Pregenerated sensors for HYMAI (Homo sapiens)
Ensembl gene IDs: ENSG00000283122Ensembl transcript IDs: ENST00000635591.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGAATCGGGTCTGTGGACCTCATACCAGATAGGCGCGAACGCCTCTaGCAGCGGCGTCCAGGGGGTCCGGCGGCACTCGCGGTGGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: RIGSVDLIPDRRERL*QRRPGGPAALAVGL Trigger: CAGCCCCACCGCGAGTGCCGCCGGACCCCCTGGACGCCGCTGCCAGAGGCGTTCGCGCCTATCTGGTATGAGGTCCACAGACCCGATTCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635591.1 |
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| CDS GCA 90 bp | GGCATCCAGTTTTCTGCCATTACAGTCAACCTTCTTGTACACGTCTaGTTGTGGACATGTATTAAAATTTATCTAGGGCAGTGGCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: GIQFSAITVNLLVHV*LWTCIKIYLGQWLS Trigger: TGAAAGCCACTGCCCTAGATAAATTTTAATACATGTCCACAAGCAGACGTGTACAAGAAGGTTGACTGTAATGGCAGAAAACTGGATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635591.1 |
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| CDS CCA 90 bp | CAAAAATACTTCATTGGCCACTGTACAGTGTGCCCTTTTTATGAGTaGTGTATAATTTATCTTTCTCCTTCAGGTAGGCATGAAGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: QKYFIGHCTVCPFYE*CIIYLSPSGRHEGG Trigger: GCCGCCTTCATGCCTACCTGAAGGAGAAAGATAAATTATACACCACTCATAAAAAGGGCACACTGTACAGTGGCCAATGAAGTATTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000635591.1 |
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| CDS GCA 90 bp | ATTTGTGTTGAAACACAAAAATACTTCATTGGCCACTGTACAGTGTaGCCTTTTTATGAGTGGTGTATAATTTATCTTTCTCCTTCAGGT | + |
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Preference number: 5 (lower is better) Translates to: ICVETQKYFIGHCTV*PFYEWCIIYLSPSG Trigger: ACCTGAAGGAGAAAGATAAATTATACACCACTCATAAAAAGGGCACACTGTACAGTGGCCAATGAAGTATTTTTGTGTTTCAACACAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000635591.1 |
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| CDS GCA 72 bp | CGCCCGCCGCAGCCGCGAGCACCCAAACACCTACCCTaGGGGGCGACGACCCCCGGAGCTCAGGCGAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: RPPQPRAPKHLP*GATTPGAQARP Trigger: CGGCCTCGCCTGAGCTCCGGGGGTCGTCGCCCCGCAGGGTAGGTGTTTGGGTGCTCGCGGCTGCGGCGGGCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000635591.1 |
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| CDS CCA 72 bp | TCTGTGGACCTCATACCAGATAGGCGCGAACGCCTCTaGCAGCGGCGTCCAGGGGGTCCGGCGGCACTCGCG | + |
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Preference number: 6 (lower is better) Translates to: SVDLIPDRRERL*QRRPGGPAALA Trigger: CGCGAGTGCCGCCGGACCCCCTGGACGCCGCTGCCAGAGGCGTTCGCGCCTATCTGGTATGAGGTCCACAGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000635591.1 |
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| CDS TCA 72 bp | GGGAGAGAGATTCATAAAGCGAACACCCCTATGACCTaGGAGACACTGATGTTCTATTCTCCGTCTGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: GREIHKANTPMT*ETLMFYSPSVF Trigger: AAACACAGACGGAGAATAGAACATCAGTGTCTCTCAGGTCATAGGGGTGTTCGCTTTATGAATCTCTCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635591.1 |
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| CDS GCA 72 bp | AACAAAGAGTTACAAAGCAAACACCCATGTAACCATTaGACAGGTCAGGCGATAAAGCATTTCCAGCATCTC | + |
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Preference number: 6 (lower is better) Translates to: NKELQSKHPCNH*TGQAIKHFQHL Trigger: GAGATGCTGGAAATGCTTTATCGCCTGACCTGTGCAATGGTTACATGGGTGTTTGCTTTGTAACTCTTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635591.1 |
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| CDS CCA 72 bp | GCCATTACAGTCAACCTTCTTGTACACGTCTGCTTGTaGACATGTATTAAAATTTATCTAGGGCAGTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: AITVNLLVHVCL*TCIKIYLGQWL Trigger: AAGCCACTGCCCTAGATAAATTTTAATACATGTCCACAAGCAGACGTGTACAAGAAGGTTGACTGTAATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635591.1 |
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| CDS CAA 72 bp | GCGGCATCCAGTTTTCTGCCATTACAGTCAACCTTCTaGTACACGTCTGCTTGTGGACATGTATTAAAATTT | + |
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Preference number: 6 (lower is better) Translates to: AASSFLPLQSTF*YTSACGHVLKF Trigger: AAATTTTAATACATGTCCACAAGCAGACGTGTACAAGAAGGTTGACTGTAATGGCAGAAAACTGGATGCCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635591.1 |
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| CDS CAA 90 bp | GGAGCAGTTAAAACCATAAAGCAATTCTCGAATTTCAAAGAATTGTaGGCCTTGACACGTATGCTAACTACAGTGCAAATTAGAAATCAG | + |
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Preference number: 6 (lower is better) Translates to: GAVKTIKQFSNFKEL*ALTRMLTTVQIRNQ Trigger: CTGATTTCTAATTTGCACTGTAGTTAGCATACGTGTCAAGGCCAACAATTCTTTGAAATTCGAGAATTGCTTTATGGTTTTAACTGCTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635591.1 |
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| CDS GCA 72 bp | GAAACACAAAAATACTTCATTGGCCACTGTACAGTGTaGCCTTTTTATGAGTGGTGTATAATTTATCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: ETQKYFIGHCTV*PFYEWCIIYLS Trigger: AGAAAGATAAATTATACACCACTCATAAAAAGGGCACACTGTACAGTGGCCAATGAAGTATTTTTGTGTTTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000635591.1 |
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