RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HYPK (Homo sapiens)

Ensembl gene IDs: ENSG00000242028

Ensembl transcript IDs: ENST00000406925.6, ENST00000442995.4, ENST00000458412.2, ENST00000498605.1

Found 315 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCATGTTACATAGGTTCCCAGGCATTAATGTGCCACCAAATATACTaGCTCCGCTTGTTTCAGGAAACAACCCAAATTAAGCAGAATAGC +
Preference number: 1 (lower is better)
Translates to: SCYIGSQALMCHQIY*LRLFQETTQIKQNS
Trigger: GCTATTCTGCTTAATTTGGGTTGTTTCCTGAAACAAGCGGAGTCAGTATATTTGGTGGCACATTAATGCCTGGGAACCTATGTAACATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458412.2
3UTR-3UTR TCA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCACTCCTGATCCCAGGTaGTCCACCTGCCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: GFTMLARMVLIFTSRSARTPDPR*STCLGL
Trigger: GAGGCCGAGGCAGGTGGATCACCTGGGATCAGGAGT...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR TCA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCCTGGAAATCCTGACCTaGCACAGTCCTCCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: GFTMLARMVLIFTSRSARLEILT*HSPPSP
Trigger: TGGGCTGGGAGGACTGTGTCAGGTCAGGATTTCCAG...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR CCA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCCTGTGTTGCCCAAGCTaGTCTCAAACTGCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: GFTMLARMVLIFTSRSARLCCPS*SQTAGL
Trigger: GAGCCCAGCAGTTTGAGACCAGCTTGGGCAACACAG...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR CCA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCAGCCTCCAGAATAGCTaGGATTATAGGCGCCCACCA +
Preference number: 2 (lower is better)
Translates to: GFTMLARMVLIFTSRSARSLQNS*DYRRPP
Trigger: TGGTGGGCGCCTATAATCCCAGCTATTCTGGAGGCT...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR CCA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCAGCCTCCCTAGTAGCTaGAATTACAGGCGTCCACCA +
Preference number: 2 (lower is better)
Translates to: GFTMLARMVLIFTSRSARSLPSS*NYRRPP
Trigger: TGGTGGACGCCTGTAATTCCAGCTACTAGGGAGGCT...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR CCA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCCTGGTCTCAAACTGCTaGGCTCAAGTGATCGTCTTG +
Preference number: 2 (lower is better)
Translates to: GFTMLARMVLIFTSRSARLVSNC*AQVIVL
Trigger: CAAGACGATCACTTGAGCCCAGCAGTTTGAGACCAG...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR CCA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCAGGGTTTCACCATGTTaGCCAGGCTTGTCTTCAACT +
Preference number: 2 (lower is better)
Translates to: GFTMLARMVLIFTSRSARRVSPC*PGLSST
Trigger: AGTTGAAGACAAGCCTGGCCAACATGGTGAAACCCT...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR TCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATCTGGTCTTGAATTCCTaGCCTCGTGATCTACCTGCC +
Preference number: 2 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNLVLNS*PRDLPA
Trigger: GGCAGGTAGATCACGAGGTCAGGAATTCAAGACCAG...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR TCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATACTCAAGGTGGCCTATaGACTGGGTTCATAACCTAC +
Preference number: 2 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNTQGGL*TGFITY
Trigger: GTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGT...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR TCA 90 bp TCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGGTAACTCCTGATCCCAGGTaGTCCACCTGCCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: SLLCGIQSKNYPRVRMRVTPDPR*STCLGL
Trigger: GAGGCCGAGGCAGGTGGATCACCTGGGATCAGGAGT...TACCCTCATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR TCA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCAGTATACACTCTACTTaGCCCAAGATGATAAAACTG +
Preference number: 2 (lower is better)
Translates to: GFTMLARMVLIFTSRSARSIHST*PKMIKL
Trigger: CAGTTTTATCATCTTGGGTCAAGTAGAGTGTATACT...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR TCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATACTCCAGATGTACCTTaGATACTGTTGAGAGCTAGT +
Preference number: 2 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNTPDVP*ILLRAS
Trigger: ACTAGCTCTCAACAGTATTCAAGGTACATCTGGAGT...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR TCA 90 bp TCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGGTATCTGCTTCAGCCTCCTaGGTAGCTGGGACTACAGGC +
Preference number: 2 (lower is better)
Translates to: SLLCGIQSKNYPRVRMRVSASAS*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGGAGGCTGAAGCAGA...TACCCTCATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR CCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATAGGTGGCCTATGAACTaGGTTCATAACCTACATCTA +
Preference number: 2 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNRWPMN*VHNLHL
Trigger: TAGATGTAGGTTATGAACCCAGTTCATAGGCCACCT...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR CCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATATTCATAAGCTGTCTTaGAGACACATGCCATTTGAG +
Preference number: 2 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNIHKLS*RHMPFE
Trigger: CTCAAATGGCATGTGTCTCCAAGACAGCTTATGAAT...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR CCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGCTGTGTTGCCCAAGCTaGTCTCAAACTGCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSLCCPS*SQTAGL
Trigger: GAGCCCAGCAGTTTGAGACCAGCTTGGGCAACACAG...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR TCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGCTGGTCTTGAATTCCTaGCCTCGTGATCTACCTGCC +
Preference number: 2 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSLVLNS*PRDLPA
Trigger: GGCAGGTAGATCACGAGGTCAGGAATTCAAGACCAG...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR TCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGCTTGTCTTCAACTCCTaGCCTCATGATCCGACTGCC +
Preference number: 2 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSLVFNS*PHDPTA
Trigger: GGCAGTCGGATCATGAGGTCAGGAGTTGAAGACAAG...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR CCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTAGGTGGCCTATGAACTaGGTTCATAACCTACATCTA +
Preference number: 2 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLRWPMN*VHNLHL
Trigger: TAGATGTAGGTTATGAACCCAGTTCATAGGCCACCT...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR CCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGAGCCTCCAGAATAGCTaGGATTATAGGCGCCCACCA +
Preference number: 2 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSSLQNS*DYRRPP
Trigger: TGGTGGGCGCCTATAATCCCAGCTATTCTGGAGGCT...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR CCA 90 bp TCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGGTAAGCCTCCCTAGTAGCTaGAATTACAGGCGTCCACCA +
Preference number: 2 (lower is better)
Translates to: SLLCGIQSKNYPRVRMRVSLPSS*NYRRPP
Trigger: TGGTGGACGCCTGTAATTCCAGCTACTAGGGAGGCT...TACCCTCATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR CCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGGCCACTGTGCCTAGCTaGGGCCGTCACAGTTTTATA +
Preference number: 2 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSATVPS*GRHSFI
Trigger: TATAAAACTGTGACGGCCCCAGCTAGGCACAGTGGC...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR CCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTATTCATAAGCTGTCTTaGAGACACATGCCATTTGAG +
Preference number: 2 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLIHKLS*RHMPFE
Trigger: CTCAAATGGCATGTGTCTCCAAGACAGCTTATGAAT...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR CCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGGGGGTTTCACCATTTTaGCCAGGCTCGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSGVSPF*PGSSQT
Trigger: AGTTTGAGACGAGCCTGGCCAAAATGGTGAAACCCC...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR TCA 90 bp TCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGGTAACTCAAGGTGGCCTATaGACTGGGTTCATAACCTAC +
Preference number: 2 (lower is better)
Translates to: SLLCGIQSKNYPRVRMRVTQGGL*TGFITY
Trigger: GTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGT...TACCCTCATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR TCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTTGCCACCAAATATACTaGCTCCGCTTGTTTCAGGAA +
Preference number: 2 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSCHQIY*LRLFQE
Trigger: TTCCTGAAACAAGCGGAGTCAGTATATTTGGTGGCA...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458412.2
3UTR-3UTR TCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATGGTATTCTTCTACACTaGTTTTTCATACAGGTGTGC +
Preference number: 2 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDGILLH*FFIQVC
Trigger: GCACACCTGTATGAAAAATCAGTGTAGAAGAATACC...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR TCA 90 bp TCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGGTAGGTATTCTTCTACACTaGTTTTTCATACAGGTGTGC +
Preference number: 2 (lower is better)
Translates to: SLLCGIQSKNYPRVRMRVGILLH*FFIQVC
Trigger: GCACACCTGTATGAAAAATCAGTGTAGAAGAATACC...TACCCTCATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR CCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGATTCATAAGCTGTCTTaGAGACACATGCCATTTGAG +
Preference number: 2 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSIHKLS*RHMPFE
Trigger: CTCAAATGGCATGTGTCTCCAAGACAGCTTATGAAT...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR CCA 90 bp TCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGGTAAATTCTAACTCAAGGTaGCCTATGAACTGGGTTCAT +
Preference number: 2 (lower is better)
Translates to: SLLCGIQSKNYPRVRMRVNSNSR*PMNWVH
Trigger: ATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATT...TACCCTCATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR CCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGAATTCTAACTCAAGGTaGCCTATGAACTGGGTTCAT +
Preference number: 2 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSNSNSR*PMNWVH
Trigger: ATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATT...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR-3UTR TCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGAGTATACACTCTACTTaGCCCAAGATGATAAAACTG +
Preference number: 2 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSSIHST*PKMIKL
Trigger: CAGTTTTATCATCTTGGGTCAAGTAGAGTGTATACT...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
3UTR TCA 72 bp ATAGGTTCCCAGGCATTAATGTGCCACCAAATATACTaGCTCCGCTTGTTTCAGGAAACAACCCAAATTAAG +
Preference number: 3 (lower is better)
Translates to: IGSQALMCHQIY*LRLFQETTQIK
Trigger: CTTAATTTGGGTTGTTTCCTGAAACAAGCGGAGTCAGTATATTTGGTGGCACATTAATGCCTGGGAACCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458412.2
CDS-3UTR CCA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCTCCCTGGGACAAGGATaGTGGGTGCCAAGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: GFTMLARMVLIFTSRSARSLGQG*WVPRPA
Trigger: GGCCGGCCTTGGCACCCACCATCCTTGTCCCAGGGA...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCGGGGCCTCAGCAATCTaGTGCCTCCTGCTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: GFTMLARMVLIFTSRSARGASAI*CLLLSR
Trigger: CCTTGACAGCAGGAGGCAGCAGATTGCTGAGGCCCC...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCTGCTGCCACTCTAGGTaGCCCTCTCTCACCGCATCC +
Preference number: 4 (lower is better)
Translates to: GFTMLARMVLIFTSRSARCCHSR*PSLTAS
Trigger: GGATGCGGTGAGAGAGGGCCACCTAGAGTGGCAGCA...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCTCTCTGACTGTCCAGTaGTCAGTGGCTCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GFTMLARMVLIFTSRSARSLTVQ*SVALGL
Trigger: CAGCCCCAGAGCCACTGAGCACTGGACAGTCAGAGA...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCCCAGCCTCCCCAAAGTaGTGGGGTTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: GFTMLARMVLIFTSRSARPASPK*WGYRHE
Trigger: CTCATGCCTGTAACCCCAGCACTTTGGGGAGGCTGG...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCCTCACCGCATCCACTTaGAGCCGCCTGTTCTACATC +
Preference number: 4 (lower is better)
Translates to: GFTMLARMVLIFTSRSARLTAST*SRLFYI
Trigger: GATGTAGAACAGGCGGCTGCAAGTGGATGCGGTGAG...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCGCCACTGTGCCTAGCTaGGGCCGTCACAGTTTTATA +
Preference number: 4 (lower is better)
Translates to: GFTMLARMVLIFTSRSARATVPS*GRHSFI
Trigger: TATAAAACTGTGACGGCCCCAGCTAGGCACAGTGGC...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR TCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATGACACACAGGGTAAGTaGGAGGGGGTCGGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNDTQGK*EGVGLS
Trigger: TGACAACCCGACCCCCTCTCACTTACCCTGTGTGTC...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATCCAGCCTCCCCAAAGTaGTGGGGTTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNPASPK*WGYRHE
Trigger: CTCATGCCTGTAACCCCAGCACTTTGGGGAGGCTGG...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATTTGCCCAGTCTGGAGTaGAGTGGCGCGATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNLPSLE*SGAISA
Trigger: AGCAGAGATCGCGCCACTGCACTCCAGACTGGGCAA...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTGGCGTTGAGCCACTGTaGCTAGCTGGGGCCGTCACA +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLGVEPL*LAGAVT
Trigger: TGTGACGGCCCCAGCTAGGCACAGTGGCTCAACGCC...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTAGCCTCCCGAGTAGCTaGGACTACAGGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLSLPSS*DYRRLP
Trigger: TGGCAGGCGCCTGTAGTCCCAGCTACTCGGGAGGCT...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR TCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATTCAAGGGTGGAGGTATaGAAGGAGGGTGCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNSRVEV*KEGAQD
Trigger: GTCTTGGGCACCCTCCTTTCATACCTCCACCCTTGA...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCGCCTGCTTAACAAGATaGTCCTCAGTCTGCACCTTT +
Preference number: 4 (lower is better)
Translates to: GFTMLARMVLIFTSRSARACLTR*SSVCTF
Trigger: AAAGGTGCAGACTGAGGAGCATCTTGTTAAGCAGGC...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATTCGCTGCCTTGCATCTaGTCTACTCCCAGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNSLPCI*STPRCA
Trigger: AGCACACCTGGGAGTAGAGCAGATGCAAGGCAGCGA...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCAGGCGCCCACCACCATaGCCAGCTAATTTTTCTATT +
Preference number: 4 (lower is better)
Translates to: GFTMLARMVLIFTSRSARRRPPP*PANFSI
Trigger: AATAGAAAAATTAGCTGGGCATGGTGGTGGGCGCCT...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATAGAGCAACCCCGCTCTaGCCTCCTACAAGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNRATPL*PPTSFC
Trigger: ACAGAAGCTTGTAGGAGGCCAGAGCGGGGTTGCTCT...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATCTGTGTTGCCCAAGCTaGTCTCAAACTGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNLCCPS*SQTAGL
Trigger: GAGCCCAGCAGTTTGAGACCAGCTTGGGCAACACAG...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTCTCTCCATCGCTCCTTaGATCCGCCTCAGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLLSIAP*IRLSGY
Trigger: GTACCCACTGAGGCGGATGCAAGGAGCGATGGAGAG...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATCTGCCCGGGACCGGGTaGTCAGCCCCAACACAGTGG +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHLPGTG*SAPTQW
Trigger: CCACTGTGTTGGGGCTGAGCACCCGGTCCCGGGCAG...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATCAGCTGCTCAGGAGGTaGAGGCAGAAGAATCACTTG +
Preference number: 4 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNQLLRR*RQKNHL
Trigger: CAAGTGATTCTTCTGCCTCCACCTCCTGAGCAGCTG...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATGTAGTGGAAAGGGTGTaGGGCAAGACACACAGGGTA +
Preference number: 4 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNVVERV*GKTHRV
Trigger: TACCCTGTGTGTCTTGCCCCACACCCTTTCCACTAC...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCGGGAAGGGGAAATTTTaGAATTCAACCTCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: GFTMLARMVLIFTSRSARGKGKF*NSTSWV
Trigger: AACCCAGGAGGTTGAATTCCAAAATTTCCCCTTCCC...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTGAGAGTGGCCGAAGCTaGGGAGGAAGACGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLESGRS*GGRRAE
Trigger: TTCTGCACGTCTTCCTCCCCAGCTTCGGCCACTCTC...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATCTGGGACAAGGATGGTaGGTGCCAAGGCCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDLGQGW*VPRPAP
Trigger: TGGGGCCGGCCTTGGCACCCACCATCCTTGTCCCAG...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR TCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATGAGTGGTCATACCCGTaGCAAGTAGGTACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNEWSYP*QVGTFP
Trigger: TGGAAAGGTACCTACTTGTCACGGGTATGACCACTC...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATGCCCTCGGGGTTGTGTaGCCACCTGTTTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDALGVV*PPVWPL
Trigger: GAGAGGCCAAACAGGTGGGCACACAACCCCGAGGGC...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATGACAGAAGCAACTGCTaGTCTCATCTGCCTTCCATC +
Preference number: 4 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNDRSNC*SHLPSI
Trigger: GATGGAAGGCAGATGAGAGCAGCAGTTGCTTCTGTC...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp TCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGGTACGGACGTCTCCATTCTaGCCGGGACCGGGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SLLCGIQSKNYPRVRMRVRTSPF*PGPGAQ
Trigger: CTGAGCACCCGGTCCCGGGCAGAATGGAGACGTCCG...TACCCTCATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATCAAGACAGGGAAGGATaGTCAGGACAATGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNQDREG*SGQCLG
Trigger: TCCCAGACATTGTCCTGACCATCCTTCCCTGTCTTG...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTGCACCTCCCTGGGCCTaGCACAGCAGCACAGCGGAG +
Preference number: 4 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFAPPWA*HSSTAE
Trigger: CTCCGCTGTGCTGCTGTGCCAGGCCCAGGGAGGTGC...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGAGGCGGGGCTGGCCCTaGGCCACACCTTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSRRGWP*ATPSFC
Trigger: GCAGAAAGAAGGTGTGGCCCAGGGCCAGCCCCGCCT...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTCTGTGTTGCCCAAGCTaGTCTCAAACTGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLLCCPS*SQTAGL
Trigger: GAGCCCAGCAGTTTGAGACCAGCTTGGGCAACACAG...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATGGGGTTTCACCATTTTaGCCAGGCTCGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNGVSPF*PGSSQT
Trigger: AGTTTGAGACGAGCCTGGCCAAAATGGTGAAACCCC...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR TCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTAGGCAGAGGTTGCAGTaGGCTGAAATCACACCACTG +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLRQRLQ*AEITPL
Trigger: CAGTGGTGTGATTTCAGCTCACTGCAACCTCTGCCT...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATTGCTGCAGGCTGTGTTaGTGGTCCACCTCCACTCCC +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDCCRLC*WSTSTP
Trigger: GGGAGTGGAGGTGGACCAGCAACACAGCCTGCAGCA...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGCCGCCACCTTCCACCTaGTGCAGGCTGTGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSPPPST*CRLCCW
Trigger: CCAGCAACACAGCCTGCAGCAGGTGGAAGGTGGCGG...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGGCTCCTTGTGCCAGCTaGTGCCACTCTAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSAPCAS*CHSRWP
Trigger: GGGCCACCTAGAGTGGCAGCAGCTGGCACAAGGAGC...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATGTGCTGCTGTGGGCCTaGTCCTTGTGCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHVLLWA*SLCQLL
Trigger: CAGCAGCTGGCACAAGGAGCAGGCCCACAGCAGCAC...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATCTCTACTCCCAGGTGTaGTGCTGTGGGCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDLYSQV*CCGPAP
Trigger: AGGAGCAGGCCCACAGCAGCACACCTGGGAGTAGAG...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTACTGCTGCTCTCATCTaGCTTCCATCTGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLTAALI*LPSGGP
Trigger: AGGTCCACCAGATGGAAGGCAGATGAGAGCAGCAGT...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATAGGCGCCCACCACCATaGCCAGCTAATTTTTCTATT +
Preference number: 4 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNRRPPP*PANFSI
Trigger: AATAGAAAAATTAGCTGGGCATGGTGGTGGGCGCCT...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTCCACAGACAGGCACATaGCACCATGCCTGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLPQTGT*HHAWLF
Trigger: AAAAAGCCAGGCATGGTGGCATGTGCCTGTCTGTGG...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATGGCGTTGAGCCACTGTaGCTAGCTGGGGCCGTCACA +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHGVEPL*LAGAVT
Trigger: TGTGACGGCCCCAGCTAGGCACAGTGGCTCAACGCC...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGGGCGTTGAGCCACTGTaGCTAGCTGGGGCCGTCACA +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSGVEPL*LAGAVT
Trigger: TGTGACGGCCCCAGCTAGGCACAGTGGCTCAACGCC...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTGTGGGCCAAGTAGGATaGCTAGTCACACCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLVGQVG*LVTPVF
Trigger: GAAGACTGGTGTGACTAGCCATCCTACTTGGCCCAC...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATGGCACGGCAGAGCACTaGTCCCACAGCTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHGTAEH*SHSFPL
Trigger: CAGTGGGAAGCTGTGGGACCAGTGCTCTGCCGTGCC...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATTGCAGGCTGTGTTGCTaGTCCACCTCCACTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDCRLCC*STSTPP
Trigger: TGGGGGAGTGGAGGTGGACCAGCAACACAGCCTGCA...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTCTATGTTGCCCAGGCTaGTCTGGAAATCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLLCCPG*SGNPDL
Trigger: CAGGTCAGGATTTCCAGACCAGCCTGGGCAACATAG...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGAGCCTCCCGAGTAGCTaGGACTACAGGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSSLPSS*DYRRLP
Trigger: TGGCAGGCGCCTGTAGTCCCAGCTACTCGGGAGGCT...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTACTCCCAGATCCAGATaGCCTCGGGGTTGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSTPRSR*PRGCVP
Trigger: GGGCACACAACCCCGAGGGCATCTGGATCTGGGAGT...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATCCTTGTGCCAGCTGCTaGCACTCTAGGTGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHPCASC*HSRWPS
Trigger: AGAGGGCCACCTAGAGTGGCAGCAGCTGGCACAAGG...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATGCTCACTGCAACCTCTaGTTTCCAATTTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNAHCNL*FPISSD
Trigger: ATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTGAGC...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATGTGATCTCAGCTCACTaGAACCTCTGCTTTCCAATT +
Preference number: 4 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNVISAH*NLCFPI
Trigger: AATTGGAAAGCAGAGGTTGCAGTGAGCTGAGATCAC...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATTTGCCCAGTCTGGAGTaGAGTGGCGCGATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDLPSLE*SGAISA
Trigger: AGCAGAGATCGCGCCACTGCACTCCAGACTGGGCAA...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTTTGCCCAGGCTAGAGTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSLPRLE*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCACTCTAGCCTGGGCAA...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTGTAAGGGACAGGACCTaGATTCTCCATGCTAAGACC +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLVRDRT*ILHAKT
Trigger: GGTCTTAGCATGGAGAATCCAGGTCCTGTCCCTTAC...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTCTGTCCAGTGCTCAGTaGCTCTGGGGCTGTGTACCG +
Preference number: 4 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSLSSAQ*LWGCVP
Trigger: CGGTACACAGCCCCAGAGCCACTGAGCACTGGACAG...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTGTGCGAAGGGGAGAGTaGCCGAAGCTGGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFVRRGE*PKLGRK
Trigger: CTTCCTCCCCAGCTTCGGCCACTCTCCCCTTCGCAC...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATTCAGCCCCAACACAGTaGCAGTCCAATGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDSAPTQ*QSNGLR
Trigger: CCTCAGCCCATTGGACTGCCACTGTGTTGGGGCTGA...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTCTCCAATCACAGACATaGCCGTCTCCAGATTGGAAC +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLLQSQT*PSPDWN
Trigger: GTTCCAATCTGGAGACGGCCATGTCTGTGATTGGAG...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406925.6
ENST00000442995.4
CDS-3UTR CCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTGGGGTTTCACCATTTTaGCCAGGCTCGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLGVSPF*PGSSQT
Trigger: AGTTTGAGACGAGCCTGGCCAAAATGGTGAAACCCC...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTAGCCTCCCGAGTAGCTaGGACTACAGGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFSLPSS*DYRRLP
Trigger: TGGCAGGCGCCTGTAGTCCCAGCTACTCGGGAGGCT...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR TCA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTGGCCTCCTACCTGGCTaGGGTATTTGGACCCCTGTG +
Preference number: 4 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFGLLPG*GIWTPV
Trigger: CACAGGGGTCCAAATACCTCAGCCAGGTAGGAGGCC...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR TCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTAGGCGGAGGTTGCAGTaGGCTGAGACCACACCATTG +
Preference number: 4 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSRRRLQ*AETTPL
Trigger: CAATGGTGTGGTCTCAGCTCACTGCAACCTCCGCCT...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTGTGCTTTTTGCTTGGTaGGTAAAGGTGTCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLVLFAW*VKVSRV
Trigger: CACCCTTGACACCTTTACGCACCAAGCAAAAAGCAC...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTTACTCCCAGGTGTGCTaGTGTGGGCCTGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSYSQVC*CGPAPC
Trigger: ACAAGGAGCAGGCCCACAGCAGCACACCTGGGAGTA...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTCCAGCCTCCCCAAAGTaGTGGGGTTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSPASPK*WGYRHE
Trigger: CTCATGCCTGTAACCCCAGCACTTTGGGGAGGCTGG...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGTTGCCCAGTCTGGAGTaGAGTGGCGCGATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSLPSLE*SGAISA
Trigger: AGCAGAGATCGCGCCACTGCACTCCAGACTGGGCAA...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTTTGCCCAGGCTAGAGTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFLPRLE*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCACTCTAGCCTGGGCAA...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATGAGGCCTCCTACCTaGCTGAGGTATTTGGACCCC +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDMRPPT*LRYLDP
Trigger: GGGGTCCAAATACCTCAGCCAGGTAGGAGGCCTCAT...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTATCCCCACCAAAGGATaGGGAGACAGAAGTACAAGT +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLIPTKG*GDRSTS
Trigger: ACTTGTACTTCTGTCTCCCCATCCTTTGGTGGGGAT...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATCTACATGGAAAGGGCTaGGCAAAAGGCACGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDLHGKG*AKGTAE
Trigger: CTCTGCCGTGCCTTTTGCCCAGCCCTTTCCATGTAG...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTAGCATGGCATTACATTaGCATCTGTGGAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLSMALH*HLWRLC
Trigger: GCAAAGCCTCCACAGATGCCAATGTAATGCCATGCT...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTCCTCTAATGTCGTTCTaGTTCGTTGCCCCAGGTATA +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLPLMSF*FVAPGI
Trigger: TATACCTGGGGCAACGAACCAGAACGACATTAGAGG...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp ATCATGTTACATAGGTTCCCAGGCATTAATGTGCCACCAAATATACTGACTCCGAGCCTCCCTAGTAGCTaGAATTACAGGCGTCCACCA +
Preference number: 4 (lower is better)
Translates to: IMLHRFPGINVPPNILTPSLPSS*NYRRPP
Trigger: TGGTGGACGCCTGTAATTCCAGCTACTAGGGAGGCT...CGGAGTCAGTATATTTGGTGGCACATTAATGCCTGGGAACCTATGTAACATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458412.2
CDS-3UTR TCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATTGTGCCTGCCTGGCCTaGGTAAAATGGAACCCCAAA +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDCACLA*VKWNPK
Trigger: TTTGGGGTTCCATTTTACTCAGGCCAGGCAGGCACA...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR TCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATGAGGTTGCAGTGAGCTaGGACCACACCATTGCACTC +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHEVAVS*DHTIAL
Trigger: GAGTGCAATGGTGTGGTCTCAGCTCACTGCAACCTC...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR TCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGGAGGTGGGTGGATCATaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSEVGGS*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCATGATCCACCCACCTC...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR TCA 90 bp TCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGGTAGGGGCAGGAGACAAATaGGTGGTCATACCCGTGACA +
Preference number: 4 (lower is better)
Translates to: SLLCGIQSKNYPRVRMRVGAGDK*VVIPVT
Trigger: TGTCACGGGTATGACCACTCATTTGTCTCCTGCCCC...TACCCTCATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTCCAAGAGGCGGAGGTTaGAGTGAGCTGAGACCACAC +
Preference number: 4 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFPRGGG*SELRPH
Trigger: GTGTGGTCTCAGCTCACTGCAACCTCCGCCTCTTGG...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTTCCTACTGCAGTTGGTaGTTATTACAGCTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLSYCSW*LLQLLP
Trigger: GGGCAAAAGCTGTAATAAGCACCAACTGCAGTAGGA...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTGTAGGTACCTTTCCATaGATTATGACTTGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLVGTFP*IMTCPA
Trigger: GGCAGGACAAGTCATAATGCATGGAAAGGTACCTAC...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGGCCTCAGCAATCTGCTaGCTCCTGCTGTCAAGGACA +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSASAIC*LLLSRT
Trigger: TGTCCTTGACAGCAGGAGGCAGCAGATTGCTGAGGC...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATTGTCTTGGAGACACATaGCATTTGAGTACAGTAACT +
Preference number: 4 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNCLGDT*HLSTVT
Trigger: AGTTACTGTACTCAAATGGCATGTGTCTCCAAGACA...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTGCTCACTGCAACCTCTaGTTTCCAATTTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLAHCNL*FPISSD
Trigger: ATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTGAGC...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGACAGCATGGCAGGTGTaGGAGCTGTGCTCCTATTCC +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSTAWQV*ELCSYS
Trigger: GGAATAGGAGCACAGCTCCCACACCTGCCATGCTGT...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTCCTCTCATTTGGGATTaGTTCCTCCTTAGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLPLIWD*FLLSCL
Trigger: GAGACAACTAAGGAGGAACCAATCCCAAATGAGAGG...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATACATCCTCCTCCATGTaGGGGCCTCAGCAATCTGCT +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHTSSSM*GPQQSA
Trigger: AGCAGATTGCTGAGGCCCCCACATGGAGGAGGATGT...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGCCTAAGCCTAATCCCTaGGACAAGGATGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSPKPNP*DKDGGC
Trigger: GCACCCACCATCCTTGTCCCAGGGATTAGGCTTAGG...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATCTGTGTTGCCCAAGCTaGTCTCAAACTGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHLCCPS*SQTAGL
Trigger: GAGCCCAGCAGTTTGAGACCAGCTTGGGCAACACAG...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATAGCCTCCCTAGTAGCTaGAATTACAGGCGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDSLPSS*NYRRPP
Trigger: TGGTGGACGCCTGTAATTCCAGCTACTAGGGAGGCT...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTGGTATGAAAGGAGGGTaGCCAAGACAGGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSGMKGG*PRQGRM
Trigger: CATCCTTCCCTGTCTTGGGCACCCTCCTTTCATACC...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGAGATGCTCCTCAGTCTaGACCTTTGCTTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSRCSSV*TFASVA
Trigger: GGCCACAGAAGCAAAGGTGCAGACTGAGGAGCATCT...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTACCCAGCTGGCTGCCTaGTTAACAAGATGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSTQLAA*LTRCSS
Trigger: TGAGGAGCATCTTGTTAAGCAGGCAGCCAGCTGGGT...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGACACACCCAGCTGGCTaGCTGCTTAACAAGATGCTC +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSTHPAG*LLNKML
Trigger: GAGCATCTTGTTAAGCAGGCAGCCAGCTGGGTGTGT...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTCCGGGAGGCAGAGGTTaGAGTGAGCTGAAATCACAC +
Preference number: 4 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFPGGRG*SELKSH
Trigger: GTGTGATTTCAGCTCACTGCAACCTCTGCCTCCCGG...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTACCTGTAATCCCAGCTaGTCAGGAGGTGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFTCNPS*SGGGGR
Trigger: TCTGCCTCCACCTCCTGAGCAGCTGGGATTACAGGT...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTGCCCGCGGGCACAGCTaGATAATAGGTTTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSARGHS*IIGLCV
Trigger: TACACACAAACCTATTATGCAGCTGTGCCCGCGGGC...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATTGTGTACCGAGTATGTaGAGGAACCGCCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHCVPSM*RNRHLP
Trigger: TGGAAGGTGGCGGTTCCTGCACATACTCGGTACACA...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATAAGTCTCCACCTCGCTaGCTTGCATCTGCTCTACTC +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHKSPPR*LASALL
Trigger: GAGTAGAGCAGATGCAAGGCAGCGAGGTGGAGACTT...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATGAGGACAGAAGCAACTaGTGCTCTCATCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHEDRSN*CSHLPS
Trigger: GGAAGGCAGATGAGAGCAGCAGTTGCTTCTGTCCTC...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGCCACAGACAGGCACATaGCACCATGCCTGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSPQTGT*HHAWLF
Trigger: AAAAAGCCAGGCATGGTGGCATGTGCCTGTCTGTGG...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATTTGCATCCGCCTCAGTaGGTACATGTCCTACAGCAT +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDLHPPQ*VHVLQH
Trigger: ATGCTGTAGGACATGTACCCACTGAGGCGGATGCAA...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp TCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGGTACTCCTAACCAGCTTCTaGCTCCTCAAGCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: SLLCGIQSKNYPRVRMRVLLTSF*LLKLLF
Trigger: GAACAGCAGCTTGAGGAGCCAGAAGCTGGTTAGGAG...TACCCTCATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATTTTGTGTGTACTTTCTaGGTGGGGAGGGGACAGAGG +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHFVCTF*VGRGQR
Trigger: CCTCTGTCCCCTCCCCACCCAGAAAGTACACACAAA...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTAGTGCTCAGTGGCTCTaGGGCTGTGTACCGAGTATG +
Preference number: 4 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFSAQWL*GCVPSM
Trigger: CATACTCGGTACACAGCCCCAGAGCCACTGAGCACT...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp TCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGGTAACAGTGGCAGTCCAATaGGCTGAGGACAGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: SLLCGIQSKNYPRVRMRVTVAVQ*AEDRSN
Trigger: GTTGCTTCTGTCCTCAGCCCATTGGACTGCCACTGT...TACCCTCATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATAGCCTCCAGAATAGCTaGGATTATAGGCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHSLQNS*DYRRPP
Trigger: TGGTGGGCGCCTATAATCCCAGCTATTCTGGAGGCT...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATCTATGTTGCCCAGGCTaGTCTGGAAATCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHLCCPG*SGNPDL
Trigger: CAGGTCAGGATTTCCAGACCAGCCTGGGCAACATAG...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTCTATGTTGCCCAGGCTaGTCTGGAAATCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSLCCPG*SGNPDL
Trigger: CAGGTCAGGATTTCCAGACCAGCCTGGGCAACATAG...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATAGCCTCCCTAGTAGCTaGAATTACAGGCGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHSLPSS*NYRRPP
Trigger: TGGTGGACGCCTGTAATTCCAGCTACTAGGGAGGCT...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATGCCACTGTGCCTAGCTaGGGCCGTCACAGTTTTATA +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHATVPS*GRHSFI
Trigger: TATAAAACTGTGACGGCCCCAGCTAGGCACAGTGGC...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGCACTGGTGCCCATCTTaGAGCATGGCATTACATTGG +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSHWCPS*SMALHW
Trigger: CCAATGTAATGCCATGCTGCAAGATGGGCACCAGTG...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATACATTTTTCCACTGGTaGCCATCTTGCAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDTFFHW*PSCSMA
Trigger: TGCCATGCTGCAAGATGGGCACCAGTGGAAAAATGT...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTGCCACACCTTCTTTCTaGTCCAGTTCTAGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSATPSF*SSSRSA
Trigger: TGCGCTTCTAGAACTGGAGCAGAAAGAAGGTGTGGC...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTTCAAGCGATTCCTaGCTCAGCCTCCAGAATAGC +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDISSDS*LSLQNS
Trigger: GCTATTCTGGAGGCTGAGGCAGGAATCGCTTGAAAT...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTCCACAGACAGGCACATaGCACCATGCCTGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFPQTGT*HHAWLF
Trigger: AAAAAGCCAGGCATGGTGGCATGTGCCTGTCTGTGG...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTAGAATTCTAAATCTTTaGTGGAAAAGGGCACAGGGA +
Preference number: 4 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLRILNL*WKRAQG
Trigger: TCCCTGTGCCCTTTTCCACCAAAGATTTAGAATTCT...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATGCCCATCTTGCAGCATaGCATTACATTGGCATCTGT +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDAHLAA*HYIGIC
Trigger: ACAGATGCCAATGTAATGCCATGCTGCAAGATGGGC...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATCAACCCCCTCTCATTTaGGATTGGTTCCTCCTTAGT +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDQPPLI*DWFLLS
Trigger: ACTAAGGAGGAACCAATCCCAAATGAGAGGGGGTTG...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATAGAAAAGGTTTCGGTTaGGGGCAGGAGACAAATGAG +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDRKGFG*GQETNE
Trigger: CTCATTTGTCTCCTGCCCCCAACCGAAACCTTTTCT...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATCTACTAAGTTGTCAGTaGGCGGCAATCCCAAATGGC +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHLLSCQ*AAIPNG
Trigger: GCCATTTGGGATTGCCGCCCACTGACAACTTAGTAG...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGTCTAGAAGCGCAACCTaGAGGTCAGTGTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSSRSAT*RSVFSS
Trigger: GGAAGAGAACACTGACCTCCAGGTTGCGCTTCTAGA...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATCTCCAATCACAGACATaGCCGTCTCCAGATTGGAAC +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHLQSQT*PSPDWN
Trigger: GTTCCAATCTGGAGACGGCCATGTCTGTGATTGGAG...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406925.6
ENST00000442995.4
CDS-3UTR CCA 90 bp TCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGGTACTGGTCTCAAACTGCTaGGCTCAAGTGATCGTCTTG +
Preference number: 4 (lower is better)
Translates to: SLLCGIQSKNYPRVRMRVLVSNC*AQVIVL
Trigger: CAAGACGATCACTTGAGCCCAGCAGTTTGAGACCAG...TACCCTCATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR TCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATAGAGCAAGACTAGAGTaGGAAAAGCTCCCCACAAAC +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHRARLE*EKLPTN
Trigger: GTTTGTGGGGAGCTTTTCTCACTCTAGTCTTGCTCT...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATTGCTTGTGTGCTTTTTaGTTGGTGCGTAAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDCLCAF*LVRKGV
Trigger: GACACCTTTACGCACCAAGCAAAAAGCACACAAGCA...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTGAATTTGGAATAAGGTaGAGTAGGCCTGTCCCAACC +
Preference number: 4 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSEFGIR*SRPVPT
Trigger: GGTTGGGACAGGCCTACTGCACCTTATTCCAAATTC...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTTGCTTCTCGTGTACTTaGTGTGTAACCTTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSCFSCT*CVTLSQ
Trigger: CTGGCTCAAGGTTACACAGCAAGTACACGAGAAGCA...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGAGGCGCCCACCACCATaGCCAGCTAATTTTTCTATT +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSRRPPP*PANFSI
Trigger: AATAGAAAAATTAGCTGGGCATGGTGGTGGGCGCCT...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp TCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGGTAATTTCAAGCGATTCCTaGCTCAGCCTCCAGAATAGC +
Preference number: 4 (lower is better)
Translates to: SLLCGIQSKNYPRVRMRVISSDS*LSLQNS
Trigger: GCTATTCTGGAGGCTGAGGCAGGAATCGCTTGAAAT...TACCCTCATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATGTGATCTCAGCTCACTaGAACCTCTGCTTTCCAATT +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDVISAH*NLCFPI
Trigger: AATTGGAAAGCAGAGGTTGCAGTGAGCTGAGATCAC...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATGAAATCTCACTGTGTTaGCCAAGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDEISLC*PSWSQT
Trigger: AGTTTGAGACCAGCTTGGGCAACACAGTGAGATTTC...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATAGGGTTTCACCATGTTaGCCAGGCTTGTCTTCAACT +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHRVSPC*PGLSST
Trigger: AGTTGAAGACAAGCCTGGCCAACATGGTGAAACCCT...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp TCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGGTAAGGGTTTCACCATGTTaGCCAGGCTTGTCTTCAACT +
Preference number: 4 (lower is better)
Translates to: SLLCGIQSKNYPRVRMRVRVSPC*PGLSST
Trigger: AGTTGAAGACAAGCCTGGCCAACATGGTGAAACCCT...TACCCTCATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTCTGGTCTCAAACTGCTaGGCTCAAGTGATCGTCTTG +
Preference number: 4 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFLVSNC*AQVIVL
Trigger: CAAGACGATCACTTGAGCCCAGCAGTTTGAGACCAG...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR TCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATAGTATGGTACCCTTTTaGGGATTACCAGTATGGACC +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHSMVPF*GLPVWT
Trigger: GGTCCATACTGGTAATCCTCAAAAGGGTACCATACT...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR TCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGCCTTTCCATGCATTATaGCTTGTCCTGCCATTTCTC +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSPFHAL*LVLPFL
Trigger: GAGAAATGGCAGGACAAGTCATAATGCATGGAAAGG...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR TCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATTGCCACCAAATATACTaGCTCCGCTTGTTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHCHQIY*LRLFQE
Trigger: TTCCTGAAACAAGCGGAGTCAGTATATTTGGTGGCA...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458412.2
CDS-3UTR GCA 90 bp TCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGGTACAGGTGTGGGAGCTGTaGTCCTATTCCACTATTATA +
Preference number: 4 (lower is better)
Translates to: SLLCGIQSKNYPRVRMRVQVWEL*SYSTII
Trigger: TATAATAGTGGAATAGGAGCACAGCTCCCACACCTG...TACCCTCATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp TCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGGTACATCTGTGGAGGCTTTaGATTCATCCTACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SLLCGIQSKNYPRVRMRVHLWRL*IHPTAV
Trigger: AACTGCAGTAGGATGAATGCAAAGCCTCCACAGATG...TACCCTCATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTTGTGCTATTGCCTTCTaGATTCCTGATGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSCAIAF*IPDEHL
Trigger: GAGATGCTCATCAGGAATGCAGAAGGCAATAGCACA...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTCCTGTTAGGTCTCTGTaGTATTGCCTTCTGCATTCC +
Preference number: 4 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFPVRSL*YCLLHS
Trigger: GGAATGCAGAAGGCAATAGCACAGAGACCTAACAGG...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTGTGATCTCAGCTCACTaGAACCTCTGCTTTCCAATT +
Preference number: 4 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSVISAH*NLCFPI
Trigger: AATTGGAAAGCAGAGGTTGCAGTGAGCTGAGATCAC...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp TCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGGTAGAAATCTCACTGTGTTaGCCAAGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: SLLCGIQSKNYPRVRMRVEISLC*PSWSQT
Trigger: AGTTTGAGACCAGCTTGGGCAACACAGTGAGATTTC...TACCCTCATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGGTATTTGGACCCCTGTaGATTGTCAAGGTTTACAGC +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSVFGPL*IVKVYS
Trigger: GCTGTAAACCTTGACAATCCACAGGGGTCCAAATAC...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTAGGGCACAGGGAGTATaGTACCCTTTTGAGGATTAC +
Preference number: 4 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFRAQGV*YPFEDY
Trigger: GTAATCCTCAAAAGGGTACCATACTCCCTGTGCCCT...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGTGTGTGCTTTTTGCTTaGTGCGTAAAGGTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSCVLFA*CVKVSR
Trigger: CCTTGACACCTTTACGCACCAAGCAAAAAGCACACA...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGGGTCGGGTTGTCAGGTaGGAAGAGATAAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSGRVVR*EEIKGK
Trigger: TTTTCCTTTTATCTCTTCCCACCTGACAACCCGACC...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTAGGGTTTCACCATGTTaGCCAGGCTTGTCTTCAACT +
Preference number: 4 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFRVSPC*PGLSST
Trigger: AGTTGAAGACAAGCCTGGCCAACATGGTGAAACCCT...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATCCAATTGGTAGTAAATaGCCCCAGATAATCCCTATT +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDPIGSK*PQIIPI
Trigger: AATAGGGATTATCTGGGGGCATTTACTACCAATTGG...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATGCTTATTACAGCTTTTaGCCATTCCTGGAACAAGAA +
Preference number: 4 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDAYYSF*PFLEQE
Trigger: TTCTTGTTCCAGGAATGGGCAAAAGCTGTAATAAGC...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATTCTAGTATTACTACATaGAAAGGGCTGGGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHSSITT*KGLGKR
Trigger: CCTTTTGCCCAGCCCTTTCCATGTAGTAATACTAGA...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATTTACATTGGCATCTGTaGAGGCTTTGCATTCATCCT +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHLHWHL*RLCIHP
Trigger: AGGATGAATGCAAAGCCTCCACAGATGCCAATGTAA...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTTGGAATTCAACCTCCTaGGTTAACCTCACACATACA +
Preference number: 4 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSWNSTS*VNLTHT
Trigger: TGTATGTGTGAGGTTAACCCAGGAGGTTGAATTCCA...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGAGGTGGCCTATGAACTaGGTTCATAACCTACATCTA +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSRWPMN*VHNLHL
Trigger: TAGATGTAGGTTATGAACCCAGTTCATAGGCCACCT...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp TCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGGTAAGGTGGCCTATGAACTaGGTTCATAACCTACATCTA +
Preference number: 4 (lower is better)
Translates to: SLLCGIQSKNYPRVRMRVRWPMN*VHNLHL
Trigger: TAGATGTAGGTTATGAACCCAGTTCATAGGCCACCT...TACCCTCATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR TCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGCAAGGTTTACAGCTATaGGTTTCAGGTGAGGATAAA +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSQGLQL*VSGEDK
Trigger: TTTATCCTCACCTGAAACTCATAGCTGTAAACCTTG...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTTTGCATTCATCCTACTaGAGTTGGTGCTTATTACAG +
Preference number: 4 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSLHSSY*SWCLLQ
Trigger: CTGTAATAAGCACCAACTGCAGTAGGATGAATGCAA...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGACATACATTAACGTATaGCTTTCCTCAGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSTYINV*LSSASL
Trigger: GAGACTTGCTGAGGAAAGGCATACGTTAATGTATGT...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR GCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTTGTCTTGGAGACACATaGCATTTGAGTACAGTAACT +
Preference number: 4 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSCLGDT*HLSTVT
Trigger: AGTTACTGTACTCAAATGGCATGTGTCTCCAAGACA...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATTGTCTTGGAGACACATaGCATTTGAGTACAGTAACT +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHCLGDT*HLSTVT
Trigger: AGTTACTGTACTCAAATGGCATGTGTCTCCAAGACA...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATATTCTAAATCTTTGGTaGAAAAGGGCACAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHILNLW*KRAQGV
Trigger: TACTCCCTGTGCCCTTTTCCACCAAAGATTTAGAAT...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTGCAATCCCAAATGGCTaGAATCAGCTTGAAACAGAA +
Preference number: 4 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFAIPNG*NQLETE
Trigger: TTCTGTTTCAAGCTGATTCCAGCCATTTGGGATTGC...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp TCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGGTAATTCATAAGCTGTCTTaGAGACACATGCCATTTGAG +
Preference number: 4 (lower is better)
Translates to: SLLCGIQSKNYPRVRMRVIHKLS*RHMPFE
Trigger: CTCAAATGGCATGTGTCTCCAAGACAGCTTATGAAT...TACCCTCATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTATTCATAAGCTGTCTTaGAGACACATGCCATTTGAG +
Preference number: 4 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSIHKLS*RHMPFE
Trigger: CTCAAATGGCATGTGTCTCCAAGACAGCTTATGAAT...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATAATTCTAACTCAAGGTaGCCTATGAACTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHNSNSR*PMNWVH
Trigger: ATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATT...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CCA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTAATTCTAACTCAAGGTaGCCTATGAACTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSNSNSR*PMNWVH
Trigger: ATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATT...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR GCA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTGCTTCTGTCATCAGCTaGTATATCATGTATCTGACT +
Preference number: 4 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFASVIS*YIMYLT
Trigger: AGTCAGATACATGATATAGCAGCTGATGACAGAAGC...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CCA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTAATTCTAACTCAAGGTaGCCTATGAACTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFNSNSR*PMNWVH
Trigger: ATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATT...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS GCA 90 bp CTGGGGCTGTGTACCGAGTATGTGCAGGAACCGCCACCTTCCACCTaGTGCAGGCTGTGTTGCTGGTCCACCTCCACTCCCCCACCAGCC +
Preference number: 5 (lower is better)
Translates to: LGLCTEYVQEPPPST*CRLCCWSTSTPPPA
Trigger: GGCTGGTGGGGGAGTGGAGGTGGACCAGCAACACAGCCTGCAGCAGGTGGAAGGTGGCGGTTCCTGCACATACTCGGTACACAGCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS GCA 90 bp CCTCGGGGTTGTGTGCCCACCTGTTTGGCCTCTCTGACTGTCCAGTaGTCAGTGGCTCTGGGGCTGTGTACCGAGTATGTGCAGGAACCG +
Preference number: 5 (lower is better)
Translates to: PRGCVPTCLASLTVQ*SVALGLCTEYVQEP
Trigger: CGGTTCCTGCACATACTCGGTACACAGCCCCAGAGCCACTGAGCACTGGACAGTCAGAGAGGCCAAACAGGTGGGCACACAACCCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS GCA 90 bp CGCCTGTTCTACATCCTCCTCCATGTGGGGGCCTCAGCAATCTGCTaGCTCCTGCTGTCAAGGACAGTAGTGGAAAGGGTGTGGGGCAAG +
Preference number: 5 (lower is better)
Translates to: RLFYILLHVGASAIC*LLLSRTVVERVWGK
Trigger: CTTGCCCCACACCCTTTCCACTACTGTCCTTGACAGCAGGAGGCAGCAGATTGCTGAGGCCCCCACATGGAGGAGGATGTAGAACAGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CCA 90 bp GCAATCTGCTGCCTCCTGCTGTCAAGGACAGTAGTGGAAAGGGTGTaGGGCAAGACACACAGGGTAAGTGAGAGGGGGTCGGGTTGTCAG +
Preference number: 5 (lower is better)
Translates to: AICCLLLSRTVVERV*GKTHRVSERGSGCQ
Trigger: CTGACAACCCGACCCCCTCTCACTTACCCTGTGTGTCTTGCCCCACACCCTTTCCACTACTGTCCTTGACAGCAGGAGGCAGCAGATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CCA 90 bp CCACTTTCCACCCTTAGGCAGACAGGTGCAGCTCAAGACTGTAGCTaGTTCCTGGCTGTCCTGCTGGCCACCCTAGGATTCTACAGCATG +
Preference number: 5 (lower is better)
Translates to: PLSTLRQTGAAQDCS*FLAVLLATLGFYSM
Trigger: CATGCTGTAGAATCCTAGGGTGGCCAGCAGGACAGCCAGGAACCAGCTACAGTCTTGAGCTGCACCTGTCTGCCTAAGGGTGGAAAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS GCA 90 bp ATGACTTGTCCTGCCATTTCTCTCACACACACTCCCAGATCCAGATaGCCTCGGGGTTGTGTGCCCACCTGTTTGGCCTCTCTGACTGTC +
Preference number: 5 (lower is better)
Translates to: MTCPAISLTHTPRSR*PRGCVPTCLASLTV
Trigger: GACAGTCAGAGAGGCCAAACAGGTGGGCACACAACCCCGAGGGCATCTGGATCTGGGAGTGTGTGTGAGAGAAATGGCAGGACAAGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp CACTGCAACCTCTGCTTTCCAATTTCAAGCGATTCCTGCCTCAGCCTCCAGAATCTGCTGCAGGCTGTGTaGCTGGTCCACCTCCACTCC +
Preference number: 5 (lower is better)
Translates to: HCNLCFPISSDSCLSLQNLLQAV*LVHLHS
Trigger: GGAGTGGAGGTGGACCAGCAACACAGCCTGCAGCAG...ATTCTGGAGGCTGAGGCAGGAATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCGCTCAAGTGATCGTCTaGCCTCAGCTTCCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: GFTMLARMVLIFTSRSARAQVIV*PQLPKV
Trigger: CACCTTGGGAAGCTGAGGCAAGACGATCACTTGAGC...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CAA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCGAAAGCACGCATCAGTaGGTTAGGGCAATAAGCGCC +
Preference number: 5 (lower is better)
Translates to: GFTMLARMVLIFTSRSARESTHQ*VRAISA
Trigger: GGCGCTTATTGCCCTAACCAACTGATGCGTGCTTTC...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CAA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCTGGGGTTTCACCATTTaGGCCAGGCTCGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: GFTMLARMVLIFTSRSARWGFTI*ARLVSN
Trigger: GTTTGAGACGAGCCTGGCCAAAATGGTGAAACCCCA...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS GCA 90 bp CCAGAGCAACCCCGCTCTGGCCTCCTACAAGCTTCTGTCATCAGCTaGTATATCATGTATCTGACTTTCTCTGCACTGTCCAGCCGTCCT +
Preference number: 5 (lower is better)
Translates to: PEQPRSGLLQASVIS*YIMYLTFSALSSRP
Trigger: AGGACGGCTGGACAGTGCAGAGAAAGTCAGATACATGATATAGCAGCTGATGACAGAAGCTTGTAGGAGGCCAGAGCGGGGTTGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS GCA 90 bp GAGCTGTGCTCCTATTCCACTATTATACACACCCAGCTGGCTGCCTaGTTAACAAGATGCTCCTCAGTCTGCACCTTTGCTTCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: ELCSYSTIIHTQLAA*LTRCSSVCTFASVA
Trigger: GGCCACAGAAGCAAAGGTGCAGACTGAGGAGCATCTTGTTAAGCAGGCAGCCAGCTGGGTGTGTATAATAGTGGAATAGGAGCACAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS GCA 90 bp CTCCTCAAGCTGCTGTTCCTGTTAGGTCTCTGTGCTATTGCCTTCTaGATTCCTGATGAGCATCTCTTCCCAGGTACTCTCCCTCCCACA +
Preference number: 5 (lower is better)
Translates to: LLKLLFLLGLCAIAF*IPDEHLFPGTLPPT
Trigger: TGTGGGAGGGAGAGTACCTGGGAAGAGATGCTCATCAGGAATGCAGAAGGCAATAGCACAGAGACCTAACAGGAACAGCAGCTTGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCTACCCATCTCTTCTGTaGTCCCTTCCCAGTAATCCT +
Preference number: 5 (lower is better)
Translates to: GFTMLARMVLIFTSRSARYPSLL*SLPSNP
Trigger: AGGATTACTGGGAAGGGACAACAGAAGAGATGGGTA...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCACTTGCTGTGTAACCTaGAGCCAGACTTTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: GFTMLARMVLIFTSRSARTCCVT*SQTLCF
Trigger: GAAGCACAAAGTCTGGCTCAAGGTTACACAGCAAGT...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS GCA 90 bp GTGGGAGCTGTGCTCCTATTCCACTATTATACACACCCAGCTGGCTaGCTGCTTAACAAGATGCTCCTCAGTCTGCACCTTTGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: VGAVLLFHYYTHPAG*LLNKMLLSLHLCFC
Trigger: ACAGAAGCAAAGGTGCAGACTGAGGAGCATCTTGTTAAGCAGGCAGCCAGCTGGGTGTGTATAATAGTGGAATAGGAGCACAGCTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTAAAGAGACGGCTCTGTaGCCCAGGCTAGAGTGCCTC +
Preference number: 5 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLKETAL*PRLECL
Trigger: GAGGCACTCTAGCCTGGGCAACAGAGCCGTCTCTTT...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CAA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCGTCTGTAATTGCCATTaGAGTGTCCTTACAGCAGAC +
Preference number: 5 (lower is better)
Translates to: GFTMLARMVLIFTSRSARVCNCH*SVLTAD
Trigger: GTCTGCTGTAAGGACACTCAAATGGCAATTACAGAC...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS GCA 90 bp TGTTGTCCCTTCCCAGTAATCCTTCAAGGACAGAATCACACCCTGTaGCTGCCTGGCCTGAGTAAAATGGAACCCCAAACACCAGATATC +
Preference number: 5 (lower is better)
Translates to: CCPFPVILQGQNHTL*LPGLSKMEPQTPDI
Trigger: GATATCTGGTGTTTGGGGTTCCATTTTACTCAGGCCAGGCAGGCACAGGGTGTGATTCTGTCCTTGAAGGATTACTGGGAAGGGACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CCA 90 bp CTCAGCAATGAGGCCTCCTACCTGGCTGAGGTATTTGGACCCCTGTaGATTGTCAAGGTTTACAGCTATGAGTTTCAGGTGAGGATAAAG +
Preference number: 5 (lower is better)
Translates to: LSNEASYLAEVFGPL*IVKVYSYEFQVRIK
Trigger: CTTTATCCTCACCTGAAACTCATAGCTGTAAACCTTGACAATCCACAGGGGTCCAAATACCTCAGCCAGGTAGGAGGCCTCATTGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATCAGATGCCCTCGGGGTaGTGTGCCCACCTGTTTGGC +
Preference number: 5 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHQMPSG*CAHLFG
Trigger: GCCAAACAGGTGGGCACACAACCCCGAGGGCATCTG...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTTGGGGTTTCACCATTTaGGCCAGGCTCGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLWGFTI*ARLVSN
Trigger: GTTTGAGACGAGCCTGGCCAAAATGGTGAAACCCCA...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS TCA 90 bp AAAGGTTTCGGTTGGGGGCAGGAGACAAATGAGTGGTCATACCCGTaGCAAGTAGGTACCTTTCCATGCATTATGACTTGTCCTGCCATT +
Preference number: 5 (lower is better)
Translates to: KGFGWGQETNEWSYP*QVGTFPCIMTCPAI
Trigger: AATGGCAGGACAAGTCATAATGCATGGAAAGGTACCTACTTGTCACGGGTATGACCACTCATTTGTCTCCTGCCCCCAACCGAAACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS GCA 90 bp TGCCCATCTTGCAGCATGGCATTACATTGGCATCTGTGGAGGCTTTaGATTCATCCTACTGCAGTTGGTGCTTATTACAGCTTTTGCCCA +
Preference number: 5 (lower is better)
Translates to: CPSCSMALHWHLWRL*IHPTAVGAYYSFCP
Trigger: TGGGCAAAAGCTGTAATAAGCACCAACTGCAGTAGGATGAATGCAAAGCCTCCACAGATGCCAATGTAATGCCATGCTGCAAGATGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CCA 90 bp CAGCAGGTGTTGCCAGGAGGCCTTCTGCTAACAAGAGTAAAGTTGTaGCGCCTAGATCTGCAGGAATTGGTGATAAATTTGAAGAACGGT +
Preference number: 5 (lower is better)
Translates to: QQVLPGGLLLTRVKL*RLDLQELVINLKNG
Trigger: ACCGTTCTTCAAATTTATCACCAATTCCTGCAGATCTAGGCGCCACAACTTTACTCTTGTTAGCAGAAGGCCTCCTGGCAACACCTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498605.1
CDS-3UTR CAA 90 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTTCACTTCGCGATCCGCCCGCCAAATACCTAGCTCATaGTTAATACCCATCTCTTCT +
Preference number: 5 (lower is better)
Translates to: GFTMLARMVLIFTSRSARQIPSS*LIPISS
Trigger: AGAAGAGATGGGTATTAACAATGAGCTAGGTATTTG...GCGGGCGGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAACATGGTGAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp TCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGGTACCTCTCCATCGCTCCTaGCATCCGCCTCAGTGGGTA +
Preference number: 5 (lower is better)
Translates to: SLLCGIQSKNYPRVRMRVPLHRS*HPPQWV
Trigger: TACCCACTGAGGCGGATGCAAGGAGCGATGGAGAGG...TACCCTCATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTGCATCTGTGGAGGCTTaGCATTCATCCTACTGCAGT +
Preference number: 5 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLASVEA*HSSYCS
Trigger: ACTGCAGTAGGATGAATGCAAAGCCTCCACAGATGC...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTCTGCTTCTCGTGTACTaGCTGTGTAACCTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLLLLVY*LCNLEP
Trigger: TGGCTCAAGGTTACACAGCAAGTACACGAGAAGCAG...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGCTCCACCTCGCTGCCTaGCATCTGCTCTACTCCCAG +
Preference number: 5 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSLHLAA*HLLYSQ
Trigger: CTGGGAGTAGAGCAGATGCAAGGCAGCGAGGTGGAG...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTACTCTTCACTGTCCTTaGCCTTTTCTCCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLTLHCP*PFLLSL
Trigger: CAGACTCAGGAGAAAAGGCAAAGGACAGTGAAGAGT...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTTGTGTGCCCACCTGTTaGGCCTCTCTGACTGTCCAG +
Preference number: 5 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSCVPTC*ASLTVQ
Trigger: CTGGACAGTCAGAGAGGCCAAACAGGTGGGCACACA...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTGGAGACACATGCCATTaGAGTACAGTAACTCTGCTG +
Preference number: 5 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLGDTCH*STVTLL
Trigger: CAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CAA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATGCTCAAGTGATCGTCTaGCCTCAGCTTCCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDAQVIV*PQLPKV
Trigger: CACCTTGGGAAGCTGAGGCAAGACGATCACTTGAGC...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CAA 90 bp TCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGGTAAAAGAGACGGCTCTGTaGCCCAGGCTAGAGTGCCTC +
Preference number: 5 (lower is better)
Translates to: SLLCGIQSKNYPRVRMRVKETAL*PRLECL
Trigger: GAGGCACTCTAGCCTGGGCAACAGAGCCGTCTCTTT...TACCCTCATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CAA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATAAAGAGACGGCTCTGTaGCCCAGGCTAGAGTGCCTC +
Preference number: 5 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHKETAL*PRLECL
Trigger: GAGGCACTCTAGCCTGGGCAACAGAGCCGTCTCTTT...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS GCA 90 bp ACATTGGCATCTGTGGAGGCTTTGCATTCATCCTACTGCAGTTGGTaGTTATTACAGCTTTTGCCCATTCCTGGAACAAGAACTGGTAAG +
Preference number: 5 (lower is better)
Translates to: TLASVEALHSSYCSW*LLQLLPIPGTRTGK
Trigger: CTTACCAGTTCTTGTTCCAGGAATGGGCAAAAGCTGTAATAAGCACCAACTGCAGTAGGATGAATGCAAAGCCTCCACAGATGCCAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS GCA 90 bp CATGGCATTACATTGGCATCTGTGGAGGCTTTGCATTCATCCTACTaGAGTTGGTGCTTATTACAGCTTTTGCCCATTCCTGGAACAAGA +
Preference number: 5 (lower is better)
Translates to: HGITLASVEALHSSY*SWCLLQLLPIPGTR
Trigger: TCTTGTTCCAGGAATGGGCAAAAGCTGTAATAAGCACCAACTGCAGTAGGATGAATGCAAAGCCTCCACAGATGCCAATGTAATGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS GCA 90 bp GCCCAGATGCTATTAAGTATCTTTGAGTTAGAATTTGGAATAAGGTaGAGTAGGCCTGTCCCAACCCCCTCTCATTTGGGATTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: AQMLLSIFELEFGIR*SRPVPTPSHLGLVP
Trigger: AGGAACCAATCCCAAATGAGAGGGGGTTGGGACAGGCCTACTGCACCTTATTCCAAATTCTAACTCAAAGATACTTAATAGCATCTGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CCA 90 bp TGTAGACTAAAGCAATTATACTTACTCCCCAGAGCAACCCCGCTCTaGCCTCCTACAAGCTTCTGTCATCAGCTGCTATATCATGTATCT +
Preference number: 5 (lower is better)
Translates to: CRLKQLYLLPRATPL*PPTSFCHQLLYHVS
Trigger: AGATACATGATATAGCAGCTGATGACAGAAGCTTGTAGGAGGCCAGAGCGGGGTTGCTCTGGGGAGTAAGTATAATTGCTTTAGTCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATACCTGGCTGAGGTATTaGGACCCCTGTGGATTGTCA +
Preference number: 5 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDTWLRY*DPCGLS
Trigger: TGACAATCCACAGGGGTCCAAATACCTCAGCCAGGT...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGCCTCAGTCTGCACCTTaGCTTCTGTGGCCTCATCTC +
Preference number: 5 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSPQSAP*LLWPHL
Trigger: GAGATGAGGCCACAGAAGCAAAGGTGCAGACTGAGG...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATTCTCACCGCATCCACTaGCAGCCGCCTGTTCTACAT +
Preference number: 5 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHSHRIH*QPPVLH
Trigger: ATGTAGAACAGGCGGCTGCAAGTGGATGCGGTGAGA...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATGAAAGCCCTACTAAGTaGTCAGTGGGCGGCAATCCC +
Preference number: 5 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHESPTK*SVGGNP
Trigger: GGGATTGCCGCCCACTGACAACTTAGTAGGGCTTTC...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGGCTCAAGTGATCGTCTaGCCTCAGCTTCCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSAQVIV*PQLPKV
Trigger: CACCTTGGGAAGCTGAGGCAAGACGATCACTTGAGC...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CAA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTGTCTGTAATTGCCATTaGAGTGTCCTTACAGCAGAC +
Preference number: 5 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLVCNCH*SVLTAD
Trigger: GTCTGCTGTAAGGACACTCAAATGGCAATTACAGAC...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS CCA 90 bp ATTACATTGGCATCTGTGGAGGCTTTGCATTCATCCTACTGCAGTTaGTGCTTATTACAGCTTTTGCCCATTCCTGGAACAAGAACTGGT +
Preference number: 5 (lower is better)
Translates to: ITLASVEALHSSYCS*CLLQLLPIPGTRTG
Trigger: ACCAGTTCTTGTTCCAGGAATGGGCAAAAGCTGTAATAAGCACCAACTGCAGTAGGATGAATGCAAAGCCTCCACAGATGCCAATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATCAGCATGGCATTACATaGGCATCTGTGGAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDQHGIT*ASVEAL
Trigger: CAAAGCCTCCACAGATGCCAATGTAATGCCATGCTG...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATCCACTGGTGCCCATCTaGCAGCATGGCATTACATTG +
Preference number: 5 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHPLVPI*QHGITL
Trigger: CAATGTAATGCCATGCTGCAAGATGGGCACCAGTGG...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTGAAAGCACGCATCAGTaGGTTAGGGCAATAAGCGCC +
Preference number: 5 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSESTHQ*VRAISA
Trigger: GGCGCTTATTGCCCTAACCAACTGATGCGTGCTTTC...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CAA 90 bp GGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTAATGAGGGTAAGGCCTaGAAACTCTTGGAGAAATGT +
Preference number: 5 (lower is better)
Translates to: GDTCHLSTVTLLRLQMYLNEGKA*KLLEKC
Trigger: ACATTTCTCCAAGAGTTTCAAGGCCTTACCCTCATT...AAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CAA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGTTAGCCAGGATGGTCTaGATCTTCACTTCGCGATCC +
Preference number: 5 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSLARMV*IFTSRS
Trigger: GGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAA...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CAA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTTTAGCCAGGATGGTCTaGATCTTCACTTCGCGATCC +
Preference number: 5 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSLARMV*IFTSRS
Trigger: GGATCGCGAAGTGAAGATCAAGACCATCCTGGCTAA...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS TCA 90 bp AGAGGAGGGAAAGTAGACATAGGCTGGGTAAAGGAAATTCCGGGATaGAGTAATAGCACTGTAAAAAGACAGAAAACAGGTTTAAGTCCC +
Preference number: 5 (lower is better)
Translates to: RGGKVDIGWVKEIPG*SNSTVKRQKTGLSP
Trigger: GGGACTTAAACCTGTTTTCTGTCTTTTTACAGTGCTATTACTTCATCCCGGAATTTCCTTTACCCAGCCTATGTCTACTTTCCCTCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATACCAGTATGGACCAATaGGTAGTAAATGCCCCCAGA +
Preference number: 5 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHTSMDQ*VVNAPR
Trigger: TCTGGGGGCATTTACTACCAATTGGTCCATACTGGT...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp GTCTTCTCACATCCTTTAAATGTCCCACTGGAAGAATCAAATAGTTTAGTGTCGGGAGACACATGCCATTaGAGTACAGTAACTCTGCTG +
Preference number: 5 (lower is better)
Translates to: VFSHPLNVPLEESNSLVSGDTCH*STVTLL
Trigger: CAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC...CGACACTAAACTATTTGATTCTTCCAGTGGGACATTTAAAGGATGTGAGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CAA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATGGAGACACATGCCATTaGAGTACAGTAACTCTGCTG +
Preference number: 5 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHGDTCH*STVTLL
Trigger: CAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CAA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTTTGGACCCCTGTGGATaGTCAAGGTTTACAGCTATG +
Preference number: 5 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFLDPCG*SRFTAM
Trigger: CATAGCTGTAAACCTTGACAATCCACAGGGGTCCAA...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTGAGTATGGTACCCTTTaGAGGATTACCAGTATGGAC +
Preference number: 5 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSEYGTL*RITSMD
Trigger: GTCCATACTGGTAATCCTCAAAAGGGTACCATACTC...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATTTGTGTGCTTTTTGCTaGGTGCGTAAAGGTGTCAAG +
Preference number: 5 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHLCAFC*VRKGVK
Trigger: CTTGACACCTTTACGCACCAAGCAAAAAGCACACAA...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATTTTTTGGTTTCTCTTTaGCCTTTCCCCATAGGCACT +
Preference number: 5 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDFLVSL*PFPIGT
Trigger: AGTGCCTATGGGGAAAGGCAAAAGAGAAACCAAAAA...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp CTACATCTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATAGGTACAAGTCACTGTaGTGTGGGATACAATCTAAG +
Preference number: 5 (lower is better)
Translates to: LHLSIYIVAPRQVAGLLDRYKSL*CGIQSK
Trigger: CTTAGATTGTATCCCACACAACAGTGACTTGTACCT...ATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAGATGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CAA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTTGCTTATTACAGCTTTaGCCCATTCCTGGAACAAGA +
Preference number: 5 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSCLLQL*PIPGTR
Trigger: TCTTGTTCCAGGAATGGGCAAAAGCTGTAATAAGCA...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTAGCTGCATAATAGGTTaGTGTGTACTTTCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFSCIIG*CVLSGW
Trigger: CCACCCAGAAAGTACACACAAACCTATTATGCAGCT...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTTCCATGCATTATGACTaGTCCTGCCATTTCTCTCAC +
Preference number: 5 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFSMHYD*SCHFSH
Trigger: GTGAGAGAAATGGCAGGACAAGTCATAATGCATGGA...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTATGGCTGGAATCAGCTaGAAACAGAACCTGAGTAAA +
Preference number: 5 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSMAGIS*KQNLSK
Trigger: TTTACTCAGGTTCTGTTTCAAGCTGATTCCAGCCAT...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp TCTGCACATGAGGTATTCTTCTACACTGATTTTTCATACAGGTGTGCTAGATTTGTCTGTAATTGCCATTaGAGTGTCCTTACAGCAGAC +
Preference number: 5 (lower is better)
Translates to: SAHEVFFYTDFSYRCARFVCNCH*SVLTAD
Trigger: GTCTGCTGTAAGGACACTCAAATGGCAATTACAGAC...AAATCTAGCACACCTGTATGAAAAATCAGTGTAGAAGAATACCTCATGTGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CAA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTAATGAGGGTAAGGCCTaGAAACTCTTGGAGAAATGT +
Preference number: 5 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSNEGKA*KLLEKC
Trigger: ACATTTCTCCAAGAGTTTCAAGGCCTTACCCTCATT...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS-3UTR CAA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATAGGTACAAGTCACTGTaGTGTGGGATACAATCTAAG +
Preference number: 5 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHRYKSL*CGIQSK
Trigger: CTTAGATTGTATCCCACACAACAGTGACTTGTACCT...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406925.6
ENST00000442995.4
ENST00000458412.2
CDS CCA 90 bp ATGAATAGAATTCTAAATCTTTGGTGGAAAAGGGCACAGGGAGTATaGTACCCTTTTGAGGATTACCAGTATGGACCAATTGGTAGTAAA +
Preference number: 5 (lower is better)
Translates to: MNRILNLWWKRAQGV*YPFEDYQYGPIGSK
Trigger: TTTACTACCAATTGGTCCATACTGGTAATCCTCAAAAGGGTACCATACTCCCTGTGCCCTTTTCCACCAAAGATTTAGAATTCTATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp CTATCTATATATATAGTGGCTCCTAGGCAGGTAGCTGGCCTTTTAGATATTCATTTCATCCTACTGCAGTaGGTGCTTATTACAGCTTTT +
Preference number: 5 (lower is better)
Translates to: LSIYIVAPRQVAGLLDIHFILLQ*VLITAF
Trigger: AAAAGCTGTAATAAGCACCAACTGCAGTAGGATGAA...ATGAATATCTAAAAGGCCAGCTACCTGCCTAGGAGCCACTATATATATAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS-3UTR CAA 90 bp CAAAATTCTAACTCAAGGTGGCCTATGAACTGGGTTCATAACCTACATCTATCTAACAGTGGGGTTATCTaGGTAACACAATCCTTTATA +
Preference number: 5 (lower is better)
Translates to: QNSNSRWPMNWVHNLHLSNSGVI*VTQSFI
Trigger: TATAAAGGATTGTGTTACCAAGATAACCCCACTGTT...AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CAA 90 bp CACACTCCCAGATCCAGATGCCCTCGGGGTTGTGTGCCCACCTGTTaGGCCTCTCTGACTGTCCAGTGCTCAGTGGCTCTGGGGCTGTGT +
Preference number: 6 (lower is better)
Translates to: HTPRSRCPRGCVPTC*ASLTVQCSVALGLC
Trigger: ACACAGCCCCAGAGCCACTGAGCACTGGACAGTCAGAGAGGCCAAACAGGTGGGCACACAACCCCGAGGGCATCTGGATCTGGGAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS GCA 72 bp AGTGCTCAGTGGCTCTGGGGCTGTGTACCGAGTATGTaGAGGAACCGCCACCTTCCACCTGCTGCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: SAQWLWGCVPSM*RNRHLPPAAGC
Trigger: ACAGCCTGCAGCAGGTGGAAGGTGGCGGTTCCTGCACATACTCGGTACACAGCCCCAGAGCCACTGAGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CCA 72 bp CCACTTGCAGCCGCCTGTTCTACATCCTCCTCCATGTaGGGGCCTCAGCAATCTGCTGCCTCCTGCTGTCAA +
Preference number: 6 (lower is better)
Translates to: PLAAACSTSSSM*GPQQSAASCCQ
Trigger: TTGACAGCAGGAGGCAGCAGATTGCTGAGGCCCCCACATGGAGGAGGATGTAGAACAGGCGGCTGCAAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS GCA 72 bp CCTGCCATTTCTCTCACACACACTCCCAGATCCAGATaGCCTCGGGGTTGTGTGCCCACCTGTTTGGCCTCT +
Preference number: 6 (lower is better)
Translates to: PAISLTHTPRSR*PRGCVPTCLAS
Trigger: AGAGGCCAAACAGGTGGGCACACAACCCCGAGGGCATCTGGATCTGGGAGTGTGTGTGAGAGAAATGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CCA 72 bp ACCCTTAGGCAGACAGGTGCAGCTCAAGACTGTAGCTaGTTCCTGGCTGTCCTGCTGGCCACCCTAGGATTC +
Preference number: 6 (lower is better)
Translates to: TLRQTGAAQDCS*FLAVLLATLGF
Trigger: GAATCCTAGGGTGGCCAGCAGGACAGCCAGGAACCAGCTACAGTCTTGAGCTGCACCTGTCTGCCTAAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CAA 72 bp TCTCACACACACTCCCAGATCCAGATGCCCTCGGGGTaGTGTGCCCACCTGTTTGGCCTCTCTGACTGTCCA +
Preference number: 6 (lower is better)
Translates to: SHTHSQIQMPSG*CAHLFGLSDCP
Trigger: TGGACAGTCAGAGAGGCCAAACAGGTGGGCACACAACCCCGAGGGCATCTGGATCTGGGAGTGTGTGTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CAA 90 bp TGCCATTTCTCTCACACACACTCCCAGATCCAGATGCCCTCGGGGTaGTGTGCCCACCTGTTTGGCCTCTCTGACTGTCCAGTGCTCAGT +
Preference number: 6 (lower is better)
Translates to: CHFSHTHSQIQMPSG*CAHLFGLSDCPVLS
Trigger: ACTGAGCACTGGACAGTCAGAGAGGCCAAACAGGTGGGCACACAACCCCGAGGGCATCTGGATCTGGGAGTGTGTGTGAGAGAAATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS GCA 72 bp TACATCCTCCTCCATGTGGGGGCCTCAGCAATCTGCTaGCTCCTGCTGTCAAGGACAGTAGTGGAAAGGGTG +
Preference number: 6 (lower is better)
Translates to: YILLHVGASAIC*LLLSRTVVERV
Trigger: CACCCTTTCCACTACTGTCCTTGACAGCAGGAGGCAGCAGATTGCTGAGGCCCCCACATGGAGGAGGATGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CCA 72 bp CTCCTTCCTCTCCATCGCTCCTTGCATCCGCCTCAGTaGGTACATGTCCTACAGCATTCCAGGTTTTGGGGG +
Preference number: 6 (lower is better)
Translates to: LLPLHRSLHPPQ*VHVLQHSRFWG
Trigger: CCCCCAAAACCTGGAATGCTGTAGGACATGTACCCACTGAGGCGGATGCAAGGAGCGATGGAGAGGAAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CCA 72 bp CTGGGGAGGTTTCTAGTATTACTACATGGAAAGGGCTaGGCAAAAGGCACGGCAGAGCACTGGTCCCACAGC +
Preference number: 6 (lower is better)
Translates to: LGRFLVLLHGKG*AKGTAEHWSHS
Trigger: GCTGTGGGACCAGTGCTCTGCCGTGCCTTTTGCCCAGCCCTTTCCATGTAGTAATACTAGAAACCTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CCA 72 bp GCAGTAGGCCTGTCCCAACCCCCTCTCATTTGGGATTaGTTCCTCCTTAGTTGTCTCGTCTGTCCTCTTTCC +
Preference number: 6 (lower is better)
Translates to: AVGLSQPPLIWD*FLLSCLVCPLS
Trigger: GGAAAGAGGACAGACGAGACAACTAAGGAGGAACCAATCCCAAATGAGAGGGGGTTGGGACAGGCCTACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS TCA 72 bp TTTGCTTGGTGCGTAAAGGTGTCAAGGGTGGAGGTATaGAAGGAGGGTGCCCAAGACAGGGAAGGATGGTCA +
Preference number: 6 (lower is better)
Translates to: FAWCVKVSRVEV*KEGAQDREGWS
Trigger: TGACCATCCTTCCCTGTCTTGGGCACCCTCCTTTCATACCTCCACCCTTGACACCTTTACGCACCAAGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CCA 72 bp GAGGCCTCCTACCTGGCTGAGGTATTTGGACCCCTGTaGATTGTCAAGGTTTACAGCTATGAGTTTCAGGTG +
Preference number: 6 (lower is better)
Translates to: EASYLAEVFGPL*IVKVYSYEFQV
Trigger: CACCTGAAACTCATAGCTGTAAACCTTGACAATCCACAGGGGTCCAAATACCTCAGCCAGGTAGGAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS TCA 72 bp TTCAAGGACAGAATCACACCCTGTGCCTGCCTGGCCTaGGTAAAATGGAACCCCAAACACCAGATATCTCTC +
Preference number: 6 (lower is better)
Translates to: FKDRITPCACLA*VKWNPKHQISL
Trigger: GAGAGATATCTGGTGTTTGGGGTTCCATTTTACTCAGGCCAGGCAGGCACAGGGTGTGATTCTGTCCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS GCA 72 bp GTGCTCCTATTCCACTATTATACACACCCAGCTGGCTaGCTGCTTAACAAGATGCTCCTCAGTCTGCACCTT +
Preference number: 6 (lower is better)
Translates to: VLLFHYYTHPAG*LLNKMLLSLHL
Trigger: AAGGTGCAGACTGAGGAGCATCTTGTTAAGCAGGCAGCCAGCTGGGTGTGTATAATAGTGGAATAGGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS GCA 72 bp CTGCTGTTCCTGTTAGGTCTCTGTGCTATTGCCTTCTaGATTCCTGATGAGCATCTCTTCCCAGGTACTCTC +
Preference number: 6 (lower is better)
Translates to: LLFLLGLCAIAF*IPDEHLFPGTL
Trigger: GAGAGTACCTGGGAAGAGATGCTCATCAGGAATGCAGAAGGCAATAGCACAGAGACCTAACAGGAACAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CCA 72 bp GAACTCTATTCTTTCTCAGCAATGAGGCCTCCTACCTaGCTGAGGTATTTGGACCCCTGTGGATTGTCAAGG +
Preference number: 6 (lower is better)
Translates to: ELYSFSAMRPPT*LRYLDPCGLSR
Trigger: CCTTGACAATCCACAGGGGTCCAAATACCTCAGCCAGGTAGGAGGCCTCATTGCTGAGAAAGAATAGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CAA 72 bp TTCTCAGCAATGAGGCCTCCTACCTGGCTGAGGTATTaGGACCCCTGTGGATTGTCAAGGTTTACAGCTATG +
Preference number: 6 (lower is better)
Translates to: FSAMRPPTWLRY*DPCGLSRFTAM
Trigger: CATAGCTGTAAACCTTGACAATCCACAGGGGTCCAAATACCTCAGCCAGGTAGGAGGCCTCATTGCTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CAA 72 bp TTTCCACTGGTGCCCATCTTGCAGCATGGCATTACATaGGCATCTGTGGAGGCTTTGCATTCATCCTACTGC +
Preference number: 6 (lower is better)
Translates to: FPLVPILQHGIT*ASVEALHSSYC
Trigger: GCAGTAGGATGAATGCAAAGCCTCCACAGATGCCAATGTAATGCCATGCTGCAAGATGGGCACCAGTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CAA 90 bp GTGCCCATCTTGCAGCATGGCATTACATTGGCATCTGTGGAGGCTTaGCATTCATCCTACTGCAGTTGGTGCTTATTACAGCTTTTGCCC +
Preference number: 6 (lower is better)
Translates to: VPILQHGITLASVEA*HSSYCSWCLLQLLP
Trigger: GGGCAAAAGCTGTAATAAGCACCAACTGCAGTAGGATGAATGCAAAGCCTCCACAGATGCCAATGTAATGCCATGCTGCAAGATGGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS TCA 72 bp GGTTGGGGGCAGGAGACAAATGAGTGGTCATACCCGTaGCAAGTAGGTACCTTTCCATGCATTATGACTTGT +
Preference number: 6 (lower is better)
Translates to: GWGQETNEWSYP*QVGTFPCIMTC
Trigger: ACAAGTCATAATGCATGGAAAGGTACCTACTTGTCACGGGTATGACCACTCATTTGTCTCCTGCCCCCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS GCA 72 bp TCCTATTCCACTATTATACACACCCAGCTGGCTGCCTaGTTAACAAGATGCTCCTCAGTCTGCACCTTTGCT +
Preference number: 6 (lower is better)
Translates to: SYSTIIHTQLAA*LTRCSSVCTFA
Trigger: AGCAAAGGTGCAGACTGAGGAGCATCTTGTTAAGCAGGCAGCCAGCTGGGTGTGTATAATAGTGGAATAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CCA 72 bp AAGCAATTATACTTACTCCCCAGAGCAACCCCGCTCTaGCCTCCTACAAGCTTCTGTCATCAGCTGCTATAT +
Preference number: 6 (lower is better)
Translates to: KQLYLLPRATPL*PPTSFCHQLLY
Trigger: ATATAGCAGCTGATGACAGAAGCTTGTAGGAGGCCAGAGCGGGGTTGCTCTGGGGAGTAAGTATAATTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CAA 72 bp GGCATCTGTGGAGGCTTTGCATTCATCCTACTGCAGTaGGTGCTTATTACAGCTTTTGCCCATTCCTGGAAC +
Preference number: 6 (lower is better)
Translates to: GICGGFAFILLQ*VLITAFAHSWN
Trigger: GTTCCAGGAATGGGCAAAAGCTGTAATAAGCACCAACTGCAGTAGGATGAATGCAAAGCCTCCACAGATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CAA 90 bp CTCTATTCTTTCTCAGCAATGAGGCCTCCTACCTGGCTGAGGTATTaGGACCCCTGTGGATTGTCAAGGTTTACAGCTATGAGTTTCAGG +
Preference number: 6 (lower is better)
Translates to: LYSFSAMRPPTWLRY*DPCGLSRFTAMSFR
Trigger: CCTGAAACTCATAGCTGTAAACCTTGACAATCCACAGGGGTCCAAATACCTCAGCCAGGTAGGAGGCCTCATTGCTGAGAAAGAATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CAA 90 bp TGGCAGCAGGTGTTGCCAGGAGGCCTTCTGCTAACAAGAGTAAAGTaGTGGCGCCTAGATCTGCAGGAATTGGTGATAAATTTGAAGAAC +
Preference number: 6 (lower is better)
Translates to: WQQVLPGGLLLTRVK*WRLDLQELVINLKN
Trigger: GTTCTTCAAATTTATCACCAATTCCTGCAGATCTAGGCGCCACAACTTTACTCTTGTTAGCAGAAGGCCTCCTGGCAACACCTGCTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498605.1
CDS CAA 90 bp GAGGCTTTGCATTCATCCTACTGCAGTTGGTGCTTATTACAGCTTTaGCCCATTCCTGGAACAAGAACTGGTAAGGGGCACATAACCCTA +
Preference number: 6 (lower is better)
Translates to: EALHSSYCSWCLLQL*PIPGTRTGKGHITL
Trigger: TAGGGTTATGTGCCCCTTACCAGTTCTTGTTCCAGGAATGGGCAAAAGCTGTAATAAGCACCAACTGCAGTAGGATGAATGCAAAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS GCA 72 bp TGCAGCATGGCATTACATTGGCATCTGTGGAGGCTTTaGATTCATCCTACTGCAGTTGGTGCTTATTACAGC +
Preference number: 6 (lower is better)
Translates to: CSMALHWHLWRL*IHPTAVGAYYS
Trigger: GCTGTAATAAGCACCAACTGCAGTAGGATGAATGCAAAGCCTCCACAGATGCCAATGTAATGCCATGCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CAA 72 bp CATTCATCCTACTGCAGTTGGTGCTTATTACAGCTTTaGCCCATTCCTGGAACAAGAACTGGTAAGGGGCAC +
Preference number: 6 (lower is better)
Translates to: HSSYCSWCLLQL*PIPGTRTGKGH
Trigger: GTGCCCCTTACCAGTTCTTGTTCCAGGAATGGGCAAAAGCTGTAATAAGCACCAACTGCAGTAGGATGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CAA 90 bp CATTACATTGGCATCTGTGGAGGCTTTGCATTCATCCTACTGCAGTaGGTGCTTATTACAGCTTTTGCCCATTCCTGGAACAAGAACTGG +
Preference number: 6 (lower is better)
Translates to: HYIGICGGFAFILLQ*VLITAFAHSWNKNW
Trigger: CCAGTTCTTGTTCCAGGAATGGGCAAAAGCTGTAATAAGCACCAACTGCAGTAGGATGAATGCAAAGCCTCCACAGATGCCAATGTAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS GCA 72 bp TCTGTGGAGGCTTTGCATTCATCCTACTGCAGTTGGTaGTTATTACAGCTTTTGCCCATTCCTGGAACAAGA +
Preference number: 6 (lower is better)
Translates to: SVEALHSSYCSW*LLQLLPIPGTR
Trigger: TCTTGTTCCAGGAATGGGCAAAAGCTGTAATAAGCACCAACTGCAGTAGGATGAATGCAAAGCCTCCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS GCA 72 bp ACATTGGCATCTGTGGAGGCTTTGCATTCATCCTACTaGAGTTGGTGCTTATTACAGCTTTTGCCCATTCCT +
Preference number: 6 (lower is better)
Translates to: TLASVEALHSSY*SWCLLQLLPIP
Trigger: AGGAATGGGCAAAAGCTGTAATAAGCACCAACTGCAGTAGGATGAATGCAAAGCCTCCACAGATGCCAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CCA 72 bp TTGCCAGGAGGCCTTCTGCTAACAAGAGTAAAGTTGTaGCGCCTAGATCTGCAGGAATTGGTGATAAATTTG +
Preference number: 6 (lower is better)
Translates to: LPGGLLLTRVKL*RLDLQELVINL
Trigger: CAAATTTATCACCAATTCCTGCAGATCTAGGCGCCACAACTTTACTCTTGTTAGCAGAAGGCCTCCTGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498605.1
CDS CAA 72 bp TTGCAGCATGGCATTACATTGGCATCTGTGGAGGCTTaGCATTCATCCTACTGCAGTTGGTGCTTATTACAG +
Preference number: 6 (lower is better)
Translates to: LQHGITLASVEA*HSSYCSWCLLQ
Trigger: CTGTAATAAGCACCAACTGCAGTAGGATGAATGCAAAGCCTCCACAGATGCCAATGTAATGCCATGCTGCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CAA 72 bp TCCCCACAAACAGGGACAAATTCTAAGAATAGTACTTaGTCAGATGATCTGTATGAGATGAAGGGGGTGGGG +
Preference number: 6 (lower is better)
Translates to: SPQTGTNSKNST*SDDLYEMKGVG
Trigger: CCCCACCCCCTTCATCTCATACAGATCATCTGACAAAGTACTATTCTTAGAATTTGTCCCTGTTTGTGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS CAA 72 bp ACAGAAAACAGGTTTAAGTCCCTGCTTCTCGTGTACTaGCTGTGTAACCTTGAGCCAGACTTTGTGCTTCTA +
Preference number: 6 (lower is better)
Translates to: TENRFKSLLLVY*LCNLEPDFVLL
Trigger: TAGAAGCACAAAGTCTGGCTCAAGGTTACACAGCAAGTACACGAGAAGCAGGGACTTAAACCTGTTTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS GCA 72 bp CTATTAAGTATCTTTGAGTTAGAATTTGGAATAAGGTaGAGTAGGCCTGTCCCAACCCCCTCTCATTTGGGA +
Preference number: 6 (lower is better)
Translates to: LLSIFELEFGIR*SRPVPTPSHLG
Trigger: TCCCAAATGAGAGGGGGTTGGGACAGGCCTACTGCACCTTATTCCAAATTCTAACTCAAAGATACTTAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406925.6
CDS TCA 72 bp AAAGTAGACATAGGCTGGGTAAAGGAAATTCCGGGATaGAGTAATAGCACTGTAAAAAGACAGAAAACAGGT +
Preference number: 6 (lower is better)
Translates to: KVDIGWVKEIPG*SNSTVKRQKTG
Trigger: ACCTGTTTTCTGTCTTTTTACAGTGCTATTACTTCATCCCGGAATTTCCTTTACCCAGCCTATGTCTACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406925.6