCTGTGGTCAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS GCA 90 bp TGCGGCTCCACCGTGACCTTCCGCCGGATCCTGTATAGCGCGAGGTaGTTCTGCAGCGCGCCCTGCACCGAGCTGTCACACTCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: CGSTVTFRRILYSAR*FCSAPCTELSHSRR
Trigger: CCTTCTGGAGTGTGACAGCTCGGTGCAGGGCGCGCTGCAGAAGCACCTCGCGCTATACAGGATCCGGCGGAAGGTCACGGTGGAGCCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS TCA 90 bp GGCACCCTCAGAGGCTCTGATGTGCAGAGGACCCTTGATCTTCTCTaGCCACAGCAGGGCCAGCCCCACGTTGCCCTGGCCAGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: GTLRGSDVQRTLDLL*PQQGQPHVALASPE
Trigger: TTCAGGGCTGGCCAGGGCAACGTGGGGCTGGCCCTGCTGTGGTCAGAGAAGATCAAGGGTCCTCTGCACATCAGAGCCTCTGAGGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS TCA 90 bp CAGCCCTCCTCAGAGGATTTGGGCAGGCACCACAAGAATGACCCCTaGCCAGACGGATGGTGGGAAGAGGAGAGGCTGGGCAGCGTGGGG +
Preference number: 5 (lower is better)
Translates to: QPSSEDLGRHHKNDP*PDGWWEEERLGSVG
Trigger: CCCCACGCTGCCCAGCCTCTCCTCTTCCCACCATCCGTCTGGTCAGGGGTCATTCTTGTGGTGCCTGCCCAAATCCTCTGAGGAGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484749.5
CDS GCA 90 bp TCCACCGTGACCTTCCGCCGGATCCTGTATAGCGCGAGGTGCTTCTaGAGCGCGCCCTGCACCGAGCTGTCACACTCCAGAAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: STVTFRRILYSARCF*SAPCTELSHSRRKP
Trigger: TGGCTTCCTTCTGGAGTGTGACAGCTCGGTGCAGGGCGCGCTGCAGAAGCACCTCGCGCTATACAGGATCCGGCGGAAGGTCACGGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS CCA 90 bp CCCTTGATCTTCTCTGACCACAGCAGGGCCAGCCCCACGTTGCCCTaGCCAGCCCTGAACTTGCCCACAGTCTGTCCTGAGGCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: PLIFSDHSRASPTLP*PALNLPTVCPEAVS
Trigger: GCTGACTGCCTCAGGACAGACTGTGGGCAAGTTCAGGGCTGGCCAGGGCAACGTGGGGCTGGCCCTGCTGTGGTCAGAGAAGATCAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS-3UTR CAA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCTGTGTGGAGCCACGATaGGGACCCGGCGCCATCTGG +
Preference number: 5 (lower is better)
Translates to: SAMQPHQSRAHLYLARALCVEPR*GPGAIW
Trigger: CCAGATGGCGCCGGGTCCCAATCGTGGCTCCACACA...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS TCA 90 bp CTCCAGGCAGCCCTCCTCAGAGGATTTGGGCAGGCACCACAAGAATaGCCCCTGACCAGACGGATGGTGGGAAGAGGAGAGGCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: LQAALLRGFGQAPQE*PLTRRMVGRGEAGQ
Trigger: CTGCCCAGCCTCTCCTCTTCCCACCATCCGTCTGGTCAGGGGTCATTCTTGTGGTGCCTGCCCAAATCCTCTGAGGAGGGCTGCCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484749.5
CDS GCA 90 bp TCCTTGCCAGTTGCCCAGGGCTTCAGGTGCCAAGCAGGGGCCTGCTaGCCTCATCTCTGCAGTCTCACTCTACCCTGTGGTCATGCCCAC +
Preference number: 5 (lower is better)
Translates to: SLPVAQGFRCQAGAC*PHLCSLTLPCGHAH
Trigger: GTGGGCATGACCACAGGGTAGAGTGAGACTGCAGAGATGAGGGCAGCAGGCCCCTGCTTGGCACCTGAAGCCCTGGGCAACTGGCAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484749.5
CDS GCA 90 bp CAGTCCTTGCCAGTTGCCCAGGGCTTCAGGTGCCAAGCAGGGGCCTaGTGCCCTCATCTCTGCAGTCTCACTCTACCCTGTGGTCATGCC +
Preference number: 5 (lower is better)
Translates to: QSLPVAQGFRCQAGA*CPHLCSLTLPCGHA
Trigger: GGCATGACCACAGGGTAGAGTGAGACTGCAGAGATGAGGGCAGCAGGCCCCTGCTTGGCACCTGAAGCCCTGGGCAACTGGCAAGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484749.5
CDS CCA 90 bp AGCAGGGGCCTGCTGCCCTCATCTCTGCAGTCTCACTCTACCCTGTaGTCATGCCCACGTGCCAGCAGCCACGGAGAACGTTCACGCTCA +
Preference number: 5 (lower is better)
Translates to: SRGLLPSSLQSHSTL*SCPRASSHGERSRS
Trigger: TGAGCGTGAACGTTCTCCGTGGCTGCTGGCACGTGGGCATGACCACAGGGTAGAGTGAGACTGCAGAGATGAGGGCAGCAGGCCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484749.5
CDS-3UTR CAA 90 bp TCCGCAATGCAGCCTCACCAGTCCAGAGCCCACCTCTATCTGGCCAGAGCACTCCCCCTCAGGAACGCCTaGCAGGTATCGGTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: SAMQPHQSRAHLYLARALPLRNA*QVSVLV
Trigger: CACCAGCACCGATACCTGCAAGGCGTTCCTGAGGGG...GAGTGCTCTGGCCAGATAGAGGTGGGCTCTGGACTGGTGAGGCTGCATTGCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACCCATGGGGCTGTCCTTaGCAGACTCGGCACCCACGT +
Preference number: 5 (lower is better)
Translates to: ELPNRQCGLRKWKADVGDPWGCP*QTRHPR
Trigger: ACGTGGGTGCCGAGTCTGCAAAGGACAGCCCCATGG...GTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS GCA 90 bp GCCCTCATCTCTGCAGTCTCACTCTACCCTGTGGTCATGCCCACGTaGCAGCAGCCACGGAGAACGTTCACGCTCATCACCCAGAACCAG +
Preference number: 5 (lower is better)
Translates to: ALISAVSLYPVVMPT*QQPRRTFTLITQNQ
Trigger: CTGGTTCTGGGTGATGAGCGTGAACGTTCTCCGTGGCTGCTGGCACGTGGGCATGACCACAGGGTAGAGTGAGACTGCAGAGATGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484749.5
CDS CCA 90 bp GAGACTGTAGGCCACCAGTCTGGCACAGATGCGGCTAAGGCCACCTaGGCACCCTCAGAGGCTCTGATGTGCAGAGGACCCTTGATCTTC +
Preference number: 5 (lower is better)
Translates to: ETVGHQSGTDAAKAT*APSEALMCRGPLIF
Trigger: GAAGATCAAGGGTCCTCTGCACATCAGAGCCTCTGAGGGTGCCCAGGTGGCCTTAGCCGCATCTGTGCCAGACTGGTGGCCTACAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS-3UTR CAA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCAACCCTAACGTCCAGCTaGGTGGCCCAAACGCCTGCC +
Preference number: 5 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSTLTSS*VAQTPA
Trigger: GGCAGGCGTTTGGGCCACCAAGCTGGACGTTAGGGT...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGAGGGGCTCCTGTTGGTTaGGGAAAGTTCTCAGCCGTA +
Preference number: 5 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGGAPVG*GKFSAV
Trigger: TACGGCTGAGAACTTTCCCAAACCAACAGGAGCCCC...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGACAGGGAAGAGGCGCTaGCGGATGACGCCCATGTGG +
Preference number: 5 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLTGKRR*RMTPMW
Trigger: CCACATGGGCGTCATCCGCAAGCGCCTCTTCCCTGT...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GGAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACACCTAGCTGTTTCCTaGCCCATAGGAGAGCTGACT +
Preference number: 5 (lower is better)
Translates to: GAAQQAMWAQKVEGGCGGHLAVS*PIGELT
Trigger: AGTCAGCTCTCCTATGGGCAAGGAAACAGCTAGGTG...TCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS TCA 90 bp CCACAAGGGAGGGGAACATATGTCATTTACACACGTGGGCTAAGATaGCGGGAGGAACAGCAAGGACAGCACAGAGGGGCAGCCGCAGGT +
Preference number: 5 (lower is better)
Translates to: PQGRGTYVIYTRGLR*REEQQGQHRGAAAG
Trigger: ACCTGCGGCTGCCCCTCTGTGCTGTCCTTGCTGTTCCTCCCGTCATCTTAGCCCACGTGTGTAAATGACATATGTTCCCCTCCCTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484749.5
CDS-3UTR CAA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGGGAAGCGGCAGTTCATaGGTCAGCAGCCCTAGCAGG +
Preference number: 5 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLGSGSS*VSSPSR
Trigger: CCTGCTAGGGCTGCTGACCAATGAACTGCCGCTTCC...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGTGGCCAGCCCTGAACTaGCCCACAGTCTGTCCTGAG +
Preference number: 5 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLWPALN*PTVCPE
Trigger: CTCAGGACAGACTGTGGGCAAGTTCAGGGCTGGCCA...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS CCA 90 bp AGGTGCCACTACACCATGTGGGACTTCTCAGCAAGAACAGGGAGCTaGAGATGGACAGAAGTGGGTGGATCTGAGGGCACTATGGTGAGG +
Preference number: 5 (lower is better)
Translates to: RCHYTMWDFSARTGS*RWTEVGGSEGTMVR
Trigger: CCTCACCATAGTGCCCTCAGATCCACCCACTTCTGTCCATCTCCAGCTCCCTGTTCTTGCTGAGAAGTCCCACATGGTGTAGTGGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484749.5
CDS-3UTR CAA 90 bp CCAGGCAACTTCAGGCAGATGACAGAGCCGGGACACTTTGAGCTCGAGGCACAGCAGAGTCTTGATATGTaGCCCAGGCTGCTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: PGNFRQMTEPGHFELEAQQSLDM*PRLLSN
Trigger: GTTTGAGAGCAGCCTGGGCAACATATCAAGACTCTG...CTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp CCAGGCAACTTCAGGCAGATGACAGAGCCGGGACACTTTGAGCTCGAGGCACAGGACCCCCTGCTATTATaGTCCCTGAGAACTTCTCAC +
Preference number: 5 (lower is better)
Translates to: PGNFRQMTEPGHFELEAQDPLLL*SLRTSH
Trigger: GTGAGAAGTTCTCAGGGACAATAATAGCAGGGGGTC...CTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGAAGGCTTCGGACTACTaGGAGACTGTAGGCCACCAG +
Preference number: 5 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLKASDY*ETVGHQ
Trigger: CTGGTGGCCTACAGTCTCCAAGTAGTCCGAAGCCTT...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp TTCCTCCCGTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTCTCCAAGATGGTGCTTaGAACACTGGAGGGCAAGAG +
Preference number: 5 (lower is better)
Translates to: FLPSIRSTPSSWVITNYTLQDGA*NTGGQE
Trigger: CTCTTGCCCTCCAGTGTTCAAAGCACCATCTTGGAG...AGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGACGGGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACAGAGGGGCTCTTTTGTaGACTGACACTTTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: ELPNRQCGLRKWKADVGDRGALL*TDTFLF
Trigger: AAAAAGGAAAGTGTCAGTCAACAAAAGAGCCCCTCT...GTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GAGCTGCCCAACAGGCAATGTGGGCTCAGAAAGTGGAAGGCGGATGTGGGGGACTTGGTGAAAACTGATTaGGTTTGTATGACAGAGGGG +
Preference number: 5 (lower is better)
Translates to: ELPNRQCGLRKWKADVGDLVKTD*VCMTEG
Trigger: CCCCTCTGTCATACAAACCAAATCAGTTTTCACCAA...GTCCCCCACATCCGCCTTCCACTTTCTGAGCCCACATTGCCTGTTGGGCAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCAAGCAGTGTGCAGTTTaGGAGCGGCTACACCAGCTC +
Preference number: 5 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSKQCAV*ERLHQL
Trigger: GAGCTGGTGTAGCCGCTCCAAAACTGCACACTGCTT...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCACCTTTCTGCTGGGCCTaGTTTATGGTACTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSPFCWA*FMVLCV
Trigger: CACACACAGTACCATAAACAAGGCCCAGCAGAAAGG...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCGAGCAGGGGCTCCTGTaGGTTTGGGAAAGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSEQGLL*VWESSQ
Trigger: CTGAGAACTTTCCCAAACCAACAGGAGCCCCTGCTC...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGCCCAATCCCAGCTACTaGGGGACAAGAGTTGAAGAC +
Preference number: 5 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLPNPSY*GTRVED
Trigger: GTCTTCAACTCTTGTCCCCAAGTAGCTGGGATTGGG...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCAGGCCGCTCCGGCCGTaGGGTCGCCACCAGGACTGC +
Preference number: 5 (lower is better)
Translates to: VPENFSLRESDIKQNVLIRPLRP*GRHQDC
Trigger: GCAGTCCTGGTGGCGACCCAACGGCCGGAGCGGCCT...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCATGTGCAGAGGACCCTaGATCTTCTCTGACCACAGC +
Preference number: 5 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSMCRGP*IFSDHS
Trigger: GCTGTGGTCAGAGAAGATCAAGGGTCCTCTGCACAT...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp TTCCTCCCGTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTTATCTAAGGCCTGATTaGGAGGTGGGTTTCTCACAG +
Preference number: 5 (lower is better)
Translates to: FLPSIRSTPSSWVITNYTYLRPD*EVGFSQ
Trigger: CTGTGAGAAACCCACCTCCAAATCAGGCCTTAGATA...AGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGACGGGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGCACAGAACAGGGAGCTaGTCTCCTTGGGGATTAGAA +
Preference number: 5 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLHRTGS*SPWGLE
Trigger: TTCTAATCCCCAAGGAGACAAGCTCCCTGTTCTGTG...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp CCAGGCAACTTCAGGCAGATGACAGAGCCGGGACACTTTGAGCTCGAGGCACAGTTTCTGTGCTGCACTTaGGGTCATTTCTTCAAACAG +
Preference number: 5 (lower is better)
Translates to: PGNFRQMTEPGHFELEAQFLCCT*GHFFKQ
Trigger: CTGTTTGAAGAAATGACCCAAAGTGCAGCACAGAAA...CTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCAACTGCACCTTATGCCTaGAATTCACACACACACACA +
Preference number: 5 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSTAPYA*NSHTHT
Trigger: TGTGTGTGTGTGTGAATTCAAGGCATAAGGTGCAGT...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCGACAGAGGGGCTCTTTaGTTGACTGACACTTTCCTT +
Preference number: 5 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSDRGAL*LTDTFL
Trigger: AAGGAAAGTGTCAGTCAACAAAAGAGCCCCTCTGTC...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp CCAGGCAACTTCAGGCAGATGACAGAGCCGGGACACTTTGAGCTCGAGGCACAGAGGACTAAGGACATTTaGGTGAAAACTGATTTGGTT +
Preference number: 5 (lower is better)
Translates to: PGNFRQMTEPGHFELEAQRTKDI*VKTDLV
Trigger: AACCAAATCAGTTTTCACCAAAATGTCCTTAGTCCT...CTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTGTCATCTGCCTGAAGTTGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCATCTAAGATCAGAACATaGGTGTGTGTGCTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSSKIRT*VCVLLS
Trigger: AGACAGAAGCACACACACCAATGTTCTGATCTTAGA...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTGCAGCTCATACTGTGTGTGTGTGTaGACAATTTCTTTCCTGTAC +
Preference number: 5 (lower is better)
Translates to: VHPLYTLLLGDHKLHCSSYCVCV*TISFLY
Trigger: GTACAGGAAAGAAATTGTCAACACACACACACAGTA...TGAGCTGCAGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GGGAAGCTGATCAAATGTCTCCATGCCAGTTTAAAGCAGCAGCCAGTGGGGCTGTATTTCTCTGAATACTaGCCTCCACCCCATATTCTC +
Preference number: 5 (lower is better)
Translates to: GKLIKCLHASLKQQPVGLYFSEY*PPPHIL
Trigger: GAGAATATGGGGTGGAGGCAAGTATTCAGAGAAATA...CAGCCCCACTGGCTGCTGCTTTAAACTGGCATGGAGACATTTGATCAGCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GTCCCTGAGAACTTCTCACTGAGAGAGTCTGACATAAAACAAAATGTATTAATCCAGAGCCGGGACACTTaGAGCTCGAGGCACAGACCC +
Preference number: 5 (lower is better)
Translates to: VPENFSLRESDIKQNVLIQSRDT*SSRHRP
Trigger: GGGTCTGTGCCTCGAGCTCAAAGTGTCCCGGCTCTG...GATTAATACATTTTGTTTTATGTCAGACTCTCTCAGTGAGAAGTTCTCAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp TTCCTCCCGTCCATCCGCTCTACACCCTCCTCCTGGGTGATCACAAACTACACTTTCTGGCTTCCACTGTaGCTTTTAATCAACTACTTA +
Preference number: 5 (lower is better)
Translates to: FLPSIRSTPSSWVITNYTFWLPL*LLINYL
Trigger: TAAGTAGTTGATTAAAAGCAACAGTGGAAGCCAGAA...AGTGTAGTTTGTGATCACCCAGGAGGAGGGTGTAGAGCGGATGGACGGGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCAAACTCTCCATCTTCTaGTCTCATCCCATCTCATAT +
Preference number: 5 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSKLSIF*SHPISY
Trigger: ATATGAGATGGGATGAGACAAGAAGATGGAGAGTTT...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS-3UTR CAA 90 bp GAGGGCAAGAGAGGCACAAGCGGGCTGGACTTACCCTTTCATAACATTAACTCCCTCCCAACTACGATTTaGAGTTTGTTCATTTCTCCT +
Preference number: 5 (lower is better)
Translates to: EGKRGTSGLDLPFHNINSLPTTI*SLFISP
Trigger: AGGAGAAATGAACAAACTCAAAATCGTAGTTGGGAG...GGAGTTAATGTTATGAAAGGGTAAGTCCAGCCCGCTTGTGCCTCTCTTGCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS TCA 72 bp GCCGCCACCCCATGCGTGCTGTTCGCGGGTCGCGGATaGGGATGGCGGCAGCCCCTGCCCTCTCCTGCAGCG +
Preference number: 6 (lower is better)
Translates to: AATPCVLFAGRG*GWRQPLPSPAA
Trigger: CGCTGCAGGAGAGGGCAGGGGCTGCCGCCATCCTCATCCGCGACCCGCGAACAGCACGCATGGGGTGGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS CCA 72 bp CCCCCGCGGCCGCAGGACTCGGAAGCGGCAGTTCATTaGTCAGCAGCCCTAGCAGGAAGGGCGCCGCGTCGG +
Preference number: 6 (lower is better)
Translates to: PPRPQDSEAAVH*SAALAGRAPRR
Trigger: CCGACGCGGCGCCCTTCCTGCTAGGGCTGCTGACCAATGAACTGCCGCTTCCGAGTCCTGCGGCCGCGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS CCA 72 bp CCTGCAGCGATGCAGCCCCGCAGGCCTCAGGGGAACTaGGCAACACCGCCCACACTCGCAGCTCCGGGTGCG +
Preference number: 6 (lower is better)
Translates to: PAAMQPRRPQGN*ATPPTLAAPGA
Trigger: CGCACCCGGAGCTGCGAGTGTGGGCGGTGTTGCCCAGTTCCCCTGAGGCCTGCGGGGCTGCATCGCTGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS CAA 72 bp GCCCCCGCGGCCGCAGGACTCGGAAGCGGCAGTTCATaGGTCAGCAGCCCTAGCAGGAAGGGCGCCGCGTCG +
Preference number: 6 (lower is better)
Translates to: APAAAGLGSGSS*VSSPSRKGAAS
Trigger: CGACGCGGCGCCCTTCCTGCTAGGGCTGCTGACCAATGAACTGCCGCTTCCGAGTCCTGCGGCCGCGGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366711.4
CDS TCA 72 bp CCGCCCACACTCGCAGCTCCGGGTGCGGCTCCACCGTaGCCTTCCGCCGGATCCTGTATAGCGCGAGGTGCT +
Preference number: 6 (lower is better)
Translates to: PPTLAAPGAAPP*PSAGSCIARGA
Trigger: AGCACCTCGCGCTATACAGGATCCGGCGGAAGGTCACGGTGGAGCCGCACCCGGAGCTGCGAGTGTGGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS GCA 72 bp GCCTTCATCCTGGGTGAGGAGCCGCCACCCCATGCGTaGTGTTCGCGGGTCGCGGATGAGGATGGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: AFILGEEPPPHA*CSRVADEDGGS
Trigger: GCTGCCGCCATCCTCATCCGCGACCCGCGAACAGCACGCATGGGGTGGCGGCTCCTCACCCAGGATGAAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS CCA 72 bp GTGGGGGACCCGGGCAGAGGGACAGATGTGAGGTCATaGGCACAGGATGCTGGGCGCCGGACAGGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: VGDPGRGTDVRS*AQDAGRRTGRE
Trigger: CTCCCTGCCTGTCCGGCGCCCAGCATCCTGTGCCCATGACCTCACATCTGTCCCTCTGCCCGGGTCCCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484749.5
CDS CAA 90 bp CCACTGGTGGGAAGGGGGTCCAAGAACCGGACAGGGAAGAGGCGCTaGCGGATGACGCCCATGTGGTGGGTGCGGGCCGTCAGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: PLVGRGSKNRTGKRR*RMTPMWWVRAVSSW
Trigger: CCAGGAGCTGACGGCCCGCACCCACCACATGGGCGTCATCCGCAAGCGCCTCTTCCCTGTCCGGTTCTTGGACCCCCTTCCCACCAGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS CAA 90 bp GACCACAGCAGGGCCAGCCCCACGTTGCCCTGGCCAGCCCTGAACTaGCCCACAGTCTGTCCTGAGGCAGTCAGCACCGTGGCACCAGGG +
Preference number: 6 (lower is better)
Translates to: DHSRASPTLPWPALN*PTVCPEAVSTVAPG
Trigger: CCCTGGTGCCACGGTGCTGACTGCCTCAGGACAGACTGTGGGCAAGTTCAGGGCTGGCCAGGGCAACGTGGGGCTGGCCCTGCTGTGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS CAA 72 bp GGAAGGGGGTCCAAGAACCGGACAGGGAAGAGGCGCTaGCGGATGACGCCCATGTGGTGGGTGCGGGCCGTC +
Preference number: 6 (lower is better)
Translates to: GRGSKNRTGKRR*RMTPMWWVRAV
Trigger: GACGGCCCGCACCCACCACATGGGCGTCATCCGCAAGCGCCTCTTCCCTGTCCGGTTCTTGGACCCCCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS TCA 72 bp GGTCCAAGAACCGGACAGGGAAGAGGCGCTTGCGGATaGCGCCCATGTGGTGGGTGCGGGCCGTCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: GPRTGQGRGACG*RPCGGCGPSAP
Trigger: AGGAGCTGACGGCCCGCACCCACCACATGGGCGTCATCCGCAAGCGCCTCTTCCCTGTCCGGTTCTTGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS GCA 72 bp GAACTGGGCAACACCGCCCACACTCGCAGCTCCGGGTaGGGCTCCACCGTGACCTTCCGCCGGATCCTGTAT +
Preference number: 6 (lower is better)
Translates to: ELGNTAHTRSSG*GSTVTFRRILY
Trigger: ATACAGGATCCGGCGGAAGGTCACGGTGGAGCCGCACCCGGAGCTGCGAGTGTGGGCGGTGTTGCCCAGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS CCA 72 bp CCCAGAGGGCCTTCCAGAGACAAGCCCAAGAGCAGGTaGCCCAGCCCCTTCCAGCCAGGAGAGGGCTCAGTC +
Preference number: 6 (lower is better)
Translates to: PRGPSRDKPKSR*PSPFQPGEGSV
Trigger: GACTGAGCCCTCTCCTGGCTGGAAGGGGCTGGGCCACCTGCTCTTGGGCTTGTCTCTGGAAGGCCCTCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484749.5
CDS CAA 72 bp AGGGCCAGCCCCACGTTGCCCTGGCCAGCCCTGAACTaGCCCACAGTCTGTCCTGAGGCAGTCAGCACCGTG +
Preference number: 6 (lower is better)
Translates to: RASPTLPWPALN*PTVCPEAVSTV
Trigger: CACGGTGCTGACTGCCTCAGGACAGACTGTGGGCAAGTTCAGGGCTGGCCAGGGCAACGTGGGGCTGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS TCA 72 bp ACAGCAGGGCCAGCCCCACGTTGCCCTGGCCAGCCCTaGACTTGCCCACAGTCTGTCCTGAGGCAGTCAGCA +
Preference number: 6 (lower is better)
Translates to: TAGPAPRCPGQP*TCPQSVLRQSA
Trigger: TGCTGACTGCCTCAGGACAGACTGTGGGCAAGTTCAGGGCTGGCCAGGGCAACGTGGGGCTGGCCCTGCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS GCA 72 bp ACCGTGACCTTCCGCCGGATCCTGTATAGCGCGAGGTaGTTCTGCAGCGCGCCCTGCACCGAGCTGTCACAC +
Preference number: 6 (lower is better)
Translates to: TVTFRRILYSAR*FCSAPCTELSH
Trigger: GTGTGACAGCTCGGTGCAGGGCGCGCTGCAGAAGCACCTCGCGCTATACAGGATCCGGCGGAAGGTCACGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS CCA 72 bp GGCCACCAGTCTGGCACAGATGCGGCTAAGGCCACCTaGGCACCCTCAGAGGCTCTGATGTGCAGAGGACCC +
Preference number: 6 (lower is better)
Translates to: GHQSGTDAAKAT*APSEALMCRGP
Trigger: GGGTCCTCTGCACATCAGAGCCTCTGAGGGTGCCCAGGTGGCCTTAGCCGCATCTGTGCCAGACTGGTGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS GCA 72 bp ACCTTCCGCCGGATCCTGTATAGCGCGAGGTGCTTCTaGAGCGCGCCCTGCACCGAGCTGTCACACTCCAGA +
Preference number: 6 (lower is better)
Translates to: TFRRILYSARCF*SAPCTELSHSR
Trigger: TCTGGAGTGTGACAGCTCGGTGCAGGGCGCGCTGCAGAAGCACCTCGCGCTATACAGGATCCGGCGGAAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS CCA 72 bp CCCCATCTGCTGAGCACTCCCTGGCCTCACACAGGGTaGATGTCCTCACAGGACCCAGGTTCTGGGGTCGAG +
Preference number: 6 (lower is better)
Translates to: PHLLSTPWPHTG*MSSQDPGSGVE
Trigger: CTCGACCCCAGAACCTGGGTCCTGTGAGGACATCCACCCTGTGTGAGGCCAGGGAGTGCTCAGCAGATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484749.5
CDS CCA 72 bp CGAGTGTTCCTGGAGCCCGGGCAGAGGAGCACACCGTaGACCAACGCAAAGAGCTCTGCCCTCAGCCACAAG +
Preference number: 6 (lower is better)
Translates to: RVFLEPGQRSTP*TNAKSSALSHK
Trigger: CTTGTGGCTGAGGGCAGAGCTCTTTGCGTTGGTCCACGGTGTGCTCCTCTGCCCGGGCTCCAGGAACACTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546123.2
CDS CAA 90 bp AAGGCCACCTGGGCACCCTCAGAGGCTCTGATGTGCAGAGGACCCTaGATCTTCTCTGACCACAGCAGGGCCAGCCCCACGTTGCCCTGG +
Preference number: 6 (lower is better)
Translates to: KATWAPSEALMCRGP*IFSDHSRASPTLPW
Trigger: CCAGGGCAACGTGGGGCTGGCCCTGCTGTGGTCAGAGAAGATCAAGGGTCCTCTGCACATCAGAGCCTCTGAGGGTGCCCAGGTGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS CAA 72 bp TGGGCACCCTCAGAGGCTCTGATGTGCAGAGGACCCTaGATCTTCTCTGACCACAGCAGGGCCAGCCCCACG +
Preference number: 6 (lower is better)
Translates to: WAPSEALMCRGP*IFSDHSRASPT
Trigger: CGTGGGGCTGGCCCTGCTGTGGTCAGAGAAGATCAAGGGTCCTCTGCACATCAGAGCCTCTGAGGGTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS GCA 72 bp ATCCTGTATAGCGCGAGGTGCTTCTGCAGCGCGCCCTaGACCGAGCTGTCACACTCCAGAAGGAAGCCAGAC +
Preference number: 6 (lower is better)
Translates to: ILYSARCFCSAP*TELSHSRRKPD
Trigger: GTCTGGCTTCCTTCTGGAGTGTGACAGCTCGGTGCAGGGCGCGCTGCAGAAGCACCTCGCGCTATACAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS TCA 72 bp GCCCTCCTCAGAGGATTTGGGCAGGCACCACAAGAATaGCCCCTGACCAGACGGATGGTGGGAAGAGGAGAG +
Preference number: 6 (lower is better)
Translates to: ALLRGFGQAPQE*PLTRRMVGRGE
Trigger: CTCTCCTCTTCCCACCATCCGTCTGGTCAGGGGTCATTCTTGTGGTGCCTGCCCAAATCCTCTGAGGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484749.5
CDS GCA 72 bp GCTAAGGCCACCTGGGCACCCTCAGAGGCTCTGATGTaGAGAGGACCCTTGATCTTCTCTGACCACAGCAGG +
Preference number: 6 (lower is better)
Translates to: AKATWAPSEALM*RGPLIFSDHSR
Trigger: CCTGCTGTGGTCAGAGAAGATCAAGGGTCCTCTGCACATCAGAGCCTCTGAGGGTGCCCAGGTGGCCTTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366711.4
ENST00000484749.5
ENST00000546123.2
CDS GCA 72 bp TCTGCAGTCTCACTCTACCCTGTGGTCATGCCCACGTaGCAGCAGCCACGGAGAACGTTCACGCTCATCACC +
Preference number: 6 (lower is better)
Translates to: SAVSLYPVVMPT*QQPRRTFTLIT
Trigger: GGTGATGAGCGTGAACGTTCTCCGTGGCTGCTGGCACGTGGGCATGACCACAGGGTAGAGTGAGACTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484749.5
CDS GCA 72 bp ACCTGGGGTACAGCCACCTCCATGGCTGGGGTTGATTaGAGGTATGGACTGCACAGGGCTTCACAGGCTGGT +
Preference number: 6 (lower is better)
Translates to: TWGTATSMAGVD*RYGLHRASQAG
Trigger: ACCAGCCTGTGAAGCCCTGTGCAGTCCATACCTGCAATCAACCCCAGCCATGGAGGTGGCTGTACCCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484749.5
CDS CCA 72 bp TTGCAGGTATGGACTGCACAGGGCTTCACAGGCTGGTaGGAGCTGAGACAGGGAGGTAGTAAGACCCCCAGA +
Preference number: 6 (lower is better)
Translates to: LQVWTAQGFTGW*ELRQGGSKTPR
Trigger: TCTGGGGGTCTTACTACCTCCCTGTCTCAGCTCCCACCAGCCTGTGAAGCCCTGTGCAGTCCATACCTGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484749.5
CDS TCA 72 bp CCCATTCAGGGGCAGGAGCAGGAAGCCGCGTGGGCCTaGGAATGGCCACAGATATTCACACGTGATAAAACT +
Preference number: 6 (lower is better)
Translates to: PIQGQEQEAAWA*EWPQIFTRDKT
Trigger: AGTTTTATCACGTGTGAATATCTGTGGCCATTCTCAGGCCCACGCGGCTTCCTGCTCCTGCCCCTGAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484749.5
CDS TCA 72 bp AGGGGAACATATGTCATTTACACACGTGGGCTAAGATaGCGGGAGGAACAGCAAGGACAGCACAGAGGGGCA +
Preference number: 6 (lower is better)
Translates to: RGTYVIYTRGLR*REEQQGQHRGA
Trigger: TGCCCCTCTGTGCTGTCCTTGCTGTTCCTCCCGTCATCTTAGCCCACGTGTGTAAATGACATATGTTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484749.5
CDS TCA 72 bp GGCACTATGGTGAGGGAAAAGGGTAAGGCTAAAAAGTaGCAGGCCGATGCATCCATCTATGACACTCCTGAA +
Preference number: 6 (lower is better)
Translates to: GTMVREKGKAKK*QADASIYDTPE
Trigger: TTCAGGAGTGTCATAGATGGATGCATCGGCCTGTCACTTTTTAGCCTTACCCTTTTCCCTCACCATAGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484749.5